LOCUS       DAWGKF010000001        38998 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.001, whole genome shotgun sequence.
ACCESSION   DAWGKF010000001 DAWGKF010000000
VERSION     DAWGKF010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 38998)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38998)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38998
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.001"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            394..762
                     /locus_tag="WHR07_000001"
     CDS             394..762
                     /locus_tag="WHR07_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system death-on-curing
                     family toxin"
                     /protein_id="HEZ2129283.1"
                     /translation="MIDGELVALIHQTVLADEAGLKGRADMACLDGALSRIANWRQYE
                     NLEDIYEIAALYAQAIAKAHAFPDGNKRTALLTMLTYLDLQGISIAADQGLDDLIVSL
                     AAGETDFKQLAETLRRLDKE"
     gene            1200..1691
                     /locus_tag="WHR07_000002"
     CDS             1200..1691
                     /locus_tag="WHR07_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4760 domain-containing protein"
                     /protein_id="HEZ2129284.1"
                     /translation="MFWQLTVVSVTAVIALGTIFINKKTSKQKATLDVILNDYQDAQF
                     VEADNHISPYIRGTAVDDNNARIDLYEIYQNKGGQWEKERGHLLTVINRHEFYACAIN
                     SGVLDEDLFKRLHCTNFIKLWNAVSPLVMKIREEERKDTIFRELEILVALWKANPLKA
                     SDL"
     gene            2050..2286
                     /locus_tag="WHR07_000003"
     CDS             2050..2286
                     /locus_tag="WHR07_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HEZ2129285.1"
                     /translation="MLRVQKWGNSAAVRLPADMLKQLDFKIGDALVAEVHNGELRVRA
                     ARRFRLADLLAEMEETPPRVEGWEILDDVGNEVV"
     gene            2288..2635
                     /locus_tag="WHR07_000004"
     CDS             2288..2635
                     /locus_tag="WHR07_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEZ2129286.1"
                     /translation="MYIPDKGDIFHLNFDPSSGKEIKGGRFALALSPKAFNRATGLVF
                     ACPISQGNAAAARSSGMISTLLGAGTETQGNVHCHQLKSLDWQIRKASFKETVPDYVL
                     DDVLARIGAVLFD"
     gene            complement(2688..3197)
                     /locus_tag="WHR07_000005"
     CDS             complement(2688..3197)
                     /locus_tag="WHR07_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129287.1"
                     /translation="MDILLKYWKPVGVLLLIVLIFTAWHFDRAEKYRMGREAAAAEIS
                     NRLKDGYIEQAKQARSAEQKAAAAFAERQTKLEEEKQNAEKTVAAMRLELNRLRHYAA
                     AQNRNRNLPATTTAATASDGASDSQGWLLFGQCAEKYAGLAETADGHAADLREWQAYG
                     HAVSSQRAE"
     gene            complement(3209..3682)
                     /locus_tag="WHR07_000006"
     CDS             complement(3209..3682)
                     /locus_tag="WHR07_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEZ2129288.1"
                     /translation="MQVTKNFSLRELTRSETARRAGVPNEPSPADMDNIYYTAQQLEK
                     IREYVGRPIIVTSCFRSERVNKLVGGSPTSAHRHGLAADCDASGMTSPAFAKLLIKMR
                     DEGALKFDQLILEFPERGDGAWVHIGFRRNSPQRNQILTATKKNGKTVYLPGLHP"
     gene            complement(3821..4096)
                     /locus_tag="WHR07_000007"
     CDS             complement(3821..4096)
                     /locus_tag="WHR07_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129289.1"
                     /translation="MKLLLILSAAPSLISAYLMICRLNGRKWSALSPEAWAYLAFLGG
                     AIYTFYIVFAYGLTPSLGKFMMDIAACVYFGSRSVRVVKWRHRHGLK"
     gene            complement(4093..4518)
                     /locus_tag="WHR07_000008"
     CDS             complement(4093..4518)
                     /locus_tag="WHR07_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129290.1"
                     /translation="MSEPIITPAAVYIFGGVVGAGYLLGMPVDAVVLGAVASAAVTMI
                     SEPKSRWMVVAYIVIGGLLGGAFAPPLTHFLIGEVVGSHPSLGEQRIQFAHAFAPVVV
                     GLLWQVLLRFARAVWPSFEKHADDIVEWLLNLLPWRPKK"
     gene            complement(4582..4992)
                     /locus_tag="WHR07_000009"
     CDS             complement(4582..4992)
                     /locus_tag="WHR07_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003757695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129291.1"
                     /translation="MVQTVFFYPKETIMSKDKNQITVGINREIIDTETDSSAEFHVIR
                     HVSLDYATGFNVVLLDSYVRKSTFERRGRSVGSMQLNIPGVPPRGTDVLDWAYQAVVA
                     AVEGGAVDAYGQPISANSLTGAELVYADLPEAAI"
     gene            complement(5244..5690)
                     /locus_tag="WHR07_000010"
     CDS             complement(5244..5690)
                     /locus_tag="WHR07_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129292.1"
                     /translation="MDQAKRTAYVKIINALFDGAVKVQPSQITETVVDMVDKMFDEIA
                     TCHERIRPMAVLADGIAGSIVKLAPNEIPLIFGNSSFGSYLKSKTRDEVFKVLKQSKV
                     NNAGKVLEAFYESWLKYTAKDRRLKVCIVTAQSRWRSRFEMELLGI"
     gene            complement(5761..10026)
                     /locus_tag="WHR07_000011"
     CDS             complement(5761..10026)
                     /locus_tag="WHR07_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEZ2129293.1"
                     /translation="MGGKSGGGQRTPYEAPNSLSSAQSLRIIDAVSEGVVSGFANGDD
                     APFKSVYFDDTPVQNSDGSYNFNGVTGYFQRGEQDQSYVPGFDASERTVAVSAAVKQN
                     QPMVRAVTDELVSRLRITVAVERNAQVEDNGDTVPADTLMRVELINSNGVQASNQVRF
                     NEKSSGTYYQDVEFDVVPQVPFNIRVFRISPDSKTDKVSNNTYFSSYVEIVDAKLSYP
                     HTAFAALSIDSAQFGNQIPRRNYLMKGRLVKVPSNYNPETRQYTGGTWDGSFKTAWTN
                     NPAWVFYDVLTQPRFSTLARRLNVADIDKWSLYQIGKYCDEPVDDGFGGKEPRFVCNA
                     YITDLMQAGEFLNNLASVFTGLPVWNGQQVSVVMDADADPVAQYTNANVKDGLFNYAG
                     AALKSIHTAVHVQYIDKYDGYRAKTEYVADNEAIARYGLNIKQITAFGCDSRGQAARF
                     GAWTLQTELRQQNAVTFEIGREGLKHLPYDIVQIMDNQYAGAELSGRVAAISGNVLTL
                     DRPVSDAVGALVFYSEGGSLKSAKITAAAGNKVTLEREVPLQAGDTWVLSGKVKPRLY
                     RAIGIKENTDAGTYTVTALLHDPKKYAAVDSFAHFDHEITTLHNTAPVLTDAAVNTDG
                     GTVVVTWDNLAANGQVLTYDIKIYRNNSLYRHIPDAQTAEIRLENLPNGNYRAEIRGR
                     NARGVLSAPLVKAWSIDYTVTGLRTTPKTLSVTVDWVLPQTVVSDLVFELWYSKTNNL
                     QTATKLASLAYPQNSYTLTGVGVADVYYFWVRIRDIAGNTGEFTAAVQGRADNNPAPI
                     VQQIQGAIGKSALSRELIDTLNRDMAAAAGLKVSAEAAERAKALQEEARARTAAIQAE
                     SSARTAELARKSSEIGTRIAATEAVNEQQAQQIQTVTSAQGNTAAGLEAEKKARTDGD
                     RAEAQARETLAVRLGNAESGISALRETVTRQDAARSSEINTLTAKLENVEVGGRNYAL
                     STGTAGKVLTASENNQTKTVTIDVSSALDLKQGDSLIISCDIELVNATSPHGKPYPRI
                     GAEFSVIYADNSVGYFAAWYGEAVSGTTKTLKQRIVAKHTVAKEVKALRSFIVQARYQ
                     TSESIKVSNVKLERGTVATDWSPAPEDSNADTSALTTLSAKVQQASSAVAEIGGKIQS
                     LYTLKTEAIAGGRRAVAGVAVGADGKTGSGEILLMADKVAYVDPKDKTVTPAFVTVIE
                     NGKAKQALNGDLFATGSILAKHIAANQTIEAPTLNGATVNAGLIKGGTIRGARIEAVD
                     LEAANIIGDVVAVRTFELKQSPLGYQELICQIPDSRKTRRTVIVPPVFAVAENGAVVS
                     LQLHMDGVIQREVTIQSPEKRIARNEKFSVWVPGPPPLYIRTPQEVPLSFSVPFHLPK
                     TGSISFQKGIDGAAHSLHILCRISGNFDYSPLGDLSGIVCLIV"
     gene            complement(10162..10884)
                     /locus_tag="WHR07_000012"
     CDS             complement(10162..10884)
                     /locus_tag="WHR07_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003757687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HEZ2129294.1"
                     /translation="MITVCLYGGLREYGRRFVLHVETPAEALHALFTQIKGLRQRIRD
                     GVYQVRFDGKDQSEETIGSVFRRPADGVLHIVPRVQGAGKNGGLIQTIVGVVLIVVGA
                     YTSWASGAQLIAVGIGMVAGGVAQMLTKQPKLDADGKGVEESKNSAFSNLANTTAQGR
                     PVPLAYGLCYCGSRVVSQGVQSRRIEPSSTAASSGAVLNLGLSKTFVQGVAATAPNGQ
                     KYRTDFSDDSVRARNYKAAFSG"
     gene            complement(10881..11636)
                     /locus_tag="WHR07_000013"
     CDS             complement(10881..11636)
                     /locus_tag="WHR07_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003757685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEZ2129295.1"
                     /translation="MMDLDLLSEEARREMLACAEEAVPSEMCGVLVFSYEGYEFLPLS
                     NCAENPHETFEISADDWMAAERVGEIVAVVHSHPRGEPFLSGADRWMQVETGLPWILV
                     TQGRLKLFRPVPHLRGRVFEYGKTDCGALVRDAFMLMGLVFPDHPRGDMDEDAAAGFW
                     EKHLENCGFSRVSDGLCAGDVVLTATGGHASHAVLYLGNDWMLHHAYNQLSCRVPYTR
                     YWADVTHSVWRHPDFEPAMMQALENDFTHMEQA"
     gene            complement(11633..12334)
                     /locus_tag="WHR07_000014"
     CDS             complement(11633..12334)
                     /locus_tag="WHR07_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015971142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HEZ2129296.1"
                     /translation="MSGVMLQALSAAQQDVLVDLWQVDLRPLGGRVFYFCNQVNERGT
                     AVVWQGQAYEPYPIKADGFESTSQGAGNRPTLTVSNLLGLITGAADQFGQLVGVLVVR
                     RQTYAKFLDAVNFQSGRNPTADPMQEVVGKYLVERMTALNAETATFELAAPSESDGSV
                     IPARIMLANTCCWQYRGEGCGYTGRAVADRFDMPTDDASKDVCSKTLTGCRARFGATA
                     VLPFGGFPSSDKVTT"
     gene            complement(12415..12684)
                     /locus_tag="WHR07_000015"
     CDS             complement(12415..12684)
                     /locus_tag="WHR07_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEZ2129297.1"
                     /translation="MTETFRWRVASDNKAVHKFDVRSVRFGDGYEQRQPKSLKPKLRS
                     WEIKIVGQKALMGEIKAFFDARRGVEPFNWRPPDGVPVLVKVSEY"
     gene            complement(12706..15924)
                     /locus_tag="WHR07_000016"
     CDS             complement(12706..15924)
                     /locus_tag="WHR07_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail length tape measure family protein"
                     /protein_id="HEZ2129298.1"
                     /translation="MNNETKIYITAETGGVVSGVEKAKQSIKSLGDVASSQGRRISDG
                     LVHSGDGAEKSSTVVSAASKRTERSLASLENAIRRDIAVKIAGGKANREYYEELARQR
                     GIDIARLNPLLSQLDRHNTQTNRATQSVKQFNNALRQTPAQITDIVTQLAGGQSPFLI
                     MIQQGGQLRDMYGGFGGMLKGLATVISPMRLAVAGLGGGIAALGYAMYQGAEESCEYR
                     KALILAGDAAGITADRMQEIAVSVGAATGGYADARAAITALVSSGKVATDNYEQFARS
                     ITLQSQATGQSIDDLVEKYTEIAKDPLKAVVSLSATYRTMTADVYQQVKALQAQGREQ
                     DAVALVQRKFSEESEDMAKRVLGNLGLIERAWKDIKESASEAWDAVKSIGRDKTKLDE
                     IAALDSFISQIETSKKHPVTQLFWGEEGERKLQEAYARRARLRAEIDKEAAAAETLRQ
                     KQKQNQNRTEGIAELEAVSERYATREQQRQRELLKNDKARKKALDGITDAKKRQEIIN
                     KHAANAKLINESFAEKKHERQKEKTDKTSYPTVSNGLRIKPGAEAGGKALGGTYAFAH
                     AMQQMLGDRLFRFGAFRDRYHIGKNSLHNSGLAFDATPSPGMGMKQKQEVVAQMTRYL
                     ESLGFKNGQDFNLKLELAGQRNKNGTVATGDHWHFNWRSREAAARFAGGVEGQVKNMA
                     HLGLFKGVEKEPLSGYEKWHEDFNRRAAEAGAKRVLEILNGNRAIGEQLKLLSDPTFG
                     DWTLKQQADARELAEKADAQDSLTAASKKYSDIVKQMTDDSKEKLDDRLFEISLIGKT
                     REEIEKLTLARLWDRQIAKAREEGAPLESIDLLERGKAEGMSNLSQMQKARADSDNDW
                     RGGIESGLKSYIDSFGTMRQAMENATVQTFDKMGDALADFVATGKLDFRSLTVSILQD
                     LSKMLIKMAIVNAMKSALGYADGGIVGGGSTQFDALFSGGGYTGYGGKYEPAGIVHKG
                     EVVFSQRDVRNHGGVAAVERLRLNGYAGGGAVGLPSVLTGVRSAGAGSMQVNITINRD
                     GSTESDSSADTEMAKHLAAAIPGMVEQWYVKNVYRENGTYHK"
     gene            complement(15917..16189)
                     /locus_tag="WHR07_000017"
     CDS             complement(15917..16189)
                     /locus_tag="WHR07_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1799 domain-containing protein"
                     /protein_id="HEZ2129299.1"
                     /translation="MNVFGFSADDFSEKETTFGVWPCNWQAVQLFIGVSTQWRIGMSG
                     ATGLDYSAVAAVMECGNIKSKKRKALLEKVRLMELEVLSMWAGEHE"
     gene            complement(16237..16548)
                     /locus_tag="WHR07_000018"
     CDS             complement(16237..16548)
                     /locus_tag="WHR07_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly chaperone"
                     /protein_id="HEZ2129300.1"
                     /translation="MAKLTLKPDATFRHTVKIPVPGAEPADVEFEFKARGRKAMKEFT
                     EKHKDGWTADTVLDCVQGWDLEEAFDRQNVEILLDSYPMAVFAIVNGYVEEVFNAREG
                     N"
     gene            complement(16612..17253)
                     /locus_tag="WHR07_000019"
     CDS             complement(16612..17253)
                     /locus_tag="WHR07_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEZ2129301.1"
                     /translation="MAVKLPNGATVHIATALAAEKKATVATNAAECVLTVAGHGFANG
                     DLVLFKSGWGKLNERVFQIGDVKADTFKLTGIDTSNADEFPAGSGIGAVQKITDWVQV
                     SQIVEFSTSGGEQQYVDFGFLEDDFDQQIPSTKSAMSMSIKIADDTSLSGYKAAAKCS
                     DKGGKWPLKVVLKGGGLICYNGYPSMNKTPELVRNQVMAVTLSYAISGEVNRY"
     gene            complement(17285..17704)
                     /locus_tag="WHR07_000020"
     CDS             complement(17285..17704)
                     /locus_tag="WHR07_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003757674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129302.1"
                     /translation="MTSRLTEIRNAATDVLKTKFQRVYSGRGFAPAQSQLPCVVVYVD
                     RRRTEQETFDFPPTYRHTVRLVTLVCVQAASGADELAEEMLSLIGQLFAEHSDLGVGD
                     LENLVPDLLNIDSDESGEAVTVYYQQGWQAIYFDTAV"
     gene            complement(17685..17987)
                     /locus_tag="WHR07_000021"
     CDS             complement(17685..17987)
                     /locus_tag="WHR07_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129303.1"
                     /translation="MFNEPLNVFTNPADFGETVMIGGKEVNAIFDREFITDSGFGVAV
                     ANADPQIIVTEDDLPEDVKSVVVTVRGKRYAVAETDFDGCGMVVVQLRAIHDKPTY"
     gene            complement(17980..18207)
                     /locus_tag="WHR07_000022"
     CDS             complement(17980..18207)
                     /locus_tag="WHR07_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129304.1"
                     /translation="MAKIKIIPTRSFFDGEQTFATGKKYSVDESAAAVYIREGWAAEA
                     PAKEAESPVADGGEAEDSGNASGEGGEDGSV"
     gene            complement(18265..20157)
                     /locus_tag="WHR07_000023"
                     /pseudo
     CDS             complement(18265..20157)
                     /locus_tag="WHR07_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245550.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
     gene            complement(20138..21700)
                     /locus_tag="WHR07_000024"
     CDS             complement(20138..21700)
                     /locus_tag="WHR07_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HEZ2129305.1"
                     /translation="MAKQSNAAPKKRGFFARLFGRREAVPKTARRNFAGARPVGSLAS
                     WQPQNWSADALARSDLDRLRTRARSLARDNDYMRKFLNMVESNVIGRDGFALQMRVLL
                     DNADKPDALANKAIEAAFSRWARRGVCDVTGQMSFTDLQRLLIRSVARDGEVLIRHIS
                     GFDNDYGYALQVLDIDRLDTGYNVPQQNGRNAVRMGVELNSYSRPVAYWLRTAHPGES
                     YGQTNTGNLRERVPAEQISHIFLHDRPEQRRGFPWVASAIIGLQNLSGYQEAAIIAAR
                     VGASKMGFFKQTEDADNFMPPIDGQEVDNGRGSIDLIDSVEPGTFHELPQGYDFTPFD
                     PDYPHANYDAFVKASLRGIASGLNVAYHSLANDLEGVNFSSIRSGTLEERDTWMTLQN
                     WFADAFLYDVFDRWIEAALLMGAIKMPSGKSLPAGKLDKFKACNWQGRRWSWVDPLKD
                     INAHKEAVALAVKSRRDICAEMGLDFEDVITQIEQENQMLAGKGIIADVKPAASAAEP
                     ESEDNPNEENEA"
     gene            complement(21709..21963)
                     /locus_tag="WHR07_000025"
     CDS             complement(21709..21963)
                     /locus_tag="WHR07_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129306.1"
                     /translation="MSGHDYAVELEEAREILNSLRKAYKEHAAGRGMTKRYKIKDREM
                     EFSSLADLLKQIRFWQQEIKRLEAAAGVSPRRSGRIITRF"
     gene            complement(21950..22336)
                     /locus_tag="WHR07_000026"
     CDS             complement(21950..22336)
                     /locus_tag="WHR07_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3310 domain-containing protein"
                     /protein_id="HEZ2129307.1"
                     /translation="MEKQDNITPPHYRSRAVECIEFTERLNFCMGNAFKYVWRHREKN
                     GAEDLKKARWYLQRQLDSCAVMHLLEPEEYAELMDGLEKCELDDLMQHVLEEILYHAF
                     FESEDSLLAAMCGVSELLKGYGDERT"
     gene            complement(22339..22548)
                     /locus_tag="WHR07_000027"
     CDS             complement(22339..22548)
                     /locus_tag="WHR07_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129308.1"
                     /translation="MYDVFKTRAAELSGAFCSLDFWLCHKFVPLCHALCHFLTRRDID
                     TLIEEGLVEERFEQGVSKFYAKEAV"
     gene            complement(22565..25411)
                     /locus_tag="WHR07_000028"
     CDS             complement(22565..25411)
                     /locus_tag="WHR07_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEZ2129309.1"
                     /translation="MNKKYATKAEINAAAHDRWREVLEACGIPSEILDKKHHPCPSCG
                     GSDRFRFTDGSGSSRGSGVWICNQCKPEGGSPFDLLMDVCGYSFNEARDKVASLLGLA
                     HGDLVDKAPKLLPPPAPVKEEERDLWKPIVPVPEYALNSMSFGNGFRKSDDLIFKSVF
                     RDSSSAVLGGVARFRKSDGGKIDLPYTFCEHKKTGEKMWRWRCWDNPRPLYGLDSLVA
                     DPSLPVLVVEGEKCKNAADAQGYNYAVLTWHGGCNNWDKSDWSAVVDRDVVLWPDCDS
                     LRQKLTKKDRDDGVDPESKPFLPRNEQGGMKAMLGIAEVLTKQNCRVWLVNIPAPGIW
                     PHGFDIADAIADGGRICDPSEVLSWMGAADWLVEYVPEAEMPSENSPAPIQDMEPESE
                     QLHESLEATGNQGGAGDVDDEYLAKLQKLKSEFGLVEGKDHGVNRKTGVTYTRKAMTV
                     HFGKDVVDAWYEWGRAPVLTMYEINRLKKDYALIQAVKDDDTQDMMERFIYLDGSASI
                     WDNKLWRVVPEKAARLSMTPDGFKIWVNSPSRIVKRFDRLVFEPGRVLSDDYINIFRG
                     MPIEPKFPIPKEDMPETNYELYRLFPEIKPILNLINHLCNGDYQQVEYILNWLAYPLQ
                     NVGAKMTTAVVMHGHIHGAGKSFFFEEIVKPMYGEYGATYGQEDLESNYTANRSGKMF
                     GIFEEVYTNQQKYNKTGSQKHMITGKTMRVERKFQDAYEEANHMNCVFLRNESHPFKI
                     EENDRRYFVVWPEKKLDKKLRDEVLDCIGNDGVRLFYSFLLCWNFYLTYGQQGAENEK
                     GYEVIKLEEPVRFDPNTPPPMTAAKQNVISYGRYAWQTFYSEWAGGGIKDLPFCCCIT
                     DDLWLVYKEWCRQNGERETGKTKFLQHIAEKMPRARRWWRTKNKDGDVSCQNWIFKPA
                     GWQAADGLPEMDALGNEVLRFRSAGWRYRGGEEV"
     gene            complement(25526..25873)
                     /locus_tag="WHR07_000029"
     CDS             complement(25526..25873)
                     /locus_tag="WHR07_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129310.1"
                     /translation="MNRTKTCKECGEIKPITAFPKNGFDRKTGLQKYAPRCRRCHNVY
                     QQDLLYKRREKEFEQKQAVMAALMDAEREKEEAAKARSIAQSLVLAKAACPILHIGLW
                     TEPLFIPQGMLQI"
     gene            26273..26989
                     /locus_tag="WHR07_000030"
     CDS             26273..26989
                     /locus_tag="WHR07_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ2129311.1"
                     /translation="MTMHETTDRLFEIAKEQGVLKPADIAERLNISQQALKNWESRGI
                     AAKALPEVAKAFGVSETWLRTGEGSRTAPVLIDPDLPHEVKDIHRPMTWSSNDPLPDD
                     DYVFVPYLKESCFKGGVGTYEIPDYNGYRLPFGKSTLKRKGINPDNVFCCTLTGDSME
                     EKIAEDAAIAVDTGETAIRDGKIYAFAQDGMFRVKYLIRQPGNSVLIRSHNSGFYGDE
                     NAPLDSLTVIGRVFWWSVLD"
     gene            27092..27517
                     /locus_tag="WHR07_000031"
     CDS             27092..27517
                     /locus_tag="WHR07_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129312.1"
                     /translation="MNFLGVQGELKVHELHHRTATLCFEWLGEVSAPRRKENYKDLKP
                     NVLYDFDGSGKHFANPDARYLLPVGSSGLILKHIQIDDEDTLLRLWCARNIPMPHRLS
                     KIPMLRQYYLSKAWHEIYAINQHLRKTKLIVDVAYGPTD"
     gene            27748..27948
                     /locus_tag="WHR07_000032"
     CDS             27748..27948
                     /locus_tag="WHR07_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129313.1"
                     /translation="METITIPKENFDALLNLARTAVALNENFIPKINYGASTIPAAGF
                     AALNEFGIARSTVESLEILKIK"
     gene            28016..28375
                     /locus_tag="WHR07_000033"
     CDS             28016..28375
                     /locus_tag="WHR07_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129314.1"
                     /translation="METQEKKFVPASKQIPTVNSGWLDRELGEAMSEAVRACLAHGKQ
                     SEITVKLKIQPQNIQSGTVKISHDVATKLPKEKREGGIVFATPDGNIQADDPAQGKLK
                     LKQVPNTSSTLKMVRSN"
     gene            28400..29254
                     /locus_tag="WHR07_000034"
     CDS             28400..29254
                     /locus_tag="WHR07_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdQ family protein"
                     /protein_id="HEZ2129315.1"
                     /translation="METQENMIKTALQAAQKPFFEFAPNNTLLVFTPDQDGGWRYKSH
                     PELMQNPYRKCGKFLMHDTASLIKFVQKHKQDGTQIYIDADFKSGRIDVTAVINGHTQ
                     QAPGWLDFYAVYTPQHTTSASNWLNNNAHRMNQMEFSHFLTNNARNIVSKNPGNENSV
                     YPTAAEVLDFALNLEYTEKTTFKQGYREQDGRINFTFQSEDSGQTEKNLKMFERFGIE
                     FTPHQGGASYFVEALLKFRIDKNSGALVLWYELQQIDAVIEQAAKDISEAVQKAFPEI
                     DIYFGIIA"
     gene            29326..29541
                     /locus_tag="WHR07_000035"
     CDS             29326..29541
                     /locus_tag="WHR07_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129316.1"
                     /translation="MTITEEYSIDIRVTAEQGKNDYGYPTERYGCDIINTDGELLVGI
                     EPEYKTPFAAVRKALICLAKDNLKNAA"
     gene            29577..29837
                     /locus_tag="WHR07_000036"
     CDS             29577..29837
                     /locus_tag="WHR07_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129317.1"
                     /translation="MKYLIRTALLAVVAAGIYACQPQSEAAVQVKAENSLTAMRLAVA
                     DKQAEIDGLNAQIDAEIRQREAEELKDYRWIHGDAEVPELEK"
     gene            29834..30127
                     /locus_tag="WHR07_000037"
     CDS             29834..30127
                     /locus_tag="WHR07_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129318.1"
                     /translation="MNFQEENENIKNDIEINLLHSAEADSVEAMMDLAVYGLAAMVAK
                     HNKTRGEQLVLQAIAGHMRKLLAALPETESLVQTGKVYRRLEDLIFKTYLPEQ"
     gene            30130..30321
                     /locus_tag="WHR07_000038"
     CDS             30130..30321
                     /locus_tag="WHR07_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129319.1"
                     /translation="MNTNQDTIPFGGNLVICCSTGNGGDGRFSCLITDQIPDLNLVRS
                     GQAFPMFIYEYETREKRKA"
     gene            30321..30461
                     /locus_tag="WHR07_000039"
     CDS             30321..30461
                     /locus_tag="WHR07_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate dehydrogenase"
                     /protein_id="HEZ2129320.1"
                     /translation="MDTLLKIIIALSFSGAEALAVWLFITAADAVLRRFPKPSHYRRV
                     KK"
     gene            30458..30667
                     /locus_tag="WHR07_000040"
     CDS             30458..30667
                     /locus_tag="WHR07_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate dehydrogenase"
                     /protein_id="HEZ2129321.1"
                     /translation="MNINELGARIDRPTIRELIAYATCRNRPISNSTLLRMEKDGRIP
                     CRLKTPLTSPVWDTREVLEALGLQQ"
     gene            complement(30725..31642)
                     /locus_tag="WHR07_000041"
     CDS             complement(30725..31642)
                     /locus_tag="WHR07_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KilA-N domain-containing protein"
                     /protein_id="HEZ2129322.1"
                     /translation="MNVSVLNFGNTPVSFRQDGFLNATAIASHFGKLPKDYLKSEQTQ
                     QYISALAENLSVRRKILTEANQIVIVKRGGSEQGTWLHPKLAIHFARWLNPKFAVWCD
                     EQIEILLNGKISDGIKTVTPKPTRALPDGLTGEQIEAVKKLHNALTKSAPKEAQARIA
                     ITLWSAVKSKFGCSYKEVPAEQFPEVLSVMSRVAVENGVLYGEVLDREPLPAPQPALP
                     ISGNALYDLAVAVRYGAWAIQMGRDVSLPLKQLGCKQAVTMWTVWAETRSRLKAAANA
                     LEALNAHADAEHAAKIRPMLPEIRNLSSV"
     gene            complement(32508..32987)
                     /locus_tag="WHR07_000042"
     CDS             complement(32508..32987)
                     /locus_tag="WHR07_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4760 domain-containing protein"
                     /protein_id="HEZ2129323.1"
                     /translation="MTDNLIQIATPILTVIGVFVAAYGIMRNTENAKKRATIDMIMAE
                     RNNAALQEAITIVNGLAKTDGCILATYTSDTPDKKKDREAILTVLNQREFVCAGVLGG
                     ALHEKMYKDFEYSMLLRDWDNLSSFIFEIRRIRSAPTAFQEFEAVARKWKKKPLKTK"
     gene            complement(33423..33803)
                     /locus_tag="WHR07_000043"
     CDS             complement(33423..33803)
                     /locus_tag="WHR07_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEZ2129324.1"
                     /translation="MPLKFQPRERSVIMCDFRGYEEPEMVKKRPVVVIARNRHNGKLV
                     TVVPLSSTEPVPLADYHHKMSGNPLPDKPHIQCWAKCDMTATVGLARLDRYKPKGRDR
                     CIPIISEEDFQAIKTAVAKAFKLY"
     gene            complement(33958..35154)
                     /locus_tag="WHR07_000044"
     CDS             complement(33958..35154)
                     /locus_tag="WHR07_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HEZ2129325.1"
                     /translation="MAKIITPLSANQVKNAKPRDKLYKLSDGGGLALWVYPTGGRSWK
                     LSFVQDGRQQTISLGRYPDFSLADAREWREEVRRKRAHGENVVNKKVRADFAFEKVAR
                     DWFVRWSKGRSEKYAGQVMRNFERWVFPAIGNLDIRQVRTADVVGCLRVMEARGIVDT
                     LRKTKNSLKMVFAFAVGSGMMEINPVAQIGSGVFERAKTGNMAALSPSELPRLIDFLE
                     QRNEFAVYAGRVRIHPVTRLCIYWLLLTMTRIQEAALMEWSELDGEVWRIPAERKKER
                     RGHDVPLSRAMQWVLDQARALNVNGRFVFESVNFQGHINKESPRVAMQRAGLDTTAHG
                     LRLLARTYLREVLKVDNDVAEKLLAHSLGTRTQTAYNRSELWEERKDALERWGNDVLR
                     LAKNGK"
     gene            complement(35346..35435)
                     /locus_tag="WHR07_000045"
     tRNA            complement(35346..35435)
                     /locus_tag="WHR07_000045"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(35399..35401),aa:Ser,seq:cga)
     gene            complement(35513..35603)
                     /locus_tag="WHR07_000046"
     tRNA            complement(35513..35603)
                     /locus_tag="WHR07_000046"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(35567..35569),aa:Ser,seq:tga)
     gene            complement(35686..36465)
                     /gene="yaaA"
                     /locus_tag="WHR07_000047"
     CDS             complement(35686..36465)
                     /gene="yaaA"
                     /locus_tag="WHR07_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HEZ2129326.1"
                     /translation="MFFVLSPAKNLNEKDPAPVSEFTQPDLLAESDILMQQLRELAPQ
                     QIAELMHVSDKIALLNAQRNAEWNTPFTPENAKQAVFMFNGDVYEGMDANTLNTDQIQ
                     YLQGRVRLLSGLYGLLRPLDLIQPYRLEMGTAFANLRGKNLYEFWGDIITNLLNDTLA
                     QAGSNTLVNLASQEYFKSVNTKTLRARLITPIFKDEKNGKYKIISFYAKRARGLMVRY
                     AAEHNITDPEMLKNFNYEGYAFNDAASNESEWVFMRSEQIK"
     gene            complement(36727..37914)
                     /gene="dapC"
                     /locus_tag="WHR07_000048"
     CDS             complement(36727..37914)
                     /gene="dapC"
                     /locus_tag="WHR07_000048"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyldiaminopimelate transaminase"
                     /protein_id="HEZ2129327.1"
                     /translation="MNTLLNQLKPYPFARLREAMQGISAPEGLEAVPLHIGEPKHPTP
                     KVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTLNSDTEILPVLGSREA
                     LFSFVQTVLNPVSDGLKPVIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSI
                     SEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNK
                     PLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSA
                     MSIPVQRASIAAWNDEQHVIDNRRLYQEKFEWVIPILQQVFDVKLPDASFYIWLKVPD
                     GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAEDIVS
                     LYR"
     gene            complement(37990..38442)
                     /gene="dut"
                     /locus_tag="WHR07_000049"
     CDS             complement(37990..38442)
                     /gene="dut"
                     /locus_tag="WHR07_000049"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEZ2129328.1"
                     /translation="MNIEVEMKVLDERMADVVPVYATKGSAGLDLRACLDEEVVLQPG
                     ETFLVPTGLAIYLANPAYAAVLLPRSGLGHKHGIVLGNLVGLIDSDYQGELKVSLWNR
                     SSEPFTVKPFERIAQMVVVPIVQARFKRVEEFVGSSRGEGGFGSTGLH"
     gene            38585..>38998
                     /locus_tag="WHR07_000050"
     CDS             38585..>38998
                     /locus_tag="WHR07_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HEZ2129329.1"
                     /translation="MTHISSPRNEFIRGIKESSPMLIGLLPWALILGMQGGQKGMSWL
                     EMLLMTGMNFAGGSEFATVNLWAEPLPILLIATVTFMINSRHILMGAALAPHLKEIPL
                     KKAVPALFFMCDESWAMAFSEIQKRKAAGLPAFNMP"
BASE COUNT         9709 a        10744 c         8974 g         9571 t
ORIGIN      
        1 cttgaacaaa aaagaaccgc cctgattcag ggcggttatg ttttctggcg gaaacggtgg
       61 gattcgacta aattttattt cattgattta aatatattta tttcttatga aaatttaatt
      121 taccataaaa acagccatat acaaaaatct tggagtaact attgcattac actattagaa
      181 gaatgccgtc tgaagtgttt tcggacggca tttcccaagc tgccggaaaa aagctaaaat
      241 gcccgcaaac agacaaggag cagcgatgca aaaccaaaat acacgccccg tcaaaatcga
      301 gcttaaaggc gaagcaggca aacgcgtact gcttgccgcc gcccgccgca ttgccaaaac
      361 ccatcaaaaa gccgtcaagg cacttgccga caaatgatag acggcgaact ggtcgcgctt
      421 atccatcaaa ccgtattggc ggatgaagcg ggtttgaaag ggcgggcgga tatggcgtgc
      481 ttggacggcg cattgtcgcg gattgccaac tggcggcagt atgaaaacct tgaggacatc
      541 tacgaaatcg ccgccctcta tgcacaagcc atagccaaag cccacgcctt tcccgacggc
      601 aacaagcgca ccgcgctttt aacaatgttg acctatctgg atttgcaggg catcagcatt
      661 gccgccgacc aagggcttga cgacttgatt gtcagtttgg cggcgggaga aaccgacttc
      721 aaacagctcg ccgaaaccct gcgccggctg gataaggaat aggcatatcc gacaacaatg
      781 ccgtctgaaa ttcagacggc atttttattg aaaggctttt ttgcaaccgc tttacacaaa
      841 ggcggttttt ttatgccgtc tgaaagccct tcagacggca tttgtttaca cggcaggagt
      901 ccccccgcct ttaagcagga gaggatgtca aggatgcctg atttttaaat caccccttga
      961 aagaacgggc gcacggcatt aatatacaga tatcgacaag caaggttaca accattaagg
     1021 aaatacgatg aaatacaaaa atgagggttt taatggctgg taaggtgcgg aaacaaataa
     1081 aacaaggagg ttggttgtca gtaattgccc taacctcctt gtttgtatct gtattcactt
     1141 tattttacat attcaggcac agcgtacagt ttaacctatg ggggacggcc gaatggctga
     1201 tgttttggca actgaccgtt gtttcagtaa ccgccgtcat tgcactgggg acaatattca
     1261 tcaataagaa aacttcaaag caaaaggcga cattagatgt tattttgaat gattaccaag
     1321 atgcacaatt tgtagaagcc gacaatcata tttcgcctta tattcgcggc acggcagttg
     1381 acgacaacaa cgcgcggatc gacctgtatg aaatttatca aaataagggc ggacaatggg
     1441 aaaaagagag agggcattta cttaccgtaa tcaatcggca cgagttttat gcgtgcgcaa
     1501 tcaactcggg agtattggat gaggatttgt ttaaacggct gcattgcacc aacttcataa
     1561 aattgtggaa tgcagtttcg cctcttgtta tgaaaatacg cgaagaagaa cgcaaagaca
     1621 caatatttag agagttggaa attttggttg cattatggaa agcaaacccc ctaaaggcat
     1681 ctgatttgtg aataaacagt caaaactgtt ctgaaatatg ggcagccacg caatcgccga
     1741 aatacgccaa agcagcctta taaagtgatt ttttgaacat aattttctcc ttgcggagca
     1801 ttttccaatc aaacagtttt agtttacttg gttttgtatc cctaaacaac cgaaatccga
     1861 catcaagcaa ttagaaagct tttgcatctt gaaaatggat aacaaaatat tgcctgaagg
     1921 cgcaaataca gtacaaaagc cgtccgaaac agttcggacg gcttttggcg tattctgcac
     1981 aagtatttga acaactgaaa ttttatggta atatgtatct actttgtaga tacaataaag
     2041 gtgaagatta tgttgcgtgt ccaaaaatgg gggaactcgg cggccgtccg actgcctgcc
     2101 gacatgctga aacaattgga ttttaaaatc ggcgacgctt tggtagcgga agtacataac
     2161 ggcgaactcc gtgtgcgtgc tgcccgacgt ttccgcttgg cagacttgct tgccgaaatg
     2221 gaagaaaccc cgccgcgcgt agaaggctgg gaaatcttgg atgatgtcgg caacgaggtc
     2281 gtctgaaatg tatattcccg acaaaggcga tattttccat ttgaatttcg acccttccag
     2341 cggcaaggaa atcaagggcg ggcggtttgc gctggctctg tctccaaaag cattcaaccg
     2401 cgcaacggga ttggtttttg cctgccccat ttcacagggg aatgcagcgg ctgcacgaag
     2461 cagcggcatg atttcaacct tactcggtgc aggaacggaa acgcagggca atgtccactg
     2521 ccaccagctc aaatctctgg actggcaaat ccgcaaggct tcttttaaag aaactgtacc
     2581 cgattatgta ttggacgatg tgctggcgcg catcggcgcc gtcttattcg attaaatgct
     2641 gaaaccgccc gaacctgtaa tcttttctta caggttcggg cggttgctta ttcggcacgc
     2701 tgactgctta ctgcatgacc atatgcctgc cattccctta aatcggctgc atgtccgtcg
     2761 gctgtttctg ccagtcctgc atatttttca gcgcactgtc cgaataatag ccagccttgg
     2821 gaatctgacg cgccatcaga tgcggtggcg gcggtagtgg ttgcgggcag gtttctgttg
     2881 cgattttggg cggcggcgta gtggcgcagg cggttaagct caagacgcat agcggcaaca
     2941 gttttttcag cattttgttt ttcctcttct aatttggttt gtcgttcggc aaacgcggca
     3001 gcggccttct gctcggcaga acgcgcctgc tttgcctgct cgatatagcc gtctttcaga
     3061 cgattcgaaa tttcggcagc agcagcctcc cgtcccatgc ggtatttttc ggcacggtcg
     3121 aaatgccatg cggtaaaaat caggacgatt agcagcaata cgcctaccgg cttccagtat
     3181 ttcaataaaa tatccatttc agacgacctc aaggatgcag cccgggcaga tacacggttt
     3241 tgccgttttt cttggttgcg gtcagtatct ggttgcgttg cgggctgttg cgtcggaaac
     3301 cgatgtgtac ccatgcgccg tccccgcgct cgggaaattc gagtatcaac tggtcgaatt
     3361 tcagcgcgcc ttcatcacgc attttgatta acagtttggc aaatgccggc gaggtcatac
     3421 ccgatgcgtc acaatcggcg gcaagtccgt gccggtgcgc cgatgtcggg ctgccaccga
     3481 ccaatttgtt tacccgctcg ctgcggaagc agcttgttac gataatcggg cgaccgacgt
     3541 attcgcggat tttttcaagc tgctgtgcgg tgtaataaat gttgtccatg tcggcgggcg
     3601 acggttcgtt cggtacacct gcgcgacgcg cggtttcact gcgtgtcaac tcgcgcagac
     3661 tgaaattttt ggtaacttgc atttcggttc tccatgttct tttcaaataa aaaaccgcct
     3721 aaacgacagg cggctatctc aataattctg cgtataaagt tttgatacga aaacgccgcg
     3781 aagctgcata ctttgcggcg ttttgctttt ttcaggcaaa ctatttcaaa ccatgccgat
     3841 gccgccattt gacaacccgt accgaacggc tgccgaaata tacacaggcg gcaatatcca
     3901 tcataaattt gcctaagctc ggcgtcagtc cgtaagcaaa gactatgtaa aaggtataga
     3961 tcgctccacc taaaaaggcg agatacgccc acgcctccgg cgacaatgca ctccatttgc
     4021 gcccgttcag acgacaaatc atcaagtacg ccgaaatcag tgatggggcg gcagaaagaa
     4081 tcaaaagtaa tttcattttt tcggtctcca cggcagaaga ttcagcagcc actccacaat
     4141 atcgtctgca tgcttttcga acgatggcca gacagcgcgg gcaaatctca acaatacctg
     4201 ccacaacaag ccgacaacga cgggggcaaa ggcatgtgca aactgtatgc gctgctcacc
     4261 cagcgacgga tggctgccaa ctacttcgcc gattaagaaa tgcgtcagcg gtggggcaaa
     4321 agcgccaccc aaaagcccgc cgataacgat ataggccact accatccagc ggcttttcgg
     4381 ctcgcttatc atcgttaccg ccgccgaagc cactgcgccc agcacgactg catcgacagg
     4441 catccccaac agataacctg cgccgaccac gccgccaaaa atataaacgg cggcaggggt
     4501 aataatcggt tcagacattt tcttttccct tatgcgaagg tcgtctgaaa ctgtttttca
     4561 gccgaccttc cgtgttatga atcagatggc tgcttcaggc aaatcggcat agaccaactc
     4621 cgcgccggtc aggctgttgg cggaaatagg ctgaccgtag gcatcgaccg cgcccccttc
     4681 aaccgctgct acaacagcct ggtatgccca gtccaataca tccgtaccgc gaggcggcac
     4741 gcccggaata ttcaactgca tcgaaccgac cgaacgtccg cgacgttcaa atgtcgattt
     4801 gcgcacatag ctgtctaaca acaccacatt aaagccggtt gcataatcca gcgacacatg
     4861 tcggatgacg tgaaactcgg cagaactgtc ggtttcggta tcgatgattt cacggttgat
     4921 tccgacggtg atttgatttt tgtcttttga catgatggtt tcctttggat aaaaaaagac
     4981 cgtctgaacc attcagacgg tttcggtttt gcagccgtat ctatttccgt ttccgaaaat
     5041 gacggtagaa aaggatacag gctaaaaata aaggcagcag aaagcgcgca tagggatacc
     5101 acggatggtc tgcatgccag tatccgtgcc gtccctgtgg aacggtatca tagcggtaac
     5161 tgtcggggaa aaagttgatc caaaccgtta ctgccagcca taaggctata tccctgactg
     5221 ctttcattta cttctgctcc tgtttaaatt cccagcaatt ccatttcaaa gcgcgaacgc
     5281 caacgggatt gcgcggttac gatgcagact ttcagacggc ggtcttttgc agtgtacttt
     5341 aaccagcttt cgtaaaatgc ctcaaggact ttaccggcat tattaacctt gctttgcttc
     5401 aacactttaa acacttcatc acgggtttta cttttcagat agcttccaaa cgacgaattc
     5461 ccaaaaataa gcggaatttc gtttggcgca agtttgacaa tacttcctgc aataccgtct
     5521 gccaacaccg ccatcggcct gatgcgctca tggcaggtcg caatttcgtc aaacatcttg
     5581 tccaccatat caacgacggt ttcggtaatt tgactgggct gcaccttgac agctccgtcg
     5641 aataaagcgt taataatttt aacataggct gtacgttttg cctgatccat aaataaacct
     5701 ccataaaaaa gcccaccctc aggcaggcag aaaaaagccg tcctttcgga cggctaaaat
     5761 ttaaacaata agacagacaa tacccgataa atcgcccaag ggtgaataat caaaattgcc
     5821 gctaatgcgg cagaggatat gcaacgaatg tgctgcacca tcgataccct tctgaaaaga
     5881 tatactgcct gtctttggta gatggaatgg gacggaaaaa ctaagaggca cctcctgcgg
     5941 agtccttata tacagcggcg gagggccagg aacccatacg gaaaactttt cgttacgcgc
     6001 tatcctcttt tcaggtgact gaatcgtaac ctcccgctga atcacaccat ccatgtgcag
     6061 ttgtagactg acaactgcac cattttctgc aacagcaaaa accggcggca cgataaccgt
     6121 ccggcgtgtt tttcggctat cagggatttg gcatatcaat tcctgataac ctaatggcga
     6181 ctgcttcagc tcaaacgtcc tgaccgccac gacatctccg atgatattag cggcctccaa
     6241 atccacggct tcaattcgcg cgccacgtat cgtaccaccc ttaattagac ctgcattgac
     6301 ggttgcacca ttcagcgttg gggcttcgat agtctggttg gcagcgatgt gctttgccag
     6361 tatcgaacca gtcgcgaaca ggtcgccgtt caaagcctgc ttcgccttgc cgttttcgat
     6421 aacggtaacg aaagcgggcg taaccgtctt atctttcgga tcgacataag caactttatc
     6481 tgccatcagg aggatttcgc cacttcccgt ctttccatcg gctcccactg caacccctgc
     6541 aactgcccga cgaccgcctg ctattgcctc agtcttcagc gtgtacaaag actgtatttt
     6601 ccctcctatc tctgcaacag cagaactggc ctgctgaact ttagccgaca aggtagtcaa
     6661 agcagacgta tcggcgttac tgtcctccgg tgcaggactc cagtcagttg ctaccgtgcc
     6721 gcgctccagt tttacatttg aaaccttgat ggattctgat gtctgatacc gcgcctgaac
     6781 gatgaagctt cgaagtgctt taacctcttt ggcaaccgtg tgtttggcga caatacgctg
     6841 tttcagcgtt ttggtcgtac cgctgacggc ttcgccgtac cacgcagcaa aataacctac
     6901 cgagttgtcc gcatagatta cggaaaattc cgcaccgatt cgcgggtatg gtttgccatg
     6961 aggcgatgtg gcgtttacca gttcgatatc gcacgagata atcaaactat cgccttgctt
     7021 cagatccaaa gcagacgaaa cgtcgatagt gacggttttg gtctgattat tctcgctagc
     7081 ggtcaacact ttgccggctg ttcctgttga taaggcataa ttccgaccgc cgacttcaac
     7141 attctccagc ttcgccgtca acgtgttgat ctcagacgac ctggcagcat cctgacgtgt
     7201 tacggtttcc cgcaatgccg aaataccgct ttctgcatta ccaagtctga cagccagtgt
     7261 ttcacgcgcc tgcgcctcgg ctctgtcgcc atcggtacgg gctttttttt cggcttccag
     7321 cccggcggcg gtattgcctt gcgcagacgt aacagtttgg atttgctgcg cctgctgctc
     7381 attgacagct tctgttgcgg caatacgcgt accgatttcg gatgactttc tggcaagctc
     7441 ggcagttcgg gcagatgatt ccgcctgtat tgccgccgtt cgcgcccgtg cttcctcctg
     7501 taaggcttta gcacgttccg ctgcctctgc agacactttc aaccccgcag ccgcagccat
     7561 atcacgattc agcgtgtcta tcagctccct gcttaatgca gacttcccga ttgcaccctg
     7621 aatctgctgc actatcggcg caggattgtt atctgcccta ccctgtacgg cagcggtaaa
     7681 ttcccccgta tttcctgcaa tatcacgtat gcgcacccag aaataataaa cgtcggcaac
     7741 gccgacgccg gttaaggtat aactgttttg cggatacgcc agcgacgcga gtttcgttgc
     7801 cgtctgaaga ttgttggtct tgctatacca cagctcgaaa accaaatcgg aaacaacggt
     7861 ttgcggcaat acccaatcca cggtcacaga cagtgttttc ggcgtcgtcc tcaatccggt
     7921 aacggtatag tcgatactcc aagccttaac caacggtgcg gacagtacac cccgtgcatt
     7981 acggccgcgt atttccgccc gataattgcc gttcggcaga ttttccaaac gaatttccgc
     8041 tgtctgtgca tcagggatat ggcggtatag gctgttgtta cggtaaatct taatatcgta
     8101 agttaaaacc tgaccgtttg cggccaggtt gtcccatgtc accacaactg tcccaccgtc
     8161 ggtattgaca gccgcatcgg tcaacacagg ggcagtgttg tgcagcgtgg taatttcatg
     8221 gtcaaaatgc gcaaaactat ccacggcagc atattttttc gggtcatgca gcaacgcggt
     8281 aacggtataa gtacccgcat ccgtattctc tttgatgccg atggcacggt agaggcgcgg
     8341 cttgactttg ccggataaaa cccacgtatc gccagcctgc aacggcacct cacgctccaa
     8401 agtaacctta ttgcctgctg ccgcagttat cttcgctgat ttcagactac cgccttcaga
     8461 ataaaacacc aaggctccga ccgcatcgga tacaggtcga tccagcgtca gcacattgcc
     8521 cgaaatggcg gcaacacgtc cagacaactc tgcacctgcg tattgattgt ccataatctg
     8581 cacgatgtcg taaggcagat gcttcaaccc ctcacgcccg atttcaaacg ttacggcgtt
     8641 ctgctgccgc aactcagttt gcagcgtcca tgcgccgaaa cgtgccgcct gcccgcgcga
     8701 atcgcagccg aacgcagtaa tctgcttgat attcaaacca tagcgggcaa tggcttcgtt
     8761 gtcggctaca tattctgttt tagcgcgata gccatcgtat ttgtctatat actgcacatg
     8821 aacagcagta tgaatggact tcaacgctgc acccgcataa ttaaacaggc cgtctttaac
     8881 attggcattg gtatattgcg ccaccggatc ggcgtcggca tccatgacga cggatacttg
     8941 ctgtccgttc caaaccggta aaccggtaaa gacgctggca agattgttca aaaattcacc
     9001 tgcctgcatc aggtcggtaa tgtaggcgtt gcagacgaaa cgcggctctt tgccgccgaa
     9061 gccgtcatcg accggctcgt cgcaatattt cccgatttgg tacaggctcc atttgtctat
     9121 gtctgccaca ttcagacgac gtgccagcgt ggaaaatctc ggctgggtca gcacatcgta
     9181 aaaaacccat gccgggttgt ttgtccatgc ggttttgaaa ctgccatccc atgttccacc
     9241 cgtatattgg cgggtttcag gattgtaatt ggacggcact ttgaccaagc ggcctttcat
     9301 caaataattg cgacgcggaa tctgattccc gaactgcgcc gaatcaatcg acaatgccgc
     9361 aaacgcggta tgcggatagc tcaatttcgc atcaacgatt tcaacgtagg acgaaaaata
     9421 ggtattgttg ctgaccttgt cggtcttgga atcaggcgaa attcggaaaa cgcggatatt
     9481 gaacggcact tgcggcacca catcaaattc gacatcctga taatatgtcc cgctggattt
     9541 ttcattgaaa cgcacctgat ttgatgcctg cacaccattg ctgtttatca actcaacgcg
     9601 cattaaggta tcagcaggca cggtgtcgcc gttgtcttca acctgtgcat tccgctcgac
     9661 agcgaccgta atccgcaaac ggctgaccaa ttcgtcggta acggcgcgaa ccatcggctg
     9721 attctgcttc accgcagccg aaacggctac ggtgcgctcg gaagcatcga aacccggaac
     9781 ataggactgg tcttgctcgc cacgctggaa ataacccgta actccattaa aattgtagct
     9841 gccgtccgaa ttttggacag gagtgtcatc aaaatacacg cttttgaacg gcgcatcatc
     9901 gccgttggca aaccccgaaa ccacaccttc ggataccgca tcaataatcc gcagcgactg
     9961 ggcgctggat aaactgtttg gggcttcata aggtgtccgt tgtcctccgc ccgatttgcc
    10021 gcccatattg tttcctttcc tgattcaaaa ccttacttca cggtattcag aataccgatc
    10081 aaagcccaaa aatacacaaa caaaaacaga cacgccgcga agtttgctcc ttcgcggcgt
    10141 ttcgattttt cagacgacat ttcagcccga aaacgccgcc ttataattgc gcgcccgcac
    10201 gctgtcgtct gaaaagtcgg tacggtattt ctgcccgttc ggcgcggttg ctgctacgcc
    10261 ttgaacgaat gtcttggaca aacccaaatt caacaccgca cctgacgaag ccgccgtcga
    10321 tgacggttcg atacggcggg actgcacacc ctgcgataca acacggctgc cgcagtagca
    10381 aagcccgtaa gccaacggca cagggcgacc ctgtgccgtt gtattggcaa ggttggaaaa
    10441 agcagaattc ttactctcct ccaccccctt gccgtcggca tccaatttgg gctgtttggt
    10501 caacatttgg gcgacaccgc cagccaccat accgataccg acggcgataa gctgcgcacc
    10561 actggcccaa ctcgtatacg caccgactac aatcaaaacc actccgacaa tggtttggat
    10621 caacccgcca tttttacctg caccctgtac gcgcggaaca atgtgcaata caccgtcagc
    10681 aggtcgtctg aaaacgctac ctatcgtttc ttccgactgg tctttaccgt caaaccgaac
    10741 ctgatacacc ccgtcccgaa tccgctgacg caagcctttg atttgggtaa acagagcgtg
    10801 cagggcttcg gctggcgtct cgacgtgcaa aacaaaacgg cggccgtatt cgcgaaggcc
    10861 gccgtacaga caaacagtaa tcatgcttgc tccatatggg taaaatcgtt ctcaagtgcc
    10921 tgcatcatgg ccggctcgaa atcgggatgc cgccaaacgc tgtgcgtaac atccgcccaa
    10981 tagcgggtat aaggtacacg gcagctcaat tgattgtagg catggtgcag catccagtcg
    11041 ttgcccaaat acaggacggc atgggacgca tgcccgcccg ttgccgtcaa gaccacatcg
    11101 ccggcgcaaa ggccgtctga aacacgggaa aacccgcagt tttccaaatg cttttcccaa
    11161 aagcccgccg ctgcgtcctc atccatatca ccgcgtggat ggtcgggaaa aaccagcccc
    11221 atcagcatga aggcatcgcg caccagcgcg ccgcaatccg tcttgccgta ttcgaataca
    11281 cgcccgcgca aatgcggaac ggggcggaac agtttcagac ggccttgtgt aaccaaaatc
    11341 caaggcaagc ccgtttcgac ctgcatccat ctgtctgcac ccgataaaaa cggctcgccg
    11401 cgcggatggg aatgcacgac tgccacaatc tcgccgacgc gctccgccgc catccagtcg
    11461 tcagcggaaa tctcaaaggt ttcatgcgga ttttcggcgc aattggacaa aggcagaaac
    11521 tcatagcctt cataactgaa aaccaaaacc ccgcacattt cagacggtac ggcttcttca
    11581 gcacacgcca gcatttcgcg gcgggcttct tcacttaaca aatccaaatc catcatgtcg
    11641 ttaccttatc actagatggg aaaccgccga acggcaaaac tgccgtcgcg ccaaaccgcg
    11701 ccctacatcc tgtcagtgtt ttgctgcata cgtctttgga cgcatcgtcc gtgggcatat
    11761 cgaaacggtc ggcaaccgca cgccccgtat aaccgcaccc ttcgccgcga tactgccagc
    11821 agcaggtatt tgccagcata atacgggcgg gaatgaccga accatccgat tcggacggcg
    11881 cggcaagttc gaaggttgcc gtttctgcat tcaatgccgt catccgttca accaaatatt
    11941 tgccgacgac ttcctgcatc gggtctgcgg tcggattgcg cccggactgg aaattgaccg
    12001 catctaaaaa cttggcatag gtttgacggc gcacaaccag cacgccgacg agctgaccga
    12061 actgatccgc cgcgcccgta atcaaaccca agagattcga taccgtcagc gtcggacggt
    12121 tacccgcgcc ttgcgaagtt gattcaaagc cgtcagcctt aatcggataa ggctcatatg
    12181 cctgtccctg ccagacaacc gccgtacccc gctcgttgac ctgattgcag aaatagaaaa
    12241 cccgaccgcc cagcggccgc aagtccactt gccacaaatc gaccaaaaca tcctgctgcg
    12301 cggcagacaa ggcttgcagc atcacacccg acatggcctt tatacgcgga ttcatgaaag
    12361 cacctcctca aacgtacagc tcaattcgta ggctttgcca cccttcgccg tttcctaata
    12421 ttccgatacc ttgaccaata caggcacgcc gtcgggcggt ctccaattaa acggctcaac
    12481 accgcgccgg gcatcaaaaa aggctttgat ttctcccatc aaagcctttt gtccgactat
    12541 cttaatctcc cagcttcgca gcttcggttt caaagattta ggctgccgtt gctcgtagcc
    12601 gtcgccaaag cggacggaac ggacatcgaa tttatgtaca gccttattgt ccgaagcaac
    12661 acgccatcgg aatgtttcag tcatgatcgg ttcctttcag acgacctatt tatggtaagt
    12721 accgttttca cggtacacat tcttgacata ccactgttcc accatgcccg gtatggcagc
    12781 ggcaagatgc ttcgccatct ccgtatcggc actgctgtcc gattcggtgc taccgtcccg
    12841 atttatagtg atgttgacct gcatgcttcc agccccggcc gaacggactc cggtcaaaac
    12901 ggacggcagt cctactgcgc cgccaccggc ataaccattc aaccgcagcc gctcgacagc
    12961 cgcaacgccg ccgtgattac gtacgtcccg ctgggaaaat acgacttcgc ccttgtgaac
    13021 aatgccggca ggctcatact tcccgccgta gccggtatag ccgccgccgg aaaacaacgc
    13081 gtcgaactgc gtacttcctc caccgacaat accgccgtcg gcataaccca acgccgactt
    13141 cattgcattg acaatcgcca ttttaatcag catttttgac aaatcctgca aaatggaaac
    13201 agtcaggctt cgaaaatcaa gtttgcctgt ggcaacaaag tctgccagcg catcccccat
    13261 tttgtcgaag gtttgtacgg tggcattttc catcgcctgc ctcatcgttc cgaatgaatc
    13321 gatgtagctt ttcaagccgg actcgatacc gccgcgccaa tcattgtcgc tgtctgcacg
    13381 cgccttctgc atttgagaaa gattgctcat cccttccgcc ttgccgcgct ccaataaatc
    13441 gatactttcc aacggcgcac cttcttcacg ggctttcgct atctgtctgt cccacagtct
    13501 cgccagcgtc agtttctcga tttcttcacg ggttttgccg ataagcgaaa tttcaaacag
    13561 cctgtcatcc aacttttctt tcgaatcgtc ggtcatttgc ttcactatgt cggaatattt
    13621 tttggaggcg gccgtcaaac tatcctgcgc atcggccttc tccgccagct cgcgggcatc
    13681 ggcctgctgc ttcagcgtcc aatcgccgaa agtcgggtcg gacaacaact tcaactgttc
    13741 gccgatggcg cggttgccgt ttaaaatttc cagcacccgc ttcgctcccg cctccgccgc
    13801 ccgacggtta aaatcctcgt gccatttttc gtagccggaa agaggttctt tctccactcc
    13861 cttaaacaac ccgaggtgcg ccatattttt cacctggccc tcaacaccgc cggcaaatcg
    13921 cgcagccgcc tctcgagaac gccagttgaa atgccagtgg tcgccggttg ctaccgtacc
    13981 gtttttattg cgctgtccgg caagttccag tttaaggtta aaatcctgcc cgtttttaaa
    14041 ccccaacgac tcaagataac gggtcatttg ggcgacaact tcctgtttct gcttcatccc
    14101 cataccggga gaaggagtgg catcaaatgc caatccactg ttatgcaggc tgtttttccc
    14161 aatgtggtat cgatctcgga aggcgccgaa acggaacaga cggtctccca gcatctgctg
    14221 catggcatgc gcgaaggcat atgttccgcc tagcgctttg ccgcccgctt cggctcccgg
    14281 tttaatcctc aagccgttcg aaacagtggg gtagcttgtt ttatccgttt tttctttctg
    14341 tcgttcgtgt tttttctcgg caaaactttc attaatcagc ttggcatttg ccgcgtgctt
    14401 attaatgatt tcttgccgct ttttcgcgtc agtgatgccg tccaacgcct ttttccgtgc
    14461 tttgtcgttt ttaagcagtt cgcgctgccg ttgctgctct cgagtggcat aacgttccga
    14521 aacagcctcc aattcggcta taccttcagt tcgattttgg ttctgcttct gtttctgccg
    14581 caaagtttca gcagcggctg cctccttgtc gatttcggca cgcaaccggg cacgccgcgc
    14641 ataggcttcc tgcagcttac gctcaccctc ttcaccccaa aacaattgtg taaccggatg
    14701 tttcttgctg gtttcgattt gggaaataaa cgaatctagc gcggcaattt catccagctt
    14761 ggtcttgtcc ctacctatgg atttaacagc atcccatgcc tccgacgcac tttctttaat
    14821 atccttccac gcccgctcaa tcaacccaag attacccagt acgcgttttg ccatatcctc
    14881 cgactcttcg gagaatttcc gctgcaccaa tgcaaccgcg tcctgttccc gaccttgtgc
    14941 ctgcaaagcc ttgacctgct ggtaaacatc ggcagtcatt gtccggtagg tggctgatag
    15001 ggataccaca gctttcagcg ggtctttggc gatttcagta tatttctcaa ccaaatcgtc
    15061 aatactttgc cccgttgcct gcgactggag ggtaatactc cgggcgaact gttcgtaatt
    15121 gtccgttgca accttgccgc ttgagaccaa ggccgtaatt gcagcacgcg catcagcata
    15181 gccgcccgtc gctgccccga ccgaaacagc gatttcctgc atcctgtctg cagtaatccc
    15241 tgctgcatct ccggcaagta tcaaggcttt acggtattcg cacgattcct ctgccccctg
    15301 atacatcgca taacccaatg ccgcaatgcc gccgcccaac cccgcgacag caaggcgcat
    15361 aggggaaatg accgtggcca gtcccttaag cataccaccg aagccgccat acatatcacg
    15421 caactgccca ccctgttgaa tcatgatcag aaacgggctt tgcccgcctg caagctgggt
    15481 aacgatgtcg gtaatttgtg ccggggtttg ccgcaatgcg ttattgaact gcttgacaga
    15541 ctgcgtagcg cgattggtct gcgtattatg cctgtccaat tgggacagta gcggattaag
    15601 ccgtgcaata tcgataccgc gctggcgcgc aagctcttcg taatactctc ggtttgcctt
    15661 accgcctgca atcttaacgg ctatatcgcg gcggatggca ttctccagag aagccaaaga
    15721 ccgttccgtc cgcttcgatg ccgccgacac taccgtcgat gatttctctg cgccgtcgcc
    15781 actatgtacc aatccgtcag aaatacgccg cccctgggaa gatgccacat cccccaaaga
    15841 cttgatggat tgttttgcct tttctacgcc gctgacgaca ccgccagttt cggcggtaat
    15901 ataaatcttg gtttcgttat tcatgttcgc ctgcccacat tgacaacact tcaagctcca
    15961 tcaggcggac tttctccaac agtgctttcc gtttcttcga cttgatattg ccgcattcca
    16021 taactgctgc gactgcggaa taatccaacc ccgtcgcacc cgacattccg atacgccact
    16081 gcgtcgatac tccaataaac agttgcaccg cctgccagtt gcacggccat acgccaaaag
    16141 tggtctcctt ttctgaaaaa tcgtccgccg aaaatccgaa tacattcaat tccgccgcgt
    16201 caggctgctt ctcataaagc gcacgcgcgg cggcaatcag tttccctcgc gggcattgaa
    16261 gacttcctca acatagccgt tgacgatggc aaacaccgcc atcggatagc tatccagcag
    16321 gatttcgaca ttctgccggt cgaatgcttc ttccaaatcc cagccttgaa cacaatctaa
    16381 gacggtatct gccgtccagc cgtctttatg cttttcggta aattctttca ttgccttgcg
    16441 gccgcgcgcc ttaaattcaa attcgacgtc cgcaggttct gcaccgggaa cagggatttt
    16501 tacggtatgt cggaaagttg catcaggctt caaagtgagt tttgccattt caatactcca
    16561 aataaataag gttgcccgag taactcggac aaccttgata tgccgataaa atcaataacg
    16621 gtttacttcg ccggaaatgg cgtaggacaa cgttaccgcc attacttggt tacgaaccaa
    16681 ttcgggggtt ttattcatgc tgggataacc gttatagcaa atcagcccac cacctttcaa
    16741 aaccactttc aaaggccact tgccgccttt atcgctgcat tttgcagccg ccttgtagcc
    16801 ggacaacgaa gtatcgtcag cgatcttaat cgacattgac atagctgatt tcgtggatgg
    16861 gatttgctgg tcaaaatcgt cctccaggaa accaaaatcc acatattgct gctcgccgcc
    16921 actggtcgaa aattctacaa tttgcgaaac ttgcacccaa tcggtaattt tctgaacagc
    16981 accaataccg ctgcctgccg gaaactcatc tgcattggaa gtatcaatgc cggtcagctt
    17041 gaatgtatcg gctttgacat cgccaatctg gaaaacgcgt tcattcaact ttccccagcc
    17101 gcttttaaac aaaaccaaat cgccgttggc aaacccgtgt cctgctaccg tcaggacgca
    17161 ttcggcagca ttagttgcca ccgtagcttt tttctccgcc gccaaagcgg tcgcaatgtg
    17221 aacggtcgca ccgttcggta atttcactgc catactttaa ctccaaatta aaggcaatct
    17281 gaaatcagac tgccgtatca aaataaattg cctgccatcc ttgctgataa tagacggtaa
    17341 cggcctcgcc gctttcgtcg gaatcgatat tcagcaaatc aggcaccaga ttttccaaat
    17401 caccaacacc caaatcggaa tgttcggcaa acaactgccc aatcaaagac agcatctctt
    17461 ccgccagttc gtccgcaccg gaagcagcct gcacgcaaac caacgtaacc agccgcaccg
    17521 tatgccggta ggtaggcgga aaatcaaacg tttcctgttc tgttcggcga cggtcaacgt
    17581 acaccacaac acacggcaac tgcgattgcg caggcgcgaa accacgcccg gaatacacgc
    17641 gctggaactt cgttttcagc acatctgtcg ccgcattgcg gatttcagta agtcggcttg
    17701 tcatgtatcg ccctcaattg cacaacaacc attccgcagc cgtcaaaatc ggtttccgcc
    17761 accgcataac gtttgccacg cacggtaaca accaccgact tcacgtcttc cggcaggtcg
    17821 tcttcagtaa cgatgatttg cgggtcggca ttggcaacgg caacgccaaa cccgctatcc
    17881 gttataaatt cacggtcaaa tatcgcgttt acctctttac cgccaatcat cacggtttca
    17941 ccgaaatcgg caggattggt aaacacgttc agcggctcgt taaacactgc cgtcctcgcc
    18001 gccctcaccg gatgcgttac cgctatcttc agcttcgccg ccatcggcaa caggggattc
    18061 ggcctctttg gcaggcgctt ctgccgccca accttcgcgg atatagacag ccgccgcaga
    18121 ttcgtccacc gaatattttt tccctgtggc aaacgtctgt tcaccatcga aaaaactacg
    18181 ggtcgggata attttgattt ttgccatttt taatacctca attaataagg tcgtctgaaa
    18241 ttcagacgac cttgggtttc acaatcaagc agccgcgatg tctttaatgg cggcaaagga
    18301 ttcgacatga cggacggcaa tatccacatc ttgcaacgtg gtgatgcgta ccgcgcccgt
    18361 agtagacttg gtgtacggat caacaatcac atccaaaacg ccccagtgcg caatcatcaa
    18421 atcagaccag ttaccaaaaa tcagcgggct gcatttgttg gccgccgtgc ctttggtcag
    18481 gttggacgga atttggtttg ataccgcgca acggtagccg ttcaacggcg ttgcgccgtc
    18541 ctgctagatg tagccggaca cgccgtcggc cttcagcttg gttttcagca gaccgcggac
    18601 gcgggcattg gtgatgtatg ccaaatcgcc gatgtcggca ttggcggcgg caatggcact
    18661 ttccaaagcg acgatatgct tccattcggg cgcaccgccg ttcgcaccga tttccaccgc
    18721 gccgatgccg gcggtattca ggatgccggt cggttcgttg ccggtacctt tgccgttgat
    18781 ggccgccaaa tcgataccca gcatcatcgc tttcaataat tcgctgcggg cgaactgttc
    18841 ggcagacagc gaggattgca aaatgaattt gcggctcaat tcagtattgg cggtaacggt
    18901 tttcggtttc aggctcattt gtccgaaagt ggcattcgat tcggtcgcgc tgccgttttc
    18961 atccacccat tgaacggtgt ttccggtcag gtgtttcgga atagtgatgt cgccgaccaa
    19021 gccgtccagt acagtggcgc ccaactgggc aacggcaagt cggttgcgca gcagttcgat
    19081 gaacaagtct tcgcggaagt cgttttcgat gacgttgccg ccgtttgccg cattgccttt
    19141 gctgtaagcg cgggcaatca aatcagtcgg cacaaagaag cctgccgctg cgcgaccatg
    19201 tcgtttttcc aactcttccg acacttcgcg ttccaagccc gctttgtccc atttgccggt
    19261 tgcggcggca gacatggcgc ggagaaggga aaattcacgc tgttctttat cagtcatgcc
    19321 gatttcaccg gcggtaacgg tcggcttcgt ctgcatgttt gccatgatgg cggcgcgtaa
    19381 ttgtgcttca ctgccgccct ctttaataac cttttcggct gcttcgatac cgccgtgggc
    19441 ggcgtaactg cgaccaatgg ccagcagttc ggaaacgcgc gcgcgttcgt tctgcatacc
    19501 gcgttcggcg gtgttgttgg tatcggttgc tgcggcggca gggattgcag cggcggaagt
    19561 ttccaccgta gtgggcgttt gatttttatc catgtttcga tttccttttt caggggttgg
    19621 gtttacaggg ttttcaataa atggttccac cgacctgcct acacctactg tcgggtctgc
    19681 aggaacggtt acaaaactga tttcatacgg catccagcgg gtaacgatgt aacggtagcc
    19741 ctcatcgtca gtatcgggat tgtccaatac catatcctcc actcggtagc cgacgctgat
    19801 atggcgtagg atgccgtctt gcacgtcttg gaatttttcc gttgccttcg taccgttgcc
    19861 aaaacgtacc aaggcacggc cgcgcttgtc ggcatcaatc caagcacgtt cgatgatgcc
    19921 gatttggtcg tcccagtcat gattgaacaa caccgcgccg ccgtcgttca ggcggcttaa
    19981 gtcaacagca ccctgcgcat gacttaatac ttcatcaccg aaccaacggc gtaccgattc
    20041 ttcgctggaa aacgccactt cgaccgtccg tttttcaaca tcaacacttt cgcgctgaaa
    20101 tacggcaaag cggctcattt gctgcatttg cgccttatca ggcttcattt tcttcattcg
    20161 ggttatcctc cgattccggt tctgccgccg atgcggccgg ttttacgtcg gcaatgattc
    20221 cttttcctgc caacatctgg ttttcctgtt cgatttgggt aataacatct tcaaaatcca
    20281 aacccatttc cgcgcaaata tcgcggcggg atttgactgc cagcgccacc gcctctttat
    20341 gcgcattaat atctttcagc gggtcaaccc acgaccagcg gcgcccctgc cagttgcagg
    20401 ccttgaactt gtccagcttg ccggcaggca gcgatttgcc ggacggcatc ttgattgcgc
    20461 ccattagcaa cgccgcctca atccagcgat cgaatacgtc atacaagaac gcgtcggcaa
    20521 accagttttg caacgtcatc catgtgtcgc gttcctccag cgtcccgctg cggatactgg
    20581 aaaagttcac gccctcaagg tcgttcgcca agctgtgata agccacgttc aaaccgctgg
    20641 cgataccgcg caggctggct ttgacgaatg cgtcgtaatt ggcgtgcggg taatccggat
    20701 caaacggcgt aaagtcgtaa ccctgcggca gttcgtgaaa cgtacccggc tcgaccgaat
    20761 cgattaaatc gatgctgccg cgcccgttat cgacctcttg cccgtcaatc ggcggcatga
    20821 agttgtcggc gtcttccgtc tgtttgaaaa agcccatttt cgatgcaccg acacgggcag
    20881 cgataatggc cgcttcctga tagcccgaca ggttttgcag gccgatgatg gccgaagcca
    20941 cccacggaaa gccgcgccgc tgctctgggc ggtcatgcag gaaaatatgg ctgatttgct
    21001 ctgccggcac ccgttcgcgt aaattgcccg tattcgtctg tccgtatgat tcgcccggat
    21061 gtgccgtccg caaccagtac gctacaggac gggaatagct gtttaactca acacccatgc
    21121 gcacggcgtt acgcccgttt tgctgcggaa cgttgtatcc cgtatccaaa cggtcaatat
    21181 ccagcacctg caacgcatag ccgtaatcat tgtcaaaccc tgaaatatga cgaatcagca
    21241 cttcgccgtc ccgcgccacg ctgcgaatca gcagccgttg caggtcggta aaagacatct
    21301 ggccggtaac gtcgcacacg ccgcgccgcg cccagcggga aaacgctgct tcaatggcct
    21361 tgttcgccaa ggcatcgggc ttgtcggcgt tatccagcaa aacacgcatt tgcagggcaa
    21421 aaccgtcgcg cccgataacg ttgctttcga ccatattcaa aaacttgcgc atgtagtcgt
    21481 tgtcgcgtgc aaggctgcgg gcgcgagtgc gcaggcggtc aaggtctgac cgcgccaaag
    21541 cgtccgccga ccagttttgc ggctgccacg aagccagcga cccgaccgga cgcgcccctg
    21601 caaagttgcg gcgggctgtt ttcgggacgg cttcccgcct gccgaacaaa cgcgcaaaaa
    21661 aaccgcgctt tttcggcgcg gcatttgatt gttttgccat agctcatcct aaaatcgcgt
    21721 gatgatacgg cctgaacggc gcggggaaac acccgccgcc gcttccagcc gcttgatttc
    21781 ctgctgccag aaccgtatct gcttcaacaa atcggcaagg ctggaaaact ccatttcgcg
    21841 gtctttgatt ttgtaccgct tggtcatgcc cctgcctgcc gcatgttcct tgtaggcttt
    21901 tcgaaggctg ttcagaatct ctcgcgcttc ttcaagttct accgcatagt catgtccgct
    21961 catcgccgta tcccttcaac agttcggaaa caccgcacat tgccgcaagc agactgtctt
    22021 cagattcaaa aaatgcatga tagagaattt cttccagtac atgctgcatc aggtcatcca
    22081 attcgcattt ttccagaccg tccattaact ccgcatattc ttcgggttcc aacagatgca
    22141 ttacggcaca agaatcaagc tgccgctgca aataccatcg cgcctttttc aaatcctccg
    22201 cgccgttctt ttcccgatga cgccagacat acttaaacgc attacccatg cagaaattca
    22261 gccgttcggt aaattcaatg cattccacgg cgcggcttcg atagtgcggc ggggtgatgt
    22321 tgtcttgctt ttccattttc agacggcctc ttttgcataa aatttactga cgccttgctc
    22381 aaaacgctct tccaccaagc cttcctcaat cagcgtatca atatcgcggc gggttaaaaa
    22441 atggcacaga gcatggcaca atggcacaaa tttatggcac aaccaaaaat ccaaactaca
    22501 aaacgcgccc gacaactctg ccgcacgcgt tttgaaaaca tcatacatat gtcagactca
    22561 atcgtcaaac ttcttcaccg ccgcgatacc tccaaccagc gctgcggaat cgtaaaacct
    22621 cattgcccag ggcatccatt tccggcaatc cgtccgccgc ttgccagcca gccggcttaa
    22681 aaatccagtt ttgacacgat acgtcgccat ctttattttt cgtccgccac cagcgccgcg
    22741 cccgcggcat cttctcagca atgtgttgga gaaactttgt tttaccagtt tcccgctcgc
    22801 cgttttgcct gcaccactct ttgtaaacca accaaaggtc gtctgtaatg caacagcaaa
    22861 acggcaggtc tttaatacca ccgccagccc actccgaata aaaggtttgc caagcatatc
    22921 ggccatagga aatgacgttt tgtttcgcgg cagtcatcgg cggcggcgtg tttggatcga
    22981 atcttacagg ctcttccagt ttgattacct cgtatccttt ttcgttttct gctccctgtt
    23041 gcccgtaagt cagataaaaa ttccaacaca gcaggaaact gtaaaacaaa cggacaccat
    23101 cgttgccgat acagtctaaa acttcatcgc gcaatttttt gtccaacttt ttctcaggcc
    23161 atacaacgaa ataacgccgg tcgttttcct caattttgaa aggatgagat tcattacgca
    23221 aaaacacaca attcatatgg tttgcttctt cgtaagcatc ctggaatttc cgctcgacgc
    23281 gcatcgtctt gccggtaatc atatgttttt ggctgcctgt tttattgtat ttttgctgat
    23341 ttgtgtaaac ctcttcaaaa ataccgaaca ttttgcctga tcggtttgcc gtatagttgc
    23401 tttccaagtc ctcttgacca tatgttgcgc cgtattcgcc gtacatcggc ttcacgattt
    23461 cctcgaaaaa gaaagattta cccgcaccgt gtatatgacc gtgcatgaca acggcggtcg
    23521 tcatcttcgc gcctacgttt tgtaacggat aagccagcca attcaaaatg tattcgacct
    23581 gttggtaatc cccattacat aagtgattaa tcaaattcag aatcggcttg atttcaggga
    23641 ataatctata caattcgtag tttgtttcgg gcatatcctc tttgggaatc gggaatttcg
    23701 gttcaatcgg catgcctcgg aagatgttga tatagtcgtc agacaacacc cgaccaggct
    23761 caaagaccaa tcggtcgaac cgttttacaa ttcggctcgg gctattgacc caaattttaa
    23821 aaccatcagg cgtcatcgac agacgagccg ccttttcagg gacaacgcgc catagtttgt
    23881 tgtcccaaat cgatgccgaa ccatcaagat aaatgaaacg ctccatcata tcttgcgtgt
    23941 catcatcttt taccgcctga atcaatgcgt agtctttttt cagacggttg atttcgtaca
    24001 tagtcagcac cggcgcacgg ccccattcat accaagcatc gacaacgtct ttgccgaaat
    24061 gaacagtcat tgcctttcgg gtatatgtaa cccctgtttt tctgttcacg ccgtggtctt
    24121 taccttcaac cagcccaaat tctgatttca gcttttgcaa tttggccaaa tattcgtcat
    24181 ccacatcccc cgcaccccct tgattgcctg ttgcttcgag agattcatgc aactgctcag
    24241 attccggctc catatcttga atgggtgcgg gagagttttc agacggcatt tccgcttccg
    24301 gcacatactc aaccaaccaa tccgccgcgc ccatccagct caacacttcg gaagggtcgc
    24361 agatgcgccc gccgtctgca atcgcatcgg caatatcgaa accatgaggc catatccctg
    24421 gagcaggaat attgaccaac caaacacggc aattctgctt tgtcagtacc tcagcaatac
    24481 caagcatcgc cttcattccg ccctgctcat tgcgcggcag aaacggtttg gattcagggt
    24541 caacaccatc atcgcgatct ttctttgtta gcttttggcg cagcgaatcg caatcaggcc
    24601 acaagacgac atcacgatca acgaccgccg accaatccga cttatcccag ttattacaac
    24661 cgccatgcca cgtcaggacg gcatagttat aaccctgagc atctgccgcg ttcttacatt
    24721 tctccccctc gacaaccaaa accggtaatg atgggtcagc aaccaaagaa tcaagaccgt
    24781 acaatgggcg cgggttatcc caacaacgcc aacgccacat cttttcgcct gttttcttat
    24841 gctcgcaaaa cgtataaggc agatcgattt ttccgccgtc tgattttcta aatcgggcaa
    24901 caccgcccaa aaccgcgctg gagctatcgc ggaaaacaga tttaaaaatc aggtcgtctg
    24961 attttctaaa tccattccca aagctcatag aattcagcgc atattcaggc acaggaacga
    25021 ttggcttcca caaatcacgc tcctcctcct ttactggagc aggaggaggt aacagcttcg
    25081 gagccttatc taccaaatcc ccatgcgcca acccaagcaa ggaggcaact ttgtctctag
    25141 cctcgttaaa actatacccg caaacatcca tcaacaaatc aaacggactg ccgccttccg
    25201 gcttgcattg attgcaaatc caaacaccac tcccgcgact tgaaccgcta ccgtccgtaa
    25261 acctgaatcg gtcggagccg ccgcatgacg gacaggggtg atgtttttta tctaaaattt
    25321 cggacggtat gccgcacgct tctaaaacct cacgccaccg gtcatgcgcg gcggcattaa
    25381 tttcggcttt tgttgcatat tttttattca ttttcagtca tcctttacgt tttttaggcg
    25441 taaaaaatac ccacccacgc acacaagaat cactctggag agggcgggct aaacactgat
    25501 tgcgcgatta atcagtacag ggtaattaaa tctgtaacat cccttgaggg ataaataacg
    25561 gctcagtcca caagccgatg tgcagtatcg gacaggctgc tttcgccaac acgaggcttt
    25621 gtgcgatgct tcgcgcctta gctgcctcct ctttttcgcg ctcggcgtcc atcaatgccg
    25681 ccatgactgc ctgcttttgc tcaaattctt tttcacggcg cttgtacagc aaatcttgct
    25741 gatagacgtt gtggcatcgg cggcatcggg gcgcgtattt ttgcagcccg gtttttctgt
    25801 caaagccgtt tttcggaaac gccgttatcg gcttaatctc tccgcactcc ttacacgttt
    25861 ttgttcgatt catcgagaac tccaatatta aaaattatcg tcatcaatgc ggcttcccca
    25921 gcccacagcg agttttccac gacaggcttt ttttatttgg gttggtcgtc tggtttcttt
    25981 gagttcaaaa acaggtcggg atacttaagt tttattcgtg caggtatccc gcgcttcgtc
    26041 caattgaaaa cgcattgagg gctattccct gttattcgac caacttccgc gtaactgccg
    26101 attgattgca acaggcgttt gtcttcattg actcttttat ccataaataa accaaatgtt
    26161 taaatctaat gctaatatta aacactatgt ttagataaaa atcaagtctt gtgtaacaac
    26221 attttgttta aatatgggag aataattaag ccaaccgcga ataggattaa aaatgacaat
    26281 gcacgagaca actgacagac tttttgagat agccaaagag cagggagttt taaagccggc
    26341 tgacatagca gagcgtctga atatcagcca acaggctttg aaaaactggg aaagtcgtgg
    26401 catagcggca aaggcgctgc ctgaagtagc aaaagcattc ggtgtatctg aaacatggct
    26461 gagaacaggt gaaggcagcc gaaccgcgcc cgtccttatt gaccccgacc taccccacga
    26521 agtcaaagac atccaccgcc cgatgacgtg gagcagcaac gacccgctgc ccgacgatga
    26581 ttatgttttc gtcccctacc tcaaagagag ctgcttcaaa ggcggagtag gcacgtatga
    26641 aatccccgat tacaacggct accgcctgcc gttcggcaaa tccacgctta aacgcaaagg
    26701 catcaatccc gacaacgtgt tttgctgcac cctgaccggc gacagtatgg aggaaaaaat
    26761 cgcagaagac gcggcaattg ccgtagatac gggcgaaacc gccatacgcg acggcaaaat
    26821 ctacgccttc gcccaggacg gtatgttccg cgtgaagtac ctgatacggc agcccggcaa
    26881 cagcgttctg atacgcagcc acaacagcgg tttctatggc gacgaaaacg cccccttgga
    26941 cagcctgacc gttatcggca gggtattttg gtggagcgtg ctggattgaa aaatgttgct
    27001 attacgacga gataatattg atagggcttt caagattgtc aaaaataggc gttttgattc
    27061 cccttggtgg cctggtgagt acgatgccgg tatgaatttc cttggcgtac aaggagagtt
    27121 gaaggttcac gagctgcatc acagaacagc aaccctgtgc tttgagtggc ttggcgaagt
    27181 atctgcgccg cgcagaaaag agaactacaa agacctcaag ccaaatgtat tgtatgactt
    27241 tgatggttcc ggtaagcatt ttgccaaccc tgacgcaagg tatctattgc ccgtcggttc
    27301 aagcggctta atcttaaaac atatccaaat cgatgacgaa gacactctgt tgcggctatg
    27361 gtgcgcacga aatatcccaa tgccacaccg gctatctaaa atcccgatgc ttcggcagta
    27421 ttatctaagc aaggcatggc acgaaattta tgctatcaac caacacctaa ggaaaacgaa
    27481 gctgatagtt gatgtggcat acggccccac agattaaaca acccgcccgc attatgcggg
    27541 cttttttcat gccccgccga acctgaaaac aacacaaaac cgacaaagcc gccttaatag
    27601 gcggtttttt tgcgcctgcg aaatctcaaa aataaattct tttaataatc aaaatgttta
    27661 taaatcttaa acagattgtt gcatattatt aaacgctatg tttaaataca cccatcgaaa
    27721 caaacaacag ccacatggag taccgacatg gaaaccatca ccatccctaa agaaaatttc
    27781 gacgctttgc taaatctcgc aagaaccgcc gtcgccctga acgaaaattt tattccaaaa
    27841 ataaattacg gagcatccac cataccagca gccggctttg ccgcacttaa cgagtttgga
    27901 atagctcgct ccaccgtgga atctttggaa attctcaaaa ttaaataacc tcctcggtat
    27961 tgtcatcccg tgataccggc aacctaacta acccctcttt aaaggaaaat caaaaatgga
    28021 aacccaagaa aagaaatttg ttcctgcctc caagcaaata ccgaccgtaa atagcggctg
    28081 gttagaccgt gaattaggcg aagccatgag tgaagcggtg cgtgcctgcc ttgctcacgg
    28141 taaacagtca gaaattactg tcaagctcaa aatccaaccc caaaacatcc aaagcggaac
    28201 ggtaaaaatc agccacgatg tagcaaccaa actgcccaaa gaaaaacgcg aaggcggcat
    28261 cgtctttgct acacctgacg gcaacatcca agccgacgat ccggcacaag gaaaattgaa
    28321 actcaaacaa gttcccaata cgtcaagcac gttgaaaatg gtcagatcca actaactcaa
    28381 acccaaaagg aaatctaaaa tggaaaccca agaaaacatg attaaaaccg ccttacaagc
    28441 agctcaaaaa cctttttttg agtttgcacc gaacaatact ctgcttgtat tcacaccaga
    28501 ccaagacggt ggctggagat acaaatcaca ccccgaattg atgcaaaacc cgtaccgcaa
    28561 gtgcggcaaa ttcctcatgc acgataccgc cagtcttatt aagtttgtac aaaaacacaa
    28621 acaggacggc acacaaatct acattgatgc cgatttcaaa tcagggcgta ttgatgtcac
    28681 cgccgtcatc aacggccata cgcaacaagc tcctggctgg ctcgattttt atgccgtata
    28741 caccccgcaa cacactacat cggcatccaa ctggctgaac aacaatgcgc accgcatgaa
    28801 tcagatggag ttttcccatt tcctgaccaa caatgcccgc aacatcgtat ccaaaaatcc
    28861 cggtaacgaa aattccgttt acccgaccgc cgccgaagta ttggatttcg cgctcaatct
    28921 cgagtacacc gaaaaaacca ccttcaaaca aggctatcgt gaacaggacg gcagaatcaa
    28981 ctttaccttc caatccgaag actcagggca aacagagaaa aacctcaaaa tgtttgaacg
    29041 tttcggcatc gagttcaccc cgcatcaagg cggtgcatcc tactttgttg aagccctgtt
    29101 gaaattccgc atcgacaaaa acagcggcgc actcgtcctg tggtacgaat tgcagcaaat
    29161 cgatgctgta atcgaacaag cggcaaaaga catttccgaa gccgtacaaa aagccttccc
    29221 tgaaatcgac atctatttcg gcataatcgc ctaaaaaaaa aggtcgtctg aaattgtgaa
    29281 ccttcagacg atctccacaa aaacccaact ccgaaagacc ccaaaatgac catcacagaa
    29341 gaatactcca tcgacatccg cgtaaccgca gaacagggga aaaacgacta cggctacccc
    29401 accgaacgct acggatgcga catcatcaac acagacgggg agctgcttgt cggcatagag
    29461 ccagagtaca aaaccccctt tgccgccgtc agaaaggcgc tcatctgtct ggcaaaagac
    29521 aacctcaaaa acgctgcctg atattaagcc gttaccccca ataacgagga atcaaaatga
    29581 aatacttgat ccgcaccgcc ttactcgcag tcgtagccgc cggcatctac gcctgccaac
    29641 cgcaatcaga agccgcagtg caagtcaagg ctgaaaacag cctgaccgct atgcgcttag
    29701 ccgtcgccga caaacaggca gagattgacg ggttgaacgc ccaaatcgac gccgaaatca
    29761 gacaacgcga agccgaagaa ttgaaagact accgatggat acacggcgac gcggaagtgc
    29821 cggagctgga aaaatgaact ttcaggaaga aaacgagaac atcaagaatg acatagagat
    29881 taatctcttg cattccgctg aagccgacag cgtggaggca atgatggact tggcggttta
    29941 cgggctggcg gcgatggttg ccaaacacaa caaaacgcgc ggcgagcagc ttgtgttaca
    30001 ggcgattgcc ggtcatatgc ggaagctttt ggccgcgctt cccgaaaccg agtcattggt
    30061 gcagaccggg aaggtttacc gccgacttga agatttgatt tttaaaacgt atttgccgga
    30121 gcagtaaaga tgaacacgaa tcaagatacg attccatttg gcggcaacct tgtgatttgc
    30181 tgttcgacgg gaaacggcgg ggacgggcgg ttttcttgtc tgattaccga tcagataccg
    30241 gatttaaatc ttgtcagaag cgggcaggcg ttcccgatgt tcatttatga gtacgaaact
    30301 agagaaaaaa ggaaagcctg atggacaccc tattaaaaat catcatcgcg ctgtcatttt
    30361 ccggcgctga ggcattggcg gtatggcttt tcatcacggc cgccgatgcc gtattacgcc
    30421 gcttcccgaa accgagtcat tacaggagag taaaaaaatg aacatcaacg aactgggcgc
    30481 aaggatagac cgcccgacca tccgcgaact gattgcctac gcaacctgcc gcaaccgccc
    30541 catttcaaac tcgacactgc tgcgtatgga aaaagacgga cggataccgt gccgtctgaa
    30601 aaccccactc acatcccccg tatgggacac ccgcgaagtt ttggaagccc tggggttaca
    30661 gcaataaaaa aacgcccgat tagggcgttt tcacattcag acggcttttg tattccctac
    30721 tgcatcaaac cgacgacagg ttgcggattt cgggcagcat cgggcggatt tttgccgcgt
    30781 gttccgcgtc ggcgtgtgcg tttaaggctt cgagggcgtt tgcggcggct ttgaggcggc
    30841 tgcgtgtttc cgcccagacc gtccacatcg ttaccgcctg tttgcagccg agctgcttca
    30901 gcggcaggga aacgtctctg cccatttgga tggcccacgc gccgtatctg acggcaacgg
    30961 cgaggtcgta cagggcgttg ccgctgatgg gcagggcagg ttgcggtgcg ggtaacggtt
    31021 cgcggtcgag gacttcgccg tacagcacgc cgttttcaac tgccacgcgg ctcatcacgc
    31081 ttaaaacttc ggggaactgt tcggcaggta cttctttgta gctgcatccg aacttgcttt
    31141 tgacggcaga ccaaagggta atggcgatac gcgcctgcgc ttctttgggt gcggatttgg
    31201 tcagggcgtt gtgcagtttt ttgacggctt cgatttgttc gccggtcaag ccgtccggaa
    31261 gggcgcgggt gggtttgggg gtaactgttt ttatgccgtc tgaaattttg ccgttaagta
    31321 aaatttcaat ctgctcatcg caccaaaccg caaatttcgg attaagccaa cgggcaaagt
    31381 gaatagcgag tttgggatgc agccatgtgc cttgctcact gccaccacgc ttcacgataa
    31441 ctatttgatt tgcttccgtt aggatttttc tcctaacgct taaattctca gcaagtgcag
    31501 agatatattg ttgagtttgt tcacttttta ggtagtcttt aggtaacttg ccaaagtgag
    31561 atgcaatggc ggttgcattt aaaaaaccgt cttgacggaa agatacaggg gtgttaccaa
    31621 aattgagaac agatacgttc atgatagttt cctagtttag tttcgaaaga cccaaatggg
    31681 tggtcgggag gttcgaaaac ctactagaaa aggccggcgt tattcccctt gcgggtattg
    31741 tattccgcac cctcccgacc ataggaaact agttcggata tatcgaaaca aacaaccaaa
    31801 caagaaaact tatggacgta aaaaattcac gctgacgggg tgaatgccgt tctagtagag
    31861 gttttcgacg cctcgtgttt cgtaatatat ccaatctttc tattttctgc aagcataaaa
    31921 aagccgccat gtggcggata gggtcgcggt cttcaacagc atgtaggatt taggaatgcc
    31981 caaattgggc gcaggggtgt tgaaaacacg caaacagacg cgccgccagc cttacgggta
    32041 ggcgcacccc cacataggag taaatcgatt tgatacgtat agacgtaaaa aattccactc
    32101 tatcgtgttg gatatacgct gtttgtcagg tgttttcaag caccgtggga aatattatag
    32161 agttatggaa atgtgtcaag agaattagcc caaatgggcg gacgcgcggt taagaaccca
    32221 cataggaggg cggacttatt cccctttcgg gtcttgtatt cgtcgcccac gcggtcatag
    32281 aaacttcctg ctatcgaaac aaacaacaag gaaagaaaac tatagacatg aaaaaatcac
    32341 attgacggag tgattgccgc tgtagtgtgg tttctgacgc cacgaacagg aatataaaac
    32401 aaaacccctg cacatgcaag gggtttccca aaaaaccgta ggcggcaaac tgaaaggccg
    32461 tctgaatttc agacggccta tgttgcggcg gatgttaagc tattaagcta tttggttttc
    32521 agaggctttt tcttccattt tcgggctacg gcttcaaatt cttgaaaggc cgtcggtgcg
    32581 ctcctgatac ggcgtatttc aaaaatgaag ctgcttaggt tgtcccagtc acgtaacagc
    32641 atggagtatt cgaaatcttt atacattttc tcgtgcagtg ctccgcccaa tacgcccgca
    32701 cagacaaatt cgcgctggtt taaaactgtc agtatggctt cacggtcttt cttcttgtcc
    32761 ggggtatccg atgtataggt ggcgagtatg catccgtctg tttttgccag cccgtttact
    32821 atggttatgg cttcttgaag ggcggcattg ttacgttcgg ccatgatcat gtcgatggtg
    32881 gcgcgctttt tggcgttttc tgtattcctc atgatgccgt aagcggcaac aaaaacgccg
    32941 ataacagtca atatcggcgt tgctatctgt attaggttgt cagtcattgc cgtcccagcc
    33001 gtctgaaagg cggaaatcac ggctttccga ataaatatgt cccattgtca tccccttaag
    33061 ctgatgttga aaataaatcc ttgcgtcgga atatacggca ttgcttgact attttcaaga
    33121 ttctgtacct cgtgaaccgg actatacaaa aaaaccgcct tcgtgtaaag cggttcttaa
    33181 atcgcccgtt aaggcggaca caacgatagc caaactggaa caggaggcgg caaaggcggg
    33241 tttgtccaaa acagccttga ttgaaaggct gattggggat ttgtaggcgt ttgcagatac
    33301 gacaaggggc gcattccgcg ccccatcaca cgcacggacg gcttgtcatc gcctgtcgcc
    33361 cgtgcgcggc tgcccatatt tcagaacagt cttgcaagcc cctttaaggg aacggtttta
    33421 ttctagtaca gtttgaatgc cttggcaacg gctgttttaa tcgcctgaaa atcctcttca
    33481 ctgattattg gaatgcagcg gtcgcgccct ttgggtttgt atcggtctaa tcgtgccaat
    33541 ccgactgttg ccgtcatgtc gcattttgcc caacattgga tgtgcggctt gtccggtaag
    33601 gggtttccac tcattttgtg gtggtagtcc gccaaaggga caggttctgt gctgcttaag
    33661 ggtacgaccg ttaccagttt gccgttgtgc ctgtttcgcg ctatgacgac gacagggcgt
    33721 ttcttgacca tttccggttc ttcataaccg cgaaagtcgc acatgataac cgaacgttcc
    33781 cttggttgga attttaaagg cattagccgc tcctgacgat gacaggctgc tattatagca
    33841 gttcttacac aaaaaaccgc cttcgtgtaa agcggttgca aaaaagcctt ccaataaaaa
    33901 tgcggaaacg gttttttatt tgcgtttccg cataatacaa acacacacac aaaaaaatca
    33961 ttttccgttt ttggcaagcc tcaaaacatc attcccccac cgttccagcg catccttacg
    34021 ctcctcccaa agctccgagc ggttgtaagc cgtttgcgtc ctcgtcccca acgaatgggc
    34081 aagcagcttt tccgccacat cattatccac cttcagaacc tcgcgcaaat aagtacgcgc
    34141 aagcaagcgc aaaccgtgcg ccgtcgtatc cagccccgcc cgctgcatcg ccacgcgcgg
    34201 actttcctta ttgatatgcc cttgaaaatt cacactttca aacacaaacc gcccgttcac
    34261 attcaacgcc cgcgcctgat ccaacaccca ctgcatcgcc cgcgacagcg gcacatcatg
    34321 cccccgccgc tcctttttcc gttcggcggg gatacgccaa acctccccgt ccaactccga
    34381 ccactccatc aacgccgcct cctgaatccg cgtcattgtc aacagcagcc aatagataca
    34441 aagccgcgtt acaggatgga tacgcaccct gcccgcataa accgcaaatt cattgcgctg
    34501 ctccaaaaaa tcaatcaggc gcggcaattc agacggactc aacgccgcca tattccccgt
    34561 tttcgcccgt tcaaacacac ccgaaccgat ttgcgcgaca gggttgattt ccatcattcc
    34621 cgaaccgacc gcaaacgcaa acaccatctt cagactgttt ttcgttttgc gcaacgtatc
    34681 aacgataccg cgcgcctcca tcacacgcag acagccgacc acatccgccg tcctgacttg
    34741 acgaatatca agattgccga tagccggaaa aacccaccgc tcaaaattcc gcataacctg
    34801 tccggcatac ttttcagacc gccccttcga ccaacgcaca aaccaatcac gcgccacctt
    34861 ctcaaaagca aaatccgccc gcaccttctt attgacgaca ttttccccgt gcgcccgttt
    34921 tcggcgcacc tcctcccgcc attcccgcgc atcggccagc gaaaaatcag gataccgccc
    34981 cagcgaaatt gtctgctgcc ttccatcctg cacaaacgac agcttccaac tccgcccgcc
    35041 cgtcgggtag acccacaaag ccagcccgcc cccgtccgac aacttataca gcttatcgcg
    35101 cggcttcgca tttttaacct gatttgccga cagcggcgta atgattttcg ccattatggt
    35161 aatttcccat ttatccaaaa attaccatac acattaccat aaaaaaaatg caataagaag
    35221 atgccgcaag attgcaaatg atttactttg acgcgttttg atagggcaaa ccgatgattt
    35281 ttatatggta attgacacaa cttgaacaaa aaagaaccgc cctgaatcag ggcggttttg
    35341 ttttctggcg gaaacggtgg gattcgaacc cacggaggat ttgcaccctc agcggatttc
    35401 gagtccgctg cattcagcct ctctgccacg tttccgataa tgaagtaaaa ccaaataaaa
    35461 atgccgatgc tttatgctac ttcattttta tttggttttt gacctcaagg attggcggaa
    35521 gcggtgagat tcgaactcac ggagggctat caaccctcga cggttttcaa gaccgttgca
    35581 ttaaaccgct ctgccacgct tccatcttct tgaagaagac gaataataat gaagtttata
    35641 cattttgcca agcacttttt tcggaaaata cttaatttat tgttttcact ttatttgttc
    35701 cgaacgcata aacacccatt cactttcatt ggaagccgcg tcattgaatg cgtagccttc
    35761 gtaattaaaa tttttcagca tttcaggatc ggtaatattg tgttctgccg catagcgcac
    35821 cattaatccg cgcgcgcgct tggcatagaa actgatgatt ttatatttac cgtttttttc
    35881 gtctttaaat atcggggtaa tcagccgcgc ccgaagtgtt ttcgtgttga cggacttgaa
    35941 atattcctgt gaggcaaggt tgacaagcgt attgctgcct gcttgggcaa gcgtgtcatt
    36001 taaaaggttg gtaatgatgt ctccccaaaa ctcatacaaa ttcttcccgc gcaaattggc
    36061 aaatgccgtc cccatttcca aacggtaagg ctgtatcagg tccagtggac gcagaaggcc
    36121 gtacaggccg gacagcaggc gtacgcgccc ttgcagatat tgtatttgat cggtattcaa
    36181 tgtgtttgca tccatacctt cgtaaacatc gccgttgaac ataaagaccg cctgtttggc
    36241 gttttccggc gtaaacggcg tgttccattc tgcattgcgc tgcgcgttta agagggcaat
    36301 tttgtcggaa acgtgcatca gttcggcaat ctgttgcggc gcaagctcgc gcaactgctg
    36361 cattagaatg tcggactctg ccagcaggtc gggttgggta aactcgctga caggggcagg
    36421 gtctttttca ttaaggttct tcgcagggga aaggacaaaa aacataatct gctcggtatt
    36481 gtgtcaaaca cggggatttt aagtttaaac gtgtttgcgg gcaagccgat taaaagtgaa
    36541 gtatagtgga ttaaatttaa accagtacag cgttgcctcg ccttgccgta ctatctgtac
    36601 tgtcttcggc ttcgtcgcct tgtcctgatt tttgttaatc cactataaat accgttacag
    36661 caaattcaac cgtagaatat tgaaaaatgc cgtctgaaca aaagttcaga cggcatttcc
    36721 gattccttac cgatacagtg aaactatgtc ttccgcagct ttgacacaag ttgcgacatc
    36781 ggcaaccaaa gcgatacgga cataaccttc cccgggattg ccctgttcgg tatcccgtgc
    36841 caaaaagcgt ccgggtaata cttggatagc ggctttttgc cataaattgc gtgcaaatgc
    36901 caaatcgtcg ccatcgggga ctttcaacca gatgtaaaac gaggcatccg gtaatttgac
    36961 gtcaaatacc tgttgcagga taggaataac ccattcaaac ttttcctgat acaggcggcg
    37021 gttgtcaata acgtgctgtt cgtcattcca ggcggcaata ctggcacgct gtacgggaat
    37081 gctcattgcg ctgccgtgat aggttctgta aagcagaaaa tttttaagca gttcggcatc
    37141 gccggcgaca aaaccggaac gcaggcctgg aacattggac cgcttggaca aactggtgaa
    37201 cataagcagt ttttgcctgc ttcgccccaa ctgtgcagcg gcctgcaggc agcccaaagg
    37261 cttgttgccg tcgaaataga tttcggaata gcattcgtcc gaggcaataa tgaaaccata
    37321 tttgtcctgc aaatcaaaaa cttctttcca tccgtccaaa tccagcacgc tgccgctggg
    37381 gttgttgggc gagcagacga acaccagttt ggtgcgtttc caaacctctt cggaaatact
    37441 acgccaatcg gggttgaaag acggcgcggg gcaattggca aaatggattt caccgccgcc
    37501 caaaagtgtc gcaccttcat aaatctgata aaagggattc gggctgacga ttacgggttt
    37561 gaggccgtct gaaacagggt tcaacacggt ttggacaaaa gaaaacaacg cctccctact
    37621 tcccaaaacc ggcagaattt cggtgtcgga attcagcgtc aacccatcat aacggcgttt
    37681 taaccagttc gcacacgcct gacgcagttc aggcaaaccg gccgtcagcg gatatttttc
    37741 caactcgtgc aatgaggcgg tcagcgcatc cgtaatgact ttcggtgtcg gatgtttcgg
    37801 ttcgccgata tgcagtggga cggcttccag accttcgggg gcggaaatgc cctgcatcgc
    37861 ttcacgcagt cgggcaaagg gatagggttt gagttggttg agtaaggtat tcatgatttt
    37921 ctccggttgt cggtatatcg gaagatatgc cgtctgaacc tgacgtgccc ttcagacggc
    37981 attttatatt caatgcaaac ccgtactgcc gaagccgccc tcaccccggc tgcttccgac
    38041 aaattcctcg acacgtttga aacgcgcctg cacgattggc acgacaacca tctgcgcgat
    38101 acgctcaaac ggtttgacag taaacggttc gctgcttctg ttccataacg acaccttcaa
    38161 ttccccttga taatcggagt caatcaaacc gaccaaattg cccaaaacaa tgccgtgttt
    38221 atgccccaag ccggaacggg gcagcaaaac ggcggcatat gcgggattcg ccaaataaat
    38281 tgccaaaccc gtcggcacaa gaaacgtttc acccggctgc aaaacgactt cctcatccaa
    38341 acaggcgcgc aaatctaaac ctgcagaacc cttcgttgca tagacaggga caacatccgc
    38401 catccgttcg tccaatactt tcatttctac ttcaatattc atcgtcttgc tcctgcatac
    38461 ggccggtttc aaagatggga gattatacac aagccgtgtt tacgctgaaa cacagcaaat
    38521 aggttttgtt ttgaaatact ccgtctgtgt ataatgcccg accttcttac atatcaatat
    38581 taatatgaca cacataagct cgccccgtaa cgaatttata cgcggcatca aagaaagttc
    38641 gcccatgctg atcgggcttt tgccttgggc attaatactc ggtatgcagg gtggacaaaa
    38701 aggcatgagc tggctggaaa tgttgttgat gaccggtatg aacttcgccg gcggctccga
    38761 gtttgccacg gtcaacctgt gggcggaacc tctgccgata ctgcttatcg ccaccgtaac
    38821 ctttatgatt aattctcggc atatcctgat gggggcggca cttgccccgc acctgaaaga
    38881 aataccgctg aaaaaagccg tgcccgcact gttttttatg tgtgatgaaa gctgggcgat
    38941 ggcattctcc gaaatccaaa aacggaaagc agccggtttg cccgcattca atatgcct
//
LOCUS       DAWGKF010000002        32223 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.002, whole genome shotgun sequence.
ACCESSION   DAWGKF010000002 DAWGKF010000000
VERSION     DAWGKF010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 32223)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32223)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32223
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.002"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(375..650)
                     /locus_tag="WHR07_000051"
     CDS             complement(375..650)
                     /locus_tag="WHR07_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEZ2129330.1"
                     /translation="MNASNWSVYLILCENSAFYCGISPNPQQRLAAHTTGKGAKYTRV
                     FKPVAMRIVAGGMDKGTALRQEIAVKKLTAAQKRQLWEQAEKMPSET"
     gene            complement(647..1930)
                     /locus_tag="WHR07_000052"
     CDS             complement(647..1930)
                     /locus_tag="WHR07_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ2129331.1"
                     /translation="MTVSKSGFIGQIFSRNMLVCIFTGFTSGLPLYFLINLIPAWLRS
                     EQVDLKSIGLMALIGLPFTWKFLWSPLMDAVRLPVLGRRRGWMLLTQAGLLAALAAYA
                     FLNPRNHLPLIAGLSVLVAFFSASQDIVLDAFRREILSDEELGLGNSVHVNAYRVAAL
                     IPGSLSLVLADRMPWSEVFVITSLFMLPGLLMTLFLAREPVLPPAVPKTLKQTVVEPF
                     KEFFTRKGIASAVCVLLFIFLYKLGDSMATALATPFYLDMGFSKTDIGLIAKNAGLWP
                     AVAAGILGGVWMLKIGVNKALWLFGAVQAVTVLGFVWLAGFGPFDTVGTGERLMLAAV
                     IGAEAVGVGLGTAAFVSYMARETNPAFTATQLALFTSLSAVPRTVINSFAGYLIEWLG
                     YVPFFQLCFALALPGMLLLLKVAPWNGEKTQDAGR"
     gene            complement(2084..3502)
                     /gene="glnA"
                     /locus_tag="WHR07_000053"
     CDS             complement(2084..3502)
                     /gene="glnA"
                     /locus_tag="WHR07_000053"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEZ2129332.1"
                     /translation="MSIKNAVKLIEESEARFVDLRFTDTKGKQHHFTVPARIVLEDPE
                     EWFENGQAFDGSSIGGWKGIQASDMQLRPDASTAFVDPFYDDVTVVITCDVIDPADGQ
                     GYDRDPRSIARRAEAYLKSSGIGDTAYFGPEPEFFVFDGVEFETDMHKTRYEITSESG
                     AWASGLHMDGQNTGHRPAVKGGYAPVAPIDCGQDLRSAMVNILEGLGIEVEVHHSEVG
                     TGSQMEIGTRFATLVKRADQTQDMKYVIQNVAHNFGKTATFMPKPIMGDNGSGMHVHQ
                     SIWKDGQNLFAGDGYAGLSDTALYYIGGIIKHAKALNAITNPSTNSYKRLVPHFEAPT
                     KLAYSAKNRSASIRIPSVNSSKARRIEARFPDPTANPYLAFAALLMAGLDGIQNKIHP
                     GDPADKNLYDLPPEEDALVPTVCASLEEALAALKADHEFLLRGGVFSKDWIDSYIAFK
                     EEDVRRIRMAPHPLEFEMYYSL"
     gene            complement(3776..4153)
                     /locus_tag="WHR07_000054"
     CDS             complement(3776..4153)
                     /locus_tag="WHR07_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129333.1"
                     /translation="MKKMLCLAVFALGLATPAVAADWVLVDSNTATFGDADSRTDNSA
                     WFETRFAKPQKYGNGKFFNTAKTLEEMDCSGKRFRILTATWYSKSGNSIASYTPSYAE
                     WNYVIPGTLGEAQYKFVCNGYPR"
     gene            4324..5133
                     /gene="aroE"
                     /locus_tag="WHR07_000055"
     CDS             4324..5133
                     /gene="aroE"
                     /locus_tag="WHR07_000055"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEZ2129334.1"
                     /translation="MTALPRYSVFGNPVAHSKSPQIHQQFALQEGVDIEYERICADIG
                     GFAQAVSTFFETGGCGANVTVPFKQEAFHLADEHSERALAAGAVNTLIPLKNGKLRGD
                     NTDGIGLTNDITQVKNIAIEGKTILLLGAGGAVRGVIPVLKEHRPARIVIANRTRAKA
                     EELAQLFGIEAVPMADVNGGFDIIINGTSGGLNGQIPDIPPDIFQNCALAYDMVYGCA
                     AKPFLDFARQSGAKKTADGLGMLVGQAAASYALWRGFTPDIRPVIEYMKAM"
     gene            5135..5836
                     /gene="mtgA"
                     /locus_tag="WHR07_000056"
     CDS             5135..5836
                     /gene="mtgA"
                     /locus_tag="WHR07_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HEZ2129335.1"
                     /translation="MFRIVKWLIALPVGIFIFFNAYVYGNIITYRAVAPHRTAFMSMR
                     MKQFEQEGRDVALDYRWVPYNRISVNLKKALIASEDAHFAGHGGFDWGGIQNAIRRNR
                     NSGKVKAGGSTISQQLAKNLFLNESRSYIRKGEEAAITAMMEAVTDKDRIFELYLNSI
                     EWHYGVFGAEAASRYFYQIPAAKLTKQQAAKLTARVPAPLYYADHPKSKRLRNKTNIV
                     LRRMGSAELPESDTD"
     gene            complement(6039..6114)
                     /locus_tag="WHR07_000057"
     tRNA            complement(6039..6114)
                     /locus_tag="WHR07_000057"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6079..6081),aa:Phe,seq:gaa)
     gene            complement(6305..7039)
                     /gene="lptB"
                     /locus_tag="WHR07_000058"
     CDS             complement(6305..7039)
                     /gene="lptB"
                     /locus_tag="WHR07_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HEZ2129336.1"
                     /translation="MSANVSRLVVQNLQKSFKKRQVVKSFSLEIESGEVVGLLGPNGA
                     GKTTSFYMIVGLIAADAGSVMLDGQELRHLPIHERARLGVGYLPQEASIFRKMTVEQN
                     IRAILEISTKDKSRIDGEVEKLLADLNIERLRNNPAPSLSGGERRRVEIARVLAMKPH
                     FILLDEPFAGVDPIAVIDIQKIIGFLKSRGIGVLITDHNVRETLSICDRAYIISDGTV
                     LASGKPDDLVGNEQVRSVYLGKNFKY"
     gene            complement(7113..7643)
                     /gene="lptA"
                     /locus_tag="WHR07_000059"
     CDS             complement(7113..7643)
                     /gene="lptA"
                     /locus_tag="WHR07_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HEZ2129337.1"
                     /translation="MIQKICKLFVLIAFFSASPAFALQSDSRQPIQIEADQGSLDQAN
                     QSTTFSGNVVIRQGTLNISAARVNVTRGGKGGESVRAEGSPVRFSQTLDGGKGTVRGQ
                     ANNVAYSSAGSTVVLTGNAKVQRGGDVAEGAVITYNTKTEVYTISGSTKSGAKSASKS
                     GRVSVVIQPSSTQKSE"
     gene            complement(7624..8205)
                     /gene="lptC"
                     /locus_tag="WHR07_000060"
     CDS             complement(7624..8205)
                     /gene="lptC"
                     /locus_tag="WHR07_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HEZ2129338.1"
                     /translation="MKIRWRYGIAFPLILAVALGGLSAWLGRISEVEIEEVRLNPDEP
                     QYTMDGLDGRRFDEQGYLKEHLSAKGAKQFPESSDIHFDSPHLVFFQEGRLLYEVGSD
                     EAVYHTENKQVLFKNNVVLTKTADGKRQAGKVEAEKLHVDTESQYAQTDTPVSFQYGA
                     SHGQAGGMTYDHKTGMLNFSSKVKATIYDTKDM"
     gene            complement(8202..8738)
                     /locus_tag="WHR07_000061"
     CDS             complement(8202..8738)
                     /locus_tag="WHR07_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ2129339.1"
                     /translation="MQAISPELQARAAKIKLLILDVDGVLTDGRIFIRDNGEEIKSFH
                     TLDGHGLKMLQASGVQTAIITGRDAPSVGIRVKQLGINYYFKGISDKRAAYEELRAQV
                     GVEEAECAFVGDDVVDLPVMVRCGLPVAVPDAHWFTLQHAAYIAKRPGGAGAVREVCD
                     LIMQAQGTLGAALNEYIK"
     gene            complement(8803..9777)
                     /locus_tag="WHR07_000062"
     CDS             complement(8803..9777)
                     /locus_tag="WHR07_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HEZ2129340.1"
                     /translation="MAENGKYLDWAREVLHTEEEGLREIATELDENFVLAADALLHCK
                     GRVVITGMGKSGHIGRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSG
                     ESDEIAAIIPALKRKDITLVCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTT
                     AVMALGDALAVVLLRARAFTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGT
                     PLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHP
                     KTISAERLATEALKVMQANHVNGLLVTDADGVLIGALNMHDLLAARIV"
     gene            9874..10929
                     /gene="tal"
                     /locus_tag="WHR07_000063"
     CDS             9874..10929
                     /gene="tal"
                     /locus_tag="WHR07_000063"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEZ2129341.1"
                     /translation="MTILSDVKALGQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNP
                     AIFQKAFAGDALYADEVAALKQQDLTPKQRYETMAVADVQAACDVCLAEHESTGGKTG
                     FVSLEVSPELSKDAQGTVEEARRLYAAIGCKNAMIKVPATDAGIDALETLVSDGISVN
                     LTLLFSRVQTLKAYAAYARGIAKRLAAGQSVAHIHVVASFFISRVDGALDTTLPDHLK
                     GKIAIALAKAAYQDWAQYFGSPEFAALETQGANRVQLLWASTGVKNPAYPDTLYVDSL
                     IGAHTVNTVPDATLKAFIDHGTAKATLTEGADEAQAQLAETAALGIDVETLAARLQED
                     GLKQFEEAFEKLLAPLV"
     gene            11083..11373
                     /locus_tag="WHR07_000064"
     CDS             11083..11373
                     /locus_tag="WHR07_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129342.1"
                     /translation="MAKALEIISPNEIYSDLIFKDPVPPHTIYTELMKLVSRNASNER
                     IADRAFDFFSSGLMDGSATEEQYNALYDLTLLEEPGMELNKDEIMALINSLK"
     gene            11390..12277
                     /gene="gluQRS"
                     /locus_tag="WHR07_000065"
     CDS             11390..12277
                     /gene="gluQRS"
                     /locus_tag="WHR07_000065"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HEZ2129343.1"
                     /translation="MYTGRFAPSPTGLLHIGSLLTAAASYADARSNGGKWLVRMEDLD
                     PPREMPGAASHILHTLEAFGFEWDGEVAYQSRRYALYEETLCRLQTAGLVYPCHCSRK
                     DWQAAAVHGADGFVYNGRCRNPQQRPALQGKQPAWRIRVPDRDIGFSDGIVGGYAQNL
                     ARDIGDFVLLRADGYWAYQLAVVADDAEQGVTHIVRGQDLLVSTPRQIYLQQCLGVPT
                     PQYAHLPLLTNAQGQKWSKQTLAPALDLNRREQLLRQVFRYLKLPEAPETDRPAELLD
                     WAVAHWDMGKVPKHAITTP"
     gene            complement(12347..13357)
                     /gene="dusA"
                     /locus_tag="WHR07_000066"
     CDS             complement(12347..13357)
                     /gene="dusA"
                     /locus_tag="WHR07_000066"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HEZ2129344.1"
                     /translation="MNDNTHTLPPRHLSVAPMLDWTDRHYRYMARQITRNTWLYSEMV
                     NAGAIVYGDKDRFLMFNEGEQPVALQLGGSDPSDLAKAAKAAEAYGYNEVNLNCGCPS
                     PRVQKGSFGACLMNEVGLVADCLNAMQDAVGIPVTVKHRIGVDRQTEYQTVADFVGTL
                     RDKTACKTFIVHARNAWLDGLSPKENRDVPPLKYDYVYRLKQEFPGLEIIINGGITTN
                     EAIAGHLQHVDGVMVGREAYHNPMVMREWDRLFYGDTRSPIEYADLVQCLYTYSQAQI
                     QAGRGTILRHIVRHSLGLMHGLKGARTWRRMLSDATLLKDNDGSLILEAWKEVERANT
                     RE"
     gene            complement(13388..13879)
                     /locus_tag="WHR07_000067"
     CDS             complement(13388..13879)
                     /locus_tag="WHR07_000067"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HEZ2129345.1"
                     /translation="MRAVIQKTVGAKVDVVSENGTETCGKIDGGFVVLLGVTHSDTEK
                     DAHYIADKIAHLRVFEDEAGKLNLSLKDVGGAVLLVSQFTLYADAASGRRPSFSQAAP
                     AEQAQQLYLRTAELLRGHGIHVETGRFRTHMQVSLCNDGPVTILLDSFMTRISPKMKV
                     VPD"
     gene            complement(13953..14711)
                     /locus_tag="WHR07_000068"
     CDS             complement(13953..14711)
                     /locus_tag="WHR07_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ2129346.1"
                     /translation="MKQKKTAAAVIAAMLAGFAAAKAPEIDPALVDTLVAQIMQQADR
                     HAEQSQKPDGQAIRNDAVRRLQTLEVLKNRALKEGLDKDKDVQNRFKIAEASFYAEEY
                     VRFLERSETVSESALRQFYERQIRMIKLQQVSFATEEEARQAQQLLLKGLSFEGLMKR
                     YPNDEQAFDGFIMAQQLPEPLASQFAAMNRGDVTRDPVKLGERYYLFKLSEVGKNPDA
                     QPFELVRNQLEQGLRQEKARLKIDAILEENGVKP"
     gene            complement(14782..15648)
                     /locus_tag="WHR07_000069"
     CDS             complement(14782..15648)
                     /locus_tag="WHR07_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ2129347.1"
                     /translation="MKAKILTSVALLACSGSLFAQTLATVNGQKIDSSVIDAQVAAFR
                     AENSRAEDTPQLRQSLLENEVVNTVVAQEVKRLKLDRSAEFKNALAKLRAEAKKSGDD
                     KKPSFKTVWQAVKYGLNGEAYALHIAKTQPVSEQEVKAAYDNISGFYKGTQEVQLGEI
                     LTDKEENAKKAVADLRAKKGFDAVLKQYSLNDRTKQTGAPVGYVPLKDLEQGVPPLYQ
                     AIKDLKKGEFTATPLKNGDFYGVYYVNDSREVKVPSFDEMKGQIAGNLQAERIDRAVG
                     ALLGKANIKPAK"
     gene            complement(15697..15975)
                     /locus_tag="WHR07_000070"
     CDS             complement(15697..15975)
                     /locus_tag="WHR07_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HEZ2129348.1"
                     /translation="MPAVDLIRERLQTLDPLVLEIGDESHLHKGHAGNTGGGHYAVLV
                     VSGRFEGVSRLNRQKTVKSLLKDLFSGGMIHALGIRAATPDEYFHTAD"
     gene            complement(15975..16265)
                     /locus_tag="WHR07_000071"
     CDS             complement(15975..16265)
                     /locus_tag="WHR07_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEZ2129349.1"
                     /translation="MEYFMLLATDGENVYEARMAARPEHLKRLETLKSEGRLLTAGPN
                     PLPEDSNRVSGSLIVAQFESLDAAEAWAEDDPYVHAGVYSEVLIKPFKAVFK"
     gene            complement(16268..16798)
                     /locus_tag="WHR07_000072"
     CDS             complement(16268..16798)
                     /locus_tag="WHR07_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HEZ2129350.1"
                     /translation="MKFVSDLLSVILFFATYTVTKNMIAATAVALVAGVVQAAFLYWK
                     YKKLDTMQWVGLVLIVIFGGATIVLGDSRFIMWKPSVLFWLGALFLWGSHLAGKNGLK
                     ASIGREIQLPDAVWAKLTYMWVGFLIFMGIANWFVFTRFESQWVNYKMFGSTALMLVF
                     FIIQGIYLSTCLKKED"
     gene            17106..19631
                     /locus_tag="WHR07_000073"
     CDS             17106..19631
                     /locus_tag="WHR07_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FimV family protein"
                     /protein_id="HEZ2129351.1"
                     /translation="MKNNRQIKLIAASVAVAASFQAHAGLGGLNIQSNLDEPFSGSIT
                     VTGEEAKALLGGGSVTVSEKGLTAKVHKLGDKAVIAVSSEQAVRDPVLVFRIGAGAQV
                     REYTAILDPVGYSPKTKSALSDGKTHRKTAPTAESQENQNAKALRKTDKKDSANAAVK
                     PAYNGKTHTVRKGETVKQIAAAIRPKHLTLEQVADALLKANPNVSAHGRLRAGSVLHI
                     PNLNRIKAEQPKPQTAKPKAETASMPSEPSKQATVEKPVEKPEAKVAAPEAKAEKPAV
                     RPEPVPAANTAASETAAESAPQEAAASAIDTPTDETGNAVSEPVEQVSAEEETESGLF
                     DGLFGGSYTLLLAGGGAALIALLLLLRLAQSKRARRTEESVPEEEPDLDDAADDGIEI
                     TFAEVETPATPEPAPKNDVNDTLALDGESEEELSAKQTFDVETDTPSNRIDLDFDSLA
                     AAQNGILSGALTQDEETQKRADADWNAIESTDSVYEPETFNPYNPVEIVIDTPEPESV
                     AQTAENKPETVDTDFSDNLPSNNHIGTEETASAKPASPSGLAGFLKASSPETILEKTV
                     AEVQTPEELHDFLKVYETDAVAETAPETPDFNAAADDLSALLQPAEAPSVEENVTETV
                     AETPDFNATADDLSALLQPSEVPAVEENAAEIVADDLSALLQPAEAPAVEENVTKTVA
                     EIPDFNATADDLSALLQPSEVPAVEENAAETVADDLSALLQPAEAPAVEENAAEITLE
                     TPDSNTSEADALPDFLKDGEEETVDWSIYLSEENIPNNADTSFPSESVGSDAPSEAKY
                     DLAEMYLEIGDRDAAAETVQKLLEEAEGDVLKRAQALAQELGI"
     gene            complement(19804..20220)
                     /gene="gloA"
                     /locus_tag="WHR07_000074"
     CDS             complement(19804..20220)
                     /gene="gloA"
                     /locus_tag="WHR07_000074"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HEZ2129352.1"
                     /translation="MRLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFV
                     GYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGP
                     MKHGTTVIAFVEDPDGYKIEFIQKKSGDDSVAYQTA"
     gene            complement(20245..21414)
                     /gene="lapB"
                     /locus_tag="WHR07_000075"
     CDS             complement(20245..21414)
                     /gene="lapB"
                     /locus_tag="WHR07_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HEZ2129353.1"
                     /translation="MDNELWIILLPIILLPVFFAMGWFAARVDMKTVLKQAKSIPSGF
                     YKSLDALVDRNSGRAARELAEVVDGRPQSYDLNLTLGKLYRQRGENDKAINIHRTMLD
                     SPDTVGEKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGKMAREARQHLLNIYQQDRD
                     WEKAVETARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTR
                     ANMILGDIEHRQGNFPAAVEAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLNRLT
                     GYMQTFPELDLINVVYEKSLLLKCEKEAAQTAVELVRRKPDLNGVYRLLGLKLSDMNP
                     AWKADADMMRSVIGRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKIEV"
     gene            complement(21425..21739)
                     /locus_tag="WHR07_000076"
     CDS             complement(21425..21739)
                     /locus_tag="WHR07_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1049 domain-containing protein"
                     /protein_id="HEZ2129354.1"
                     /translation="MKLIYTVVKIIILLFFLLLAVINTDAVTFSYLPGQKFDLPLIVV
                     LFGAFVVGIIFGMFALFGRLLSLRGENGRLRAEVKKNARLTGKELTAPPAQNAPESTK
                     QP"
     gene            22049..23047
                     /gene="ilvE"
                     /locus_tag="WHR07_000077"
     CDS             22049..23047
                     /gene="ilvE"
                     /locus_tag="WHR07_000077"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HEZ2129355.1"
                     /translation="MSRPVPAVFGSVFHSQMPVLAYREGKWQPTEWQSSQDLSLAPGA
                     HALHYGSECFEGLKAFRQADGKIVLFRPTANIARMRQSADILHLPRPETQAYLDALVE
                     LVKRAADEIPDAPAALYLRPTLIGTDPVIGKAGSPSETALLYILASPVGDYFKVGSPV
                     KILVETEHIRCAPHMGRVKCGGNYASAMHWVLKAKAEYGANQVLFCPNGDVQETGASN
                     FILINDDEIITKPLTDEFLHGVTRDSVLTVAKDLGYTVSERNFTVDELKAAVENGAEA
                     ILTGTAAVISPVTSFVIGGKEIEVKSQERGYAIRKAITDIQYGLAEDKYGWLVEVC"
     gene            complement(23291..24076)
                     /gene="fabI"
                     /locus_tag="WHR07_000078"
     CDS             complement(23291..24076)
                     /gene="fabI"
                     /locus_tag="WHR07_000078"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HEZ2129356.1"
                     /translation="MGFLQGKKILITGMISERSIAYGIAKACREQGADLAFTYVVDKL
                     EERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSG
                     DFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVM
                     GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLR
                     RNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSINALSTEG"
     gene            complement(24231..25052)
                     /gene="dapD"
                     /locus_tag="WHR07_000079"
     CDS             complement(24231..25052)
                     /gene="dapD"
                     /locus_tag="WHR07_000079"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HEZ2129357.1"
                     /translation="MSLQNIIETAFENRADITPTTVTPEVKEAVLETIRQLDSGKLRV
                     AERLGVGEWKVNEWAKKAVLLSFRIQDNEVLNDGVNKYFDKVPTKFADWSEDEFKNAG
                     FRAVPGAVARRGSFVAKNVVLMPSYVNIGAYVDEGAMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQAAPTIIEDNCFIGARSEIVEGVIVEEGSVISMGVFIGQSTKIFDRT
                     TGEIYQGRVPTGSVVVSGSMPSKDGSHSLYCAVIVKRVDAQTRAKTSVNELLRGI"
     gene            complement(25062..25292)
                     /locus_tag="WHR07_000080"
     CDS             complement(25062..25292)
                     /locus_tag="WHR07_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129358.1"
                     /translation="MPSERRRRGIKVPPPFCIDSGAEKAIPAARPIPKRQCSATARVL
                     LTNMRLRGTIAHSFQMNILPENTGKRPTKHLT"
     gene            complement(25262..26905)
                     /gene="pgi"
                     /locus_tag="WHR07_000081"
     CDS             complement(25262..26905)
                     /gene="pgi"
                     /locus_tag="WHR07_000081"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEZ2129359.1"
                     /translation="MNAFTRAWHALERHYQDTRHVLLRDRFACEPDRFERMHERLDGM
                     LFDYSKNRLGEDTLQLLCNLADAADLEGKMRALRTGAKVNNSEGRAALHTALRLPDGA
                     GAVYADGRDVLPEIRRELNRALKFAHSLDDGSYQGTTGKRITDFVHIGIGGSDLGPAM
                     CVQALEPFRRHIAVHFAANADPACLDAVLCRLNPETTVFCVASKSFKTPETLLNAQAV
                     KAWYRGAGFSESETACHFCAVSADTAAAAAFGIAAERVFAMYDWVGGRYSVWSPVGLP
                     VMVAVGGARFRELLAGAHAMDSHFFHTPPRRNIPVLMALIAVWYNNFQHADGQTAVPY
                     SHNLRLLPAWLNQLDMESLGKSRASDGSPAVCKTGGIVFGGEGVNCQHAYFQLLHQGT
                     RLIPCDFIVPMTAQGVEEGRSRFTVANAFAQAEALMKGKTLDEARAELADLPEAERER
                     LAPHKEFPGNRPSNSILLDRLTPYNLGMLMAAYEHKTFVQGTIWNVNPFDQWGVEYGK
                     QLAKTIIGELEGGTSVHDASTEGLMAFYRECRLKGGGAA"
     gene            27415..28647
                     /gene="pilG"
                     /locus_tag="WHR07_000082"
     CDS             27415..28647
                     /gene="pilG"
                     /locus_tag="WHR07_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4 pilus assembly protein PilG"
                     /protein_id="HEZ2129360.1"
                     /translation="MAKNGGLSLFSKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARK
                     KLAKRGIRPLQITRVKTSSKRKITQEDITVFTRQLSTMIKAGLPLMQAFEIVARGHGN
                     PSMTEMLMEIRGEVEQGSSLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAIY
                     KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPALTQTV
                     MDMSDFFVSYGWMVLIALGFAIYGFLKLKARSIKIQRRMDAILLRMPIFGDIVRKGTI
                     ARWGRTTATLIAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRVIQGLSMTSGMRATE
                     LFPNMMLQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIG
                     TLLVAMYLPLFNLGNVVA"
     gene            28721..29581
                     /locus_tag="WHR07_000083"
     CDS             28721..29581
                     /locus_tag="WHR07_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEZ2129361.1"
                     /translation="MSDLSVLSPFAVPLAAVFGLLVGSFLNVVIYRVPVMMERGWTVF
                     AKEYLNLPLTEEESRTFNLMKPDSCCPKCRVPIRAWQNIPIVSYLLLRGKCASCQTKI
                     SIRYPLIELLTGVLFGLVAWQYGWSWITLGGLILTAFLISLTFIDADTQYLPDSMTLP
                     LIWLGLIFNLDGGFVPLQSAVLGAVAGYGSIWLLCAVYKLIKGEIGMGNGDFKLIAAL
                     GAWLGISALPVLIFVSSLIGLVAAIVMRVAKGQHFAFGPALTVSGWIIFTANDSVWRA
                     VNWWLTHPVL"
     gene            29583..30215
                     /locus_tag="WHR07_000084"
     CDS             29583..30215
                     /locus_tag="WHR07_000084"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEZ2129362.1"
                     /translation="MTVWVGLTGGIGSGKSAAAQCFADLGVPRIDADAAAHSLTASDG
                     IALPEIRRLFGDTVFDTQGLLRRDILRKEVFASPSRKALLESVMLPLIFSEIKKQQET
                     FTDAAYGIVEIPLLTEKRQFIILIRRVLTISAPVEKRIGRVMARSGLTRGEVAAVISH
                     QASESERLLLADDVLLNDGSLKSLREKTMRLHAFYSGIFASKPTQGKHNG"
     gene            30208..30417
                     /locus_tag="WHR07_000085"
     CDS             30208..30417
                     /locus_tag="WHR07_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HEZ2129363.1"
                     /translation="MAESRQTRLQVKCPTCQTAVVWEPENAFRPFCSQRCKLIDLGGW
                     ADGKYTVSGQTESLPEISEPDMAYR"
     gene            complement(30502..32178)
                     /gene="pilB"
                     /locus_tag="WHR07_000086"
     CDS             complement(30502..32178)
                     /gene="pilB"
                     /locus_tag="WHR07_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV-A pilus assembly ATPase PilB"
                     /protein_id="HEZ2129364.1"
                     /translation="MSVGLLRILVQNQVVTVEQAEHYCNESQAGKEVLPMLFSDGVIS
                     PKSLAALIARVFSYSILDLRHYPRHRVLMGVLTEEQMVEFHCVPVFRRGDKVFFAVSD
                     PTQMPQIQKTVSAAGIEVELVIVEDDQLAGLLDWVGSRSTSLLQELGEGQEEEESHTL
                     YIDNEEAEDGPVPRFIHKTLSDALRSGASDIHFEFYEHNARIRFRVDGQLREVVQPPI
                     AVRGQLASRIKVMSRLDISEKRIPQDGRMQLTFQKGGKPVDFRVSTLPTLFGEKVVMR
                     ILNSDAASLNIDQLGFEPFQKKLLLEAIHRPYGMVLVTGPTGSGKTVSLYTCLNILNT
                     ESVNIATAEDPAEINLPGINQVNVNDKQGLTFAAALKSFLRQDPDIIMVGEIRDLETA
                     DIAIKAAQTGHMVFSTLHTNNAPATLSRMLNMGVAPFNIASSVSLIMAQRLLRRLCSS
                     CKQEVERPSASALKEVGFTDEDLAKDWKLYRAVGCDRCRGQGYKGRAGVYEVMPISEE
                     MQRVIMNNGTEVDILDVAYKEGMVDLRRAGILKVMQGITSLEEVTANTND"
BASE COUNT         7535 a         9095 c         8237 g         7356 t
ORIGIN      
        1 ctctttaagt tgacatattg tgcgatgtcg agggctgtac cgtattttcc catcgtattt
       61 tcccatcgta ttttcccatc gtattttccc atcgtatttt cccgttcttt atatgagcgg
      121 caggcatcct cataaaagaa gggataccga taaggaaaaa taccccagca taaaaaatat
      181 actgattaat caatacaaat ccaacaaaca gttcatcgta ttcttttctg ttggcgtata
      241 aaaatactga tatattcctt cactttcata gggcgacgct ttatgtaccg tcctgtgtgt
      301 tgaaacgtcg gttttcctta ccgcctgccc cgcttttccc tgattgctgc caactgccgt
      361 ccgaacttga accgtcaggt ttcagacggc attttttctg cctgctccca caattgccgt
      421 ttttgtgcgg cggtcagttt tttgacggcg atttcctgcc tgagtgccgt gcctttatcc
      481 atcccgcctg caacgatacg catcgccacc ggtttgaata cgcgggtata tttcgcgcct
      541 ttaccggttg tgtgggcggc aagccgctgt tgcggattcg ggctgatgcc gcaatagaac
      601 gcgctgtttt cacacaatat caggtaaacg ctccagtttg acgcgttcat ctgcctgcat
      661 cctgagtttt ctccccgttc caaggcgcaa ctttcagcag cagcagcata cccggtaggg
      721 cgagtgcgaa acacagttgg aaaaacggta cataaccgag ccattcaatc agataaccgg
      781 caaaggaatt gatgaccgtg cgcgggacgg cggacaggct ggtaaacagc gcaagctgcg
      841 ttgcggtaaa tgcgggattg gtttcacgcg ccatatacga tacgaacgcc gccgtcccca
      901 accccacgcc gaccgcttcc gcgccgataa ctgccgccag catcagcctc tcgcctgtgc
      961 cgaccgtgtc gaaaggtccg aaccctgcca gccatacaaa ccccaaaacg gttacagcct
     1021 gcaccgcgcc gaatagccac aaggctttgt ttacgccgat tttcagcatc cacacgccgc
     1081 ccaagatacc tgccgccact gccggccaca gtcctgcatt tttcgcaatc aaaccgatgt
     1141 ctgtcttgct gaaacccata tccagataaa acggcgttgc caacgcggtt gccatactgt
     1201 cgccgagttt gtaaaggaag ataaacagca gcacgcacac cgccgaagcg atgcccttgc
     1261 gcgtaaaaaa ttctttaaac ggctctacca cggtctgctt caacgtttta ggaacggcag
     1321 gcggcaacac gggttcgcgc gcaagaaaca gcgtcatcag aaggccgggc agcataaata
     1381 atgaagtgat aacaaatact tctgaccacg gcatcctgtc tgccaacacc aaactcaatg
     1441 aaccgggaat cagggcggca acccgatagg cgttcacatg aaccgagttg cccaaaccca
     1501 attcttcgtc cgacaaaatc tcgcgcctga acgcatccaa tacaatgtcc tgactggcgg
     1561 aaaaaaaagc gacaagcacc gacaagccgg caatcagcgg cagatgatta cgggggttta
     1621 aaaaggcata ggccgccaaa gccgccagca accctgcctg cgtcagcagc atccacccgc
     1681 gccgccgtcc caaaacgggc agcctgaccg cgtccatcag cggcgaccac aaaaatttcc
     1741 aagtaaacgg cagaccgatt aacgccatca gcccgatgct cttcaaatcc acctgctcgc
     1801 tgcgcaacca cgccggaatc aggttaatca gaaagtacag cggcagcccc gaggtaaacc
     1861 ccgtaaaaat acaaacaagc atatttcggg aaaagatttg cccgataaaa cctgatttcg
     1921 atacagtcat ggttcaaaca gccaagaaat aaaagcctat tgtagcaaat atcgcccaac
     1981 cgctgaaaaa caccgcccct gctccgccgt tttgccgttc aaatgcaaaa tgccgtctga
     2041 aactgtgttc agacggcatt gcttttctga aaacccgacg tgcttacagg ctgtaataca
     2101 tttcaaattc cagcggatgc ggtgccatgc ggatgcggcg gacatcttcc tctttaaagg
     2161 cgatatagct gtcgatccag tctttgctga acacgccgcc gcgcaggagg aattcgtggt
     2221 cggctttgag ggcggcgagg gcttcttcca aagaggcgca aacggtcggg acgagcgcgt
     2281 cttcttccgg cggcaggtcg tacaggtttt tatcggcagg atcgcccgga tggattttgt
     2341 tttgaatacc gtccaaaccc gccatcaaca gggcggcaaa tgccaaatac gggttggcgg
     2401 tcggatcggg gaaacgcgct tcgatgcggc gcgccttgct gctgttcacg gacggaatgc
     2461 ggatggaagc ggaacggttt ttggcggaat atgccagttt ggtcggtgct tcaaagtgcg
     2521 gcacgaggcg tttgtaggag ttggtggacg gattggtaat tgcgttcagg gctttggcgt
     2581 gtttgatgat gccgccgatg tagtagagcg cggtgtcgct caagccggca tagccgtcgc
     2641 ctgcgaacag gttttgaccg tctttccaaa tggattggtg aacgtgcata ccgctgccgt
     2701 tgtcgcccat aatcggtttg ggcataaagg tggctgtttt gccgaagttg tgggcaacgt
     2761 tttgaatcac atatttcatg tcttgggttt ggtcggcgcg tttgaccaag gtggcgaaac
     2821 gcgtgccgat ttccatttgg ctgccggtac cgacttcact gtggtggact tcgacttcga
     2881 tgccgagtcc ttccaaaatg tttaccatcg cggaacgcaa atcctgaccg cagtcaatcg
     2941 gcgcgacggg cgcgtagccg cctttgacgg cgggacggtg gccggtgttt tgaccgtcca
     3001 tatgcaggcc gcttgcccac gcgccgcttt cggacgtgat ttcgtaacgg gttttgtgca
     3061 tgtcggtttc aaattctacg ccgtcgaaga cgaagaattc gggttcgggg ccgaagtatg
     3121 ccgtgtcgcc gatgccggaa gatttcaaat aggcttcggc gcggcgggcg atggagcgcg
     3181 ggtcgcggtc gtaaccctga ccgtcggcag ggtcgatgac gtcgcaggta atgacgacgg
     3241 taacatcatc ataaaaagga tcgacgaagg ctgtagacgc atcgggacgc aactgcatat
     3301 cggaagcctg aatgcctttc cagccgccga tagacgaacc gtcaaacgcc tgaccgtttt
     3361 cgaaccactc ttcggggtct tccaacacga tgcgcgcagg cacggtaaag tggtgctgct
     3421 tgcctttggt atcggtaaag cgcaaatcga caaagcgggc ttcgctttct tcaatcaatt
     3481 ttacggcgtt tttaatagac atttttcagc tcctggaaaa gggaaatagc aaaatatgcg
     3541 gaacgcggca gattagctca aagccagcat gattctacca cgtccatgcc gtctgaaact
     3601 ggccctgcgt caaattccaa gctgtaaaat atagtttcag acggcaatat tgtcaacaat
     3661 atgcttcggt ttgcccgttc ccaagcagaa tgcccgccct tttatccgaa tgccgacaaa
     3721 acagatgccg tctgaaagca gttcagacgg catctgttgt ttggtttgaa aacggtcagc
     3781 gaggatagcc gttgcagaca aatttgtact gagcctctcc aagcgtaccg ggaataacat
     3841 aattccattc ggcataggat ggtgtataag aagcgataga gtttcccgat ttggaatacc
     3901 acgttgccgt caatatccta aaacgtttac cactgcaatc catttcttcc aacgttttag
     3961 ctgtattaaa aaattttcca ttgccatact tttgcggctt ggcgaacctt gtttcaaacc
     4021 atgcactgtt gtccgtacgg ctgtctgcat caccaaacgt ggcagtatta ctatctacca
     4081 atacccaatc cgccgccacc gccggtgttg ccaaccccaa tgcaaatact gccaagcaca
     4141 acatcttttt catgtccgac cctctcgtcc ttgtcaacaa aataaagtta aattgtaaaa
     4201 aaaaacgact tttttcaaga gaaaaatatt ccgtcatgct atctgacaac cgtttcagac
     4261 ggcatcgttt ccatctgtac gccgccgtta taaaatagcc ttcccgtctt ttggaacacg
     4321 accatgaccg ccctcccccg ttactccgtt tttggcaacc ccgttgcaca cagtaaatcg
     4381 ccgcaaatcc atcagcaatt tgcccttcag gaaggcgttg acattgaata cgaacgcatt
     4441 tgcgccgaca tcggcggttt tgcacaggcg gtttcgacat tttttgaaac aggcggttgc
     4501 ggggcaaacg ttaccgtacc gttcaaacag gaagcgtttc atctggcgga cgagcattcc
     4561 gaacgcgcat tggcggcagg tgcggtcaat acgctgattc cgttgaaaaa cggcaagctg
     4621 cgtggcgaca acaccgacgg tatcggtttg accaacgaca tcacgcaggt caaaaatatt
     4681 gccatcgagg gcaaaaccat tttgcttttg ggcgcaggcg gcgcggtgcg cggcgtgatt
     4741 ccggttttga aagaacaccg ccctgcccgt atcgtcattg ccaaccgtac ccgcgccaaa
     4801 gccgaggaat tggcgcagct tttcggcatt gaagccgtcc cgatggcgga tgtgaacggc
     4861 ggttttgata tcatcatcaa cggcacgtcc ggcggtctaa acggtcagat tcccgatatt
     4921 ccgcccgata tttttcaaaa ctgcgcgctt gcctacgata tggtgtacgg ctgcgcggca
     4981 aaaccgtttt tagattttgc acgacaatcg ggtgcgaaaa aaactgccga cggactgggt
     5041 atgctagtcg gtcaagcggc ggcttcctac gccctctggc gcggatttac gcccgatatc
     5101 cgccccgtta tcgaatacat gaaagccatg taatatgttc cgcatcgtca aatggctgat
     5161 tgccctgccc gtcggcatct ttatcttttt caatgcctat gtgtacggca acatcattac
     5221 ctaccgcgcc gtcgcgcccc atcggactgc ctttatgtcg atgcggatga agcagtttga
     5281 acaggaaggt cgcgatgtcg cactggatta ccgctgggtg ccctacaacc gcatctcggt
     5341 caacctgaaa aaagccctga ttgcttccga agatgcccat tttgccgggc acggcggctt
     5401 cgattggggc ggcattcaaa acgccatcag gcgcaaccgg aacagcggca aagtgaaggc
     5461 gggcggctcg accatcagcc agcagcttgc caaaaacctg tttttaaacg aaagccgcag
     5521 ctatatccgc aaaggcgaag aagcggcgat taccgcgatg atggaagccg ttaccgacaa
     5581 agacaggatt tttgaactgt atttaaactc aatcgaatgg cactacggcg ttttcggcgc
     5641 ggaagccgcg tcccggtatt tttatcaaat acccgccgcc aagctgacca aacagcaggc
     5701 ggcgaaactg actgcccgcg tccccgcccc gctctactac gccgaccatc cgaaaagcaa
     5761 acggctccgc aacaaaacca atatcgtgct cagacgcatg ggttcggcag agttgcctga
     5821 aagcgacacg gactgagtgc cgccgcaata taaaatgccg tctgaaatat cattcagacg
     5881 gcatatgctt tctgccttta cccttttctc taaaacgcaa cggggcggtc attatcgctt
     5941 ttgtccttct acataacggt cagacacaaa acgtgtccga cacggacaac ttcccaaaaa
     6001 cggcaggcaa aaaaaataac cgcttataag cggttttttg gtggccagag gcggaatcga
     6061 accgccgaca cacggatttt caatccgttg ctctaccaac tgagctatct ggcctttgtc
     6121 tgtctcgtta agagatgcgt attaaaccaa attacgggac gacatgcaag catatcgggc
     6181 aatattcttt gaaaacaggt ttaagtcaat gttttaaatt tgaattaatt tatgtaaaaa
     6241 caacataaat ccgtattttt gccgcctgcc cgacgatatt aggtcgcccg tctgaaaaat
     6301 attttcaata tttgaagttc ttacccagat aaacagaacg aacctgttcg tttccgacca
     6361 aatcatcagg ttttcccgat gccaacaccg tgccgtctga aataatgtag gcccgatcgc
     6421 agatgctgag ggtttcgcgt acgttgtggt cggtaattaa tacgccgata ccgcgcgact
     6481 tgagaaatcc gatgattttt tggatgtcga tgacggcgat gggatcgacg ccggcaaaag
     6541 gctcgtccaa caaaataaaa tgcggtttca tggcaagtac gcgggcgatt tcgacgcgtc
     6601 ggcgttcgcc gcccgacaaa gatggggcag gattattgcg caaacgctcg atattcaggt
     6661 cggcaagcag tttttcaact tcgccgtcga tgcggctttt gtctttggta ctgatttcta
     6721 aaatggcgcg gatgttttgt tcgacggtca ttttacggaa aatagaggct tcctgcggta
     6781 ggtagccgac acccaggcgg gcgcgttcgt gtatgggcag gtgacgcaat tcctgcccgt
     6841 ccagcatcac gctgcccgca tcggcggcaa tgagtccaac aatcatgtag aagctggtgg
     6901 ttttacccgc accgttgggc ccgagcaggc cgacgacttc cccgctttcg atttcaaggg
     6961 agaagctttt aacgacttgg cgttttttga aacttttttg caggttttga acaacaaggc
     7021 ggctgacgtt tgcgctcata aatatctctt caatatcttc ggtcggcaaa tgccgtccga
     7081 accaggttta tgtttcagac ggcattttgg gattattcgg atttttgcgt actcgaaggc
     7141 tggataacga cgctgaccct gccggatttg gaagcggatt ttgcgccgga ttttgtgctg
     7201 ccgctgatgg tatagacttc ggttttggtg ttgtatgtaa tcaccgcacc ttcggcgaca
     7261 tcgccgccgc gctgtacttt ggcattaccg gttaagacta cggtgctgcc tgcagatgaa
     7321 taagcaacgt tgtttgcctg tccgcgcacc gtgcctttgc cgccgtccaa tgtctggctg
     7381 aagcggactg gcgaaccttc cgccctcacg gattcgccgc ctttgccgcc gcgtgtaaca
     7441 ttgacgcggg cggcggaaat attgagcgta ccctgtctga tgacgacgtt tccgctgaat
     7501 gtggtgcttt ggttggcttg atcgagcgaa ccttggtcgg cctcaatctg aataggctgc
     7561 ctgctgtcgc tttgaagggc aaaagcgggg gacgccgaaa aaaatgctat taaaacaaat
     7621 agcttacata tcttttgtat cataaatcgt ggctttcact ttagatgaga agttcaacat
     7681 gcctgttttg tggtcgtaag tcatgccgcc cgcctgaccg tgcgatgcac catattggaa
     7741 actgacaggc gtatcggttt gggcatattg agattcggta tcgacgtgca gcttttcggc
     7801 ttcaacttta cccgcctgcc gtttgccgtc agcggttttg gtcagcacaa cgttgttttt
     7861 aaaaagaacc tgtttgtttt cggtatggta aacggcttca tcgctgccga cttcgtacaa
     7921 caacctgcct tcttggaaga acacgagatg cggcgaatca aaatggatgt cgctgctttc
     7981 gggaaactgt ttcgcgcctt tcgcgctcaa atgttctttt aagtatccct gttcgtcaaa
     8041 ccgcctgcca tccaagccgt ccattgtgta ttgcggttcg tcgggattga gcctgacttc
     8101 ttcaatctcg acttcgctga tgcgtcccaa ccatgccgac agaccgccca aggcaaccgc
     8161 caatatcaat gggaacgcaa ttccgtaccg ccatcttatt ttcatttgat gtactcgttc
     8221 aaagccgcgc ccaaagtccc ttgcgcctgc ataatcaggt cgcacacttc gcgcaccgcg
     8281 cccgcaccgc cggggcgttt ggcaatatag gcggcgtgtt gcagcgtaaa ccaatgcgcg
     8341 tcgggaacgg caaccggcaa tccgcaacgc accatcaccg gcaaatcgac cacgtcgtcg
     8401 ccgacaaagg cacactcggc ttcttccacg ccgacctgag cgcgcagctc ttcatacgcg
     8461 gcgcgtttgt ccgaaatgcc tttgaagtag taatttatgc ccaactgttt gacgcggatg
     8521 ccgacggagg gcgcgtcccg acctgtgata atcgcagtct gcacgccgct tgcctgaagc
     8581 attttcagac cgtgtccgtc cagtgtgtga aacgatttga tttcttcgcc gttatcgcgg
     8641 ataaagatgc gcccgtcggt caaaacgccg tccacatcca ggatcaacag tttgattttg
     8701 gcggcgcgcg cctgtaattc gggagaaatt gcctgcatgg gatttccttg ttttcagacg
     8761 gcatatctta ccacaaatgc cgtctgaaac ggctgcaacg ccttatacaa tccgtgccgc
     8821 cagcaggtcg tgcatattca gcgcgccgat cagcacgcca tctgcatcgg taaccagaag
     8881 cccgttcaca tggtttgcct gcatgacttt cagggcttcg gtggcgagac gttcggcgga
     8941 gatggtttta ggatgcgtat gcatgacttc gtctatcgaa agaccggtaa aattgtcgca
     9001 ttcttgaaac aggcggcgca aatcgccgtc ggtgaatacg cctttcagac ggccttgccc
     9061 gtccgttacc gccaacatgc ccagcccttt ttcactcatg ctgacgatgg cttctttcaa
     9121 gggcgtgccg agtcggacgg caggcaggcc gccgcctttg tgcataatgt cggcaacgcg
     9181 caaaagtagg cgtttgccga ggctgccggc aggatggctc aaggcgaaat cgtcgggcgt
     9241 gaacgcgcgt gcgcgcagca ggacgaccgc caacgcatcg cccaaagcca tgacggcggt
     9301 ggtgctggtg gtcggggcaa gccccagcgg gcaggcttct ttggaaaccg acgccgtgat
     9361 gtggatgtcg gcatggcgcg ccatggttga atcggggcgg gcggtgatgc agacaagcgt
     9421 gatgtctttg cgtttgagcg cggggatgat ggcggcgatt tcgtcgcttt cgccggaatt
     9481 ggaaatcgcg acgaccacgt cgttgtccac aatcatgccc aaatcgccgt gtgccgcttc
     9541 cgcagggtgg acaaaaaacg cgggcgtgcc ggtcgaggcc atcgttgccg ccattttgcg
     9601 cccgatatgt cccgacttgc ccatgcccgt gataacgacc ctgcccttgc agtgcaacaa
     9661 cgcgtctgcc gcaaggacga agttttcgtc caattccgtt gcaatttcgc gcaagccttc
     9721 ctcttcggtg tgcaacactt cgcgcgccca gtcgagatat tttccgtttt ctgccattgc
     9781 catccgcctt tgctgtaata aaactaccca aaatttccga atcggggtag cataagcctt
     9841 tgaaacatac acatccatcc aaaggaatca gaaatgacta ttttatcgga cgttaaagca
     9901 ttaggacaac aaatctggct ggacaacctt tcccgctcgc tcgtgcaaag cggcgaattg
     9961 gcgcaaatgt tgaaacaagg cgtgtgcggc gtaacttcca atcccgccat tttccaaaaa
    10021 gccttcgccg gcgatgccct gtacgccgat gaagtcgccg cgctcaaaca gcaagatctg
    10081 accccgaaac aacgctacga aaccatggcg gttgccgatg tgcaagccgc ctgtgacgtg
    10141 tgccttgccg aacacgaatc caccggcggc aaaaccggtt tcgtcagcct cgaagtttcg
    10201 cccgaattgt ccaaagacgc gcaaggcacg gtagaagaag cgcgccgcct ctacgccgcc
    10261 atcgggtgca aaaacgcgat gattaaagtg cctgccaccg acgcaggcat cgatgcgctc
    10321 gaaaccctcg tttcagacgg catcagcgta aacctgaccc tgctgttctc acgcgtccaa
    10381 accctcaaag cctacgccgc ctacgcgcgc ggcattgcca aacgcttggc agccggacaa
    10441 agcgttgccc atatccacgt cgtcgccagc ttcttcatct cccgtgtgga cggcgcgctg
    10501 gacacaacac tgcccgacca cctcaaaggc aaaatcgcca tcgcccttgc caaagccgcc
    10561 taccaagact gggcacaata cttcggcagc ccggaatttg ccgcactgga aacccaaggc
    10621 gcaaaccgcg tgcagctttt atgggcatct accggcgtga aaaacccggc ctatcccgac
    10681 acactctacg ttgacagcct gatcggcgcg cacaccgtca acaccgttcc cgatgccacg
    10741 ctcaaagcct tcatcgacca cggcacagcc aaagctacgc tgaccgaagg cgcggacgaa
    10801 gcacaagctc agctcgccga aaccgccgcg ctcggcatcg atgtcgaaac cttggcggca
    10861 cgtttgcagg aagacggttt gaaacagttt gaagaagcgt ttgaaaaact gctcgcaccg
    10921 ttggtttaaa cttttcatcc ccgatgccgt ctgaaaggct ttcagacggc atcgcccgtt
    10981 tgaccggaca cagtgcggca tatcaaggat tcaccctaaa aatattaatg ggcaagaagt
    11041 taatgcacga cattacccac caacacaaaa ggaaatagaa tcatggcaaa agcactcgaa
    11101 atcatttcac ccaatgaaat ttattcagat ctgattttta aggatccggt acctccccat
    11161 acaatatata cagaattgat gaaactggtt agtagaaatg caagtaatga gagaatcgca
    11221 gatagagcct tcgatttttt ctcgtccggc cttatggatg gttcagctac cgaagagcaa
    11281 tataatgccc tatatgattt aaccttactt gaagaacccg ggatggaact gaataaagat
    11341 gagataatgg ctttgattaa tagtcttaaa taaaggggcc gtaccggata tgtacacagg
    11401 acgtttcgcc cccagcccga ccgggctgct ccacatcggc tcgctgctga ccgccgccgc
    11461 ttcctatgcc gatgcacgct caaacggcgg caaatggctg gtccgcatgg aagacctcga
    11521 tccgccgcgc gaaatgccgg gggcggcaag ccatatcctg cacacgcttg aggcattcgg
    11581 attcgagtgg gacggagaag tcgcctatca gagccgccgt tacgccctgt atgaagaaac
    11641 actatgccgt ctgcaaaccg ccggactggt ctatccctgc cattgcagcc gcaaagactg
    11701 gcaggctgcg gcagtccacg gcgcagacgg attcgtctat aacggacgtt gccgcaatcc
    11761 gcagcaacgc cctgcactgc aaggcaaaca gcctgcgtgg cgcatccgcg tccccgaccg
    11821 cgacatcggc ttttcagacg gcatcgtcgg cggttacgcc caaaacctcg cccgcgacat
    11881 cggcgatttc gtcctgcttc gtgcagacgg ttactgggca taccagctcg ccgtcgttgc
    11941 cgacgatgcc gaacagggcg ttacccacat cgtccgcgga caagacctgc tcgtttccac
    12001 gccgcgccaa atctatttgc agcagtgttt gggcgttccg acaccgcaat atgcccacct
    12061 gccgctgctg accaacgcac aagggcagaa gtggtcgaaa cagacgctcg cccccgcatt
    12121 ggatttaaac cgccgcgaac aactcctccg ccaagtgttc cgttacctca agctgcccga
    12181 agcaccggaa accgaccgcc ctgccgaact gctcgactgg gcggtggcac actgggatat
    12241 gggcaaagtg ccgaaacacg ccattaccac cccctaaaca ccgcccgaca aacgcacaaa
    12301 tgccgtctga agccttcaga cggcatttca cacatacagc cccgccctat tcgcgcgtat
    12361 ttgcccgctc aacctctttc cacgcttcga gaatcaggct gccgtcgttg tctttcaaga
    12421 gcgttgcgtc ggaaagcata cgccgccaag tccgcgcacc tttcaaaccg tgcatcagcc
    12481 cgaggctgtg gcggacgatg tggcgcaaga ttgtgccgcg tccggcttgg atctgggctt
    12541 ggctgtatgt gtagaggcac tgcaccaaat cggcgtattc gatcgggctg cgagtatcgc
    12601 cgtaaaacaa tctgtcccat tcgcgcatca ccatcgggtt gtggtacgcc tcgcgcccga
    12661 ccatcacgcc gtcaacgtgt tgcaggtgtc cggcgattgc ttcgttggtg gtgatgccgc
    12721 cgttgatgat gatttccagc ccgggaaact cctgcttgag gcggtaaacg taatcgtatt
    12781 tcaacggggg aacgtcgcgg ttttctttgg gggaaagacc gtccagccaa gcgttgcggg
    12841 cgtggacgat gaaggttttg caggcggttt tgtcgcgcag cgtgccgacg aaatcggcaa
    12901 cggtttggta ttcggtctgc ctgtccacac cgatacggtg tttgacggta acgggaatac
    12961 cgaccgcgtc ctgcatggcg ttgaggcagt cggcaaccag cccgacttcg ttcatcagac
    13021 acgcgccgaa cgagcctttc tgcacgcgcg gactggggca gccgcagttg aggttgacct
    13081 cgttgtaacc gtatgcctcg gcggctttgg cggctttcgc caaatcggac ggatcgctgc
    13141 cgcccagttg cagggcgacg ggctgctcgc cttcgttgaa catcaaaaag cggtctttgt
    13201 cgccgtaaac aatcgcgccg gcgttgacca tttcgctgta cagccaagta ttgcgggtaa
    13261 tctggcgcgc catataacgg tagtgcctgt ccgtccagtc caacatcggg gcgacggaca
    13321 ggtggcgcgg gggaagggtg tgtgtattgt cgttcattgt cgatatttta tcattgcgga
    13381 ttcaatttca atccggaaca accttcattt ttggggaaat ccgcgtcatg aaagagtcca
    13441 gcagtatggt taccggcccg tcgttgcaga gcgacacctg catatgcgtg cggaaacgcc
    13501 ctgtttcgac atgaatcccg tgtccgcgca acagttccgc cgttcgcagg taaagctgct
    13561 gcgcctgttc tgcaggtgcg gcttgggaaa acgaaggccg ccgcccgctt gccgcatcgg
    13621 cataaagtgt aaactgcgac accagcagca ccgcgccgcc gacatctttc aaagacaggt
    13681 tcaacttgcc cgcttcgtct tcaaacacgc gcaaatgggc gattttgtcg gcgatatagt
    13741 gcgcatcttt ttctgtgtcg ctatgcgtta cgccgagcag cacgacgaat ccgccgtcga
    13801 ttttgccaca ggtttccgtg ccgttttcgg acacgacatc cacctttgca cctaccgttt
    13861 tctgtatgac cgcacgcata agccgtcctc cttacctgaa cgtgcaatgc cgtctgaaaa
    13921 ggcttcagac ggcatcggta ttggaaatgc cattacggtt tgacaccgtt ttcttccaaa
    13981 atggcatcga ttttcaagcg ggctttttcc tgtctcaaac cttgttccaa ctggtttctg
    14041 accaactcga aaggctgcgc gtcggggttt ttcccgacct cgctgagttt gaacagataa
    14101 tagcgttcgc ccaatttgac cggatcgcgg gtaacgtcgc cccgattcat cgctgcaaac
    14161 tgcgaagcca gcggctcggg aagctgctgc gccataatga aaccgtcaaa agcctgctcg
    14221 tcgttcggat aacgcttcat cagcccttca aaagacagcc ctttgagcag gagctgctgc
    14281 gcctgacgcg cctcctcttc ggttgcgaag ctgacctgct gcaatttgat catgcggatt
    14341 tgccgctcat aaaattgacg cagtgcgctt tcggaaaccg tttccgaacg ttccagaaaa
    14401 cggacgtact cctcggcata aaaagacgct tcggcgattt taaagcggtt ttggacatcc
    14461 ttatccttat ccaaaccttc cttcaatgcc ctgtttttca aaacttccaa agtttgcagc
    14521 cgacggacgg catcgtttcg gattgcctgc ccgtccggtt tttgggactg ctccgcatgc
    14581 cggtctgcct gctgcatgat ctgcgccacc agcgtatcca ccaaagccgg gtcgatttcg
    14641 ggtgctttgg ctgccgcaaa acctgccaac attgcagcaa taactgcggc agcggttttt
    14701 ttctgtttca tggtattccc tgtcctgcgc ggcggcaaaa cgcctgtctg aacgtcttgc
    14761 cgccgtatcc cgttttcaga attattttgc aggtttgatg tttgccttgc ccaacagtgc
    14821 accgacggca cggtcaatcc gttccgcctg aaggttgccg gcaatctgtc ctttcatttc
    14881 atcaaaagaa ggcactttca cctcgcggct gtcgttgaca taataaacgc cgtagaaatc
    14941 gccgtttttc agcggcgttg ccgtaaattc gccttttttc aagtccttaa ttgcctgata
    15001 aagcggcgga acaccctgtt ccaaatcttt cagcggcaca tatccgaccg gcgcgccggt
    15061 ctgtttggta cggtcgttga gggaatattg tttcaagacg gcatcgaaac cttttttcgc
    15121 cctcaagtcg gcaaccgctt tttttgcatt ttcttccttg tcggtcagga tttcgcccaa
    15181 ctggacttcc tgcgtacctt tgtaaaaacc gctgatattg tcatatgcgg cttttacttc
    15241 ctgctcggaa accggttggg ttttggcgat atgcagcgcg tatgcctcgc cgttcaagcc
    15301 atattttacc gcctgccaaa cggttttgaa ggacggtttc ttgtcgtcgc ccgacttttt
    15361 cgcttcggca cgcaatttgg caagcgcatt tttaaactct gccgaccggt cgagtttcag
    15421 gcgtttcact tcctgtgcga ccacggtgtt gaccacttcg ttttccagca gggattggcg
    15481 cagttgcggc gtgtcttcgg cacggctgtt ttccgcacgg aatgcggcaa cctgcgcatc
    15541 gatgacggaa ctgtcgattt tctgaccgtt gacggttgcc agcgtttggg caaacaggct
    15601 gccggaacag gcaagcagtg caacggaagt caggattttt gctttcataa tcttctctct
    15661 ttaaatttta aattgaaatg ttcgggcaga cttcattcag tccgccgtat ggaaatactc
    15721 gtcaggggta gccgcccgga tgccgagcgc gtgaatcatg ccgcctgaaa acaaatcttt
    15781 gagcagcgat ttgaccgttt tctggcggtt caggcggctt acgccttcaa aacggccgct
    15841 aacgaccaaa acggcataat gtccgccgcc ggtattgccc gcgtgtcctt tgtgcagatg
    15901 gctctcatcg ccgatttcca acaccagcgg atcgagcgtc tgcaggcgtt cgcggatcaa
    15961 atcgacggcc ggcattattt gaacaccgct ttaaacggct tgatcagcac ttcgctgtac
    16021 acgcctgcat gaacataggg atcgtcttcc gcccacgcct ctgccgcatc caaagactcg
    16081 aactgcgcca caatcaaact gcccgaaacg cggttggagt cctccggcaa aggattcggg
    16141 cctgccgtca acagccggcc ttccgacttc agcgtctcca gccgtttgag gtgttcggga
    16201 cgtgccgcca tacgcgcttc atacacattc tccccgtctg ttgccagcaa cataaaatat
    16261 tccacagtca atcctccttt ttcagacagg tactcagata aataccctga ataataaaga
    16321 aaacaagcat cagtgcagtc gagccgaaca ttttatagtt gacccattgc gactcgaacc
    16381 gggtaaacac aaaccagttg gcgataccca taaaaatcag gaaaccgacc cacatatacg
    16441 tcaatttcgc ccatacggca tccggaagct gaatctccct gccgatactc gccttcaagc
    16501 cgtttttacc ggcgaggtgg ctgccccaca ggaacagcgc gcccagccaa aacaaaacgc
    16561 tcggcttcca cataatgaag cggctgtcgc ccaaaacaat ggttgcgcca ccgaatatca
    16621 caatcagcac cagtccgacc cactgcatcg tatccagctt tttatatttc caatacagaa
    16681 aagccgcctg aaccacaccg gcaaccaagg cgaccgccgt tgcggcaatc atgtttttgg
    16741 taacggtata ggtggcgaaa aacaggatga cggacaaaag gtcgctgacg aatttcatat
    16801 ccaaatgaga aagcaaatca aataaacgct aatcatacag gcagaaccct gtttttgcac
    16861 ctgcaaaacc aacaaatttt gttttgattg atgcaaatat gcacagatgt ttttgaaaaa
    16921 agatggagat atgtcataat ttgtaaaaac ggcgaatgat tgccgtttaa aatgtggcgg
    16981 cggtcggtac attcacatat taaatgcccg ccggccgact gccccgccga tgcccgatga
    17041 tgacgaaatt tacagactgt acgcggtcaa accgtattca gccgccaacc cacaggggat
    17101 acatcttgaa aaacaacaga caaatcaaac tgattgccgc ctccgtcgca gttgccgcat
    17161 cctttcaggc acatgctgga ctgggcggac tgaatatcca gtccaacctt gacgaaccct
    17221 tttccggcag cattaccgta accggcgaag aagccaaagc cctgctaggc ggcggcagcg
    17281 ttaccgtttc cgaaaaaggc ctgaccgcca aagtccacaa gttgggcgac aaagccgtca
    17341 ttgccgtttc ttccgaacag gcagtccgcg atcccgtcct ggtgttccgc atcggcgcag
    17401 gcgcacaggt acgcgaatac accgccatcc tcgatcctgt cggctactcg cccaaaacca
    17461 aatctgcact ttcagacggc aagacacacc gcaaaaccgc tccgacagca gagtcccaag
    17521 aaaatcaaaa cgccaaagcc ctccgcaaaa ccgataaaaa agacagcgcg aacgcagccg
    17581 tcaaaccggc atacaacggc aaaacccata ccgtccgcaa aggcgaaacg gtcaaacaga
    17641 ttgccgctgc catccgcccg aaacacctga cgctcgaaca ggttgccgat gcgctgctga
    17701 aggcaaaccc aaatgtttcc gcacacggca gactgcgtgc gggcagcgtg cttcacattc
    17761 cgaatctgaa caggatcaaa gcggaacaac ccaaaccgca aacggcgaaa cccaaagccg
    17821 aaaccgcatc catgccgtcc gaaccgtcca aacaggcaac ggtagagaaa ccggttgaaa
    17881 aacctgaagc aaaagttgcc gcgcccgaag caaaagcgga aaaaccggcc gttcgacccg
    17941 aacctgtacc cgctgcaaat actgccgcat cggaaaccgc tgccgaatcc gccccccaag
    18001 aagccgccgc ttctgccatc gacacgccga ccgacgaaac cggtaacgcc gtttccgaac
    18061 ctgtcgaaca ggtttctgcc gaagaagaaa ccgaaagcgg actgtttgac ggtctgttcg
    18121 gcggttcgta caccttgctg cttgccggcg gaggcgcggc attgatcgcc ctgctgctgc
    18181 ttttgcgcct tgcccaatcc aaacgcgcgc gccgtaccga agaatccgtc cctgaggaag
    18241 agcctgacct tgacgacgcg gcagacgacg gcatagaaat cacctttgcc gaagtcgaaa
    18301 ctccggcaac gcccgaaccc gctccgaaaa acgatgtaaa cgacacactt gccttagatg
    18361 gggaatctga agaagagtta tcggcaaaac aaacgttcga tgtcgaaacc gatacgcctt
    18421 ccaaccgcat cgacttggat ttcgacagcc tggcagccgc gcaaaacggc attttatccg
    18481 gcgcacttac gcaggatgaa gaaacccaaa aacgcgcgga tgccgattgg aacgccatcg
    18541 aatccacaga cagcgtgtac gagcccgaga ccttcaaccc gtacaaccct gtcgaaatcg
    18601 tcatcgacac gcccgaaccg gaatctgtcg cccaaactgc cgaaaacaaa ccggaaaccg
    18661 tcgataccga tttctccgac aacctgccct caaacaacca tatcggcaca gaagaaacag
    18721 cttccgcaaa acctgcctca ccctccggac tggcaggctt cctgaaggct tcctcgcccg
    18781 aaaccatctt ggaaaaaaca gttgccgaag tccaaacacc ggaagagttg cacgatttcc
    18841 tgaaagtgta cgaaaccgat gccgtcgcgg aaactgcgcc tgaaacgccc gatttcaacg
    18901 ccgccgcaga cgatttgtcc gcattgcttc aacctgccga agcaccgtcc gttgaggaaa
    18961 atgtaacgga aaccgttgcc gaaacacccg atttcaacgc caccgcagac gatttgtccg
    19021 cattacttca accttctgaa gtacctgccg ttgaggaaaa tgcagcggaa atcgttgccg
    19081 atgatttgtc cgcactgttg caacctgctg aagcaccggc cgttgaggaa aatgtaacga
    19141 aaaccgttgc cgaaatacct gatttcaacg ccaccgcaga cgatttgtcc gcattacttc
    19201 aaccttctga agtacctgcc gttgaggaaa atgcagcgga aaccgttgcc gatgatttgt
    19261 ccgcactgtt gcaacctgct gaagcaccgg ccgttgagga aaatgcagcg gaaatcactt
    19321 tggaaacgcc tgattccaac acctctgaag cagacgcttt gcccgacttc ctgaaagacg
    19381 gcgaggagga aacggtagat tggagcatct acctctcgga agaaaatatc ccaaataatg
    19441 cagataccag tttcccttcg gaatctgtag gttctgacgc gccttccgaa gcgaaatacg
    19501 accttgccga aatgtatctc gaaatcggcg accgcgatgc cgctgccgag acagtgcaga
    19561 aattgctgga agaagcggaa ggcgacgtac tcaaacgtgc ccaagcattg gcgcaggaat
    19621 tgggtatttg attcccaact gccctttcgc agatcaagga tgccgtttca gacggcatct
    19681 ttttttgcct tatcggtgta acggataaag tttgaaccgg cacaggctca aacagcaggc
    19741 cgacggcaac aaaatgccgt ctgaaccccc taaaggcttc agacggcatt ggcggcggcg
    19801 gtatcaggca gtttgatagg caaccgaatc gtcgccgctt ttcttttgaa tgaactcgat
    19861 tttgtatccg tcggggtctt cgacgaaggc tatcacggtt gtgccgtgtt tcatcgggcc
    19921 ggcttcgcgg acgacgtttc cgccctgccg cttcacacgt tcgcaggctt cgtaggcatc
    19981 gtccacttca accgcgatgt gtccgtaggc gttgcccaag tcgtatcgtt ccgtatccca
    20041 gttgtgcgtc agttccaaaa ccgtgctgtc ggtttcatcg ccgtaaccga cgaaggcaag
    20101 ggtaaatctg ccttcgggat aatcttttcg gcggagcagt ttcataccca aaacgttttg
    20161 gtagaaatcg agggattttt cgagattgcc cacgcggagc atagtatgga gtaagcgcat
    20221 tttttgtgtt cctttcggtg gtggttaaac ttcgatttta ttcggggtaa acgtctgcca
    20281 tttgttgcag gcggggcagt gccagaaaaa gacttgggat ttgaagtggc agttgcggca
    20341 acggtacatc acgctgcgct gtagctgccg tccgataacc gaacgcatca tgtcggcatc
    20401 ggctttccaa gccggattca tatcgctgag tttcaaaccg agcaggcggt acacgccgtt
    20461 aaggtcgggc ttgcggcgga caagctcgac ggcggtttgc gcggcttctt tctcgcactt
    20521 aagcagcagg gatttctcgt acacgacatt gatcaggtca agttcgggaa acgtctgcat
    20581 atatcctgtc agacggttca agccttcttc aggttttccc tgcgcggcat aggcttcgta
    20641 aagcttctcg ccgaccatgc tcaagtatgc atggttttgc tgctcgatgg cggcataggc
    20701 ttcgacggcg gcagggaaat tgccttgtcg gtgttcgatg tcgcccaaaa tcatgttggc
    20761 gcgggtgcat tttttgttgg cttcgagtgc cttgccgaca ttgaaacgcg cgacatcgaa
    20821 attggacttg aacagcgcgg cttgggcaag ttcgcaataa aactgggcga tttcaaactg
    20881 ataggtctga tcgtcatggc tgagcagccg ggcggtttca accgcttttt cccaatccct
    20941 gtcctgttgg tagatattga gcaggtgctg tctggcttca cgcgccattt taccgtcttg
    21001 cagccccaaa aaaatctgtt cggcacgatc gaccaacccc gcactttggt agttttgcgc
    21061 caattcaaac aggacgcgcg cacgcttttc gccgaccgta tcgggagaat cgagcattgt
    21121 ccggtgtatg ttgatggctt tgtcgttttc gccacgctgg cggtaaagtt tgccgagggt
    21181 gaggttcaaa tcatacgatt gcggccggcc gtcgacgact tccgccaact cccttgccgc
    21241 gcgcccgctg ttgcggtcga ccaaagcgtc caagctttta taaaatcccg aagggatgct
    21301 ttttgcctgc ttcaatacgg ttttcatatc cacgcgggcg gcaaaccagc ccatcgcgaa
    21361 gaagacgggc aaaaggataa tcggcagcag gataatccac aattcgttgt ccatatcggc
    21421 tttcttaagg ctgtttggta gattcgggcg cattttgcgc cggtggtgcg gtcagctcct
    21481 tccccgtcaa acgcgcattt ttctttactt cggcacgcaa cctgccgttc tcgccacgta
    21541 acgacaacaa ccgtccgaac aaggcaaaca ttccaaaaat aataccgact acaaatgcgc
    21601 cgaacaatac gacaatcagc ggcaaatcga atttttgccc cggcaggtag gagaaggtaa
    21661 cggcatccgt attaatgacg gcaagcagca ggaagaacag caggataatg attttgacga
    21721 cggtatagat aagtttcatg tttgctccgt aaataaaaac gccgcccgga cagcttcgca
    21781 ctctgaacca agattgcgct agtttaaacg atttgcacgg tttcggatag gatgcggcag
    21841 cgtgttcgga cgacatacgg agtatgcgat tgccgacaat tttaccaaat acaccgttcc
    21901 tttccatttg aaaaataacg gattggacac cgcatcgaca gaaaaacccg ccgcgcactt
    21961 gtcaaaaccc tgtttgcagg cgtatcttta caatcttcaa attcaaaccg ttcattgaaa
    22021 catatcagaa taagaaaggc tttacatcat gagcagaccc gtacccgccg tattcggcag
    22081 cgtttttcac agtcaaatgc ccgtcctcgc ctaccgcgaa ggcaaatggc agccgaccga
    22141 atggcaatct tcccaagacc tctccctcgc accgggcgcg cacgccctgc actacggcag
    22201 cgaatgtttc gagggactga aagccttccg tcaggcagac ggtaaaatcg tactgttccg
    22261 tccgactgcc aatatcgcgc gtatgcggca aagtgcggac attttgcacc tgccccgccc
    22321 cgaaacccaa gcctatctcg atgctttggt cgaactggtc aaacgtgccg ccgacgaaat
    22381 tcccgatgcg cctgccgccc tgtacctgcg cccgacctta atcggtaccg atcccgttat
    22441 cggcaaggcc ggttctcctt ccgaaaccgc cctgctgtat attttggctt cccccgtcgg
    22501 cgactatttc aaagtcggct cgcccgtcaa aattttagtg gaaaccgaac acatccgctg
    22561 cgccccgcat atgggccgcg tcaaatgcgg cggcaactac gcttccgcca tgcactgggt
    22621 gctgaaggcg aaagccgaat acggcgcaaa ccaagtcctc ttctgcccga acggcgacgt
    22681 gcaggaaacc ggcgcgtcca actttatcct gattaacgac gatgaaatca ttaccaaacc
    22741 gctgaccgac gaatttttgc acggcgtaac ccgcgattcc gtactgacgg ttgccaaaga
    22801 tttgggctat accgtcagcg aacgcaattt cacggttgac gaactcaaag ctgcggtgga
    22861 aaacggtgcg gaggcgattc tgaccggtac ggcagccgtc atctcgcccg ttacttcctt
    22921 cgtcatcggc ggcaaagaaa tcgaagtgaa aagccaagaa cgcggctatg ccatccgtaa
    22981 ggcgattacc gacatccagt atggtttggc ggaagacaaa tacggctggc tggttgaagt
    23041 gtgctgatgc tttaaataaa aaatgccgtc tgaaacccgt ttggcgtttc agacggcatt
    23101 ttcgcatccg aaccgtttcc gctgcacctg cagcaagtcg gcacaaaggc aatcggttaa
    23161 aacaagcgtc cgcatttccc atcccgcctg ccgtaagtcg ggcatttccc tagaaatacg
    23221 cttcagacgg caaaacgccg cccgaaaccg atatgcggca cggacggcgc acggatttga
    23281 aaacggcgga ttatccctcg gtgctcaagg cattgatgct gtaaccgccg tcaacgtaag
    23341 tgatttcgcc ggtaatgccg gacgacaggt cggacagcag gaaggcggcg gtattgccga
    23401 cttcttcgat ggtaacgttg cggcgcagcg gattgtgggc ggcgacgtgt cccaagagtt
    23461 tgccgaaatc ggcgatgccg gaggcggcaa gcgttttgat cgggccggcg gaaatgccgt
    23521 tgcagcggat gccttctttg cccaagcagg cggcggtaaa gcggatgcct gcctcaaggc
    23581 tggcttttgc catacccatc acgttgtagt tcggaatcgc gcgtaccgcg cccaagtagc
    23641 tcagggcgac gatggcggag tttctgccgc gcatcatcgg acgggcggct tttgccagcg
    23701 cgggcaggct gtatgcggaa atttcgtgtg cggtgttgaa cgcttcgcgg ctgatgctat
    23761 cgaggaagtc gccgctcaag gcttctttcg gcgcaaaacc gatggaatgc accaaaccgt
    23821 ccaagccgtc ccaatgtttg cccaaatcgg cgaacacttg gttgatttcg tcgtcgctgg
    23881 cgacatcgca gcggaatacg agttcggaat ccaattccgc cgccattttg cggacgcgct
    23941 cttccagttt gtctacaacg taggtaaacg ccaaatccgc gccttgttcg cggcaggctt
    24001 tggcgatgcc gtaagcgatg gaacgctcgg aaatcatgcc ggtaatcaga atttttttgc
    24061 cttgcagaaa gcccattttg tatccttcaa atagtgttcg gttcgttcta aaccgttgat
    24121 tatagcaaat tgtccctgtt tctgtgtttt cacgttgcag cgtgcaaacg gcaatgccgt
    24181 ccgaagcgga tttcagacgg catcggacgt ttcaaatacg gtttaaggca tcagatgccg
    24241 cgcaacaatt cgttcacgct ggttttcgca cgggtttgcg cgtccacgcg tttgacgatg
    24301 acggcgcagt aaaggctgtg gctgccgtct ttggaaggca tactgccgga cacgacgacc
    24361 gaacctgtcg gtacgcggcc ttggtagatt tcgccggtgg tgcggtcgaa gattttggtg
    24421 gattgaccga tgaacacgcc catcgaaatc acgctgcctt cttcgacaat cacgccctca
    24481 acgatttcag aacgcgcacc gatgaagcag ttgtcttcaa tgatggtggg ggcggcctgc
    24541 aggggttcga gtacgccgcc gataccgacg ccgccactca agtgcacgtt tttaccgatt
    24601 tgcgcgcaag agccgacagt cgcccaagta tcaaccatcg cgccttcgtc gacgtatgcg
    24661 ccgatgttga cgtaagacgg catcagcacg acatttttcg ccacaaagct gccgcgtcgg
    24721 gcaaccgcac ccggaacggc gcggaagcct gcgtttttga actcgtcttc agaccagtcg
    24781 gcaaacttgg tcggcacttt gtcgaagtat ttgttcacgc cgtcgttgag gacttcgttg
    24841 tcttggatgc ggaaggacag caacacggct tttttcgccc attcgttgac tttccactca
    24901 cccacgccca agcgttcggc aacgcgcagt ttgccggaat cgagttggcg gatggtttcc
    24961 aacacggctt ctttgacttc gggagtaacg gtggtcgggg taatgtccgc gcggttttca
    25021 aaggcggttt cgatgatgtt ttgcaaagac ataatgtttc cttatgtgag atgtttcgtg
    25081 ggacgtttgc cggtattttc gggcagtatg ttcatttgaa atgaatgcgc tattgtgcca
    25141 cgcaaacgca tattcgtcag caatacgcgg gcggttgccg aacattggcg tttcggaatc
    25201 gggcgggcgg caggtattgc cttttccgca cccgaatcaa tacagaacgg cggcggcact
    25261 tttatgccgc gccgccgcct ttcagacggc attcgcggta aaacgccatc agcccttcgg
    25321 tcgaggcatc gtgtacggac gttccgcctt ccagttcgcc gatgatggtt tttgccaact
    25381 gtttgccgta ttccacaccc cactgatcga aggggttgac gttccatatc gtgccttgga
    25441 cgaaggtttt gtgttcgtaa gccgccatca gcatacccag attgtagggc gtgaggcggt
    25501 cgagcaggat gctgttactg gggcggttgc cggggaactc tttgtgcggc gcgaggcgtt
    25561 cgcgttccgc ttcgggcaaa tctgccaatt cggcgcgtgc ttcgtccaag gttttgcctt
    25621 tcatcagggc ttcagcctgt gcaaaggcgt tggcaacggt aaaacggctg cgtccttcct
    25681 ccacgccctg cgccgtcatc gggacgataa agtcgcaggg aatcaggcgc gtgccttgat
    25741 gaagcagttg gaaataggcg tgctggcagt tgaccccttc accgccgaac acgatgccgc
    25801 ccgttttgca cacggcggga ctgccgtctg aagcgcggct tttgcccaaa ctctccatat
    25861 cgagctggtt cagccacgcc ggcagcaggc gcaggttgtg gctgtacgga acggcggtct
    25921 gcccgtccgc gtgctggaaa ttgttatacc acacggcaat cagtgccatc agaacgggaa
    25981 tgttgcggcg cggcggcgtg tggaaaaaat ggctgtccat cgcgtgcgcc cccgccaaca
    26041 actcgcggaa acgcgccccg ccgaccgcaa ccatcacggg caaaccgacg ggcgaccaga
    26101 cggaatagcg tccgcccacc cagtcgtaca tcgcaaacac gcgttccgcc gcgataccaa
    26161 aagccgcagc tgccgcagtg tcggcagaca ccgcgcaaaa atggcacgcc gtttcagatt
    26221 ccgagaaccc cgcaccgcga taccacgcct tgactgcctg tgcattgagc agggtttctg
    26281 gtgttttgaa ggacttgctg gcaacgcaaa acactgtcgt ttcggggttc agacggcata
    26341 aaaccgcatc caggcaggca ggatcggcgt tggcggcaaa atggacggcg atatgccgtc
    26401 tgaacggctc aagtgcctgc acgcacattg ccggcccgag gtcggatccg cctatgccga
    26461 tgtggacaaa atccgtaatc cgttttccgg ttgtcccctg atacgaaccg tcgtccaaac
    26521 tgtgtgcaaa cttcaacgca cgatttaact cgcggcggat ttcgggcaac acgtccctgc
    26581 cgtccgcata aacggcaccc gcaccgtcgg gcaggcgcaa agccgtatgc agcgcggcac
    26641 gcccctcgct gttgttgacc ttcgcacccg tccgcaaagc acgcattttc ccttccaaat
    26701 ccgccgcatc ggcaagattg cagagcagtt gcagcgtatc ttcgcccaaa cggtttttgc
    26761 tgtaatcgaa caacatcccg tccaaacgct cgtgcatacg ctcaaaacgg tcgggttcgc
    26821 aggcaaagcg gtcgcgcaaa aggacatgac gcgtatcctg ataatggcgt tcgagcgcat
    26881 gccatgcacg ggtaaaagca ttcatctgtt ttccttgatt tttcagaacc ggattaaaat
    26941 gtagcagaat gtagtttaac aaacggcagc ggctttggcg aatctccgga acaccgcccg
    27001 ccgcgtccaa tagcacctta tttccatatg gcgaaaatat agtgaattaa caaaaatcag
    27061 gacaaggcgg cgagccgcag acagtacaaa tagtatggaa ccgattcact tggtgcttca
    27121 gcaccttaga gaatcgttct ctcttgagct aaggcgagcc aacgctgtac cggtttttgt
    27181 taattcacta taccctccga ccggcatttg acccgcaaca atatcctgca agatttattg
    27241 tgtacgcata aatgccggac agccgcctaa ataaggtata atcgcatccg attctgtccc
    27301 gtttgccgcc cgcaggcggg atgtcggcgg ttttcatctt accgggaaca cgccggtact
    27361 gttttttaac gatgtttctt acattttatt ccaattactt tacggggcta gaatatggct
    27421 aaaaacggag gactttcttt attttcaaag aaagaaaaac gctttatctt tgaaggcagg
    27481 cattccgcct ccgacaaact ggtcaacggc gaagtatccg cgtttaccga agaagaggcg
    27541 cgcaaaaaac tggcaaaacg cggcatccgc ccgttgcaga ttacccgtgt gaaaacaagc
    27601 tccaagcgca aaatcacaca agaagacatc accgttttca cccgccagct gtccacgatg
    27661 attaaagcgg gcctgccgct gatgcaggca tttgaaatcg tggcgcgcgg acacggcaac
    27721 ccgtctatga cggaaatgct gatggaaatc cgaggcgaag tggaacaggg cagctcgttg
    27781 agccgcgcat tctcaaatca cccgaaatat ttcgaccgct tctactgcaa cctggttgcg
    27841 gcgggcgaaa cgggcggcgt attggaaagc ctgctggaca aattggcaat ttacaaagaa
    27901 aaaacccagg ccatccgcaa aaaggtaaaa accgcgctga cctatccggt atccgtcatc
    27961 gccgtcgcca tcggtttggt attcgtgatg atgattttcg tactgcccgc ctttaaagaa
    28021 gtttacgcca atatgggcgc ggagcttccc gcactgaccc aaacagtgat ggatatgtcc
    28081 gactttttcg tctcatacgg ctggatggtg ctgatcgcac tgggctttgc catatacggc
    28141 ttccttaaat tgaaggcgcg ttcgattaaa atccaacggc gtatggatgc catactgctg
    28201 cgtatgccga ttttcggaga cattgtccgc aaagggacga ttgcccgctg gggcaggacg
    28261 acggcgacgc tgattgcggc aggcgtgcct ttggtcgatg tattggactc cactgccggc
    28321 gcggcgggca atttaatcta tgaagaagcc acccgggaaa tccgtacgcg cgtcatccaa
    28381 ggtttgtcta tgacttcggg gatgcgtgcg acggaactgt tccccaatat gatgttgcag
    28441 atgtcttcca tcggcgagga atcgggttct ttggacgata tgctcaacaa agccgccgaa
    28501 ttttacgaag acgaggtgga caatgcggtc ggcaggctgt ccgctatgat ggagccgatc
    28561 attatcgtga ttttaggctt ggtcatcggc acgcttctgg tcgccatgta tctgccgctg
    28621 tttaatttgg gcaacgtggt cgcctgattt gccgcacaga tccggcgcgg attcgctctg
    28681 cgccggtttg tttttgtttt gaatacattg agaacaaaat atgtctgatt tgtctgtatt
    28741 gtcgccgttt gccgtgcctt tggcagcggt gttcgggctg ctggtcggca gtttcttaaa
    28801 tgtcgtcatt taccgcgtgc cggtcatgat ggaacgcggc tggacggtat ttgccaaaga
    28861 atatttaaac ctgccgctga ccgaagagga aagccgtacc ttcaacctga tgaaaccgga
    28921 ttcctgctgt cccaaatgcc gcgtgccgat acgcgcgtgg cagaacatcc cgattgtcag
    28981 ctacctgctc ctgcgcggca aatgcgcctc ctgccaaacc aaaatcagca tacgctatcc
    29041 cttaatcgaa ctgctgaccg gcgtattgtt cgggctggtt gcctggcaat acggctggtc
    29101 ttggattaca ttgggcggtt tgatactgac cgcgtttctg atttccctga cctttatcga
    29161 tgcggacacc caatacctgc ccgactcgat gacattaccc ttgatttggc tggggctgat
    29221 atttaatttg gacggcggct tcgtgccttt gcagtctgcc gttttaggtg cggttgccgg
    29281 ctatggttcg atatggcttt tatgcgcggt atataaactg attaaaggcg aaatcggtat
    29341 gggcaacgga gatttcaaac tgattgccgc attgggcgcg tggctcggca tatccgcatt
    29401 gcccgtgctg atttttgttt cctcgctgat cggtttggtc gcggcaatcg ttatgcgcgt
    29461 cgccaagggg cagcattttg ccttcggccc cgcactgaca gtttcgggct ggataatttt
    29521 tacggcaaac gattccgtat ggcgggcggt caactggtgg ctgacccatc cggtgctgta
    29581 agatgacggt atgggtcgga ctgaccggcg gaatcggcag cggcaaatcg gcagccgcgc
    29641 aatgttttgc cgatttgggc gtgccgcgca tcgatgcaga cgcggcggcg cactcgctga
    29701 cggcttcaga cggcatcgcc ctgccggaaa tcaggcggct gttcggcgac accgttttcg
    29761 acacacaggg tttgttgcgg cgcgacatat tgcgtaaaga agtctttgcc tccccatcgc
    29821 gaaaagcctt gctcgaatcc gtgatgttgc cgctgatttt ctcagaaatc aaaaaacagc
    29881 aagaaacctt taccgatgcg gcttacggca ttgtcgaaat tccgctgctg acggaaaagc
    29941 gtcaatttat catcctgata cggcgtgtcc tgaccataag tgcccctgtg gaaaaacgta
    30001 tcggcagggt gatggcccgc agcgggctga cgcgcggcga ggtggctgcc gtcatcagcc
    30061 atcaggcatc cgaatccgaa cgcctgctgc ttgcagacga tgtgctgctc aatgacggca
    30121 gcctcaaaag cctgcgtgag aaaacaatgc gcctgcacgc gttttattca gggattttcg
    30181 cctcaaaacc aacacaagga aaacacaatg gctgaatcgc ggcaaacacg ccttcaagtc
    30241 aaatgtccga cctgtcaaac agcagtagta tgggaacccg aaaacgcatt ccgccccttc
    30301 tgttcgcaac gctgcaaact gatcgacttg ggcggatggg cagacgggaa atatacggtt
    30361 tccggccaaa cggaaagttt gccggaaata tccgaacccg acatggcata ccgctgaccg
    30421 ccccgccttc ccggcaaaca ccctgaaagt caaatgccgt ctgaaacaaa cacgcttcag
    30481 acggcatttt cattctcaaa cctaatcgtt ggtatttgcc gttacctctt ccaatgaagt
    30541 aatgccctgc ataactttca aaataccggc ccggcgcaaa tccaccatac cctccttata
    30601 ggcaacgtcc aaaatatcca cttccgtacc gttgttcata atcacacgct gcatttcttc
    30661 gctgatgggc ataacctcat acacgcccgc acgcccctta taaccctgcc cccggcaacg
    30721 gtcgcaaccg acggcgcggt aaagtttcca atcttttgca aggtcctcat cggtgaagcc
    30781 gacttccttc aaagcagagg cagacgggcg ttccacttcc tgtttgcagc tcgaacacag
    30841 cctgcgtaaa agacgctgcg ccataatcag gctgaccgaa ctggcaatat taaacggcgc
    30901 gacacccata ttcagcatac gcgacaacgt cgccggcgca ttattggtgt gcagggtgga
    30961 aaacaccata tgccctgttt gtgccgcctt aatcgcaata tcggcagttt ccaaatcacg
    31021 aatctcaccg accataatga tgtccgggtc ctgacgcagg aaagacttca aagcagcggc
    31081 aaaagtcaga ccctgcttat cattgacgtt aacctgattg atgcccggca ggttaatctc
    31141 ggcagggtct tccgccgttg caatatttac cgactccgta ttcaaaatat tcaaacaggt
    31201 atagagcgac accgtcttac ccgaacccgt cggaccggtt accagcacca tcccgtaggg
    31261 acggtgaatc gcttccaaca acaatttttt ctgaaacggc tcaaaaccga gctggtcgat
    31321 gttcaaagac gcggcatcgg aattcaaaat ccgcatcacg accttttcgc caaacagcgt
    31381 cggcaatgtg ctgacacgga aatcgacagg cttgccgccc ttttgaaagg tcagctgcat
    31441 cctgccgtcc tgcggtatcc gtttttcgga aatgtccaaa cgcgacatta ccttaatccg
    31501 ggaagcaagc tgccccctta ccgcaatggg cggctgaacc acctcgcgga gctgcccgtc
    31561 cacacggaaa cggatacggg cattgtgttc gtaaaactcg aaatggatgt ccgatgcccc
    31621 gctgcgcaag gcatccgaca aagtcttatg gataaacctc ggaacagggc cgtcttctgc
    31681 ctcctcgttg tcgatataca gggtgtggct ttcctcttcc tcctgcccct ccccaagctc
    31741 ctgaagcagc gatgtcgaac gcgaacccac ccaatcgagc aaacccgcca actggtcatc
    31801 ctcgacaatg accaactcaa cctcaatccc tgcggcagaa acggttttct gaatttgcgg
    31861 catctgtgtc ggatcggaaa ccgcaaaaaa tactttgtcg ccccgacgga aaaccggcac
    31921 acagtggaac tccaccatct gctcctccgt caacaccccc atcagcaccc tgtggcgcgg
    31981 ataatgacgc aaatcaagaa tcgaataact gaacaccctc gcaatcaatg ccgcaagcga
    32041 cttgggcgaa atgacaccgt ctgaaaacag catcggcaac acttccttac ccgcctgcga
    32101 ctcattgcag taatgctcgg cctgctcaac agtaaccacc tggttttgaa ccagaatcct
    32161 cagcaaacct acgctcatac gaccttatcc ccaaatttat tcattgttat acctgtacag
    32221 ctt
//
LOCUS       DAWGKF010000003        30069 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.003, whole genome shotgun sequence.
ACCESSION   DAWGKF010000003 DAWGKF010000000
VERSION     DAWGKF010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 30069)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30069)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30069
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.003"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            91..723
                     /locus_tag="WHR07_000087"
     CDS             91..723
                     /locus_tag="WHR07_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HEZ2129365.1"
                     /translation="MDETNTKADEAVKTANEAKQTAEETKQNVDAKVKAAETAAGTAN
                     TAADKAEAVAAKVTDIKADIATNKDNIAKKANSADVYTREESDSKFVRIDGLNATTEK
                     LDTRLASAEKSITEHGTRLNGLDRTVSDLRKETRQGLAEQAALSGLFQPYNVGRFNVT
                     AAVGGYKSESAVAIGTGFRFTENFAAKAGVAVGTSSGSSAAYHVGVNYEW"
     gene            complement(789..1127)
                     /locus_tag="WHR07_000088"
     CDS             complement(789..1127)
                     /locus_tag="WHR07_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEZ2129366.1"
                     /translation="MKKIEAIVKPFKLDDVREALTEIGITGMTVSEVKGFGRQKGHTE
                     IYRGAEYAVDFLPKVKIELVLADDAVERAIDVIVEVARSGKIGDGKIFVLPVEEAIRI
                     RTGERSDAAV"
     gene            1278..5240
                     /gene="purL"
                     /locus_tag="WHR07_000089"
     CDS             1278..5240
                     /gene="purL"
                     /locus_tag="WHR07_000089"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HEZ2129367.1"
                     /translation="MSVVLPLRGVTALSDFRVEKLLQKAAALGLPEVKLSSEFWYFAG
                     SEKALDAATVEKLQALLAAQSVEQTPKAREGLHLFLVTPRLGTISPWASKATNIAENC
                     GLAGIERIERGMAVWLEGALTDEQKQQWAALLHDRMTESVLPDFQTASKLFHHLESET
                     FSTVDVLGGGKEALVKANTEMGLALSADEIDYLVENYQALQRNPSDVELMMFAQANSE
                     HCRHKIFNADFILNGEKQPKSLFGMIRDTHNAHPEGTVVAYKDNSSVIEGAKIERFYP
                     NAAENQGYRFHEEDTHIIMKVETHNHPTAIAPFAGAATGAGGEIRDEGATGKGSRPKA
                     GLTGFTVSNLNIPGLKQPWEQDYGKPEHISSPLDIMIEGPIGGAAFNNEFGRPNLLGY
                     FRTFEEKFDGQVRGYHKPIMIAGGLGSIQAQQTHKDEIPEGALLIQLGGPGMLIGLGG
                     GAASSMDTGTNDASLDFNSVQRGNPEIERRAQEVIDRCWQLGDKNPIISIHDVGAGGL
                     SNAFPELVNDAGRGAVFELREVPLEEHGLTPLQIWCNESQERYVLSILEKDLDTFRAI
                     CERERCPFAVVGTATDDGHLKVRDDLFANNPIDLPLNVLLGKPPKTTRTDKTVTPSKK
                     PFHADDIDITEAAYRVLHLPAVAAKNFLITIGDRSVGGMTHRDQMVGKYQTPVADCAV
                     TMMGFNTYRGEAMSMGEKPTVALFDAPASGRMCVGEAITNIAAVNIGDIGNIKLSANW
                     MAACGNEGEDEKLYRTVEAVSKACQALDLSIPVGKDSLSMKTVWQDGEEKKSVVSPLS
                     LIISAFAPVQDVRKTVTPELKNVEDSVLLFVDLGFGKARMGGSAFGQVYNNMSGDAPD
                     LDDTGRLKAFYNVIQQLVAEDKLLAYHDRSDGGLFAVLVEMAFAGRCGLDIDLNLLLA
                     QTFITNHTALSQSLRTEEVKALAEWQETIARTLFNEELGAVIQVRKQDVADIINLFYQ
                     QQLHHNVFEIGTLTDENTLIIRDGQTHLISDNLIKLQQTWQETSHQIQRLRDNPACAD
                     SEFALIGDNDRSALFANLKFDVNEDIAAPFINSGAKPKIAILREQGVNGQIEMAAAFT
                     RAGFDAYDVHMSDLMAGRFRLADFKMLAACGGFSYGDVLGAGEGWAKSILFHPALRDQ
                     FAAFFADPDTLTLGVCNGCQMVSNLAEIIPGAEAWPKFKRNLSEQFEARLSMVHVPKS
                     ASLILNEMQGSSLPVVVSHGEGRADFALHGGNISADLGIALQYVDGQNQVTQTYPLNP
                     NGSPQGIAGVTNADGRVTIMMPHPERVYRAAQMSWKPEDWTELSGWYRLFAGARKALG
                     "
     gene            5335..6093
                     /gene="gloB"
                     /locus_tag="WHR07_000090"
     CDS             5335..6093
                     /gene="gloB"
                     /locus_tag="WHR07_000090"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HEZ2129368.1"
                     /translation="MKITPVKALTDNYIWMIQHGNHAVCVDPSEPSPVLEFLVRNRLM
                     LAQTWVTHPHPDHEGGAAALWRGYMESPVYGESDIEAATHTVTAGTQFTFGDGQVTVW
                     ATPGHTDRHTSYLLETSDGIHVFCGDTLFSAGCGRVFTGTIEQLYDSFQRFNRLPENT
                     LFYPAHEYTAANLDFAAHIEPDNADIQTALKAAAHTPTLPVTLAHERRVNPFLRVDLP
                     HVRDRAEALSGKTLNSSLDTFVALRELKNQYRTK"
     gene            6407..10881
                     /gene="mspA"
                     /locus_tag="WHR07_000091"
                     /gene_synonym="ausI"
                     /pseudo
     CDS             6407..10881
                     /gene="mspA"
                     /locus_tag="WHR07_000091"
                     /gene_synonym="ausI"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242022.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin/serine protease MspA"
     gene            11113..12567
                     /gene="mgtE"
                     /locus_tag="WHR07_000092"
     CDS             11113..12567
                     /gene="mgtE"
                     /locus_tag="WHR07_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEZ2129369.1"
                     /translation="MSIEHTPPTHDGETGQNHAERPSADFDRVHSLCEILEPAFEQIE
                     NGTPLEDAPLRDKLTELTVLLSELHPADVAAVLESLPPRERNIVWILVKSEDDGEVLL
                     EVSDAVRETLIESMDKDELLAAVDDLDADELAELADDLPHQVVYEALQTRDEEERAQV
                     KAAMSYEDNQVGAIMDFELVSIRADVACEVVLRYLRRFDSLPDHTDKIFVVDENDVLQ
                     GVLPIRKLLVADPEDLVENVMAKDVVRFRAEDDVEEAAQAFERYDLVTAPVVDENKKL
                     IGRVTVDEMVDVIREESEADMLNMAGLQEEEDLFAPVLDSVKNRWMWLAVNLCTAFLA
                     SRVIGAFEGSIEKIVALAALMPIVAGIGGNSGNQTITMIVRAMAMGQLTGMQAGRLLK
                     KEVGVALVNGIIWGTVMGAVSWLLYGSLGIGLVMIAAMTLNLLLAATVGVLIPVVMEK
                     FGRDPALGSSVLITAVTDSGGFLIFLGLATLFLL"
     gene            complement(12653..13561)
                     /gene="hslO"
                     /locus_tag="WHR07_000093"
     CDS             complement(12653..13561)
                     /gene="hslO"
                     /locus_tag="WHR07_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HEZ2129370.1"
                     /translation="MNQTAINRADVRTRFIFDDMPVRGLHVRLENEWQHIVKQKNYPA
                     AIRRALGELLAAGVLLSGNLKNEGTLIVQVQGQGRLKMLVAEATSDRTVRATARWDEA
                     AEIGEDESLVDLLGEGGVFVLTLQPKDGEPWQGVVPLEGDGIAQMLMNYMKRSEQLDT
                     HIVLSASDEAAGGLLVQRLPEEVLDEEAWEHVSTLARTLTAGELAELDAQHVLYRLFH
                     ETPPRVFEPETFEFSCTCSRGKVSDMLLMLGGEEVGGVVVEQGSIEVDCDFCHSKYVF
                     DETDVNALFGEDVVGVAKGLPRHIVQ"
     gene            13806..14561
                     /locus_tag="WHR07_000094"
     CDS             13806..14561
                     /locus_tag="WHR07_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEZ2129371.1"
                     /translation="MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAED
                     EQPVLPINRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMGLN
                     EQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSISTGFDCSGFMQHIFKRAM
                     GINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTG
                     KNIEITSLSHKYWSGKYAFARRVKKNDPSRFLN"
     gene            14580..14798
                     /locus_tag="WHR07_000095"
     CDS             14580..14798
                     /locus_tag="WHR07_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129372.1"
                     /translation="MSMPEMPKWYDDDGQIVSCTEKVKVMSENMAELYQTAQDAFEDA
                     LLMGCGERQLRDYLLALIEGLENPYRKV"
     gene            14943..15287
                     /locus_tag="WHR07_000096"
     CDS             14943..15287
                     /locus_tag="WHR07_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HEZ2129373.1"
                     /translation="MNIIRALLIILGCLAAGETAVFLAGIKLPDSIVGMGVLFALLQA
                     GWVKTSWLQQLTDALMANLTLFLVPPCVAVISYLDLIADDWFSILVSASASTLCVLLV
                     TGKVHRWIRSII"
     gene            15287..15979
                     /locus_tag="WHR07_000097"
     CDS             15287..15979
                     /locus_tag="WHR07_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HEZ2129374.1"
                     /translation="MNEILRQPSVLLFLTLAVYALAIIVRTRTGNIFCNPVLVSTIVL
                     IAYLKILDIDYAVYHNAAQFIDFWLKPAVIVLAVPLYQNRRKIFNQWLPVIVSQLAGS
                     VTGIVTGMYFAKWLGAEREVVLSLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLV
                     GQIAGYKMLKNTVVMPSSVGMSLGTASHAMGIAASLERSRRMAAYAGLGLTFNGVLTA
                     LIAPLLIPVLGF"
     gene            16046..17266
                     /gene="argJ"
                     /locus_tag="WHR07_000098"
     CDS             16046..17266
                     /gene="argJ"
                     /locus_tag="WHR07_000098"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HEZ2129375.1"
                     /translation="MAVNLTEKTAEQLPDIDGIALYTAQAGVKKPGHTDLTLIAVAAG
                     STVGAVFTTNRFCAAPVHIAKSHLFDEDGVRALIINTGNANAGTGAQGRIDALAVCAA
                     AARQIGCKPNQVLPFSTGVILEPLPADKIIAALPKMQPAFWNEAARAIMTTDTVPKAA
                     SREGKVGDKHTVRATGIAKGSGMIHPNMATMLGFIATDAKVSQPVLQLMTQEIADETF
                     NTITVDGDTSTNDSFVIIATGKNSQSEIDNIADPRYAQLKELLCSLALELAQAIVRDG
                     EGATKFITVRVENAKTRDEARQAAYAVARSPLVKTAFFASDPNLGRLLAAIGYAGVVD
                     LDTDLVEMYLDDILVAEHGGRAASYTEAQGQAVMSKAEITVRIKLHRGQSAATVYTCD
                     LSHGYVSINADYRS"
     gene            17326..18735
                     /locus_tag="WHR07_000099"
     CDS             17326..18735
                     /locus_tag="WHR07_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEZ2129376.1"
                     /translation="MTSTFPRRLARKIRQTRRLSRKSIAFLFLLAGSALVALTALFFA
                     HLADFALELNAKLVQQYPWFAWVALPLGLPLIAWLTRKFAPFTAGSGIPQVIASLSLP
                     YGAQKTRLIRLGQTLLKIPLTFLGMLFGVSIGREGPSVQVGAAVMGAWGAWCKKHGLA
                     FKGMQENDLMAAGAAGGLAAAFNAPLAGVIFAIEELGRGIMLRWERQILLGVLASGFI
                     QVAIQGNNPYFSGFNGGVLEHIFLWVALSGLVCGAAGGLFGRLLYRGAAAFAPRKIRG
                     FIRNRPLLLAALMGLLLALLGTFYQGKTYGTGYHEAAQALHGIYEAPFGLAAAKWLAT
                     VFSYWAGVPGGIFTPSLTIGAVLGEHIAAIADISQGANIIVLICMAAFLAGATQSPIT
                     SAVVVMEMTGGQSLLFWMLIACIFASQVSRQFSPRPFYHASGMRFRQRVLQETAAQTG
                     NAPARPQTANSKTGMPSEN"
     gene            18924..20315
                     /gene="hrpA"
                     /locus_tag="WHR07_000100"
     CDS             18924..20315
                     /gene="hrpA"
                     /locus_tag="WHR07_000100"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HEZ2129377.1"
                     /translation="MFPDFSQTLSKDRHFLQSAFKNPNKYGGLSKVEEKYRKSHEIFL
                     KRLAALPKPEFDNTLPVHEKLDEIKKTVAEHQVTIICGETGSGKTTQLPKICLELGRG
                     VAGLIGHTQPRRLAARSVAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGIL
                     LAETQTDRYLAAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAER
                     FSRHFNGAPVLEVSGRTYPVEILYRPLTGKDEDDAEVELTDAIVDAADELARHGEGDI
                     LVFLPGEREIRETAEALRKSTLRRNDEILPLFARLSHAEQHKIFHPSGAKRRIVLATN
                     VAETSLTVPGIKYVIDTGLARVKRYSARAKVEQLHVEKISQAAARQRSGRCGRVSAGV
                     CIRLFSEEDFNSRPEFTDPEIVRSNLAAVILRMASLNLGDVAAFPFLEMPDSRYINDG
                     FQVLLELGAVEAV"
     gene            20416..21543
                     /locus_tag="WHR07_000101"
     CDS             20416..21543
                     /locus_tag="WHR07_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129378.1"
                     /translation="MKHLLIDFENVQPQNLDKLPTENTHIWLFIGVLHKMLPISLVQS
                     LLRFGERVHLVQLQKTGKNALDFYLSYYLGQITATDPNAQIGILSRDGGYDVLVEHIL
                     KNHQAKGIVRLANIDEVQHQKITTEPPSALLENTPQPETTLKPQQPLTSYFQAALTAL
                     RRPDAFRPCRLHNLRQNLRKHILSDLFKEKTDEECEITTANVINKLKAQNFISIDEQE
                     TVSYHLSDNDLLQRIQRHILSQRPKTYADFQAVVQNRADALHLTVGTNDIQSFARHLR
                     DQNLIRQNNGKIEYAPFTEPKPQPTPKQPKKTAWEPDEIIWKKVIAALSLKNRPNKTK
                     TLRNTIQALTKSNAQETDKLLQHLQDTQVLRIDGTKIVYIK"
     gene            21721..23297
                     /gene="lpt3"
                     /locus_tag="WHR07_000102"
                     /pseudo
     CDS             21721..23297
                     /gene="lpt3"
                     /locus_tag="WHR07_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223145.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     transferase"
     gene            23399..26500
                     /locus_tag="WHR07_000103"
     CDS             23399..26500
                     /locus_tag="WHR07_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3418 domain-containing protein"
                     /protein_id="HEZ2129379.1"
                     /translation="MDARSNPANVSDDLQNSSGHIGVNTRYRLTKLGEQMARLPIDPK
                     IARILLAAKKHDCMAEILVIASALSIQDPRERPLEARDAAAKAHERFTDKQSDFLAYL
                     NIWDSFQRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQTAIEMGLTTKEAA
                     FRRPPEGRQLTSSENAGDQDLSAKLKQKQLDKKQHRAQIRAAKEAGYEQIHRALLTGL
                     IANVGMKSPDGNDYTGARGSRFHLFPASALFKAKPKWVMAAELVETTRLYARDVAVIQ
                     PEWIEQEAPHLVRYHYFEPHWEQKRGEVVASERVTLYGLTVLPRRPVSYGKVAPEEAR
                     EIFIRSALVAQECDLKADFFVHNKKLIKEITELEHKSRKQDVLVDDEALFAFYNERLP
                     DFYTADAVSDDLHPTNPQQTAPSYAREERREGKTVAAQTNFSATAANPLPNPLPQERE
                     QSAAASAVSNDLHPANPQQTAPSPVGEGRGEGKTVASQTNFSATTANPLPNPLPNPLP
                     QEGEQSAAASAVSNDPQPQKQPAPQKDRLKPLPLADIRTFQVWLKTAERENPRLLFLS
                     RDDLMQHAAAHITEEQFPKFWQTADGKFKLSYRFEPHHPLDGVTLTLPLTVLNRLHAP
                     SLEWLVPGMLREKIQLLIKALPKQIRRICVPVPDFITQFLSQNPDRNAPILPQLAQAI
                     AKTAGDIRILEQINQDEWAAFRLPEHCYFNLRIIDDGGQELAGGRKLHELQQQLGQAA
                     AVTFRDNTQEFERDNVTTWDIGTLPESIKFARGKQQLTGYLGLQKEKDGRIALRLCDT
                     TEAAEQAHRQGVIELMKLQLKEQVKDLNKGIQGFTQAAMLLKHINADTLCDDLTQAVC
                     DRAFIGEDELPRNEKAFKEQIKRARSRLPAVKEALSRYLQETAAAYAELNSKLGKHPL
                     THLLRQRLQTLLAAGFATRTPWAQWPRLPIYLKAMTLRLEKYSSNPARDAAREADIQE
                     LEQMWQEKTDSLIKQGLPISDGLAAFKWMIEELRVSLFAQELKTPYPVSVKRLLKMWE
                     DLN"
     gene            complement(26523..26945)
                     /locus_tag="WHR07_000104"
     CDS             complement(26523..26945)
                     /locus_tag="WHR07_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="very short patch repair endonuclease"
                     /protein_id="HEZ2129380.1"
                     /translation="MTDIFTTSKRSFVMSKIHSKETKPEILVRKFLFSQGFRYRKNDK
                     RYAGKPDIVLPKYKTVVFIHGCFWYGHSCNKGHIPKSNTDFWLEKITKNCERDIKNET
                     ELEKIGFKVIVVWECELKNKAIGRERLNRLVREIKDAV"
     gene            complement(26949..28595)
                     /locus_tag="WHR07_000105"
     CDS             complement(26949..28595)
                     /locus_tag="WHR07_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02391 family protein"
                     /protein_id="HEZ2129381.1"
                     /translation="MSEEKLKMSFEPTVIEHLGVKMYSHTVPAIAELIANAYDACATE
                     VEVRLFDKPEHKIVIKDNGIGMSFDEINDFYLRIGRNRREEKQASPCGRIPTGKKGLG
                     KLALFGLGNKIEISTIQGNERVTFTLDYAEIKKSERIYQPEFQKESVEPNTENGTTIT
                     LTELTKKQGYPLDNYVEHLSRLFDFPAQDFKIKVSLNGSEPKIIDGNLKYDLVTPQFE
                     WEYQDLATNISSLSSKFEQYEYSGLIQGKFITTEKPLKNNMKGITLFANGRMVNMPEF
                     FTDSESSHFYSYLTGWLSIDFIDNDDEDLIATDRTSLDWKHPKTSKLRVFLGEIVRAI
                     GQDWRKRRKKEKDDEVKGESGVDIENWKNKLPEKEREPVEVILNRLEDSELTNKEQAE
                     VISALHSIIPEYPYYHWRHLHQDLHTACNDFYNEKKDYLSAAIEAVKVFENKVQKQTG
                     LHSIDGRELIEQAFGSKNSILLLTNNKTKAEQNLEDGLEQLACGTWTGFRNPVQHELR
                     ANLSPSIFNDKDALDLISLVSYLLRKVEQTKKRSKVVSSK"
     gene            complement(28609..29664)
                     /locus_tag="WHR07_000106"
     CDS             complement(28609..29664)
                     /locus_tag="WHR07_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HEZ2129382.1"
                     /translation="MKNSKLKAVDFFCGGGGMSYGMQSAGIQVLAGIDYEPSCKETYE
                     ANINAKFIQADVFELQPETLEKELGLKKNDDDLILIGCSPCQYWSVIQTDKRKSEKSK
                     SLLLEFQRFVEYFNPGYVVVENVPGILSRMKESRLDNFIKLLEEKGFTVHFGIHNTAD
                     YGIPQSRKRFTLIANRITKEKLEPVKYSGKRLTVRDVLGMENGFPKIIAGHQDETDFM
                     HSCAGLSDINLKRLALIPKNGGNRLAFAHIPELQLECFIGKDNSFKDTFGRLWWDKPA
                     PTITTKFFSISNGRFAHPEEDRALSLREGATLQSFPRNYVFKAGSRDKIARLIGNAVP
                     PMYAEKIGRAIVDNIEC"
BASE COUNT         7623 a         9020 c         7039 g         6387 t
ORIGIN      
        1 acaaatatcg taaaaattga tgaaaaatta gaagccgtgg ctgataccgt cgacaagcat
       61 gccgaagcat tcaacgatat cgccgattca ttggatgaaa ccaacactaa ggcagacgaa
      121 gccgtcaaaa ccgccaatga agccaaacag acggccgaag aaaccaaaca aaacgtcgat
      181 gccaaagtaa aagctgcaga aactgccgct ggcacagcta atactgcagc cgacaaggcc
      241 gaagctgtcg ctgcaaaagt taccgacatc aaagctgata tcgctacgaa caaagataat
      301 attgctaaaa aagcaaacag tgccgacgtg tacaccagag aagagtctga cagcaaattt
      361 gtcagaattg atggtctgaa cgctactacc gaaaaattgg acacacgctt ggcttctgcc
      421 gaaaaatcca ttaccgaaca cggtacgcgc ctgaacggtt tggatagaac agtgtcagac
      481 ctgcgtaaag aaacccgcca aggccttgca gaacaagccg cgctctccgg tctgttccaa
      541 ccttacaacg tgggtcggtt caatgtaacg gctgcagtcg gcggctacaa atccgaatcg
      601 gcagtcgcca tcggtaccgg cttccgcttt accgaaaact ttgccgccaa agcaggcgtg
      661 gcagtcggca cttcgtccgg ttcttccgca gcctaccatg tcggcgtcaa ttacgagtgg
      721 taagcagcat ctcccgataa agaaaccgca gccctgcaag gctgcggttt ttattttcta
      781 tccggccgtc aaaccgccgc gtccgaacgt tcgcccgtgc ggatacggat tgcctcctcg
      841 accggcagca caaaaatctt gccgtcgccg atttttcccg aacgcgccac ctcgacaatc
      901 acgtcaatcg cgcgttccac agcatcatcc gccaacacca gctcgatttt gaccttgggc
      961 aggaaatcga cagcgtattc cgcgccccgg taaatctccg tatgcccctt ctgcctgccg
     1021 aaccctttga cctcgctgac ggtcataccc gtaatgccga tttccgtcaa cgcctcgcgc
     1081 acgtcgtcga gtttgaacgg tttgacaatc gcctcgattt ttttcataaa atttcctttg
     1141 aacaaacaat acaaacacat ccgaaaaacg ggaacctccc gtcagattgt caacatttta
     1201 agccaaaata cccaagcaat acagccccgt tgcgcgtata atgacagatt ttccaaccgc
     1261 atttgagagc cgaatccatg tctgtcgttt tgcccttgcg cggcgttacc gccctttccg
     1321 atttccgtgt cgaaaaactc ttgcaaaaag ccgccgcact cggactgccc gaagtcaaat
     1381 taagcagcga attttggtat ttcgccggca gcgagaaagc attggatgcc gcgactgtcg
     1441 aaaaactgca agccttgttg gcggcgcaaa gcgttgaaca aacgccaaaa gcgcgcgagg
     1501 gcttgcattt gtttttggta acgccccgtt tgggtacgat ttcgccgtgg gcttccaagg
     1561 cgaccaatat cgcggaaaac tgcggtttgg caggcatcga gcgcatcgag cgcggcatgg
     1621 cggtgtggct ggaaggtgcg cttaccgatg aacagaaaca gcaatgggcg gcgttgctgc
     1681 acgaccgcat gaccgaatcc gtgctgcccg attttcagac ggcatccaaa ttattccacc
     1741 atctcgaatc cgaaaccttt tccaccgttg atgttttagg cggcggtaaa gaggctttgg
     1801 tcaaagccaa taccgaaatg ggtttggcac tctccgccga cgaaatcgat tatctggttg
     1861 aaaactatca ggctttgcaa cgcaatccgt ccgatgtgga gctgatgatg ttcgcgcagg
     1921 caaacagcga acactgccgc cacaaaatct tcaacgccga cttcatcctc aacggcgaaa
     1981 aacaaccgaa atcccttttc ggcatgatac gcgacacgca caacgcgcat cccgaaggca
     2041 cggtcgtcgc ttataaagac aattcgtccg tgatcgaagg cgcgaaaatc gagcgtttct
     2101 atccgaatgc ggcggaaaac caaggctacc gtttccacga ggaagacacg catatcatca
     2161 tgaaagtgga aacgcacaac cacccgaccg ccatcgcgcc gtttgcaggc gcggcaacgg
     2221 gcgcgggcgg cgaaatccgc gacgaaggcg caacgggcaa aggttcgcgt ccgaaagcag
     2281 gcttgaccgg ctttaccgtg tccaacctca acatccccgg cctcaaacag ccgtgggaac
     2341 aagattacgg caagccggaa catatttcct cgccgctgga catcatgatt gaaggcccga
     2401 tcggcggcgc ggcgttcaac aacgaattcg gccgccccaa cctcttgggc tacttccgca
     2461 cttttgaaga aaaatttgac ggtcaggttc gcggctacca caaaccgatt atgattgccg
     2521 gcggcttggg cagcattcag gcgcagcaga cgcataaaga cgaaatcccc gaaggcgcgt
     2581 tgctgatcca actgggcggc ccgggcatgc ttatcggctt gggcggcggc gcggcttctt
     2641 cgatggatac cggcacgaac gacgcttctt tagacttcaa ctccgtacaa cgcggcaacc
     2701 ccgaaatcga acgccgcgcg caggaagtca tcgaccgctg ctggcagctc ggcgacaaaa
     2761 acccgattat ctccatccac gacgtgggcg caggaggttt gtccaacgcc ttccccgaac
     2821 tggtcaacga tgccggacgc ggcgcggtat tcgagctgcg cgaagtgccg ttggaagaac
     2881 acggtttaac gcctttgcaa atctggtgca acgaatcgca agagcgttat gtgttgtcga
     2941 ttttggaaaa agatttggat accttccgcg ccatctgcga acgcgaacgc tgcccgtttg
     3001 ccgtggtcgg tacagcgacc gacgacggtc atttgaaagt gcgcgacgat ttgttcgcca
     3061 acaaccccat cgatttgccg ttgaacgtct tgctcggcaa accgcccaaa accacgcgta
     3121 ccgacaaaac agttacgcca tctaaaaaac cgtttcacgc cgacgatatc gacatcaccg
     3181 aagccgccta ccgcgttttg cacctgcctg ccgtagccgc caaaaacttc ctgattacca
     3241 tcggcgaccg cagcgtcggc ggcatgaccc accgcgacca aatggtcggc aaataccaaa
     3301 cccccgtagc cgactgcgcc gttaccatga tgggcttcaa tacctatcgc ggcgaagcaa
     3361 tgtctatggg cgaaaaaccg accgtcgccc tgtttgacgc gcctgcttcg ggcagaatgt
     3421 gcgtcggcga agccatcacc aacatcgcgg cggtcaacat cggcgacatc ggcaacatca
     3481 agctctccgc caactggatg gcggcgtgcg gcaacgaagg cgaagacgaa aaactctacc
     3541 gcaccgtcga agcggtttcc aaagcctgtc aggcattgga tttgagcatt cccgtgggca
     3601 aagacagcct gtcgatgaaa accgtatggc aggatggcga agagaaaaaa tccgtcgttt
     3661 cgccgttgag cctgattatc tccgcgttcg cgccggttca agacgtacgc aaaaccgtta
     3721 cgcccgaatt gaaaaacgtc gaggacagcg tattgctgtt tgtcgatttg ggcttcggca
     3781 aagcgcgtat gggcggctct gcattcggtc aggtatacaa caacatgagc ggcgacgcgc
     3841 ccgatttgga cgacacaggc cgtctgaaag cgttttacaa cgtgattcaa cagcttgtcg
     3901 ccgaagacaa actcttggca taccacgacc gcagcgacgg cggcttgttt gccgttttgg
     3961 tagaaatggc gtttgcaggg cggtgcggct tggatataga tttaaattta ttgcttgcac
     4021 aaacatttat taccaaccat accgctctgt ctcaatcatt gcggactgaa gaggtaaaag
     4081 cgttggctga atggcaagaa accattgccc gcacattatt taatgaagag ttgggtgctg
     4141 ttatccaagt tagaaaacaa gatgttgccg atattatcaa tttattctat caacaacagc
     4201 tgcatcataa tgtctttgaa atcggtacgt taactgatga gaacacgtta atcatccgcg
     4261 acgggcaaac gcaccttatt tctgacaacc taatcaaact gcaacaaacc tggcaagaaa
     4321 ccagccatca aatccaacgc ctgcgcgaca accctgcctg cgccgacagc gagtttgccc
     4381 tgattggcga caacgaccgc agcgcattgt ttgccaacct gaaattcgac gtgaacgaag
     4441 acatcgccgc gccgtttatc aacagcggcg cgaaacccaa aatcgccatc ctgcgcgaac
     4501 agggcgtgaa cgggcaaatc gaaatggccg ccgccttcac ccgcgccgga ttcgatgctt
     4561 acgacgtgca tatgtccgac ctgatggcag gccgcttccg ccttgccgac ttcaaaatgc
     4621 tggcggcgtg cggcggcttc agctacggcg acgtactcgg cgcgggcgaa ggctgggcga
     4681 aatccatcct gttccaccct gccttgcgcg accaatttgc cgccttcttt gccgatccgg
     4741 acacgctgac attgggcgtg tgcaacggct gccagatggt cagcaacctc gccgagatta
     4801 tcccgggtgc agaggcatgg cctaaattca aacgcaacct gagcgaacag tttgaagcac
     4861 gcctgagcat ggttcacgtt ccgaaatcag cgtcgctgat tctgaacgaa atgcaaggct
     4921 ccagcctgcc tgtcgtggtc agccacggcg aaggccgcgc cgacttcgcg cttcacggcg
     4981 gcaatatttc cgccgatttg ggcatcgcgc tgcaatatgt ggacggtcaa aaccaagtga
     5041 cccaaaccta cccgctcaac cccaacggct cgccgcaagg catcgccggc gttaccaacg
     5101 ccgacggccg cgtgaccatc atgatgccgc atccggaacg cgtgtaccgt gccgcacaaa
     5161 tgagctggaa accagaagac tggacggaat tgtccggctg gtaccgcctc tttgccggcg
     5221 cacgtaaagc cttgggctaa ccgccctact caaaccaatg ccgtctgaag aatatttcag
     5281 acggcgttcc ggcataccat cctttaaacg gtatccgtcc accgaggaac actcatgaaa
     5341 atcacccccg tcaaagccct aaccgacaac tacatctgga tgatacagca cggcaaccat
     5401 gccgtctgcg tcgacccttc cgaaccctcg cccgtcttgg aattcctcgt ccgcaaccgc
     5461 ctcatgcttg cccaaacatg ggtaactcac ccccaccccg accacgaggg cggtgcggcg
     5521 gcactctggc gcggctacat ggaatcgccc gtttacggcg aatccgacat cgaagcagca
     5581 acccacaccg taaccgccgg cacccaattc accttcggcg acggacaggt taccgtttgg
     5641 gcaacacccg gccacacaga ccgccacacc agctaccttc tcgaaacttc agacggcata
     5701 cacgttttct gcggcgacac cctgttttcc gccggctgcg gacgcgtgtt taccggcaca
     5761 atcgaacagc tttacgacag cttccaacgc ttcaaccgcc tgcctgaaaa caccctgttc
     5821 tacccggcac acgaatacac cgccgccaac ctggattttg ccgcccatat cgagccggac
     5881 aacgccgaca ttcagacggc actgaaagcg gcggcgcata cgcctaccct gcccgttacc
     5941 ctcgcgcacg aacgccgcgt caatccgttt ttgcgcgtcg acctgccgca cgtcagagac
     6001 cgcgccgagg cattgagcgg gaaaacgtta aacagcagcc tcgatacctt tgtcgcgctg
     6061 cgtgaactta aaaaccaata ccggacgaaa taaaacaacg ggaaaacgca gccattccta
     6121 ggatttttat taaaatctta aataaaatca tacaatcatc gccaatagac gaaaggacac
     6181 cgttgcctta taatcaaaca aaaacaaaat atataatata gtggattgaa tttaaatcag
     6241 gacaaggcga cgaagccgca gatagtacgg caaggcgagg caacgctgta ctggtttttg
     6301 ttaatccact atattgttaa tccactatat aaatccagca caaaacggga tcggtgattc
     6361 ttgtccgcaa gaatcgttga ttttctctat tacacggata atcatcatgc gcttcacaca
     6421 caccacccca ttttgttccg tattgtccac cctcggtctt tttgccgttt cccctgctta
     6481 ctcatccatt gtccgcaacg atgtcgatta ccaatatttt cgcgactttg ccgaaaataa
     6541 aggcgcgttc gccgtaggtg caagcaatat ttccatccaa gacaagcaag gcaaaatatt
     6601 aggcagggtt ctcaacggca tccccatgcc cgacttccga gtcagcaacc ggcaaaccgc
     6661 catcgccacc ctgattcacc cccaatacgt caacagtgtc aaacacaacg tcggctacgg
     6721 ttccatacaa ttcggcaacg acacccaaaa tccagaagaa caagcctata cctaccgcct
     6781 cgtatcacgc aacccgcacc cggactacga ctaccacctt ccccgcctca acaaactggt
     6841 taccgaaatc tcacctgccg cactcagcag cgtacccttg cttggaaacg gccagccaaa
     6901 ggccaatgcc tacctcgata ccgaccgctt cccctacttt gtacgactcg gctcaggcac
     6961 gcaacaagtc cgcaaagcag acggcacgcg tacacgaacc gccccggcat accaatacct
     7021 gaccggcggc acgccgctga aagtattggg gttccaaaac cacggcttac tcgtcggcgg
     7081 cagcctgacc gaccaacccc ttaacaccta cgcaatcgcc ggagacagcg gttcccccct
     7141 gtttgccttc gacaagcatg aaaaccgctg ggtgcttgcg ggcgtactca gcacctacgc
     7201 cggcttcgat aatttcttca acaaatacat cgtcacgcaa cccgaattca tccgttccac
     7261 catccgccaa tacgaaaccc ggctggatgt cgggctgacc accaacgaac tcatatggcg
     7321 cgacaacggt aatggcgaca gcaccctgca agggctcaac gaacgcatca ccctgcccat
     7381 tgcaaaccct tcgcttgccc cacaaaacga cagcaggcac atgccgtctg aagatgccgg
     7441 caaaacgctc atcctatcca gcaggttcga caacaaaaca ctgatgctgg cagacaatat
     7501 caaccaaggc gcaggcgcat tgcagttcga cagcaacttc accgtcgtcg gtaaaaacca
     7561 cacatggcaa ggtgcaggcg ttatcgtagc cgacggcaaa cgcgtcttct ggcaagtcag
     7621 caaccccaaa ggcgaccggc tctccaaact gggcgcaggc acgcttatcg ccaacggaca
     7681 aggcatcaac cagggcgaca tcagcatcgg ggaaggcact gtcgtactcg cccaaaaagc
     7741 tgcttcagac ggcagcaaac aagcattcaa ccaagtcggc atcaccagcg gcaggggtac
     7801 ggccgtcctc gccgacagcc agcaaatcaa atccgaaaac ctctatttcg gcttcagggg
     7861 cggacggctc gacctcaacg gcaacaacct tgcctttacc catatccgcc atgcggacgg
     7921 cggcgcgcag atcgtcaacc acaaccctga ccaagccgcg acactgacgc tgaccggcaa
     7981 ccccgtcctc agtcctgagc atgtcgagtg ggtgcaatgg ggcaaccgtc cgcaaggcaa
     8041 cgcggcggtt tacgaataca tcaacccgca ccgcaaccgt cggaccgact acttcatact
     8101 caaacccggc ggcaacccgc gcgaattttt cccgttaaat atggaaaact caacaagctg
     8161 gcaatttatc ggcaacaaca ggcaacaggc cgccaaacaa gtcgcccaag ccgaaaatgc
     8221 ccgccccgac ctaattacct tcggcggata cttgggtgag aacgcgcaaa cgggcaaagc
     8281 cgcaccgagt tacagcaaaa ccaatatcga atgggtgaat ggtccaaaca ccccacacaa
     8341 gccctcgccc tatacgaata cgccaacccg cacaggggca ggcgtaccga cgattaccgc
     8401 ctcaaagaag gcggcaaccc cggcgcctac ttcccatgga atgcctacag cacccaagac
     8461 tgggaatttc tcggacatga ccggcgaagc agccatagaa aaaaaccgcc atatcgcaaa
     8521 tgccgccgta tacggccggc ccgaataccg ttacaacggc gcactcaacc tgcactatcg
     8581 tcccaaacgc accgacagca cgctgttgct caacggcggc atgaacctta acggggaagt
     8641 cttgattgag ggcggcaata tgattgtgtc aggcaggccc gtaccccatg cctacgacca
     8701 ccaggccaaa cgcgaacccg ttcttgaaaa cgaatggacc gacggcagct tcaaggctgc
     8761 acggttcacc ctacgaaacc atgcccgact gacagcaggg cgcaataccg cgcatctgga
     8821 cggcgacata accgcataca atctgtccgg catcgacctc ggctttatcc aaggcaaaac
     8881 accggaatgc taccgctcct accatagcgg cagcacccac tgcacaccca acgccgtttt
     8941 aaaagccgaa aactatcgtg cactacctgt aacgcaagta cgcggcgaca ttacccttaa
     9001 cgaccgttca gagctccgcc tgggcaaagc acacctgtac ggcagcatcc gtgccggcaa
     9061 agacaccgca gtccgcatgg aagcagacag caactggaca ctttcccagt ccagccacac
     9121 cggcgcactg acgcttgacg gcgcacaaat taccctgaac cccgatttcg ccaataatac
     9181 acacaacaac cgcttcaaca cactgaccgt caacggcaca cttgacgggt tcggcacatt
     9241 ccgattcctg accggcatcg tccgaaaaca aaatgccccc ccctcaaact ggaaggggac
     9301 agccgcggcg cattccaaat ccacgtcaaa aacaccggac aagaacctca aacaaccgaa
     9361 tcgcttgcac ttgtgagcct caatccgaaa cacagccacc aagcccgatt caccctccaa
     9421 aacggctatg ccgatttggg tgcctaccgc tacatcctcc gcaaaaacaa caacggatac
     9481 agcctgtaca acccgctcaa agaggccgaa cttcaaattg aagccacgcg tgcggaacat
     9541 gagcgcaacc aacaggcata caaccaatta caggcaaccg acatcagcag acaggttcaa
     9601 catgactctg acgcgaccag gcaggcacta caggcctggc agaacagtca aaccgaactt
     9661 gcccgcatcg acagccaagt ccaatatctg tccgcccaat tgaaacagac agacccgctg
     9721 accggcattc tgacgcgtgc ccaaaacctg tgtgccgcac aaggatacag tgtcgatatc
     9781 tgccgtcagg ttgccaaagc cgccgacacg aacgacctga cactcttcga aaccgaactg
     9841 gatacgtata tagaacgtgt agaaatggcc gaatccgaac ttgacaaagc acggcaaggc
     9901 ggcgatgcgc aagccgtcga aacagcccgg cacgcctacc tgaacgcact caaccgtctg
     9961 tcccgacaaa tccacagttt gaaaaccggc gttgccggca tccgtatgcc gaacctggcc
    10021 gaactgatca gccggtcggc caacaccgcc gtttccgaac aggccgccta caataccggc
    10081 cggcaacagg cgggacgccg catcgaccgc caccttaccg atccgcagca gcaaaacatc
    10141 tggctggaaa ccggtacgca acaaaccgac taccatagcg gcacacaccg tccctaccaa
    10201 caaactacca actatgcaca tatcggcatc caaaccggca tcaccgaccg tctcagtgtc
    10261 ggtacgattt taaccgatga gcgcacaaac aaccgttttg atgaaggcgt atccgcccga
    10321 aaccgcagca acggcgcaca tctgttcgtc aaaggggaaa acggcgcact ctttgccgcg
    10381 gcagatttag gctacagcaa cagccgtacc cgatttaccg attatgacgg ggctgccgtc
    10441 cgccgccacg catgggatgc aggcatcaac accggcatca aaatcgatac cggcatcaac
    10501 ctcagaccct atgccggcat ccgtataaac cgcagcaacg gcaaccggta cgtactcgac
    10561 ggcgcagaga taaacagccc ggcgcaaatc caaaccacat ggcatgccgg catccgtctc
    10621 gataaaaccg tcgaactggg tcaagccaag ctgacccccg ctttcagcag cgattactac
    10681 catacccgcc aaaacagcgg ttccgccctc agcgtcaacg accgtacctt actgcagcaa
    10741 gccgcccacg gcacactgca taccctgcaa atcgacgccg gatacaaagg ctggaacgcc
    10801 aaacttcatg ccgcttacgg caaagacagc aacaccgccc gccacaaaca ggcaggaatc
    10861 aaaataggct acaactggta acaagccgat aaaaatgccg tctggaaccc gcgtttcaga
    10921 cggcatttgc gttaaaaata gtaaaccgtt ccaaaaggga gtagaatagt gccgtttcca
    10981 accctgcgcc tgtaccgtca ggcttttatt atggaccttc ccagttcgtt tttactgaac
    11041 gccccttccg attccaaacg acaataacca tcccgccgga atgcctcccc gcacacgacg
    11101 ggcggagcat ttatgagcat cgaacacact cctccgacac acgacggcga aaccggtcaa
    11161 aaccatgccg aacgcccttc cgctgatttc gaccgtgtcc actccctctg cgaaatcctc
    11221 gaacctgcct ttgaacaaat cgaaaacggc acaccgctcg aagacgcgcc gctgcgcgac
    11281 aagctgaccg agctgaccgt cctcttgagc gagctgcacc ctgccgacgt ggcggcagtg
    11341 ttggaatcgc tgccgccgcg cgaacgcaat atcgtctgga ttctggtcaa atcggaagac
    11401 gacggcgaag tcttgctgga agtgtccgat gcggtgcgcg aaacgctgat cgagtcgatg
    11461 gacaaagacg aattgttggc ggcggtcgat gatttggacg cggacgaatt ggcggagctg
    11521 gcagacgatt tgccgcacca agtggtttat gaagccttgc agacgcgcga cgaggaagag
    11581 cgcgcacaag tcaaagcggc aatgtcctac gaagacaacc aagtcggtgc gattatggac
    11641 ttcgagttgg tcagcatccg cgccgatgtc gcctgtgaag tggtgctgcg ctatctgcgc
    11701 cgcttcgaca gcctgcccga ccataccgac aagatttttg tggtcgatga aaacgacgta
    11761 ctgcaaggcg tgctgcccat ccgcaaactt ttggtcgccg atcccgaaga tttggtggaa
    11821 aacgtgatgg cgaaagatgt cgtgcgtttc cgcgccgaag acgacgtgga agaagcagcg
    11881 caggcattcg aacgctatga cttggttacc gcgcccgtcg tcgatgaaaa caaaaagctc
    11941 atcggcaggg tgaccgttga cgaaatggtg gacgtgatcc gcgaagaatc cgaagcggat
    12001 atgttgaaca tggcaggttt gcaggaagag gaagacctgt tcgcccccgt cttggattcc
    12061 gtcaaaaacc gctggatgtg gctcgccgtc aacctctgca ccgccttcct cgccagccgc
    12121 gtcatcggcg cgtttgaagg cagcatcgaa aaaatcgtcg cactcgccgc gctgatgccc
    12181 atcgtcgccg gcatcggcgg caactcgggc aaccagacga ttaccatgat tgtccgcgcg
    12241 atggcgatgg ggcaactgac aggcatgcag gcaggcaggc tgttgaaaaa agaagtcggt
    12301 gtcgccttgg tcaacggcat catttgggga acggtcatgg gcgcagtatc ttggctgctt
    12361 tacggcagcc tcggcatcgg gctggttatg attgccgcga tgacgctcaa cctcctgctg
    12421 gcggcaaccg tcggcgtatt aattcccgtg gtaatggaaa agttcggacg cgatcccgca
    12481 ctgggcagct cggtgctgat taccgccgtt accgactccg gcggcttcct gattttcttg
    12541 gggctcgcca ccctattcct gctttaaatg ccgtctgaac ccgcgcaaaa atgccgtctg
    12601 aagcggaagc tgcttcagac ggcatttgac tatttatcct tgttgcacaa gattattgga
    12661 cgatatgccg gggcagccct ttggcaacgc cgaccacatc ctccccgaac agcgcgttga
    12721 catcggtttc gtcaaacaca tatttgctgt ggcagaaatc gcaatcgact tcgatgctgc
    12781 cttgttccac caccacgccg ccgacttctt ccccgcccag catcaacagc atatcgctga
    12841 ctttgccgcg cgaacaggtg catgaaaatt caaacgtttc cggctcgaac acgcgcggcg
    12901 gcgtttcgtg gaacaagcgg tacaaaacat gttgcgcatc caattctgcc aactcgcccg
    12961 ccgtcagcgt gcgcgccagc gtactgacgt gttcccatgc ctcttcatcc aacacctctt
    13021 caggcagacg ctgcaccagc agaccgcccg ccgcttcatc gcttgcagac aggacgatgt
    13081 gcgtatcaag ctgttcggaa cgtttcatat agttcatcaa catttgcgcg ataccgtcgc
    13141 cttccaaagg cactacgccc tgccagggtt cgccgtcttt gggctgcagc gtcagcacga
    13201 atacgccgcc ctcgcccaaa agatcgacca aactttcatc ttcaccgatt tctgccgcct
    13261 cgtcccaccg cgcggtcgca cggacggtac ggtcggaagt cgcttccgca accagcattt
    13321 tcagccgccc ctgcccctga acctgcacaa tcagcgtgcc ttcgtttttg aggttgcccg
    13381 acagcagaac accggcagcc aacagctcgc ccaaggcgcg gcggatggcg gcgggatagt
    13441 ttttctgttt tacaatgtgc tgccactcgt tttccagacg gacgtgcagc ccgcgcacgg
    13501 gcatatcgtc gaagataaag cgggtacgca catcggcgcg gttgatggcg gtttgattca
    13561 tgattttctc tgactgattg ttcggatggc ggctatatgg ttgcggtcgg cgcgaaaaca
    13621 agacggacgg cggatgcgct tcccaaatta tcaataaatt atataaaaat caacatatta
    13681 actcaatcta acaagccgtt ttttgccaaa cagccgtttt tttatataca atcaacaaga
    13741 tattttcgac tgatacagca taacatcgca cggcggcacg atgcctcctg cgcggaaaca
    13801 ccgatatgga ttcttttttc aaaccggcag tttgggcggt tttgtggctg atgtttgccg
    13861 tccgccccgc ccttgccgac gagttgacca acctgctcag cagccgcgag cagattctca
    13921 gacagtttgc cgaagacgaa cagcccgttt tacccatcaa ccgagccccc gcccggcggg
    13981 cgggcaatgc cgacgaactc atcggcagcg cgatggggct taacgaacag cccgttttac
    14041 ccgtcaaccg agtccccgcc cggcgggcgg gcaatgccga cgaactcatc ggcaacgcga
    14101 tggggcttaa cgaacagccc gttttacccg tcaaccgagc ccccgcccgg cgggcgggca
    14161 atgccgacga actcatcggc aacgcgatgg ggcttttggg tattgcctac cgctacggcg
    14221 gcacatcgat ttctaccggt tttgactgca gcggcttcat gcagcacatc ttcaaacgcg
    14281 ccatgggcat caacctgccg cgcacgtcgg cagaacaggc gcggatgggt acgccggttg
    14341 cccgaagcga attgcagccc ggggatatgg tgtttttccg cacgctcggc ggcagccgca
    14401 tttcccatgt cggactttat atcggcaaca accgcttcat ccacgcgccg cgcacgggga
    14461 aaaatatcga aatcaccagc ctgagccaca aatattggag cggcaaatac gcgttcgccc
    14521 gccgggtcaa gaaaaacgac ccgtcccgct ttctgaactg atttcccaag gaatacgcaa
    14581 tgagtatgcc cgaaatgccc aaatggtacg acgatgacgg acagatcgtg tcctgtaccg
    14641 aaaaggtcaa agtgatgtcc gaaaatatgg ccgagctgta tcagacggca caagacgcgt
    14701 ttgaagacgc gctgctgatg ggttgcggcg aacgtcagtt gcgcgattac ctgctcgcgc
    14761 tgattgaagg tttggaaaat ccctaccgca aagtctgaac acgccccggt tgctgcggca
    14821 cggtttatcc gtgccgtttt tgcgtttgtg cgcggcttcg gcttttcaga cggcatattt
    14881 gacgttatga ttaaacagtt aacaagattt atcacaacgc cgtcaaaaga cagacacaca
    14941 acatgaacat catccgcgcg ctcctcatca tcctcggctg cctcgccgcc ggcgaaaccg
    15001 ccgttttcct agcaggcatc aaactgcccg acagcatcgt cggcatgggc gtgctgtttg
    15061 cgcttttgca ggcaggttgg gtcaaaacgt cttggctgca acagcttacc gacgcgctga
    15121 tggcgaatct gacgctgttt ctcgtgccgc cctgcgtggc ggtcatcagc tatttggatt
    15181 tgattgccga cgattggttt tcgatactgg tttccgcctc cgccagcact ttgtgcgtac
    15241 tgctggttac aggcaaggtt caccgctgga tacggagcat tatctgatga acgaaatcct
    15301 caggcagccc agcgttctgc ttttcctcac gcttgccgtg tacgcgcttg cgattatcgt
    15361 gcgcacgcgc acgggcaata tcttctgcaa ccccgtactc gtcagcacta tcgtgctgat
    15421 tgcctacctg aaaatcctcg acatcgatta tgcggtgtac cacaacgccg cgcaattcat
    15481 tgatttttgg ctgaaacccg ccgtcatcgt gcttgccgtg ccgctctacc aaaaccgccg
    15541 taaaatcttc aaccagtggc tgcccgtcat cgtttcacag cttgcgggca gcgttacggg
    15601 cattgttacg gggatgtatt ttgccaaatg gctgggcgcg gaacgcgaag tcgtcctctc
    15661 gctcgcgtcc aaatctgtta ccaaccccat cgccattgaa atcacccgct ccatcggcgg
    15721 cattcccgcc attaccgccg ccaccgtcat cattgccggt ctggtcggac agattgccgg
    15781 ttacaaaatg ctgaagaaca cagtcgtcat gccctcgtcc gtgggtatgt cgctcggcac
    15841 ggcttcgcac gcgatgggga ttgccgcctc gctcgaacgc agccgccgca tggcggcata
    15901 cgcgggactg gggctgacgt tcaacggcgt actgaccgcg ctgattgcgc cgctgctcat
    15961 ccccgttttg ggattttgaa cccgtttcag acggcatttc agcccatgct gtctgaacgc
    16021 cgacacactc gcaaggagaa ccgttatggc tgtcaacctg actgaaaaaa ccgccgaaca
    16081 actgcccgac atcgacggca ttgccctcta caccgcccaa gcaggcgtga agaagcccgg
    16141 gcataccgac ctgacactga ttgccgtagc cgccggcagc accgtcggtg cagtcttcac
    16201 gaccaaccgt ttctgtgccg cgcccgtcca catcgccaaa tcgcaccttt tcgacgaaga
    16261 cggcgtgcgc gccctcatca tcaacacggg caacgccaac gcgggtacgg gcgcacaggg
    16321 cagaatcgat gctttggcag tgtgtgccgc cgccgcccgg caaatcggct gcaaaccgaa
    16381 ccaggtgctg cccttctcca ccggcgtgat tctcgaaccg ctgcccgcag acaaaatcat
    16441 cgccgcgctg cccaaaatgc agcctgcctt ctggaacgaa gcggcacgcg ccatcatgac
    16501 caccgacacc gtgcccaaag ccgcctcgcg cgaaggcaag gtcggcgaca aacacaccgt
    16561 ccgcgccacg ggcatcgcca aaggctcggg catgattcat cccaatatgg cgaccatgct
    16621 cggtttcatc gccaccgatg ccaaagtttc ccaacccgtc ctccaactga tgacgcagga
    16681 aatcgccgac gaaaccttca acaccatcac cgttgacggc gacaccagca ccaacgacag
    16741 cttcgtcatc atcgccaccg gcaaaaacag ccaaagcgaa atcgacaaca tcgccgaccc
    16801 gcgttacgcc caactcaaag aattgttgtg cagcctcgcg ctcgaactcg cccaagccat
    16861 cgtccgcgac ggcgaaggtg cgaccaagtt catcaccgtc cgcgtcgaaa acgccaaaac
    16921 ccgcgacgaa gcccgccaag ccgcctacgc cgtggcacgt tcgccgctgg tcaaaaccgc
    16981 ctttttcgcc tccgacccca acctcggcag gctgctcgcc gccatcggtt atgccggcgt
    17041 tgtcgacctc gatactgacc tcgtggaaat gtatctcgac gatattttgg ttgccgaaca
    17101 cggtggacgc gccgcaagct acaccgaagc acaagggcag gcggtgatgt cgaaggccga
    17161 aatcaccgtc cgcatcaagc tgcatcgcgg acaaagtgcc gccaccgtct atacctgcga
    17221 cctgtcgcac ggatacgttt ccatcaacgc cgactaccgt tcctgacccg acacggcttc
    17281 agacggcata cataaaatgc cgtctgaacc gccggacaac atgccatgac ctccacattc
    17341 ccccgccgcc tcgcccgcaa aatccgccaa acccgccgcc tgtcgcgcaa aagcatcgcc
    17401 tttctgttcc ttttggcagg ttcggcactc gtcgccctga ccgcgctgtt ttttgcccat
    17461 cttgccgatt ttgcgctgga actgaacgcc aaactggttc aacaataccc gtggttcgcg
    17521 tgggtcgcgc ttcctttggg tttgccgctt attgcgtggc tcacacgcaa attcgccccc
    17581 ttcaccgccg gcagcggcat cccgcaggtc atcgcctcac tgtcgctgcc ctacggcgca
    17641 cagaaaacgc ggctgatccg cctcgggcag acgctgctga agattccgct gacctttttg
    17701 ggtatgctgt tcggcgtgtc catcggacgc gaaggtccgt ccgtgcaggt cggcgcggca
    17761 gtgatgggcg cgtggggcgc gtggtgcaag aaacacggct tggcattcaa agggatgcag
    17821 gaaaacgatt tgatggcggc gggcgcggcg ggcggtttgg cagccgcgtt caacgcgccg
    17881 ctggcgggcg tgattttcgc cattgaggaa ctcgggcgcg gcatcatgtt gcgctgggag
    17941 aggcaaattc ttttgggcgt gctcgcctcc ggtttcatac aggtcgccat tcagggcaac
    18001 aacccgtatt tttccggctt caacggcggc gtattggaac atatctttct gtgggtcgca
    18061 ctgtccggcc tggtttgcgg cgcggcgggc ggcctgttcg gacgtttgct ctatcgcggt
    18121 gcggcggcgt ttgcaccgcg caagatacgc ggcttcatcc gcaaccgtcc gctgctgctg
    18181 gcggcactga tggggctgct gctcgccctg ctcggcacgt tctaccaagg caaaacctac
    18241 ggcaccggct accacgaagc cgcccaagcc ctgcacggca tctacgaagc ccccttcgga
    18301 ctcgccgccg ccaaatggct cgccaccgta ttcagctatt gggcaggcgt tccgggcggc
    18361 attttcactc cctcgctgac cataggcgcg gttttgggcg agcatatcgc cgccatcgcc
    18421 gacatatcgc agggtgcaaa catcatcgtc ctcatctgca tggcggcatt tctggcgggc
    18481 gcgacacaat ccccgattac ttccgccgtc gtcgtcatgg aaatgacggg cggacaaagc
    18541 ctgctgtttt ggatgctaat tgcctgcatt ttcgcctcgc aggtttcgcg ccagttttcg
    18601 ccgcgtccgt tctaccacgc atcgggaatg cgcttccgcc agcgcgtgct tcaagaaacc
    18661 gccgcccaaa ccggcaatgc gcccgcaaga ccgcaaacag caaacagcaa aacgggaatg
    18721 ccgtctgaaa attaaaacgc ccccgatcaa acgccggcag ccgccttgat ttgaataccg
    18781 ttccgccgcc gcttgaaatt tcagcaacaa tgccgtctga acgacagaat gcggttttca
    18841 gacggcattt ccccatcccg atattgccta aacaaaaccg aagcgtttgc tataattgca
    18901 ctttttaccg cacacgcacg cccatgtttc ccgatttctc ccaaaccctc tccaaagacc
    18961 gccacttcct gcaatccgcc ttcaaaaatc ccaacaaata cggcggcttg tccaaagtcg
    19021 aagaaaaata ccgaaaatcg cacgaaatct ttttgaaacg tttggcagcc ttgcccaaac
    19081 ccgaattcga caacaccctg cccgttcacg aaaaacttga cgaaatcaaa aaaaccgttg
    19141 ccgaacatca ggtaacgatt atttgcggcg aaaccggttc gggcaaaacc acgcagttgc
    19201 ccaagatttg tttggaactc gggcgcgggg tagcgggttt gatcgggcat acccagccgc
    19261 gccgtttggc ggcgcgttcg gtggcagagc ggattgccga agagctgaaa tccgaaatcg
    19321 gcagcgcggt cggctataaa gtacgcttca ccgaccacac ctcgcgcgat gcctgcgtca
    19381 agctgatgac cgacggcatc ctgctggcgg aaacgcagac cgaccgttat ctcgccgcct
    19441 acgacacgat tatcatcgac gaagcgcacg agcgcagcct gaacatcgac ttccttttgg
    19501 gctatttgaa acaactcctg ccgcgccgcc ccgatttgaa agtcatcatc acctcggcaa
    19561 cgatagacgc agaacgcttc tcccgacact tcaacggcgc gcccgtttta gaagtgagcg
    19621 gacggacgta tcccgtcgaa atcctctacc gaccgctgac cggcaaagac gaagacgacg
    19681 cagaagtgga gttgaccgac gcgattgtcg atgcggcgga cgaattagcg cgacacggcg
    19741 aaggcgatat tttggtattc ctgccgggcg agcgcgaaat ccgcgaaact gccgaagcct
    19801 tacgcaaatc tacactgcgc cgcaacgacg aaatccttcc cctgttcgca cgcctgtcgc
    19861 acgccgagca gcacaaaatc ttccaccctt caggcgcgaa acgccgcatc gtattggcaa
    19921 ccaacgtcgc cgaaacctcg cttaccgtgc cgggcatcaa atacgtcatc gacaccggcc
    19981 tcgcgcgcgt caaacgctat tccgcacggg caaaggtgga gcagcttcat gtcgaaaaaa
    20041 tctctcaagc cgccgcccgc caacgctccg gccgctgcgg acgcgtctcc gcaggcgtgt
    20101 gtatcagact gttttcagaa gaagatttca acagccgccc cgaatttacc gacccagaaa
    20161 tcgtccgcag caacctcgcc gccgtcatcc tgcgcatggc atcgctgaac ctgggcgatg
    20221 tggcggcatt cccattttta gaaatgcccg attcgcggta tatcaatgac ggttttcagg
    20281 tattgctgga attgggggcg gtagaggccg tctgaaaaca agtaggatat acacttctac
    20341 ctgacaaaga ccaacaaacg ataaaactac ggcacatcta gatgcccaac ctacaacatt
    20401 gcacacggta aaaacatgaa acacttactc atcgattttg aaaacgtcca gccgcaaaac
    20461 ttagacaaat taccaaccga aaatacccat atttggctat ttataggtgt attacacaaa
    20521 atgttaccta ttagtctggt gcaatcccta ctacgtttcg gcgaacgtgt ccatcttgtc
    20581 cagttacaaa aaacggggaa aaacgcattg gatttttacc tgtcctatta cctcggacaa
    20641 attaccgcca cagaccccaa tgcccaaatc ggcatactct cgcgtgatgg aggatacgat
    20701 gttctggtcg aacatatttt gaaaaaccac caggcgaagg gtatcgtgcg cctagccaat
    20761 atagatgaag tacaacatca gaaaattact accgaaccgc cgtcagcatt gctggaaaac
    20821 actcctcagc ctgaaaccac cctcaaacca cagcaaccat taacttccta tttccaagca
    20881 gccctaactg cactgcgccg ccccgacgct ttccgcccct gccgcctgca taacctgcga
    20941 caaaatctgc gtaagcatat tttgagtgat ttgtttaaag aaaaaaccga tgaagaatgc
    21001 gaaataacca ctgctaacgt tatcaataaa ctcaaagcac aaaacttcat cagcattgat
    21061 gaacaggaaa ccgtttccta ccatctcagt gataatgatt tgttacaaag aatccaacgc
    21121 catattttaa gccaacgtcc caaaacctac gctgattttc aagccgtcgt gcaaaaccga
    21181 gcagatgcac ttcacttaac agtcggtacc aacgacattc aatcctttgc gcgacatttg
    21241 cgcgaccaaa acctgatccg ccaaaacaat gggaaaattg aatatgcacc gtttactgaa
    21301 cctaaaccac agccaacgcc caagcagcct aaaaaaaccg catgggaacc tgatgaaatt
    21361 atttggaaaa aagtgattgc cgcgttatcg ttaaagaacc gtcctaataa aaccaaaact
    21421 ttacgcaata caatccaggc actcacaaaa tccaatgcac aagaaactga caaactgcta
    21481 caacatttac aagataccca agtcctacgt attgacggta ctaaaattgt gtatatcaag
    21541 taggatgggc atttatgcct gacctacaaa accaaaaaca acctaccacc cttaatcaac
    21601 tccacaaacc cttttcagac aacctcgttt tttgaaaaac aatctgtaaa cagatagctg
    21661 ctgaagaata ccgttgccga gccccaaaac ccgtcctgca acttttattg tgaacttccc
    21721 attatgaaaa aatccctttt cgttctcttt ctgtattcgt ccctacttac tgccagcgaa
    21781 attgcttatc gctttgtatt cggaattgaa accttaccgg ctgcaaaaat ggcagaaacg
    21841 tttgcgctga catttgtgat tgctgcgctg tatctgtttg cgcgttataa ggcgacgcgt
    21901 ttgttgattg cggtgttttt cgcgttcagc attattgcca acaatgtgca ttacgcggtt
    21961 tatcaaagtt ggatgacggg catcaattat tggctgatgc tgaaagagat taccgaagtt
    22021 ggcggcgcgg gggcgtcgat gttggataag ttgtggctgc ctgcgttgtg gggcatgttg
    22081 gaagtcatgt tgttttgcag ccttgccaag ttccgccgta agacgcattt ttctgccgat
    22141 atactgtttg ccttcctaat gctgatgatt ttcgtgcgtt cgttcgacac gaaacaagag
    22201 cacggtattt cgcccaaacc gacatacagc cgcatcaaag ccaattattt cagcttcggt
    22261 tattttgtcg gacgcgtgtt gccgtatcag ttgtttgatt taagcaggat tcccgccttt
    22321 aagcagcctg ctccaagcaa aatcgggcag ggcagtgttc aaaatatcgt cctgattatg
    22381 ggcgaaagcg aaagcgcggc gcatttgaag ctgtttggct acggacgcga aacttcgccg
    22441 tttttaaccc ggctgtcgca agccgatttt aagccgattg tgaaacaaag ttattccgca
    22501 ggctttatga ctgcagtgtc cctgcccagt tttttcaatg cgataccgca cgccaacggc
    22561 ttggaacaaa tcagcggcgg cgatactaat atgttccgcc tcgccaaaga gcagggctat
    22621 gagacgtatt tttacagcgc gcaggcggaa aacgagatgg cgattttgaa cttaatcggt
    22681 aagaaatgga tagaccatct gattcagccg acgcagcttg gctacggcaa cggcgacaat
    22741 atgcccgatg agaagctgct gccgctgctc gacaaaatca atttgcagca gggcaggcat
    22801 tttatcgtgt tgcaccaacg cggttcgcac gccccatacg gcgcattgtt gcagcctcaa
    22861 gataaagtat tcggcgaagc cgatattgtg gataagtacg acaacaccat ccacaaaacc
    22921 gaccaaatga ttcaaaccgt attcgagcag ctgcaaaagc agcctgacgg caactggctg
    22981 tttgcctata cctccgatca tggccagtat gttcgccaag atatctacaa tcaaggcacg
    23041 gtgcagcccg acgctatctc gtgccgctgg tgttgtacag cccggataag gccgtgcaac
    23101 aggctgccaa ccaggctttt gcaccttgcg agattgcctt ccatcagcag ctttcaacgt
    23161 tcctgattca cacgttgggc tacgatatgc cggtttcagg ttgtcgcgaa ggctcggtaa
    23221 cgggcaacct gattacgggt gatgcaggca gcttgaacat tcgcgacggc aaggcggaat
    23281 atgtttatcc gcaatgagtg gcgtaaaaac caataaagac aaatttagat gatgtcgggg
    23341 aagatgcccg accgacaaga ctatgcaaaa tatgaaaaac caagtacgcg gatcaggcat
    23401 ggatgcccga tccaacccgg ccaatgtttc agacgacctg caaaacagtt cgggccatat
    23461 cggtgtcaac acgcgttacc gcctgaccaa actcggcgaa caaatggcgc gcctgcccat
    23521 cgacccgaaa atcgcgcgca ttttgctggc ggcgaagaaa cacgactgca tggcggaaat
    23581 attggtgata gcgtccgcgc tgtcgattca agacccgcgc gagcggccgt tggaagcgcg
    23641 cgatgccgcc gccaaggcac acgagcgttt taccgacaag caatccgact tccttgccta
    23701 tctgaacatt tgggacagct tccagcgcga gcgcgacaaa ggtttgtcca acaagcagct
    23761 ggtgcagtgg tgccgtcaat atttcctgtc gcacctgagg atgcgcgagt ggcgcgagct
    23821 gcaccaccag cttgcccaaa ccgcgattga aatgggtttg accacgaaag aagccgcttt
    23881 cagacggcct cccgaaggca ggcagcttac gtcgtctgaa aatgcgggtg accaagactt
    23941 atccgccaag ctcaaacaaa aacaactgga taaaaagcaa caccgcgccc aaatccgcgc
    24001 cgccaaagaa gcgggctacg aacaaatcca ccgcgccctg ctcaccggcc ttatcgccaa
    24061 cgtcggcatg aaatcgcccg acggcaacga ctacaccggc gcgcgcggca gccgcttcca
    24121 ccttttcccc gcctccgccc tgttcaaagc caagcccaaa tgggtgatgg cggcagaatt
    24181 ggttgaaacc acgcgccttt acgcgcgcga cgtcgccgtt atccagcccg aatggataga
    24241 gcaggaagcg ccgcacctcg tccgctatca ttatttcgag ccgcattggg aacaaaaacg
    24301 cggcgaagtc gtcgccagcg aacgcgtgac gctttacggt ctgaccgtat tgccgcgccg
    24361 ccccgtgtct tacggcaaag ttgcccccga agaagcgcgc gaaatcttta tccgcagcgc
    24421 gttggtggcg caggaatgcg atttgaaagc ggattttttt gtccacaaca aaaagctgat
    24481 taaagaaatt accgaactcg aacacaaatc gcgcaagcaa gacgtgctgg tcgatgacga
    24541 agccctgttt gcgttttata acgaacggct gcccgatttt tatacggcgg atgcggtttc
    24601 agacgacctg catcctacaa atccgcagca aactgccccc tcctacgcga gggaagaacg
    24661 gagagagggc aaaacagttg ccgcacaaac caacttctcc gcaaccgcag caaaccctct
    24721 ccctaaccct ctcccacagg agagggagca gagtgccgca gcttcagcgg tttcaaacga
    24781 cctgcatcct gcaaatcccc aacaaaccgc cccctccccc gtgggggagg gtcggggaga
    24841 gggcaaaaca gttgcctctc aaaccaactt ctccgcaacc acagcaaacc ctctccctaa
    24901 ccctctccct aaccctctcc cacaggaggg ggaacagagt gccgcagctt cagcggtttc
    24961 aaacgaccct caaccccaaa agcagccagc accccaaaaa gaccgtctga aacccctccc
    25021 cctcgccgac atccgcacct tccaagtctg gctcaaaacc gccgaacgcg agaacccgcg
    25081 cctgctgttc ctcagccgcg acgatttgat gcaacacgcc gccgcacaca ttaccgaaga
    25141 gcaattcccc aaattctggc aaaccgcaga cggcaagttc aaactttcct accgcttcga
    25201 gccgcaccat ccgctcgacg gcgttaccct caccctaccg ctgaccgtcc tcaaccgcct
    25261 gcacgcgccg tcgctcgaat ggctggtgcc cggtatgttg cgcgaaaaaa tccagctgct
    25321 gattaaagct ctgccgaagc aaatccgccg catttgcgtg cccgtacccg atttcatcac
    25381 ccaattttta agccaaaacc ctgatcgcaa cgcccccatc ctgccccaac ttgcccaagc
    25441 catcgccaaa accgcaggcg acatccgcat actcgagcaa atcaaccaag acgaatgggc
    25501 cgcgttcagg ctgcccgaac actgctattt caacctccgc attatcgacg acggcggaca
    25561 agagcttgcc ggcggccgca aactgcatga attgcaacaa cagctcggcc aagccgccgc
    25621 cgttaccttc cgcgacaaca cccaagaatt cgagcgcgac aacgtgacca catgggacat
    25681 tggcaccctg cccgaatcca tcaaattcgc acgcggcaaa caacagctca ccggctacct
    25741 cggtctgcaa aaagaaaaag acggccgcat cgccctgcgc ctgtgtgaca ccaccgaagc
    25801 tgccgaacag gcacaccgtc aaggcgtaat cgaattgatg aagctgcaat taaaagagca
    25861 ggtaaaagat ctgaacaaag gcattcaagg ctttacccaa gccgccatgc tgctcaaaca
    25921 catcaacgcc gacaccctgt gcgacgacct cacccaagcc gtctgcgacc gcgcctttat
    25981 cggcgaagac gagctgccgc gcaacgaaaa agcctttaaa gagcaaatca aacgcgcccg
    26041 cagccgcctg cctgccgtca aagaagccct cagccgctac ctgcaggaaa ccgcagccgc
    26101 ctacgccgaa ctcaacagca aactcggcaa acacccattg acccacctcc tacgccaacg
    26161 cctgcaaacc ctgctcgccg ccggcttcgc cacccgcacc ccgtgggcac aatggccgcg
    26221 cctccccatc tacctcaaag ccatgaccct gcgcctcgaa aaatacagca gcaaccccgc
    26281 ccgcgacgca gcccgcgaag ccgatatcca agagctggaa caaatgtggc aggaaaaaac
    26341 agacagcctg attaaacaag gtctccccat ttcagacggc ctcgccgcgt ttaaatggat
    26401 gattgaagaa ttgagggtgt cgctgttcgc gcaggaattg aagacaccgt atccggtgtc
    26461 ggtgaagcgg ttgttgaaga tgtgggagga tcttaattaa aggaagatgc cgtctgattt
    26521 tttcagacgg catcttttat ttccctgacc aaccgattta atcgctccct accaatagct
    26581 ttatttttta attcgcactc ccaaacgaca atcactttga aaccgatctt ttccagctcg
    26641 gtttcatttt taatatcacg ttcgcaattt tttgtgattt tttccaacca aaaatccgta
    26701 ttgcttttcg ggatatgtcc tttattacaa gaatgcccgt accaaaaaca gccgtgtata
    26761 aacacgactg ttttatattt cggcaaaacg atatccggtt tgcctgcata gcgtttatcg
    26821 tttttccgat aacgaaaacc ttgggagaaa agaaatttcc ttaccaatat ttccggtttg
    26881 gtttctttgc tatggatttt tgacatcacg aaagaacgtt tggatgtagt gaaaatatcg
    26941 gtcataaatt acttggaaga taccaccttc gatcgttttt ttgtctgttc cacttttctt
    27001 aacaaatacg aaaccaagct tattaaatcc aaagcatcct tatcattaaa aatactagga
    27061 gataaatttg ctcttaactc atgttgtaca ggatttctaa atccagtcca tgttccgcat
    27121 gcaagctgtt caagaccatc ttctaaattt tgttccgcct tcgttttgtt attcgttaat
    27181 agaagtatag aatttttact cccgaaagct tgttcaatca attctcttcc gtctatgcta
    27241 tgaagacctg tttgcttctg aaccttattt tcgaaaactt taactgcctc gattgcagca
    27301 cttaaataat ccttcttttc attgtaaaaa tcattacagg cagtatgcaa atcctgatgc
    27361 aaatgccgcc aatgatagta aggatattct ggaataatac tatgtaaggc agagattact
    27421 tccgcttgct ctttatttgt aagctccgaa tcttccaaac gattcaaaat aacttctact
    27481 ggttcccttt ccttttctgg caatttgttt ttccaatttt cgatatcaac cccgctttca
    27541 cctttcactt cgtcatcttt ttcttttttt cttctttttc tccaatcttg cccgatggct
    27601 cgaacgattt ccccaaggaa aacccgtaac tttgaagttt taggatgctt ccaatccaat
    27661 gatgtcctat ctgtagcaat taaatcttca tcatcattat ctataaaatc aatacttaac
    27721 catcctgtca gataggaata gaaatggctg gattcgctat cagtgaaaaa ctcgggcata
    27781 tttaccattc tgccgttggc aaacaaggta atacctttca tattattctt taaaggtttt
    27841 tccgttgtaa tgaacttacc ttgtattaat ccgctgtatt catactgttc gaattttgaa
    27901 gataacgatg aaatattggt tgctagatcc tggtattccc attcgaattg tggggtaaca
    27961 agatcatatt ttagatttcc atcaatgatt ttgggttccg agccgttcaa gcttactttg
    28021 attttaaaat cctgagccgg aaaatcaaac aagcgggaaa gatgctccac ataattatct
    28081 aacgggtatc cttgtttttt cgtcagttcg gttaaagtta tggttgttcc gttttcggta
    28141 ttgggttcaa cagattcttt ctgaaactcc ggttgataaa tacgctcact ttttttaatc
    28201 tctgcataat ccaaagtaaa agtaacccgt tcgtttcctt ggatagtaga aatttcaatt
    28261 ttgttgccaa gcccgaataa tgccaattta ccaaggcctt ttttacccgt tggaattctt
    28321 ccgcacgggg aggcttgttt ttcttccctt ctgttccgac cgattctcaa ataaaaatca
    28381 ttgatttcat cgaagctcat tcctatacca ttatctttaa taacgatttt atgctccggt
    28441 ttatcgaata acctaacttc cacttccgta gcacatgcat cgtaggcatt cgctatcaac
    28501 tcggcaatcg caggaacagt gtgcgaatac atctttacac ccaaatgttc gattacggtt
    28561 ggctcgaaac tcattttcaa tttttcttca gacatgtttt ctccttttct aacattcgat
    28621 attatcaaca attgccctgc ctattttttc cgcatacatc ggaggaacgg cattaccaat
    28681 caaacgggct atcttgtccc tgctgcccgc tttaaagaca tagttacgag ggaacgattg
    28741 caatgttgca ccttcgcgca gtgataacgc cctatcttct tcaggatggg caaacctccc
    28801 gttggaaata ctaaagaatt tggtcgttat ggtaggtgcg ggcttatccc accatagcct
    28861 accaaacgtg tctttaaaac tattgtcttt tccgataaaa cattccagct gtaattcggg
    28921 aatatgcgca aaagccaaac ggtttcctcc gtttttaggt atcaaagcca atcgtttcaa
    28981 gttgatatca gataatcccg cacagctatg cataaaatcc gtttcgtctt ggtgtcctgc
    29041 aataattttg ggaaagccat tttccattcc caaaacatcg cgtaccgtaa gccgtttgcc
    29101 cgaatacttg actggttcca gcttttcttt ggttattctg tttgcaatta acgtaaatct
    29161 tttacggctt tggggaattc cgtaatcagc cgtattgtga ataccgaaat ggacggtaaa
    29221 tcctttttct tccaataact ttatgaaatt atcaagcctg ctttctttca ttctgctcag
    29281 aattcccggt acgttctcta caacaacata tccgggattg aaatattcta caaaccgctg
    29341 aaactccaaa agcaaactct tggatttttc cgattttctt ttgtctgttt gaataacact
    29401 ccaatattga caaggactac aacctataag aatcaaatca tcatcattct tttttaaccc
    29461 gagttctttt tccaaggttt caggctgcaa ttcaaaaaca tcagcctgta taaatttggc
    29521 atttatattg gcttcatatg tttctttgca gctgggttcg taatctatcc cggctaaaac
    29581 ctgaataccg gcggattgca ttccatagct cattccacct ccgccacaga aaaaatcaac
    29641 cgcctttaac ttactgtttt tcatttctat ttaaataatt agactagtga gaactaactt
    29701 tatataacat ataatttatt gcttatcaaa aataatttga gattttatta aaattcatgc
    29761 atctaaataa gcagaactta atttcctcca aacgagcgga tgtcttcaaa tgcacacttc
    29821 acagaaaggt cgtctgaaac ccattttcag acgacctttt tccacttccc aaaacaagaa
    29881 ttcccacccc ctccccaaac gtcgcccgaa ccagtaaact ccccatattt caacaacttc
    29941 ttggaagcca accatgcccc gtatccaccc tcctcacctg ttcccgcccc atatcgccga
    30001 acgcggcctt ttgtattttc agcagggcaa ggttcgcgat gtccgaaaaa cttccgccgg
    30061 gcgttatcg
//
LOCUS       DAWGKF010000004        27652 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.004, whole genome shotgun sequence.
ACCESSION   DAWGKF010000004 DAWGKF010000000
VERSION     DAWGKF010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 27652)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27652)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27652
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.004"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(18..1271)
                     /locus_tag="WHR07_000107"
     CDS             complement(18..1271)
                     /locus_tag="WHR07_000107"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HEZ2129383.1"
                     /translation="MQTYLVGGAVRDYLLGLPVKDRDWVVVGADAQTMLAQGFQPVGK
                     DFPVFLHPETHEEYALARTERKTAKGYVGFSFHADKDVTLEQDLMRRDLTINAMAQDA
                     DGKIIDPFGGQRDLAAGILRHVSPAFAEDPVRILRTARFAARYRFEIAEETIKLMRQM
                     VENGEADALVAERVWQEFAKGLMEKNPRKMIEVLRECGALKVLLPEVNALFGVPQRAD
                     YHPEIDSGIHTLMTLQRAADMGLSLPERYAALLHDLGKAKTPSDILPRHHGHDLAGVE
                     PVREVNQRLRAPKHCAELAELVCRWHIIFHQVGQLKSQTILNVLKKTDAFRRPERFQT
                     ALNVCIADTQGRLNREHTPYPQRAHWFALLEAANQADSGKIAAECRAQGKAHLIAEQI
                     DRARLAQIAPLQKTFRAAQDKTEKH"
     gene            complement(1343..2971)
                     /locus_tag="WHR07_000108"
     CDS             complement(1343..2971)
                     /locus_tag="WHR07_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HEZ2129384.1"
                     /translation="MISTNGITMQFGAKPLFENVSVKFGEGNRYGLIGANGSGKSTFM
                     KILGGDLEQTAGEVAIENGVRLGKLRQDQFAYEDMRVLDVVMMGHTEMWAAMTERDAI
                     YANPEATEDDYMKAAELEAKFAEYDGYTAEARAAELLSGVGISEDLHNAKMAEVAPGF
                     KLRVLLAQALFSKPDVLLLDEPTNNLDINTIRWLEGVLNQYDSTMIIISHDRHFLNEV
                     CTHMADLDYNTITIYPGNYDDYMLASAQSRERALKDNAKAKEKLQELQEFVARFSANK
                     SKARQATSRLKQADKIKSEMVEVKPSTRQNPYIRFEADEKAKLHRQAVEVEKLAKRFE
                     TQLFKNLNFILEAGQRLAIIGPNGAGKSTLLKLLAGAYNPEYSDGLLPDEGSIKWAEK
                     ASVGYYPQDHENDFDVDMDLSEWMRQWGQDGDDEQVIRGTLGRLLFGSNDVVKKVKVL
                     SGGEKGRMLYGKLLLLKPNVLVMDEPTNHMDMESIESLNMALEKYNGTLIFVSHDRQF
                     VSSLATQIIELDGKGGYEHYLGDYESYLEKKGVA"
     gene            3121..3495
                     /locus_tag="WHR07_000109"
     CDS             3121..3495
                     /locus_tag="WHR07_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase"
                     /protein_id="HEZ2129385.1"
                     /translation="MIILHGIPNCDTVKKAKNRLAGYGLEFEFRDFKKQRPSEAEICS
                     WLEQVPLATLLNKRGTSWRKLDAGTQQKVLSSTAEAVKLMSEMPSLIKRPVLECGGRV
                     YVGFSEETYDGIFNRQALCRQG"
     gene            3550..5088
                     /locus_tag="WHR07_000110"
     CDS             3550..5088
                     /locus_tag="WHR07_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HEZ2129386.1"
                     /translation="MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGD
                     EKISDHSINNAMQNEQADGGSPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIV
                     DDPNFHDANGKFDHALLNRYLSQRHMSEDQFVEEIRDQFALQNLVNLVQNGVLVGDAQ
                     AEQLIRLTQVNRTIRSHTFNPDEFIAQVKVSEADLQKFYNANKKDYLLPKAVKLEYVA
                     LNLKDFADKQTVSETEVKNAFEERVARLPANEAKPSFEQEKAAVENELKMKKAVADFN
                     KAKEKLGDDAFNHPSSLAEAAKNSGLKVETQETWLSRQDAQMSGMPENLINAVFSDDV
                     LKKKHNSEVLTINSETAWVVRAKEVREEKTLPFAEAKDAVRQAYIRTEAAKLAENKAK
                     DVLTQLNGGKAVDVKWSEVSVLGAQQARQSMPPEAYAELLKAKPANGKPAYVRLIGLP
                     APVIVEVQAVTPPDDIAAQLPLAKQALAQQQSANTFDLLIRYFNGKIKQTKGAQSVDN
                     GDGQ"
     gene            5155..5772
                     /gene="recR"
                     /locus_tag="WHR07_000111"
     CDS             5155..5772
                     /gene="recR"
                     /locus_tag="WHR07_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HEZ2129387.1"
                     /translation="MSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEK
                     LVDALQTALKQVYHCAMCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCH
                     DGLYFVLMGQINTALGMDVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSE
                     FFKNLPYKVSRLSQGIPLGGELEYVDAGTLAQAVYERRLIKEGGA"
     gene            complement(5858..6136)
                     /locus_tag="WHR07_000112"
     CDS             complement(5858..6136)
                     /locus_tag="WHR07_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129388.1"
                     /translation="MNIRTAFALCAIALSAAAAAYAKEIKIDANNTPYSEADAQKLAA
                     TAVGMGVKEPISLNGGSDSITVSGSSATQCVFKVGNGGALQIQGLNCK"
     gene            6341..7588
                     /locus_tag="WHR07_000113"
     CDS             6341..7588
                     /locus_tag="WHR07_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HEZ2129389.1"
                     /translation="MFSLEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVL
                     SVMNGFQKEIRGQLLNVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQAL
                     LANAGEIRGVQMRGILPSEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAE
                     VGNKVTVITPEGNVTPAGVVPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLD
                     KEVAGLRLKLADPQNAPALTATLIPEAQRDAVWVRDWTYNNRSYFEAVELEKRMMFII
                     LTLIIAVAAFNLVSSLVMAVTEKQADIAILRTLGLSPGGVMKIFMVQGAFSGFFGTLA
                     GVVCGVLLGWNVGRVVAFFENLLGVHLINSQVYFIDYLPSDVDMGDVALIACISLGLS
                     FVATLYPSWRASKTQPAEALRYE"
     gene            7581..8276
                     /gene="lolD"
                     /locus_tag="WHR07_000114"
     CDS             7581..8276
                     /gene="lolD"
                     /locus_tag="WHR07_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HEZ2129390.1"
                     /translation="MSELILKCEGVGKRYRDGGLDVRVLHGLDLEIRAGESTGIIGSS
                     GSGKSTLLHILGGLDMPSEGRVLLMGEDLRTLSQRQLGILRNRHLGFVYQFHHLLPEF
                     SALENVMMPLLIGKKKREEAAETAMAMLEKVGLKHRSTHRAGELSGGERQRAAIARAL
                     VTQPKCLLADEPTGNLDRANARNVLDMMLELKTELGTGLVVVTHDDELAGRFERVMVM
                     KDGSLHPKQGANA"
     gene            8344..10089
                     /gene="recD"
                     /locus_tag="WHR07_000115"
     CDS             8344..10089
                     /gene="recD"
                     /locus_tag="WHR07_000115"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HEZ2129391.1"
                     /translation="MERQTDEFAQAAARAAIWFLARYAGSGSEVLANCTERLFQALQN
                     GHSFIRLSGGEADALSALAPVVGTSAAPLILEGRRLFLGRMWQLEYDLAAEIKRLAAA
                     DTSAPDAAGARQNLAKWFQGTGSEGQRDAAALALLQPFMVITGGPGTGKTTTVAKLLA
                     LICGEDENLPNIALAAPTGKAAAHMARALHRAINGFDAPEAVRRHLLKLEGQTVHRLL
                     KLRPPKMQAAFDPVYPLPFDVLVIDEASMLDTALMLQLLKAVKTGARVILLGDENQLP
                     SVGIGAVLSVLSQKTVLDGEAHQRLAGFLPEHGFSVSANPPVLAQNTAHLSFSHRFGD
                     NSGIGCLARAAVSGDEGAWALFDRFPDELEHSECSPNARVERLYRAHKAYWQAVKDGN
                     IEAAYAGISDIVVLAAWRQDAEDFNKAYCSHVRRKMNIPEHLAYFAGEPIMIRQNDYA
                     LELFNGDIGLIMEDVGRQGSLAAYFADADGFKKVAVSCLPDFEPAFAMTVHKSQGSEY
                     REVWLLPPSAAPSDEGDDALSGLSKELLYTAITRAREKFVFFGGEETFRQAAATVKTR
                     QTALGSMLERVFSQE"
     gene            complement(10117..11220)
                     /locus_tag="WHR07_000116"
     CDS             complement(10117..11220)
                     /locus_tag="WHR07_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ2129392.1"
                     /translation="MSSFIFPDNGAEWRNESVQKPPKGWHYVRESGADGILKAAYQNI
                     ATVWQGDFHNAKQVLSAMKKRARKPAAVRSDADIAALFHAHRMKQAQQSRILNMLAVE
                     IRPGFVLDNKRAPDIRAALLDVYGEADGKPFFLPLNLLLGFMGAHEWHKKGVAVPQLG
                     GSIHVPFGVFSPLRGEYLDLLAHAPSTGFQTAFDIGTGSGVLAAILAKQGIPSVIGTD
                     TNPKAVACARANIARLGFEKQVEIRETDLFPEGFADLIVCNPPWLPAKPTSAVESALY
                     DPESAMLAAFLRDAPKHLNPDGEIRLIISDLAEHLGLRPADFLEKAFIRAGLRVADMM
                     KTKPKHKKAANPSDPLAFARTRETTFLYRLKKA"
     gene            11471..13921
                     /gene="lon"
                     /locus_tag="WHR07_000117"
     CDS             11471..13921
                     /gene="lon"
                     /locus_tag="WHR07_000117"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HEZ2129393.1"
                     /translation="MTQKEKHFEEYAALATLPLRDVVVYPHMVLPLFVGRPKSIAALE
                     NAITREEPVFLLAQTDAALEEPVAADLYQTGTVAQVLQVLKLPDGTVKVLVEGLYRGR
                     VLTIEDTGGLFVSHIEAVVEEDTGGNTDLEAVRRTLLAQFEQYAKLNKKIPAEIIGSI
                     NGIAENSRLTDTVAAHLQLKLAQRQQILEIPEIGKRMEFLLAQLESELDIMQAEKRIR
                     GRVKRQMEKSQREYYLNEQIKAIHKELGEEDENGELDALEAGIKKAGMSKEAEEKCLS
                     ELKKLKMMPPMSAESTVVRNYIDTLLELPWKKKSRVSKDIAKAGLVLDTDHYGLEKVK
                     ERILEYLAVQKRMDKLKGPILCLVGPPGVGKTSLGESIAKATGRKYVRMALGGVRDES
                     EIRGHRRTYIGSMPGKILQNMAKAGVKNPLFLLDEIDKLGSDFRGDPASALLEVLDPE
                     QNNKFADHYAEVDYDLSDVMFIATSNSLNIPTPLLDRMEIIRLSGYTEDEKINIAMQY
                     LVPKQMKRNGVKEGELAIEESAVRDIIRYYTREAGVRSLDREIAKICRKVVMQITLDE
                     DSKTKKTGKAKPRAVKVNEKNLHDYLGVRRFDYGVAESENRIGQVTGLAWTEVGGELL
                     TVEAAALPGKGVIQCTGQLGDVMKESVSAAWSVVRSRAESVGLAPDFYEKKDIHIHVP
                     EGATPKDGPSAGIAMTLAAVSAFTKIPVRADVAMTGEITLRGEVLPIGGLKEKLLAAL
                     RGGIKHVLIPKDNLKDLEEIPENVKTGLTIHPVKWIDEVLALGLESQPEPWAEHSGAE
                     AAAESASKPKPRSRATKH"
     gene            14103..14372
                     /locus_tag="WHR07_000118"
     CDS             14103..14372
                     /locus_tag="WHR07_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEZ2129394.1"
                     /translation="MNKSELIEAIAQEADISKAAAQKALDATTNAVTTALKQGDTVTL
                     VGFGTFYVGERAERQGRNPKTGEPLTIAAAKTPKFRAGKALKDAL"
     gene            complement(14431..14865)
                     /locus_tag="WHR07_000119"
     CDS             complement(14431..14865)
                     /locus_tag="WHR07_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129395.1"
                     /translation="MTEPKHEMPTEEQVAARKKAKAKIRTIRIWAWVILALLASTALL
                     SQCAMSKPQAKQKIVESCVKNIPFAEKWQNDLRARGLDSNNTRLTVDYCKCMWEQPLD
                     RLSEKQIRSFGKLGAQEQLDLLGGANAFEARDKQCVADLKSE"
     gene            complement(14858..16165)
                     /locus_tag="WHR07_000120"
     CDS             complement(14858..16165)
                     /locus_tag="WHR07_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HEZ2129396.1"
                     /translation="MKPVNIGLLGLGTVGGGTAAVLRDNAEEISRRLGREVRISAVCD
                     LSEEKARQICPSAAFVKDPFELVARKDVDVVVELFGGTGIAKDAVLKAIENGKHIVTA
                     NKKLLAEYGNEIFPLAEEKNVMVQFEAAVAGGIPIIKALREGLAANRIKSIAGIINGT
                     SNFILSEMREKGSAFADVLKEAQALGYAEADPTFDIEGHDAGHKITIMSALAFGTPMN
                     FSACYLEGISKLDSRDIKYAEELGYRIKLLGITRKTGKGIELRVHPTLIPESRLLANV
                     NGVMNAVRVNADMVGETLYYGAGAGALPTASAVVADIIDIARLVEADTAHRVPHLAFQ
                     PAQVQAQTILPMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQT
                     TAEIVILTHSTVEKHIKSAIAAIEALDCVEKPITMIRMESLHD"
     gene            16339..16734
                     /locus_tag="WHR07_000121"
     CDS             16339..16734
                     /locus_tag="WHR07_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129397.1"
                     /translation="MKRQQDKKMLFEENPIDEHFAEYDRRTGEIRLSGRHFNKPVLLH
                     RDSAGLSKWQSLSELTPDNLLSDVKADDYPEILIIGTGAAQEFIHPKIMADFSRIGIG
                     VECMNTDSAFRTLVFLHSEGRRAWAWLQP"
     gene            16811..18733
                     /locus_tag="WHR07_000122"
     CDS             16811..18733
                     /locus_tag="WHR07_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ2129398.1"
                     /translation="MIEIKNLTLQRGLKVLLDKANATVNPGQRVGLIGKNGTGKSSLF
                     ALIKGKITQDGGDVSIPKNWRLASVSQETPDLDISALDYVLQGDAELQAFQTALRQAE
                     AQNDGMKQAEYHAKLEEIDAYTAPARAAKLLNGLGFSQEEHSRPVKSFSGGWRMRLNL
                     AQALICRADLLLLDEPTNHLDLETVLWLENHLASLPCTQIIISHDRDFLNAATTQTIE
                     LSQQKLTQYGGNYDFYQNERAQRLAQQQAAYVKQQAQIKHLQSFIDRFKAKATKAVQA
                     QSRMKALAKLERVAPAHLDSEFSFEFYHPDHLPNPLLKLEHADLGYEGKTVLHDITLS
                     LESGARYGLLGVNGSGKSTFIKALAGKIDLLSGSIVRSEKLNIGYFAQHQLDTIRADQ
                     NPVWHIQQLSPKVREQEIRNFLGGFNFVGDMALQKTEPFSGGEKARLALAMIIWQKPN
                     LLLLDEPTNHLDLDMRHALTLALQSFQGALIIVSHDRSLLEATTDSFLLIDKGRLKNF
                     DGDLNDYRQWRLAQENAAAAPAASAQSQSRKDTKRIEAQIRQEKARRGKPIQQKIDRA
                     EKEMAQLSEIQTACEAFLAQEDAYLEANKEKLQNTLSQLAKVKTQLAQIEEVWLACQE
                     ELERIETEIEKQFAER"
     gene            18720..19133
                     /locus_tag="WHR07_000123"
     CDS             18720..19133
                     /locus_tag="WHR07_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HEZ2129399.1"
                     /translation="MPSDKEARAGCLSLPANNGIIRALSPPFTGINIRLFAALGLLSL
                     SGAAAQASVYHCNSNGKSVYTSAPAGSCADADLPKISSHQGGGYRLKIKKLSQEAKIH
                     IESKKKNKKPAGKKNRQAAKAPKENQKQPTEKKSP"
     gene            19199..19714
                     /locus_tag="WHR07_000124"
     CDS             19199..19714
                     /locus_tag="WHR07_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129400.1"
                     /translation="MKSKLPLILINFSLISSPLGANAAKIYTCTINGETVYTTKPSKS
                     CHSTDLPPIGNYSSERYIPPQTPEPVSSPSNGGQVVKYKAPVKTVSKPAKSNTPPPQQ
                     APSNNSRRSILETELSNERKALVEAQKMLSQARLAKGGNINHQEINALQSNVLDRQQN
                     IQALQRELGRM"
     gene            complement(20644..21747)
                     /locus_tag="WHR07_000125"
     CDS             complement(20644..21747)
                     /locus_tag="WHR07_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEZ2129401.1"
                     /translation="MITLITGVPGSGKTLSVVSDLAKKINNEWKDRKIFIEGIPELTI
                     ETTPIPEGHSINDMHVWLQYPENNGSVVIIDEAQNVFPPRSPAVKAPPLVEWLHVHRH
                     SGIDIILITQMPQRIDKHVRDLVGAHYHIHKTPLGIFMRYFWDYCANNPRSEFANARP
                     EVYKLDKKAFGLYKSAEIHTKVKTPKSRVLYIIPIALVLFALFFYLGYKLLLGLGNKD
                     GTEEGEAKTQTIVSEEQLEQVRGMAYKASGEAGRNIGNQLGSDKENQNLTKEMLEPTI
                     DGHPESKPIYNGVRQVRQMEFPVACVKSSNSCNCYSGQATILKEIDKKTCIDYVDNGM
                     PFNPYKEEQREIKIDTDEQKPLKKQVLVMDAAK"
     gene            complement(21758..22048)
                     /locus_tag="WHR07_000126"
     CDS             complement(21758..22048)
                     /locus_tag="WHR07_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2523 domain-containing protein"
                     /protein_id="HEZ2129402.1"
                     /translation="MPRLIVALFMALVPMLKDLFFKILAGLGASFVSYEALSLSTDAI
                     LKYFQNAYGNIPPDILNMFALAGIPEALNIIFGGFSFSFGIWSSYRVLKFLK"
     gene            complement(22051..23040)
                     /locus_tag="WHR07_000127"
     CDS             complement(22051..23040)
                     /locus_tag="WHR07_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129403.1"
                     /translation="MTVFDISDLNLKDPDQQDADDLGMTLADYKKMIQEDNDYGRIWQ
                     KIQLKKAEQLQKEKEEAVKRKRKRKIFSDYRGHRFKSVKELCYDVYKGLTYGRGWNGS
                     YQHIEVKGVDSGLYENNAELGRCNAVWPDGKVAHTLDYSVLYEDIPEGEKPEEEKKEP
                     EKDHPKPVEKPDSSNPKPSENPNVGTLGGGASPAVGNAPGGGSLGASDGGGSTGAGNG
                     GNNGSTAQGSGKGKGDGEDSEKMPDVPKYGEPDWGSLKSDGRFGSYATATAFSTGGHC
                     INDIRLDMGQFGSHTLQMGFLCDVLKKLRYVFIAMAYLYSAILVFKTVNSLKG"
     gene            complement(23027..23320)
                     /locus_tag="WHR07_000128"
     CDS             complement(23027..23320)
                     /locus_tag="WHR07_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020424404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129404.1"
                     /translation="MKFKRMAVAFVMSAFFVPAFSEDIEIHRVEEGFKKLNMTGKLYE
                     SVSNAPFGTVFPMRSRDGEIQYTMHKLGCFFNTCYFNVNKVPDNLKKRRHDGF"
     gene            complement(23389..23670)
                     /locus_tag="WHR07_000129"
     CDS             complement(23389..23670)
                     /locus_tag="WHR07_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129405.1"
                     /translation="MQCFSKKEQAEDYSVSKIVPVISPDGKLYAPYKSGGNWYFEGYR
                     IDLSFPQCSQESQFAQGAMLASSFLILFVIVWAFKTVGNMIKGSFANDG"
     gene            complement(23701..23928)
                     /locus_tag="WHR07_000130"
     CDS             complement(23701..23928)
                     /locus_tag="WHR07_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129406.1"
                     /translation="MFKSIKTNVRKAGAVLALATLSAPTWADGIEGVANGIVTEINKV
                     VPVVSSVGVALLSVYVLVKAFRLVSGFVAGR"
     gene            complement(24100..24402)
                     /locus_tag="WHR07_000131"
     CDS             complement(24100..24402)
                     /locus_tag="WHR07_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129407.1"
                     /translation="MKMIARVTGMKRSKGITEKGQSYDSTKLFIEIQFPESQDMCGYA
                     SQEFAYGTYENYEKLLASGVKMPFKAEIDFDFVTNGKAVKQIVTNVVPVFEKPKNS"
     gene            complement(24406..24690)
                     /locus_tag="WHR07_000132"
     CDS             complement(24406..24690)
                     /locus_tag="WHR07_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129408.1"
                     /translation="MIRVREKQYPCLVLDDYFQSGLITRRMYFSLDKFHHIPVSGAVI
                     YKDDPIYFRRLEKVLKANAKELDCYAYRVLADGRLFLVDRLITDFFDERK"
     gene            complement(24683..25786)
                     /locus_tag="WHR07_000133"
     CDS             complement(24683..25786)
                     /locus_tag="WHR07_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HEZ2129409.1"
                     /translation="MDAKGNLKVVPLRRGKGDSAFIDTISFTFHESSVAKFFLITREF
                     FPIKGVSDRDVLVRFSDILEWIFGFGISSHQPVGKGRFYESRWQMERDGVLYGQVYIG
                     GQQETILVEMTGKGCAVAEEGWEERLYRFLTADTTYNAKITRCDVAKDFYENEISPDT
                     AWEMYEQGKFDKRGKRPLVGKLGDDWLNPTEKGKTLTIGSKHSSVFCRIYDKAKEQGD
                     TSGVFWCRFEQQYMGRNCYLSLDILLSPGSFWGGAFEICASLQQKGVTEHRCVSAKKR
                     LELSIERSKQVASQQVGRAINMMVFMGMSDYEIVDYLRRKDGAMPHRLNPASFMIKEK
                     RACEYIHDYEKEIEIIKFDEYGMVLDSLGDLND"
     gene            26312..26500
                     /locus_tag="WHR07_000134"
     CDS             26312..26500
                     /locus_tag="WHR07_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129410.1"
                     /translation="MKALRIKEEQEESIRRLAINANKKLIQLGREPLRDSELAHILLN
                     EAIRCAKIDDDGKITIGN"
     gene            26502..26819
                     /locus_tag="WHR07_000135"
     CDS             26502..26819
                     /locus_tag="WHR07_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129411.1"
                     /translation="MKKALKWIAVFIAFSVWSFGIFLYGFNNGTEAGMQCAQIKGNGL
                     CAMSFDGSASKIEFSDLNEKNDKQTLCFQSLWEFNDECEKKESNSIYYIDLPENNPKD
                     IKQ"
     gene            26901..27230
                     /locus_tag="WHR07_000136"
     CDS             26901..27230
                     /locus_tag="WHR07_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129412.1"
                     /translation="MLSQSQWLDAVKGRLRVRSDYALSKRWAVTPSEVSQYRRNRLRF
                     PFAVVLDIADVMDIDPIEIIAGLEYRRCREKDMERVKGAYFKAHCAHFVYPNNPGFFR
                     RKKRFFG"
     gene            complement(27299..27415)
                     /locus_tag="WHR07_000137"
     CDS             complement(27299..27415)
                     /locus_tag="WHR07_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF45 domain-containing protein"
                     /protein_id="HEZ2129413.1"
                     /translation="MTHLLERHRNARFMAHMDNFLPNWQSIKQQLNALELGV"
     gene            27368..>27652
                     /locus_tag="WHR07_000138"
     CDS             27368..>27652
                     /locus_tag="WHR07_000138"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129414.1"
                     /translation="MRHKTGVAMAFEQMGQFVDDDVLSGADTRTAPLGGNTLMCRFLI
                     AFLRISTFRLPIFILSSVFRVPDNQLKHCINIQPFFINEQLKLDFKAFLLH"
BASE COUNT         7041 a         7062 c         6857 g         6692 t
ORIGIN      
        1 tggctgcatt ggacgtttta atgtttttct gttttgtctt gcgccgctcg aaacgttttt
       61 tgcaatgggg cgatttgtgc cagccgcgcc cggtcgattt gttcggcgat aaggtgcgct
      121 tttccctgcg cgcggcattc ggcggcgatt ttgcccgaat ccgcctgatt ggcggcttcg
      181 agcagggcga accagtgtgc gcgttgcggg tagggcgtgt gttcgcggtt cagacggcct
      241 tgcgtgtcgg caatgcagac gttcaatgcc gtctgaaagc gttcgggacg gcggaaggca
      301 tcggtttttt tcaatacgtt cagaatggtt tggcttttaa gctgtccgac ttggtggaaa
      361 ataatgtgcc aacggcaaac caattcggca agctcggcgc aatgtttcgg cgcacgcagc
      421 cgctgattga cttcgcgcac gggttcgaca ccggcgaggt cgtgtccgtg gtggcgcggc
      481 aggatgtcgg acggtgtttt ggctttgccc aagtcgtgca gcagggcggc atagcgttcg
      541 ggcaggctca aacccatatc ggcggcgcgt tgcagcgtca tcagggtatg gatgccgctg
      601 tcgatttcgg gatggtagtc ggcgcgttgc ggcacgccga agagggcatt gacttcgggc
      661 agcaagactt tgagcgcgcc gcattcgcgc aacacttcaa tcattttgcg cggatttttt
      721 tccatcaaac ctttcgcaaa ctcctgccag acgcgttcgg caaccaatgc gtccgcttcg
      781 ccgttttcca ccatctgccg catcagcttt atggtttctt cggcgatttc aaacctgtaa
      841 cgcgcggcaa agcgggcagt acgcaggatg cggacggggt cttcggcgaa ggccggggaa
      901 acgtggcgca aaatgcctgc cgccaaatcc cgttgtccgc cgaaagggtc gataatcttg
      961 ccgtccgcat cttgcgccat cgcgttgatg gtcaggtcgc ggcgcatcaa gtcctgctcc
     1021 agcgtaacgt ctttgtcggc gtggaaactg aaaccgacgt aacctttggc ggttttgcgc
     1081 tcggtgcggg cgagggcgta ttcttcgtgc gtttcgggat ggagaaacac gggaaaatct
     1141 ttgccgaccg gctggaagcc ttgcgccagc atggtttgtg cgtctgcgcc gacgaccacc
     1201 caatcgcggt ctttgacggg caagcccaaa agataatcgc ggacggcgcc gccgacgagg
     1261 taagtctgca tatgcttcct attttaaagt tatcaacaat gccgtctgaa gcggcttcag
     1321 acggcattgt tccaaccggc ggttatgcta cgcctttttt ctccaagtaa ctttcgtaat
     1381 cgcccaagta gtgttcatat ccgcctttgc cgtccagttc gatgatttgg gttgccaggg
     1441 aagaaacgaa ctgacggtcg tgggagacga aaatcagcgt gccgttgtat ttttccagcg
     1501 ccatgttcaa ggattcgatg ctttccatat ccatgtggtt ggtcggttcg tccatgacta
     1561 agacattggg tttcaacagc aacagtttgc cgtaaagcat acggcctttt tcgccgccgg
     1621 agagaacctt cacttttttc acgacatcgt tactgccgaa gagcaaacgc cccaaagtgc
     1681 cgcggatgac ttgttcgtcg tcgccgtcct gcccccattg gcgcatccat tcgctcaaat
     1741 ccatatcgac atcgaagtcg ttttcgtgat cttgcggata gtagccgacg ctggcttttt
     1801 ccgcccattt gatgctgcct tcgtccggca gcagaccgtc tgaatattcg gggttgtacg
     1861 cgccggccaa gagtttcagc agggtggatt tgcccgcgcc gttcgggccg atgatggcga
     1921 ggcgttgtcc cgcttcaagg atgaagttca ggtttttaaa caactgggtt tcaaagcgtt
     1981 tcgccagttt ttcaacttcc acagcctgac ggtgcagctt ggctttttca tcggcttcaa
     2041 aacggatata cgggttttga cgggtagagg gtttgacttc gaccatttcc gatttgattt
     2101 tgtctgcctg cttcagacga ctggttgcct gacgggcttt ggatttgttg gcactgaacc
     2161 gcgccacaaa ttcttgcaat tcctgcaatt tttctttcgc cttggcattg tctttcaggg
     2221 cgcgctcacg cgattgggca gaagcgagca tgtagtcgtc gtagttgccc ggatagatgg
     2281 tgatggtgtt gtagtccaaa tccgccatgt gtgtgcagac ttcgttcaaa aagtggcggt
     2341 cgtggctgat gataatcatc gtggagtcgt attggttcaa cacgccttcc aaccagcgga
     2401 tggtattaat gtccaagtta ttggtcggtt cgtccaagag caatacatcc ggcttggaga
     2461 acagcgcctg cgccagcaat acgcgcagtt tgaagcccgg ggcgacttcc gccattttcg
     2521 cattgtgcaa atcttcggaa atgcccacgc cgctcaacag ttcggcggca cgcgcttcgg
     2581 cggtgtagcc gtcgtattcg gcgaacttgg cttccagttc ggcggctttc atgtagtcgt
     2641 cttcggtggc ttcgggattg gcgtaaatcg catcacgttc ggtcatcgcc gcccacattt
     2701 cggtatgccc catcatcacc acgtccagca cgcgcatgtc ttcgtaggca aactggtctt
     2761 ggcgcaattt acccaaacgc acgccgtttt caatcgccac ttcgccggcc gtctgttcca
     2821 aatcgccgcc gaggattttc atgaaggtgg atttgcctga accgttcgcg ccgatcaggc
     2881 cgtaacggtt gccttctccg aattttacgg atacgttttc aaacagcggc ttcgcgccga
     2941 actgcatggt gatgccgttg gtagaaatca tgattggtaa agcctttatt gaacaagaga
     3001 ttaaattttt cgaattttcg gattgtaaca taaccgcccc gccgtctgaa acagacgggc
     3061 aaattttcag acacttatag taaaatatcc gttttattat ttcagacaaa aggtttccaa
     3121 atgataatcc ttcacggcat tccaaattgc gacacagtca aaaaagccaa aaacaggctt
     3181 gccggatacg gcttggagtt tgaatttcgg gattttaaaa aacagaggcc gtctgaagcg
     3241 gaaatctgct cgtggctgga acaagtgcct ttggcaaccc tgctcaacaa acgcgggacg
     3301 agctggcgca aacttgatgc cggaacacag caaaaagtgc tgtcctcgac ggcggaggcc
     3361 gtcaaactga tgtccgaaat gccgagcctg atcaagcgtc ccgtattgga gtgcggcggc
     3421 agggtttatg tcggcttcag cgaagaaacc tacgacggca tcttcaatcg gcaagccctg
     3481 tgcagacagg gataaaaacc gttacaatac ccgacttgaa tttcccaatc ccatttccaa
     3541 tctgaaaata tgttccattc catcgaaaaa tacagaacgc ccgcccaagt ccttttgggg
     3601 ctgattgcat taaccttcgt cggcttcggg gtcagcacgg tatcccatcc gggtgccgac
     3661 tacatcgtcc aagtgggcga cgaaaaaatc agcgaccact ccatcaacaa cgctatgcaa
     3721 aatgaacagg cggacggcgg cagcccttcg cgcgacgcgg tgttccaatc cctgctgcaa
     3781 cgcgcctacc tgaaacaggg cgcgaagctg atgggcattt cggtttcttc cgaacaaatc
     3841 aagcagatta tcgtggacga tcccaatttc cacgacgcaa acggcaaatt cgaccacgcg
     3901 cttttaaacc gctacctttc ccaacgtcat atgtctgaag accagtttgt cgaagaaatc
     3961 cgcgatcagt ttgccttgca gaatttggta aacctcgtcc aaaacggcgt attggtcggc
     4021 gacgcgcagg cggaacagct gatcaggctg acgcaggtca accgcaccat ccgttcgcac
     4081 actttcaacc ccgacgaatt catcgcccaa gtcaaagtgt ctgaagccga tttgcagaag
     4141 ttttataacg caaacaaaaa agactacctg cttcccaaag cggtcaaatt ggaatatgtc
     4201 gccttgaatc tgaaagactt tgcagacaaa cagaccgtca gcgaaacaga agtgaaaaat
     4261 gcgtttgaag agcgcgtggc gcgtttgccg gcaaatgaag ccaaaccttc tttcgagcag
     4321 gaaaaagccg ccgtagaaaa cgaattgaaa atgaaaaagg cggttgccga cttcaataag
     4381 gcaaaagaaa agctgggcga tgacgcgttc aaccatcctt cctcgcttgc cgaagccgcc
     4441 aaaaacagcg gtttgaaagt cgaaacccaa gaaacttggc tgagcaggca ggatgcgcaa
     4501 atgtccggta tgcccgaaaa cctgatcaat gccgttttca gcgacgacgt attgaagaaa
     4561 aaacacaatt ccgaagtgct gaccatcaac agcgaaaccg cgtgggtcgt ccgcgccaaa
     4621 gaagtccgcg aagagaaaac cctgccgttt gccgaagcca aagacgcggt acgtcaggct
     4681 tatatccgta ccgaagccgc caaacttgcc gaaaacaagg caaaagacgt gcttacccaa
     4741 ctgaacggcg gcaaggctgt tgacgtgaaa tggtcggaag tgtccgtttt gggcgcacag
     4801 caggcaaggc agtccatgcc gcccgaggct tatgcggaac tgctgaaagc aaaaccggca
     4861 aacggcaaac ccgcctacgt caggctgatc ggtctgccgg cacccgtgat tgtcgaagta
     4921 caggctgtaa ccccgccgga tgatatcgcc gcacagcttc cgcttgcaaa acaggctttg
     4981 gcgcaacagc agtctgccaa tactttcgac ttgttgatac gttatttcaa cggcaaaatc
     5041 aaacagacca aaggagcgca atcggtcgac aacggcgacg gtcagtaatt gacacttttg
     5101 ttgacaaaat aacggtcgga atattccggc cgttttccca tacggcggaa tatgatgagc
     5161 cacaaaaaac aagatgcctt ccaaggattg atcgacgcgc tgaaggtttt acccaacgtc
     5221 gggccgaaat cggcacagcg gatagcgtat catttgctcc aacacaagcg caaagaggct
     5281 gaaaaactgg tggatgcctt gcagacggca ttgaagcagg tttaccattg cgcgatgtgc
     5341 aacacgtttt gcgaaggcgg attgtgcgat atttgtgccg atgaaacacg cgacgggcgg
     5401 cggctgatgg tggtgcatat gcctgccgac gtgtcgaata tggaagcggc aaactgccac
     5461 gacgggctgt atttcgtcct gatggggcaa atcaatacgg cattgggaat ggacgtatcc
     5521 gccatcgcat tggacaggct ggcgcaacgg ctgggcggcg gggaagtcga agaaatcatt
     5581 attgcaaccg cttttaccgc agaaggcaat gcgacggcgt atgtcctgtc cgagtttttt
     5641 aaaaacctgc cttacaaagt cagcaggctg tcgcagggca ttcccttggg cggcgaattg
     5701 gaatatgtcg atgcgggaac gctggcgcag gcggtgtacg aacgccgcct gattaaagaa
     5761 ggcggggcat aacgccgcct gattaaagaa ggcggggcat aacgccgcca atgcaaaatg
     5821 ccgtctgaag ccttcagacg gcatttttcc gggcggttta cttgcagttt agcccttgaa
     5881 tctgcaatgc gcctccgttg ccgactttga acacgcactg cgtcgcgctg ctgccggaca
     5941 cggtaatgct gtcgctgccg ccgttcaggc tgataggttc cttaacaccc ataccgactg
     6001 ccgttgccgc cagcttttgc gcgtcggctt cggaataagg cgtgttgttg gcatcgattt
     6061 tgatttcttt ggcgtaggca gccgcagcgg cggataaggc gatggcgcac aaagcaaaag
     6121 cagttcggat attcattgtt ttcctcaaga aacggttttt ctgaaggaaa ggatagggca
     6181 gtttgacgcg ttgtgcaagt tttccgcccg ctctgccgcc ccgtcccccg cactcgggcg
     6241 ttcggacgct gcctgggttt tacggtacaa taaacttttg ccgccgcccc caaaccgccg
     6301 tccggggcgg cacgtttgca gacattttta aggtagcgtt atgttttctc tagaggcttg
     6361 gataggcttg aggtatctca gggcgaaaaa gcgcaacggc tttatgtcgt ttatcacgat
     6421 ggtttcgatt gccggaatcg ccttgggcgt aaccgcgctg attgtcgtct tgtcggttat
     6481 gaacggcttt cagaaagaaa tacgcgggca gctcctgaat gtcgcgccgc acgccgaaat
     6541 cggctatatc gacaatacgg atacggattg gcgcaacctg cttcggttta ccgaaaaccg
     6601 caaaggtatt ttggctgccg cgccctatgt ttccaatcag gctctgctgg caaacgcggg
     6661 cgaaatcagg ggcgtgcaga tgcgcggcat tttgccgtct gaagagcgca aagtggtgga
     6721 atacggcgac aaaatgccgg caggcaaatt tgaagatctg attccgggcg agtttgacat
     6781 tatcctcggt gtcggcttgg cggaggcttt gggggcggaa gtcggcaata aagttaccgt
     6841 catcacgccg gagggcaacg ttacccctgc cggagtcgta ccgaggttga aacagtttac
     6901 cgtggtcggt ctggttaaaa cgggtgttta cgaggttgac aattcattgg cgatgacgca
     6961 tatccaagac gcgcgcgtac tgtaccgctt ggataaggaa gttgcggggc tgcggctgaa
     7021 actcgccgac ccgcaaaacg cccccgcctt gacggcaaca ctgattccgg aggcgcaaag
     7081 ggacgcggtt tgggtgcgcg attggacgta caacaaccgc agctattttg aggcggtcga
     7141 gttggaaaaa cggatgatgt tcatcatcct gacgctgatt atcgccgtgg cggcgttcaa
     7201 ccttgtctct tccttggtga tggcggttac ggaaaagcag gcggacattg cgattttgcg
     7261 gactttgggt ctttcccctg gcggcgtgat gaagattttt atggtgcagg gcgcgttttc
     7321 aggctttttc ggcacgctgg cgggtgtggt ctgcggcgtg cttttgggtt ggaacgtcgg
     7381 cagggtcgtg gcgttttttg aaaacctgct cggtgtccac cttatcaatt cgcaggttta
     7441 ttttatcgac tacctgccca gcgatgtcga tatgggcgac gttgccctga ttgcctgcat
     7501 ttccttggga ctgtctttcg ttgccacgct ctacccgagc tggcgtgcct caaaaaccca
     7561 accggcggag gctttgcgtt atgagtgagt tgattttgaa atgcgaaggc gtgggcaaac
     7621 gctaccgcga cggcggtttg gacgttcggg tgctgcacgg cttggatttg gaaatccgcg
     7681 cgggggaaag caccggcatc atcggttctt cgggcagcgg aaaatcgacg ctgctgcata
     7741 ttctgggcgg gctggatatg ccgtctgaag gcagggtgct gctgatgggc gaggatttgc
     7801 gtacattaag ccagcgacaa ctgggcatcc tgcgcaaccg ccatctcggt ttcgtgtacc
     7861 agttccacca tcttctgcct gaattttcgg cactggaaaa cgtgatgatg ccgcttctga
     7921 tcggcaagaa aaaacgggaa gaggcggcag aaacggcaat ggcgatgctg gaaaaggtcg
     7981 gactgaaaca ccgttcgacg caccgcgcgg gcgaactgtc cggcggcgaa cgccagcgtg
     8041 ccgccattgc gcgcgccttg gttacgcaac caaaatgcct gcttgccgac gaaccgaccg
     8101 gcaacctcga ccgtgcgaac gccaggaatg ttttggatat gatgctggaa ctgaaaacgg
     8161 aattgggaac ggggctggtg gtcgtaacgc acgacgacga actcgccggc cgcttcgagc
     8221 gcgtgatggt catgaaagac ggcagcctgc accccaaaca gggcgcaaac gcctaaacag
     8281 ccgaaacaac accgcgccgt ctgaagcccc acgccttcag acggcatttc gacaaggaat
     8341 acaatggaac ggcagacaga tgaatttgcc caagcggcgg caagggcggc aatctggttt
     8401 ttggcacgct atgcgggttc aggcagcgaa gtgcttgcaa actgcaccga acgcctgttt
     8461 caggcattgc aaaacggtca ttcgtttatc cgtttgagcg gtggcgaggc tgacgcgctg
     8521 tcggcactcg cacccgtggt cggaacatcc gccgcgcctt tgattttgga aggcagaagg
     8581 ctgtttttgg gcaggatgtg gcagttggaa tacgatttgg ctgccgagat aaaacgcttg
     8641 gcggcagccg acacgtccgc ccccgacgcg gcaggcgcgc ggcaaaacct cgcaaaatgg
     8701 tttcaaggca cgggcagcga agggcagcgc gatgccgccg ccttggcact gttgcagcct
     8761 tttatggtga ttaccggcgg acccgggacg ggtaaaacga cgacggttgc caaactgctg
     8821 gcgctgattt gcggtgaaga cgaaaatctt cccaacatcg cgcttgccgc accgacgggc
     8881 aaagcggcgg cacatatggc gcgcgcgctg caccgtgcaa tcaacggttt tgacgcgccg
     8941 gaggccgtcc gccgccattt gctcaaactg gaagggcaaa ccgtccaccg actgctgaag
     9001 ctgcgcccgc ccaaaatgca ggcggcgttc gaccctgttt acccgctgcc gtttgacgta
     9061 ttggttatcg atgaagcctc tatgctggat acggcattga tgctgcaact tttaaaagcg
     9121 gtcaaaaccg gcgcgcgcgt gattctgctg ggggatgaaa accagctccc gtccgtcgga
     9181 atcggggcgg tgctgtccgt tttgtcgcaa aaaaccgttt tggacggaga agcgcaccaa
     9241 aggctggccg gcttccttcc ggaacacggt ttcagcgtca gcgcaaatcc gcccgtgttg
     9301 gcgcaaaaca ccgcccatct gtcgttcagc caccgtttcg gcgacaacag cggcatcggc
     9361 tgccttgccc gtgccgccgt atcgggcgat gagggggcgt gggcattgtt tgaccggttt
     9421 ccggatgaac tggaacattc ggaatgcagt ccgaacgctc gagtcgaaag gttgtaccgg
     9481 gcgcacaaag cctattggca ggcggtaaaa gacggcaata tcgaagccgc atacgcaggc
     9541 atctcggata tcgtggtcct ggcagcttgg cggcaggatg cggaagactt caacaaagcc
     9601 tattgcagcc atgtacgccg caaaatgaac ataccggaac atctggccta tttcgccgga
     9661 gagccgatta tgatcaggca gaacgactac gcgcttgaac tgttcaacgg cgacatcgga
     9721 ctgattatgg aagatgtcgg acggcagggc agccttgccg cctattttgc cgatgcggac
     9781 ggatttaaaa aggtagcggt aagctgcctg cccgatttcg aacccgcatt cgccatgacc
     9841 gtccacaaaa gccaaggttc ggaatatcgg gaagtctggc tgctgccgcc ttccgccgca
     9901 ccttcggacg aaggggacga tgcattgtcc ggattgagta aggagctgtt atataccgcc
     9961 attacccgcg cgagggagaa gttcgtattc ttcggcggag aagaaacctt ccggcaagct
    10021 gccgccactg tcaaaacgcg tcagacggca ttgggcagta tgctcgagcg ggtattttca
    10081 caagaataat ccgcccgaat gccgcgccgc cgccccttat gcctttttca aacggtatag
    10141 gaaagtggtt tcccgggttc gcgcaaaagc aagcggatcg ctcggattcg cggctttttt
    10201 gtgcttcggc ttggttttca tcatatcggc aacacgcaaa cccgcccgga taaatgcctt
    10261 ttccaaaaaa tcggcagggc gcagccccaa atgctctgca aggtcggaaa taatcaggcg
    10321 gatttctccg tcgggattca gatgtttcgg cgcatcccgc aaaaacgcag ccagcatcgc
    10381 agattcgggg tcgtataacg cggattcgac ggcggaagtc ggcttggcgg gaagccaggg
    10441 tggattgcag acaatcagat cggcaaaccc ttcgggaaac agatcggttt cccgtatctc
    10501 aacctgtttt tcaaagccca aacgggcaat attggcacgg gcgcaggcga cggctttcgg
    10561 attggtatcc gtgccgatga cggaaggaat gccctgtttc gccaaaatgg cggcaagcac
    10621 gcccgagccc gtcccgatat cgaatgccgt ctgaaaaccc gttgacggcg catgggcgag
    10681 caggtcgagg tattcgccgc gcaacggcga gaatacgccg aaaggaacgt gtatgctgcc
    10741 gcccagctgc ggaacggcaa cccctttctt atgccactcg tgcgcaccca taaaccccag
    10801 cagcagattg agcggcagga aaaacggttt gccgtccgcc tctccgtaca cgtcgagcag
    10861 ggcggcgcgt atatcgggcg cgcgtttgtt gtccaacaca aaaccggggc ggatttcaac
    10921 ggcaagcata ttcagaatac ggctctgctg cgcctgcttc atacggtggg catggaaaag
    10981 ggcggcgata tccgcatcgg aacggacggc ggcaggtttg cgagccctct tcttcattgc
    11041 agaaagcacc tgtttggcat tgtggaaatc gccctgccag acagttgcaa tattttgata
    11101 ggcagccttc aaaatgccgt ctgcaccgct ttcgcggaca taatgccaac ctttgggcgg
    11161 cttttgcaca ctttcgttgc gccattcggc cccgttatcg ggaaaaataa aagaagacat
    11221 gggatacctg cgtcatgttt tgaaaatagg gcggcagaac cgtaaaccat acggatggta
    11281 cagcaaggag cggcaacaca gaacagtttt ttgttcccgc cttgtctttc caagcccatg
    11341 cagtctgaag ccggaatgtt tcagacggca tcgcatcaaa ctccataaat aaaccacata
    11401 tgcttgaaat aataccttca accccaatgt acgcgaaaat cggcaatctg tcagacacaa
    11461 gagagtacct atgacacaaa aagaaaagca ttttgaggaa tatgccgcct tggcaaccct
    11521 tcctttgcgg gatgtcgtcg tttacccgca tatggttctg ccgctgtttg tcggcaggcc
    11581 gaaatccatc gccgcactgg aaaacgccat tacccgcgag gaaccggttt tcctattggc
    11641 acaaaccgat gcggcgctag aagaaccggt tgccgccgac ctgtatcaga ccggtaccgt
    11701 cgcacaagtc ttacaggtat tgaaactgcc ggacggcacg gtaaaagtat tggtcgaagg
    11761 tctgtatcgc ggacgtgttc tgaccatcga agacacgggc ggtctgttcg tttcccatat
    11821 agaggcggtc gtggaagaag acacgggcgg caataccgac ctcgaagccg tgcgccgcac
    11881 cctgttggcg cagtttgaac aatacgccaa actcaataaa aaaatccccg ccgaaattat
    11941 cggcagcatc aacggcattg ccgaaaacag ccggctaacc gatacggtcg cagcgcattt
    12001 gcagttgaaa ctggcgcaac gccaacagat tttggaaatt cccgaaatcg gcaaacggat
    12061 ggaattcctg ctggcacagc tggaatccga actcgacatt atgcaggccg aaaaacgcat
    12121 acgcggacgc gtcaaacgcc aaatggaaaa atcccagcgc gaatattatc tgaacgaaca
    12181 gattaaagcg atacacaaag aattgggcga agaagacgaa aacggcgaac tggatgcctt
    12241 ggaagcaggc atcaaaaagg cggggatgag caaagaagcg gaagaaaaat gcctgtccga
    12301 actgaaaaaa ctcaaaatga tgccgccgat gtctgccgaa tccaccgtcg tacgcaacta
    12361 catcgacacc ctgctcgaac tgccgtggaa gaaaaaatcc cgcgtcagca aagacatcgc
    12421 caaagccgga ttggtgctgg ataccgacca ctacggcctg gaaaaagtca aagaacggat
    12481 tttggaatac ctcgccgtcc aaaaacgtat ggacaaactc aaaggcccga ttctgtgcct
    12541 ggtcggccct ccaggcgtgg gcaaaacctc tttgggcgaa tccatcgcca aagcaacggg
    12601 gcggaaatat gtccgcatgg ctttgggcgg cgtgcgcgac gaaagcgaaa tccggggaca
    12661 ccgccgcacc tatatcggct ccatgcccgg taagattttg cagaatatgg caaaagccgg
    12721 cgtaaaaaac ccattgttcc tgctcgacga aatcgacaaa ttgggtagcg acttccgggg
    12781 cgatcccgcc agcgcgttgc tcgaagtgct tgatcccgag caaaacaaca agttcgccga
    12841 tcattatgcc gaagtggatt acgatttgag cgatgtgatg tttattgcga cttcaaacag
    12901 cctgaatatc ccgacaccgc tgctcgaccg tatggaaatc atccgtctgt ccggctatac
    12961 cgaagacgaa aaaatcaata tcgcgatgca gtacctcgtg ccgaagcaaa tgaagcgcaa
    13021 cggcgtaaaa gaaggggaat tggcaatcga agaaagcgcg gtgcgcgata ttatccgtta
    13081 ctacacccgc gaggcgggcg tgcgttcgct cgaccgcgag attgccaaaa tctgccgcaa
    13141 ggtggtgatg cagattacct tggacgaaga ctcaaaaacc aaaaaaaccg gaaaagccaa
    13201 gcccagggcg gttaaagtaa atgagaaaaa tctgcacgac tatttgggtg tgcgccgctt
    13261 cgattacggc gttgccgaaa gcgaaaaccg tatcggacaa gtaaccggtt tggcgtggac
    13321 ggaagtcggc ggcgaattgc tgaccgtcga agccgcagca ttgccgggta agggcgtgat
    13381 tcagtgcacc ggccagttgg gcgatgtgat gaaggaatcc gtgtccgcag cgtggtcggt
    13441 tgtccgctcc cgtgcggaat cagtgggttt ggctcctgat ttttacgaga aaaaagacat
    13501 ccacatccac gttcccgaag gcgcgacgcc gaaagacggc cctagtgcgg gtattgcgat
    13561 gaccttggcg gcggtatctg cctttaccaa aatcccggta cgcgccgatg tggcgatgac
    13621 gggcgaaatt accctgcgcg gcgaagtcct gccgattggc ggtctgaagg aaaaactgtt
    13681 ggctgcgctt cgcggcggca tcaaacacgt tttaattcca aaagacaacc tcaaagactt
    13741 ggaagaaatc cctgaaaacg tgaaaaccgg cctgaccatc catccggtca aatggataga
    13801 cgaggtattg gctctgggtt tggaaagcca gcctgagcct tgggcagaac attctggtgc
    13861 ggaagcggcg gcggaatccg cttcaaaacc aaaaccccgc agcagggcaa ccaaacattg
    13921 aaacgcagga aatgtgttgt aaaaatgcgg tttcgtcctg aaagcctgtc aaatagggtg
    13981 attccgtatt ttttgcttga cacggcaatt tcagaattgc tataaagcga aagttgctca
    14041 agcagtacaa accccgagta ttcgggcatt tcatcatttt ttaagacagg aagggactga
    14101 ttgtgaacaa gtctgaattg atcgaagcga ttgctcaaga agccgacatt tccaaagccg
    14161 ccgcacaaaa agctttggat gccactacca atgcagtaac caccgccctg aaacaaggcg
    14221 acaccgttac tttggtcggt ttcggtactt tctacgtggg cgaacgtgcg gaacgccaag
    14281 gccgcaaccc caaaaccggc gagcctctga ccattgccgc cgccaaaacg cctaaattcc
    14341 gcgccggcaa agctttgaaa gacgcactgt aagccgtttt ttatgaaaaa agccgattct
    14401 ttaaagaatc ggctttttta tcggtccaca ttattctgat ttcaaatcgg caacacactg
    14461 cttgtcacgt gcttcaaagg catttgcgcc gccgagcagg tcaagctgtt cttgtgcgcc
    14521 gagtttgccg aaggatctaa tctgtttctc gctcaatctg tccaaaggct gctcccacat
    14581 acatttgcag tagtcgacgg taaggcgggt attgtttgaa tctaaaccgc gggcccgtaa
    14641 atcgttttgc catttttcgg caaacggaat attcttcacg caagactcga caattttctg
    14701 ttttgcctgc ggtttggaca tcgcgcattg ggagagcagg gcggttgaag cgagcaacgc
    14761 caaaatgacc catgcccaaa tgcggatggt gcggattttg gcttttgctt ttttgcgcgc
    14821 ggcaacctgc tcttccgtcg gcatttcgtg tttcggctca gtcatgcagg ctttccatgc
    14881 ggatcatggt aatcggtttt tccacgcaat ccagtgcttc gatggctgcg attgccgact
    14941 tgatgtgttt ttcgaccgtg ctgtgggtca gaatcacgat ttcggcagtg gtctgatcaa
    15001 tcacgccttt ttgaatcagt gcttcgatgg acacgttttc ttgtgccaac agcgcggcga
    15061 tttgccccag cgtgcccggt tcgtctttgg cttggacgcg caggtagtag ctgctggtaa
    15121 tttcgtccat aggcaggatg gtttgcgctt ggacttgcgc gggttggaac gccagatgcg
    15181 gtacgcggtg ggcggtatcg gcttcaacca ggcgggcgat gtcgatgata tcggcaacca
    15241 cggcggaagc ggtcggcaat gcgcccgcgc ccgcgccgta atataaggtt tcgccaacca
    15301 tatcggcgtt gacgcgcacg gcgttcatca cgccgttgac gtttgccaag aggcggcttt
    15361 cgggaatcag ggtagggtgg acgcgcagct cgatgccttt gccggttttg cgggtgatgc
    15421 ccaacagttt gatgcggtag ccaagttctt cggcgtattt gatgtcgcgg ctgtcgagtt
    15481 tgctgatgcc ttcgaggtag caggcggaaa agttcatcgg cgtgccgaat gccagcgcgc
    15541 tcatgatggt gattttatgg cccgcgtcat gtccttcgat gtcgaaggtc gggtcggctt
    15601 cggcatagcc cagtgcctgc gcttctttca gtacatcggc aaacgcgctg cctttttcac
    15661 gcatttcgga gaggatgaag ttgctggtgc cgttaataat gccggcgatg gatttaatcc
    15721 tgtttgccgc caaaccttcg cgcagggctt tgatgattgg gataccgccc gctactgccg
    15781 cttcaaattg caccatgaca tttttttctt ccgccagcgg gaagatttcg ttgccgtatt
    15841 cggcgagcag ttttttgttg gcggtaacga tgtgtttgcc gttttcaatg gctttcaaca
    15901 ccgcatcttt ggcaatgccc gtgccgccga acaattcgac gacgacatcg acgtctttac
    15961 gcgcgaccag ttcgaacgga tctttgacaa aggctgcgga cgggcagatt tggcgggctt
    16021 tttcttcgct caagtcgcat acggcactga tgcgcacttc gcgccccaag cggcgggaaa
    16081 tttcctccgc gttgtcccgc aacacggcag ccgtaccgcc gccgaccgta cccaaaccta
    16141 aaagaccgat gtttactggc ttcattgtgt ctccttgtaa gccgactgaa atgtaaatat
    16201 tgaaagacga aaatatccgc tgccgatata attgtgccgc actttgaatc aaatgccgtc
    16261 tgaaatcagc aggagaggtc agatgaaatc cgctaatcct acatgaattt gtctgatttt
    16321 gcacccctcc tgatacagat gaagcggcaa caggataaaa aaatgttatt tgaagaaaat
    16381 ccgatagacg aacattttgc agagtatgac cgccgcacgg gtgaaatccg gctgtccggc
    16441 agacatttca ataagcctgt gctgctgcat agggattctg ccggcctctc gaaatggcag
    16501 tcattgtcag aactgactcc ggataatctg ttgtctgatg tcaaagcgga tgactatccg
    16561 gaaatattga ttatcgggac gggcgcggct caggagttta tccatcccaa aatcatggcg
    16621 gatttttccc gaatcggaat cggcgtggaa tgtatgaata ccgattcggc attcaggaca
    16681 ttggttttcc tgcactcgga agggcgcagg gcttgggctt ggcttcagcc gtaaatttcc
    16741 cgtttcagac ggcatcggca ctgactttca ggtaaaatac gggcttttcc cgcccgacga
    16801 tgtttccgtt atgattgaaa tcaaaaacct caccctgcaa cgcggtttga aagtcctgct
    16861 cgacaaagcc aacgctaccg tcaatcccgg tcagcgcgtc ggtttgatcg gcaaaaacgg
    16921 aacgggcaaa tcgagcctgt ttgccttaat caagggtaaa atcactcagg acggcggcga
    16981 tgtctcgatt ccgaaaaact ggcggctcgc ttccgtttcc caagaaacgc ccgatttgga
    17041 tatttccgct ttggattacg ttttgcaggg cgatgccgag ttgcaggctt ttcagacggc
    17101 attgaggcag gcggaagcgc aaaatgacgg catgaagcag gcggaatatc atgccaaatt
    17161 ggaagaaatc gacgcttata ccgcgccggc ccgcgcggca aaattgttga acgggctggg
    17221 tttttcgcaa gaagaacaca gccgccccgt caaatccttt tccggcggct ggcgtatgcg
    17281 cttgaatctt gcgcaagccc tgatttgccg cgccgatttg ctcttgcttg acgaaccgac
    17341 caaccacttg gatttagaaa ccgtcttgtg gctggaaaac caccttgcct ctttaccctg
    17401 cacgcaaatc atcatttccc acgaccgcga ttttctcaac gcggcaacta cccaaaccat
    17461 tgaattatcg cagcaaaaac tcacgcaata cggcggcaat tacgattttt accaaaacga
    17521 acgcgcgcag cgtctcgcgc aacaacaagc tgcctatgtc aaacagcagg cgcaaatcaa
    17581 acatctgcaa tcctttatcg accgcttcaa agccaaagcc accaaagccg ttcaagcgca
    17641 aagccgcatg aaggctttgg caaagctaga acgcgttgcg cccgcgcatc tggacagcga
    17701 gttttccttt gagttttacc atcccgacca tctgcccaat cctttgttaa agctagaaca
    17761 cgctgatttg ggttacgaag gcaaaaccgt tctgcatgac attaccctgt cgctggaaag
    17821 cggcgcacgc tacgggctat tgggtgtcaa cggcagcggt aaatctacct ttatcaaagc
    17881 cttggcgggc aaaatcgatt tgctttccgg cagcatcgtc cgttccgaaa aactcaatat
    17941 cggctatttt gcccaacacc aactcgacac catccgcgcc gaccaaaacc ctgtttggca
    18001 tattcagcag ctttctccca aagtacgcga acaagaaatc cgaaatttcc tcggcggctt
    18061 caattttgtt ggcgatatgg cgttacagaa aaccgaacct ttttccggcg gagaaaaagc
    18121 ccgccttgcc cttgccatga ttatctggca aaagccgaac ctgttgctgc ttgacgaacc
    18181 aaccaaccat ctggacttgg atatgcgcca cgccctgacg ctcgctctgc aaagtttcca
    18241 aggcgcctta atcatcgtat cgcacgaccg cagcctgctt gaagcgacta ccgacagctt
    18301 cctcctgatc gacaaaggcc gtctgaagaa cttcgacggc gatttgaacg attaccgcca
    18361 atggcgtttg gcacaggaaa acgccgccgc cgcacccgca gcatccgcac aaagccaaag
    18421 ccgcaaagac accaagcgca tcgaagcgca aatccgtcag gaaaaagccc gacgcggcaa
    18481 gccgatacag cagaaaatag accgtgccga aaaagaaatg gcgcagcttt ccgaaattca
    18541 gacggcatgt gaagcatttt tagcacaaga agacgcttac cttgaagcaa acaaagaaaa
    18601 attgcaaaat accttatccc agctggcaaa agtcaaaaca caacttgccc aaatcgaaga
    18661 ggtttggctg gcttgtcaag aagaattgga acggattgaa actgaaatcg agaaacagtt
    18721 tgccgagcga taaagaagcg cgggcagggt gcttatcttt gcctgccaat aacggtataa
    18781 ttcgggcgtt atcaccgcct tttaccggta taaacatcag actttttgcc gccttgggtc
    18841 tcctgtccct ttccggcgcg gcggcgcaag cctccgtata ccattgcaac tcaaatggca
    18901 aaagcgtata tacatcagcc ccagcaggat cgtgcgccga tgcggattta cctaaaatca
    18961 gcagccatca gggaggcgga taccgcctga aaattaaaaa actcagtcaa gaagccaaaa
    19021 tacacataga aagtaaaaag aaaaacaaaa aacctgccgg gaaaaagaac aggcaggctg
    19081 ccaaagcccc gaaagaaaat caaaagcaac caaccgaaaa gaaaagcccg taaaacgcca
    19141 agaaagcatt ataaaaaata ccaaaaaatc aaatgattat ccgaaaatca agcacattat
    19201 gaaatcaaaa ctccccttaa tcctaatcaa cttttccctg atttcaagcc cattgggtgc
    19261 gaatgcggcc aaaatctaca cctgcacaat caacggagaa accgtttaca ccaccaagcc
    19321 gtccaaaagc tgccactcaa ccgatttgcc cccaatcggc aactacagca gcgaacgcta
    19381 tatcccgccc caaacgcccg aaccggtatc atcaccgtca aacggcggac aggttgtcaa
    19441 atataaagcc ccggtcaaaa cagtatccaa gccggcaaaa tccaatacgc cgccgccgca
    19501 acaagcaccc tcaaacaaca gcagacgctc cattctcgaa acagaattga gcaacgaacg
    19561 caaagcattg gttgaagccc aaaaaatgtt atcacaagca cgtctggcaa agggcggcaa
    19621 catcaaccat caagaaataa atgcattaca aagcaatgta ttggacaggc agcaaaatat
    19681 tcaagccctg caaagggaac tggggcgtat gtaaagccgt gttttcaaat cgaccgttcc
    19741 aaggatttga cagaagaaat gatgaaaaag cagcggcata tcctgtgtgt cggctgcctg
    19801 tatattatat tgaaggtcaa cgtatttccc aataccggct ggatggaagc gtcgaaaggg
    19861 atgcagggca tgtcgttcag taccttcgga tacgcggatg ctccgggcta tacattcagc
    19921 cgcattggcc atactttaat tttcctactt ggaaagacca cagggacacg tacaactgtt
    19981 tccgatagtt cgcataatga caagttacgt ctttttctaa gaatattaca ggttttggca
    20041 aaggtttctg ttgcgacccg aatgtcttat ttttttaggc gtatctcagt ccggtatcac
    20101 tccgttagtg ggtttccggt attgaaaaac agttcagaaa aaaggaaaag ggggtattcg
    20161 taaagattgg gcaaaaagcg cgcccaatct ttacaaagct tccccctttt ccttttttct
    20221 gccctatttt cctgcaccta caacccccga acgaagcgat accagactga gacactttaa
    20281 aaaaaacagc cattctagca gttaaccccc ttcactccgc tcaagccatc ctgagagggc
    20341 gggggctgaa accgaaagat ttttattttg aatgaaagga actttatgac atagattcag
    20401 gcgcgagagg cgagaaacct aaaagagcgg tggggacaaa caaaaatccc caagctgaca
    20461 acaaggggat ttttgcattc ctgcctagtt tttaaacttt acaggataaa tcaaaatgca
    20521 gatcactttg cgaattggta aactgctttt gactataacg attgatatac ggcttattct
    20581 agccgttatc atactgataa gtcaataacc cacgactata accgcccgat taagggcggt
    20641 tttctatttt gccgcatcca tcactaatac ttgttttttt aaaggtttct gttcgtcggt
    20701 atctatctta atttctcttt gttcttcttt atacggattg aacggcattc cgttatcgac
    20761 gtaatcgata caggtttttt tgtctatctc ttttaaaatg gttgcctgcc ctgaatagca
    20821 gttgcatgaa tttgacgatt tgacacaggc aacggggaac tccatttgtc tgacctgcct
    20881 gaccccgtta taaatcggtt ttgattcggg atgaccgtct attgtgggtt ctaacatctc
    20941 tttcgtcaaa ttctgatttt ctttgtccga gcccaactga ttgcctatat ttcttccggc
    21001 ttcgcccgat gccttatacg ccatgcccct gacttgttct aattgttcct ccgaaacgat
    21061 tgtttgcgtt ttagcttctc cttcctctgt tccgtcctta ttacccagcc ccaataatag
    21121 cttgtagccc aaataaaaga atagggcgaa caataccaat gcgatgggga tgatatataa
    21181 aacgcggctt ttcggggttt ttaccttagt atggatttcc gctgatttat aaagcccgaa
    21241 cgccttttta tccaacttat agacttcggg gcgtgcattg gcgaactctg accttggatt
    21301 attcgcacaa tagtcccaaa aataacgcat aaaaatgccc agcggggttt tatggatatg
    21361 ataatgcgcc cctaccaaat cgcggacgtg cttatctatg cgttggggca tctgcgttat
    21421 caggataata tctatgcccg aatgcctgtg aacgtgcaac cattcgacaa gaggcggtgc
    21481 ttttacggca ggggagcgcg gcgggaaaac attttgcgct tcgtctatga tgacgacaga
    21541 gccgttattt tcgggatatt gaagccaaac gtgcatatca ttaatggaat gaccttcggg
    21601 aatgggcgtt gtttctatcg ttaattccgg aatgccttca ataaaaatct tcctgtcttt
    21661 ccactcatta tttatctttt tcgccaagtc cgaaacgacg gataaagttt tgcccgaacc
    21721 gggaacgcct gtaattaatg taatcattct ttgcctttca ttttaggaat tttaaaacgc
    21781 ggtaggaaga ccatatgccg aacgagaacg agaaaccgcc gaatatgatg tttaatgctt
    21841 cgggaatgcc tgccagtgca aacatattta aaatatcggg cggtatattc ccataggcgt
    21901 tttgaaaata tttcaaaatg gcatcggttg aaaggcttaa cgcctcatat gagacaaacg
    21961 acgcgccaag acctgcgaga attttaaaaa acaagtcttt aagcatcggc accaatgcca
    22021 tgaacaatgc gacaatcaat cttggcattt ttaacctttc aaactgttta cggttttaaa
    22081 aaccaagatt gcggaataga ggtaagccat ggctataaaa acatatctca gctttttcaa
    22141 tacatcgcac agaaagccca tttgaagcgt gtggctgccg aactgtccca tatccaacct
    22201 tatatcattt atgcaatgcc ctcccgttga gaacgcggtt gcagttgcat aacttccaaa
    22261 ccgtccgtca cttttaaggc ttccccaatc aggctcgcca tacttgggaa catcgggcat
    22321 tttttcactg tcttcgccgt cccctttgcc tttgccgctt ccttgtgccg ttgaaccgtt
    22381 attaccgccg ttccccgcgc ctgtgcttcc tccgccgtcg gatgctccga ggcttccgcc
    22441 acccggcgca tttccgacag cgggggaagc accgcccccc agtgtcccaa cgttcgggtt
    22501 ttcagacggc ttgggattgg acgaatcggg cttttctacg ggcttcggat ggtctttttc
    22561 gggttctttt ttttcttctt cgggcttttc cccttcgggt atatcttcat acaagacgga
    22621 ataatctaaa gtatgggcaa ctttgccatc tggccaaaca gcgttacatc tccccaattc
    22681 cgcattattc tcatacaaac cggaatcaac gccttttact tcgatatgct ggtaactgcc
    22741 gttccaccca cgtccataag tcaaaccctt gtaaacgtca taacagagtt ctttgacaga
    22801 cttgaatcta tgccccctat aatctgaaaa aatcttcctt ttccgcttcc tctttaccgc
    22861 ttcctctttt tctttttgta attgttctgc cttttttaat tggattttct gccaaatcct
    22921 gccgtaatcg ttatcctcct gaatcatctt cttataatcc gccagcgtca tacccaaatc
    22981 atcggcatcc tgttggtcag ggtcttttaa atttaaatct gatatgtcaa aaaccgtcat
    23041 gtcttctttt ttttaaatta tcaggtactt tattcacatt aaaataacat gtattaaaaa
    23101 aacatcctaa cttatgcatt gtgtattgta tttcgccgtc cctacttctc atcgggaaaa
    23161 cagtgccaaa aggagcattt gaaacagatt catacaattt cccagtcata tttaactttt
    23221 taaaaccttc ttcaacacga tgaatctcaa tatcttccga aaaagcagga acaaaaaaag
    23281 cggacatcac aaaagcgacc gccattcttt taaatttcat ctaatacccc ctatttgaaa
    23341 aaataaacca atgaaatcac tgcaaaaaat ccaataagaa aatagaaatc aaccatcatt
    23401 tgcaaaactt cctttaatca tgtttcctac cgttttaaat gcccatacga tcacgaataa
    23461 aatcaggaac gaagaggcaa gcattgcccc ttgtgcaaac tgtgattctt gggagcattg
    23521 cgggaaagac aaatctatcc gatagccttc aaaataccaa tttccgcctg atttatatgg
    23581 cgcgtacagt ttcccatcgg gagatataac gggcacgatt ttggatacag aataatcctc
    23641 tgcctgttct tttttggaaa aacactgcat tcctaccctg tatcccatca tcacaccttt
    23701 ttaacgacca gcaacaaagc cggagacgag gcggaatgct ttaaccagca cataaacgga
    23761 gagcagggcg acgccgacgc ttgaaacgac cggaacaact ttattgattt cggttacgat
    23821 gccgtttgca acgccttcga tgccgtccgc ccaagtcgga gcggaaaggg tagccagtgc
    23881 taaaaccgca cccgctttac gaacatttgt tttgatgctt ttaaacataa aatttccttt
    23941 ttaaaaatta cggttttcgg aggcaaaccg cacagcctta aaatggaaca tcggagtaga
    24001 gttcttcata atcttccgat tcatcgtcaa aatgaaatta ctgaattatc ggcgatccgc
    24061 ctgttgaagc agccggaagc cacgcactta cgtgatattt catgagtttt taggtttctc
    24121 aaaaacaggg acaacgttag ttacaatctg ttttactgct ttgccgttgg tgacgaaatc
    24181 aaaatcaatt tctgccttga acggcatttt tacgcctgaa gcaagcagtt tttcatagtt
    24241 ttcatatgtg ccgtatgcga actcttggct agcatatccg cacatatctt ggctttcagg
    24301 aaactgaatc tcaataaaga gcttcgtaga atcataagat tgaccctttt ccgtaatgcc
    24361 tttgcttcgt ttcataccgg ttacacgtgc aatcatcttc atttgctatt tcctttcgtc
    24421 aaaaaaatcg gttattaacc tatctactaa aaacaacctt ccatctgcta aaaccctata
    24481 cgcataacaa tcaagttctt tagcattagc ttttaaaact ttttccaagc gtctgaaata
    24541 tatagggtca tccttataaa taaccgctcc agatactggt atatgatgga atttgtccaa
    24601 agagaaatac atacgccgag taattaagcc gctttgaaaa taatcatcta aaaccaaaca
    24661 aggatattgc ttttctctta ccctaatcat ttaaatctcc caaactgtct aaaaccattc
    24721 cgtactcatc aaatttaata atttcaattt ctttttcata atcatggata tattcgcaag
    24781 cgcgtttttc tttaatcatg aatgatgcgg gatttaaacg atggggcatt gcaccatctt
    24841 tccggcgcag ataatcaacg atttcgtaat cagacatacc cataaaaacc atcatattta
    24901 tggcgcgccc gacctgttgc gatgcaacct gcttagagcg ttcaatgctc aattccaatc
    24961 tttttttggc acttacacac ctatgctccg tcacgccttt ttgttgcaat gaagcgcaaa
    25021 tctcaaacgc gccgccccaa aaagaccccg gcgataacaa aatatctaaa ctcaaataac
    25081 agtttctgcc catatactgc tgttcaaaac ggcaccaaaa aacgccgctt gtatctccct
    25141 gttcttttgc tttgtcatag atacggcaaa aaaccgaaga atgtttagaa ccgatggtaa
    25201 gggttttgcc tttttcagta gggttaagcc agtcatcccc gagcttgccg acaagcggac
    25261 gtttcccgcg tttatcaaac ttgccctgtt cgtacatttc ccaagcggta tcaggcgaga
    25321 tttcattttc gtaaaagtct tttgcaacgt cgcaacgggt tatttttgcg ttataagtcg
    25381 tatccgccgt taaaaaccta tacaaacgtt cttcccagcc ttcctccgca actgcacaac
    25441 ctttacccgt catctctaca agtatggttt cctgttgtcc accgatgtaa acctgaccgt
    25501 acaaaactcc gtctctttcc atctgccagc gcgactcata aaaccgacct ttgccgacag
    25561 gttgatgcga cgaaattccg aaaccgaata tccattcaag aatgtctgaa aaacgaacta
    25621 atacatccct atctgatacg cctttaatcg gaaaaaattc ccttgttatt aaaaaaaact
    25681 ttgcaacaga actttcatga aacgtaaagc tgattgtgtc tataaatgcg gaatcgcctt
    25741 tgccacgcct taagggaaca acctttaaat ttccctttgc atccataaca accttttcat
    25801 aacgctcgta ctcttgaggt tgaatgcatg aatttgtgtc tcttgaaaat tccatgtttt
    25861 agattcccgt cgcccttcga ttttcgaccc cccctgttag ataagggggg gcataaaaac
    25921 atcagttaca caagccgaac gagcggcgtg attctcgact gcccaaagct aaaaaaacat
    25981 cgcaaacgga caaagaaaca atttcgcccg attcgatata ttggcgggca gaacccaaag
    26041 ccaaaaaaag cgtatcaaat tcggcttctg ttacaaaaat tccgtatgaa taacaattaa
    26101 ccagccattt gccgtttaca aatattattt ctgctcgtcg tttgttcatt tttagaccca
    26161 tttgcacttt tacaacagat tcgagttaat gagttaatgc gttaacattt tgagtaatta
    26221 ttaaccagtt aacttgttaa gtcaatcaca aattacttgt taacactgct tgtaatgttt
    26281 taaatttgaa atatgaaagg aaattgaaaa aatgaaggca ctacgaatca aagaagagca
    26341 agaagagagc atcagaaggc ttgccatcaa tgccaacaag aagctcattc agcttggccg
    26401 cgaaccgctt agggacagcg agcttgcaca catactttta aacgaggcaa tccgatgcgc
    26461 caaaatcgac gacgacggaa aaatcactat aggtaactga tatgaaaaaa gccctgaaat
    26521 ggattgccgt ctttatcgct ttttccgttt ggtcattcgg catatttctg tacggattca
    26581 ataacgggac tgaagcagga atgcaatgcg cccaaatcaa aggtaatgga ctttgtgcaa
    26641 tgtcctttga tggttcggct tcaaaaatcg aattttcaga ccttaatgag aaaaatgata
    26701 aacaaaccct ttgctttcaa tcattatggg aatttaacga tgaatgcgaa aaaaaagaat
    26761 ctaattctat atattatata gacctacccg aaaacaatcc caaagacata aaacaataag
    26821 gagcatatgc tcaaatagag agcctttgca aaaatctgta tcattaaatt acaggttttc
    26881 gcaaaggctt tgattttatt atgctttcac aatcccaatg gctggatgcc gtcaaagggc
    26941 ggttacgggt gcgttccgat tacgcgcttt ccaaaagatg ggcggttacg ccgtccgagg
    27001 tgtcccaata tcggcgcaac cggttgcggt ttccttttgc cgtcgtcttg gatattgccg
    27061 acgtgatgga tatagatccg attgaaatta ttgcaggttt ggaatatagg cggtgcaggg
    27121 aaaaggacat ggagcgcgtc aaaggggcgt atttcaaagc ccattgcgcg cattttgtct
    27181 atccgaacaa tccgggcttt ttccgccgta aaaaacggtt tttcggctag ttcgcataat
    27241 gtatattatg ttaaattata tatttgtgca aacggtctgc ttcggattcg tccttgcgtt
    27301 acacccctaa ctccaaggca ttaagctgtt gtttgatgct ttgccagttt gggagaaagt
    27361 tgtccatatg cgccataaaa cgggcgttgc gatggcgttc gagcaaatgg gtcagttcgt
    27421 ggacgacgac gtattaagcg gtgcggacac ccgaaccgcg ccacttggcg gcaacacgct
    27481 gatgtgcagg tttttaatcg ctttcctgcg gatttctaca tttagattgc cgattttcat
    27541 attaagctcc gtattccgcg tgcctgataa tcagctcaaa cactgcatca atatccagcc
    27601 ctttttcatc aatgagcagc ttaagttgga ctttaaggcg tttttgcttc at
//
LOCUS       DAWGKF010000005        26876 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.005, whole genome shotgun sequence.
ACCESSION   DAWGKF010000005 DAWGKF010000000
VERSION     DAWGKF010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 26876)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26876)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26876
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.005"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            1182..2630
                     /gene="gnd"
                     /locus_tag="WHR07_000139"
     CDS             1182..2630
                     /gene="gnd"
                     /locus_tag="WHR07_000139"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019269816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating NADP(+)-dependent
                     phosphogluconate dehydrogenase"
                     /protein_id="HEZ2129415.1"
                     /translation="MKGDIGVIGLAVMGQNLILNMNDCGFKVVAYNRTIGKVDEFLNG
                     AAKGTGIIGAYSLQDLVDKLEKPRKIMMMVRAGSVVDDFIEQLLPLLEKGDIIIDGGN
                     ANYPDTTRRTHYLAEKGILFVGMGVSGGEEGARHGPSIMPGGDERAWEAVKPIFQAIA
                     AKTPQGEPCCDWVGRDGAGHFVKMVHNGIEYGDMQLICEAYQFMKDGLGLSYDEMHRV
                     FAEWNKTELDSYLIEITAAILGYKDEGGEPLVEKILDTAGQKGTGKWTGINALDLGIP
                     LTLISEAVFARCVSSFKEQRVQTGKLFARTVTPVEGGKQEWVEALRQALLASKIISYA
                     QGFMLIREAGESYGWDLDYGNTALLWREGCIIRSAFLSNIRDAYENNPDLVFLGADPY
                     FKNILENCLPAWRKVVAKAVECGIPMPCMASAITFLDGYTTERLPANLLQAQRDYFGA
                     HTYERTDKPRGEFFHTNWTGKGGDTASTTYDI"
     gene            2693..3964
                     /gene="waaA"
                     /locus_tag="WHR07_000140"
     CDS             2693..3964
                     /gene="waaA"
                     /locus_tag="WHR07_000140"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HEZ2129416.1"
                     /translation="MFQWLYDVLWLLAPIWIRRYLDKRSGSAPAYRAHRGERFGKPYP
                     NPVTGAVWIHAVSVGETRAAQPLIRELRQRFPDAPLLMTQMTPTGRETAQVLFPDAQC
                     RYLPYDKKTWVRQFLREHRPMFGVLMETEIWPNLMKECRRAGVPLFLANARLSEKSLN
                     GYLKVRSLIRPAVASLTGCLVQTEADAARLAKLGAASVQVCGNTKYDLMPSEQMKTLA
                     GQFEKRIGDRPVAVCGSTRVYRGEDEAEKLLAAWQQYRGDALLVVVPRHPEHFQTAFE
                     TAKRFGFKVQRRSDGLPVEPDTQVWIGDSMGELYAYYLCADVAFVGGSLVDSGCQNII
                     EPLSCGVPTIFGFSTYNFSEACRHALASGAAVQVESADAWREAVEKTLSYEGGGMQMQ
                     ARVDGFIAQHRGAGARIAEAVREAVCGHRGR"
     gene            4005..4454
                     /locus_tag="WHR07_000141"
     CDS             4005..4454
                     /locus_tag="WHR07_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family copper resistance protein"
                     /protein_id="HEZ2129417.1"
                     /translation="MSIYALAHIVHLYCAIAFVGGVFFEVLVLSVLHTGRVSCEARRE
                     VEKAMSYRAVRVMPFVVGLLFASGVVMAANRYLPILGEPFATSFGTMLTLKILLAFSV
                     LAHFAIAVVKMARSTLTVGWSKYIHAVVFTHMLLIVFLAKAMFYISW"
     gene            4487..5461
                     /locus_tag="WHR07_000142"
     CDS             4487..5461
                     /locus_tag="WHR07_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEZ2129418.1"
                     /translation="MTEYPGIGSPLFYGVFFAAVLVMIALDMFSLKKNGSHKVGVKEA
                     LAWSGLWVAVSCLFAGWLYFELAGNLGYGAAVAKEKVLEFFTGYILEKSLAVDNIFVF
                     LMIFGYFKVAPQFQHRVLLYGVLGALVLRTVMIFVGAALVRQFEWILYLFGAFLLYTG
                     IHMMKPEGDEEEDLANSRLLNAVKKVVPVGTEFHGEKFFTVENGKKIATPLFLVLVMI
                     ELSDVVFAVDSIPAVFAVTTDPFIVLTSNIFAILGLRAMYFLLADVAERFIFLKYGLA
                     FVLGFIGVKMLVMHWVHIPISVSLSVVFGALGASILTSLIYTKKQPDK"
     gene            5530..5605
                     /locus_tag="WHR07_000143"
     tRNA            5530..5605
                     /locus_tag="WHR07_000143"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5563..5565,aa:Lys,seq:ttt)
     gene            5825..7078
                     /gene="murA"
                     /locus_tag="WHR07_000144"
     CDS             5825..7078
                     /gene="murA"
                     /locus_tag="WHR07_000144"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEZ2129419.1"
                     /translation="MDKLKISANGPLNGEITVSGAKNAALPLMCAGLLTSGTLRLKNV
                     PMLADVKTTQKLLQGMGARVLTDNISEFEINGGTVNNTCAPYELVRTMRASILVLGPT
                     LARFGEAQVSLPGGCAIGSRPVDQHLKGLEAMGAEIVIEHGYVKAKGKLKGTRVAMDV
                     VTVGGTENLLMAATLAEGTTVLENCAIEPEVVDLAECLVKMGAKISGIGTSTMIVEGV
                     DELHGCEHSVVPDRIEAGTFLCAVAITGGRVVLRNAAPKTMEVVLDKLVEAGAVIEAG
                     DDWIAIDMRQRPKAVDIRTVVHPGFPTDMQAQFMALNAVAEGSCRVVETIFENRFMHV
                     PELNRMGANITTEGNTAFVQGVERLSGAVVKATDLRASASLVIAGLAARGETVVEQIY
                     HLDRGYENIEKKLGSVGAKIERVSG"
     gene            7159..8337
                     /locus_tag="WHR07_000145"
     CDS             7159..8337
                     /locus_tag="WHR07_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEZ2129420.1"
                     /translation="MAFLKLTEQNVQGKTVLIRADMNVPFKDGKISDDTRIRASLASI
                     QYCMDNGASVIVMTHLGRPTEGEFHPEDDVAPVAAHLGGLLGKNVKVLNDWRENKPAL
                     NAGDVVMLQNVRINKGEKKNDLELGKAYASLCDVFVNDAFGTAHRAQASTEAVAQAAP
                     VACAGVLMAGELDALGKALKQPARPMVAIVAGSKVSTKLTILESLADKVDQLIVGGGI
                     ANTFLLAEGKAIGKSLAEHDLVEESKKIMAKMAAKGGSVPLPTDVVVAKAFTADAEAV
                     VKDIADVAEDDMILDIGPKSAAELADLLKAAGTVVWNGPVGVFEFDQFAGGTKALAEA
                     IAQSKAFSIAGGGDTLAAIAKFGVTDQIGYISTGGGAFLEFLEGKELPAVAALEKRGA
                     "
     gene            complement(8404..8652)
                     /locus_tag="WHR07_000146"
     CDS             complement(8404..8652)
                     /locus_tag="WHR07_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HEZ2129421.1"
                     /translation="MLTSEQVKAMIEGVAKCEHIEVEGDGHHFFAVIVSSEFEGKARL
                     ARHRLIKDGLKAQLESNELHALSISVAATPAEWAAKAQ"
     gene            complement(8743..9660)
                     /gene="ftsX"
                     /locus_tag="WHR07_000147"
     CDS             complement(8743..9660)
                     /gene="ftsX"
                     /locus_tag="WHR07_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HEZ2129422.1"
                     /translation="MSIIHYASLHIESARTALKELLRQPFGTLLTLLMLAVAMTLPLF
                     MYLGIQSGQSVLGKLNESPQITVYMETAAAQSDSDTVRSLLARDKRIANVRFIGKEDG
                     LAELQSNLDQNLVSMLDGNPLPDAFIVTPDPATTPAQMQAIYRDITKLPMVESASMDT
                     EWVQTLYQINEFIRKILWFLSLTLGMAFVLVAHNTIRLQILSRKEEIEITKLLGAPAS
                     FIRRPFLYQAMWQSILSAAVSLGLCGWLLSTVRPLVDAIFKPYGLNIGWRFFYPEEIA
                     LVFGFVIALGVFGAWLATTQHLLGFKAKK"
     gene            complement(9657..10307)
                     /gene="ftsE"
                     /locus_tag="WHR07_000148"
     CDS             complement(9657..10307)
                     /gene="ftsE"
                     /locus_tag="WHR07_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HEZ2129423.1"
                     /translation="MIRFEQVSKTYPGGFEALKNVSFQINKGEMIFIAGHSGSGKSTV
                     LKLISGITKPSRGKVHFNNQDLGTLTDNQIGFMRQHIGIVFQDHKILYDRNVLQNVIL
                     PLRIIGYPPRKAEERARIAIEKVGLKGRELDDPVTLSGGEQQRLCIARAVVHQPGLLI
                     ADEPSANLDRAYALDIMELFKTFHEAGTTVIVAAHDETLMADYGHRILRLSKGRLA"
     gene            complement(10501..10983)
                     /locus_tag="WHR07_000149"
     CDS             complement(10501..10983)
                     /locus_tag="WHR07_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEZ2129424.1"
                     /translation="MKYLNLAAIALAATFAAHTASADELAGWKDGTAQSLQSLKAPVR
                     IVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIW
                     RYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTEAVKLAHSKCR
                     "
     gene            11107..11460
                     /gene="arsC"
                     /locus_tag="WHR07_000150"
     CDS             11107..11460
                     /gene="arsC"
                     /locus_tag="WHR07_000150"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271974.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HEZ2129425.1"
                     /translation="MPEIKIFHNPRCSKSRAALSLLEERGIAAEVVKYLDTPPDLSEL
                     KDIFNKLGLASARGMMRVKDDLYKELGLDNPDLDNDALLRAIAEHPALLERPIVLANG
                     KAAVGRPLENIEAIL"
     gene            11457..12113
                     /locus_tag="WHR07_000151"
     CDS             11457..12113
                     /locus_tag="WHR07_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEZ2129426.1"
                     /translation="MNKRLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQ
                     VLPPYVRADAALVLGAAAWDKRPSPVFRERINHAIALYQSRRVGKIVFTGGRTKKGYM
                     TEAEVGRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIDSVVIVSDPYHLA
                     RAAEMAEDLGVRVYMSATPTTRFDAGNKKKIFMLQEGYALSLYRLEKWGSRFLGWLSD
                     "
     gene            12229..13623
                     /locus_tag="WHR07_000152"
     CDS             12229..13623
                     /locus_tag="WHR07_000152"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEZ2129427.1"
                     /translation="MTVKTRFAPSPTGYLHIGGVRTALFSWAFARHHKGEFLLRIEDT
                     DLARSTAESVNIILDGMKWVGLNYDNADNVVYQTRRFDRYKEVIAELLEKGHAYYCYC
                     SKEELEAMREKAEKEGTATYDRRWRPEAGKTLPEIPAGVQPVVRFKTPLDGVTKWADL
                     VKGEISIPNEALDDLIIARADGTPTYNFCVVVDDYDMGVTHVIRGDDHVNNTPKQINI
                     LKAIGANLPEYGHLPMILNEQGKKISKRSGDTVAITDFGAMGILPEAMLNYLARLGWA
                     HGDDEFFTMEQFIEWFDLKDVSPSPSRMDLKKLYWINGEHIKITTNEKLAEMVKPRLA
                     LRDIHETSKPALEDVLALVKDRAQDLNALADECLYFYKKQVPAEADVAKHWDDEASAR
                     MLRFAERLEGLEDWNTEAIHDLFKPFCDEEGIKMGKLGMPLRLAVCGTAKTPSVDAVL
                     ALIGKEEVLKRIRA"
     gene            13644..14039
                     /locus_tag="WHR07_000153"
     CDS             13644..14039
                     /locus_tag="WHR07_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129428.1"
                     /translation="MPSDVGIRLQTAFKRKLKMKKIFYFLMVVFSTSVWAGDAEDNLL
                     SIQSGYRALLQKQNNLDGKIIGMQSDLEDARRRLQAAQADIARLEAEIPAAMAQKARQ
                     AEELRQIGVRLDHAWNAVYGAGGTKASGN"
     gene            14043..14534
                     /locus_tag="WHR07_000154"
     CDS             14043..14534
                     /locus_tag="WHR07_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ2129429.1"
                     /translation="MNSLFVDNTVFITRLKAGHIGRLVQALFEEWHGFEPWSSVDKIH
                     AYYGRCLKDDELPLAFAAVDDSGILLGSATVKRHDMESFPQYEYWLGDVFVLPEYRGK
                     GIGRRLVAHCIGAARSLGIKFLYLYTPDVQIFYESFGWAVVGRHFHNGEWVTVMRLDM
                     DKV"
     gene            complement(14657..17251)
                     /gene="mutS"
                     /locus_tag="WHR07_000155"
     CDS             complement(14657..17251)
                     /gene="mutS"
                     /locus_tag="WHR07_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEZ2129430.1"
                     /translation="MSKSAVSPMMQQYLGIKAQHTDKLVFYRMGDFYEMFFDDAVEAA
                     KLLDITLTTRGQVDGEPVKMAGVPFHAAEQYLARLVKLGKSVAICEQVGEVGAGKGPV
                     ERKVVRIVTPGTLTDSALLEDKETNRIVAVSPDKKYIGLAWASLQSGEFKTKLTTVDK
                     LDDELARLQAAEILLPDSKNAPQLQTASGVTRLNAWQFAADAGEKLLTEYFGCQDLRG
                     FGLDGKEHAVAIGAAGALLNYIRLTQNLMPQHLDGLSLETDSQYIGMDAATRRNLEIT
                     QTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAVAALESQYKPL
                     QCRLKNIADIERIAARIAVGNARPRDLASLRDSLFELAQIDLSANGSSLLETLKAVFP
                     ENLSTAEQLRQAILPEPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERE
                     RTGLSTLKVEFNRVHGFYIELSKTQAEQAPADYQRRQTLKNAERFITPELKAFEDKVL
                     TAQEQALALEKQLFDGVLKNLQTALPQLQKAAKAAAALDVLSTFSALAKERNFVRPEF
                     ADYPVIHIENGRHPVVEQQVRHFTANHTDLDHKHRLMLLIGPNMGGKSTYMRQVALIV
                     LLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSL
                     VLMDEVGRGTSTFDGLALAHAVAEHLLQKNKSFSLFATHYFELTYLPEAHAAAVNMHL
                     SALEQGQDIVFLHQIQPGPAGKSYGIAVAKLAGLPVRALKSAQKHLNGLENQAAANRP
                     QLDIFSTMPSEKGDEPNVGNFVDKAEEKHFEGILAAALEKLDPDSLTPREALSELYRL
                     KDLCKSVS"
     gene            17695..18699
                     /gene="gap"
                     /locus_tag="WHR07_000156"
     CDS             17695..18699
                     /gene="gap"
                     /locus_tag="WHR07_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003766473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEZ2129431.1"
                     /translation="MSIKVAINGFGRIGRLALRQIEKAHDIEVVAVNDLTPAEMLLHL
                     FKYDSTQGRFQGTAELKDDAIVVNGKEIKVFANPNPEELPWGELGVDVVLECTGFFTN
                     KTKAEAHIRAGARKVVISAPSGNDVKTVVYGVNQDILDGSETVISAASCTTNCLAPMA
                     AVLQKEFGVVEGLMTTIHAYTGDQNTLDAPHRKGDLRRARAAALNIVPNSTGAAKAIG
                     LVIPELNGKLDGSAQRVPVATGSLTELVSVLERPVTKEEINAAMKAAASESYGYNEDQ
                     IVSSDVVGIEYGSLFDATQTRVMTVGGKQLVKTVAWYDNEMSYTCQLVRTLEYFAGKI
                     "
     gene            complement(18769..18888)
                     /locus_tag="WHR07_000157"
                     /pseudo
     CDS             complement(18769..18888)
                     /locus_tag="WHR07_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(18957..19637)
                     /gene="tsaA"
                     /locus_tag="WHR07_000158"
     CDS             complement(18957..19637)
                     /gene="tsaA"
                     /locus_tag="WHR07_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HEZ2129432.1"
                     /translation="MTYTITPIGTARSPYKQKFGIARQPGLVSAAEVCIELNPEFTAD
                     SVRGLEDFDYVWISFIFHGVLDEGWAQMVRPPRLGGKQKMGVFATRSPHRPNHLGLSL
                     LKLNRIETGKPVRLYCSGADLLDGTPIVDIKPYIPFVESKPDAASGFVSGKPVELEVV
                     WQENIGAENLSANTKNLISQSIAQDPRPAYQNIPERIYVMNIADYEIRFQIEENRATV
                     IDLSPTPL"
     gene            19752..20387
                     /locus_tag="WHR07_000159"
     CDS             19752..20387
                     /locus_tag="WHR07_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamidase"
                     /protein_id="HEZ2129433.1"
                     /translation="MIVSIDVDAQKTFTPLCPDELPVNEGHLIVEELNAQAALADLRV
                     MTKDAHHMVAKWLVDNPVDMLKPTGLPDADLTWVAHAMVGTRGYELLDGLPSAKEYDY
                     CVWKGVDPELHPYGACFHDIEEKLSTGLIEWLRCQNTDTVIIGGLATDYCVKTTVLQL
                     LKGGNWQVIVNEAACRGIAPDTIETAWQEMSSAGAVILKNAEEIKKYINNQ"
     gene            20425..21393
                     /gene="waaC"
                     /locus_tag="WHR07_000160"
     CDS             20425..21393
                     /gene="waaC"
                     /locus_tag="WHR07_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HEZ2129434.1"
                     /translation="MKILLVRLSSMGDLIHTLPAIEDLARQCPDVELHWLCEAGFTDI
                     ARLHPFVKKIHVMKWRQWRKHLFQAETWREMGHLKQTLRQEAFNFVLDSQGLIKSACF
                     AKMAKSPIYGLDKNSAREGLAALAYAKTYAVPKGKNAVWRNRELFAQVFGYAMPETQV
                     FGLTVPEVGRLKNLAQPYYAALHATSRDSKLWPMENWRSLLQKLNEEQQCNIYLPWGN
                     EDEKTRAKQIADGLPFAIVCDKINLLQAAYLLKYAVGIVGVDTGLLHLANALEKPVVG
                     IYTDTDPIKTGVQVSPIAKNLGNIGQIPTADLVYQTLMDCVAADKG"
     gene            21619..22368
                     /locus_tag="WHR07_000161"
     CDS             21619..22368
                     /locus_tag="WHR07_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HEZ2129435.1"
                     /translation="MKALVAVKRVVDYNVKVRVKADGSDVDIGNVKMSMNPFDEIAVE
                     EAVRLKEAGKVSEIVAVSLGEKKCEETLRTALAMGADRAIHVETDTKLESLAVAKLLK
                     AVADKENPQIFFLGKQAIDDDANQVAQMLAALLNAAQGTFASKVHIECGEVQIVREID
                     GGEETIALKLPAVISADLRLNEPRFVKLPNIMAAKKKPLEKLTPDDLVADISPRLKTV
                     KFAEPKARQAGVKVASVAELVEKLKNEAKVI"
     gene            22379..23314
                     /locus_tag="WHR07_000162"
     CDS             22379..23314
                     /locus_tag="WHR07_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HEZ2129436.1"
                     /translation="MSVLIIVEHDNKQLNPTTLHAVTAAAKLGKIDLLVAGSGASAVV
                     EFAKQVAGVEKVLVADAAHYAEGLAEELAPLVVKLAVDYCYVAATATTFGKNLLPRVA
                     ALLDVPQISDLTEIVDNTTFVRPIYAGNAFETVQADSEKLVLTFRATVFDAVAAQGGN
                     AEVINVEATPAQNLSRFVNRQLSHSDRPELTQAKVIVSGGRALGSAEKFNEVLTPLAD
                     VLGAAIGASRAAVDAEYAPNDAQVGQTGKVVAPQLYFAIGISGAIQHVAGMQDSKVIV
                     AINKDADAPIFNVADYGLVGDLFEIVPQLTEVLKN"
     gene            23377..23988
                     /locus_tag="WHR07_000163"
     CDS             23377..23988
                     /locus_tag="WHR07_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HEZ2129437.1"
                     /translation="MITTYKTITSSTQAEFKDKGSRFIAFTYPIRTLADVKKYLDLLK
                     EEHHKARHWCYAYRLGVDGVQFRANDDGEPSGSAGRPILGQIDSVGITDVLVVVVRYF
                     GGTLLGVPGLIHAYKEATAQALAVAEVVEKNIEKTVWLKCEYPFLNEAIRIAKQYQAD
                     ILERDLQLDCRLTVSLSLVNYEACVAAWKNTRQIEVNTEKPFE"
     gene            complement(24040..24357)
                     /locus_tag="WHR07_000164"
     CDS             complement(24040..24357)
                     /locus_tag="WHR07_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HEZ2129438.1"
                     /translation="MQKRIDEIQSKYREWCHLLPQLEEDIRRWKYVVTLIRDMDNFYT
                     HEYQACHQAIEDGVELDLSTEGEYSIMSEDALWNALGEFHQLAWLYLRSSVDALDKYT
                     QED"
     gene            24515..25786
                     /gene="purD"
                     /locus_tag="WHR07_000165"
     CDS             24515..25786
                     /gene="purD"
                     /locus_tag="WHR07_000165"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HEZ2129439.1"
                     /translation="MKLLVIGNGGREHALAWKLAQSPKVETVFVAPGNAGTAIEPKLQ
                     NIDLTAHQDLIEFCRKENIVFTVVGPEAPLAAGIVDDFRAAGLKIFGPTQYAAQLESS
                     KDFAKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPIVIKADGLAAGKGVIVAMTLD
                     EAHAAIDDMLLDNKMGNAGARVVIEDFLQGEEASFIVMVDGNNVLPMATSQDHKRLLD
                     GDKGLNTGGMGAYSPAPVVTPVVYERAMNEIILPTVAGMKAEGHEFTGFLYAGLMIDQ
                     SGAPYTIEFNCRFGDPETQPIMSRLNSDLSDLVEAAIDGKLDSVTAEWSPQTAVGVVL
                     AAQNYPETPKKGDIISGLDAANQIGKVFHAGTTAKEKGDVLTNGGRVLCVVGLGDNVA
                     QAKAKAYGALEKISFDGMQYRKDIADKAINR"
     gene            25820..26422
                     /locus_tag="WHR07_000166"
     CDS             25820..26422
                     /locus_tag="WHR07_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HEZ2129440.1"
                     /translation="MTDVLQTVFYIMLFPRIIAASAQRKLSVYLKKGGLVAYPTESCY
                     GLGCLPTLAKALGKLAHLKKRPQHKGMIVIGNQFEQLQPLLQMPSENLQDMLRKEWPA
                     PKTFLLSAKSCVLPELRGKQRSKLAVRVPAHVGARRLCQALQTPLVSTSCNRAGKRAC
                     RTEREVRRQFGRDVWIVGGRIGRQKSPSQIIDGETGKRLR"
     gene            complement(26494..>26876)
                     /locus_tag="WHR07_000167"
     CDS             complement(26494..>26876)
                     /locus_tag="WHR07_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ2129441.1"
                     /translation="VFGILKRNGRVYTVVVDNAKSETLLPVIKKKIMPDSIVYTNSLS
                     SCDKLDVSGFIHYRINHSKEFADRQNHINGIENFWNQAKRVLRKYNGIDRKSFPLFLK
                     ECEFRFNFGTPSQQLKILRDWCGI"
BASE COUNT         6472 a         6170 c         7539 g         6695 t
ORIGIN      
        1 ttggttttct gtttttgtgg gaatgacggg atgtaggttc gtaggaatga cgtggtgcag
       61 gtttccgtat ggatggattc gtcattcccg cgcaggcggg aatctagaac gtaaaatcta
      121 aagaaaccgt gctgtaaacg gcagactgat gccgtcattc ccacgaaagt gggaatccag
      181 aacgtaaaat ctaaagaaac cgttttcccg ataagtttcc gtaccgacaa ggctggattc
      241 ccgcctgcgc gggaatgacg gcggagcggt ttctgttgct cccgataaat tcctaaaact
      301 taaattttca tcattccctc aaaaacagaa aaccaaaaac agaaacctaa aatcccgtca
      361 ttcccacgaa agtgggaatc tagaacgtaa aatctcaaga aaccgttttc ccgataagtt
      421 tccgtaccga caaggctgga ttcccgcctg cgcgggaatg acggcagagc ggtttctgtt
      481 ttttccgata aatgccgcaa tctcaaatcc cgtcattccc actttcgtgg gaatgacgga
      541 atgtaggttc gtgggaatga cgcggtacag gtttccgtta cgtatcccca tccgaaagtt
      601 tatttataca caagcaatcc aaagttatct gactgaaata ttgtgagatt tacccgcaaa
      661 tctcattttt tccaccactt atacacaaat tcggatgcgt actctgccaa tatgcagaaa
      721 aaagatattt gtatcgacac attctcattc ctacaagttc caaacacact tccctctcaa
      781 atctccacaa cattcccgtt cttaaaggca tcggcagcca ttcggtaaag aaaagcggaa
      841 tgccatctgc acaacaagca aactgtccac aaaaactatt cttcataaaa aacaatccac
      901 aggtatgcac aaaagggaat ccgccttacc gacacccttt taaaacggaa atcccaatga
      961 tttttaaaat aaaaaaaagt tacccacaga aaatttctcc tatcaatata atcatcgttt
     1021 ttttatttaa tttttatatt ttatttataa gccttcaggg aaacgcacgg taaagcgtaa
     1081 aggcatcttt tcaaaaaatt aaaaagttaa ggattgttaa acaagtgtaa atcaggtaga
     1141 gttgcggtcg ataaattaaa tctataacgg agcttcctgc aatgaaaggc gatattggcg
     1201 taatcggttt ggcggttatg gggcaaaacc tgattttgaa tatgaacgat tgcggattta
     1261 aggttgtcgc ctacaaccga acaatcggta aggtggacga atttttaaac ggcgcggcaa
     1321 aagggacggg cattatcggc gcgtattccc tgcaagactt ggtcgataag ctggaaaaac
     1381 cgagaaaaat catgatgatg gttcgcgcag gttcggtggt tgacgacttt atcgaacaac
     1441 tgcttccgtt gttggaaaaa ggcgacatca ttatcgacgg tggcaatgcc aattaccccg
     1501 acacgacacg gcggacacat taccttgccg aaaaagggat tttgtttgtc ggcatggggg
     1561 tctccggcgg agaggaaggt gcgcggcacg gcccgtctat catgccgggc ggagatgagc
     1621 gcgcatggga agctgttaaa ccgattttcc aggcgattgc tgcgaaaacc cctcaaggtg
     1681 agccgtgttg cgattgggtc ggcagggatg gtgcgggaca tttcgtcaaa atggtgcata
     1741 acggcatcga atacggcgat atgcagttga tttgcgaagc gtaccagttc atgaaagacg
     1801 gtttgggact gtcctacgac gaaatgcacc gcgtgtttgc cgagtggaac aaaaccgagc
     1861 tggattctta tctgattgaa atcacagcgg caattttggg ctataaggac gaaggcggcg
     1921 aaccgctggt cgagaaaatc ctcgatacgg cagggcaaaa aggcacgggc aaatggacgg
     1981 gcatcaatgc tttggatttg ggtattccgt tgacgctgat ttccgaagcg gtattcgccc
     2041 gctgcgtttc gtcgttcaaa gaacagcgcg tgcagaccgg caagctgttc gcccgaaccg
     2101 ttacgcccgt cgaaggcggc aaacaagaat gggttgaggc gttgagacag gccctgcttg
     2161 catccaaaat catttcctac gcacaaggct ttatgctgat ccgcgaagcg ggcgaaagct
     2221 acggctggga tttggactac ggcaacactg cgctgctgtg gcgcgagggg tgcatcattc
     2281 gcagcgcatt cttaagcaat atccgcgacg cgtatgaaaa caatcccgat ttggtgttct
     2341 tgggtgcgga tccgtatttc aaaaatattt tggaaaactg cctgccggcg tggcgcaagg
     2401 tggttgctaa ggcggtcgaa tgcggcatcc ctatgccttg catggcttcg gcgattacgt
     2461 tcttggacgg ctacacgacc gaacgtctgc ctgccaatct cttgcaggca cagcgcgact
     2521 acttcggcgc gcacacttac gaacgcaccg acaaaccgcg cggcgagttt ttccatacca
     2581 actggacggg caagggcgga gataccgctt cgacaaccta cgatatttga ttccgttgcc
     2641 gaaatgccgt ccgaaccgtt cggacggcat ttgttttgca ggaaatagaa agatgttcca
     2701 atggctttat gatgtattgt ggctgcttgc gccgatatgg atacggcgtt atttggacaa
     2761 acgctccgga agtgccccgg catatcgggc gcatcggggc gagcgtttcg gcaagccgta
     2821 tccgaatccc gttaccggcg cggtttggat acacgccgtt tcggtcgggg aaacgcgtgc
     2881 cgcccaacct ttgatacgcg agttgcggca gcgttttccc gatgcgccgc tgctgatgac
     2941 gcagatgacc ccgacgggac gggaaaccgc gcaagttctg tttcccgatg cgcaatgccg
     3001 ctatcttccg tatgacaaaa aaacgtgggt acggcagttt ttgcgcgaac accgcccgat
     3061 gttcggcgta ttgatggaaa cggaaatctg gcccaaccta atgaaggaat gccggcgcgc
     3121 gggtgtgccg ctgtttttgg cgaatgcgcg gctgtcggaa aaatcgttga acggttatct
     3181 gaaagtccgc agcctgatcc gtcctgctgt cgcttcgctg acgggctgtc tggtacagac
     3241 ggaggcggat gcggcgcggt tggcgaaatt gggcgcggca tccgtgcagg tgtgcggcaa
     3301 taccaaatac gacctgatgc cgtcggaaca gatgaaaacg ctggcggggc agtttgaaaa
     3361 acgcatcgga gaccggccgg ttgccgtgtg cggcagcacg cgcgtttatc ggggtgaaga
     3421 cgaggcggag aaactgctgg cggcgtggca acaatatcgc ggcgatgccc tgctggtcgt
     3481 cgtgccgcgc catcccgagc attttcagac ggcatttgaa acggcaaaac gcttcgggtt
     3541 taaggttcag cggcgcagcg acggtttgcc ggtcgaaccc gatacgcagg tgtggatagg
     3601 cgacagtatg ggcgagctgt atgcgtatta cctgtgcgcc gatgttgctt ttgtcggcgg
     3661 cagtctggtc gattcgggct gtcagaacat catcgaaccg ctttcctgcg gcgttccgac
     3721 gatattcggc ttttcgacct acaatttttc cgaagcctgc cggcacgcct tggcatcggg
     3781 tgcggcggtt caagtcgaat cggcggacgc gtggcgggaa gccgttgaaa aaaccttatc
     3841 gtacgagggg ggcggaatgc agatgcaggc gcgcgtggac ggctttatcg cacaacatcg
     3901 cggagcgggc gcgagaatcg ccgaggcggt gcgggaagcg gtatgcggac atcgggggcg
     3961 atagtgatac aatccgcatc cgagttttcc ggttggagta ccgtatgagt atttacgcac
     4021 ttgcacacat cgtccatctg tattgcgcca ttgcctttgt cggcggcgtg ttttttgaag
     4081 tgctggtttt gtccgtcctg catacgggac gggtgtcgtg cgaggcgcgg cgcgaagtgg
     4141 aaaaggcaat gtcttaccgc gccgtcaggg tgatgccgtt tgtggtcgga ctgctgttcg
     4201 ccagcggcgt cgtgatggcg gcaaaccgct accttcctat attgggcgaa ccgtttgcca
     4261 cttccttcgg tacgatgctg acgctgaaaa tcctgttggc gttcagcgtg ttggcgcact
     4321 tcgccatcgc cgtcgtcaaa atggcgcgtt ccacactgac ggtcggctgg tcgaaataca
     4381 tacacgccgt cgtctttacc catatgctgc tgattgtctt tttggcaaaa gcgatgtttt
     4441 atatcagctg gtaacacaac tacatttcaa atcaggagat tgaaccatga cagaatatcc
     4501 cggcatcggg tcgccgttgt tttacggcgt tttttttgcg gcagtgctgg tcatgattgc
     4561 cttggatatg ttttcgctga agaaaaacgg cagccataaa gtcggcgtca aagaagcctt
     4621 ggcatggagc ggcttgtggg ttgccgtatc ctgcctgttc gcgggctggc tgtatttcga
     4681 actcgccggc aatctcggct acggcgcggc agtcgcaaaa gaaaaagtat tggaattctt
     4741 taccggctac attttggaaa aatcgttggc agtcgacaat attttcgtgt tcctgatgat
     4801 attcggctac ttcaaagtcg caccacagtt tcagcaccgc gtgctgctgt acggcgtatt
     4861 gggcgcattg gtattgcgca ctgtcatgat tttcgtcggc gcggcactgg ttcggcagtt
     4921 cgagtggatt ctgtatctgt tcggcgcgtt cctgctctat accggcatac acatgatgaa
     4981 gcccgaaggc gatgaggaag aggatttggc aaacagcagg ctgctgaatg ccgtcaagaa
     5041 agtcgttccg gtcggcacgg aatttcacgg cgagaaattt tttaccgtcg aaaacggcaa
     5101 aaaaatcgcc acgccgctgt ttttggtgct agtcatgatt gaattgagcg atgtcgtgtt
     5161 tgccgtggac agcatccccg ccgtctttgc cgttaccacc gatccgttta tcgtgctgac
     5221 ctccaatatt ttcgccattt tgggtttgcg ggcgatgtat ttcctgctgg cggatgtggc
     5281 ggaacgcttt atcttcctga aatacggctt ggcattcgtg ttgggtttta tcggtgtgaa
     5341 aatgctggta atgcattggg tgcatatccc gatttccgtt tcactgtcgg tcgtgttcgg
     5401 cgcgttgggt gcatcgatac tgacctcgtt aatttatacg aaaaaacagc ctgataaata
     5461 aaatgccgtc tcaacgccga caaaatggtt gacagcatca ggcttgatgt atagaatttc
     5521 gagcttgtcg ggtcgttagc tcagtcggta gagcagcgga cttttaatcc gttggtcgag
     5581 cgttcgaatc gctcacgacc caccagataa aacaaaaaaa gctgagtttt caaaactcgg
     5641 ctttttttgt tttccgacaa tccttgttcg gaaagcgcgg catttcgtca aattctttgg
     5701 tgcggcttcc gtatttttcc cgaaaatccc ttataattcc gcctctgcaa ccttcatcgg
     5761 gtgatgcttt atgcgttgtc ccgagaattg aaatattaca agtacccacc aggaaagaac
     5821 aaacgtggac aaactgaaaa tctccgcaaa cggcccactc aacggggaaa taacggtctc
     5881 gggcgcgaaa aacgcggcat tgccgctgat gtgcgcgggt ttgctgacat cgggtacgtt
     5941 gcgcctgaaa aacgtcccta tgctggcaga tgtgaaaacc acgcaaaagc tgcttcaggg
     6001 gatgggcgcg cgcgtcctga ccgacaatat cagcgaattt gaaattaacg gcggcacggt
     6061 aaacaatacc tgcgcccctt acgaattggt acggacgatg cgcgcctcga ttttggtgct
     6121 gggcccgacg ctggcgcgtt tcggcgaggc gcaagtcagc ctgccgggcg gctgcgccat
     6181 cggttcgcgc cccgtcgatc agcatttgaa gggcttggaa gcgatggggg cggaaatcgt
     6241 catcgaacac ggttacgtca aggccaaagg caaactcaaa ggtacgcgcg tggcgatgga
     6301 tgtcgttacc gtcggcggca cggaaaacct gctgatggcg gcgactctgg cggaaggtac
     6361 gacggttttg gaaaactgcg ccatcgagcc cgaggtggtc gatttggcgg aatgcttggt
     6421 taaaatgggc gcgaaaatca gcggcatcgg aacatcgacc atgatcgtgg aaggtgtgga
     6481 cgagctgcac ggctgcgaac acagcgtcgt ccccgaccgg atcgaggcgg ggacgttcct
     6541 gtgcgcggtg gcgataaccg gtggcagggt ggttttgcgg aatgccgcgc cgaaaacgat
     6601 ggaagtggtg ttggacaaac tggttgaggc aggtgcggtg attgaggcgg gcgacgattg
     6661 gatcgccatc gatatgcggc agcgtccgaa ggcggtggac atccgcacgg tcgtccaccc
     6721 cggcttcccc acggatatgc aggcgcagtt tatggcattg aatgccgtgg cggagggaag
     6781 ctgccgcgtg gtggaaacga tttttgaaaa ccgctttatg cacgtccccg agttgaaccg
     6841 gatgggggcg aacattacaa ccgagggcaa tacggcattt gtgcagggtg tggaacggct
     6901 ttccggcgca gtcgtcaagg cgacggattt gcgtgcgtcc gcaagcctcg ttatcgccgg
     6961 tttggcggcg cgcggcgaaa ccgtggtcga acagatttac cacttggatc gcggttatga
     7021 aaatattgaa aaaaaactcg gcagcgtcgg cgcgaaaatc gagcgcgtat ccggctgaac
     7081 gggttgcgat gccgtctgaa gccttcagac ggcatcaatt gtttctgtat cgcaaacact
     7141 gattgaaaag gactgattat ggcattttta aaactgaccg aacaaaacgt gcagggcaaa
     7201 accgtcctca tccgcgccga tatgaacgtg ccgttcaaag acggcaaaat cagcgacgac
     7261 acccgtatcc gcgcctcgct cgcgtccatc caatactgca tggacaacgg cgcatccgtt
     7321 atcgtgatga cccacttggg ccgcccgacc gaaggcgagt tccaccccga agacgacgtt
     7381 gcgcccgttg ccgcgcattt gggcggcctg ttgggcaaaa acgtgaaagt attgaacgac
     7441 tggcgcgaaa acaaaccggc tttgaacgcg ggcgatgtcg tgatgctgca aaacgtgcgt
     7501 atcaacaaag gcgagaagaa aaacgatttg gaactgggca aagcctacgc ttctttgtgc
     7561 gacgtgttcg tcaatgacgc gttcggcacc gcgcaccgcg cccaagcctc gaccgaagcc
     7621 gtcgcccaag ccgctcccgt tgcctgcgcc ggcgtattga tggcgggcga actcgacgct
     7681 ttgggcaaag ccttgaaaca gcccgcgcgc ccgatggttg ccatcgttgc cggcagcaaa
     7741 gtgtccacca agctgaccat cctcgaatcg ctggcggaca aagtcgacca actcatcgtc
     7801 ggcggcggca ttgccaacac cttcctgttg gcggaaggca aagccatcgg caaatctttg
     7861 gcggaacacg atttggtgga agaatccaaa aaaattatgg caaaaatggc ggccaaaggc
     7921 ggttctgtgc cgctgccgac cgatgtcgtc gttgccaaag cctttaccgc cgatgccgaa
     7981 gcggtcgtga aagacattgc cgacgttgcc gaagacgata tgattttgga catcggcccg
     8041 aaatccgccg ccgagcttgc cgatttgctc aaagctgccg gtacggttgt atggaacggc
     8101 cctgtcggcg tgtttgagtt cgatcaattc gcaggcggca cgaaagctct tgccgaagcc
     8161 attgcccaaa gcaaagcatt ctcgattgca ggcggtggcg acacgctggc ggcgattgct
     8221 aaattcggcg ttaccgacca aatcggctat atttctaccg gcggaggcgc gtttcttgag
     8281 ttcttggaag gtaaagagtt gcctgccgta gccgctttgg aaaaacgcgg cgcgtaagcg
     8341 gtttgatata aaaaatgccg tctgaaacgt tgtgctgttt ctgacggcat ttttgtgtgg
     8401 cgattattgt gctttggctg cccattccgc cggagtggcg gcaaccgaaa tggaaagtgc
     8461 gtgcagttcg ttactttcca gttgggcttt gagtccgtct ttaatcaggc ggtggcgcgc
     8521 gaggcgtgcc ttgccttcaa attctgatga aacgatgacg gcgaaaaaat ggtgtccgtc
     8581 gccttctact tcgatatgtt cgcattttgc cacgccttca atcatggctt ttacttgttc
     8641 cgaggtcagc atggtaggtt ccttgttgga aaaatgcgcc attatactgg caaattgaaa
     8701 tgccgtctga aaacgggttc ggacggcatt tttgacggtg ttttattttt tggctttgaa
     8761 gccgagcagg tgctgggtgg tggcaagcca cgcgccgaat acgcccaacg cgatgacgaa
     8821 gccgaacacc agcgcgattt cttcaggata aaagaaacgc cagccgatat tgagcccgta
     8881 gggtttgaag atggcatcga ccaaggggcg cactgtggaa agcagccaac cgcaaagccc
     8941 caggctgacg gcggcggaaa ggatgctctg ccacattgcc tgataaagga aggggcggcg
     9001 gatgaacgat gcgggcgcgc ccaagagttt ggtgatttcg atttcttctt tgcggctgag
     9061 gatttgcagg cggatggtgt tgtgtgcgac aaggacgaac gccataccca gcgtcaggga
     9121 aagaaaccat aaaattttac ggataaattc gttgatttgg tacagcgttt gcacccattc
     9181 ggtatccata gacgcggatt cgaccatagg cagtttggta atgtcccggt agattgcctg
     9241 catttgcgcg ggcgttgtcg cggggtcggg ggtaacgata aatgcgtcgg gcagcgggtt
     9301 gccgtcgagc atcgaaacca aattttggtc gaggttggac tgtaattccg ccaagccgtc
     9361 ttccttgccg atgaagcgga cgttggcgat ccgtttgtcg cgcgccagca ggctgcggac
     9421 ggtatcgctg tcgctttgtg cggcggcggt ttccatatag acggtgattt gcggcgactc
     9481 gttgagtttg cccaacacgc tttgcccgct ttgaatgccc aaatacataa acagcggcag
     9541 ggtcatcgcg acggcgagca tcaggagggt gagcagcgtg ccgaagggtt ggcgcagaag
     9601 ctctttgagc gcggtgcggg cggattcgat gtgcagcgag gcgtagtgga tgatgctcat
     9661 gcgagtcgtc ctttcgagag gcgcaggatg cggtgtccgt agtccgccat cagggtttcg
     9721 tcatgggcgg caacgatgac ggttgttccc gcttcgtgga aggttttgaa caattccatg
     9781 atgtcgagcg cgtaggcgcg gtcgaggttg gcggagggtt cgtcggcaat cagcaggccg
     9841 ggctggtgaa cgacggcgcg ggcgatgcac aggcgttgtt gttcaccgcc ggagagggtt
     9901 acgggatcgt ccaattctcg tcctttcagg ccgacttttt cgatggcgat gcgggcgcgt
     9961 tcttcggctt tgcgcggcgg atagccgata atccgaagcg gcaggatgac gttttgcagg
    10021 acgttgcggt cgtagaggat tttgtggtct tggaacacga tgccgatgtg ttggcgcata
    10081 aagccgattt ggttgtcggt cagtgtgccg aggtcttggt tgttgaagtg gactttgccc
    10141 ctgcttggtt tggtaatgcc cgaaatcagc ttgaggacgg tggatttgcc tgaaccggag
    10201 tgtcctgcga taaaaatcat ctcgcctttg ttgatttgga agctgacgtt tttcagggct
    10261 tcaaaaccgc cgggataggt tttggaaact tgttcgaaac ggatcatagg aggtcctgta
    10321 aggaagggcg gcatatcgtt tcgggcggtt gcgtccgcag ggatatgccg tctgaacaat
    10381 aggtaagaca gtgccgatta taaagattcc gcctgctttt agatagtgga taagtttggc
    10441 ggatatgaag gtcgggcggg aaaaatgccg tctgaagcgg cttcagacgg catccggcgt
    10501 ttaacggcat tttgaatggg cgagtttgac ggcttcggtc aggctttttt cgttcacttc
    10561 cccggtaatg gtctgcctgt atccgcattt cggtgcttcg acgacggtaa agggcagtac
    10621 gccgacagtg tttccgtagg ttttcataaa gtttcggctg ttcgccccgg tgtaacgcca
    10681 aatcgggtag gaaacaggag tttgtttgag gaagttgccg atattgtcgg atgtgtcgag
    10741 cgcgatgccg accatatcga cgctgccttt tttctgcgct ttgtaccatt tggacatggc
    10801 gggcatctct tttcggcacg ggccgcacca agtcgcccac aggttgacga tgcgtacggg
    10861 ggctttgagc gattgcaggc tttgcgcggt accgtctttc catccggcaa gttcgtctgc
    10921 cgaggcggta tgtgcggcaa atgtggcggc aagggcgatt gcggcaagat tcaagtattt
    10981 catcgttttg tcctttgtat gttgattcgg gtattgtaaa ccgtttggta cggttggggg
    11041 cgggatattg agtaaaaccc tgcgtaagcc gataataagg ggattgttga gaagcaagga
    11101 aatgtcatgc ctgaaatcaa aattttccac aatccgcgtt gcagcaaatc gcgtgccgcc
    11161 ttgtccctat tggaagaacg cggcattgct gccgaagtgg tcaaatattt ggatacgccg
    11221 cccgacttgt ccgaattgaa ggatattttc aacaaattgg gcttggcatc ggcgcgcggg
    11281 atgatgcgtg tgaaagatga tttgtacaag gaattgggtt tggacaaccc cgatttggac
    11341 aatgacgcgc tgctgcgtgc catcgccgag catcccgccc tgttggagcg tccgattgtt
    11401 ttggcgaacg gtaaggcggc tgtcggcagg cctctggaaa atatcgaagc gatattgtga
    11461 acaaacggct gttttgcagc cgcaacggct tgcgctatta cctgttgggc ggtttctgtt
    11521 tgagtgtttt tccgcttttg ctggtgtttg cctcatccgt ttgggcggtt tatcggacgg
    11581 gcgggcaggt tttgccgccg tatgtccggg cggatgccgc gctggtgttg ggcgccgccg
    11641 cgtgggacaa acgcccttcc ccggttttcc gcgaacgcat caaccacgcc atcgcgcttt
    11701 atcagagccg cagggtaggc aaaatcgtgt ttacgggagg gcgaaccaaa aaaggctata
    11761 tgaccgaagc cgaggtcggg cggcggtatg cgctcaaaca gggggttccg gcgcgcaaca
    11821 tcctgtttga aaacacttcg cgcaacactt atgaaaacct gaacaacatc cgtccggttt
    11881 tgcgtgccaa cggtattgac agcgtggtga ttgtcagcga tccctaccat ttggcgcggg
    11941 cggcggaaat ggcggaggat ttgggtgtcc gcgtttatat gtctgccacc ccgaccacgc
    12001 ggtttgatgc gggaaataag aaaaaaatct ttatgctgca agagggatat gcgttatccc
    12061 tctaccgttt ggaaaaatgg ggcagccgct ttttgggatg gctgtctgat tgaagcggta
    12121 gaaaatgccg tctgaaactt atccgcaggc agggttcgga cggcattttt gatgcccaag
    12181 cacggtaaaa ccagtaaaat aaacgctttc aaagatttcg gagccatcat gaccgtcaaa
    12241 acccgtttcg cccccagccc caccggctac ctgcacattg gcggcgttcg caccgccttg
    12301 ttttcgtggg cgtttgcccg ccatcataaa ggcgaatttt tattgcgcat cgaagacacc
    12361 gacttggcgc gttctaccgc cgaatccgtc aacatcatcc tcgacggcat gaaatgggtc
    12421 ggcctgaact acgacaacgc cgacaatgtc gtgtaccaaa cccgccgttt cgaccgctac
    12481 aaagaagtca ttgccgaact tttagaaaaa ggccatgcct actactgcta ttgcagcaaa
    12541 gaagagctgg aagccatgcg cgagaaagcc gaaaaagaag gcacggcgac ttacgaccgc
    12601 cgctggcggc cggaagcggg caaaaccctg cccgaaatcc ctgccggcgt gcaacccgtc
    12661 gtccgcttca aaacgccttt ggatggcgta accaagtggg cggacttggt caaaggcgaa
    12721 atttccatcc ccaacgaagc cctcgacgac ctgattatcg cacgcgccga cggcacaccg
    12781 acctacaact tctgcgtcgt ggtggacgac tacgacatgg gcgttaccca cgttatccgg
    12841 ggcgacgacc atgtgaacaa caccccgaaa caaatcaaca tcttaaaagc catcggcgca
    12901 aacctgcccg aatacggaca cctgcccatg attctcaacg aacaaggcaa aaaaatctcc
    12961 aaacgcagcg gcgataccgt cgccattacc gatttcggcg caatgggcat cctgcccgaa
    13021 gccatgctca actatctggc gcgcttgggc tgggcgcacg gcgacgacga gttctttacg
    13081 atggaacaat tcatcgaatg gtttgatttg aaagacgttt ccccgtctcc aagccgtatg
    13141 gacttgaaaa aactctactg gatcaacggc gaacacatca aaatcaccac caacgaaaaa
    13201 ctggccgaaa tggtgaaacc gcgcctcgcc ctgcgcgata tccatgaaac aagcaagcct
    13261 gctttggaag acgtgttggc attggtcaaa gaccgcgccc aagatttgaa cgccttggca
    13321 gacgaatgcc tgtatttcta caaaaaacaa gtccctgccg aagccgatgt tgccaaacac
    13381 tgggacgacg aagcctccgc ccgtatgctg cgctttgccg aacgcctcga gggtttggaa
    13441 gactggaata ccgaagccat ccacgacctg ttcaaacctt tctgtgacga agaaggtatt
    13501 aaaatgggca aactcggcat gcctttgcgc ctcgctgtct gcggcacggc gaagacccca
    13561 agcgtcgatg ccgtgttggc attaatcggc aaagaagaag tgttgaaacg catccgcgct
    13621 taagttatcc acaggcgtgg gtgatgccgt ctgatgttgg aatacggctt cagacggcat
    13681 ttaaacggaa gttaaaaatg aaaaaaatat tttattttct gatggttgtt ttttctacaa
    13741 gcgtatgggc cggggatgcg gaagacaatc tgctcagcat ccaatccggt tatcgtgcct
    13801 tactgcaaaa acaaaacaat ctggacggaa aaatcatcgg gatgcagtcg gatttggaag
    13861 atgcgcgcag acggttgcag gcggctcagg cagacatcgc ccgtttggaa gcggaaattc
    13921 ctgcagcaat ggcgcaaaaa gcccggcagg ctgaagagct gaggcaaatc ggagtgcgtt
    13981 tggaccatgc ttggaatgcg gtttacggcg cagggggaac gaaagcgtcg gggaattgac
    14041 cgatgaattc cctctttgtg gacaatactg ttttcattac acggctgaaa gccgggcata
    14101 tcggcaggtt ggttcaggcg ttgtttgagg agtggcacgg atttgaaccg tggtcttctg
    14161 tggataagat tcatgcctat tacggcaggt gtttgaagga tgacgaactg ccgctggcat
    14221 ttgcggctgt ggatgattcc ggaatcctgt tgggttcggc tacggtcaag cggcatgata
    14281 tggaaagttt tccacagtat gaatattggt tgggtgatgt ctttgtttta cctgaatatc
    14341 gcggaaaagg cattggcagg aggctggtcg cccattgcat aggcgcagcg cgttcgctgg
    14401 ggataaagtt cttgtatctt tatacgcctg atgtgcaaat attttatgaa tcattcggct
    14461 gggcggttgt cgggcgacat ttccataacg gtgaatgggt tacggttatg cgtttggata
    14521 tggataaggt ttaagccgaa tggacaaatg ccgtctgagc tgttcggacg gcatttttat
    14581 gtttggaaac ttcttgtcag ataatgttta tccacagatt tttccatatg gtttgatgct
    14641 gttccgccaa cggaaattaa gatacggatt tgcacaaatc tttcagacgg tacagttctg
    14701 acaatgcttc gcgcggggtc aggctgtcgg gatcgagttt ttccaaggct gctgccaata
    14761 taccttcaaa atgtttttcc tctgctttgt ccacaaagtt gcccacattc ggttcatctc
    14821 ctttttcaga cggcatggta ctgaaaatat ccagttgggg acggtttgcg gcggcttggt
    14881 tttccagtcc gttcaaatgc ttttgggcgg atttcaatgc gcgtacaggc aggccggcga
    14941 gtttggcaac ggcgatgccg tagcttttgc cggcgggacc cggttggatt tggtgcagga
    15001 aaacgatgtc ctgtccctgt tcgagcgcgg aaaggtgcat attgacggcg gcggcgtggg
    15061 cttcgggcag gtaggtcagc tcgaaatagt gggtagcaaa caggctgaag gatttgtttt
    15121 tttgcagcag gtgttcggca acggcgtgcg cgagggcgag gccgtcgaaa gtggaagtac
    15181 cacgtccgac ttcgtccatt aaaacaaggc tttgttcggt ggcgtgatgc aggatgtagg
    15241 cggtttcgct catttcgacc atgaaagtgg agcggttgga ggcgaggtcg tccgatgcgc
    15301 cgatgcgggt gaagatttga tcgatgggcc cgattgtggc ggcatcggca ggcacaaaac
    15361 agccggtgtg tgccaataaa acaatcagcg cgacttggcg catgtaggtg gatttgccgc
    15421 ccatattggg gccgatgagc agcatgaggc ggtgtttgtg gtcaaggtcg gtgtggttgg
    15481 cggtgaagtg gcgtacctgc tgttcgacaa cgggatggcg gccgttttcg atgtggataa
    15541 ccggatagtc ggcaaactcg gggcggacga agttccgctc ttttgccaag gctgaaaatg
    15601 tggacaacac gtccagcgcg gcggcggctt tggcggcttt ttgaagctgc ggcaatgccg
    15661 tctgaaggtt tttcaatacg ccgtcaaaga gttgtttttc taaggcgagg gcttgctctt
    15721 gagcagtcag cactttgtct tcaaaggctt tcaactccgg cgtgatgaag cgttcggcgt
    15781 ttttgagggt ttgccggcgt tggtagtcgg caggtgcttg ttcggcttgg gttttggaca
    15841 attcaatgta aaagccgtga acgcggttga actcgacttt gagtgtggac aaaccggtac
    15901 gttcgcgttc cttggcttcc aaatccagca aaaattcgtc gccatggttt tgaatgcggc
    15961 gcaattcgtc cagttcggga tgaaaaccgt ggttgatgac attgccgtct ttcagccaga
    16021 cggaaggttc gggcaaaatg gcttggcgga gctgttcggc tgtggatagg ttttcaggga
    16081 aaacggcttt gagggtttcc aacaggctgc tgccgtttgc ggacaagtcg atttgtgcca
    16141 actcgaacag actgtcgcgt aaagatgcca aatcgcgcgg gcgggcgttg ccgacggcga
    16201 tgcgggcagc aatgcgttca atgtccgcaa tgtttttcag acggcattgg aggggtttgt
    16261 attggctttc cagcgcggca acggcttctt ggcgcgctcg gatgtgggcg cggttgcgta
    16321 aagggtggtg cagccagaga gccaagaggc ggctgcccat atgggtagcg caaaggtcga
    16381 gcgtggacat cagggtcggc gattttttgc cggagagggt ttgcgtgatt tcgagattgc
    16441 ggcgcgtggc ggcatccata ccgatatatt ggctgtcggt ttcgagcgac aggccgtcca
    16501 aatgttgcgg catcaggttt tgcgtcagac ggatatagtt caacagtgca cctgccgcgc
    16561 caatcgcaac ggcgtgttct ttgccgtcca aaccgaagcc gcgcaaatcc tggcagccga
    16621 aatattccgt cagcagtttt tcccccgcgt cggcggcaaa ctgccacgcg ttcaggcgcg
    16681 taacacccga tgccgtctga agttgcggtg cgtttttact gtcaggcaac agaatttccg
    16741 ccgcctgcag gcgcgccagt tcgtcgtcca atttatccac agttgtcagc ttggttttga
    16801 attcgccgct ttgcagcgat gcccacgcca aaccgatgta ttttttgtcg ggggacacgg
    16861 caacgatgcg gttggtttcc ttgtcttcca gcaatgcgga atcggtcagc gtgccgggcg
    16921 ttacgatgcg cacgactttg cgctccaccg gtcctttgcc tgcgccgact tcgccgacct
    16981 gttcgcaaat cgccacgctt ttgcccaact tgaccaggcg cgccagatat tgttcggcgg
    17041 cgtgaaacgg cacgcctgcc attttgaccg gctcgccatc cacctgtccg cgcgtggtca
    17101 gggtaatatc caaaagtttt gccgcttcta ccgcatcgtc gaaaaacatc tcgtaaaaat
    17161 cgcccatacg gtaaaacacc agtttgtcgg tatgttgcgc tttgatgccg aggtattgct
    17221 gcatcattgg ggaaacggcg gatttggaca tggggctgcc ttatcattag gaaaacggta
    17281 ttgtagcaaa aggttttgtc ttcgacggaa tgagactgac cgtaagcctg tcaataaggt
    17341 tgtggagaca actaggaaaa cagcaaagtt atccacagaa atattattaa gtcaaaaaac
    17401 atccacgctt atctgtctta tacagcaagt cttaaactca aacttatttg acaaaaaggt
    17461 aatgaaaata ttggatattt gctacttacg cacaagcagg ttggcaatca tcaaaatcat
    17521 cattaaaatt ttaaattcaa atattgatgg taaaagtttt ggaaatctgt gcaaacagta
    17581 aaattcatct atatcaaata agcatcaagt agttagatgt aatagtggaa tgtaacttta
    17641 tttcagaata caatacaggt attgaaattt cgtttcacag cttggagtat atacatgagc
    17701 attaaagtag cgattaacgg tttcggccgc atcggccgcc tcgcattgcg tcaaattgaa
    17761 aaagcccacg acatcgaagt cgtcgccgtc aacgacctga cccctgccga aatgctgctg
    17821 caccttttca aatacgacag cacgcaaggc cgtttccaag gtactgccga attaaaagac
    17881 gatgccatcg tggtaaacgg caaagaaatc aaagttttcg ccaatccgaa tcccgaagaa
    17941 ttgccttggg gcgagttggg tgtggatgtc gtcctcgaat gtaccggctt ctttaccaat
    18001 aaaaccaaag ccgaagccca catccgtgcc ggcgcgcgca aagtcgtgat ttccgcacct
    18061 agcggcaatg atgtgaaaac cgtcgtatat ggcgtaaacc aagacatttt ggacggcagc
    18121 gaaaccgtta tctccgctgc ttcctgcacc accaactgcc ttgccccgat ggcggcagtc
    18181 ctgcaaaagg aattcggcgt agtcgaaggc ctgatgacca ccatccacgc ctacaccggc
    18241 gaccaaaaca cccttgacgc gccgcaccgc aaaggcgatt tgcgccgcgc ccgcgccgcc
    18301 gcgctcaaca tcgtgcccaa cagcaccggt gccgccaagg ccatcggtct ggttatccct
    18361 gaattgaacg gcaaactcga cggctccgcc caacgcgtcc ctgttgccac cggctcgctg
    18421 accgaattgg tttccgtcct cgaacgccct gtaaccaaag aagaaatcaa cgccgcgatg
    18481 aaagccgccg ccagcgaatc ttacggctac aacgaagatc aaattgtttc ttccgacgtt
    18541 gtcggcatcg aatacggttc gctcttcgat gcgacccaaa cccgcgtgat gaccgtgggc
    18601 ggcaaacaat tggtgaaaac tgttgcctgg tacgacaacg aaatgtccta cacctgccaa
    18661 ctcgtccgca ctttggaata cttcgcaggc aaaatctaag gcttgaacaa acctgtggat
    18721 aagtaaatgc cgtctgaaca cattgcgttc agacggcatt gtttatctgt atagtggatt
    18781 aaatttaaac cagtacggcg ttaccttgcc ttgccgtact atttgtactg tctgcggctt
    18841 cgttgccttg tcctgattta aattcaatcc gctataactt gatattgcgg cttatggcga
    18901 acaaacaaca gccgtttgtt caactgctat gcggcaaaac cggatttttg cccgatttaa
    18961 agcggggttg gggaaagatc aataacggtt gcacggtttt cctcgatttg aaatctgatt
    19021 tcgtaatccg caatattcat cacataaatc cgttcgggaa tattctgata ggcggggcgc
    19081 ggatcttggg caatgctttg gctgataagg tttttggtgt ttgcagataa attttccgcg
    19141 ccgatgtttt cctgccaaac gacttccaac tctacgggtt tgccgctgac gaaaccagat
    19201 gcggcatcgg gtttggattc gacaaagggg atataaggct tgatgtccac aatcggcgtg
    19261 ccgtcgagca ggtctgcgcc gctgcaataa aggcggacgg gtttgccggt ttcgatgcgg
    19321 ttgagtttta agagtgatag tccgagatgg ttggggcggt gggggctgcg cgtggcgaat
    19381 acgcccattt tttgtttgcc gccgagccgt ggtgggcgca ccatttgtgc ccagccttca
    19441 tccaatacgc cgtgaaaaat aaaacttatc cacacataat cgaaatcttc cagcccgcgc
    19501 acgctgtctg cggtaaattc gggattcagc tcgatgcata cttctgcggc ggagactaaa
    19561 ccgggctggc gggcgatgcc gaatttctgt ttgtagggcg atcgggcggt gccgatgggg
    19621 gtaatggtat aagtcataag gttgtggata agtttttttg gaaaaacctt atcttatcac
    19681 aatcggtttt accgtttttg ggcagtaatt tgttataata cagggcattt taatcgcgtt
    19741 gaaataatga gatgattgtt tccattgatg ttgatgcaca aaaaacgttt acgccactgt
    19801 gtcctgacga actgcccgtg aacgaggggc atttgattgt cgaggagttg aatgctcaag
    19861 ccgctttggc ggatttgcgc gtgatgacga aagatgcgca tcatatggta gcgaaatggc
    19921 ttgtggataa ccctgttgat atgttgaagc cgacaggttt gcctgatgcg gatttgactt
    19981 gggtggctca tgcgatggtc ggtacgcgcg gctatgaatt attggacgga ctgccttctg
    20041 ccaaagaata tgattattgc gtttggaaag gtgttgatcc tgaattgcat ccttacggcg
    20101 cgtgttttca cgatattgag gaaaaactaa gcacagggct gattgaatgg ctgcgttgtc
    20161 aaaatacgga tacggttatt atcggtgggt tagctacgga ttattgtgtt aaaacaacgg
    20221 ttttgcagtt acttaaaggt ggtaattggc aggttatcgt caatgaagcg gcttgtcggg
    20281 gcattgcgcc ggataccatt gaaacggcat ggcaggaaat gagttctgcc ggtgcagtca
    20341 tcttgaaaaa cgctgaagaa attaaaaaat atattaataa tcaataagtt aaaattgttt
    20401 cacgtgaaac atacttctta aaatatgaaa attttgcttg tccgtttgtc tagtatgggc
    20461 gatttaattc acactttgcc cgcaattgag gatttggcgc gacaatgccc tgatgtagaa
    20521 ctccattggc tgtgtgaagc tggatttaca gatattgcgc gcctgcatcc gtttgtgaaa
    20581 aaaatccatg tgatgaaatg gcggcaatgg cgcaaacatc tctttcaggc tgaaacttgg
    20641 cgggaaatgg gtcatctgaa acagactttg cggcaggaag catttaattt tgtattggac
    20701 agtcaaggtc tgattaaaag cgcgtgtttc gctaaaatgg cgaaatcccc tatttatggt
    20761 ttggataaaa atagcgcgcg cgagggactg gctgcgctgg cgtatgcgaa aacatacgct
    20821 gtaccgaaag ggaaaaatgc tgtttggcgc aatcgtgagc tgttcgccca agtatttggg
    20881 tatgcgatgc ctgaaacgca ggtatttggc ttgactgttc ctgaggtagg ccgtctgaaa
    20941 aatttagcgc agccgtatta tgcggctttg catgcgacca gtcgggacag taagttatgg
    21001 cctatggaaa actggcggtc gttgctgcaa aagttgaatg aagaacagca atgcaatatt
    21061 tacctgcctt ggggaaatga agatgaaaaa acgcgtgcca aacagattgc agacggactg
    21121 ccgtttgcta ttgtgtgcga caaaataaat ttattgcagg cagcgtatct gctgaaatac
    21181 gcggtcggaa ttgtcggcgt ggataccggt ttgctgcatt tggcaaatgc cttggaaaaa
    21241 cctgtggtcg gcatttatac cgataccgat ccgattaaaa caggcgttca ggtttcgcca
    21301 attgcaaaaa atttgggcaa tatcgggcag attccgaccg cagatttggt ttatcaaacg
    21361 ttgatggatt gtgttgcagc agacaaaggc taaagggttg tctgaaactg atatagcacc
    21421 tgatattttt cagtttgtta agcataagaa tgtatatcta ccagcctgag taaatgcttt
    21481 aaaaatggta taatcggcaa gcattatccg aaagattttt gaatgaattc gtttttaagg
    21541 aaaacggatt tggttttata gggaagaagg tttggtttcg ctggatggtg aaagcagcgt
    21601 tctttttagg agggttcaat gaaagcactg gtcgcagtaa agcgcgtagt ggactacaac
    21661 gtcaaagttc gtgtaaaagc cgatggttcg gatgtggata tcggcaatgt caaaatgtcg
    21721 atgaatccgt ttgacgaaat cgctgtggaa gaagctgtcc gtttgaaaga agccggaaaa
    21781 gtaagcgaaa tcgtagcggt ttctttgggt gagaaaaaat gcgaagaaac cttgcgtaca
    21841 gctttggcga tgggtgccga ccgtgccatt catgttgaaa ccgatactaa actggagtct
    21901 ctggccgttg ctaagttgct gaaagccgtt gcggacaaag aaaatccgca aattttcttt
    21961 ttgggcaaac aagcgattga tgatgatgcc aatcaagtgg cgcaaatgct ggcagctttg
    22021 ctgaatgcgg cgcaaggtac gtttgcttca aaagtacaca ttgaatgtgg tgaagtacag
    22081 attgtgcgcg aaattgatgg cggcgaagaa accatagcat taaaactgcc tgctgttatc
    22141 agtgctgatt tgcgtttgaa cgagccgcgc tttgtcaaac tccccaatat tatggcggca
    22201 aagaaaaaac ctttggaaaa actgactcct gacgatttgg ttgccgacat ttcacctcgt
    22261 ttgaaaacgg tgaaatttgc cgaacctaag gcgcgtcagg caggcgtaaa agtagcaagc
    22321 gttgccgaat tggttgaaaa attgaaaaac gaagccaaag tgatttgagg aggctgaaat
    22381 gagtgtattg attattgtcg aacacgacaa caaacagttg aatcctacca ctttgcatgc
    22441 tgttaccgct gccgctaagc tgggtaaaat cgatttattg gttgccggaa gcggtgcatc
    22501 tgctgtggta gagttcgcaa aacaagtggc gggtgtggaa aaagttttgg ttgcagatgc
    22561 tgcccattat gccgaaggtt tggctgaaga gttggctccg ctggttgtta aattggcagt
    22621 ggattactgc tatgttgcag caacggcaac tacattcggt aaaaaccttt tgcctcgcgt
    22681 agcagcctta ttagacgtac cgcaaatttc tgatttgacc gaaattgtgg ataacacgac
    22741 ttttgtgcgc cccatttatg cgggtaatgc atttgaaacc gtgcaagctg attcagaaaa
    22801 attggtgctg accttccgtg cgacggtttt tgacgcagtg gcggcgcaag gtggtaatgc
    22861 tgaggtaatt aatgttgaag caacccctgc ccaaaacctg agtcgttttg ttaaccgtca
    22921 gctttcccat tccgatcgtc ctgaactgac tcaggcaaaa gtgattgttt ccggtggtcg
    22981 tgcgttgggt agtgcggaaa aattcaatga agtgctgaca ccgttggcgg atgttttagg
    23041 tgcggcaatc ggtgcatccc gtgcagcagt tgatgccgaa tatgcgccaa acgatgctca
    23101 agtcggacaa accggtaaag tggttgcgcc gcaactctat tttgcaatcg gtatttcagg
    23161 tgcaattcaa cacgttgccg gtatgcaaga cagtaaggtg attgttgcaa tcaataaaga
    23221 tgctgatgcg ccgattttca atgtagccga ttacggattg gttggcgatt tatttgaaat
    23281 cgttccacaa ttaacagaag tattgaaaaa ttgatgtttc acgtgaaact ttcagacgac
    23341 cttgttatta atgaggtcgt ctgaaaacat ttcagcatga ttacgactta taaaaccatt
    23401 acttcctcga cgcaggctga gtttaaagat aaaggcagcc gttttattgc atttacctat
    23461 ccgattcgga cattggctga tgtgaaaaaa tacctcgatc tgttaaagga agagcatcat
    23521 aaagcacgac actggtgcta tgcctatcgt ttgggtgtgg atggtgtgca atttcgtgcc
    23581 aacgatgatg gagagccatc aggaagtgct ggacgaccaa ttttgggaca gattgattcg
    23641 gtgggtatta ccgacgtttt ggttgtggtc gtccgctatt tcggtggtac tttgttaggt
    23701 gttccaggtc tgatacatgc gtacaaagag gcgacggctc aagcgttggc agttgcagaa
    23761 gtagttgaaa agaatattga aaaaactgtt tggctgaaat gtgaatatcc gtttttgaat
    23821 gaagcgatac gcattgccaa acaatatcag gcggatatat tggagcggga tttgcagttg
    23881 gattgccgat tgacggtcag tttgtcgttg gtaaattatg aggcctgtgt tgcggcttgg
    23941 aagaatactc ggcagattga agtaaatacg gaaaagcctt ttgaatgaaa ggtcgtctga
    24001 aatgctttgt gatggtattt cagacgacct cttcgctgac taatcttctt gtgtatattt
    24061 gtctaaggca tcgacgctgg agcgcaaata taaccaagcc aattgatgga attcgcccag
    24121 cgcgttccat agcgcatctt cactcataat gctgtattcg ccttccgtac tcaaatccag
    24181 ttctaccccg tcttcaatag cctgatgaca cgcctgatac tcgtgggtat agaaattgtc
    24241 catgtcgcga attaaagtga cgacatattt ccaacggcgg atgtcttctt ccagttgcgg
    24301 tagtaaatga caccattcgc ggtatttgct ttggatttca tcaatacgtt tttgcatggt
    24361 tgcttgtcct tttttaattt atggataagt tgaataggtt gcagagtgga atgaagcggt
    24421 cttttgtttg attctactaa aatttcttca gatgggataa aagtcccttt gtatcgagtt
    24481 ttcgttaaaa gtacatattt gtcaaggaga tggtatgaaa ctgctggtta tcggtaatgg
    24541 cggtcgcgaa cacgcgctgg cttggaaatt ggcgcagtcg cctaaagtgg aaacagtatt
    24601 tgttgcgcct ggtaatgccg gtacagcgat tgaacccaag ttgcaaaaca tcgacttgac
    24661 tgcgcatcag gatttgattg aattctgtcg taaagaaaat attgttttta ccgtcgtcgg
    24721 ccctgaagcg cctttggcgg caggtattgt ggatgatttc cgtgctgcag gactaaaaat
    24781 attcggtccg acacaatatg cggcgcagtt ggaaagttcc aaagatttcg ccaaagcatt
    24841 tatggcgaaa tacaatattc cgaccgcgca atatcaaacc tttgaaaacg ccgatgccgc
    24901 acatgattac gtcaatcaga aaggtgcgcc tatcgttatc aaagccgatg gtttggcggc
    24961 aggtaaaggc gtgattgtgg cgatgacttt ggatgaagcg catgctgcga ttgatgatat
    25021 gctgctggac aacaaaatgg gcaatgccgg cgcgcgtgtt gtaattgaag atttcctgca
    25081 aggcgaagaa gcgagtttta tcgtcatggt tgatggcaat aatgtactgc ctatggcaac
    25141 cagccaagac cacaagcgtc ttttagacgg cgacaaaggt ctgaatacgg gcggtatggg
    25201 tgcgtacagc cctgcgcctg tggtaacgcc tgttgtgtac gaacgcgcga tgaatgaaat
    25261 tattttgccg accgtagcag ggatgaaagc ggaggggcat gagttcaccg gtttcctgta
    25321 cgcaggtttg atgattgatc aaagcggtgc accctatacg attgagttta actgccgttt
    25381 cggcgatcct gaaacccagc cgattatgag ccgactgaac agcgacttat cggatttggt
    25441 tgaagcggca atagacggca aactcgatag cgtaaccgcg gaatggagcc cgcaaactgc
    25501 cgtgggcgtg gtactggcgg cgcaaaatta ccccgaaacg cccaaaaaag gcgatattat
    25561 ttccggtctg gatgctgcca accaaatcgg caaagttttc catgcaggta caacggcaaa
    25621 agagaaaggt gacgtattga ccaacggcgg acgcgtattg tgtgttgtgg gattgggcga
    25681 caatgtggcg caagcgaaag ctaaggcata tggcgcgttg gaaaaaatca gtttcgacgg
    25741 gatgcaatac cgtaaagaca ttgccgataa agcgattaac cgttaactag aaagaggatg
    25801 atgccgtctg aagccaagta tgactgatgt gcttcagacg gtattttata ttatgttatt
    25861 tccgagaatt atcgcagcat cagcgcaacg taagttaagc gtttatttga aaaaaggcgg
    25921 tttggtcgct tatccgaccg aatcttgtta tggcttgggg tgtcttccga cattagccaa
    25981 agcactcggt aagttggcgc atttgaaaaa aagaccgcaa cacaagggta tgattgtcat
    26041 cgggaatcaa tttgagcaat tgcagccttt acttcaaatg ccgtctgaaa atctgcagga
    26101 tatgcttaga aaagaatggc ccgcccctaa aacgttccta ttatccgcca aatcctgtgt
    26161 cttacctgag ttgcgcggga aacagcgcag caagttggcg gtcagggttc ccgcccatgt
    26221 aggtgcgcgc cgcttgtgtc aggctttgca aacgcctttg gtctcgactt cgtgcaaccg
    26281 cgcaggcaaa cgcgcgtgtc ggacggagag ggaagtcaga aggcaattcg gacgcgatgt
    26341 gtggattgtt ggtgggagaa tcggcaggca gaaatcgccg agtcagatta ttgacgggga
    26401 aacaggtaaa cgtttgcgtt agatatgggt atttgaatga aaactttttt tgcatacaca
    26461 aagaaaaaat tttggggctg tactagatta gccctaaatc ccacaccaat cccgcaggat
    26521 tttaagctgt tgagacggtg tgccgaagtt aaatcgaaat tcgcattctt tcaagaacag
    26581 cgggaaagat ttgcgatcga ttccattgta ttttcgcaag acgcgttttg cctgattcca
    26641 aaagttctca atgccgttaa tgtggttttg acggtctgca aactccttgg aatggttaat
    26701 gcggtaatgg ataaaaccgc tcacgtccaa cttgtcgcag ctgctcagac tattggtata
    26761 aacaatgctg tccggcatga ttttcttttt gatgacaggg agtaacgttt cagacttggc
    26821 attatccacc acaacggtat agacccgtcc gttgcgtttc agaatgccga agacaa
//
LOCUS       DAWGKF010000006        26524 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.006, whole genome shotgun sequence.
ACCESSION   DAWGKF010000006 DAWGKF010000000
VERSION     DAWGKF010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 26524)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26524)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26524
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.006"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            123..2150
                     /gene="uvrB"
                     /locus_tag="WHR07_000168"
     CDS             123..2150
                     /gene="uvrB"
                     /locus_tag="WHR07_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HEZ2129442.1"
                     /translation="MEVIRYPDSPFKLHQPFPPAGDQPTAIAGLLEGLSDGLAYQTLL
                     GVTGSGKTYTMANVIAQSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYDYY
                     QPEAYVPSRDLFIEKDSAINEHIEQMRLSATKNLMTRDDVIIVATVSAIYGIGDPTEY
                     QQMVLSVKEGDTIEQRDIIATLVSMQYERGDLDFKRGSFRVRGDVIDVYPAESSENAL
                     RISLFDDEIDRLDMFDPLSGSLIQRVGRYTVFPSSHYVTPRDTVLRACESIKEELRER
                     IDFFTKENRPVEQQRIEQRTRFDLEMLYEMGFCKGIENYSRHFSSKKEGEPPPTLMDY
                     LPDNAIMFIDESHVTVTQIGGMYKGDASRKQNLVDYGFRLPSARDNRPLKFHEFEKVM
                     PQTVFVSATPAKYEEEHAGQVVEQVVRPTGLVDPQIIIRPVATQVDDLMSEINDRIQK
                     GERVLVTTLTKRMAEQLTDYYSELGIKVRYLHSDIDTVERVEIIRDLRLGLFDVLVGI
                     NLLREGLDIPEVSLVAILDADKEGFLRSHRSLIQTIGRAARNVNGVAILYADKITDSM
                     KAAIDETERRREKQIKFNEEHGIVPQQIKKQVKDIIDGVYHEEDGGKGRRQGKNKVKV
                     SEIHNEEDAVKEIAKLEKAMQQAARDLQFEEAAVLRDRIRGIKEGLLFGSE"
     gene            2262..2549
                     /locus_tag="WHR07_000169"
     CDS             2262..2549
                     /locus_tag="WHR07_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129443.1"
                     /translation="MTYSFRVENINDISDIPENHLEIVRAALPSNRSNALSREPDGAQ
                     AVFVYEIDGEFRAKLFDRIKDTDSYLQATEDNYSNDPRSIGVVYVLEQQQG"
     gene            complement(2730..3446)
                     /gene="trmB"
                     /locus_tag="WHR07_000170"
     CDS             complement(2730..3446)
                     /gene="trmB"
                     /locus_tag="WHR07_000170"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HEZ2129444.1"
                     /translation="MTDTAENQTQNNWQAEHPRSIRSFVLRQSHMTAAQQRAIDTLWD
                     SFGIDYQATPADLDANFGSNRPKILEIGFGMGTATAEIARRLPETDFLAIDVHGPGVG
                     NLLKLINENHLENIRVMRHDAVEVIENMLQDGSLDGIHIFFPDPWHKKRHHKRRLIQA
                     PFIAKLLPKLKTGGYIHLATDWEEYARQMLEVLSSFDSLQNTAADYAPTPDYRPETKF
                     EARGKRLGHGVWDLVFKRMG"
     gene            complement(3568..4632)
                     /locus_tag="WHR07_000171"
     CDS             complement(3568..4632)
                     /locus_tag="WHR07_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HEZ2129445.1"
                     /translation="MYLLYASRHFEEALEWAKTSAKNNNPHGQYLLAQYCRYGTPPDF
                     ETAHLLYRKAAAQGLPEAHWQLGLQYRFGQGTKVDTAQAVNHLRAAAQQGYIPAYTPL
                     AELILPTAPDEAVYRFQQAAQENDPDSHAALADIYLQGKYQERNHKLALHHAEAAAAE
                     RHPEGLRILGDICRYGLGIAPDTEKARHYYRQAAEAGSLSAYQKLISDSALNHPDQYG
                     GIKDSAIRRQRAEQLYQKAQALHYGLQCAPEYAAALKLYTEAAELGHSKAQTNLGSMY
                     YFGQGIAADYGKARKWFEQAAAQKDSMAFYNLACIHYSGHGVGPDKEKACRYLQEAIN
                     NGYGQKSVLQELLQQWQNAV"
     gene            complement(4697..4972)
                     /locus_tag="WHR07_000172"
     CDS             complement(4697..4972)
                     /locus_tag="WHR07_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129446.1"
                     /translation="MNNPDLPYRQTLECLSQKQYNFTEVRRLLTEAALAGHPAAAFEL
                     AKHLMDADSPYQDREQGMEMLRIAAEQGHPYARYNLAYIQELEGAPP"
     gene            complement(5089..6975)
                     /gene="uvrC"
                     /locus_tag="WHR07_000173"
     CDS             complement(5089..6975)
                     /gene="uvrC"
                     /locus_tag="WHR07_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEZ2129447.1"
                     /translation="MPSEAVFQMIDMNTENRSPEQFDIPLFLKNLPKLPGVYRFFDEG
                     GKVLYVGKAVNLKRRVSGYFQKNDHSPRIALMVKQVRHIETTITRSESEALILENNFI
                     KALSPKYNILFRDDKSYPYLMLSGHQYPQMAYYRGTLKKPNQYFGPYPNSNAVRDSIQ
                     VLQKVFMLRTCEDSVFEHRDRPCLLYQIKRCTAPCVGHISEEDYRDSVRQAATFLNGK
                     TDELTRTLQHKMQTAAANLQFEEAARYRDQIQALGIMQSNQFIDSKNPNNPNDIDLLA
                     LAVSDGIVCVHWVSIRGGRHVGDKSFFPDTKNDPDPNGQDYAEAFVAQHYLGKSKPDI
                     IISNFSVPDALKEALEGEHGKQMQFVTKTIGERKVWLKMAEQNAQMAIAQRRLQQSSQ
                     QHRIDELAKILGMDSDGLNRLECFDISHTQGEATIASCVVYDEQNIQPSQYRRYNITT
                     AKPGDDYAAMREVLTRRYGKMQEAEANGETVKWPDAVLIDGGKGQIGVAVSVWEELGL
                     HIPLVGIAKGPERKAGMEELILPFTGEVFRLPPHSPALHLLQTVRDESHRFAITGHRK
                     KRDKARVTSSLSDIPGVGSKRRQALLTRFGGLRGVIAASREDLEKVEGISKALAETIY
                     NHLH"
     gene            complement(7030..9192)
                     /locus_tag="WHR07_000174"
     CDS             complement(7030..9192)
                     /locus_tag="WHR07_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HEZ2129448.1"
                     /translation="MQQKIRFQIEGMTCQACASRIEKVLNKKDFVESAGVNFASEEAQ
                     VTFDDSKTSAADIAKIIEKTGYGAKEKTEDTLPQAEAEHHIGWRLWLLSAINIPFLVG
                     MAGMMIGRHDWMIPPLWQFALASIVQLWLAIPFYKSAWASIKGGLANMDVLVTIGTVS
                     IYLYSVYMLFFSPHAAHGMAHVYFEAGVMVIGFVSLGKFLEHRTKKSSLNSLGLLLKL
                     TPTQVNVQRDGEWKQLPIDQVQIGDLIRANHGERIAADGVIESGSGWADESHLTGESN
                     PEEKKAGGKVLAGALMTEGSVVYRAAQLGSQTLLGDMMNALSEAQGSKAPIARVADKA
                     AAVFVPAVVGIALLTFIVTWLIKGDWTVALMHAVAVLVIACPCALGLATPAAIMVGMG
                     KAVKHGIWFKDAAAMEEAAHVDAVVLDKTGTLTEGRPQVAAVYCVPDSGFDEDDLYRI
                     AAAVEQNAAHPLARAIVSATQARGLEIPAAQNAQTVVGAGIAAEVERAGLVKAGKAEF
                     AELTLPEFSDGVWDIASIVAVSVDNKPIGAFALADALKADTAEAIGRLKKHNIDVYIM
                     SGDNQGTVEYVAQQLGIAHAFGNMSPRDKAAEVQKLKAAGKTVAMVGDGINDAPALAA
                     ANVSFAMKGGADVAEHTASATLMQHSVNQLADALLVSQATLKNIKQNLFFAFFYNSLG
                     IPLAALGFLNPVIAGAAMAASSVSVLSNALRLKRVKID"
     gene            9331..10281
                     /gene="trxB"
                     /locus_tag="WHR07_000175"
     CDS             9331..10281
                     /gene="trxB"
                     /locus_tag="WHR07_000175"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEZ2129449.1"
                     /translation="MSQHRKLIILGSGPAGYTAAVYAARANLNPVIITGIAQGGQLMT
                     TTEVDNWPADADGVQGPELMARFLAHAERFGTEIIFDQINAVDLQKRPFTLKGDMGEY
                     TCDALIVATGASAKYLGLPSEEAFAGKGVSACATCDGFFYKNQDVAVVGGGNTAVEEA
                     LYLANIAKTVTLIHRRSEFRAEKIMIDKLMKRVEEGKIILKLESNLQEVLGDDRGVNG
                     ALLKNNDGSEQQIAVSGIFIAIGHKPNTDIFKGQLEMDEAGYLKTKGGTADNVGATNI
                     EGVWAAGDVKDHTYRQAITSAASGCQAALDAERWLGSQNI"
     gene            10436..10804
                     /gene="rpsF"
                     /locus_tag="WHR07_000176"
     CDS             10436..10804
                     /gene="rpsF"
                     /locus_tag="WHR07_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HEZ2129450.1"
                     /translation="MRHYEIVFIVHPDQSEQVPAMVERYKTMIAEANGKIHRLEDWGR
                     RQLAYPINKIHKAHYVLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPM
                     LGGEKAKNLLSGASEEAVAQ"
     gene            10805..11107
                     /gene="priB"
                     /locus_tag="WHR07_000177"
     CDS             10805..11107
                     /gene="priB"
                     /locus_tag="WHR07_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HEZ2129451.1"
                     /translation="MGFNNLVSLAALIEKVFPIRYTPAGIPVLDIILKHESWQEENGQ
                     QCLVQLEIPARILGRQAEEWQYRQGVYVHVEGFLAQKSRRSLMPMLRIQNIQEYKG"
     gene            11114..11344
                     /locus_tag="WHR07_000178"
     CDS             11114..11344
                     /locus_tag="WHR07_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009120066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HEZ2129452.1"
                     /translation="MARQSFKRRKFCRFTAEKIQEVDYKQVDLLKDFISENGKIIPAR
                     ITGTKAFYQRQLAVAVKRARFLALLPYTDQHK"
     gene            11361..11813
                     /locus_tag="WHR07_000179"
     CDS             11361..11813
                     /locus_tag="WHR07_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HEZ2129453.1"
                     /translation="MQIILLEKIGGLGNLGDIVTVKNGYARNFLIPAGKAKRATEANM
                     KEFEVRRAELEAKQAEILADARVRQEKLDGQTVTVAQKAGVDGRLFGSVTNADIAAAI
                     VAAGIEAVKANVRLPNGPLKAVGEYEVEVALHTDAVAKITVAVVAATE"
     gene            11827..11934
                     /locus_tag="WHR07_000180"
     CDS             11827..11934
                     /locus_tag="WHR07_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspA"
                     /protein_id="HEZ2129454.1"
                     /translation="MPSETLPIVGMWFQTVFVLFSVYSAKVGMVVFIVD"
     gene            complement(12601..13407)
                     /locus_tag="WHR07_000181"
     CDS             complement(12601..13407)
                     /locus_tag="WHR07_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEZ2129455.1"
                     /translation="MWHWDIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQG
                     LAQHPYAQHLAVGTSFAVMVFTAFSSMLGQHKKRAVDWKTVFAMMPGMIFGVFTGALS
                     AKYIPAFGLQIFFILFLTAVAFKTLHTGRQTASRPLPKLPGLTAVSTLFGTMSSWVGI
                     GGGSLSVPFLIHCGFPAHKAIGTSSGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLY
                     LPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIMLLLIAGKMLYNLL"
     gene            complement(13408..14154)
                     /gene="pssA"
                     /locus_tag="WHR07_000182"
     CDS             complement(13408..14154)
                     /gene="pssA"
                     /locus_tag="WHR07_000182"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HEZ2129456.1"
                     /translation="METPTNTPQRSLRQNSIYLLPNSFTIAALFSAFYAITQSMHGRY
                     ETAAIAVFISMLLDGMDGRVARLTNSQSAFGEQLDSLADMVSFGVAPALIAYKWQLWQ
                     FGKIGYSVAFIYCACAALRLALFNTLIGKVDKRWFIGVPSPTAAALIVGLIWVNHSVE
                     KFPAVHWWALGITLFAGLSMIVQIPFWSFKEINIRRQVPFVGMLLAVLLLLLVTWEPS
                     LVLFLFFLGYSLSGYIMAARRFWKKYRKAD"
     gene            complement(14209..14631)
                     /locus_tag="WHR07_000183"
                     /pseudo
     CDS             complement(14209..14631)
                     /locus_tag="WHR07_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688963.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            14737..15219
                     /locus_tag="WHR07_000184"
     CDS             14737..15219
                     /locus_tag="WHR07_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4189 domain-containing protein"
                     /protein_id="HEZ2129457.1"
                     /translation="MMKKILAVSALCLMTAAARAADTYGYLAVWQNPQNADDVLQVKT
                     TKEDSTKSEAFAELEAFCKGQDTLAGIAEDEPTGCRSVVSLNNTCVALAYPKALGAMR
                     VENAVVITSPRFTSVHQVALNQCIKKYGVQGQCGLETVYCTSSSYYGGTVRSLIQNLK
                     "
     gene            complement(15271..16482)
                     /locus_tag="WHR07_000185"
     CDS             complement(15271..16482)
                     /locus_tag="WHR07_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease"
                     /protein_id="HEZ2129458.1"
                     /translation="MNQLKLAVSGAQILFVAFGAMVLVPLLTGLNPALALLGAGLGTL
                     LFQITTKRKVPIFLGSSFAFIAPIIYSVGEWGLPSTMFGLFTAGFMYFVFAALIRWRG
                     LAAVHKLLPPVVIGPVIMVIGLSVAVAASSMAMGQADGKQVIDYTDSLILSGFTFAVT
                     AIVSVFGSRMMKLIPILIGVASGYVLALLMGLVDTASIAHAPWFAVPHFETPQVNWQA
                     ALFMLPVAVAPAIEHIGGIMAIGNVTGKDYTKDPGLDKTLAGDGLGVCVAGLIGGPPV
                     TTYGEVTGAVMITKNSNPVIMTWAAVFAVCMAFFGKFNAFLASIPMPVMGGIMLLLFG
                     TIASLGVKTLIDAKVDLMLPKNLVIVSSVLTTGIGGMTLKLGSFSFAGVGLCAVLAIM
                     LNSLLPDPKES"
     gene            16705..19143
                     /locus_tag="WHR07_000186"
     CDS             16705..19143
                     /locus_tag="WHR07_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HEZ2129459.1"
                     /translation="MTEKSHKKTAKGRAGSPSPTSARNKKADNGARGNKVSERLKAVK
                     ELQKTETKKARPEHVVNLIGDALWLMGLAATLYLAISLISFDMGDPSWSHSSPVVEDV
                     ANWGGLFGAYVADVGYYLFGWSFWWWIAAACVMLYKNFRLHAKQTENEAYNHKIAAAA
                     LFVLTVFSPVLEYFVLGGKYADSLPVGAGGMVGIRVGAVFAWLLGKSGSLLIILVVLL
                     LSLSLLVQISWLEFLNGAGRAVQNRLSALSGKVMALGKRRPNSKTDGVDTQNTRRMVK
                     EAKNITAKPVALPEGSSSNRKSVAVSVAPSPKIQVSLFEDDEPRQAGEYHKPTLNLLR
                     IPDSEPVSINPAELERTAELIESKLAEFGIGVQVVSATSGPVITRYEIEPAQGVKGSQ
                     IVALSKDLARSMSLQSVRIVETIAGKNTMGIELPNDKRQDVMLSEILSSPVFAEAKSK
                     LTVALGKDIAGTPVVGDLAKMPHLLVAGMTGSGKSVGVNGMIMSMLFKATPDEVRFIM
                     IDPKMLELSIYDGIPHLLCPVVTDMREAGQALNWCVAEMEKRYRLLSHAGVRNLEGFN
                     QKVEAAKAAGKPLLNPFSLNPDSPEPLEKLPMIVVVIDELADLMMTERKAVEQQIARL
                     AQKARAAGIHMIVATQRPSVDVVTGLIKANIPTRMAFTVQSKIDSRTILDQMGADELL
                     KYGDSLFLQPGSAEPTRLQGAFVSDDEVHQVVNYVKSQAPADYIEGLLSGEAALETAN
                     IVNPNADSDELFDQAVAYVLESKKTSISSLQRQLRIGYNRAANLMEALENAGVVSPTD
                     LNGSRKILAHKDHL"
     gene            19352..20662
                     /locus_tag="WHR07_000187"
     CDS             19352..20662
                     /locus_tag="WHR07_000187"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003742150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEZ2129460.1"
                     /translation="MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGF
                     RPGKAPLKMIAQMYGASAQNDVINELVQRRFHDVAVAQELKVAGFPRFEGVEEQDDKE
                     SFKVAAIFEVFPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREAR
                     NSDRVIIDFEGKIDGEPFAGGASKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNF
                     PEEYHGKDVAGKTAVFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVQKNVS
                     REVERRVNEQTKESVMNALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAANL
                     DLPLDIFKEQAERRVSLGLILAKLVDENKLEPTEEQVKAVVANFAESYEDPQEVIDWY
                     YAEPSRLQAPTSLAIESNVVDFVLGKAKVNEKALSFDEVMGAQA"
     gene            20758..21372
                     /gene="clpP"
                     /locus_tag="WHR07_000188"
     CDS             20758..21372
                     /gene="clpP"
                     /locus_tag="WHR07_000188"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HEZ2129461.1"
                     /translation="MSFDNYLVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDES
                     ANLVVAQLLFLESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAAS
                     MGAFLLSAGEKGKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLM
                     AKHCGRDLADLERDTDRDNFMSAEEAKEYGLIDQILENRASLQF"
     gene            complement(21429..22694)
                     /gene="ispG"
                     /locus_tag="WHR07_000189"
                     /gene_synonym="gcpE"
     CDS             complement(21429..22694)
                     /gene="ispG"
                     /locus_tag="WHR07_000189"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HEZ2129462.1"
                     /translation="MNTLQRRKTHQVRIDHITVGSEAPVVIQSMTNTDTADAKATALQ
                     IKELSDAGSEMVRITVNSPEAASKVAEIRRRLDDMGYATPLIGDFHFNGERLLAEFPE
                     CGKALSKYRINPGNVGKGVKGDEKFAFMIRTAAENDKAVRIGVNWGSLDQSLAKRMMD
                     ANLASSAPKPPEEVTKEALIVSALESAEKAVLLGLPEDKIILSCKVSAVQDLIQVYRE
                     LGSRCAYPLHLGLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGSPRTQEV
                     VVGQEILQTMGLRSFTPMVTACPGCGRTTSTVFQELAQDVQNYLRQKMSIWRTLYPGV
                     ESLNVAVMGCVVNGPGESKLADIGISLPGTGETPVAPVYVDGERKITLKGDNIATEFL
                     AIVEEYVKTNYGENGSKRNQNKIIPIQSL"
     gene            complement(22710..23471)
                     /gene="pilW"
                     /locus_tag="WHR07_000190"
     CDS             complement(22710..23471)
                     /gene="pilW"
                     /locus_tag="WHR07_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis/stability protein PilW"
                     /protein_id="HEZ2129463.1"
                     /translation="MPFKPSKRISLLLVLALGACSTSYRPSRAEKANQVSNIKTQLAM
                     EYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD
                     SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLA
                     EAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWK
                     IAKALGNAQAAYEYEAQLQANFPYSEELQTVLIGQ"
     gene            complement(23474..24568)
                     /gene="rlmN"
                     /locus_tag="WHR07_000191"
     CDS             complement(23474..24568)
                     /gene="rlmN"
                     /locus_tag="WHR07_000191"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEZ2129464.1"
                     /translation="MKTNLLNYDLQGLTRHFADMGEKPFRAKQVMRWMHQSGAQNFNE
                     MTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTRKWLLDVGTGNGVETVFIPESDRGT
                     LCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQLWWANKAMGVTPKNERVISNVVM
                     MGMGEPMANFDNVVTALSIMLDDHGYGLSRRRVTVSTSGMVPQMDRLRDVMPVALAVS
                     LHASNDEVRNQIVPLNKKYPLKELMAACQRYLVKAPRDFITFEYVMLDGINDKAQHAR
                     ELIELVKDVPCKFNLIPFNPFPNSGYERSSNENIRVFRDILQQAGFVVTVRKTRGDDI
                     DAACGQLAGQVQDKTRRQQKWQQILIGQQG"
     gene            complement(24711..25136)
                     /gene="ndk"
                     /locus_tag="WHR07_000192"
     CDS             complement(24711..25136)
                     /gene="ndk"
                     /locus_tag="WHR07_000192"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEZ2129465.1"
                     /translation="MAIERTISIIKPDAVGKNVIGKIYSRFEENGLKIVAAKMKQLTL
                     KEAQEFYAVHKDRPFYAGLVEFMTGGPVMIQVLEGENAVLKNRELMGATNPSEAAEGT
                     IRADFATSVSINAVHGSDSVENAALEIAYFFSQTEICPR"
     gene            complement(25195..26346)
                     /locus_tag="WHR07_000193"
     CDS             complement(25195..26346)
                     /locus_tag="WHR07_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AFG1 family ATPase"
                     /protein_id="HEZ2129466.1"
                     /translation="MSNRDQLFKAPPFENHSPLTWYQAASQLPNFIRDDAQAAAIEHL
                     DRLWTELMMFKRKRNRFLGRSLRSPQVPKGLYFYGGVGRGKSFLMDAFFGCLPYRRKR
                     RVHFHAFMAEIHQRLKTLKSESNPLKSVAAEIAKETRVLCFDEFHVSDIADAMILGRL
                     LENLLNEGVVLVATSNYAPSELYPQGQNRSSFLPTIALIESSLTVLNVDGGEDYRLRT
                     LRPAEIFFTPANEENEAKLAKLFKEMTGITDLNPGISTIHGREIPHKAESGRAIWFDF
                     RALCFGPRSQSDYLYLAEHYEMVFISGLEQLSPQEKAEARRLTWLIDVLYDFRVKLCA
                     TGAVDVNHIYTEGDFAEEFTRTASRMVEMQSEVYLEQPHLTLSPKASGG"
BASE COUNT         6297 a         6629 c         7221 g         6377 t
ORIGIN      
        1 tgggtagcga ttgggtttca gacggcatac attcaggatt tcaccgcctt atgccgtctg
       61 aaagacgttt ccgacccatc cctactacac gctttgtccg caaacgcatc acaggcaaga
      121 ttatggaagt catccgatac cccgattccc ctttcaaact ccaccaaccc ttcccgcccg
      181 caggcgacca gcctaccgct attgccggct tgctcgaagg gctttcagac ggccttgcct
      241 accaaaccct gctcggcgta accggttcgg gcaaaaccta caccatggcg aacgtcatcg
      301 cccaaagcgg ccgacccgcc atcatcatgg cgcacaacaa aacccttgcc gcccagcttt
      361 atgccgaaat gcgcgagttt ttccctgaaa acgcggtgga atatttcgtc tcctactacg
      421 actattacca acccgaagcc tatgtgccca gccgcgacct gttcattgaa aaagacagcg
      481 cgatcaacga acatatcgag cagatgcgcc tttccgccac caagaacctg atgacgcgcg
      541 acgacgtgat tatcgtcgcc accgtgtccg ccatctacgg tatcggcgac ccgaccgagt
      601 atcagcaaat ggtgttgtcc gttaaagaag gcgacaccat tgagcagcgc gacatcatcg
      661 ccacgctcgt ttccatgcag tacgagcgcg gcgatttgga ctttaaacgc ggcagcttcc
      721 gcgtgcgtgg cgacgtgatt gacgtgtacc ccgccgaaag ctccgaaaac gccttgcgca
      781 tcagcctgtt tgacgacgaa atcgaccgcc tcgatatgtt cgacccgctt tcaggcagcc
      841 ttatccagcg cgtcggccgc tacaccgtct tcccgtccag ccattacgtt accccgcgcg
      901 ataccgtctt gcgcgcctgc gagtccatca aagaagaatt acgtgaacgc attgatttct
      961 ttaccaaaga aaaccgtccc gtcgaacaac aacgcatcga acagcgcacc cgctttgacc
     1021 tcgaaatgct ctacgaaatg ggcttctgca aaggcatcga aaattactcc cggcacttct
     1081 ccagcaaaaa agaaggcgaa ccgccgccca cgctgatgga ctacctgcct gacaacgcca
     1141 tcatgttcat cgacgaaagc cacgttaccg tcacccaaat cggcggcatg tacaaaggcg
     1201 acgcatcgcg caagcaaaac ctcgtcgact acggcttccg cctgccttcc gcccgcgaca
     1261 accgcccgct caaattccat gaatttgaaa aagtcatgcc gcaaactgtc ttcgtttccg
     1321 ccactccagc caaatacgaa gaagaacacg ccggacaagt ggtcgaacaa gtcgtccgcc
     1381 ccacagggct ggtcgacccc caaatcatca tccgccccgt cgccacccaa gtcgacgact
     1441 taatgagcga aatcaacgac cgcatccaaa aaggcgaacg cgttctcgtt accaccctca
     1501 ccaaacgcat ggcggagcaa ctcaccgact attacagcga actcggcatc aaagtgcgct
     1561 acctgcacag cgacattgat accgtagagc gcgttgaaat cattagagat ttacggctcg
     1621 gcctgtttga cgtactcgtc ggcatcaacc tcttgcgcga aggcctcgat atccccgaag
     1681 tctccctcgt cgccatcctc gacgccgaca aagaaggctt cctgcgctca caccgcagcc
     1741 tgattcaaac cataggccgc gccgcgcgca acgtgaacgg cgtcgcgatt ctgtacgccg
     1801 acaaaatcac cgactctatg aaagccgcca tcgacgaaac cgaacgccgc cgtgaaaaac
     1861 aaattaaatt caacgaagaa cacggcatcg tgccgcaaca gattaaaaaa caggtcaaag
     1921 acatcattga cggcgtgtac cacgaagaag acggtggtaa aggccgtaga caaggcaaaa
     1981 acaaggttaa agtcagcgaa attcacaacg aagaagacgc ggttaaagaa atcgccaaac
     2041 tggaaaaagc catgcagcag gcagctaggg atttgcagtt tgaagaggcg gctgtactga
     2101 gggataggat acgggggatt aaggaagggt tgttgtttgg gagtgagtaa taaaagcact
     2161 tgaaagttta gttgatgacc acaatgttct taaaagatct ggagaaacaa aagatgtgga
     2221 gaaacatcgt aacttgatca attacattct gaggactgaa aatgacatat tcttttcgtg
     2281 tagaaaatat aaatgatata tctgatattc ctgaaaatca tttggaaata gttagagctg
     2341 ctctgcctag taatagaagt aatgccttat ctcgtgagcc agatggggca caagctgttt
     2401 ttgtttatga aattgatggt gaatttagag ctaagttatt tgaccgcata aaagatacag
     2461 acagttattt acaagcaaca gaggataatt actctaatga ccctcgcagt ataggagtag
     2521 tatacgtttt ggagcaacag caagggtagc ctgagggccg cacaaactct caagctgacg
     2581 tgcagtatgt gtgatacgca cgcatgcgtt ttttcgttca aaccattgtt ttaaaccttg
     2641 tatcgaaaca tcactcgctg ctttatcttg aaaaaatgcc gtctgtaagc aaacatgctt
     2701 caaacagcat ttttttatcc ggcggtttgt tagcccatcc gtttgaatac caagtcccaa
     2761 acgccgtgcc cgaggcgttt gccgcgcgct tcgaatttgg tttcggggcg gtagtccggg
     2821 gtgggggcgt agtctgccgc cgtattttgc aggctgtcga agctactgag gacttcaagc
     2881 atctgccgtg catattcttc ccagtctgtc gccaggtgga tatagccgcc ggttttgagt
     2941 ttgggcagca gtttggcgat gaagggggct tgtatcagac ggcgtttgtg gtggcgtttt
     3001 ttgtgccacg ggtcggggaa gaatatgtgg atgccgtcga gcgagccgtc ttgcagcata
     3061 ttttcgataa cttctacggc atcgtgccgc atcacgcgga tgttttccaa atggttttcg
     3121 ttgatgagtt tgagcagatt gcctacgccg ggaccgtgta cgtcgatggc gaggaagtcg
     3181 gtttcgggca ggcggcgggc gatttctgcg gttgccgtcc ccataccgaa gcctatttcg
     3241 aggattttgg gtcggttgct tccgaaattg gcatcaagat cggccggtgt tgcttggtaa
     3301 tcgatgccga agctgtccca taaggtatcg atggcgcgtt gctgtgcggc ggtcatatgg
     3361 ctttggcgga ggacgaagct gcggatgctg cggggatgtt cggcttgcca gttgttttgt
     3421 gtttggtttt cggcggtgtc tgtcataatg cttccgtgcg cttgtgcaat caggatgccg
     3481 tctgaatgtg aaaggcctgt tcggacggcg ggaagggaaa ggggcgatta tacctgtttc
     3541 gtttcggcag ggtaggtgta acgctgttca gacggcattt tgccattgtt gcagcagttc
     3601 ttgcaggacg cttttttgcc cgtatccgtt gtttatggct tcttgcaggt agcggcaggc
     3661 tttttctttg tccggcccga caccgtgtcc gctgtaatgg atgcaggcga ggttgtagaa
     3721 cgccatactg tctttttgcg cggcggcttg ttcaaaccat ttgcgggctt tgccgtagtc
     3781 ggcggctatg ccctgtccga agtagtacat actgcccaga ttggtttggg ctttgctgtg
     3841 tccgagttct gcggcttctg tgtagagttt gagcgcggct gcgtattcgg gcgcacattg
     3901 taatccgtaa tgcagggctt gggctttttg ataaagctgt tctgcccttt gccgcctgat
     3961 ggcggaatct ttgatgccgc cgtattggtc gggatggttt aacgcgctgt cggatatgag
     4021 tttctgatag gcggaaaggc tgccggcttc ggctgcctgc cggtaataat gccgggcttt
     4081 ttccgtatcg ggggctatgc ccaaaccgta gcggcagatg tcgcccagta tccgcaaacc
     4141 ttcgggatgg cgttctgctg cggctgcttc ggcatgatgc agggcaagtt tgtggtttct
     4201 ttcctgatat ttgccttgta ggtagatgtc ggccagtgcg gcatgggaat cggggtcatt
     4261 ttcctgtgcc gcctgttgga accggtaaac ggcttcatcg ggagccgtag gtaggatgag
     4321 ttcggcaagc ggggtgtagg cgggaatgta tccttgttgc gcggcggcgc gcaaatgatt
     4381 gacggcctgt gccgtgtcga ctttcgtccc ttgcccgaaa cggtattgca gcccgagctg
     4441 ccaatgtgct tccggcaagc cttgtgccgc cgcttttcgg tagagcaggt gcgccgtttc
     4501 aaaatccggc ggtgtgccgt accggcagta ttgggcgagc agatattgtc cgtgggggtt
     4561 gttgtttttt gcgctggttt ttgcccattc gagtgcttct tcaaaatgcc gggacgcgta
     4621 cagcaggtac atcaggcgga cttgcgcttc gggcactcct gcttctgccg gaggcctgta
     4681 aagcgatatc agggtttcag gggggcgcgc cttccaattc ttggatatat gccagattgt
     4741 aacgcgcgta gggatgcccc tgttcggcgg cgatgcggag catttccata ccttgttcgc
     4801 ggtcttggta ggggctgtcc gcatccatca ggtgttttgc caactcgaat gcggcggcgg
     4861 gatgacctgc caaggccgct tctgtcagca gtcggcggac ttcggtaaag ttatattgtt
     4921 tttgagaaag gcattctaag gtctgccgat agggtaagtc gggattgttc atatcagatc
     4981 gttttccgtt ttgtcgaatc atcgttatat gttatgaagt taggtttata tcggcacgcg
     5041 ggcctgctgt atcatatttt tacagacggt ttttgttttg gcggcatact aatgcagatg
     5101 attataaatg gtttccgcca atgccttgct gatgccttcc actttttcca agtcctcgcg
     5161 gctggcggca atcacgccgc gcaggccgcc gaagcgggtg agtagggctt ggcggcgttt
     5221 gctgcccacg ccggggatgt cgctgaggga cgaggtaacg cgtgctttgt cgcgtttttt
     5281 acggtggcct gtaatggcaa agcggtgtga ttcgtcgcgc acggtttgca gaaggtgcag
     5341 ggcggggctg tgcgggggta ggcggaagac ttcgccggta aaaggcagta tgagctcctc
     5401 cataccggct ttgcgctccg ggcctttggc gataccgacc aaaggaatgt gcagcccgag
     5461 ttcttcccat accgatacgg ctacgccgat ttgccctttg ccgccgtcaa ttaacacggc
     5521 atccggccat ttgacggtct cgccgttggc ttcggcctcc tgcattttgc cgtaacggcg
     5581 cgtcaacact tcgcgcatag cggcgtagtc gtcgccgggt ttggcggtcg tgatgttgta
     5641 gcggcggtat tgcgaaggct ggatgttttg ctcatcgtac acaacgcagg acgcaatagt
     5701 ggcttcgcct tgtgtgtggc tgatgtcgaa acattcgagg cggttgaggc cgtctgaatc
     5761 cataccgagg attttggcga gttcgtcgat gcggtgttgc tggctgcttt gttgcaggcg
     5821 gcgttgtgca atcgccattt gtgcgttttg ttccgccatt ttcaaccaga ctttgcgttc
     5881 gcctatggtt ttggtgacaa attgcatctg cttgccgtgt tcgccttcca aagcctcttt
     5941 cagcgcatcg ggaacggaaa agttgctaat aatgatgtcg ggtttgcttt tgcccaaata
     6001 atgttgggcg acgaaggctt cggcgtaatc ttgtccgttt ggatcgggat cgtttttggt
     6061 gtcggggaaa aagcttttgt cgccgacgtg ccgcccaccg cgtatgctga cccagtgtac
     6121 gcagacgatg ccgtctgaaa ccgccagcgc gagcaaatcg atatcgttgg ggttgttcgg
     6181 gtttttgctg tcgatgaact ggttgctctg cataatgccg agtgcttgga tttggtcgcg
     6241 gtagcgggcg gcttcttcaa attgcagatt cgcggcggca gtttgcattt tgtgttgcag
     6301 ggtgcgggtc agttcgtcgg ttttgccgtt gagaaaagtg gcggcttgac gcacgctgtc
     6361 gcggtagtct tcttcgctga tgtgtccgac gcagggcgcg gtacagcgtt tgatttggta
     6421 cagcaggcaa gggcggtcgc ggtgttcgaa cacgctgtct tcgcaggtac gcagcataaa
     6481 gactttttgc aggacttgga tgctgtcgcg cacggcgttg ctgttgggat acgggccgaa
     6541 gtattggttg ggctttttca gcgtgccgcg gtaatacgcc atttgcggat attgatggcc
     6601 gctgagcatc agataaggat agcttttgtc gtcgcggaaa agaatattgt atttgggcga
     6661 cagggctttg atgaagttgt tttcgagaat cagggcttcg gattcggagc gggtgatggt
     6721 ggtttcgatg tggcgaacct gttttaccat caatgcgatg cgcggcgaat ggtcgttttt
     6781 ttggaaatag ccggacacgc gccgcttgag gttgaccgct ttgccgacgt ataagacttt
     6841 gccgccttcg tcaaaaaaac ggtacacgcc cggcagcttg ggcaggtttt tgaggaagag
     6901 cgggatgtcg aattgttccg gagaacggtt ttctgtattc atatcaatca tttgaaaaac
     6961 ggcttcagac ggcatatcgg cagcggcagc cttatccgtt cggaaaagct gtcgggtggt
     7021 tatatgcggt caatcgattt ttacccgttt caggcgcaag gcattgctca acacggaaac
     7081 cgagcttgcc gccatggccg cgcctgcgat gacgggattt aaaaagccaa gcgcggcgag
     7141 cggaatgccc aagctattgt agaagaaggc gaaaaacagg ttttgcttga tgtttttcaa
     7201 agtggcttgc gacaccagca gggcatcggc gagctgatta accgaatgct gcatcagcgt
     7261 ggcggacgcg gtgtgttcgg caacgtccgc accgcctttc atggcgaagc tgacgtttgc
     7321 ggcggcgagc gcgggcgcgt cgttgatgcc gtcgccgacc atcgccacgg ttttgccggc
     7381 ggctttgagt ttctgcactt cggcggcttt gtcgcgcgga ctcatattgc cgaaggcgtg
     7441 agcgataccc agttgttggg cgacgtattc gaccgtgcct tggttgtcgc cgctcatgat
     7501 gtaaacatcg atattgtgtt ttttcagacg gcctatggct tcggcggtat cggctttcaa
     7561 cgcgtcggca agtgcgaatg caccgatagg tttgttatcg actgagactg caacaatgct
     7621 tgcaatgtcc caaacgccgt ctgaaaactc gggcaaggtc agttcggcaa attcggcttt
     7681 gcccgctttc accaatcccg cacgttccac ttcggcggca atgcctgcgc cgacaacggt
     7741 ttgcgcgttt tgtgcggcgg gaatctccaa accgcgcgct tgggtggcgg aaacgatggc
     7801 tcgggcaagc ggatgggcgg cgttttgttc gacggcagcg gcgatgcggt acaaatcgtc
     7861 ttcgtcaaag ccgctgtcgg gaacacaata aacggcggca acctgcggcc tgccttcggt
     7921 cagcgtgcca gttttgtcca acacaacggc atcgacgtgg gcggcttctt ccattgccgc
     7981 tgcgtcttta aaccaaatgc cgtgtttcac tgctttaccc atgccgacca taatcgcggc
     8041 gggtgtagcc agaccgagcg cacacgggca ggcaatcacc aaaacggcga cggcgtgcat
     8101 cagcgcaacc gtccaatcgc ccttaatcag ccaagtaaca ataaaagtca acaacgcgat
     8161 gcccacgacg gcaggcacga acaccgccgc cgccttgtcc gccacgcgcg caatcggtgc
     8221 tttactgcct tgcgcttcag agagtgcgtt catcatgtcg ccgagcaggg tttggctgcc
     8281 gagctgcgcg gcgcggtaca ccacgctgcc ttcggtcatc agcgcgcccg ccaacacttt
     8341 gccgcccgcc tttttctctt cgggattgga ttcgccggta agatggctct cgtccgccca
     8401 gccgctgccg ctttcgataa cgccgtcggc ggcaatgcgt tcgccgtggt tggcgcggat
     8461 aaggtcgccg atttgcactt ggtcgatggg aagctgtttc cattcgccat cgcgctgcac
     8521 gttgacttgg gtcggcgtga gtttgagcag caagcccaag ctgttcaggc tggatttttt
     8581 ggtacggtgt tccaaaaatt tgcccagcga cacaaaacca atcaccatca cgcccgcttc
     8641 aaaatacacg tgcgccattc cgtgtgccgc gtgcggactg aaaaacaaca tataaacgga
     8701 atacaggtaa atcgacaccg tgccgatagt aaccagcacg tccatattcg ccagcccgcc
     8761 tttaatgctc gcccacgcgc ttttgtaaaa cgggattgcc agccaaagtt gcacaatgct
     8821 tgccagcgca aactgccaca acggcggaat catccaatcg tgcctaccga tcatcatccc
     8881 cgccataccg acaaggaacg gaatattgat ggcggacagc agccacagcc gccagccgat
     8941 atggtgttct gcttcagctt gcggcaatgt atcttccgtt ttttccttcg cgccgtaacc
     9001 ggttttctca atgattttgg caatgtcggc tgcggaagtt ttgctgtcgt caaacgtaac
     9061 ctgcgcctcc tcgctggcga agttcacccc cgccgattcg acaaagtctt ttttgttcaa
     9121 cactttttca atgcgcgaag cgcaggcctg gcaggtcatg ccttcgattt ggaaacggat
     9181 tttttgttgc ataagcgtga ttcctgcttt gatattcaga cggcagttaa ggctgcggga
     9241 tgccgtctga gcgccggtat ggtcaaaatt tctcaaacgc gccgataatt cgagtagaat
     9301 ccgaaaactt gacacagcaa aggaaaaaca atgtcccaac accgcaaact gattattttg
     9361 ggttccggcc ccgccggata caccgccgcc gtctatgccg cgcgcgccaa tttaaacccc
     9421 gtcattatta caggtatcgc gcaaggcggg caactgatga ccaccaccga agtggacaac
     9481 tggcctgccg atgccgacgg cgtgcaaggg ccggaattga tggcgcggtt tctcgcccac
     9541 gccgaacgtt tcggaacgga aatcattttt gaccaaatca acgccgtcga tctgcaaaaa
     9601 cgcccgttta cactcaaagg cgatatgggc gagtacactt gcgatgccct gattgtcgca
     9661 acaggcgcgt ccgccaaata cctcggtttg ccgagtgagg aagcgtttgc agggaaaggc
     9721 gtttccgctt gtgccacctg cgacggtttc ttctacaaaa accaagatgt tgccgtagtt
     9781 ggcggcggca atacggcagt tgaagaggca ctctaccttg ccaatatcgc caaaaccgtt
     9841 accctgatcc accgccgcag cgagttccgt gccgaaaaaa tcatgatcga caaactgatg
     9901 aaacgcgtgg aagagggcaa aatcatcctc aagctggaaa gcaacctgca agaagtactg
     9961 ggcgacgatc ggggcgtaaa cggcgcatta ttaaaaaaca acgacggttc tgagcaacaa
    10021 attgccgtca gcggcatttt tatcgccatc gggcacaagc cgaataccga tattttcaaa
    10081 ggtcagttgg aaatggacga agccggttac ctgaaaacca aaggcggcac ggcggacaat
    10141 gtcggcgcaa ccaatatcga aggcgtatgg gcggcgggcg acgtaaaaga ccatacctac
    10201 cgtcaggcga ttaccagcgc ggcttccggc tgtcaggcgg ctttggacgc ggaacgctgg
    10261 ctgggcagcc aaaacatttg aatgccgtct gaaaccgaaa ttttcggcgg aatgcaaatt
    10321 tttcgcacca aatccttgat tccgtcggca aaccccaata taatgcctgc tctttgaacc
    10381 ttgccttctg ctttcgcatg gcagaaggct gttttaccat ccataaggag ataacatgcg
    10441 tcattacgag atcgtgttta tcgttcatcc tgatcaaagc gagcaagtgc ctgctatggt
    10501 tgaacgttac aaaaccatga ttgccgaagc aaacggtaag attcaccgtt tggaagattg
    10561 gggtcgccgc caactggctt acccgattaa caaaatccat aaagcccatt acgttttgat
    10621 gaacatcgaa accactcccg aagtggttga agagctggaa accgcattcc gcttcaatga
    10681 tgccgtattg cgccatctaa ccatcaaaac caaacacgcc gttactgaag catcccctat
    10741 gttgggtggt gaaaaggcta agaacctgtt gagcggtgcg tctgaagaag cggtcgccca
    10801 ataattggga ttcaataatc ttgtttcgct tgccgcgtta attgaaaagg ttttccctat
    10861 tcgatatacg cctgccggaa tccctgtttt agatattatt ttaaagcacg aatcgtggca
    10921 ggaggaaaac gggcagcaat gccttgtcca attggaaatt ccggcacgga ttttaggcag
    10981 gcaggcggaa gagtggcagt atcggcaagg tgtatatgtt cacgtcgaag gttttttagc
    11041 tcaaaaaagc agacgttccc ttatgccgat gctcaggata caaaatattc aagaatataa
    11101 aggttaaacg acaatggctc gtcaatcatt caaacgtaga aaattctgcc gtttcacggc
    11161 tgaaaaaatc caagaagtcg attacaaaca agttgatttg ctgaaagact ttatctctga
    11221 aaacggtaaa atcattcctg cacgcatcac aggaacgaag gcattctacc aacgccaatt
    11281 ggctgttgcc gtaaaacgcg cacgcttcct ggctctgctg ccttacaccg accaacacaa
    11341 ataattttgg agattgaatc atgcaaatta ttctgttaga aaaaatcggc ggtctgggca
    11401 acttgggcga tatcgtaacc gttaaaaacg gctacgcccg caactttcta attcccgcag
    11461 gtaaggcaaa acgtgcgacc gaagcgaata tgaaagagtt tgaagtacgc cgcgccgaat
    11521 tggaagccaa acaggctgaa attttggcag atgcccgagt ccgtcaggaa aaattggacg
    11581 gtcaaaccgt taccgttgct caaaaagccg gtgtggacgg tcgcctgttc ggttccgtta
    11641 ccaatgccga cattgctgct gcaatcgttg ctgccggcat cgaagccgtg aaagcaaatg
    11701 tacgtctgcc gaacggtcct ctgaaagccg ttggcgagta cgaagtggaa gtggctttgc
    11761 acactgatgc cgttgctaaa attaccgttg ccgtcgttgc cgcaaccgag taattgaaat
    11821 tatcagatgc cgtctgaaac cctgccgatt gtcggaatgt ggtttcagac ggtatttgtt
    11881 ttgttttccg tatattctgc aaaagtcggg atggttgttt ttatagtgga ttaaatttaa
    11941 accagtacag cgtacctggc ttcaatatac tcaataggat aggtctcttc ctaaccgaaa
    12001 aaataattgt cttttccctt gcaaataatt gaaatcaaca gattactaaa acacagccaa
    12061 aatattcaat tgacaaaaac ttttctgatt ttgagaaatc tgtgaaaatc aggggattat
    12121 ttattttgaa aatggtatcg ggcataaaat ttggctgtgt ttcaatatgg tgctgataac
    12181 atactttgtt tcaaaatgtt caataggata acttcctgat tgaccgaaaa ataatggcct
    12241 tttcccttgc aagcagttga aatcaacaga ttgtcaaaat acatcctaaa aatttaataa
    12301 cttatatata tgattgcaaa ggttgcggct tgtatgccgg tcattatggc ggaaataccg
    12361 tttgggaggc agccgcatcg cgtggaatcg gcacggcagg cgatgcgccg atgccttcgg
    12421 gcgtgaaggc ggggcaatcg gcagtttgga aaaaggcaat ggaatctgtg ggcagaagaa
    12481 gttaagggta aaagtcgggc gcacggtcag gttgtctgtc cttttgtcgg aacaggagac
    12541 tgggcagctt tgtcctgatt aattgcttgt gcaaacggta aaaaggtttt ttcgtgtgtt
    12601 ttaaagcagg ttgtacagca tttttccggc aatcaaaagc agcataatgc cgaaggattt
    12661 tttgagtttg gcagaagaaa gtttgtgggc ggttttgaca ccgagcgggg caaaggcaat
    12721 ggttgccgcg ctgaggacgg cgacggcggg caggtaaagg aagcccagtg acccttcggg
    12781 caatcctgca atattcaggc cgttgagcag atacgatatt gcgccggaga gtgcaatcgg
    12841 ccaggcaagg ccggatgatg tgccgatggc tttatgggcg gggaagccgc agtggattaa
    12901 gaaggggacg gaaagtgaac cgccgcctat gccgacccag ctcgacattg tgccgaacag
    12961 tgtggaaacc gcagtcagtc cgggcagctt gggcagcggg cgggatgccg tctgacgacc
    13021 ggtatgcagt gttttgaatg cgacggcggt taaaaacagg ataaagaaaa tttgaagccc
    13081 gaacgcgggg atatattttg cggagagtgc gcccgtgaat acgccgaata tcatacccgg
    13141 catcatcgca aatacggttt tccagtcgac cgcccgtttt ttgtgctgcc ccaacatact
    13201 ggaaaaggcg gtgaagacca tgacggcgaa ggatgtgccg acggcgaggt gttgcgcgta
    13261 aggatgttgt gccaaaccct gcaaatcaag cacccataaa acgacaggga caatcagcgt
    13321 gccgccgcct acgccgaaca gaccggcaat aaaacctgcc gcactgccta cggcaagcag
    13381 gattaagata atgtcccaat gccacattta atccgccttt ctgtattttt tccaaaatcg
    13441 gcgtgccgcc ataatgtagc cggacaggct gtatccgaga aagaacagga agaggacgag
    13501 cgacggttcc caagtgacca gaagcagcag taagacggca agcagcattc cgacaaaggg
    13561 gacttgtctg cggatgttga tttctttaaa actccaaaaa gggatttgga caatcatcga
    13621 caggccggca aacagtgtga tgcccaatgc ccaccagtgg acggcgggga atttttcgac
    13681 gctgtggttg acccaaatca gcccgacaat cagcgcggcg gcagtcggac tgggcacgcc
    13741 gataaaccag cgtttgtcca ccttgccgat gagtgtgttg aacagggcga ggcgcagggc
    13801 ggcgcaggcg cagtagatga aggcgacgga ataaccgatt ttgccgaact gccaaagctg
    13861 ccatttgtag gcaatcagag cgggagcaac gccgaagctg accatatcgg caaggctgtc
    13921 gagctgctcc ccgaacgcgc tttggctgtt ggtcagccgc gccacgcgcc cgtccatacc
    13981 gtccagcaac atagagatga ataccgcgat ggcggcggtt tcataacgtc cgtgcatgga
    14041 ttgggtgatt gcataaaatg cggaaaacag cgcggcgatg gtaaaggagt tgggcagcag
    14101 gtagatactg ttttgacgca gggagcgttg cggggtgttg gtcggggttt ccatagctga
    14161 agtgtctcac ggacgtggag aatcgatagg ggattataac ccaaaccatt atcgaacaat
    14221 acgcccttta ggatgaagcc ctcggaggcg gtttgttttt ctgatggcgg atgctttgcg
    14281 gggcggtttg actctgcctg ccaccgggtg tgttgtttcg gatttttgcc ggatggatat
    14341 tgttgccggg catttctggg cttgccggaa ggtatcgggg ggagggcatc ggaatatgcg
    14401 gcgcaccgtt caaaccgggg cggcgtttcc ctattttcag ggggttgcag gtttcaacaa
    14461 attgaaagat attttttgca tttccgaccg tatgctgatt ttgaagcggg ataaattata
    14521 ggacaaggtt tttcgcccgc cgcaaaggtt ggccgcaatg ccgtctgaaa acaacggctt
    14581 gccgctaagg cggcggtatg cggatttgcg ctgccgaaat cggtttgcca tacccggcgg
    14641 tgcaatctgc ggggagggat aagccgataa ggcgggactt atcctgtttt ttgtttataa
    14701 tgcaacagaa tttggacgaa ccgtcgggaa tttatcatga tgaaaaagat actggccgta
    14761 tcggcactat gcctgatgac tgcggcggca cgggctgccg atacttacgg ctatctcgcc
    14821 gtttggcaga atccgcagaa tgcggacgat gttttgcagg ttaaaaccac aaaagaagat
    14881 tcgacgaaaa gcgaagcgtt tgccgagttg gaagccttct gcaaaggtca ggacacgctt
    14941 gcgggcattg ccgaagacga gccgaccgga tgccggtcgg tcgtgtcgct gaacaatacc
    15001 tgtgtcgcgc tggcataccc gaaagccttg ggcgcgatgc gcgttgaaaa cgccgtcgtg
    15061 attacttctc cgcgttttac gagcgttcat caggtcgcac tcaaccagtg catcaaaaaa
    15121 tacggcgtac agggacaatg cggcttggaa acagtgtatt gcacatcttc ttcttattac
    15181 ggcggaactg tgcgctcttt gattcaaaat ctcaaataaa acggaaaatg ccgtctgaaa
    15241 gatgttcaga cggcatttct atatcgacgg tcaggattct ttcggatcgg gcagcaggct
    15301 gttcaacata atggcaagta cggcgcacaa gcccacgccg gcaaagctga agctgcccaa
    15361 tttgagcgtc atgccgccga tgcccgtggt cagtaccgag ctgacgatga ccaggttttt
    15421 cggcagcatc aaatcgactt tggcatcaat caacgttttc acgcccaaag aagcaatcgt
    15481 gccgaacagc agcagcataa tgccgcccat tactggcatc ggaatggaag ccaaaaacgc
    15541 attgaatttg ccgaaaaacg ccatgcagac ggcaaaaacc gccgcccaag tcatgatgac
    15601 ggggttgctg tttttggtaa tcatcaccgc acccgttact tcgccgtagg tcgtaaccgg
    15661 cgggccgccg atcagacccg caacgcatac gcccaaaccg tcgcctgcaa gggttttgtc
    15721 caagcccggg tctttcgtat agtctttccc cgtcacattg ccgattgcca tgatgccgcc
    15781 gatgtgttcg atggcggggg cgacggcaac gggcagcata aacagtgcag cctgccagtt
    15841 gacctgaggc gtttcaaaat ggggaacggc gaaccagggc gcgtgtgcaa tgcttgccgt
    15901 gtccaccagt cccatcagca gtgccaaaac ataacccgaa gcgacaccga tcaagatggg
    15961 aatcagcttc atcatcctgc tgccgaaaac cgatacgatg gcggtaacgg caaaggtaaa
    16021 gccggaaaga atcagcgaat cggtatagtc gatgacctgt ttgccgtccg cctgacccat
    16081 tgccatgctg cttgccgcca cggcaacaga cagaccgatg accatgatga cggggccgat
    16141 gacgaccgga ggcagcagtt tgtgtaccgc tgccagtccg cgccaacgga tcagcgcggc
    16201 aaacacaaaa tacataaagc cggcggtaaa cagtccgaac atggtggaag gcagccccca
    16261 ttcgccgacg gagtagataa tcggtgcgat aaaggcaaac gaagaaccaa gaaaaatcgg
    16321 cactttgcgt ttggttgtga tttggaacag cagcgttccc aagcctgcgc ccaaaagcgc
    16381 aagagccgga ttcagaccgg tcagcagggg aaccagcacc attgcgccga atgccacaaa
    16441 taaaatctgc gcgccggaaa cggcaagttt cagttggttc ataccatctt ctttcaatcg
    16501 gttcaaacgg cacggattat actggtttgc cgagggtctg cgtaaaaata catatggcgg
    16561 gcaacagata tgccgtctga aaggcaatgt ctgtctgttg caggatgaaa gcaggagaaa
    16621 tggagtataa tccgacactt tccatattca atccgcaagc cgtccggctt ccttatttca
    16681 gacggcattt tccggtaata cggcatgaca gaaaaatccc ataaaaaaac agcaaaaggc
    16741 agggcgggaa gcccgtcccc aacgtccgca cgcaacaaga aagccgacaa cggcgcacgg
    16801 ggcaataaag tttccgagcg gctcaaggcg gtcaaagagt tgcagaaaac cgaaaccaaa
    16861 aaggcgcgtc ccgaacatgt cgtcaacctt atcggcgacg cactgtggct gatgggtttg
    16921 gcggcaaccc tgtatttggc gatttccctg atcagtttcg atatgggcga tccgtcttgg
    16981 tcgcacagtt cgccggttgt ggaagatgtc gccaattggg gcggactgtt cggcgcgtat
    17041 gttgccgatg tcggctatta tcttttcggc tggtcgttct ggtggtggat agcggctgcc
    17101 tgcgtcatgc tgtataaaaa ttttcgtctg cacgcaaaac agacggaaaa cgaggcatac
    17161 aaccacaaaa tcgctgccgc cgcgctgttt gtcctgacgg tcttcagccc cgtcttggag
    17221 tattttgtgc tgggcggaaa atatgccgac tccctgcctg tcggagcagg cggtatggtc
    17281 ggcatacgcg tcggcgcagt gtttgcgtgg ctgctgggga aatcgggcag cctgctgatt
    17341 atcttggttg ttctgctgtt gtcgttgtcc ctgctggtgc agatttcatg gctggaattt
    17401 ttgaacggtg cgggcagggc ggttcaaaac cgcctgagtg ccttatccgg caaggtcatg
    17461 gctttaggaa aacgccggcc gaatagcaaa acagacggtg tcgataccca aaatacacgg
    17521 cgcatggtaa aagaagccaa gaatattacg gccaaacccg ttgccttgcc cgaaggcagc
    17581 agcagcaacc gcaaatccgt cgcggtttcc gtcgcgccgt cgcccaaaat tcaggtttct
    17641 ctgtttgaag atgacgaacc tcggcaggcg ggcgaatacc acaagcctac attgaaccta
    17701 ttgcggattc ctgacagcga acccgtcagc atcaatcccg ccgaattgga gcgcactgcc
    17761 gaactgatcg aatccaaact ggcagaattc ggcatcggcg tacaagtcgt atccgccaca
    17821 tccggtcccg tcatcacgcg ctacgaaatc gaacccgcgc aaggtgttaa aggcagccaa
    17881 attgttgcct tgtcgaaaga tttggcacgc tctatgtcgc tgcaatccgt gcgtatcgtc
    17941 gaaaccatcg caggtaaaaa cacgatgggc atcgagttgc ccaacgacaa acgccaagac
    18001 gtgatgttga gcgaaatctt gtcctcgccc gtgtttgccg aagccaaatc caagctgacc
    18061 gtcgcgctgg gcaaagacat tgccggtacc cccgttgtcg gcgacttggc gaaaatgccg
    18121 caccttttgg tcgccggtat gactggttcg ggcaagtccg tcggcgtgaa cggcatgatt
    18181 atgtctatgc ttttcaaagc tacgcccgac gaagtccgct ttatcatgat agacccgaaa
    18241 atgcttgagt tgagcattta cgacggcatt ccgcacctgc tctgtcccgt cgtgaccgat
    18301 atgcgcgaag cggggcaggc gttgaactgg tgcgtcgccg aaatggaaaa acgctaccgc
    18361 ctgctttccc acgccggtgt acgcaatctg gaaggcttca accaaaaagt cgaagccgca
    18421 aaagcggcag gcaagccgct gctcaatccg ttcagtctga accccgacag ccccgagcct
    18481 ttggaaaaac tgccgatgat tgtggtcgtt atcgacgaac ttgccgacct gatgatgacc
    18541 gaacgcaaag ccgtcgagca gcaaatcgcc cgtctcgccc aaaaagcgcg cgccgccggt
    18601 atccatatga ttgtcgccac ccaacgtccc agtgtcgatg tcgttactgg cctgattaaa
    18661 gccaacatcc cgacgcgtat ggcgtttacc gtgcaaagca aaatcgacag ccgtaccatc
    18721 ctcgaccaaa tgggcgcgga cgaactgctc aaatatggcg attcgctgtt cctccagccc
    18781 ggcagtgccg aaccgacccg cctgcaaggc gcgtttgttt cagacgacga agtacatcaa
    18841 gtcgtcaact acgtcaaatc gcaagcccca gccgactata ttgaaggtct gctcagcggc
    18901 gaggccgcgc tggaaactgc caatatcgtt aatccgaatg cagacagcga cgaattgttc
    18961 gatcaggcag tcgcctatgt tttggaaagc aaaaaaacct ccatttcgtc tttgcagcgg
    19021 cagttgcgta tcggctataa ccgcgcggca aacctgatgg aggcactgga aaatgcgggt
    19081 gtcgtttctc ccaccgacct caacggcagc cgtaaaattt tggcgcacaa ggaccatttg
    19141 tagctcgtat tgcaaaatgc cgtctgaacg gcggaattgg cgtttcagac ggcatattat
    19201 gtttcaggcg gaacattgtg atatacttgc cagctaaaat ctcccctttg cggcaatgcg
    19261 gttcaaatat ccgtaccgtt gcgctgtttg cttccccatg cagggaagaa agtttaccat
    19321 tttatcaaca caacaaattt aagggcttat gatgagcgta actgttgaaa ctttagaaaa
    19381 tctggaacgc aaagtagtgt tgtccctgcc ttggtccgaa atcaacgcag aaaccgataa
    19441 aaaactgaaa caaacccagc gccgtgcaaa aatcgacggt ttccgcccgg gtaaagcacc
    19501 tttaaaaatg attgcccaaa tgtacggtgc gagcgcgcaa aacgacgtga tcaacgagct
    19561 ggtgcaacgc cgcttccacg atgttgccgt tgcccaagag ttgaaagtgg caggcttccc
    19621 ccgttttgaa ggcgttgaag aacaagacga taaagaatct ttcaaagttg ccgccatttt
    19681 tgaagtgttc cccgaagtcg ttatcggcga tttgtctgca caagaagttg aaaaagtaac
    19741 cgcttccgtc ggtgatgccg aagtggacca aaccgtagaa atcctgcgca aacaacgcac
    19801 ccgcttcaac catgtcgaac gcgaagcccg aaacagcgac cgcgtcatca ttgactttga
    19861 aggcaaaatc gacggcgaac cttttgcagg cggcgcatcc aaaaactacg ccttcgtatt
    19921 gggcgcaggt caaatgctgc ctgaatttga agccggcgta gtcggcatga aggctggcga
    19981 aagtaaagac gttaccgtca acttccctga agaataccac ggcaaagacg ttgccggtaa
    20041 aactgccgtg ttcaccatta cgctgaacaa cgtttccgaa gcgactctgc ctgaagtcga
    20101 tgcagatttt gcaaaagcct tgggtattgc ggatggcgac gttgccaaaa tgcgcgaaga
    20161 agtgcagaaa aacgtaagcc gcgaagtgga acgccgcgta aacgaacaaa ccaaagaatc
    20221 cgtaatgaac gcgctgctca aagccgtaga gctgaaagca cctgttgctt tggtcaatga
    20281 agaagccgca cgcttggcaa acgaaatgaa acaaaatttt gttaaccaag gtatggctga
    20341 tgctgccaac ttggatctgc ctttggatat attcaaagaa caagccgaac gccgcgtatc
    20401 tttgggtctg attttggcca aactggttga tgaaaacaaa ctggaaccga ctgaggagca
    20461 agtcaaagcc gttgtcgcca acttcgcaga aagctacgaa gatcctcaag aagtaatcga
    20521 ctggtactac gcagagcctt cccgcctgca agccccgact tctttggcga tagaaagcaa
    20581 cgtcgttgat ttcgttttgg gtaaagccaa agtaaacgaa aaagctttgt cttttgacga
    20641 agtgatgggc gcgcaagcct gattatcctg aaaatgccgt cttagggcag tttttgaaag
    20701 caccgaagcc gcttttaaag cccgctttgg tgcttttaca tcatgaaagg agacgaaatg
    20761 tcttttgata actatcttgt ccctaccgtt atcgagcaga gcggtcgcgg tgagcgtgca
    20821 ttcgatatct attctcggct tttgaaagag cgcatcgtat tcttggtcgg cccggtaacc
    20881 gacgagtccg ccaatctggt ggttgcccaa ctgttgtttt tggaaagtga gaatccggat
    20941 aaggatattt tcttctatat taactcgcca ggcggttcgg taacggccgg tatgtcgatt
    21001 tacgacacca tgaattttat caagcccgat gtatcgactt tgtgcttggg gcaggcagca
    21061 agtatgggcg cgttcttatt gtcggcaggc gaaaaaggca aacgtttcgc cctgcccaac
    21121 agccggatta tgattcacca gcctttaatc agcggcggct tgggcggtca ggcatccgat
    21181 attgaaattc acgcacgcga actgttgaaa atcaaagaaa aactcaaccg cctgatggcg
    21241 aaacattgcg gccgcgattt ggcagatttg gagcgcgaca ccgaccgtga taatttcatg
    21301 tccgccgaag aggctaaaga atatggtctg attgatcaaa tcttggagaa ccgtgcttct
    21361 ttacagtttt aataagaaat ctgagagaaa caaatgtcgt ctgaaaacag ttcaggacgg
    21421 catttgtctt atagggactg tatagggatg attttgttct ggttgcgttt ggagccgttt
    21481 tcaccatagt tggttttgac atattcctct acaatagcta ggaattcagt tgcaatatta
    21541 tcacctttca gtgttatttt gcgctccccg tccacataaa ccggcgcgac gggtgtttct
    21601 cccgtaccgg gaaggctgat gccgatgtcg gccaatttgc tttctccggg cccattgaca
    21661 acgcagccca ttacggcaac gttcagggat tcaaccccag gataaagggt acgccatata
    21721 gacatttttt ggcgcaggta attttgaaca tcttgtgcca gctcttgaaa tacggtactg
    21781 gtggtacgcc cgcagccggg gcaggcggta accatcggcg taaacgaacg caatcccata
    21841 gtttgtaaaa tctcttgccc gacgacgacc tcctgagtac gcgggctgcc aggttccgga
    21901 gtcagtgaaa tgcggatggt gtcgccgatt ccttcttgaa gcaagacgga taatgccgcc
    21961 gttgatgcga caatgccttt gctgcccata ccggcttcgg tcaaacccaa atgcagcgga
    22021 taggcgcaac ggctgcccag ttcgcggtaa acctgaatca aatcctgaac cgcgctgact
    22081 ttgcacgaca ggatgatttt gtcttcgggc agtcccaata gaacggcttt ttcggcagat
    22141 tccaaagcgg agacaatcag tgcttccttc gtcacttctt cgggcggttt cggcgcggaa
    22201 gaagcgaggt tggcatccat catacgtttg gcgaggcttt gatccaaaga accccagttt
    22261 acgccgatgc ggacggcttt atcgttttca gcagcagtcc gaatcataaa ggcaaatttt
    22321 tcatcgcctt ttacgccttt gccgacattg ccgggattga tgcggtattt ggacaatgct
    22381 ttgccgcatt cgggaaattc cgccaacagg cgttcgccgt tgaagtggaa atcgccgata
    22441 agtggtgtgg catagcccat atcgtccaag cggcggcgga tttcggcaac tttggacgcg
    22501 gcttcggggc tgttgacggt aatacgcacc atttcggatc cggcatcgct caattcctta
    22561 atctgcaatg cggtggcttt tgcatcggca gtgtcggtgt tggtcataga ttggataacg
    22621 acgggtgctt ctgaaccgac ggtaatatga tcgatgcgga cttgatgcgt cttgcggcgt
    22681 tggagtgtgt tcatatggtt tgaatctgtt tattgaccga tgaggacggt ttgcaattct
    22741 tccgagtagg ggaaattcgc ctgcaattgt gcttcatatt cgtatgccgc ctgtgcgttg
    22801 ccgagggctt tggcaatttt ccagcctagc agcaaatcat cggcctgaag gacttctacc
    22861 ctgctttggt attttttaaa gtagtaatcg gcatcgccca actgcccggc cagcattttg
    22921 gtgcgcgcca gttctttaaa tgcgggtggg aactgcggct gggcggcgag ggaacgtttc
    22981 aaataggctt ccgccaatcc gaattgcccc tgttttgcgc tgcatatgcc tttattcagg
    23041 ttggcaatat aaggggtcgg gtaggtgggg tcggccaggg ctttgtcgaa atatgccata
    23101 gattcggcag ggcggttgag cctgccgcac aggaaccagc cgtagttgtt gttgatttcg
    23161 gcactgtcgg gtttgatgga gagggcttgc cggaaacttt cctgcgcctt gtcgttaact
    23221 ttcaggtatt gatagatttc ggcacggacc agccaggcaa gctcgttttt agggtccgat
    23281 ttcagggcgt cttcaatact tgccgtcgcc tgacggtagt cctgaccgcg catatattcc
    23341 attgccaact gggttttgat attggaaacc tgattggctt tttctgcccg cgaggggcgg
    23401 taggaagtgc tgcacgcgcc caaggcaagg acaagtaata aagagattcg tttggatggc
    23461 ttaaaaggca taattacccc tgttgtccga ttaaaatctg ctgccatttt tgttggcggc
    23521 gcgttttatc ctgaacctgc cccgccaact gtccgcaggc ggcatcgatg tcgtcgccgc
    23581 gcgtttttcg tacggtaacg acaaatcctg cctgctgcaa aatatcgcgg aacacacgga
    23641 tgttctcatt gctggagcgt tcgtatccag agtttggaaa gggattgaac ggaatcagat
    23701 tgaacttgca gggaacatct ttgaccagtt cgatcagttc gcgcgcatgt tgcgccttat
    23761 cgtttattcc gtccaacatg acgtattcga aagtgatgaa atccctgggt gctttgacta
    23821 gatagcgttg gcatgcagcc atcaattctt tcaagggata ttttttgttc aacggtacga
    23881 tttggttgcg gacttcgtca ttggaagcgt ggagggaaac cgccaaagcc accggcatga
    23941 catcgcgcaa cctgtccatt tggggaacca tacccgaagt ggaaacggtt acgcggcggc
    24001 ggctcaaacc gtagccgtgg tcgtccagca tgatgcttaa ggcggtaacg acattgtcga
    24061 agttcgccat cggctcgccc atacccatca tcactacatt ggaaattacg cgttcgtttt
    24121 tcggtgtaac acccatcgct ttgtttgccc accacaattg cccgatgatt tcggcagcag
    24181 tcaaattgcg gttgaagccc tgccggccgg tcgaacaaaa tgtacattcc aaagcgcagc
    24241 cgacttgtga ggaaatgcag agcgtgccgc gatccgattc ggggatgaag acggtttcca
    24301 ccccgttgcc cgtaccgaca tccaaaagcc attttcgagt gccgtctgaa gatttttgag
    24361 acatcatcag cttgggaatt tcgatgcctg cctgttcgtt cagtttatgg cgcaacgatt
    24421 ttgccaaatc ggtcatttcg ttaaaatttt gcgcgccgga ttggtgcatc caacgcataa
    24481 cctgtttggc acggaagggt ttttcgccca tatcggcaaa atgtcgggtc agcccttgaa
    24541 ggtcgtagtt gagcagattg gttttcatgt gtttgtgttt ttcttaaatt aaggcttcaa
    24601 ataaaaaatt gcagggcagg caagtttgat ttgaagcctt ttgcgacaga gttttcagac
    24661 ggcatggata tatttatgcc gtctgaagag gagttgtgcg gtgtattgta tcaacggggg
    24721 cagatttcgg tttggctgaa aaagtaggca atttccaaag cggcattttc cacgctgtcg
    24781 gaaccgtgta cggcattaat gctgaccgaa gtggcaaagt ccgcgcgtat cgtgccttcg
    24841 gcggcttcgg aaggattagt tgcacccatc agttcgcggt ttttcaggac ggcgttttca
    24901 ccctctaata cctgaatcat aaccggaccg ccggtcataa attcaaccaa tccggcgtag
    24961 aaggggcggt ctttatgaac cgcataaaat tcttgcgcct ctttgagagt aagctgcttc
    25021 attttggcgg caacgatttt cagaccgttc tcctcaaagc ggctgtatat tttgccgata
    25081 acatttttgc cgacggcatc gggtttgatg atggagatgg tacgttcaat cgccatgcta
    25141 tatccttatt tttacttaag aagaatcaaa tcggtattct atcaaaaaaa taacttatcc
    25201 gcctgaagcc ttgggagata gggtcaggtg cggctgttcc aaataaactt cggactgcat
    25261 ttcgaccatc cggctggcgg tgcgggtaaa ttcttcggca aaatcgcctt ccgtatagat
    25321 atggttgaca tctaccgcgc cggtggcaca cagtttgacc cggaaatcgt agagtacgtc
    25381 aatcagccaa gtcagccgcc gcgcctccgc cttttcttgc ggtgagagtt gttccaaacc
    25441 tgaaataaaa accatttcat aatgttcggc caaatacaga tagtcggact gtgagcgggg
    25501 gccgaagcac agtgcgcgga aatcaaacca tatggcacgg ccggactcgg ctttgtgggg
    25561 aatctcccga ccatggatgg tgctgatgcc ggggttcaaa tcggtaatgc ctgtcatttc
    25621 tttgaacagt tttgccagtt ttgcctcatt ttcttcattg gcaggcgtaa agaaaatctc
    25681 ggcggggcgg agggtacgca gtcggtagtc ttcaccgccg tcaacgttta agacggtcag
    25741 gctggactcg atgagcgcga ttgtgggaag aaaactgctc cggttttgac cttgcgggta
    25801 gagttcggaa ggcgcgtagt ttgaagtcgc caccaaaaca acgccctcgt taagcaggtt
    25861 ttccagcaga cggcctaaaa tcattgcatc cgcaatatcg ctgacatgaa attcgtcaaa
    25921 acataatacg cgggtttctt tggcaatctc ggcggcaacg gatttcaacg ggttgctttc
    25981 gcttttcagg gttttcagcc tctggtggat ttctgccata aaggcatgaa agtggacgcg
    26041 gcgtttgcgg cggtaaggga ggcagccgaa aaaagcgtcc atcagaaagc ttttgccgcg
    26101 tccgaccccg ccatagaaat aaagcccttt ggggacttgc ggggaacgca aactcctgcc
    26161 taaaaaacgg tttcttttgc gtttgaacat catcaattcg gtccaaagcc gatcgaggtg
    26221 ttcgatggcg gctgcctgcg cgtcgtcgcg gatgaagttg ggcagttgtg aggcagcctg
    26281 ataccaggtc agcgggctgt ggttttcaaa cggcggggct ttaaaaagtt ggtctctatt
    26341 actcatattt aaccttgtta tacttcttgc ggcggagaaa gaaaatgctt accgtcggta
    26401 ttataaatga tttccttcaa acttggcatt ttccgtggaa aagaataatg acgcgcacaa
    26461 gggggtataa gcaaaggcgg cgtttcaata tggtgcagat atgagctcaa atgcctttta
    26521 tagt
//
LOCUS       DAWGKF010000007        26491 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.007, whole genome shotgun sequence.
ACCESSION   DAWGKF010000007 DAWGKF010000000
VERSION     DAWGKF010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 26491)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26491)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26491
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.007"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(226..549)
                     /locus_tag="WHR07_000194"
     CDS             complement(226..549)
                     /locus_tag="WHR07_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEZ2129467.1"
                     /translation="MDIVQLGSAELKAWMDEGRMFCLLDVRTDEETAVCSLPNALHIP
                     MNLIPLRQNELPDDVPLVVYCHHGIRSLHTAMYLADAGFENLYNLQGGIDAWAAEIDG
                     NMMRY"
     gene            complement(629..1285)
                     /locus_tag="WHR07_000195"
     CDS             complement(629..1285)
                     /locus_tag="WHR07_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HEZ2129468.1"
                     /translation="MDFEKARFNMVEQQIRPWDVLDFDVLDALAEIPRELFVDEDLQG
                     LAYADMALPLANGHKMLEPKVVARLAQGLKLTKNDTVLEIGTGSGYATALLAKLAGRV
                     VSDDIDAEQQNRAKAVLDGLGLDNIDYVQNNGLTELSAGAPFDAVYVGGAVNLVPEVL
                     KEQLKDGGRMVVIVGRKPVQRALLITRKGDVFEEKVLFDTLVAHLDDKDADPFGGFQF
                     "
     gene            complement(1387..1890)
                     /locus_tag="WHR07_000196"
     CDS             complement(1387..1890)
                     /locus_tag="WHR07_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEZ2129469.1"
                     /translation="MHALHFSASDKAALYREVLPQIESVVADETDWVANLANTAAVLK
                     EAFGWFWVGFYLVDTRSDELVLAPFQGPLACTRIPFGRGVCGQAWAKGGTVVVGDVDA
                     HPDHIACSSLSRSEIVVPLFSDGRCIGVLDADSEHLAQFDETDALYLGELAKILEKRF
                     EASRQAV"
     gene            2074..2847
                     /locus_tag="WHR07_000197"
     CDS             2074..2847
                     /locus_tag="WHR07_000197"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEZ2129470.1"
                     /translation="MYHQIGMWDQKWVIGNWKMNGRLQNNNSLMHRFRILPTAERVLI
                     GLAAPTVYLLQLHNAMQIVLNNRILTCAQDVSRFPDNGAYTGEVSAEMLADTGTDIVL
                     IGHSERSLYFGEKNEIQRRKMENVLNVGLIPLLCVGESLEEREAGKEHEVIAHQLSIL
                     QGLDTKNIAVAYEPVWAIGTGKVATVEQIADMHAFIYKEILSLCGSDVKIRVLYGGSV
                     KADNAADIFAVPYVDGALVGGASLSYDSFTAIISAAQNA"
     gene            2854..3204
                     /gene="secG"
                     /locus_tag="WHR07_000198"
     CDS             2854..3204
                     /gene="secG"
                     /locus_tag="WHR07_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEZ2129471.1"
                     /translation="MEAFKTLIWIVNIISALAVIVLVLLQHGKGADAGATFGSGSGSA
                     QGVFGSAGNANFLSRSTAVAATFFFATCMAMVYIHTHTTKYGLDFSNVQQTQQAPKPI
                     SNTEPSAPVPQQQK"
     gene            3218..3303
                     /locus_tag="WHR07_000199"
     tRNA            3218..3303
                     /locus_tag="WHR07_000199"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3252..3254,aa:Leu,seq:gag)
     gene            4104..4472
                     /locus_tag="WHR07_000200"
     CDS             4104..4472
                     /locus_tag="WHR07_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEZ2129472.1"
                     /translation="MRIFKNQWIVKFAKKHKISDSELLEAVERADNGLIDADLGGGVI
                     KQRIARQGQGRSGGYRSLILFKQADRAFFVYAFAKNDRENISDKELDVYRKAAAYYLK
                     YTRAELAALKEDGIITEIES"
     gene            4469..4780
                     /locus_tag="WHR07_000201"
     CDS             4469..4780
                     /locus_tag="WHR07_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HEZ2129473.1"
                     /translation="MKYKSEALAAIHEMMEGAYNIGAIDKKTMRGFDKSCLTEIKPLS
                     GGDIKAIREKEALSQAAFAIYLNVGKNHVSAWERGVKKPSGAALKLLTIVKNKGIEAI
                     A"
     gene            complement(5550..6104)
                     /locus_tag="WHR07_000202"
     CDS             complement(5550..6104)
                     /locus_tag="WHR07_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129474.1"
                     /translation="MIIGGIGGARTQTGLRFEERTDLRTLFEEIPGYDLRKTYDNAGY
                     EVWFNGELKAYCFKKYEFYRFLKRPGYNINWKDHLSKRLLPDNGLFIIIRDTLFIIEI
                     KFQQTPGSVDEKLQTCDFKRKQYTKLVHSLGWRVEYVYVLNDWFTKPEYKDVLDYIIS
                     VNCHYQFNTIPLRWFGLPDGETNE"
     gene            complement(6101..6910)
                     /locus_tag="WHR07_000203"
     CDS             complement(6101..6910)
                     /locus_tag="WHR07_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEZ2129475.1"
                     /translation="MIDFDKPAEEDAIYQSRLKKIVSDDLVLYNENSLNVMRKILEKY
                     PNGCFDMIFSDPPYFLSNDGFSCQNGQMVSVNKGNWDKSKGMAADLEFYEEWLRLCYA
                     LLKPNGTIWVCGTFHNIYLIGYLMQTIGYHILNNITWEKPNPPPNLSCRFFTHSTETI
                     LWAKKNKKAKHTFHYEMMKAQNDGKQMKCVWTFPPPNKAEKTFGKHPTQKPLPLLERC
                     ILSASNIGDLIFDPFMGSGTTGVAALKHGRKFCGCELEEDFFELAKKRLEK"
     gene            complement(6903..7715)
                     /locus_tag="WHR07_000204"
     CDS             complement(6903..7715)
                     /locus_tag="WHR07_000204"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dam family site-specific
                     DNA-(adenine-N6)-methyltransferase"
                     /protein_id="HEZ2129476.1"
                     /translation="MASKPFLKWAGGKHKLVPFIEHNLPTPTRKRLIEPFCGSAALSL
                     ALDFEHYLLNDINADLIGLFRILKEEKSGFIDYARSFFISENNSDSRFYELREQFNFS
                     KNLHERSALFIYLNRHAFNGLCRYNSKGVFNVPFGRYKSPYFPQQEMEGFIQKSDRVE
                     LMCGDFQMILSQTDNTDTVYCDPPYAPLSPTASFTTYAKESFNLDNQIRLAQSAQQIA
                     PDSQGVLISNHDTEFTRDIYSFAILKTIEVQRNIAAKGSSRKKVGELLAIYD"
     gene            complement(7953..10583)
                     /locus_tag="WHR07_000205"
     CDS             complement(7953..10583)
                     /locus_tag="WHR07_000205"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEZ2129477.1"
                     /translation="MQEHYQPAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYP
                     SGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAMKNNVAPAAWTY
                     DNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWDP
                     VDQTVLANEQVIDGRGWRSGALIEKREIPMYYFKITDYAEELLNDLDKLEHWPEQVKT
                     MQRNWIGKSRGMTVRFAVSDDSKQGLEGDYAKFLQVYTTRPDTLMGATYVAVAAEHPL
                     AAAAAADKPELQAFIAECKAGSVAEADMATMEKKGVPTGRYVVNPLNGDKLEVWIANY
                     VLWGYGDGAVMAVPAHDERDFEFAAKYNLPKKQVIAVGDNAFDANRWQEWYADKENGV
                     LVNSGDLDGLDFQTAFDAVAAKLQSQGAGEPKTQYRLRDWGISRQRYWGCPIPIVHCE
                     QCGDVPVPADQLPVVLPENVVPDGMGSPLAKMPEFYETACPCCGGAAKRETDTMDTFM
                     ESSWYFFRYMSPKFSDGMVDPAAAKYWGAVDQYIGGIEHAILHLLYARFFTKLMRDEG
                     LVNVDEPFERLLTQGMVVCETYYRENDKGGKDWINPADVELTFDDKGRPISAVLKADG
                     LPVVISGTEKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEGAH
                     RFLRRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQF
                     NTAIAAVMELLNQYDKTDTGGEQGRAVAQEVLETAVRLLWPIVPHICETLWSELNGAK
                     LWEAGWPTVDEAALVKSEIEVMVQVNGKLRGKITVAADASKADLEAAALATEGAVKFM
                     EGKPAKKIIVVPGRLVNIVV"
     gene            10850..11365
                     /locus_tag="WHR07_000206"
     CDS             10850..11365
                     /locus_tag="WHR07_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEZ2129478.1"
                     /translation="MKIKQIVKPGLAVLAAGVLSACATKSNVKADGTTDNPVFPKPYS
                     VTLDNNRGTFPTYDELDLMRPGLTKDDIYKILGRPHYDEGMYGVREWDYLFHFHTPGV
                     GIDPENTSGVEGITTCQYKIIFDKDKFARSFYWNPVFPKDAACPPPAPKAEPQVIIRE
                     IVPAKPKRIRQ"
     gene            11372..11815
                     /locus_tag="WHR07_000207"
     CDS             11372..11815
                     /locus_tag="WHR07_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HEZ2129479.1"
                     /translation="MPFRLFLGILCGLSMVAPVYAQGQPDAVNAYIQKKKVIVNTSKA
                     ELCFADDRQCHPVLIGVATPKGTFGLTLNSTDKPGYGGEVIGFKQEGDFLFALHRVWN
                     QIPSERRNERIASPSVSDRIMTNGCINVSDAVYEKLRHYFVLEVI"
     gene            11984..14041
                     /gene="ppk1"
                     /locus_tag="WHR07_000208"
     CDS             11984..14041
                     /gene="ppk1"
                     /locus_tag="WHR07_000208"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HEZ2129480.1"
                     /translation="MPEQNRILCRELSLLAFNRRVLAQAEDKNVPLLERLRFLCIVSS
                     NLDEFFEVRMAWLKRENKLHPRRRLDNGKMPSETIADVTEAARSLIRHQYDLFNNVLQ
                     PELARESIHFYRRRNWTGTQKKWIEDYFDRELLPILTPIGLDPSHPFPRPLNKSLNFA
                     VELDGTDAFGRPSGMAIVQAPRILPRVVPLPSELCGGGHGFVFLSSILHAHVGKLFPG
                     MNVKGCHQFRLTRDSDLTVDEEDLQNLRAAIQNELHDREYGDGVRLEVADTCPAYIRD
                     FLLAQFKLTAAELYQVKGPVNLVRLNAVPDLVNRPDLKFPTHTPGRLKALGKTASIFD
                     LVRQSPILLHHPYQSFDPVVEMMREAAADPDVLAVKMTIYRTGTRSELVRALMKAALA
                     GKQVTVVVELMARFDEANNVNWAKQLEEAGAHVVYGVFGYKVHAKMALVIRREDGVLK
                     RYAHLGTGNYHQGTSRIYTDFGIITADEQITADVNTLFMEITGLGKPGRLNKLYQSPF
                     TLHKMVIDRIARETEHAKAGKPARITAKMNSLIEPTVIEALYRASAAGVQIDLIVRGM
                     CTLRPGVKGLSENIRVRSIIGRQLEHARVYCFHNNGADDTFISSADWMGRNFFRRIET
                     AAPIAAPELKKRVIREGLEMALADNTHAWLMQPDGGYIRAAPAEGESEADLQNDLWTL
                     LGG"
     gene            14066..14335
                     /locus_tag="WHR07_000209"
     CDS             14066..14335
                     /locus_tag="WHR07_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129481.1"
                     /translation="MPSETFPFQTAWFYSNLNRADWNQKHTFAIPAQALPLYAPNPNP
                     PHSRRHCLSDSRTKPRIRLHGSGHISNTGIVLRKTVKSASASQYI"
     gene            complement(14304..15407)
                     /locus_tag="WHR07_000210"
     CDS             complement(14304..15407)
                     /locus_tag="WHR07_000210"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEZ2129482.1"
                     /translation="MLILQAERDSLLKPLQAVTGIVERRHTLPILSNVLIEGKGGQTK
                     LLATDLEIQIDTAGPEGGADDFRITTNAKKFQDILRALPAGALVSLDWDDSRLTLKAG
                     KSRFALQTLPAADFPMMNVGEDISATFSLEQERFKTMLSQVQYSMAVQDIRYYLNGLL
                     MQVEGSQLRLVATDGHRLAYAACAIDADLPRAEVILPRKTVLELFKLLNNPDDPIQIE
                     LLDKQVRFQCNGTTIVSKVIDGKFPDFNRVIPLDNDKIFVLSRAELLGALERVSILAN
                     EKFRGARLFLQSGLLSVVCSNNEQEEAREEIEIAYQGGELEVGFNIGYLMDVLRNIHS
                     DDMQLAFGDANRSTLFTVPNNPNFKYIVMPMRI"
     gene            complement(15487..17043)
                     /gene="dnaA"
                     /locus_tag="WHR07_000211"
     CDS             complement(15487..17043)
                     /gene="dnaA"
                     /locus_tag="WHR07_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEZ2129483.1"
                     /translation="MTLAEFWPLCLRRLHDMLPQGQFAQWIAPLTVGEEGGVWVVYGK
                     NQFACNMLKSQFAGKIEAVREELAAGRSAFVFKPGEGVRYEMAAVEGAVEPAEPSLHA
                     GSEEMPVQEVLLDELPSEEPVKPAASKTAADILAERMKNLPHEPRHTAEPASRPESEV
                     LAKARTDAQRDAEEARYEQTNLSPDYTFDTLVEGKGNRLAAAAAQAIAESPGQSYNPF
                     FLYGSTGLGKTHLVQAVGNELLKNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQY
                     KQYDLLIIDDIQFIKGKDRTMEEFFYLYNHFHNEKKQLILTCDVLPAKIEGMDDRLKS
                     RFSWGLTLELEPPELEMRIAILQKKAEAAGISIEDEAALFIANLIRSNVRELEGAFNR
                     VGASSRFMNRPVIDIDLARTALQDIIAEKHKVITADIIIDAVAKYYRIKISDVLGKKR
                     TRNIARPRQVAMSLTKELTTLSLPSIGDSFGGRDHTTVMHGIRAVAKLREEDPELAQD
                     YEKLLILIQN"
     gene            17336..17470
                     /gene="rpmH"
                     /locus_tag="WHR07_000212"
     CDS             17336..17470
                     /gene="rpmH"
                     /locus_tag="WHR07_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011289924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEZ2129484.1"
                     /translation="MKRTYQPSVTKRKRTHGFLVRSKTRGGRAVLAARRAKGRKRLAV
                     "
     gene            17473..17838
                     /locus_tag="WHR07_000213"
     CDS             17473..17838
                     /locus_tag="WHR07_000213"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEZ2129485.1"
                     /translation="MDYRFGRQYRLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDH
                     PRIGLVVGKKTAKRANERNYMKRVIRDWFRLNKNRLPPQDFVVRVHRKFDRSTAKQAR
                     AELAQLMFGNPATGCRKQA"
     gene            17903..18124
                     /gene="yidD"
                     /locus_tag="WHR07_000214"
     CDS             17903..18124
                     /gene="yidD"
                     /locus_tag="WHR07_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEZ2129486.1"
                     /translation="MNFLLSKLLLGLIRFYQYCISPLIPPRCRYTPTCSQYAVEAVKK
                     YGAFKGGRLAIKRIARCHPLGGHGHDPVP"
     gene            18296..19933
                     /gene="yidC"
                     /locus_tag="WHR07_000215"
     CDS             18296..19933
                     /gene="yidC"
                     /locus_tag="WHR07_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEZ2129487.1"
                     /translation="MDFKRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTA
                     SAEAALAPATPITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFILFGDGKEYT
                     YVAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKG
                     SYLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKV
                     SFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGRQSVCAAGECNIDI
                     KRRNDKLYSTSVSVPLAAIQNGAKAEASINLYAGPQTTSVIANIADNLQLAKDYGKVH
                     WFASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQA
                     IKEKYGDDRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAP
                     WLGWITDLSRADPYYILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFF
                     PAGLVLYWVVNNLLTIAQQWHINRSIEKQRAQGEVVS"
     gene            complement(20014..20724)
                     /locus_tag="WHR07_000216"
     CDS             complement(20014..20724)
                     /locus_tag="WHR07_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEZ2129488.1"
                     /translation="MSPVLYLIPTPLGTPDTPCLLPHEQQAIVGLTDFVVEAEKTARA
                     HLKHLGVTTPIRELNLQTLNEHTDLKTLPELLKPLQEGRSMGIVSEAGCPAVADPGAN
                     LVALAHKHGFEVRPLVGPSSLLLALMASGANGQSFAFKGYLPSEKNERIQAFRALEQR
                     SRQCGETQIFIETPYRNDALLADAVENLHPETRLCTATDLTLPTQEIISQTIVQWRKR
                     KEMPNLKKRPTIFVMYAG"
     gene            complement(20786..21376)
                     /gene="maf"
                     /locus_tag="WHR07_000217"
     CDS             complement(20786..21376)
                     /gene="maf"
                     /locus_tag="WHR07_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation protein Maf"
                     /protein_id="HEZ2129489.1"
                     /translation="MGLELPLILGTSSVFRREQMERLGIAFQAASPDFDETPMLGESA
                     PQTALRLAEGKARSLTGRFPEALIVGADQVAWCDGRQWGKPMNLANAQKMLMHLSGRE
                     IEFYSAIVLLNTVTGRMRRHIDKTVVVMRQLDELHILRYLEREPDAVYCSCALKSEDL
                     GALLIERIESTDPNALIGLPVFRLVDFLKNEGVEVL"
     gene            21524..22027
                     /locus_tag="WHR07_000218"
     CDS             21524..22027
                     /locus_tag="WHR07_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HEZ2129490.1"
                     /translation="MSDPNLIDLEIFAAEGQNLQGSFLLEELDERVSSHDYPADRQTK
                     ISFTLTGGRDRLQRLFLDLNVKADMPLICQRCIKPMPFMLDESSRIVLFSNEESLDES
                     MLADEELEGILIEKELDVRTLVEDQILMSLPFSPRHEDCGDNGTLEEVNRDKPNPFAV
                     LAGLKSN"
     gene            22061..22240
                     /gene="rpmF"
                     /locus_tag="WHR07_000219"
     CDS             22061..22240
                     /gene="rpmF"
                     /locus_tag="WHR07_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009889986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEZ2129491.1"
                     /translation="MAVQQNKKSPSKRGMHRSHDALTAPALSVDSTTGEVHRPHHISP
                     NGMYRGRKVVKAKGE"
     gene            22415..22942
                     /locus_tag="WHR07_000220"
     CDS             22415..22942
                     /locus_tag="WHR07_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HEZ2129492.1"
                     /translation="MKQKIWYTYDDIHRVIKALAEKIRNADIKYDAMIAIGGGGFIPA
                     RMLRCFLEIPIYAVTTAYYDSDNEGQVTEEVKKVQWLDPVPEALRGKNVLVVDEVDDS
                     RVTMEFCLTELLKEDFGTIGVAVLHEKIKAKAGKIPEGIPYFSGITVEDWWINYPWDA
                     LDIDEHNRLAEAGRG"
     gene            23030..24085
                     /gene="plsX"
                     /locus_tag="WHR07_000221"
     CDS             23030..24085
                     /gene="plsX"
                     /locus_tag="WHR07_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEZ2129493.1"
                     /translation="MITLAVDAMGGDQGLAVTVPGATAFLQAHPDVRLIMTGDETQLR
                     QALTAAGAPMERIDICHTTQVVGMDESPQSALKNKKDSSMRVAINQVKEGKAQAAVSA
                     GNTGALMATARFVLKTIPGIERPAIAKFLPSDTDHVTLALDLGANVDCTPEQLAQFAV
                     IGSELVHALHPQKGQPRVGLVNVGTEDIKGTDTVKQTYKLLQNSKLNFIGNIESNGIL
                     YGEADVVVADGFVGNVMLKTIEGAVKFMSGAIRREFQSNLFNKLAAVAALPALKGLKN
                     KLDPRKFNGAILLGLRGIVIKSHGGTDETGFRYALEEAYHEAKSAGLSKIEQGVAEQL
                     AALETAKAVQNENADGL"
     gene            24221..24472
                     /locus_tag="WHR07_000222"
     CDS             24221..24472
                     /locus_tag="WHR07_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafI family immunity protein"
                     /protein_id="HEZ2129494.1"
                     /translation="MKTLEKRMKALDKQMMKFGKSLEGRLDARLIESALDYIHYSERF
                     LAFEILCTYIEDFDVRLTEQESREISFINKEFEIESTSD"
     gene            24499..24915
                     /locus_tag="WHR07_000223"
     CDS             24499..24915
                     /locus_tag="WHR07_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129495.1"
                     /translation="MKTSTVVFGGFFMADNGERIQIPVLENPDIREINHFFSVSNFEK
                     KTGVLVFRIIPEPEFGNTELTVYFEKGYYLPMIQTILEGGDIEVKNLKTENYSGNTME
                     IWGDSYPIEHISKNISTIQNIISEFMIQKQTPAPII"
     gene            24935..25138
                     /locus_tag="WHR07_000224"
     CDS             24935..25138
                     /locus_tag="WHR07_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129496.1"
                     /translation="MPSEACLVFRRHFLRLKQRIGNPALPVHGNLHLKTICIPNHTPI
                     PVSVICTLPVLGNHRFFAYNSRI"
     gene            25165..26127
                     /locus_tag="WHR07_000225"
     CDS             25165..26127
                     /locus_tag="WHR07_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HEZ2129497.1"
                     /translation="MQYAKISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRH
                     IAAENEKTSDLAAEAARRALDAAGLDSGEIDLIIVATATPDMQFPSTATIVQQKLGIT
                     NGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFG
                     DGAGAVVLSAADKPGIIHSKLKADGNYLKLLNVPGQIACGKVSGSPYISMDGPGVFKF
                     AVKMLSKIADDVIEEAGYTAAQIDWIVPHQANRRIIESTAKHLGLSMDKVVLTVQDHG
                     NTSAASIPLALDTGIRSGQIKRGQNLLLEGIGGGFAWGAVLLQY"
     gene            26174..>26491
                     /locus_tag="WHR07_000226"
     CDS             26174..>26491
                     /locus_tag="WHR07_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HEZ2129498.1"
                     /translation="MKRQAFFKPIACAAFLSAVSLRLPVLGACYAILSLYAFALYSID
                     KRRAVRGKRRIPEHRLLLPALFGGWAGAYLGSRIFRHKTAKKRFVVLFRLTVSGNVLA
                     TLIL"
BASE COUNT         6716 a         7541 c         6363 g         5871 t
ORIGIN      
        1 gcctgcacat tgaaaatgcc gcccaagcaa accttcagtt tgccagcctc gtcctagccc
       61 tctcccacgg ggagagggga ttggggtgca ggctgccttt aaggttcagg caaattttaa
      121 cttcgttgat accgcgcttt agcttcgcag aagctgcact ttcagacgac cttttggaac
      181 accacaggta cacgcattta aggaatgccg tctgaaatgc ctgcctcaat aacgcatcat
      241 gttgccgtca atctcggccg cccatgcatc gatgccgccc tgaaggttgt acaggttttc
      301 aaaacccgcg tccgccaaat acatcgccgt atgcaggctg cggataccgt ggtggcaata
      361 caccacaagc ggcacatcat ccggcagctc gttctgccgc agcggaatca gattcatcgg
      421 gatatgcagc gcatttggca gcgaacaaac cgccgtttct tcatccgtac gcacgtccaa
      481 caaacaaaac atccgccctt cgtccatcca cgccttcaat tccgccgacc caagttgcac
      541 aatatccatc gcacccccca aaaaaaaacc aagcaaaatg ccgtctgaag ccccaaaccc
      601 gctttcagac ggcatcgcaa tccgaacatc aaaactgaaa accgccaaac ggatcggcat
      661 ccttatcatc caaatgcgcc accaaggtat cgaacagcac cttctcttca aacacatcgc
      721 ccttgcgcgt aatcaaaagc gcgcgctgaa caggcttgcg gcctacgata accaccatgc
      781 gtccgccatc tttcaactgt tctttcaaca cttcaggcac aaggtttacc gcaccgccga
      841 cataaaccgc atcaaacggc gcacctgcgg aaagttcggt caacccgttg ttttgcacat
      901 aatcgatatt gtccaaaccc aagccgtcca acaccgcttt ggcgcggttt tgctgttcgg
      961 catcgatgtc gtccgacacc acacgaccag ccaattttgc caacagcgcg gtcgcatagc
     1021 ccgaacccgt gccgatttcc aaaaccgtat cgtttttcgt cagcttcaag ccctgcgcca
     1081 gccgcgccac gactttcggc tcgagcatct tatgaccgtt ggcaagcggc agcgccatat
     1141 ccgcatacgc caaaccctgc aagtcctcat cgacaaaaag ctcgcgcgga atctccgcca
     1201 aagcgtccaa aacgtcaaaa tccaatacat cccaaggacg gatttgctgt tcgaccatat
     1261 tgaaccgcgc tttttcaaaa tccatttagt gctccgtcaa ataattgttc caacaatagc
     1321 aggcattata aaaccacact cccgccgcgc caacttcggc acgcgccgcc cgcccctttc
     1381 cctcactcaa accgcctgac gcgaagcctc aaaccgcttc tccaaaatct tcgccagctc
     1441 gcccaaatac aaagcatctg tctcatcaaa ctgcgccaaa tgttcgctgt ccgcgtccaa
     1501 cacgccgata cagcggccgt ctgaaaacag cggcacgaca atctccgaac gcgacaaaga
     1561 cgaacaggca atatggtcgg gatgcgcgtc cacatccccg acgaccaccg tcccgccctt
     1621 cgcccaagcc tgaccgcaca ccccgcgacc gaacggaatc cgcgtacacg ccaaaggccc
     1681 ctgaaacggt gccaaaacca attcgtccga acgcgtatcg accaaataaa aacccaccca
     1741 aaaccaaccg aacgcctcct tcaaaaccgc cgccgtgttc gccaaattcg ccacccaatc
     1801 cgtctcgtcc gccaccacag actcaatctg cggcaacacc tcccgataaa gcgcggcctt
     1861 gtccgaagcc gaaaaatgaa gcgcgtgcat cacatctcct atagttgcat acatatcagg
     1921 cggccattat aaaacaacct gcccgaaaca acattccaaa ccgcccccgc agccgcccgc
     1981 cccaagttgc gaacccgccg catatccact aaacttcaca ttgcaacgcg ccacacgcgg
     2041 cagacagaaa aaacacgaca cggagcaaaa aagatgtatc accaaatcgg aatgtgggat
     2101 caaaaatggg tcatcggcaa ctggaaaatg aacggccggc tccagaacaa caattcgctc
     2161 atgcaccgct tccgcatcct ccccaccgcc gaacgcgtcc tcatcggact cgccgccccg
     2221 accgtttacc tgctgcaact gcacaacgcc atgcaaatcg tcttaaacaa ccgcatcctc
     2281 acctgcgccc aagacgtgag ccgcttcccc gacaacggcg cgtacaccgg cgaagtgtcc
     2341 gccgaaatgc tcgccgacac cggcacagac atcgtcctca tcggacactc cgaacgcagc
     2401 ctttatttcg gcgaaaaaaa cgaaatccaa cgccgcaaaa tggaaaacgt cctcaacgtc
     2461 ggactcatcc cgttattgtg cgtcggcgaa agcctcgaag agcgcgaagc cggcaaagaa
     2521 cacgaagtca tcgcccatca gctttccatc ctgcaagggc tggataccaa aaacatcgcc
     2581 gtcgcctacg aacccgtctg ggcgatcggc accggcaaag tcgccaccgt cgaacagatt
     2641 gccgatatgc acgcattcat ctacaaagaa atcttgtctt tgtgcggaag cgatgttaaa
     2701 atccgcgtcc tttacggcgg aagtgtgaaa gcggacaacg cggccgacat cttcgcagta
     2761 ccttatgtgg acggcgcact cgtcggcggc gcgtcattgt cgtacgactc ctttaccgcc
     2821 atcatcagtg ccgcacaaaa tgcgtagaaa aatatggaag ccttcaaaac cctaatttgg
     2881 attgttaata taatttccgc tttggccgtc atcgtgttag tattgctcca acacggcaaa
     2941 ggcgcggatg ccggcgcgac cttcggatcg ggaagcggca gcgcgcaagg cgtattcggc
     3001 tctgccggca acgctaactt cctcagccgt tcgaccgccg ttgcagcaac atttttcttt
     3061 gcaacctgca tggctatggt gtatattcac acccacacga caaaatacgg tttggacttc
     3121 agcaacgtac aacaaactca gcaagcaccc aaacccataa gcaataccga accttctgcc
     3181 cctgttcctc agcagcagaa ataacagttt ttcaaatgcc gacatggtga aattggtaga
     3241 cacgctatct tgagggggta gtggccgtag gctgtgcgag ttcaaatctc gctgtcggca
     3301 ccaacacaca aaacgcttag aaattctaag cgtttttttc gtttaatcct gtctaatgcc
     3361 gtcaaccaat cccaatcaat acaaggattt caggctgatt gttatcctgc cgtccccctt
     3421 cctgacagtg caatcccgtc caatccgccc taattgaact aacctgattt tttacagcat
     3481 ccgaaaatac cgcgagaaaa taccgtaaaa ataaagctga acgaccacca aatcaggaat
     3541 gccaagcggg aaatagcttg cggggaatac tgacgcaccg tagggaatga gggggaaacc
     3601 gtccaagatg cagagcggtt tttttttggg tttttggaaa aaacctatac tatagtggat
     3661 taaatttaaa ccggtacggc gttgcctcgc cttgccgtac cggtttaaat ttaattcact
     3721 ataaaataag aaaaagataa aaaattggta acaaatgcgg taacaaatgg taacgaatcg
     3781 gtaacaactt ttggggtttt ccggtttttc accgtcttgg cagtgggagc gtagcggaat
     3841 gaaaagccaa aacgcacgga accgcgccta ttttgagcag gaatggcggt taaaccgctt
     3901 ggttatatac ggggaatagg aagacagcga aacgcgctaa aaacgcaatt tgagccatta
     3961 aaagcgattg attaaaaaat aatcaggtta gccgccagtg tttcaggcgg cataaacgga
     4021 gaaattgcag ggtataaaaa ggcggcttgc cgtgttgtct gtctctggta taattccaag
     4081 tatcactaat caacggctac acaatgcgga tattcaaaaa ccaatggata gtgaaatttg
     4141 ccaagaaaca taaaatcagt gattccgagc tgctggaagc ggtagagcgg gcggataacg
     4201 ggctgataga cgcagattta ggcggcggtg tgattaagca gcgcatagca aggcaaggac
     4261 aaggcagaag cggcggctat cgcagcctga tattgttcaa acaggcagat agggcatttt
     4321 tcgtttacgc ctttgccaag aacgacaggg aaaacatttc ggataaagaa ctggacgttt
     4381 accgaaaagc cgccgcatat tatctgaaat acacgcgggc agagctggcg gctttgaaag
     4441 aagacggcat tatcacggag atagaatcat gaaatacaaa agcgaggcat tagccgccat
     4501 tcatgaaatg atggaagggg cttacaacat cggcgcaatc gacaaaaaga ctatgcgcgg
     4561 ctttgacaag tcctgcctga ccgaaatcaa accgttgagc ggcggagaca tcaaggcaat
     4621 cagggagaag gaggcactat cgcaagccgc tttcgccatc tatctcaacg tgggaaaaaa
     4681 tcacgtttcg gcttgggagc ggggcgttaa aaagccgagc ggcgcggcgt tgaagctgct
     4741 gaccatcgtc aaaaacaagg gtatcgaagc cattgcgtag ccgacttggc aaacggcaaa
     4801 atcagcaagt tcacaataga cacgctgctg aatatgcctg ccaaaacagg caagaccgcc
     4861 gaactgaata tcagggcgta gccgcataaa tgcccgaccg catcaaacca agccgaaacg
     4921 gcgacggtgc agacgacata gcccgacagc aaggcacggc gcagacgggc gcgaaacccg
     4981 aaacatcccc gaccgcgagg cacggggatt ttttgagccc gttgcagggg gattggattt
     5041 aagcggcgcg ggcttgaaag caaaacgggc ggggcgcaga actgtttaaa tgccgtctga
     5101 atctcaaacg atttcagacg gcattttgaa acaacggctc aaattctcga tccccttccc
     5161 ttaacgccga cgttttttat taacgcgccc cttatttctg acactttgct cataaaccgg
     5221 cataacggtc ggcaacaacc gttttagatt ttctatacgg gcattgttta cagcatcagc
     5281 ataagacacc gtactctgga ataccgccta aaccctgcgg atagttttgg atgtggtatc
     5341 gacattgtcg gcagacttgt ctaactcgac cgttttcaaa taatctttga cagatgctgc
     5401 attcagtgtc gcggaatccg cgtattttga acaaaaggtc gggctacttt atcacaatag
     5461 cagaaagatg gaaaacggcg gggattggtg aaaggtcgtc tgaaatgata ttcagacgac
     5521 cttgaacggc tgtgttttaa atatggtatt tattcatttg tttcaccatc aggcagtcca
     5581 aaccacctta agggaatcgt gttaaattgg taatggcagt taacactgat aatataatct
     5641 aaaacatctt tatattccgg ctttgtaaac caatcattca aaacatagac atattcaacc
     5701 cgccaaccta aagagtgaac caattttgta tattgttttc tcttaaaatc gcaagtttgt
     5761 aatttctcat ctactgaacc gggagtttgt tggaatttga tctcaataat aaataaggta
     5821 tcacggatga tgataaataa gccattgtcg ggtagtaatc ttttagacag atggtctttc
     5881 caattaatat tgtatcccgg tcttttcaaa aatcggtaaa actcatattt tttaaaacaa
     5941 taagccttca attctccatt gaaccaaact tcataacccg cattatcata tgtttttctt
     6001 aagtcgtacc cgggaatttc ttcaaacaac gttcgtaagt ctgtacgttc ttcgaatctg
     6061 agtcctgttt gtgtccttgc accaccgatt ccgccaataa tcatttttct aacctttttt
     6121 ttgctaattc aaaaaaatct tcttccagtt cgcaaccaca aaatttccga ccatgtttta
     6181 aggcggcaac gcctgttgtg ccgctgccca tgaaagggtc aaaaattaaa tctccgatgt
     6241 ttgaagctga gagtatgcag cgttcaagca aggggagtgg tttttgtgtc ggatgtttgc
     6301 cgaatgtttt ttcggctttg tttggaggag gaaatgtcca aacacatttc atctgtttgc
     6361 catcattttg tgctttcatc atttcataat gaaacgtgtg tttggctttt ttatttttct
     6421 ttgcccataa gattgtttct gtcgaatggg taaaaaaacg gcaggacaaa ttagggggag
     6481 gattgggttt ttcccaagta atattgttca aaatatggta tccgatagtt tgcatcaggt
     6541 agccgattaa ataaatatta tggaatgtgc cgcaaaccca aattgtgccg tttggtttta
     6601 ataaggcgta acacagtcgg agccattctt cgtagaattc caaatctgcc gccattcctt
     6661 tggatttatc ccagttgccc ttattgacgg aaaccatttg tccgttttga caactgaagc
     6721 cgtcattgga aagaaagtaa ggcgggtctg agaaaatcat atcaaaacag ccgtttggat
     6781 atttttccaa tatcttccgc atgacgttaa gggaattttc gttgtagagg acaaggtcgt
     6841 ctgaaacgat ttttttcaaa cgactttgat aaatggcgtc ttcttcagcc ggtttgtcaa
     6901 aatcaatcat aaattgccaa taattctccg acttttttac ggctgctgcc ttttgcggca
     6961 atattgcgtt gtacttcaat tgttttcaga atggcaaaag aataaatatc ccttgtgaat
     7021 tcagtatcat gatttgaaat caaaacgcct tgggaatcgg gcgcaatttg ttgggctgac
     7081 tgggcaagac ggatttgatt gtctaaattg aaactttctt tggcataagt ggtaaatgaa
     7141 gcggttgggc ttaaaggcgc gtaaggggga tcgcaataaa ccgtatcggt attgtctgtc
     7201 tgagatagaa tcatttgaaa atctccgcac attaattcaa ctctgtcaga tttctgaatg
     7261 aaaccttcca tttcttgttg gggaaagtac ggcgatttgt agcgtccgaa cggcacattg
     7321 aatacccctt tgctgttgta acggcataaa ccgttaaaag catgacggtt caaataaata
     7381 aatagtgctg agcgttcgtg cagatttttg ctgaagttga attgttcccg caattcatag
     7441 aatcttgaat cgctattgtt ttcggaaata aagaaagagc gggcgtagtc gatgaatccg
     7501 gatttttctt cttttaggat acggaataag ccgattaagt cagcgttaat atcattgagc
     7561 agataatgtt cgaagtccaa tgcaagagac aaagcggcag aaccgcaaaa gggttcaatc
     7621 aggcgttttc gtgtaggagt gggtagatta tgttcgataa aggggacaag tttatgtttg
     7681 ccgcctgccc attttaggaa gggttttgaa gccattagga tgcagagtat aagcgtggtt
     7741 gattggcttg gaattgtgcc aaaacatcgt gaggaataca acggatttat attttgggga
     7801 cgtgtgtaga gtgagtctaa atccaataga acctttccat tccaatatgt tattggactt
     7861 atcaactcca tctgccttaa aaaggccgtc tgaaaccctg tttcccagtt ttcagacggc
     7921 ctttatccgt atggctaaac cttaagagcg gtttagacga cgatattcac caagcgtccg
     7981 ggaacgacga tgattttctt cgccggtttg ccttccatga atttcaccgc gccttcggtg
     8041 gcgagtgcgg cggcttcgag gtcggctttg gatgcgtcgg cggcaacagt gattttgccg
     8101 cgcagtttgc cgttgacttg aaccatcact tcgatttcgg atttgaccaa ggcggcttcg
     8161 tcgactgtcg gccagcctgc ttcccacagt ttcgcgccgt tcaattcgct ccacagggtt
     8221 tcgcagatgt gcggcacgat gggccacaac aggcgtacgg cggtttccaa tacttcttgg
     8281 gcgacggcgc gtccttgttc gccgccggtg tcggttttgt cgtattggtt gagcaattcc
     8341 atcacggcgg cgatggcggt gttgaactgc tggcggcggc cgtagtcgtc gctgactttg
     8401 gcagtggtcg cgtgcagttt gtggcgcagg tctttgagtt ctttagacaa accgtcttgg
     8461 ctgcctgcga acgctttgac cgcttcgcct tgcttcaagt attcgtaaac ggtacgccac
     8521 aggcggcgca ggaagcggtg tgcgccttcg acgccgctgt cgctccattc gagggactgt
     8581 tcgggcggtg cggcgaacat cataaacagg cgggcggtgt ccgcgccgta ggcgttaatc
     8641 agttcttgcg gatcgacgcc gttgtttttg gacttggaca ttttttccgt gccgctgatg
     8701 acgacgggca gcccgtcggc tttgaggacg gcggaaatgg ggcggccttt gtcgtcgaac
     8761 gtcagctcga catcggcggg gttgatccaa tctttgccgc ctttgtcgtt ttcgcggtag
     8821 taggtttcgc aaacgaccat gccttgcgtc agcaggcgtt caaacggttc gtcaacattg
     8881 actagacctt cgtcgcgcat cagtttggtg aagaaacgcg cgtacaagag gtgcaaaatc
     8941 gcgtgttcga tgccgccgat gtattggtcg accgcgcccc agtatttcgc ggcggcagga
     9001 tcgaccatgc cgtctgaaaa ttttggcgac atatagcgga agaaatacca gctcgattcc
     9061 atgaaggtgt ccatggtgtc ggtttcgcgt tttgccgcgc cgccgcagca tgggcaggca
     9121 gtttcgtaaa actcgggcat ttttgccagc ggcgaaccca tgccgtcggg tacgacgttt
     9181 tcaggcaaaa cgaccggcaa ttggtcggca gggacgggta cgtcgccgca ttgttcgcaa
     9241 tggacgatgg gaatcgggca gccccagtag cgttggcgcg aaatgcccca gtcgcgcagg
     9301 cggtattggg ttttcggttc gcccgcgcct tggctttgca gcttggcggc aacggcatcg
     9361 aatgccgtct gaaaatccaa gccgtccaag tcgccgctgt tgaccaatac gccgttttct
     9421 ttgtcggcat accattcttg ccatcggttt gcgtcgaatg cgttgtcgcc gacggcaatg
     9481 acttgttttt taggcagatt gtatttggcg gcgaactcaa aatcgcgttc gtcgtgcgcc
     9541 ggaaccgcca tcactgcgcc gtcgccgtag ccccacaata catagttggc aatccacact
     9601 tccagcttgt cgccgttgag cgggttgacg acgtagcgac cggtcggcac gccttttttc
     9661 tccatcgtcg ccatatcggc ttcggcaacc gaaccggctt tgcattcggc aataaatgcc
     9721 tgcaattcgg gtttgtcggc ggctgcggcg gctgccagcg gatgctcggc ggcaacggca
     9781 acataagtcg cacccatcag cgtgtcgggg cgggtggtat aaacttgcag gaatttcgcg
     9841 taatcgcctt ccaagccttg tttgctgtcg tctgaaacgg cgaagcgcac ggtcataccg
     9901 cgcgatttgc cgatccagtt gcgctgcatg gttttgactt gttccggcca gtgttccagc
     9961 ttgtccaagt cgttgagcag ctcttcggcg taatccgtga ttttgaagta atacatcggg
    10021 atttcgcgtt tttcgatcaa cgcgcccgaa cgccagccgc gtccgtcgat gacttgctcg
    10081 ttggcaagga cggtttggtc gaccgggtcc cagttcaccg tgccgttttt gcgatagacg
    10141 atgccttttt caaacagctt ggtaaacagc cattgttccc agcggtagta ttcgggtttg
    10201 caggttgcgg tttcgcgcgc ccagtcaatc gcaaaaccca ggcttttgag ctgggttttc
    10261 atgtattcga tgttatcgta cgtccaagcg gcaggggcga cgttgttttt catcgccgcg
    10321 ttttccgccg gcatgccgaa cgcgtcccaa cccataggct gcatgacgtt gaagccgttt
    10381 aaaagtttga agcggctcaa tacatcgccg atggtgtagt tgcgcacatg ccccatgtgc
    10441 agcttgccgc tgggataggg gaacatggag aggcaataat atttgggttt ggaagcgtct
    10501 tcggagacgt tgaaaatacg ggcgtcgtcc cattttttct gcgccgcagg ctcgatggcg
    10561 gcgggttggt aatgttcttg catggtcatt ctgtttttcg cttgaaaacg ttaggaattt
    10621 aaaggaggaa ttataacagg ttgccgatgt cggcgaatcg gcaaattgcc ggcaggatgc
    10681 gtaaattcgc acgcgcatca ttccgtatgc cgtacaaata caccgcgttt actgatacgc
    10741 acgtttttta tgctaatatt acaaaccaaa atcaaatgtt taaaactctc ctgatgcggc
    10801 tcttccgaac aaaaggcaga cgggcatcgg gtaaaagagg attctgcata tgaaaatcaa
    10861 acaaatcgtc aaaccgggct tggcagtatt ggcggcgggc gttctgtctg cctgcgcaac
    10921 caaaagcaac gtcaaagccg acggaacgac cgacaatccg gttttcccga aaccctattc
    10981 cgtaacgctc gacaacaatc gcggtacatt cccgacctat gacgaattgg acttgatgcg
    11041 tcccggtctg accaaagacg acatctacaa aatcctgggt cgtccgcatt acgacgaagg
    11101 tatgtacggc gtgcgcgaat gggattatct gttccacttc cacaccccgg gcgtaggcat
    11161 cgaccctgaa aacacttccg gcgtagaagg cattaccacc tgtcaataca aaattatttt
    11221 cgataaagac aaatttgccc gcagcttcta ctggaacccc gtcttcccga aagatgccgc
    11281 ctgtccgccg cccgcaccca aagccgagcc gcaagtcatc atccgcgaaa tcgtgccggc
    11341 aaaaccgaaa cgtatccgcc aataatccga catgccgttc cgcctgtttt tagggatatt
    11401 atgcggcctg tcaatggttg cccccgtata tgcacagggg caaccggatg cggtcaacgc
    11461 ttatattcaa aagaaaaaag tcatcgtaaa cacatccaaa gcggaactct gttttgccga
    11521 tgacaggcag tgccaccccg tcctcatcgg tgttgccacg cccaagggga cgttcgggct
    11581 gacgctgaac agtaccgaca agcctggata cggcggcgaa gtcatcggtt tcaagcagga
    11641 gggtgatttt cttttcgccc tgcaccgcgt ttggaatcag ataccgtcgg aaaggcggaa
    11701 cgaacgcatc gcctccccgt ccgtgtccga caggattatg accaacggct gcatcaacgt
    11761 cagcgatgcg gtgtacgaaa aactgcgtca ttattttgtg ttggaagtga tttgaaacag
    11821 acggataccg cacgcgccgg tatctgtttt cacattgccc cgatgcctga aacagactgt
    11881 ccgccacgtc atgccgtctg aaaccggcgc agatgccgcc aagccttcag acggcattgc
    11941 ctgcccgctc cgaccgaaca acaaccatct ttgggagaac cttatgcccg aacaaaaccg
    12001 catcctctgc cgcgaactaa gcctgctggc attcaaccgc cgcgtgttgg cacaggcgga
    12061 agacaaaaac gtcccccttt tggaacgcct gcgcttcctg tgcatcgtgt cgtccaatct
    12121 tgacgagttt ttcgaagtcc gcatggcgtg gctcaagcgt gaaaacaagc tgcacccccg
    12181 gcgcaggctg gacaacggca aaatgccgtc tgaaaccatc gccgacgtta ccgaagcggc
    12241 gcgctccctg atacggcatc agtacgacct gttcaacaac gtccttcagc ccgagttggc
    12301 gcgggaaagc atccattttt accgccgccg caactggacg ggcacgcaga aaaaatggat
    12361 cgaagactat ttcgaccgcg aactgctgcc gatcctgacc cccatcggac tcgacccgtc
    12421 ccaccccttc ccgcgaccgc tgaacaaatc gctcaacttc gccgtcgaac tcgacggcac
    12481 ggacgcattc ggcaggcctt cggggatggc gattgtgcag gcaccgcgca tcctgccgcg
    12541 cgtcgttccc ctgccgtccg aactgtgtgg cggcggacac ggcttcgtct tcctgtcgtc
    12601 catcctccac gcccacgtcg gcaaactctt cccgggcatg aacgtcaaag gctgccacca
    12661 gttccgcctg acgcgcgaca gcgacttgac cgttgacgaa gaagacctgc aaaacctccg
    12721 cgccgccatc caaaacgaac tgcacgaccg cgaatacggc gacggcgtgc ggctcgaagt
    12781 cgccgacacc tgtcccgcct acatccgcga ctttctgctc gcgcaattca aactgaccgc
    12841 cgccgaactc tatcaggtca aaggcccggt caacctcgtg cgcctcaacg ccgtccccga
    12901 cctagtcaac cgccccgatt tgaaatttcc cacacacacg ccgggcagac tgaaagcctt
    12961 gggcaaaacc gcgtccatat tcgatttggt gcgccaatcg cccatcctgc tgcaccaccc
    13021 ctaccaatcg ttcgaccccg ttgtcgaaat gatgcgcgaa gctgccgccg accccgacgt
    13081 gcttgccgtc aaaatgacga tttaccgcac cggcacgcgt tccgaactcg tccgcgccct
    13141 gatgaaggcg gcactcgccg gcaaacaagt aaccgtcgtc gtcgaactga tggcgcgttt
    13201 tgacgaagcc aacaacgtca actgggcgaa gcagctcgaa gaggcgggcg cgcacgtcgt
    13261 gtacggcgtg ttcggctaca aagtccacgc caagatggca ctggtcatcc gccgcgaaga
    13321 cggcgtactc aagcgttacg cccacctcgg cacgggtaac taccaccaag gcacatcgcg
    13381 catctacacc gacttcggca tcattaccgc cgacgaacaa atcaccgccg atgtgaacac
    13441 attgtttatg gaaatcacag gcttgggcaa acccgggcgg ctgaacaaac tctaccaaag
    13501 cccgtttacc ctgcacaaaa tggttatcga ccgcatcgca cgcgaaaccg aacacgcaaa
    13561 agccggcaaa ccggcgcgga ttaccgccaa gatgaattcg ctcatcgaac cgaccgtcat
    13621 cgaagccctg tatcgggcaa gcgcggcagg cgtacaaatc gatttgattg tgcgcggtat
    13681 gtgcaccttg cgcccgggtg taaaaggctt gtccgaaaac atccgcgtcc gctccatcat
    13741 cggcaggcag ctcgaacacg cgcgcgtgta ttgcttccac aacaacggcg cggacgatac
    13801 ctttatctcc agcgcggatt ggatggggcg caacttcttc cgccgcatcg aaaccgccgc
    13861 gccgattgcc gcgcccgaac tcaaaaaacg cgtcatccgc gaaggtttgg aaatggcact
    13921 ggcagacaat acgcacgcgt ggctgatgca gcccgacggc ggctatatcc gcgccgcgcc
    13981 tgccgagggc gaaagcgaag ccgacctgca aaacgatttg tggacactgc tcggaggctg
    14041 acccgcaccg ccccaatcaa aaaccatgcc gtctgaaact tttccgtttc agacggcatg
    14101 gttttacagc aatctaaaca gggcggactg gaatcaaaaa cacaccttcg ccattcccgc
    14161 acaagcactt cccctatacg ctcccaaccc caatccgccg cattccagac ggcattgcct
    14221 ttccgacagc cgaacaaaac cccgaatccg tctgcacggt tcggggcata tctccaatac
    14281 gggcatcgtg ctccggaaaa ccgtcaaatc cgcatcggca tcacaatata tttgaaattc
    14341 ggattgttcg gcacggtaaa cagcgtcgag cggttggcat cgccgaaggc aagctgcata
    14401 tcgtcggaat ggatgttgcg caacacgtcc atcagatagc cgatattgaa accgacttcg
    14461 agttcgccgc cctgataggc aatctcgatt tcttcgcgcg cttcttcctg ctcgttgttg
    14521 ctgcacacga cgctcaacag gccggattgc aggaacaggc gcgcgccacg gaatttttcg
    14581 ttggcaagaa tggacacacg ttccagcgcg cccaaaagtt cggcacggga caaaacgaaa
    14641 atcttgtcgt tgtccaaagg gatgacgcgg ttgaaatcgg ggaatttgcc gtcgataacc
    14701 ttgctgacga tggtcgtgcc gttgcattgg aaacgcacct gcttgtccag cagctcgatt
    14761 tgaatcggat cgtcggggtt gttcaacagt ttgaacagtt ccagcaccgt tttgcgcggc
    14821 aaaatcactt cggcgcgcgg caaatccgca tcaatcgcgc aggctgcata ggcaaggcgg
    14881 tgtccgtcgg tcgccacaag gcgcaactgg ctgccctcaa cctgcatcag cagaccgttg
    14941 agataatagc ggatgtcctg caccgccatg ctgtactgca cttgcgacag catggttttg
    15001 aaacgctcct gctccagcga gaaagtcgcg ctgatgtcct cgccgacatt catcatcgga
    15061 aaatcggcgg caggcagggt ctgcagggca aaacgcgatt tgcccgcctt cagcgtcaga
    15121 cggctgtcgt cccaatccag cgacaccagc gcaccggcag gcagcgcgcg caaaatgtcc
    15181 tgaaatttct tggcattggt ggtgatgcgg aagtcgtccg cgccgccctc gggacccgca
    15241 gtgtcgattt ggatttccaa atcggttgcc aagagtttgg tctgaccgcc ttttccctca
    15301 atcaggacgt tggacaggat gggcagggtg tggcggcgtt cgacgatgcc ggtaacggct
    15361 tgcagcggct tgagcaggct gtcgcgttcg gcttgtaaaa tcaacatgtt cgctccttta
    15421 aatcggttgg attttttacc cttcggacgg catgggcaat atcatgccgt ctgaaaacgt
    15481 tttccatcag ttttgaatca gaatcagcag cttttcataa tcctgagcca attccggatc
    15541 ttcttcgcgc agtttcgcca ctgccctgat gccgtgcata acggtcgtat ggtcgcgccc
    15601 accgaacgaa tcgccgatag acggcaggct caaagtggtc agttctttgg tcaggctcat
    15661 cgccacctgg cgcggacggg caatgttgcg cgtgcgtttt ttgccgagta cgtcgctgat
    15721 tttgatgcgg taatatttgg caacggcatc aataatgata tcggcggtaa tgaccttatg
    15781 cttctcggca ataatgtcct gcaaagcggt acgcgccaaa tcgatgtcga tgacgggacg
    15841 gttcataaag cggctgctcg ctccgacacg gttaaacgcg ccttcaagct cgcgcacgtt
    15901 ggaacggatc agattggcaa tgaacagcgc ggcttcgtct tcaatactga tgcccgccgc
    15961 ttccgccttt ttctgcaaaa tggcgatgcg catttccaat tcgggcggct cgagttccaa
    16021 agtcagtccc catgaaaaac gggatttgag gcggtcgtcc atgccttcga ttttggcggg
    16081 taaaacatcg caagtgagga tcagctgttt tttctcgttg tggaaatggt tgtacagata
    16141 gaaaaactct tccatcgtac ggtcttttcc tttaataaac tgaatatcgt cgataatcag
    16201 caggtcgtat tgcttgtatt gctgcttgaa tacgtcatag gtattgttgc gaaccgcctt
    16261 cataaagctg cggatatagt cgtccgaatg catatagcgc actttggcat cgggacggtt
    16321 tttcaaaagc tcgttgccga ccgcctgtac caggtgggtt ttgcccaaac ccgtgctgcc
    16381 gtacaggaaa aacgggttgt agctctgccc cgggctttcc gcaatcgcct gcgccgcagc
    16441 cgccgcaagg cggttgccct tgccttcgac caatgtgtcg aacgtatagt ccggcgacag
    16501 attggtctgc tcgtaacgtg cctcttccgc atcgcgctgc gcatccgtcc gcgctttcgc
    16561 aagcacctcc gattccggac gggaagcagg ttcggcagta tggcgcggct catgcgggag
    16621 gtttttcata cgttccgcca gaatatccgc cgccgttttc gacgcagcgg gtttgacagg
    16681 ctcttcagac ggcagctcgt ccaacagaac ctcctgcaca ggcatctcct ccgaccccgc
    16741 gtgcaaggac ggctcggcag gttcgacagc accttcaacc gccgccatct cataacgcac
    16801 gccttctcct ggtttgaata cgaaggcgga acggccagca gccaactctt ccctcaccgc
    16861 ttctattttc ccggcaaact ggctcttaag catattgcag gcaaactggt tcttgccgta
    16921 caccacccat acgccaccct cctcaccgac ggtaaggggc gcaatccatt gcgcaaactg
    16981 cccttgaggc aacatatcgt gaagacggcg gaggcacagc ggccaaaact ctgctaatgt
    17041 catggataag ctcgaatcgg taaaaatgaa atcgaaaaca aagaaaatat aatattttca
    17101 aaaagaaaac aaatctgttg aacacacatc ggttcaaaat gcagcgaacc gaattatacc
    17161 gactcgccga tattttatcc acaacccgtg caaaatttat ccacagaaag gcggcagaaa
    17221 tccgcaggca atcgggcaat cctcctgcaa agtttctata ttgattgaca aaagcggcaa
    17281 attggagtgt aattcacggt ttaattatct acccattcta tttttaggaa acatcatgaa
    17341 acgcacttat caaccttccg ttaccaaacg caaacgcacc cacggcttcc tggtgcgctc
    17401 caaaacacgc ggcggccgcg cagtattggc tgcacgccgc gccaaaggcc gcaaacgcct
    17461 ggcggtataa ttttggacta ccgcttcgga aggcagtacc gcttgttgaa aacggatgat
    17521 ttttcatccg tttttgcatt cagaaaccgc cgcagccgcg acctgctgca agtttcgcgt
    17581 tcaaacggca acgggctgga ccatccccgc atcggtctgg tggtcggcaa aaaaaccgcc
    17641 aaacgcgcca acgaacgaaa ttatatgaag cgcgtcatcc gcgactggtt cagattgaac
    17701 aaaaaccggc tgccgccgca ggatttcgtc gtgcgcgtcc accgtaaatt cgacaggtct
    17761 accgcaaaac aggcaagggc ggaactggca caactcatgt tcggcaaccc cgcaaccgga
    17821 tgcaggaaac aggcatgatc agaacggtac tctgcaggca aggttcagac agcaacgggt
    17881 ttcccataca aggaacatcc cgatgaactt cctattgtcc aaactcctgc tgggactgat
    17941 acggttctac caatattgca tcagcccgct gattccgccg cgctgccgct atacgccgac
    18001 ctgttcgcaa tacgccgtcg aagcagtcaa aaaatacggc gcattcaaag gcggccggct
    18061 cgccatcaag cgcattgcac gctgccaccc cctcggcgga cacggacacg accccgttcc
    18121 ctgacccgac gcaatattca aattgcacgc tttcctttta tttcccatcg gtttctatat
    18181 aatgccgtct gaagcttcgg gcaggcggca cgaccgtcgg gtatgaaacc cgcccttatt
    18241 ccccgtctat cggaacacgc aacctgcggc atttccgacc attcaggaaa ctcttatgga
    18301 ttttaaaaga ctcacggcgt ttttcgccat cgcgctggtg attatgatcg gctgggaaaa
    18361 gatgttcccc actccgaagc ccgtccccgc gccccaacag gcagcacaac aacaggccgt
    18421 aaccgcttcc gccgaagccg cgctcgcgcc cgcaacgccg attaccgtaa cgaccgacac
    18481 ggttcaagcc gtcattgatg aaaaaagcgg cgacctgcgc cggctgaccc tgctcaaata
    18541 caaagcaacc ggcgacgaaa ataaaccgtt catcctgttt ggcgacggca aagaatacac
    18601 ctacgtcgcc caatccgaac ttttggacgc gcagggcaac aacattctaa aaggcatcgg
    18661 ctttagcgca ccgaaaaaac agtacagctt ggaaggcgac aaagttgaag tccgcctgag
    18721 cgcgcctgaa acacgcggtc tgaaaatcga caaagtttat actttcacca aaggcagcta
    18781 tctggtcaac gtccgcttcg acatcgccaa cggcagcggt caaaccgcca acctgagcgc
    18841 ggactaccgc atcgtccgcg accacagcga acccgagggt caaggttact ttacccactc
    18901 ttacgtcggc cctgttgttt atacccctga aggcaacttc caaaaagtca gcttttccga
    18961 cttggacgac gatgccaaat ccggcaaatc cgaggccgaa tacatccgca aaaccccgac
    19021 cggctggctc ggcatgattg aacaccactt catgtccacc tggattctcc aacctaaagg
    19081 cagacaaagc gtttgcgccg caggcgagtg caacatcgac atcaaacgcc gcaacgacaa
    19141 gctgtacagc accagcgtca gcgtgccttt agccgccatc caaaacggcg cgaaagccga
    19201 agcctccatc aacctctacg ccggcccgca gaccacatcc gtcatcgcaa acatcgccga
    19261 caacctgcaa ctggccaaag actacggcaa agtacactgg ttcgcctccc cgctcttctg
    19321 gctcctgaac caactgcaca acatcatcgg caactggggc tgggcgatta tcgttttaac
    19381 catcatcgtc aaagccgtac tgtatccatt gaccaacgcc tcttaccgct ctatggcgaa
    19441 aatgcgtgcc gccgcaccca aactgcaagc catcaaagag aaatacggcg acgaccgtat
    19501 ggcgcaacaa caggcgatga tgcagcttta cacagacgag aaaatcaacc cgctgggcgg
    19561 ctgcctgcct atgctgttgc aaatccccgt cttcatcgga ttgtattggg cattgttcgc
    19621 ctccgtagaa ttgcgccagg caccttggct gggttggatt accgacctca gccgcgccga
    19681 cccctactac atcctgccca tcattatggc ggcaacgatg ttcgcccaaa cttatctgaa
    19741 cccgccgccg accgacccga tgcaggcgaa aatgatgaaa atcatgccgt tggttttctc
    19801 cgtcatgttc ttcttcttcc ctgccggtct ggtattgtac tgggtagtca acaacctcct
    19861 gaccatcgcc cagcaatggc acatcaaccg cagcatcgaa aaacaacgcg cccaaggcga
    19921 agtcgtttcc taaatgccgc agcatgaaaa atgccgtctg aaacctgttc agacggcatt
    19981 tttattgccc accccctatc ggggcggaaa tcttcaaccc gcatacatca caaaaatcgt
    20041 cgggcgtttt ttcagattgg gcatttcttt tctttttcgc cactgcacga ttgtttgact
    20101 gatgatttcc tgtgtcggca aggtcaaatc cgtagccgtg cataaacgcg tttcaggatg
    20161 caggttttcc accgcatcgg caagcagcgc atcattgcgg taaggcgttt caataaaaat
    20221 ctgcgtctcg ccgcactggc gcgaacgctg ttccaaagcc cgaaaagcct gaatccgctc
    20281 gtttttttca gacggcagat agcctttaaa cgcaaaactc tgcccgttcg cacccgaagc
    20341 catcaaagcc agcagcaggc tggaaggccc gaccagcgga cgcacttcaa aaccgtgttt
    20401 atgcgccaat gccaccaaat tcgcacccgg atcggccaca gccgggcaac ccgcctcact
    20461 gacaatgccc atactgcgcc cttcttgcaa aggtttcagc aattccggca aagtcttcaa
    20521 atccgtatgt tcattcaacg tttgcagatt cagctcgcgg ataggcgtag tcacgcccaa
    20581 atgtttcaaa tgcgcacgcg ccgttttttc cgcctccacg acaaaatccg tcagcccgac
    20641 aatcgcctgt tgttcatgcg gcaacaggca cggcgtgtca ggcgtaccca aaggcgtagg
    20701 aatcaaatac aaaacaggag acatcattcc ctcactcatc ggttaaaaat gccgtctgag
    20761 cctttcagac ggcataaacg ggcagttaca gaacctccac gccctcattt ttcaagaaat
    20821 cgaccagacg gaaaaccggc aaaccgatta aagcattcgg atcggtactc tcaatccttt
    20881 caatcagcaa tgcacccaaa tcctcactct tcagcgcaca cgaacaataa accgcatcag
    20941 gctcgcgctc caaatagcgg aggatatgca actcgtccaa ctgcctcatc acgaccaccg
    21001 tcttatcgat atgccgccgc atcctgcccg taaccgtatt caacagcacg atcgcgctgt
    21061 aaaactcaat ctccctgccg ctcaagtgca tcagcatctt ttgcgcattg gcaaggttca
    21121 tcggcttgcc ccactgcctg ccgtcgcacc acgccacctg gtccgcaccg acaatcaacg
    21181 cctctgggaa acgcccggtc aacgaccgcg ccttaccctc ggcaaggcgc aatgccgtct
    21241 gaggggcgga ttcccccaac atcggcgttt cgtcaaaatc gggggacgcc gcctgaaagg
    21301 caatgccgag cctttccatc tgttcgcggc ggaaaaccga actcgtaccc aaaatcaaag
    21361 gcagttccaa acccatccca tcctccttac cgttgaaaac acgcccgaag gggcagtaaa
    21421 atccagccat gcgccgaaac acggataccc gccttcggcg taccgcaaca tttttcttaa
    21481 aaatattgac gttagaacat ctaaattata tcatatcccg tttatgtcag accctaattt
    21541 gattgacttg gaaatttttg ccgccgaagg gcagaacctg caaggcagtt ttctgctgga
    21601 agaattggat gaacgcgtca gttcgcacga ttatcccgcc gacaggcaga ccaaaatatc
    21661 gtttacactg accggcggtc gcgaccggct gcaacgcctg ttcctcgacc tgaacgtcaa
    21721 agccgatatg cccctgattt gccagagatg tatcaaaccc atgccgttca tgcttgatga
    21781 aagcagccgt atcgtcctgt tttccaacga agagtccttg gacgaatcca tgcttgccga
    21841 cgaagaactc gaaggcatac tgattgaaaa agaactcgac gtgcgcacat tggtagaaga
    21901 ccaaatcctg atgtccctgc ccttttcgcc gcgacacgaa gactgcggcg acaatgggac
    21961 actggaagaa gtcaatcggg acaaacccaa cccctttgct gttttggcag gtttgaaaag
    22021 caattgatta ggacacagtt tatttatcta ggagcttgaa atggccgttc aacaaaacaa
    22081 aaaatcccct tccaaacgcg gtatgcaccg ttcgcacgac gcgctgaccg cgcctgcact
    22141 gtctgtcgac agcacaaccg gcgaagtaca ccgcccgcac cacatctccc ccaacggtat
    22201 gtaccgcggc cgcaaagtgg tcaaagccaa aggcgaataa tccctattcg actgactgaa
    22261 aaagccagaa cattgccatg caattactgg ctttttttgc attggacgca ccatccgtcc
    22321 aaactttcgc catacgtcaa cacacagggg caaagcgttc cgtataatac cccgtgaaaa
    22381 tattccaaaa gccccaacca ccaaggaaat tccgatgaaa cagaaaatct ggtacaccta
    22441 cgatgacatc caccgcgtca tcaaagcatt ggcagaaaaa atccggaacg ccgacatcaa
    22501 atacgatgcc atgattgcca tcggcggcgg cggctttatt ccggcacgta tgctgcgctg
    22561 ttttctggaa attccgattt atgccgtaac caccgcctat tacgacagcg acaacgaagg
    22621 acaggttacc gaagaagtca aaaaagtcca atggctagac cccgtccccg aagccttacg
    22681 gggtaaaaac gtccttgttg tcgacgaagt ggacgacagc cgcgtaacca tggaattttg
    22741 cctgacagag ctgctcaaag aagacttcgg caccatcggc gtcgccgtac tgcacgaaaa
    22801 aatcaaagcc aaagcaggta aaatccccga aggcattccc tatttcagcg gcatcaccgt
    22861 agaagactgg tggatcaact atccgtggga cgcactcgac atcgacgaac acaaccgcct
    22921 tgccgaggcc ggccgaggct gaccctttca gacggcatat tttccgaacc gatgccgtct
    22981 gaagcccgca cgacccctgc cgcagaccga aaacctaccg gagaacccta tgattacact
    23041 tgccgtagat gccatgggcg gcgaccaagg acttgccgtt accgtacccg gcgcaacagc
    23101 attcctccaa gcacaccccg atgtccgcct gattatgacc ggcgacgaaa cgcaactgcg
    23161 ccaagccctg accgcggcag gcgcaccgat ggaacgcatc gacatctgcc ataccaccca
    23221 agttgtcggc atggatgaat cccctcagtc cgccctaaag aacaaaaaag actcctccat
    23281 gcgcgttgcc atcaaccaag ttaaagaagg caaagcccaa gccgccgtat ccgcaggcaa
    23341 cacgggcgca ctcatggcaa ccgcacgttt cgtcctcaag accatacccg gtatcgaacg
    23401 ccccgccatc gccaaattcc tcccgtccga caccgaccat gttaccctcg ccctcgacct
    23461 tggcgcgaac gtcgactgca cgcccgaaca gctcgcccaa tttgccgtta tcggcagcga
    23521 actcgtccac gcactccatc ctcaaaaagg acagccgcgc gtcgggctgg tcaacgtcgg
    23581 cacggaagac atcaaaggta cggacaccgt caaacaaacc tacaaactgc tgcaaaacag
    23641 caaactcaac tttatcggca acatcgaaag caacggcatc ctgtacggcg aagcagatgt
    23701 cgtcgtcgcc gacggctttg tcggcaacgt catgctcaaa accatcgaag gcgcggtcaa
    23761 attcatgagc ggagccatcc gccgcgaatt ccaaagcaac ctgttcaaca aacttgccgc
    23821 cgttgccgcc ctacccgccc tcaaagggct gaaaaacaaa ctcgatccgc gcaaattcaa
    23881 cggggccatc ctgctcgggc tgcgcggcat cgtcatcaaa agccacggcg gcacagacga
    23941 aaccggtttc cgctacgcac tcgaagaagc ctaccacgaa gccaagtccg ccggcctttc
    24001 caaaatcgaa caaggcgttg ccgaacaact cgccgcactc gaaactgcca aagccgtcca
    24061 aaacgaaaat gccgacggtc tgtaacacac acgatgccgt ctgaacgccc ccgccccttt
    24121 cagacggcat ccgcccgcac caaacctgcg ggcgcggacg gcgatgcgcc tgtccggcac
    24181 ttcccaaata cttccctgta aaataaggag tatttgaaaa atgaagacat tagaaaaacg
    24241 gatgaaagct ctagacaaac agatgatgaa gttcggaaaa tcccttgaag gcaggcttga
    24301 tgcccgtctg attgaatccg cattggatta tattcattat tcggaacgtt ttttggcttt
    24361 tgaaatcctg tgtacttata tcgaagattt cgatgtccgg ctgacggaac aagaatcccg
    24421 ggaaatttct tttatcaaca aggaatttga gatagaaagc acgtccgatt aaccaataaa
    24481 gccaatgggt tgataaacat gaaaacatcg acggtcgttt ttggcggatt ttttatggca
    24541 gacaacggag agcgaatcca aatccccgtt ttggaaaatc ctgacattag ggaaatcaat
    24601 cacttttttt ccgtatcaaa ttttgagaaa aaaaccggcg tccttgtttt cagaatcatc
    24661 cccgagccgg aatttggcaa taccgaatta actgtctatt ttgaaaaagg atattatttg
    24721 ccaatgattc aaacaatttt agaaggcggg gatattgaag tcaaaaacct taaaacggaa
    24781 aattatagtg gaaatacaat ggaaatttgg ggagattcct accctattga gcatatctct
    24841 aaaaatattt ctacaattca aaatataatt tctgaattta tgatacaaaa acaaacaccg
    24901 gcaccaataa tttgatggaa aaccaacaat caaaatgccg tctgaagcat gtttggtttt
    24961 cagacggcat ttccttcgct taaaacagcg tatcggcaac cccgccctgc ctgtccacgg
    25021 caatctgcat ctgaaaacca tctgtatccc aaaccacacc cccatccctg tttccgtcat
    25081 ttgcaccctg cccgtattgg gcaatcatcg gtttttcgct tacaatagcc gaatctgaac
    25141 caactatcca aaaaggccgt tcccatgcag tatgccaaaa tttccggcac gggcagctat
    25201 cttcccgcca accgcgtcag caatgacgac cttgcccaaa aagtggatac ctcggacgag
    25261 tggattaccg cgcgtacggg catcaagttc cgccatattg cagccgaaaa tgagaaaacc
    25321 agcgatcttg ccgccgaagc agcccgccgc gcactggatg cagccggatt agacagcggc
    25381 gaaatcgatt tgattatcgt ggcgacggca acgccggata tgcagtttcc ttctaccgcc
    25441 accatcgtgc agcaaaaatt gggcatcacc aacggctgtc ccgcgtttga cgtacaggca
    25501 gtgtgcgcag gctttatgta cgcgctgacc actgcaaacg cctacatcaa aagcggcatg
    25561 gcaaaaaacg cgctggtcat cggcgcggaa accttcagtc gcattgtaga ctggaacgac
    25621 cgcacaacct gcgtattgtt cggcgacggc gcgggcgcgg tggttttgag cgcggcggac
    25681 aaaccgggca tcatccacag caaactcaaa gccgacggca attatctgaa actcttaaac
    25741 gtccccgggc aaatcgcctg cggcaaagtt tccggttcgc cgtacatttc gatggacggt
    25801 cccggcgtgt tcaagtttgc cgtcaaaatg ctgtccaaaa tcgccgatga cgttatcgaa
    25861 gaagccggtt acaccgccgc tcaaatcgac tggatcgtgc cgcatcaggc aaaccgccgc
    25921 attatcgaat cgaccgcgaa acatttgggg ctgagtatgg acaaagtcgt cctgaccgtc
    25981 caagaccacg gcaacacgtc cgccgcctcg attccgctgg ctttggatac aggcatccgc
    26041 agcggacaaa tcaaacgcgg tcaaaacctg ctgctcgaag gcatcggcgg tggtttcgcg
    26101 tggggcgcgg tgctgttgca atattgaacc cgatgccgtc tgaagcaggt tttcagacgg
    26161 catttcccat atcatgaagc ggcaggcttt cttcaaacca attgcgtgtg cggcatttct
    26221 gtctgccgtt tcgctgcgcc tccccgtatt gggcgcgtgt tacgcaatat tgtccctcta
    26281 tgcgtttgca ctttacagca tcgacaaacg gcgtgccgtg cggggaaaac gccgcattcc
    26341 cgaacaccgc ctgctgctgc ctgccttgtt cggcggttgg gcgggcgcat acttgggcag
    26401 caggatattc aggcataaaa cggcgaaaaa gcgttttgtt gtgctgttcc gtctgactgt
    26461 ttcaggtaat gtcctggcga ccctcatcct g
//
LOCUS       DAWGKF010000008        26431 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.008, whole genome shotgun sequence.
ACCESSION   DAWGKF010000008 DAWGKF010000000
VERSION     DAWGKF010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 26431)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26431)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26431
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.008"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            182..538
                     /locus_tag="WHR07_000227"
     CDS             182..538
                     /locus_tag="WHR07_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEZ2129499.1"
                     /translation="MLSAYFPVFVFILIGLAAGVLFILLGTILGSKRHYAEKDAPYEC
                     GFEAFENARMKFDVRYYLVAILFILFDLEVAFMLPWAVVFKDLGAYGFWSMLVFIVVL
                     TVGFIYEWKKGALEWE"
     gene            529..1011
                     /locus_tag="WHR07_000228"
     CDS             529..1011
                     /locus_tag="WHR07_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HEZ2129500.1"
                     /translation="MGIEGVLKKGFITTSADTVLNYMRTGSLWPVTFGLACCAVEMMH
                     AGMARYDLDRFGIIFRPSPRQADLMIVAGTLTNKMAPALRRVYDQLAEPRWVLSMGSC
                     ANGGGYYHYSYSVVRGADRVVPVDVYVPGCPPTAEALIYGLIQLQQKIKRTSTIARDE
                     "
     gene            1024..1617
                     /locus_tag="WHR07_000229"
     CDS             1024..1617
                     /locus_tag="WHR07_000229"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEZ2129501.1"
                     /translation="MASIQNLYETVVGVLGDQASKVISALGEITVECLPEHYVSVMTT
                     LRDHEELHFELLVDLCGVDYSTYKNEVWQGKRFAVVSQLLSVQNNQRIRVRVWVSDDD
                     FPVVESVVDIYNSADWYEREAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGY
                     VEMRYDEEQKRVIYQPVTIEPREITPRIVREENYGGQ"
     gene            1607..2863
                     /gene="nuoD"
                     /locus_tag="WHR07_000230"
     CDS             1607..2863
                     /gene="nuoD"
                     /locus_tag="WHR07_000230"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HEZ2129502.1"
                     /translation="MANKLRNYTINFGPQHPAAHGVLRMILELEGETIVRADPHIGLL
                     HRGTEKLAETKTYLQALPYMDRLDYVSMMVNEQAYCLAVEKLAGIDVPIRAQYIRVMF
                     AEVTRILNHLMGIGSHAFDIGAMTAILYAFRDREELMDLYEAVSGARMHAAYFRPGGV
                     YRDLPDFMPKYEGSKFRNAKVLKQLNESREGTMLDFIDAFCERFPKNIDTLETLLTDN
                     RIWKQRTVGIGVVSPERAMQKGFTGVMLRGSGVEWDVRKTQPYEVYDKMDFDIPVGVN
                     GDCYDRYLCRMEEMRQSVRIIKQCSEWLRVNPGPVITTNHKFAPPKRTEMKTGMEDLI
                     HHFKLFTEGMHVPEGETYTAVEHPKGEFGVYIISDGANKPYRLKIRAPGFAHLQGMDE
                     MAKGHMLADVVAIIGTQDIVFGEVDR"
     gene            2863..3336
                     /gene="nuoE"
                     /locus_tag="WHR07_000231"
     CDS             2863..3336
                     /gene="nuoE"
                     /locus_tag="WHR07_000231"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HEZ2129503.1"
                     /translation="MLSAESLKQIDTELAKYPADQRRSAIMGALRIAQTEKGWLAPET
                     IAFVADYIGITPAQAYEVATFYNMYDLEPVGKYKLTVCTNLPCALRGGMATGEYLKQK
                     LGIGYGETTPDGKFTLVEGECMGACGDAPVMLVNNHSMCSFMTEEAIEKKLAELE"
     gene            3726..5027
                     /gene="nuoF"
                     /locus_tag="WHR07_000232"
     CDS             3726..5027
                     /gene="nuoF"
                     /locus_tag="WHR07_000232"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HEZ2129504.1"
                     /translation="MAIYQSGVIFDQVDTANPDCWTLDEYVKRGGYTALRKILSENIS
                     QTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGEKYVVCNTDEGEPGTFKDRDII
                     MFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALEQARAAGFLGKNILGS
                     DFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTET
                     FSSVSFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGTPFAEILKMAGG
                     MRGGKKLKAVIPGGSSAPVLPADIIMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVK
                     ALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDSIGNQMAGRT
                     ICALADAAVFPVRSFTKHFRDEFVHYIEHGGPMKEHKWGGW"
     gene            5027..5464
                     /locus_tag="WHR07_000233"
     CDS             5027..5464
                     /locus_tag="WHR07_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129505.1"
                     /translation="MVEAKIFILYGAANKGKSTTLNTLFNQICRKFSKFLVFFERHGN
                     GLDFVAVFDHEGQRIGFYSSGDNEYEVRRNLYKLYSHNCDFIFGTSRTRGGSCDAVGC
                     YAELLHGDVNIINWCEKFEPTDEDNERAVKELFKSFKNIINKL"
     gene            5752..8013
                     /locus_tag="WHR07_000234"
     CDS             5752..8013
                     /locus_tag="WHR07_000234"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit G"
                     /protein_id="HEZ2129506.1"
                     /translation="MLQIEIDGKQVSVEQGATVIEAAHKLGTYIPHFCYHKKLSIAAN
                     CRMCLVNVEKAPKPLPACATPVTDGMIVRTHSAKAREAQEGVMEFLLINHPLDCPTCD
                     QGGECQLQDLAVGYGKTTSRYTEEKRSVVGKDMGPLVSAEEMSRCIHCTRCVRFTEEI
                     AGLQEIAMVNRGEHSEIMPFIGKTVETELSGNVIDLCPVGALTSKPFRFNARTWELNR
                     RKSVSAHDALGSNLIIQTKDHTVRRVLPLENEAINECWLSDRDRFAYEGLYHESRLKN
                     PKIKQGGEWMDVDWKTALEYVRSAIECIAKDGNQNQVGVWANPMNTVEELYLAKKLAD
                     GLGVKNFATRLRQQDKRLSDGIKGAQWLGQSIESLADNDAVLVVGANLRKEQPLLTAR
                     LRRAAKDRMALSVLAGSKEELLMPLLSQEAAHPDEWAGRLKNLSANAEHAVTASLKNA
                     EKAAVILGAEVQNHPDYAAIYAAAQELAAATGAVLGILPQAANSVGADVLGVNSGESV
                     AEMANAPKQAVLLLNVEPEIDTADGAKAVAALKQAKSVMAFTPFVSETLLDVCDVLLP
                     IAPFTETSGSFINMEGRLQSFHGVVQGFGDSRPMWKVLRVLGNLFDLQGFEYHDTAAI
                     LKDALDVESLPSKLDNRNTWTGEGVQTTSDRLVRVGGVGIYHTDSIVRRSAPLQETGH
                     AAVPAARVNPNTLARLGLQNGQTAVAKQNGASVSVAVKADAGLPENVVHLPLHTENAA
                     LGALMDTIELAGA"
     gene            8016..9092
                     /gene="nuoH"
                     /locus_tag="WHR07_000235"
     CDS             8016..9092
                     /gene="nuoH"
                     /locus_tag="WHR07_000235"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HEZ2129507.1"
                     /translation="MQEWFQNLFAATLGLGDLGITVGLVVSVIVKIVIILIPLILTVA
                     YLTYFERKVIGFMQLRVGPNVTGPWGLIQPFADVFKLLFKEVTRPKLSNKALFYIGPI
                     MSLAPSFAAWAVIPFNEEWVLTNINIGLLYILMITSLSVYGVIIAGWASNSKYSFLGA
                     MRASAQSISYEIAMSAALVCVVMVSGSMNFSDIVAAQAKGIAGGSVFSWNWLPLFPIF
                     IVYLISAVAETNRAPFDVAEGESEIVAGHHVEYSGFAFALFFLAEYIFMILIAALTSL
                     MFLGGWLSPFPQSWGFIGTPSAFWMFVKMAAVLYWYLWIRATFPRYRYDQIMRLGWKV
                     LIPIGFAYIVILGVWMISPLNLWK"
     gene            9173..9652
                     /gene="nuoI"
                     /locus_tag="WHR07_000236"
     CDS             9173..9652
                     /gene="nuoI"
                     /locus_tag="WHR07_000236"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HEZ2129508.1"
                     /translation="MANLVKTFLLGELVKGMGVTLKNFFARKDTIYFPEEKTPQSVRF
                     RGLHAQRRYPNGEERCIACKLCEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFC
                     GFCEEACPTDAIVETHIFEYHGEKKGDLHMTKPILLAIGDKYEAEIAKRKAADAPYR"
     gene            9664..10335
                     /locus_tag="WHR07_000237"
     CDS             9664..10335
                     /locus_tag="WHR07_000237"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEZ2129509.1"
                     /translation="MTFSAILFYILAAIVLYGALRTVTAKNPVHAALHLVLTFCVSAM
                     LWMLMQAEFLGVTLVVVYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLL
                     AVALILILVNPKTDLAAFGLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMV
                     AAIALVHRKTVNPKRMDPADQVKVRADQGRMRLVKMEAVKPQTESAEESEVSDDLKPK
                     EEGKA"
     gene            10332..10637
                     /gene="nuoK"
                     /locus_tag="WHR07_000238"
     CDS             10332..10637
                     /gene="nuoK"
                     /locus_tag="WHR07_000238"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEZ2129510.1"
                     /translation="MITLTHYLVLGALLFGISAMGIFMNRKNVLVLLMSIELMLLAVN
                     FNFIAFSQHLGDTAGQIFVFFVLTVAAAESAIGLAIMVLVYRNRQTINVADLDELKG"
     gene            10671..11246
                     /locus_tag="WHR07_000239"
     CDS             10671..11246
                     /locus_tag="WHR07_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine monophosphate-protein transferase
                     NmFic"
                     /protein_id="HEZ2129511.1"
                     /translation="MPSENPIGKTMKSIDEQSLHNARRLFESGDIDRIEVGTTAGLQQ
                     IHRYLFGGLYDFAGQIREDNISKGGFRFANAMYLKEALVKIEQMPERTFEEIIAKYVE
                     MNIAHPFLEGNGRSTRIWLDLVLKKNLKKVVNWQNVSKTLYLQAMERSPVNDLELRFL
                     LKDNLTDDVDNREIIFKGIEQSYYYEGYEKG"
     gene            11370..11711
                     /locus_tag="WHR07_000240"
     CDS             11370..11711
                     /locus_tag="WHR07_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129512.1"
                     /translation="MMDKNQLEQEFHKAMLNIYQEALNLPQPYKATRFLQIVNEFGGK
                     EAADKLLSTGEKKTQTGFTELILSGGGVHALKYSMEYLVLQKPWCDLFTEEQLAVARK
                     RLERVGFVSPK"
     gene            11760..13784
                     /gene="nuoL"
                     /locus_tag="WHR07_000241"
     CDS             11760..13784
                     /gene="nuoL"
                     /locus_tag="WHR07_000241"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEZ2129513.1"
                     /translation="MNDMTLYLIIALVPLAGSLIAGLFGNKIGRAGAHTVTILGVAVS
                     AVLSAYVLWGFIDGSRAKFDENVYTWLTMGGLDFSVGFLVDTMTAMMMVVVTGVSLMV
                     HIYTIGYMHDEKIGYQRFFSYISLFTFSMLMLIMSNNFIQLFFGWEAVGLVSYLLIGF
                     YFKRPSATFANLKAFLINRVGDFGFLLGIGLVLAYFGGSLRYQDVFAYLPNVQTATIQ
                     LFPSVEWSLITVTCLLLFVGAMGKSAQFPLHVWLPDSMEGPTPISALIHAATMVTAGL
                     FMVSRMSPIYEMSSTALSVIMVIGAITALFMGFLGVIQNDIKRVVAYSTLSQLGYMTV
                     ALGASAYSVAMFHVMTHAFFKALLFLAAGSAIIGMHHDQDMRHMGNLKKYMPITWLTM
                     LIGNLSLIGTPFFSGFYSKDSIIEAAKYSTLPGSGFAYFAVLASVFVTAFYAFRQYFM
                     VFHGEEKWRSLPEHHSDGHGEEHHGLGKNDNPHESPLFVTLPLILLAIPSVIIGYVAI
                     GPMLYGDFFKDVIFVNTDAHPTMHIMKEEFHGALAMVSHSLHSPVLYLAIAGVLSAWL
                     LYVKLPHLPAKIAQAFRPVYVLFENKYYLDALYFNVFAKGTRALGTFFWKVGDTAIID
                     NGIVNGSAKLVGAIAAQVRKAQTGFIYTYAAAMVFGVLVLLGMTFWGLFR"
     gene            13873..15369
                     /locus_tag="WHR07_000242"
     CDS             13873..15369
                     /locus_tag="WHR07_000242"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEZ2129514.1"
                     /translation="MFSNYLLSLAIWIPIAAGVLVLATGSDSRAPLARVLAFMGALAG
                     FLVTLPLFTGFDRLSGGYQFTEFHEWIPLLKINYALGVDGISVLFIILNAFITLLVVL
                     AGWEVIQKRPAQYMAAFLMMSGLINGAFAAQDAILFYVFFEGMLIPLYLIIGVWGGPR
                     RVYASVKLFLYTLMGSLLMLVAMVYLYYQTGSFSIVDFQNIKQIPLGVQQLLFVAFFL
                     SFAVKVPMFPVHTWLPDAHVEAPTGGSMVLAAITLKLGAYGFLRFILPIMPDAARYFA
                     PVIIVLSLIAVIYIGMVALVQTDMKKLVAYSSISHMGFVTLGMFLFVDGQLDDWALKG
                     AIIQMISHGFVSAAMFMCIGVMYDRLHTRNIADYGGVVNVMPKFAAFMMLFGMANAGL
                     PATSGFVGEFMVIMGAVKVNFWVGALAAMTLIYGASYTLWMYKRVIYGAIHNPHVAEM
                     KDINCREFAILAVLAVAVLGMGLYPNAFIEVVHQAANDLIAHVAQSKI"
     gene            15379..16824
                     /gene="nuoN"
                     /locus_tag="WHR07_000243"
     CDS             15379..16824
                     /gene="nuoN"
                     /locus_tag="WHR07_000243"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HEZ2129515.1"
                     /translation="MNWSDLNLMPALPEIALLSLLVLLLLADLWVSDDKRRWTHYGAL
                     ATVAVTAVVQLAVWEQGSTSSFNGMYIADGMSRLAKMVLYALTFALFVYAKPYNQVRG
                     IFKGEFYTLSLFALLGMSVMVSTGHFLTAYIGLELLSLALYALIALRRDSGFAAEAAL
                     KYFVLGALASGLLLYGISMVYGATGSLEFAGVLASSFNEEANEWLLKLGLVFIVVAVA
                     FKLGAVPFHMWVPDVYHGAPTSVTALVGTAPKVAAVVFAFRILVTGLGTVHHDWSLMF
                     ALLAAASLLVGNLAAIMQTNIKRMLAYSTVSHMGFILLAFMAGAVGFAAGLYYAITYA
                     LMAAAGFGVLMVLSDGDNECENISDLAGLNQHRVWLAFLMLLVMFSMAGIPPLMGFYA
                     KFGVIMALLKQGHVWLSVFAVVMSLIGAFYYLRVVKVMYFDESGRARPTVGGNNAAKF
                     LLSVNALLLVLWGIMPQTVIDWCAKALENTL"
     gene            16936..17235
                     /locus_tag="WHR07_000244"
     CDS             16936..17235
                     /locus_tag="WHR07_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2818 family protein"
                     /protein_id="HEZ2129516.1"
                     /translation="MTASMYILLLLALIFANAPFLTTRLFGIVPLKRKHFGHHLIELA
                     AGFALTAVLAYILESRAGAVHDQGWEFYATVVCLYLIFAFPCFVWRYFWHTRNRE"
     gene            complement(17344..18240)
                     /locus_tag="WHR07_000245"
     CDS             complement(17344..18240)
                     /locus_tag="WHR07_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEZ2129517.1"
                     /translation="MNPTNDLKAWQQRAQAQTELLLERFLPSENEIPHTLHEAMRYAA
                     LDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGK
                     PTCHIQYDEATALLVGDALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQ
                     AIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLG
                     LAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKLMGLEAARSYAHKLVAEAVALL
                     EPFGDKALRLRQLAEFAVARKY"
     gene            complement(18224..18448)
                     /locus_tag="WHR07_000246"
     CDS             complement(18224..18448)
                     /locus_tag="WHR07_000246"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEZ2129518.1"
                     /translation="MKKNAPKSFEEALSRLESLTQSMQGEMPLEDALAAYQEGNELVR
                     YCQTKLAQVEQKLQVLDADGLKELNLESDE"
     gene            complement(18509..18685)
                     /locus_tag="WHR07_000247"
     CDS             complement(18509..18685)
                     /locus_tag="WHR07_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009346047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII"
                     /protein_id="HEZ2129519.1"
                     /translation="MPSEAGFGFQTASVFQKCYNPLFTGTSETMFQHAGRHLKHRPMC
                     RPDLEGLTPLPNKV"
     gene            complement(18712..19635)
                     /gene="rsgA"
                     /locus_tag="WHR07_000248"
     CDS             complement(18712..19635)
                     /gene="rsgA"
                     /locus_tag="WHR07_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HEZ2129520.1"
                     /translation="MPSEHPFSDGISTPNPKETMNDTAQITASYGRRYIVRTPDGTTY
                     EASTRKKRVDFACGDRVRISPVNAEQVVIEDFLPRQSLLYRQDAWKTKLIAANVTQLL
                     IVTAAVPSPSVRLLQRALLAAEAAGIRAVIVLNKADLPETALWREKLKFYETLGYPVI
                     ETRALENAGSLRPALQGHSNILLGQSGMGKSTLTNALLGSQTARTGDISAALDSGKHT
                     TTHARLYDLNGETQLIDSPGLQEFGLHHLQAADLPRYFPDFRHLVGQCRFHNCTHRAE
                     PGCAFKAAAETGAASPERLAFLQGITDELPG"
     gene            complement(19640..21496)
                     /locus_tag="WHR07_000249"
     CDS             complement(19640..21496)
                     /locus_tag="WHR07_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ2129521.1"
                     /translation="MLNKIFSWFESRIDPYPEAAPKTPEKGLWRFVWSSMAGVRKWIA
                     ALAALTAGIGIMEALVFQFMGKIVEWLGKYAPAELFAEKGWELAAMAAMMVFSVAWAF
                     AASNVRLQTLQGVFPMRLRWNFHRLMLNQSLGFYQDEFAGRVSAKVMQTALALRDAVM
                     TVADMVVYVSVYFITSGVILASLDSWLLLPFIGWIVGFASVMRLLIPKLGQTAAWQAD
                     ARSLMTGRITDAYSNIATVKLFSHGAREAAYAKQSMEEFMVTVRAQMRLATLLHSCSF
                     IVNTSLTLSTAALGIWLWHNGQVGVGAVATATAMALRVNGLSQYIMWESAQLFENIGT
                     VGDGMATLSKPHTILDKPNALPLKVSQGAIKFEHIDFCYEAGKPLLNGFNLTIRPGEK
                     VGLIGRSGAGKSTIVNLLLRFYEPQSGTVSIDGQDISGITQESLRAQIGLVTQDTSLL
                     HRSVRDNIIYGRPDATDAEMVSAAERAEAAGFIPDLSDAKGRRGYDAHVGERGVKLSG
                     GQRQRIAIARVMLKDAPILLLDEATSALDSEVEAAIQESLDKMMDGKTVIAIAHRLST
                     IAAMDRLVVLDKGRIIEEGTHAELLEKRGLYAKLWAHQSGGFLNEHVEWQHD"
     gene            complement(21522..21659)
                     /locus_tag="WHR07_000250"
     CDS             complement(21522..21659)
                     /locus_tag="WHR07_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129522.1"
                     /translation="MPSEGGAAFALTKPCVSASRCLPDGFSRKMALLSFLSDGIVFDA
                     V"
     gene            complement(21659..22243)
                     /gene="ruvA"
                     /locus_tag="WHR07_000251"
     CDS             complement(21659..22243)
                     /gene="ruvA"
                     /locus_tag="WHR07_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEZ2129523.1"
                     /translation="MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGES
                     VQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGGIGAKTALGILSAMTADELARAV
                     AEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDGLFAAAPAADETEDIVSTLLA
                     LGYSEREAKAAVKGVPEGTDVGEGVRLALKNLLK"
     gene            complement(22325..22651)
                     /locus_tag="WHR07_000252"
     CDS             complement(22325..22651)
                     /locus_tag="WHR07_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEZ2129524.1"
                     /translation="MNFKRLLLTAAATALLSISAPALAHHDGHGDDDHGHAAHQHNKQ
                     DKIISRAQAEKAALARVGGKITDIDLEHDNGRPHYDVEIVKNGQEYKVVVDARTGRVI
                     SSRRDD"
     gene            complement(22705..23424)
                     /locus_tag="WHR07_000253"
     CDS             complement(22705..23424)
                     /locus_tag="WHR07_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEZ2129525.1"
                     /translation="MTLTRKTLFLLTAAFGTHSLQTASADAVVKAEKLHASANRSYKV
                     AGKRYTPKNQVAEFTQTGNASWYGGRFHGRKTSGGERYDMNAFTAAHKTLPIPSYVRV
                     TNTKNGKSVIVRVNDRGPFHGNRIIDVSKAAAQKLGFVSQGTAHVKIEQIVPGKSAPV
                     AENKDIFIDLKSFGTEHEAQAYLNQAAQNFAASTSSPNLAIEKRRYEYVVKMGPFASQ
                     ERAAEAEAQARGMVQTVLTAG"
     gene            complement(23421..23543)
                     /locus_tag="WHR07_000254"
     CDS             complement(23421..23543)
                     /locus_tag="WHR07_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HEZ2129526.1"
                     /translation="MPSENLSGHIPNRRPHCTAVRNVSGGHDAHSSSTQERNTF"
     gene            complement(23554..24018)
                     /gene="trmL"
                     /locus_tag="WHR07_000255"
     CDS             complement(23554..24018)
                     /gene="trmL"
                     /locus_tag="WHR07_000255"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HEZ2129527.1"
                     /translation="MFTIVLYQPEIPPNTGNIIRLCANTGADLHLVKPLGFPLDSAKM
                     KRAGLDYHEFASLTVYENFDDCLKALAGRRIFALTTKGTARPDETAFQKGDVLLFGPE
                     TRGLPADILDSLPAAQKIRLPMQPGSRSMNLSNTVAVILFEAWRQHGYAGGV"
     gene            complement(24083..24580)
                     /locus_tag="WHR07_000256"
     CDS             complement(24083..24580)
                     /locus_tag="WHR07_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HEZ2129528.1"
                     /translation="MWASLHYEPPVSNMIHALKHLADLSMVQPLADLMMQNPPDRLAD
                     ECFDFVLPVPLSRERLLQRGFNQSESIVGLLAQRYGWQILPRHTVFRHHRPPQSTLKG
                     SERRRNIKNAFEIRTPIPENCNILLIDDVFTTGATLDELAKTLKKSGANRICCWTLAR
                     TPMKK"
     gene            24636..25550
                     /gene="bioH"
                     /locus_tag="WHR07_000257"
     CDS             24636..25550
                     /gene="bioH"
                     /locus_tag="WHR07_000257"
                     /EC_number="3.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HEZ2129529.1"
                     /translation="MCLKHRGQLFAASVRYAAKSSRQPAQMPSETPDEPWHNTQRLIV
                     GASAMRRQRERKSMPDAVKKVYLIHGWGANRHMFDDLMPRLPATWPVSAVDLPGHGDA
                     PFAQPFDIEAAADAVAAQIDTPADILGWSLGGLVALYLAARHPDKVRSLCLTASFARL
                     TAAEDYPEGLAAPALGKMVGAFRSDYAKHIKQFLQLQLLHTPDADGIIGRILPDLARC
                     GTPSALQEALDAAERADARHLLDKIDVPVLLVFGGKDAITPPRMGEYLHRHLKGSRLV
                     VMEKAAHAPFLSHAEAFAALYRDFVEGV"
     gene            25552..26340
                     /locus_tag="WHR07_000258"
     CDS             25552..26340
                     /locus_tag="WHR07_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEZ2129530.1"
                     /translation="MNPQDKCWQVHRHLAEYADQRLTLVRNAPKYILLAGADADISRS
                     LLAKRYPQAVFEEYDSRADFLAAAAAARKGGFWQRFTGKGVVQHCQSPIAPLPEACAD
                     MLWSNLGLLAAEQILPVLHNWACALKTDGLLFFTCFGRDTFTELKCRLKENGIESRSV
                     MFPDMHDLGDMLAENGFYDPVTDTAKLVLDYKKAETFWADMDTLGVWRAMAWNDENAA
                     RSCVGTIFEREGGLGITLETVYGHAVKKLMLPQGENVVQFFPKR"
BASE COUNT         5679 a         6749 c         7455 g         6548 t
ORIGIN      
        1 cgaattacgg tgtaaaaatt tatatgacct tataaaatca aataagaatc gttatcataa
       61 catgattgta tttattgggt ttttttgggc gttttgccga tatttacctt ttaatggttt
      121 ttgaaattcg ctaaaatacg aaattattgt agaaattttg ttaacggatt tgggtgtaac
      181 catgttgtcc gcttactttc ccgtctttgt ctttatcctc atcggcctcg cggccggcgt
      241 actgtttatc ctgctcggca caattttggg ctcgaaacgt cactatgccg aaaaagacgc
      301 accttacgaa tgcggttttg aagcctttga aaacgcaagg atgaagttcg acgtgcgcta
      361 ttacctcgtc gccatcctct ttatcttgtt tgatttggag gtcgcgttta tgttgccgtg
      421 ggcagtcgtg ttcaaagatt tgggcgcgta cggcttctgg tctatgctgg tgtttatcgt
      481 cgttctgacg gtaggcttta tttacgaatg gaaaaaaggt gcgctggaat gggaatagaa
      541 ggcgttttga aaaaaggttt catcaccacc agcgcggata cggtgctgaa ctatatgcgt
      601 accggttcgt tgtggccggt tactttcggc ttggcctgct gcgccgtgga aatgatgcac
      661 gcgggtatgg cgcgttatga ccttgaccgt ttcggcatca ttttccgtcc gtccccacgt
      721 caggccgacc tgatgattgt ggcaggtacg ctgaccaaca aaatggcgcc cgccctgcgc
      781 cgcgtgtacg accagcttgc cgagccgcgc tgggtgttgt ctatgggttc gtgtgcaaac
      841 ggcggcggct attatcacta ttcttattcc gtcgtgcgcg gtgccgatcg cgtcgtgccg
      901 gtagacgttt atgtgccggg ttgtccgccg actgcggaag ccctgattta cggcctgatt
      961 cagctccaac aaaaaatcaa gcgcacttcc accatcgcgc gtgacgagta aggagaggac
     1021 gatatggcaa gcattcaaaa cttatacgag accgtcgtcg gcgtgcttgg cgatcaggca
     1081 agcaaagtca tttcagcttt gggcgagatt accgtcgagt gtctgcctga acactatgtt
     1141 tcagtgatga ctacgctgcg cgaccatgaa gaactgcatt tcgagcttct ggtcgatttg
     1201 tgcggtgtcg attacagcac ttacaaaaac gaagtatggc agggcaaacg ctttgccgtc
     1261 gtcagtcagc tgctttctgt tcaaaacaat caacgcatcc gcgtacgcgt ctgggtttca
     1321 gacgacgact tccccgtagt cgaatccgta gtcgatattt acaacagcgc ggattggtac
     1381 gaacgcgaag ccttcgatat gtacggcatt atgttcaaca accacccgga cttgcgccgc
     1441 atcctgaccg attacggctt tgtcggacat ccgttccgca aagacttccc gatttccggc
     1501 tatgtggaaa tgcgttacga cgaagagcaa aaacgcgtga tttaccaacc tgttaccatt
     1561 gagccgcgcg aaatcacgcc gcgtatcgtc cgtgaggaga actacggtgg ccaataaatt
     1621 aagaaactac accatcaact tcggcccgca acaccctgcg gcgcacggcg tattgcgtat
     1681 gattttggag ttggagggcg aaaccatcgt ccgtgccgac ccgcatatcg gccttctgca
     1741 ccgaggcacc gaaaaactgg ctgaaaccaa aacctatctg caagccctgc cctatatgga
     1801 ccgtttggac tacgtttcca tgatggtcaa cgagcaggcg tattgcttgg cggtagaaaa
     1861 acttgccgga attgatgtac ctatccgcgc ccaatatatc cgcgtgatgt tcgccgaagt
     1921 aacgcgcatc ctcaatcact tgatgggcat cggttcgcac gccttcgaca tcggcgcgat
     1981 gaccgccatc ctctacgcct tccgcgatcg cgaagagctg atggacttgt acgaagccgt
     2041 gtccggcgcg cgtatgcacg cagcctattt ccgtcccggc ggcgtttacc gcgacctgcc
     2101 cgacttcatg cccaaatacg agggcagcaa attccgcaat gccaaagtat tgaagcagct
     2161 caacgaatcc cgcgaaggca ccatgctcga ctttatcgat gccttctgcg aacgcttccc
     2221 caaaaatatc gacacactcg aaaccctcct gaccgacaac cgtatttgga aacagcgtac
     2281 cgtcggcatc ggcgtcgtct cccccgaacg tgccatgcaa aaaggcttta ccggcgtgat
     2341 gttgcgcggt tcgggcgtgg aatgggacgt gcgtaagaca cagccttacg aagtgtacga
     2401 caaaatggat ttcgacatcc ctgtcggcgt gaacggcgac tgctacgacc gctacctctg
     2461 ccgtatggaa gaaatgcgtc aatccgtacg catcatcaaa caatgttccg agtggttgcg
     2521 tgtcaatccg ggtccggtca ttaccacaaa ccacaaattc gctccgccca aacgtaccga
     2581 aatgaaaaca ggtatggaag acctgattca ccatttcaaa ctctttaccg agggtatgca
     2641 cgttcccgag ggcgagacct acaccgctgt cgaacatccg aaaggcgagt tcggcgttta
     2701 catcatttca gacggcgcaa acaaacccta ccgcctgaaa atccgcgcac ccggcttcgc
     2761 ccatctgcaa ggcatggacg aaatggcaaa aggccacatg ctcgccgacg tcgttgccat
     2821 catcggtacg caggacatcg tattcgggga ggttgaccga taatgttatc cgcagagtcc
     2881 ttaaaacaaa tcgacacaga actggcgaaa tatcccgccg accaacgccg ttccgccatc
     2941 atgggtgcgt tgcgtatcgc ccaaaccgaa aaaggctggc tcgcccccga aaccatcgct
     3001 tttgttgccg actatatcgg catcacgcct gcacaagcct acgaagtcgc cactttctac
     3061 aatatgtacg accttgagcc tgtcggcaaa tacaaactga ccgtttgtac caacctgccc
     3121 tgcgccctgc gcggcggtat ggctaccggc gaatacctca aacaaaaact cggtatcggc
     3181 tacggcgaaa ctacccctga cggcaagttt acccttgtcg aaggcgaatg catgggcgca
     3241 tgcggcgacg ctcccgttat gctggtcaac aaccacagca tgtgcagctt tatgaccgaa
     3301 gaagcgattg agaagaaact ggcggagttg gagtaggtcg tctgaaacga cgatttaaac
     3361 gtaggtcgga tacttgtagc cgacagagtg ggtaaaaagg caaaatgtcg gatttaagaa
     3421 tccgccctac tgaaataccg aaatgccgtc attcccgcgc aggcgggaat ccaccggtaa
     3481 gattcggttt ctgaatttaa taagacattg cttaccattg aggatggatt cccgcctgcg
     3541 cgggaatgac gacagacaag caagtggtcg agatccaaca aaaacgatta aaggtcgtct
     3601 gaaaatatcg atttgataaa ctagatttta tttcagacga cgttacaagc cggtacacaa
     3661 agacatctta aggtcgtctg aaacagcggc cgcaaccgat acgaaaacaa acaggcacac
     3721 caaaaatggc tatttaccaa tcaggcgtga tttttgacca agtggatacc gccaatcccg
     3781 attgctggac attggacgaa tacgtcaaac gtggcggtta taccgccctg cgtaaaatcc
     3841 tgtccgaaaa catctcgcaa accgatgtga ttgacgaagt caaaacctcc ggcttgcgcg
     3901 gtcgtggcgg tgcgggcttc ccgaccggtt tgaaatggag ctttatgccc cgttctttcc
     3961 ccggcgaaaa gtacgtcgtt tgcaacaccg acgaaggcga gccgggtaca tttaaagacc
     4021 gcgacattat tatgttcaac ccccatgccc tgattgaagg catgattatc gccggttacg
     4081 cgatgggcgc gaaagccggt tacaactata tccacggcga aatttttgaa ggctaccaac
     4141 gctttgaggc cgctttggag caggcgcgtg ccgcaggctt tttgggtaaa aatattttgg
     4201 gttcggattt tgaattcgaa ctcttcgccc accacggcta cggtgcatac atctgcggcg
     4261 aagaaaccgc attgcttgaa tcgctggaag gcaaaaaagg ccagccgcgc tttaaaccgc
     4321 cattccctgc ttcgttcggc ctgtacggca aaccgactac catcaacaat accgaaactt
     4381 tctcctccgt ttcattcatt atccgtgatg gcggacaggc atttgccgat aaaggtattc
     4441 cgaatgcagg cggtaccaaa ttgttctgta tttccggcca tgtcgagcgt ccgggcaact
     4501 atgaagtgcc attgggtacg ccgtttgccg aaatcctgaa aatggcgggc ggtatgcgcg
     4561 gcggcaaaaa actcaaagcc gttattcccg gcggttcgtc tgcgcctgta ttgcctgccg
     4621 atatcatcat gcagaccaat atggactacg actcgatttc caaagccggc tcgatgctcg
     4681 gttccggcgc gattatcgtg atggacgaag acgtgtgcat ggtcaaagcc cttgagcgtc
     4741 tgagctactt ctactacgac gagtcttgcg gtcaatgtac gccttgtcgt gaaggtacgg
     4801 gctggctcta ccgcatcgtc caccgcatcg tagaaggcaa aggccgcatg gaagatttgg
     4861 atttgctgga ttctatcggt aaccaaatgg caggccgcac catctgcgcc ctcgccgatg
     4921 ccgccgtctt ccccgtacgc agctttacca agcatttccg tgatgagttt gtgcattaca
     4981 tcgaacacgg cgggccgatg aaagagcata agtggggagg gtggtaatgg tggaagctaa
     5041 aatttttatt ctatacggtg cagccaacaa aggtaagagt acgacactta atacgctttt
     5101 taatcagatt tgtcggaaat tttctaaatt tctagtcttt tttgaaagac atggaaacgg
     5161 cttagatttt gttgcagtat ttgatcatga aggtcagaga attggttttt attcatctgg
     5221 tgataatgaa tacgaggtta ggagaaattt atacaaactt tattcgcata attgtgattt
     5281 tatttttggc acgtcaagga cacggggtgg tagttgcgat gcagtaggat gttatgcaga
     5341 gttattgcat ggcgatgtaa atataattaa ttggtgtgaa aagtttgagc ctacagatga
     5401 agacaatgag cgtgctgtta aagagttatt taagtcattt aaaaatataa taaataagtt
     5461 atagttttag ttggttttat attggttaaa agcaaaatgc taaaaattta actttgccgt
     5521 cattcccgcg taggcgggaa tccatagtgg aatctaaaga aaccgatatt tgaaaagcag
     5581 ttgccgaaat tcaaaaaatg gattcccgcc tacgcgggaa tgacggcaag gtggcagtaa
     5641 acgttttaaa cagtattgat tgtcaatgaa actcaaaagg ccgtctgaaa cccatttttc
     5701 agacgacctc cataagatta tttatcaaat acccgtaact aggaacgaac catgttacaa
     5761 atcgaaatcg acggcaaaca agtatctgtg gagcagggcg cgacggtgat tgaagccgcg
     5821 cacaagctcg gtacttatat tccgcatttc tgttaccaca aaaaactttc catcgccgcc
     5881 aactgccgta tgtgtctggt gaacgtagaa aaagccccaa aacccctgcc tgcctgtgcc
     5941 acgccggtta cagacggcat gattgtgcgt acgcattcgg caaaagcccg agaggcgcag
     6001 gaaggcgtga tggagttcct gctcatcaac catccgcttg attgtccgac ctgcgaccaa
     6061 ggcggggaat gccagttgca ggatttggcg gtgggctacg gaaaaaccac cagccgctac
     6121 accgaagaaa aacgttccgt cgtcggcaaa gacatggggc ctttggtttc cgccgaggaa
     6181 atgagccgct gtatccactg cacccgctgc gttcgtttca ctgaagaaat cgccggtttg
     6241 caggaaattg cgatggtgaa tcgcggcgaa cactccgaaa tcatgccctt tatcggcaaa
     6301 acggtggaaa ccgagctgtc gggcaacgtc atcgatttgt gtcctgtcgg cgcattgacc
     6361 agcaaaccgt tccgcttcaa cgcgcgtact tgggaattga accgccgcaa atccgtttcc
     6421 gcccatgacg ctttgggcag caacctgatt atacaaacca aagaccatac cgtccgccgc
     6481 gtgttgccgc tggaaaacga agcgattaac gaatgttggc tgtctgaccg cgaccgtttt
     6541 gcctatgaag gcctgtatca cgaaagccgt ttgaaaaacc cgaaaatcaa acagggcggc
     6601 gagtggatgg acgtggattg gaaaaccgcg ttggaatatg tccgcagcgc gattgaatgt
     6661 atcgccaaag acggcaacca aaatcaagtc ggcgtttggg ccaatccgat gaatacggtt
     6721 gaagagctgt atttggccaa aaagcttgcc gacggcttgg gtgttaaaaa ctttgccacc
     6781 cgtctgcgcc aacaagacaa acgtctttca gacggcatta aaggtgcgca atggttggga
     6841 caaagcattg aatcgctggc ggacaacgat gccgtattgg tagtcggtgc gaacttgcgc
     6901 aaagaacagc cgctcctgac cgcccgcctg cgccgcgccg ccaaagaccg tatggccttg
     6961 agcgtattgg ccggcagcaa ggaagagttg ttgatgccgc ttctctctca agaagccgca
     7021 catcccgacg agtgggcagg ccgtctgaaa aacctgtctg ccaatgcgga acacgccgtt
     7081 accgccagcc tgaaaaatgc tgaaaaagca gcggtgattt tgggcgcgga agtgcaaaac
     7141 catcctgatt acgccgccat ttatgctgcc gcgcaagagc tggcagccgc gaccggcgca
     7201 gtgctgggta ttttgccgca agccgccaac agcgttggtg cggatgtctt gggcgtgaac
     7261 tcgggcgaga gcgttgccga aatggcaaac gcgccgaaac aggcggtctt gctactcaac
     7321 gtcgaaccgg aaatcgatac ggcggacggt gcgaaagccg tggccgcgtt gaaacaggcg
     7381 aaaagcgtga tggcgtttac accgtttgtc agcgaaacgc tgctggatgt gtgcgacgtg
     7441 ttgttgccga ttgcgccgtt taccgaaacc tcgggcagct tcatcaatat ggaaggccgt
     7501 ctgcaatcct tccacggcgt ggtacaaggc ttcggcgatt cgcgtccgat gtggaaagta
     7561 ttgcgcgtat tgggcaacct gtttgacctg caaggttttg aataccacga taccgctgcg
     7621 attctgaaag atgcgctgga tgtagaaagc ctgccgtcca aactggacaa ccgcaacaca
     7681 tggacagggg agggcgttca gacgacctca gaccgcctcg tccgtgtcgg cggcgtcggt
     7741 atttatcaca ctgattctat cgtgcgccgt tccgcaccgt tgcaagaaac cggccatgcc
     7801 gccgtgcccg ccgcgcgtgt caatccgaac actttggcac gcttgggcct gcaaaacgga
     7861 caaactgctg tcgccaaaca aaacggcgca agcgtatcgg ttgccgtcaa agccgatgcc
     7921 ggtttgcctg aaaacgtggt gcatctgccg ctgcataccg aaaatgccgc gctgggtgcg
     7981 ttgatggaca ctattgaact ggcgggagct tgattatgca ggaatggttc caaaacctct
     8041 ttgccgcaac gctcggtctg ggcgatttgg gtattaccgt aggtttggtg gtatccgtca
     8101 tcgtcaaaat cgtgattatc ctgattccgc tgattctgac cgttgcctac ctgacgtatt
     8161 tcgaacgtaa agtcatcggc tttatgcagc ttcgtgtcgg cccgaacgta accggcccgt
     8221 ggggtctgat tcagccgttt gccgacgtgt tcaaactctt gtttaaagag gtaacccgtc
     8281 cgaagctgtc aaacaaagcc ctgttctaca tcggcccgat tatgtcgctc gccccgtctt
     8341 tcgcggcgtg ggcagtgatt ccgttcaacg aagaatgggt gctgaccaac atcaatatcg
     8401 gccttttgta catcctgatg attacctcgc tgtcggttta cggcgtgatc atcgcgggct
     8461 gggcttccaa ctccaaatat tcgttcttgg gtgcaatgcg tgcttccgca caaagcattt
     8521 cctacgagat tgccatgagt gccgcgctgg tgtgtgtcgt gatggtgtcg ggcagcatga
     8581 acttctccga catcgttgcc gcgcaggcaa aaggtatcgc gggcggttcc gtattctcgt
     8641 ggaactggct gccgctgttc ccaatcttca tcgtctatct gatttccgcc gttgccgaaa
     8701 ccaaccgcgc accgtttgac gtggcagagg gcgagtccga aatcgttgcc ggacaccacg
     8761 ttgaatattc cggcttcgca ttcgcgctgt tcttccttgc cgaatacatt ttcatgattc
     8821 tgattgccgc gctgacatcg ctgatgtttc tcggcggctg gttgtctccg ttcccgcaaa
     8881 gctggggctt tatcggtacg ccttccgcat tctggatgtt tgtgaaaatg gcggcagtgt
     8941 tgtactggta cctgtggatc cgtgcaacct tcccgcgcta ccgttacgac caaatcatgc
     9001 gtttgggctg gaaagtgctg attccgatcg gcttcgccta catcgtgatt ttgggcgtgt
     9061 ggatgatttc accgctgaat ttgtggaaat aagtttcaga cggcatcttg aggccgtctg
     9121 aacaaagcga ttttgaatac ctaacgaaat ccctgttttg agggaacata atatggctaa
     9181 cttagtaaaa acctttctgc tcggcgagtt ggtaaaaggc atgggcgtaa cgctcaaaaa
     9241 cttttttgcc cgcaaagaca caatttattt ccccgaagag aaaacgccgc aatccgtgcg
     9301 tttccgtggc ctgcacgcgc agcggcggta tccgaacggc gaagagcgct gtatcgcgtg
     9361 taaattgtgc gaggcagttt gtccggcaat ggcgattaac attgaatcgg aagaacgcga
     9421 agacggcacc cgccgcacca agcgttacga tatcgacctg accaagtgca tcttctgcgg
     9481 tttctgcgaa gaggcctgcc cgaccgatgc gattgtggaa acgcatattt ttgaatacca
     9541 cggcgagaaa aaaggcgact tgcacatgac caagccgatc ctcttggcaa tcggcgacaa
     9601 atacgaagcc gaaatcgcca aacgcaaagc cgctgacgcg ccgtatcgtt aaggagcaga
     9661 cgaatgactt tttccgcgat tctgttctat atccttgccg ccatcgtcct atacggcgcg
     9721 ctgcgtaccg ttacagcgaa aaaccctgtc cacgccgctt tgcatctggt gttgaccttc
     9781 tgcgtgagcg cgatgctttg gatgctgatg caggctgagt ttttgggcgt gacgctggtg
     9841 gtggtttacg tcggcgccgt gatggtattg ttcctgttcg tcgtgatgat gttgaacatc
     9901 gacattgaag aaatgcgtgc cggtttctgg cggcacgcgc ctgttgccgg tgtggtcggc
     9961 acattgttgg cagttgccct gattctgatt ctggtcaatc cgaaaaccga ccttgccgca
    10021 tttgggctga tgaaagacat tcccgccgat tacaacaata tccgcgattt gggcagccgt
    10081 atttataccg attatctgct gccgtttgaa ttggcggcgg tattgctgct gttgggtatg
    10141 gtggccgcga ttgcgctggt tcaccgtaaa acggttaatc cgaaacgtat ggatcctgcc
    10201 gaccaagtta aagtacgcgc cgaccaaggc cgtatgcgct tggtgaaaat ggaagccgtg
    10261 aaaccgcaaa ccgaatctgc cgaagaaagc gaagtttcag acgacctcaa gccgaaagag
    10321 gagggcaaag catgattacc ttgacgcatt atctggtatt gggtgcgctc ctgttcggta
    10381 tcagcgcgat gggtatcttc atgaaccgca aaaacgtgct ggtattgttg atgtccattg
    10441 agctgatgct tttggcggtg aacttcaact ttatcgcctt ttcgcaacat ttgggcgata
    10501 ctgccggaca aattttcgta tttttcgtac tgaccgttgc tgctgccgaa tctgccatcg
    10561 gtttggcaat tatggtgctg gtgtaccgca accgacaaac gattaacgtt gccgatttgg
    10621 acgagttgaa agggtaaagg taggttgggt cgagacctga caagacaccg atgccgtctg
    10681 aaaacccgat aggaaaaacg atgaaatcca tagacgaaca aagcctgcat aatgcccgcc
    10741 gcctgtttga aagcggcgac atcgaccgta tcgaagtcgg taccaccgcg ggcctgcaac
    10801 agattcaccg ttacctgttc ggcggcttat atgattttgc gggtcaaatc agggaagaca
    10861 acatttccaa aggcggtttt cgttttgcca acgccatgta tttaaaagag gctttggtta
    10921 aaatcgagca gatgcccgag cggacttttg aagaaatcat cgccaaatat gttgaaatga
    10981 acattgccca tccgtttttg gagggtaatg gcagaagtac ccgcatctgg ctggatttgg
    11041 tgctgaaaaa aaacctgaaa aaagtcgtga actggcaaaa tgtaagtaaa accctgtatt
    11101 tgcaggcaat ggaacgcagc cccgtcaacg atttagaact gcgctttctg ttaaaggaca
    11161 acctgactga cgatgtggac aaccgtgaaa tcatctttaa aggtatcgag cagtcgtatt
    11221 attacgaagg gtatgaaaaa ggctgagggt cgtctgaaaa gcgatttcag actgtttcag
    11281 acgacctgat tcggtaggtg atcagacggg agcggatgag aaaagaaatt ctgggtaaga
    11341 ataatccggt ctgaaatatt ggaagaagaa tgatggataa aaatcagtta gaacaagaat
    11401 ttcataaagc catgttaaat atttatcagg aggctttgaa tttgccgcaa ccttacaagg
    11461 cgacacgatt tttacaaatt gtaaatgaat ttggtggtaa agaggcggcg gataaattat
    11521 taagtacggg ggaaaagaag actcagaccg gttttacaga gctgattttg agtggtggcg
    11581 gagtccacgc cttgaaatac agtatggaat atctggtgtt acaaaagccg tggtgtgatt
    11641 tatttactga agagcaatta gctgtggcac gcaaacgatt ggagcgtgtt ggatttgttt
    11701 ctccgaagta attttgtacg aaacaaacat agatttttaa atcaatcgga ttcaatcaaa
    11761 tgaacgacat gactttatat ctcatcattg cccttgtgcc tttggcaggc tcgctgatcg
    11821 cgggtttgtt cggcaacaaa atcggacgtg ccggtgcgca tacggttacg atactcggcg
    11881 tggcggtgtc cgccgtgctg tcggcttatg tgttgtgggg ctttattgac ggcagccgcg
    11941 ccaagtttga cgaaaacgtc tatacctggc tgacaatggg cggcttggat ttctccgtcg
    12001 gctttttggt cgatacgatg acggcgatga tgatggtcgt ggtcaccggc gtatcgctga
    12061 tggtacatat ctataccatc ggttatatgc acgatgaaaa aatcggctac caacgcttct
    12121 tcagctatat ttctttgttt actttcagca tgttgatgct gattatgagc aacaacttca
    12181 tccagctctt cttcggttgg gaagcggtgg gcttggtgtc gtatctcttg atcggtttct
    12241 atttcaaacg tccgagcgcg acatttgcca acctgaaagc ctttttgatc aaccgtgtcg
    12301 gcgacttcgg ctttttgctc ggtatcggct tggtgcttgc ctatttcggc ggcagcctgc
    12361 gctatcaaga tgtattcgct tatctgccta atgttcagac ggccaccatt caattgttcc
    12421 ccagtgtgga atggtctttg attactgtaa cctgtttgct cctgtttgtc ggtgcgatgg
    12481 gtaaatcggc acaattcccg ctgcacgtct ggctgcctga ttcgatggaa ggcccgaccc
    12541 cgatttctgc attgattcac gccgcaacca tggttaccgc cggtctgttc atggtatcgc
    12601 gtatgtcgcc gatttatgag atgagcagca ctgcgctgtc tgtcatcatg gtaatcggtg
    12661 cgattaccgc cctgtttatg ggtttcttgg gcgtgattca aaacgacatc aagcgcgtgg
    12721 ttgcgtattc caccctgtcg caactgggct atatgactgt ggctctgggc gcgtctgcct
    12781 attccgtggc gatgttccat gtgatgaccc acgctttctt taaagccttg ttgttcttgg
    12841 ccgcaggtag cgcgattatc ggtatgcatc acgaccaaga catgcgccac atgggcaacc
    12901 tgaaaaaata catgccgatt acttggttga ccatgttgat cggtaacttg tcgctgattg
    12961 gtacgccgtt cttctccggc ttttactcca aagattcgat tatcgaagcg gcgaaataca
    13021 gcacccttcc cggcagcggc tttgcctatt ttgccgtcct tgccagcgtg ttcgttaccg
    13081 cgttttacgc gttccgccaa tactttatgg tgttccacgg cgaagagaaa tggcgcagcc
    13141 tgcccgaaca ccattcagac ggacatggcg aagaacatca cggcttgggc aaaaacgaca
    13201 atccgcacga aagcccgctg ttcgttaccc tgcctttgat tttgcttgcc attccgtccg
    13261 tcatcatcgg ctatgttgcc atcgggccta tgctttacgg cgatttcttc aaagacgtga
    13321 ttttcgtcaa taccgacgcg catccgacca tgcacatcat gaaggaagag ttccacggcg
    13381 cattggcaat ggtgtcgcac agcctgcatt ctcctgtact ctacctcgct atcgcaggtg
    13441 tattgagcgc atggcttttg tacgtcaaac tgccgcacct gcctgcgaaa attgcacagg
    13501 cgttccgtcc ggtttacgtt ttgtttgaaa acaaatacta cctcgacgcc ctgtatttca
    13561 acgtcttcgc taaaggcacg cgcgcactgg gtaccttctt ctggaaagtc ggcgataccg
    13621 ccattatcga taacggcatc gtcaacggct ctgccaaact ggtcggcgcg attgccgcgc
    13681 aagtgcgtaa agcccaaacc ggctttatct acacctacgc cgccgctatg gtgttcggcg
    13741 tattggtact gctcggcatg accttctggg gattgttcag ataaggatga ggcttcagac
    13801 ggtctcttaa aacgtcgtct gacaaaccaa cccgtacaac gatattttta ttttaaccac
    13861 aggttaacca ctatgttttc caactaccta ctcagcttgg caatatggat acccatcgcc
    13921 gcaggtgtgc tggttttggc aacggggtcg gacagccgtg cgccgctggc gcgtgtgctt
    13981 gccttcatgg gtgcgcttgc cggtttcttg gtaacgctgc ccctgtttac cggtttcgac
    14041 cgtttgagcg gcggctatca atttaccgag ttccacgagt ggattccgct gctgaaaatc
    14101 aactatgcat tgggcgtgga cggtatttca gtgctcttta tcatcttgaa tgcgtttatt
    14161 acgctgttgg tggtattggc cggttgggaa gttattcaga aacgtccggc gcagtatatg
    14221 gcggcattcc tgatgatgtc gggtttgatt aacggcgcgt ttgccgcaca ggatgcgatt
    14281 ctgttttatg tgttcttcga gggtatgctg attccgctgt acctgattat cggtgtatgg
    14341 ggtggcccgc gccgcgttta tgcgtcggtc aagctgttcc tctatacgct gatgggttcg
    14401 cttttgatgc tggttgccat ggtttacctg tactatcaga caggcagctt ctctattgtc
    14461 gatttccaaa acatcaagca gattccattg ggcgtacaac agcttttgtt tgtggcattc
    14521 ttcctgtcat ttgccgtaaa agtgccgatg ttccctgtgc acacttggtt gccggatgcc
    14581 cacgttgaag cgccgaccgg cggttcgatg gtgttggcgg caattacgct gaaactgggt
    14641 gcgtatggtt tcttgcgttt tatcctgccg attatgccgg atgcggcacg ctattttgcc
    14701 cctgtgatca tcgtattgag cctgattgcc gtgatttata tcggtatggt ggctttggtg
    14761 caaaccgata tgaaaaaact ggtggcgtat tcgtctatca gccatatggg ttttgtaacg
    14821 cttgggatgt ttttgtttgt tgacgggcag ttggacgact gggcgttgaa aggcgcaatc
    14881 attcaaatga tttcgcacgg tttcgtgtcg gcggcgatgt ttatgtgtat cggcgtgatg
    14941 tacgaccgcc tgcatacccg caatattgct gactatggcg gcgtggtcaa tgtgatgcct
    15001 aagtttgcgg cgtttatgat gttgttcggt atggccaatg ccggtctgcc tgcgacttcc
    15061 ggcttcgtgg gcgagtttat ggtgattatg ggcgcggtta aagtgaattt ctgggtaggc
    15121 gcgttggcgg ctatgacgct gatttacggc gcgtcttata ccctgtggat gtacaagcgc
    15181 gtgatttacg gcgcgatcca caatccgcac gttgccgaaa tgaaagacat caactgtcgc
    15241 gagtttgcga ttctggcggt tttggcggtt gcggtattgg gtatgggctt gtatccgaac
    15301 gcgtttatcg aagtggtgca tcaggcggca aacgatttga ttgcccatgt ggcacaaagc
    15361 aagatttgag gtgtgtaaat gaactggtct gatttgaatt taatgcccgc actgcccgaa
    15421 atcgcgctgc tgtcgctgct ggtgttattg ttgctggcag acttgtgggt cagtgatgac
    15481 aaacgccgtt ggacgcatta cggcgcgttg gcaacggtgg cggttacggc tgtggtgcag
    15541 cttgccgttt gggaacaggg cagcacgtct tcgttcaacg gcatgtatat tgcagacggt
    15601 atgtcgcgtt tggcaaaaat ggttttatat gccttgacgt ttgccctgtt tgtttatgcc
    15661 aagccctaca accaagtgcg cggtattttc aaaggcgagt tttacaccct gtcgctgttt
    15721 gccctcttgg gcatgagcgt gatggtgagc acggggcatt ttttaactgc ctatatcggt
    15781 ttggaactct tgtcgcttgc cctttacgcc ctgattgccc tgcgccgcga ttccggcttt
    15841 gccgccgaag ccgccttgaa atattttgtt ttgggcgcgc tggcatccgg cctgctgctc
    15901 tacggtattt ctatggttta cggcgcaacc ggttcgctgg aatttgccgg cgtgctcgcc
    15961 tcttccttca atgaagaagc caacgaatgg ctgttgaaac tgggtttggt gtttatcgtc
    16021 gtcgccgtcg cgttcaaact cggtgcggtg ccgttccata tgtgggtgcc cgacgtgtat
    16081 cacggcgcgc ccacttctgt taccgccctg gtcggcactg ccccgaaagt cgccgccgtc
    16141 gttttcgctt tccgcatcct cgttaccggg ctgggaaccg tgcatcatga ctggtctctg
    16201 atgtttgccc tgcttgccgc cgcctcgctg ctggtcggca accttgccgc catcatgcag
    16261 accaatatca aacgtatgct cgcctattcc accgtatcgc atatggggtt tatcctgctg
    16321 gcgtttatgg cgggcgcggt cggctttgcg gcgggtctct attacgccat tacctacgcg
    16381 ctgatggcgg cggcagggtt cggcgtgttg atggtgttgt cggatgggga caacgagtgc
    16441 gaaaacatca gcgatttggc agggctgaac caacaccgcg tatggcttgc ctttttgatg
    16501 ttactggtta tgttctctat ggcgggcatt ccgccgctga tgggttttta cgccaaattt
    16561 ggcgtgatta tggcgctctt gaaacaaggc catgtttggt tgtccgtatt tgccgtcgtg
    16621 atgtcgctga ttggtgcgtt ctactacctg cgcgtggtca aagtcatgta ttttgacgaa
    16681 tccggccgcg cccgtcccac cgtcggcggc aacaatgccg caaaattcct tttgagcgtc
    16741 aacgcgctgc tgttggtgct gtggggcatt atgccgcaaa ccgttatcga ctggtgcgcc
    16801 aaggcgttgg aaaacacgct gtaagccgcc gcaacggcag ccgtgtcaga ggctgccgtt
    16861 tttgttaaga tatgccgtcc cgcaacgcag ttcagacggc atcgccgccg acaatgccca
    16921 aacagaaagc ccgccatgac cgcatccatg tacatccttt tgctgcttgc cttgattttt
    16981 gccaacgccc ccttcctcac gaccaggctg ttcggcatcg taccgctcaa gcgcaaacat
    17041 ttcgggcacc acttgatcga gctggcggca ggtttcgcgc tgactgccgt tcttgcctac
    17101 atcctcgaat cccgtgcggg agcggtacac gatcagggtt gggagtttta cgccaccgtc
    17161 gtctgcctgt acctgatttt tgcgtttccc tgtttcgtgt ggcggtattt ttggcacacg
    17221 cgcaacaggg aataggcagg cataggaatg ccgtctgaaa ccctttcaga cggcatttgt
    17281 ttcattcaag tgcaggccgg catcgctgtg ccggcacgtt tcagccggcg atatacgccg
    17341 gttttaatat ttgcgggcga ctgcaaattc tgccaactgc cgcaggcgca gggctttgtc
    17401 gccgaagggt tcgagcagcg cgaccgcttc ggcaaccagt ttgtgtgcgt atgagcgcgc
    17461 cgcttccaag cccatcagtt tcacataagt cggcttgtcg ttgtctgcgt ctttgcccgc
    17521 cgttttgcct aaagtcgccg tgtccgcttc acaatccaac acatcgtcaa tgacttggaa
    17581 cgccagcccc agttttgccg cataatcgtc caataccgcc agactgtctt cagacagatt
    17641 cgggcaggac atcgccccca ataaaaccgc cgcacggatt agcgcacccg ttttcaggct
    17701 gtgcatctgt tccaaatcgg cttgaaccat ttgtttgccg acattcgcca aatcgattgc
    17761 ctgaccgccc gccatgcccg cgctgccgcc cgctttcgcc aacaccgaca acattgccaa
    17821 ctggcgtgct gcgggcagtt ctgtcggacg gcttaacacg tcgaaggctt gggtttgcaa
    17881 agcgtcgccg accagtagcg cggtggcttc gtcgtattgt atatggcaag tcggtttgcc
    17941 gcgccgcagg ctgtcgttgt ccatcgccgg catatcgtcg tgaaccaaag aatagacgtg
    18001 gatcatttcg attgccgcca ttgcctgttc tactgcttca tgcacggctt cgcctaattc
    18061 cgaagctgcc agaaccagca tcggccgcag acgcttaccg ccgtccaaag ccgcataacg
    18121 catcgcttcg tgcagcgtgt gcgggatttc gttttcagac ggcaaaaagc gttccagcag
    18181 cagctctgtc tgtgcctgcg ccctctgttg ccacgctttc aaatcattcg tcggattcaa
    18241 ggttcaactc cttcagcccg tccgcatcca aaacctgtaa tttctgttcg acttgtgcca
    18301 gcttggtttg gcagtacctg accagctcgt tgccttcctg ataggcggca agcgcgtctt
    18361 ccaagggcat ttcgccctgc atagactgcg tcagcgattc aaggcgcgac aaggcttctt
    18421 caaacgattt cggggcgttt ttcttcatcg tgtttccttt tcggttgaaa ccccgccact
    18481 tggacatctg tccttcgggg cggtagaatc agactttatt tgggaggggt gtaagccctt
    18541 ccaaatcagg acgacacata gggcggtgct ttaagtgtcg tcctgcgtgt tggaacatag
    18601 tttcggatgt tccggtaaaa agcggattgt agcatttttg aaaaacggat gccgtctgaa
    18661 acccgaatcc ggcttcagac ggcattgttt tgtcctgcaa acggcaaggc gttacccggg
    18721 cagttcgtcg gtgatgccct gcaaaaaggc gaggcgttcg gggcttgccg ccccggtttc
    18781 ggcggcggct ttgaaggcgc agccgggttc ggcgcggtgg gtgcagttgt ggaagcggca
    18841 ttgcccgaca aggtggcgga aatcggggaa atagcgcggc aaatcggcgg cttggaggtg
    18901 gtgtaaacca aattcttgca aacccgggga gtcgatgagt tgggtttcgc cgttcaaatc
    18961 ataaagccgg gcgtgggtgg tggtgtgttt tcccgagtcg agtgcggcgg aaatgtcgcc
    19021 ggtgcgggcg gtttggctgc ccaaaagggc gttggtcagg gtggatttgc ccataccgct
    19081 ctgcccgagc aggatgttgc tgtgcccttg cagggcgggg cgcaggctgc cggcgttttc
    19141 cagtgcgcgg gtttcgatga cgggataacc cagcgtttcg tagaatttga gtttttcgcg
    19201 ccaaagggcg gtttcgggca ggtcggcttt gttcaggacg atgacggcgc ggatgccggc
    19261 ggcttcggcg gcaagcaggg cgcgctgtag cagccgcacg ctcggactcg ggacggcggc
    19321 ggttacgatg aggagttggg taacgttggc ggcaatgagt ttggttttcc acgcgtcttg
    19381 gcggtagagc aggctttggc gcggtaaaaa atcttcaatc acaacttgtt cggcgttgac
    19441 ggggctgatg cggacacggt cgccgcaggc gaaatcgacg cgttttttgc gcgtgctggc
    19501 ttcgtaggtt gtgccgtcgg gcgtgcgcac gatgtagcgg cggccgtagc tggcggtaat
    19561 ttgggcggtg tcgttcatgg tttctttggg gttgggtgtg gaaatgccgt ctgaaaacgg
    19621 gtgttcggac ggcatcggtt cagtcgtgct gccactcgac gtgttcgttg aggaagccgc
    19681 cgctctggtg cgcccagagt ttggcgtaaa gcccgcgttt ttcgaggagt tcggcgtgcg
    19741 tgccttcttc gatgatgcgg cctttgtcga ggacgacgag cctgtccatt gcggcgatgg
    19801 tggagaggcg gtgggcgatg gcgatgacgg ttttgccgtc catcattttg tcgaggcttt
    19861 cttggatggc ggcttcgact tcggaatcga gcgcgctggt ggcttcgtcc aaaagaagaa
    19921 tcggtgcgtc tttgagcatc acgcgggcga tggcgatgcg ctggcgttga ccgccggaga
    19981 gtttcacgcc gcgttcgccg acgtgtgcgt cgtagccgcg ccgccctttg gcatcggaaa
    20041 ggtcggggat gaagccggcg gcttcggcgc gttcggcggc agaaaccatt tcggcatcgg
    20101 tcgcgtcggg gcggccgtaa ataatgttgt cgcgcacgga acggtgcagc agcgaggtat
    20161 cttgcgtgac caaaccgatt tgggcgcgta aagattcttg ggtgatgccg cttatgtcct
    20221 gcccgtcgat cgaaaccgtg ccgctttgcg gttcgtagaa gcgcaaaagc aggttgacga
    20281 tggtggattt gcccgcgccg ctgcgtccga tcaagccgac cttttcgccg ggtcggatgg
    20341 tgaggttgaa gccgttgagc agcggtttgc cggcttcgta gcagaaatcg atgtgttcaa
    20401 atttgattgc gccttgcgac actttcaacg gcagggcgtt cggcttgtcg aggatggtgt
    20461 gcggtttgga cagggttgcc atgccgtcgc cgacggtgcc gatgttttca aacagctgcg
    20521 cggattccca cataatgtat tgcgacaaac cgttgacgcg caacgccatg gcggtggctg
    20581 tagcaaccgc gcccacgccg acctgcccgt tgtgccagag ccagatgccc agtgcggcgg
    20641 tggagagggt cagggaggtg ttgacgatga agctgcacga atgcagcagc gtcgccagcc
    20701 gcatttgggc gcgcaccgta accataaatt cttccatcga ctgcttggca taggcggctt
    20761 cacgcgcgcc gtgggagaag agtttgacgg tggcgatatt ggaataggca tcggtaatgc
    20821 ggccggtcat cagcgagcgg gcatccgcct gccatgcggc ggtttgcccc aatttgggaa
    20881 tcagcaggcg catcaccgaa gcgaaaccga caatccaacc gataaagggc agcagcagcc
    20941 atgagtcgag cgaggcgaga atcacgccgg aggtaatgaa atacaccgac acataaacga
    21001 ccatatcggc aaccgtcatc accgcgtcgc gcaacgccag cgcggtctgc atgactttgg
    21061 cggacacgcg tccggcaaat tcgtcctgat aaaaaccgag gctttggttc agcatcaggc
    21121 ggtggaagtt ccagcgcagg cgcataggga acacgccctg aagggtttgc aggcgcacgt
    21181 tggacgcggc aaacgcccac gcaaccgaaa ataccatcat cgccgccatt gccgccagtt
    21241 cccaaccttt ttcggcaaac agttcggcgg gcgcgtattt gccgagccac tccacgattt
    21301 tgcccataaa ttgaaaaacc agggcttcca taatgccgat gccggcggtc agcgcagcca
    21361 gggcggctat ccatttccgc acgccggcca tgctgctcca gacaaaccgc cacaagcctt
    21421 tttctggcgt tttcggggcg gcttcgggat aagggtcgat tcgggactcg aaccaggaaa
    21481 atattttgtt caacattgtt ttcgatttcg gtaaaacagt ttcagacggc atcaaacaca
    21541 atgccgtctg aaaggaagga caataacgcc attttacggg aaaagccgtc gggaagacag
    21601 cgtgaggcgg aaacgcaggg tttcgtcagg gcaaacgccg cgccgccttc agacggcatt
    21661 atttcagcag gtttttcaaa gcaaggcgca cgccttcgcc cacgtccgtc ccctccggaa
    21721 cgcctttgac cgccgctttt gcttcgcgtt cgctgtaacc cagcgcaagc agcgtgctga
    21781 cgatgtcttc cgtttcgtcg gcggcgggtg cggcggcaaa cagcccgtcc gttaccgtat
    21841 gcgcgaccag cttgccgcgc agttccaaga ccatacgttc ggcggttttt ttgccgattc
    21901 ccggcgcgga agacaggcgt ttgacatctt cttcggcaac cgcccgcgcc agctcgtctg
    21961 ccgtcatcgc tgacaaaatg cccaaagccg ttttcgcgcc gatgccgccg accttaatca
    22021 gttggcggaa ggtcttgcgt tcttccgcag tggcaaaacc aaataaaaga tgtgcgtctt
    22081 cccgaatgat aagctgggta aacagttgta cgctttcacc cacgggcggc aggttgtaga
    22141 aggtctgcat cgatacgtcg gcctcatagc cgacaccgtt gacatcgatg acgatttgcg
    22201 gagggttttt ttcaaccagt ttgccggtca gtctgctgat catgtgtgcc gaatcctgaa
    22261 gtgtcgggtg caaaatgccg tctgaaaccg gttcgggctt cagacggcac ggattgtatc
    22321 aaattcagtc gtcgcggcgg gaggaaatca cgcggccggt acgggcatcg acaacgactt
    22381 tgtattcctg tccgtttttg acgatttcga catcatagtg cggacggccg ttgtcgtgtt
    22441 cgagatcgat gtcggtgatt ttgccgccga cacgcgccaa cgctgctttt tcggcttggg
    22501 cgcggctgat gattttgtct tgtttgttgt gttggtgtgc ggcgtgtccg tggtcgtcat
    22561 cgccgtgtcc gtcgtggtgg gcgagcgcgg gggcggaaat gctcagcagt gcggttgcgg
    22621 cggcggtcaa gagaaggcgt ttgaagttca tgttttgctc ctgcgaagta tctggtggtg
    22681 tttgaaagac gtaaaggcgg gacatcaacc ggcggtcaat accgtctgaa ccataccgcg
    22741 cgcctgagct tcggcctcgg cggcgcgttc ctgcgaggca aacggaccca ttttgacgac
    22801 gtattcgtaa cggcgttttt caatggcgag gttcgggctt gatgtcgaag cggcgaagtt
    22861 ttgggcggct tggttcagat aggcttgtgc ttcgtgttcc gtaccgaaag atttcaagtc
    22921 gataaagatg tctttgtttt cggcaaccgg tgcggatttg cccgggacga tttgttcgat
    22981 tttgacgtgc gccgtccctt ggctgacaaa gcccaatttt tgcgcggcgg ctttggatac
    23041 gtcgatgatg cggttgccgt ggaaggggcc gcggtcgttg acgcggacga tgacgctttt
    23101 gccgtttttg gtattggtta cgcgcacata gctggggatg ggcagggttt tgtgggcggc
    23161 ggtaaaggcg ttcatatcgt atcgttctcc gccggaagtt ttgcgcccgt gaaacctgcc
    23221 gccgtaccac gaggcgttgc cggtttgcgt gaattcggcg acttggtttt tcggcgtgta
    23281 gcgttttccg gcgactttgt agctgcggtt ggcggaggcg tgcagttttt ctgccttgac
    23341 cactgcgtcg gcggatgccg tctgaaggga gtgtgtgccg aatgcggcgg tgagaaggaa
    23401 aagggttttt cgggttaaag tcaaaacgtg ttccgttctt gagttgaaga cgaatgggca
    23461 tcatgcccgc cggatacgtt ccgaaccgcc gtacagtgcg gacggcggtt cggaatgtgt
    23521 ccggataggt tttcagacgg catgaacttg cgttcaaacg ccgcctgcgt aaccgtgttg
    23581 ccgccacgct tcaaagagaa tcacggcaac ggtattggaa aggttcatac tccggctgcc
    23641 gggctgcatg ggcaggcgga ttttttgcgc ggcgggcagg ctgtcgagga tgtcggcagg
    23701 cagtccgcgc gtttccggcc cgaacagtaa aacgtcgcct ttttgaaacg cggtttcatc
    23761 ggggcgcgcc gtgcctttgg tggtcagggc gaaaatgcgc ctgcctgcga gtgccttgag
    23821 gcagtcgtcg aagttttcgt acaccgtcag gctggcgaat tcgtggtagt cgagcccggc
    23881 gcgtttcatt ttggcggaat ccaatgggaa gccgagcggt ttgacaaggt gcaaatccgc
    23941 gccggtattg gcgcacaggc ggatgatgtt gcccgtgttc ggcgggattt ccggctggta
    24001 taaaacgatg gtaaacataa atatcaatca cttataggcg cgtaaccttg ccacaaggcg
    24061 gatggggtgt caaaaaattt agttattttt tcattggcgt gcgtgccagc gtccagcagc
    24121 agatgcggtt cgcgcccgat tttttcagcg tctttgccaa ttcgtccagc gtcgcgccgg
    24181 tggtaaagac atcgtcgatt aacagaatat tacagttttc cggtatcggt gtgcggattt
    24241 caaaggcgtt tttgatgttt cgccgccgtt cgctgccttt gagcgtgctt tgcggcgggc
    24301 ggtggtgtcg gaatacggtg tgtcggggca gtatctgcca gccgtagcgt tgtgccaaca
    24361 acccgacgat gctttcactt tggttgaacc cgcgttgcag cagccgctcc ctgcttagcg
    24421 gtacgggcag gacgaaatcg aaacattcgt ctgcaagccg gtcgggcgga ttctgcatca
    24481 tcaggtctgc cagcggctgc accatgctca aatcagccaa gtgcttcagc gcgtgtatca
    24541 tattgctgac gggcggttcg taatgcagcg aagcccacat ccggtcgaat gcgggcggtt
    24601 ttttctgaca gccgccgcac accgcgccgc cttggatgtg cctgaaacac agggggcagc
    24661 tgtttgccgc gtcggtgcgg tatgccgcca aatcgtcgcg gcagccggcg cagatgccgt
    24721 ctgaaacgcc ggacgaaccg tggcataata cgcaacgcct gatagtgggc gcgtctgcga
    24781 tgcgccgcca acgagagaga aaatccatgc ctgatgccgt caaaaaagtt tacctgatac
    24841 acggttgggg ggcgaaccgc cacatgttcg acgatttgat gccgcgcctg cctgcaacgt
    24901 ggccggtgtc cgccgtcgat ttgcccggac acggcgacgc gcccttcgcg caacccttcg
    24961 atattgaggc agccgccgac gctgttgccg cacaaatcga tacgcccgcc gacattctcg
    25021 gctggtcgct cggcggattg gtcgcgctgt atctggcggc gcgccatccc gacaaagtcc
    25081 gttcgctctg cctgacggcg agtttcgcac ggctgacggc tgccgaagat tatcccgaag
    25141 ggcttgccgc gcctgcactg ggcaaaatgg tcggcgcgtt ccgttcggat tatgccaaac
    25201 atatcaaaca gtttctacaa ctccagcttc tgcacacgcc tgatgcggac ggaatcatag
    25261 gcagaatcct gcccgatttg gcacggtgcg gcacgccctc cgccttacag gaagctttgg
    25321 acgcggcgga aagggcggat gcgcggcatt tgttggacaa gatagatgtt ccggtactgc
    25381 tggtgttcgg cggcaaagac gcgattacgc cgccgcgtat gggcgagtat ctgcaccggc
    25441 atttgaaagg cagcaggctg gttgtgatgg aaaaggcggc acacgcgccg tttttgagcc
    25501 atgcggaagc gtttgccgcg ctgtaccgcg actttgttga aggggtttga catgaatccg
    25561 caggacaaat gctggcaggt tcaccgccat ctcgccgaat atgccgacca acgcctgaca
    25621 ctcgtccgca acgcgcccaa gtatatcctg cttgccggtg cggatgcgga catcagccgc
    25681 agcctgctgg cgaaacgcta tccgcaggcg gtatttgaag aatacgattc ccgtgcggac
    25741 tttttggcgg ctgccgctgc cgcccgcaaa ggcggttttt ggcaaaggtt tacgggtaag
    25801 ggcgtggtgc aacactgcca atccccgatc gcgccgctgc ccgaagcgtg tgctgatatg
    25861 ttgtggtcga atctcggact gttggcggcg gaacaaatcc ttcctgtgct gcacaactgg
    25921 gcgtgcgcct tgaagacgga cgggctgctg ttttttacct gcttcgggcg cgacactttt
    25981 accgaactga aatgccgtct gaaagaaaac ggcattgaaa gccgcagcgt gatgtttccc
    26041 gatatgcacg acttgggcga tatgcttgct gaaaacggct tttacgaccc cgttaccgat
    26101 acggcgaagc tggtgttgga ttacaaaaag gcggaaacgt tttgggcgga tatggacacg
    26161 ctgggcgttt ggcgggcgat ggcgtggaac gatgaaaacg ccgcgcgttc gtgtgtcggg
    26221 acaatatttg agcgggaagg cggtttgggc attacgctgg aaacggtgta cggacacgcc
    26281 gtgaaaaaac tgatgctgcc gcaaggggag aacgtggtgc agttttttcc gaagagatga
    26341 tgtgcagatg ccgtctgaag ccgtttccag gtttcagacg gcatttgtct gtgaaaaccg
    26401 acagaaataa aggaaatgcc gatgtatagt g
//
LOCUS       DAWGKF010000009        26359 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.009, whole genome shotgun sequence.
ACCESSION   DAWGKF010000009 DAWGKF010000000
VERSION     DAWGKF010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 26359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26359
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.009"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(418..493)
                     /locus_tag="WHR07_000259"
     tRNA            complement(418..493)
                     /locus_tag="WHR07_000259"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(458..460),aa:Asn,seq:gtt)
     gene            complement(586..945)
                     /locus_tag="WHR07_000260"
     CDS             complement(586..945)
                     /locus_tag="WHR07_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HEZ2129531.1"
                     /translation="MQQLLISILEDLNNTSTDIIASAVISTDGLPMATMLPSHLNSDR
                     VGAISATLLALGSRSVQELACGELEQVMIKGKSGYILLSQAGKDAVLVLVAKETGRLG
                     LILLDAKRAARHIAEAI"
     gene            complement(968..1612)
                     /locus_tag="WHR07_000261"
     CDS             complement(968..1612)
                     /locus_tag="WHR07_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M23"
                     /protein_id="HEZ2129532.1"
                     /translation="MESTLSLQANLYPRLTPAGAFYAVSSDAPSAGKTLLHSLLKADA
                     DEMVSSEKLLTWADTADIDTALNLLYRLQKLEFLYGDENGHSDGINLSDEQLPLLMEQ
                     LSGSGKALLVDRNGLYLANANFHHEAAEELGLLAAEVAQMEKKYRLLIKNNLYINNNA
                     WGVCDPSGQSELTFFPLYIGSTKFILVIGGIPDLGKEAFVTLVRILYRRYSNRV"
     gene            complement(1614..2150)
                     /locus_tag="WHR07_000262"
     CDS             complement(1614..2150)
                     /locus_tag="WHR07_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP/GTP-binding protein"
                     /protein_id="HEZ2129533.1"
                     /translation="MRENKIIFTGPVGVGKTTAIAAISDEALVQTDASASDMTLDRKR
                     NTTVAMDYGAISLDEDTKVHLYGTPGQERFNFMWEILSQGSMGLVLLLDNARTNPLKD
                     LEFFLHSFRGLLEKAPVVVGITKMDIRSQPGIDVYHKYLAKHNLNVPVFEIDARKEDD
                     VKQLVSAMLFSIDPGLEV"
     gene            complement(2162..3259)
                     /locus_tag="WHR07_000263"
     CDS             complement(2162..3259)
                     /locus_tag="WHR07_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEZ2129534.1"
                     /translation="MEVQLPKIKTVRVMLAGMTAQQESVFKMAFKMHNTTRYETVSPS
                     DGSAVPDLVLADTDAEGGFELWKELAERYKDIPVAVCSEKVPDSEVPYLPKPIRFETL
                     FPMLRKLLQGENVYGKSFIAPADRSAKNNGNVQRTVTIRQFNPNKGLLGALRFAEKNR
                     QDIAILHGNKPVLIVFPSIQRVLLTESVQKLEELCKDENLQVSCKTVPDNPQWREKAK
                     VGIMSCMWQFSIWTAQGRLIYPISPDTPFTLKSWPNLTRLANVPGSIRLSAFLTKASV
                     NLNVLYKVMPLNLNDILNYLAATYTTGFLSVDLKTVSQQAYSDMADKINIGADSASDS
                     EMMKKAEKITTSSQSQSRGLLQRLMKKLLGS"
     gene            complement(3262..4698)
                     /locus_tag="WHR07_000264"
     CDS             complement(3262..4698)
                     /locus_tag="WHR07_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEZ2129535.1"
                     /translation="MENSLIIGLALAVLLMLLVMRAKQGKKTPKRKSQGVGNTQGQTP
                     GSNDSDWVDQIGQSVSDGTQPDWSWNESAETASAAVSAQEVDPLTEYQVYKQFGYQGK
                     AAESLAAYLDGIPDGEAKPENLIRELLDINLEVGDVDVLADNLQKYGKLIPSELLAKY
                     IEQALQRDSNHLRIRVLAEEGLGWGTQEIEKRAEGGSATAASASPPPDAGGKAYEAEE
                     IKRIPIVRGKKDVSGISQEEIGAIAGLVRADQGAKILKDKVSYETASKQYDRAIQTSE
                     KPANLIIDALKLDYQHADIDRFAGHLWKLYQTLGNYGRQVKERMLGWGYSLGYHEVFD
                     DLEKGPNDRQIKDIGMGHGYLPKNIQKFKSQHRDLVLQDSSLINTGSSPADDAVKEVE
                     SLLMYGQIEAAMDVLEQAVLKYPDESQLYITLIDIYERTEDWDRLGQFLRVLRERADR
                     LPEEVVMLMSRLLQRMNQNIKKIKRYGK"
     gene            complement(4918..5700)
                     /gene="bioC"
                     /locus_tag="WHR07_000265"
     CDS             complement(4918..5700)
                     /gene="bioC"
                     /locus_tag="WHR07_000265"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HEZ2129536.1"
                     /translation="MESLTAINKSRIRQAFQKALNDYDRHALIQQKMTINLMAHLQDY
                     LPDMPLENVLELGCGSGMLSALLQKQISANYWLFNDLCDVQPQLAEKLPQSFDFYCGD
                     AENFPFQRQFDLIASASAVQWFHQPDAFIAHCKTGLKANGLLAVATFGKDNLKEVRQI
                     TNIGLNYPTLSQWQTWLAKDFELLWCEDFKVILDFDTPLDVLKHLKYTGVTATNQKNW
                     TRKNLNGFIGDYLSAFSMPSGKVRLTYHPLFFIARYSAAGRQ"
     gene            complement(5688..6335)
                     /locus_tag="WHR07_000266"
     CDS             complement(5688..6335)
                     /locus_tag="WHR07_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HEZ2129537.1"
                     /translation="MKTKFYNHQGEHLILYFAGWGTPPDAVNHLILPENHDLLICYDY
                     QDLNLDFDFSAYRHIRLVAWSMGVWAAERALQGIRLKSATAVNGTGLPCDDNFGIPCA
                     VFKGTLENLTENTRLKFERRMCGDKASFEDYQQFSARPFDEIHQELIALFAMIGQDRR
                     ADLIRWTNALVGSGDKIFMPANQHRYWTPRCTVREIDGGHYLFSRFTHWSALWNH"
     gene            complement(6345..7487)
                     /gene="bioF"
                     /locus_tag="WHR07_000267"
     CDS             complement(6345..7487)
                     /gene="bioF"
                     /locus_tag="WHR07_000267"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HEZ2129538.1"
                     /translation="MKVFKQQLEQLGAQNQYRSIPDLIHQGRYITRENCKMLNMSSND
                     YLGLASDENLRRSFLQQYGGNFPSFTSSSSRLLTGNFPIYTDLEQLVAQRFQRESALL
                     FNSGYHANLGILPALTTTKSLILADKFVHASMIDGIRLSRCAFFRYRHNDYEHLKNLL
                     EKNVGKFDRTFIVTESVFSMDGDVADLKQLVQLKKQFPNTYLYVDEAHAIGVYGQNGL
                     GIAERDNLIAEIDLLVGTFGKALASVGAYAVCNQVLKECLINQMRPLIFSTALPPFNV
                     AWTYFIFERLPQFSKERSHLEQLSAFLRREVAHRTQIMPSQTCIVPYILGGNEAALAK
                     AEYLQRQGYYCLPIRPPTVPKGTSRIRLSLTADMTMDEVRQFAACL"
     gene            complement(7509..7646)
                     /locus_tag="WHR07_000268"
     CDS             complement(7509..7646)
                     /locus_tag="WHR07_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009346942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA methyltransferase"
                     /protein_id="HEZ2129539.1"
                     /translation="MATETNVAEISALDYEGRGVAKVGGKTVFIKRALLDCLMLGWFR
                     L"
     gene            7710..8786
                     /locus_tag="WHR07_000269"
     CDS             7710..8786
                     /locus_tag="WHR07_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEZ2129540.1"
                     /translation="MICRKPIGHTPYFDMNKTICRTAALLISGFSYANTVIPDVSPVA
                     QGQHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKS
                     IQKERGDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHGCVRMKS
                     PDALEFAKTIASGSPASVIYQMAGLNEDADRNLWLAAFRDPYGKNNLDIASLKKSIAQ
                     WAKTQGKTIAPEKVDAVLKDRTGSAVCLTCGKNGKMKMPLKSLAWIQGSSSYSQAEVI
                     EQTEETNSAEISETRTPEVPDVHTPEAQPHLNTQSDGTPTAYTEPAADSSPQVETPDQ
                     AASEPVDVLFSIDVIRQGNLRLGN"
     gene            complement(8993..10459)
                     /locus_tag="WHR07_000270"
     CDS             complement(8993..10459)
                     /locus_tag="WHR07_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HEZ2129541.1"
                     /translation="MMKLGFKPIPLAIAAVLCALVLALPVPDGVKPQAWTLLAMFVGV
                     IAAIIGKAMPLGALSIIAVGLVAVTGVTADKPGAAMSDALSAFANPLIWLIAIAVMIS
                     RGLLKTGLGMRIGYLFIAVFGRKTLGIGYSLALSELLLAPVTPSNTARGGGIIHPIMQ
                     SIAGSYGSNPAKGTEGKMGKYLALVNYHSNPISSAMFITATAPNPLIVNLIAENLGSS
                     FRLSWGAWAWAMAVPGVIAFFVMPLILYFLYPPEIKETPNAVQFAKDRLREMGKMSAD
                     EIIMAVIFGILLLLWADVPALITGNHAFSINATATAFIGLSLLLLSGVLTWDDVLKEK
                     SAWDTIIWFGALIMMAAFLNKLGLIKWFSGVLAESVGGLGVSGTAAGVILVLAYMYAH
                     YMFASTTAHITAMFGAFFAAAVSLNAPAMPTALMMAAASNIMMTLTHYATGTSPVIFG
                     SGYTTMGEWWKAGFIMSVVNFLIFFVIGSIWWKVLGYW"
     gene            complement(10657..11580)
                     /gene="speB"
                     /locus_tag="WHR07_000271"
     CDS             complement(10657..11580)
                     /gene="speB"
                     /locus_tag="WHR07_000271"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HEZ2129542.1"
                     /translation="MQYSTLAGQTDNSLVSNNFGFLRLPLNFMPYESHADWVITGVPY
                     DMAVSGRSGARFGPEAIRRASVNLAWEHRRFPWTFDVRERLNIIDCGDLVFSFGDSRD
                     FVEKMEAHAGKLLSSGKRCLSLGGDHFITLPLLRAHARYFGKLALIHFDAHTDTYDNG
                     SEYDHGTMFYTAPKEGLIDPSRSVQIGIRTEHSKKLPFTVLTAPQVNEDSVEETVRKI
                     KETVGNMPVYLTFDIDCLDPSFAPGTGTPVCGGLSSDRALKILRGLTDLDIVGMDVVE
                     VAPSYDQSDITALAGATIALEMLYLQGAKKD"
     gene            complement(11679..13571)
                     /gene="speA"
                     /locus_tag="WHR07_000272"
     CDS             complement(11679..13571)
                     /gene="speA"
                     /locus_tag="WHR07_000272"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HEZ2129543.1"
                     /translation="MPILTIREVCNINHWGIGYYDVDDSGEIIVRPNPSQHNQTVSLQ
                     KLTEAVQQKHQARLPVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQ
                     HRRVIESLMSSGQPHGLEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEK
                     LGHQVYLVIEKLSEIQMVLEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLS
                     ASQVLQLVDILKQKNRLDCLQLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNI
                     RCFDVGGGLGVDYEGNRTQSDCSVNYSLNEYASTVVWGISQACLEHGLPHPTIITESG
                     RGITAHHAVLVANVIGVERYKPRRLDAPSPEAPRVLHSMWETWTDISASREKRSLRSW
                     IHEGQFDLADVHNQYNVGLLSLAQRAWAEQLYLNICHEVGELFNEKHRSHRTIIDELQ
                     ERFADKLYVNFSLFQSLPDAWGIDQLFPVCPITGLNEPIARRAVLLDITCDSDGTIDH
                     YIDGDGIAGTMPMPDYPEEEPPLLGFFMVGAYQEILGNMHNLFGDTATADVVVGEDGQ
                     FTVIDYDEGNTVADMLEYVYQDPKELMKRYREQIEHSDLPASQAMSFLKELEAGLNGY
                     TYLEDE"
     gene            complement(13738..14022)
                     /locus_tag="WHR07_000273"
     CDS             complement(13738..14022)
                     /locus_tag="WHR07_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEZ2129544.1"
                     /translation="MKKLLLAAVVSLSAATAFASDSAERQIYSDPNFEQNRVKAVKML
                     EQRGYQVHDVDADDHWGKPVLEVEAYKDGREYDIVLSYPDLKIIKEQLDR"
     gene            complement(14173..15981)
                     /gene="aspS"
                     /locus_tag="WHR07_000274"
     CDS             complement(14173..15981)
                     /gene="aspS"
                     /locus_tag="WHR07_000274"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEZ2129545.1"
                     /translation="MRTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGI
                     VQVVIDPDTPEAFAAADSARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVL
                     NAAATPPFQIDDENISENVRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFID
                     IETPMLTRSTPEGARDYLVPSRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFR
                     DEDLRADRQPEFTQIDLETSFLNEDEIMDITEGMAKQVFKDALNVDLGDFPRMPYAEA
                     MFYYGSDKPDMRINLKFTELTDLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKE
                     IDEYTKFVGIYGAKGLAYIKVNDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGTQ
                     NGDIIFFGADKTKVVNEAIGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEA
                     DRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQEKV
                     FAALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFPKT
                     QRAQCLLTNAPNSVDDKQLRELSLRLRQKAAETKEA"
     gene            complement(16039..16740)
                     /locus_tag="WHR07_000275"
     CDS             complement(16039..16740)
                     /locus_tag="WHR07_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HEZ2129546.1"
                     /translation="MTEPAAEGGKAAKALKKYLITGILVWLPIAVTVWVVSYIVSASD
                     QLVNLLPKQWRPQYVLGFNIPGLGVIVAIAVLFVTGLFAANVLGRQILAAWDSLLGRI
                     PVVKSIYSSVKKVSESLLSDSSRSFKTPVLVPFPQSGIWTIAFVSGQVSNAVKAALPK
                     DGDYLSVYVPTTPNPTGGYYIMVKKSDVRELDMSVDEALKYVISLGMVIPDDLPVKTL
                     AGPMPSEKADLPEQQ"
     gene            complement(16883..18031)
                     /locus_tag="WHR07_000276"
     CDS             complement(16883..18031)
                     /locus_tag="WHR07_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HEZ2129547.1"
                     /translation="MPTMGAEMNTRNMRYILLTGLLPMASAFGETALQCAALTDNVTR
                     LACYDRIFAAQLPSSAGQEGQESKAVLNLTETVRSSLDKGEAVIVVEKGGDALPADSA
                     GETADIYTPLSLMYDLDKNDLRGLLGVREHNPMYLMPLWYNNSPNYAPGSPTRGTTVQ
                     EKFGQQKRAETKLQVSFKSKIAEDLFKTRADLWFGYTQRSDWQIYNQGRKSAPFRNTD
                     YKPEIFLTQPVKADLPFGGRLRMLGAGFVHQSNGQSRPESRSWNRIYAMAGMEWGKLT
                     VIPRVWVRAFDQSGDKNDNPDIADYMGYGDVKLQYRLNDRQNVYSVLRYNPKTGYGAI
                     EAAYTFPIKGKLKGVVRGFHGYGESLIDYNHKQNGIGIGLMFNDLDGI"
     gene            complement(18192..18455)
                     /gene="rpsT"
                     /locus_tag="WHR07_000277"
     CDS             complement(18192..18455)
                     /gene="rpsT"
                     /locus_tag="WHR07_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEZ2129548.1"
                     /translation="MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDK
                     AAAQAVYQESVKVIDRIADKGVFHKNKAARHKSRLSAKVKALA"
     gene            18758..19900
                     /locus_tag="WHR07_000278"
     CDS             18758..19900
                     /locus_tag="WHR07_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ2129549.1"
                     /translation="MKKSVLAVLAALSLAACGGSEKNAVQPQADAASAANAEAAATDT
                     LNIYNWSNYVDESTVEDFKKANNLKLTYDLYENNETLEAKMLTGKSGYDLVVPGIAFL
                     PRQIEAGAYQKVNKDLIPNYKNIDPELLKMLETADPGNQYAVPYFSGVNTIAITAKGK
                     ELLGGKLPENGWDLLFKPEYTHKLKSCGIALWDTPSEMFPILLNYLGKDPKGSNPEDL
                     KAAAEVLKSIRPDVKRFSPSIIDELARGDICLAAGNGGDLNLAKARSEEVKNNVGIEV
                     LNPKGMGFWIESWLIPADAKNVANAHKYINYTLDPEIAAKNGIAVTFAPASKPAREKM
                     PAELVNTRSIFPNEQDMKDGFVMPQMSTDAKKLSVSLWQKIKVGTN"
     gene            complement(21224..23968)
                     /gene="tbpA"
                     /locus_tag="WHR07_000279"
     CDS             complement(21224..23968)
                     /gene="tbpA"
                     /locus_tag="WHR07_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein TbpA"
                     /protein_id="HEZ2129550.1"
                     /translation="MQQQHLFRFNILCLSLMTALPAYAENVQAGQAQEKQLDTIQVKA
                     KKQKTRRDNEVTGLGKLVKSSDTLSKEQVLNIRDLTRYDPGIAVVEQGRGASSGYSIR
                     GMDKNRVSLTVDGVSQIQSYTAQAALGGTRTAGSSGAINEIEYENVKAVEISKGSNSV
                     EQGSGALAGSVAFQTKTADDVIGEGRQWGIQSKTAYSGKNRGLTQSIALAGRIGGAEA
                     LLIHTGRRAGEIRAHEDAGRGVQSFNRLVPVEDTNQYAHFVVEEECPNGYAACKDKPK
                     KDVVGKDERQTVSTRDYTGPNRFLADPLSYESRSWLFRPGFRFENKRHYIGGILEHTQ
                     QTFDTRDMTVPAFLTKAVFDANSKQAGSLPGNGKYVGNHKYGGLFTNGENGALVGAEY
                     GTGVFYDETHTKSRYGLEYVYTNADKDTWADYARLSYDRQGIGLDNHFQQTHCSADGS
                     DKYCRPSADKPFSYYKSDRVIYGESHRLLQAAFKKSFDTAKIRHNLSVNLGFDRFGSN
                     LRHQDYYHQSANRAYSSKTPPKNGNKNISPNGSKEKPYWVSIGGGNVVTEQICRLGNN
                     TYTDCTPRSINGKSYYAAVRDNVRLGRWADVGAGLRYDYRSTHSDDGSVSTGTHRTLS
                     WNAGIVLKPADWLDLTYRTSTGFRLPSFAEMYGWRAGVQSKAVKIDPEKSFNKEAGIV
                     FKGDFGNLEASWFNNAYRDLIVRGYEAQIKNGKEEAKGDPAYLNAQSARITGINILGK
                     IDWNGVWDKLPEGWYSTFAYNRVHVRDIKKRADRTDIQSHLFDAIQPSRYVVGLGYDQ
                     PEGKWGVNGMLTYSKAKEITELLGSRALLNGNSRNTKATARRTRPWYIVDVSGYYTIK
                     KHFTLRAGVYNLLNYRYVTWENVRQTVGGAVNQHKNVGVYNRYAAPGRNYTFSLEMKF
                     "
     gene            complement(24055..26184)
                     /locus_tag="WHR07_000280"
     CDS             complement(24055..26184)
                     /locus_tag="WHR07_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ2129551.1"
                     /translation="MNNPLVNQAAMVLPVFLLSACLGGGGSFDLDSVDTEAPRPAPKY
                     QDVSSEKPQAQKDQGGYGFAMRLKRRNRHPQAKEDKVELNPNDWEETGLPSKPQNLPE
                     RQQSVIDKVKTDDGSNIYTSPYLTQSNHQNGSTNSGANQPKNEVKDYKNFKYVYSGWF
                     YKHAESEREFSKIKFKSGDDGYIFYHGKDPSRQLPTSEKVIYKGVWHFVTDTEKGQKF
                     NDILETSKGQGDRYSGFSGDDGETTSNRTDSNLNDKHEGYGFTSNLEVDFGSKKLTGK
                     LIRNNRVTNATTNDKYTTQYYSLDAQITGNRFNGKAIATDKPDTGGTKLHPFVSDSSS
                     LSGGFFGPKGEELGFRFLSDDKKVAVVGSAKTKDKTENGAVASGGTDAAASNGAAGTS
                     SENSKLTTVLDAVELKLGDKEVQKLDNFSNAAQLVVDGIMIPLLPEASESGNNQANQG
                     TNGGTAFTRKFDHTPESDKKDAQAGTQTNGAQTASNTAGDTNGKTKTYEVEVCCSNLN
                     YLKYGMLTRKNSKSAMQAGESSSQADAKTEQVEQSMFLQGERTDEKEIPSEQNIVYRG
                     SWYGYIANDKSTSWSGNASNATSGNRAEFTVNFADKKITGTLTADNRQEATFTIDGNI
                     KDNGFEGTAKTAESGFDLDQSNTTRTPKAYITDAKVQGGFYGPKAEELGGWFAYPGDK
                     QTKNATNASGNSSATVVFGAKRQQPVR"
BASE COUNT         6562 a         6748 c         6195 g         6854 t
ORIGIN      
        1 aattaggagg tatttggggt gaaaacagcc gaaaacctgt gttggggttt cggctgtcgg
       61 gagggaaagg aattttgcaa aggtctcaat tagtatagtg gattaacaaa aatcaggaca
      121 aggcgacgaa gccgcagaca gtacaaatag tacggaaccg attcactcgg tgcttcagca
      181 ccttaaagaa tcgttctctt tgagctaagg cgagccaatg ccgtactggt ttttgttaat
      241 ccactataaa atcgagttta tcctagttgt ccaggacagc ccctattttt tcataaccat
      301 cacgaaagga attttgcaaa gattttattc catctcaaaa caatcatctc aaaaatgcgt
      361 ttctgaccgc cggtaaaaca aaaccctcta agaaaatact tagagggttt tgaaatttgg
      421 ctccccgacc tgggctcgaa ccagggacct gcggattaac agtccgtcgc tctaccgact
      481 gagctatcgg ggaataagcg cgaataataa aacagaaata ccgaacgtgt caatataaat
      541 tgacaatcga ttgcacttta tctgcaagcc cgcaatcttt atatgttata tggcttccgc
      601 aatatgcctt gccgcacgtt tggcatccaa taggattaaa ccaagtctgc cggtttcttt
      661 tgccaccagc accaacacgg catctttacc cgcctgactt aaaaggatat agcctgattt
      721 tcctttaatc atcacttgtt ccaattcccc gcaggcgagt tcctgcaccg agcgactccc
      781 caaagcaagc aaagtggcag aaatcgcccc taccctgtcc gaattcaaat gtgaaggaag
      841 cattgtcgcc atcggcaatc cgtcggttga gataacggca gacgcgataa tatccgtaga
      901 tgtattgttt aaatcttcaa ggattgaaat caataattgc tgcataaccc ctcctctctc
      961 ccaagtttta cacgcggttg ctgtaacggc ggtataaaat ccttaccaaa gtaacaaatg
     1021 cctctttgcc caaatcggga atgccgccga taaccaaaat aaatttggtt gaaccgatat
     1081 acaatgggaa aaatgtcaat tcgctctgac cggaaggatc gcaaacgccc caagcgttat
     1141 tgttgatata caggttgttc ttaatcagca gccggtattt cttttccatc tgtgcgactt
     1201 ctgccgccaa caaccccaac tcttccgccg cctcatgatg gaaattggcg ttggcaagat
     1261 acagaccgtt ccgatcgacc aataacgcct taccgctgcc ggacaattgt tccatcagca
     1321 acggcaattg ctcgtccgac aaattgatgc cgtctgaatg accgttttca tcgccataga
     1381 ggaattcgag tttttgcaaa cggtacaaca ggttcaaagc ggtatcgatg tcggcggtgt
     1441 ccgcccaggt aagcagcttc tcactgctga ccatttcgtc cgcatccgct ttcaacaggc
     1501 tgtgcaacaa agttttaccg gcactggggg catcgctgga tacggcataa aatgcaccgg
     1561 caggagtcag gcggggatat aaatttgctt gtagtgaaag tgttgattcc atattaaacc
     1621 tccagtcccg gatcaataga aaataacatt gcgctaacca attgttttac gtcatcttcc
     1681 ttacgggcat caatttcaaa aaccggaaca ttaagattat gttttgcaag atatttgtga
     1741 tacacgtcga taccgggctg agagcgtata tccatcttgg taataccgac aacgacgggt
     1801 gccttctcca gcagccctcg aaacgaatgt aaaaagaatt ccaaatcttt caacggattg
     1861 gttcgggcat tatctaaaag caagaccaaa cccatactgc cttggcttaa gatttcccac
     1921 ataaagttga accgttcctg accgggcgta ccatataaat ggactttggt atcctcatcc
     1981 aagctgatgg ccccgtagtc catcgccact gtcgtattcc ttttcctatc caaagtcata
     2041 tcggatgcgg aagcatcggt ctgaacgagt gcttcgtccg aaatagccgc aatggcagtg
     2101 gttttcccta cgccgacagg tcctgtgaaa ataattttat tttctctcat ctctccgcct
     2161 cttagctgcc caacagtttt ttcatcagcc tttgcagaag accgcgcgac tgggattggg
     2221 atgatgttgt gattttttcc gcttttttca tcatttcact atcagaggca gaatcggctc
     2281 cgatatttat tttatccgcc atatcggagt atgcctgttg tgaaaccgtt tttaaatcta
     2341 ccgacaaaaa cccggttgta taggttgccg caagataatt cagaatatca ttgaggttta
     2401 aaggcatcac tttatacaac acgttaaggt tgacggatgc cttggtcaga aatgccgaca
     2461 agcgtatcga ccccggcaca tttgccaacc gggtcaggtt tggccaagat ttcaacgtaa
     2521 acggagtatc gggagaaatc ggataaatca acctgccctg cgctgtccaa atggaaaact
     2581 gccacataca ggacataatg cctactttag ccttttcgcg ccattgcggg ttatcgggaa
     2641 cagtcttgca gctgacctgc aaattttcgt ctttgcacaa ttcttcgagt ttttgcacac
     2701 tttctgtcag caaaacccgt tgtatcgagg ggaaaacaat aaggaccggc ttatttccat
     2761 gcaagatagc gatgtcctgc ctgttctttt ccgcaaaccg caacgccccc aataatcctt
     2821 tattcgggtt aaactggcgt atcgtaaccg tacgctgcac attcccgtta tttttcgccg
     2881 accggtctgc gggtgcaata aacgatttcc cataaacatt ctcgccctgc aacaatttgc
     2941 ggagcatagg aaacaatgtt tcaaaccgaa tcggtttggg caggtaggga acttcagaat
     3001 cgggaacttt ctccgaacag acggcgacgg gtatatcctt ataacgctcg gcaagctctt
     3061 tccaaagttc aaaaccgccc tcggcatcgg tatccgccaa aaccaaatcg ggcacggcac
     3121 tgccgtctga aggggatact gtttcataac gggtggtatt gtgcattttg aatgccattt
     3181 tgaaaacgga ttcctgctgc gccgtcatcc ccgccaacat tacgcgtact gttttaattt
     3241 tcggcagttg aacttccatt tttattttcc gtaccgtttt atttttttaa tattttgatt
     3301 catacgctgc agcagccggc tcatcagcat aacgacctct tcaggaagcc tgtccgcacg
     3361 ttccctcaat acccttaaaa actgccccaa cctatcccaa tcttcagtac gttcataaat
     3421 atcgatcaac gtaatataaa gctgggactc gtcgggatat ttcaataccg cctgctccaa
     3481 cacatccatt gccgcttcaa tctgaccata catcagcaac gactctactt ccttaaccgc
     3541 atcgtctgcc ggagacgaac cggtgttgat caacgaagaa tcttgaagca ccaaatcccg
     3601 atgttgcgat ttgaatttct gtatattttt cggcagatac ccgtgcccca taccgatgtc
     3661 tttgatttgc cggtcgttcg gccctttttc caaatcatcg aaaacttcat ggtaacccaa
     3721 gctgtacccc caccccagca tccgctcttt aacctgcctg ccgtagttgc ccaacgtttg
     3781 gtaaagtttc cacaaatgtc cggcaaaacg gtctatgtcc gcgtgttggt aatcgagttt
     3841 caacgcatcg ataatcaggt ttgcaggttt ttcggaagtt tggatggcac ggtcgtattg
     3901 tttcgatgcc gtttcatagc tgactttgtc tttaaggatt ttcgcacctt gatcggcacg
     3961 aaccagaccg gcaatcgcac cgatttcctc ttgactgatt ccggacacgt cttttttgcc
     4021 ccgcacaatc gggatgcgct tgatttcttc ggcttcataa gccttaccgc cggcatccgg
     4081 tgggggcgat gcggaagctg ccgtcgcaga accgccttcc gcacgttttt caatctcctg
     4141 agtaccccat cccaaaccct cttctgccaa gacgcggata cgcaaatggt ttgaatcgcg
     4201 ctgtaatgcc tgttcgatat attttgccaa aagttcggaa ggaatcagtt tgccgtattt
     4261 ttgcagattg tctgccaaaa catcgacatc ccccacttcg agattgatat cgagcagctc
     4321 gcggataagg ttttcaggtt tcgcttcacc atccggaatg ccgtccagat aggcagccaa
     4381 agattcggca gccttgccct gataaccgaa ttgcttataa acctgatact ccgtaagcgg
     4441 atcgacttct tgcgcggata cggcggcgga tgcggtctcg gcactttcgt tccaagacca
     4501 gtcgggttgc gtgccgtctg aaaccgattg tccaatctga tcgacccagt ccgaatcatt
     4561 gcttccgggt gtctgcccct gcgtattgcc gacaccttgg gatttgcgct tcggtgtttt
     4621 cttaccctgc ttcgcacgca taaccaaaag catcagcaat accgccagtg ccaaaccgat
     4681 aattaatgag ttttccaaag gatactcccg ataccgtaac gagcggatag ctgaccgcct
     4741 gcaacggcca ttgtccgctt ttattattaa cgatttactg aaatagactt gtaagtttta
     4801 aatcatacca taatttaacg tttaacaata tgccttctgc acaagcctcg ccatattacc
     4861 ttttacccac atcagtatca atacccgata taaaaataac tttgcccata agctgcctta
     4921 ttgcctgccc gccgcagagt agcgcgcgat aaaaaataac ggatgataag tcaggcgcac
     4981 tttgcccgac ggcatactga acgccgacaa gtaatcgcca ataaatccat tgagattttt
     5041 tcttgtccaa tttttttggt tcgtggctgt tacgcctgta tatttaaggt gtttgagtac
     5101 atctaacggc gtatcaaagt ctagtattac cttaaaatcc tcacaccata aaagctcaaa
     5161 atctttggct aaccaagtct gccattggga taaagtcggg taatttaagc ctatatttgt
     5221 aatttggcgg acttctttta aattgtcttt gccaaaggtt gcaaccgcca ataatccgtt
     5281 tgctttcaag cctgttttgc aatgggcgat aaaagcgtcg ggttgatgaa accattgcac
     5341 ggcagatgcg cttgcgatta agtcaaattg tcgttgaaaa ggaaagtttt ccgcatcgcc
     5401 gcaataaaaa tcaaaggatt gcggcagttt ttcagccagt tggggctgca catcgcacaa
     5461 atcattaaat aaccaataat tcgctgaaat ctgtttttgc agcaaggcac tcaacattcc
     5521 tgagccgcag cccaattcca acacgttttc caatggcata tctggcaaat aatcttgcaa
     5581 atgcgccatt agattaatcg tcattttttg ttggattaag gcgtgccggt cataatcgtt
     5641 taatgctttt tggaaagcct gccgaatgcg cgatttattt atggcagtca gtgattccat
     5701 agtgccgacc aatgggtgaa tcttgaaaac aggtaatgtc cgccgtcaat ttcccgaacg
     5761 gtgcaacgcg gtgtccaata tcggtgctga ttggcaggca taaaaatttt atcgcccgat
     5821 ccgaccaagg catttgtcca gcgaatcaaa tctgcgcgcc tatcttgccc gatcatcgca
     5881 aaaagtgcga taagttcttg atgaatttcg tcaaacggac gggcggaaaa ttgttggtaa
     5941 tcttcaaaag atgctttatc gccacacatt ctgcgttcaa attttaaacg ggtgttttcc
     6001 gtgaggttct ccaatgtgcc tttaaaaacg gcgcaaggga taccgaaatt atcatcgcaa
     6061 ggcaaacctg tgccattcac tgccgttgcg gattttaatc ttattccttg caatgccctc
     6121 tctgccgccc aaacgcccat tgaccacgcc accaaacgga tgtgccgata ggcggaaaaa
     6181 tcaaaatcca aatttaaatc ttgataatca tagcaaatca ataaatcgtg attttccggc
     6241 aaaatcaaat gatttacagc atcgggcggc gttccccaac ctgcaaaata caggattaaa
     6301 tgttcgcctt gatgattgta aaattttgtt ttcatatcat atccttacag gcacgccgca
     6361 aactgccgca cttcatccat tgtcatatct gccgtcaaag acaatcgtat tctggatgta
     6421 ccttttggta ctgtcggtgg tctgatgggc aggcaataat aaccctgcct ttgcagatat
     6481 tccgctttgg caagggcggc ttcattcccg cctaaaatat aggggacgat acaggtttgg
     6541 ctcggcatta tttgcgtccg atgcgccact tcccgccgta aaaatgcgct taactgctca
     6601 agatggcttc tttcttttga gaattgcggc aatcgttcaa aaataaaata agtccaagcc
     6661 acattaaacg gcggcaatgc ggttgaaaaa atcaatggac gcatttgatt aatcaaacat
     6721 tctttcaata cttggttgca gacggcatac gcccccaccg aggctaaggc tttaccgaaa
     6781 gtgccgacca gtaaatcaat ctcggcaatc aaattatccc gttcggcaat ccccaatccg
     6841 ttttgcccat aaacaccgat tgcgtgggct tcatccacat aaagataagt attgggaaac
     6901 tgttttttta attggacaag ctgtttcaaa tccgccacat cgccgtccat actgaaaaca
     6961 gattcggtaa cgataaaagt gcggtcaaat tttccgacgt ttttttcaag cagatttttc
     7021 aaatgttcat aatcattatg acgataacgg aaaaacgcac accggctcaa acggatgccg
     7081 tcaatcatac tggcgtgaac aaatttatct gccaaaatca aacttttcgt cgtcgtcaaa
     7141 gcaggcaaaa taccgagatt ggcgtgatag ccgctgttga acaataacgc gctttcccgt
     7201 tggaaacgtt gtgcgacaag ctgctcaaga tcggtataaa taggaaagtt gcccgttaat
     7261 aaacgcgatg aagaactggt aaaagaggga aaattaccgc cgtattgctg caaaaaagac
     7321 cggcgcaagt tttcatctga tgccaaaccc aaataatcat tagacgacat attcagcatt
     7381 ttgcagtttt cccgcgtaat ataccgccct tgatgaatca aatccggaat cgaacgatat
     7441 tggttttgcg cgccgagttg ttcaagctgt tgtttaaaaa ccttcattat gatgtaaata
     7501 ttcctgagtt aaagcctgaa ccaacccagc atcaaacaat caagtaatgc ccttttaata
     7561 aaaaccgttt tgccgccgac ctttgccaca cccctgcctt cataatccaa ggcggaaatt
     7621 tccgcgacat ttgtttccgt tgccattacc caatccgtcc gcactgtacc gaagcgcata
     7681 ttttcgcaca aattggtacg gtttcaggta tgatttgccg aaaacctatc ggacacacac
     7741 catattttga tatgaataaa acaatctgcc gcactgctgc actattgata agcggttttt
     7801 catacgcaaa caccgtcatt cccgatgtct cccccgtcgc acaaggtcaa catgtcttca
     7861 ttaacatccc tcagcaacgc ctgttcctct acaccgacgg caaactgacc aaggtttatc
     7921 ccgttgcagt aggtcgggcg atgacgcaaa ccaatctagg cgaacataaa atcggtgcga
     7981 aagcctataa ccctgtttgg tacatcccca aatccataca gaaagaacgc ggcgacggcg
     8041 taaaaaccat agccgccggc ccggacaacc ctttggggcc ggtttttgtc cgcttaggcg
     8101 accccaaact cggtttgggc atacacggga ccaatgcgcc ggccagcgtc cccggggttc
     8161 ggagtcacgg ctgcgtccgc atgaaatcgc ccgacgcgct cgagtttgcc aaaaccatcg
     8221 ccagcggctc gcccgcctcc gtcatctatc aaatggcggg tctcaatgaa gatgcggatc
     8281 gcaacctgtg gcttgccgcc ttccgcgacc cttacggtaa gaacaacctt gacatcgcct
     8341 ctctgaaaaa aagtattgcg caatgggcaa aaacacaggg taaaaccatc gcgcccgaga
     8401 aagtcgatgc tgtactcaaa gaccgcaccg gatcggccgt ctgcctgacc tgcggcaaaa
     8461 acggcaagat gaagatgccg ctcaaatcgc tggcgtggat acagggttct tcctcataca
     8521 gccaagctga agtcattgaa caaactgagg aaaccaactc tgccgaaata tccgagacac
     8581 gcacgcccga agtgcctgat gtacacacgc ccgaggcaca accgcattta aatacccaat
     8641 ccgacggcac gccgactgcc tataccgaac cggctgccga ttcatcgccg caagtagaaa
     8701 cacctgatca ggctgcttcc gagccggttg atgtattatt ttcaatagat gtgatacggc
     8761 agggaaattt gcgtttaggt aattgaataa ccttctgatt atttaatgct tatgtttatc
     8821 agaagttgat aggcggtttg gtttttgttt ggcttttcct acaccgccgc ctgccgcttt
     8881 ctgcaacatt caagcgcaca aatatgccat ctgaaggctt tagacggcat atttcacgat
     8941 aatagtcgcc caatcaaata aacacagatt ggaaatttat tttatttttc ccttaccaat
     9001 accccagaac tttccaccaa atgctgccga taacgaaaaa aatcagaaaa ttgactacgc
     9061 tcatgataaa acccgccttc caccattctc ccattgtggt gtagcccgaa ccgaaaatca
     9121 caggcgaagt accggtcgca taatgagtga gggtcatcat aatgttagat gcggccgcca
     9181 tcatcagcgc ggtcggcatc gccggggcat tcagtgaaac ggcagcagcg aaaaatgcgc
     9241 cgaacatagc ggtaatatgt gcagtagtac tggcaaacat ataatgcgca tacatataag
     9301 caagcacgag gattacgccc gcagccgtgc cgctaacgcc caaaccgccg acactttccg
     9361 ccaacactcc ggagaaccat ttaatcagtc cgagtttatt taaaaatgcg gccatcataa
     9421 tcaatgcgcc aaaccaaata atcgtatccc acgcactttt ttctttcaaa acatcgtccc
     9481 aagtcaatac accggaaagc aaaagcaggc ttaatccgat aaatgcggtg gcggtggcgt
     9541 tgatactaaa agcgtgattg ccggtaataa gggcgggaac atctgcccac aacagcagca
     9601 agataccgaa aatgaccgcc ataatgattt cgtctgccga cattttaccc atctccctca
     9661 gacggtcttt ggcaaattga acggcattgg gcgtttcttt aatttcaggc ggatacaaaa
     9721 aatataaaat caaaggcata acgaaaaagg cgataacgcc gggaacagcc attgcccacg
     9781 cccacgcccc ccaagaaaga cggaaactac tgcctaaatt ttcggcaatc aagttgacga
     9841 ttaaagggtt gggggcagtt gcagtaataa acatagccga cgaaatggga ttggaatgat
     9901 agttgaccaa agccaaatat ttacccatct tgccttctgt gccttttgcg ggattggagc
     9961 cgtaactgcc ggcaatcgac tgcataatcg gatgtataat gccgccgccg cgcgcggtat
    10021 tggaaggggt aacgggagcc agcagcagtt cggaaagagc gagactgtaa ccgatgccca
    10081 gcgtttttct tccaaaaacg gcgataaaca aatatccgat acgcatcccc agccctgttt
    10141 tgagcaaacc gcgcgaaatc ataactgcga tggcaatcag ccaaatcaac ggattggcga
    10201 acgcactcaa cgcatcgctc atcgccgcgc ccggtttgtc ggcggttacg ccggttactg
    10261 cgaccaaccc gacggcaata atcgacagcg cgcccaacgg catggccttg ccgataatgg
    10321 cggcaatcac accgacaaac atggccagca gcgtccaagc ctgaggcttg accccgtcgg
    10381 gtacgggcag tgccaaaacc agggcgcaca atactgcggc aatggcgagg ggtatcggtt
    10441 tgaaacccaa tttcatcata ttgacctccg taaaaaagac cgtcccgaaa aatcggaaaa
    10501 ataatattta actaattgtt ttataatata tattcagata tttcaccgtc tttccgatat
    10561 gcggctccgg gcaacttttg tttcagtatt tgaattttca ttagactgaa tacgccgttt
    10621 gaacggcacg gcgaaaaccc gggggatgcc ggacgttcag tcctttttcg caccttgaag
    10681 gtaaagcatt tccaaggcaa ttgtggcgcc ggccaaagcg gtaatgtcgg attggtcgta
    10741 agagggggca acttctacaa catccatacc gacgatgtcg agatccgtca gcccacgtag
    10801 gatttttaat gccctgtcgc tgctcaagcc gccgcatacg ggcgtaccgg tcccgggggc
    10861 gaacgacggg tcgaggcagt ctatgtcgaa agtcaggtaa acgggcatat tgccgacggt
    10921 ttctttgatt ttacggacgg tctcttcaac actgtcttca ttaacttggg gggcggtcaa
    10981 cacagtaaaa ggcaattttt tactgtgttc ggtacgtatg ccgatttgta cggaacggga
    11041 cgggtcgatg aggccttcct tgggggcggt atagaacatc gtaccgtggt cgtattcgct
    11101 gccgttgtcg taggtgtcgg tgtgcgcgtc aaaatgaatc agtgcgagtt tgccgaaata
    11161 gcgggcgtgg gcgcgcaaca acgggagggt aatgaaatgg tcgccgccca aactcaaaca
    11221 gcgtttgccg gaagaaagta atttgccggc gtgcgcttcc attttttcga caaaatccct
    11281 gctgtcgcca aaagaaaaaa ccaagtcgcc gcaatcaata atgttcaggc gttcgcgcac
    11341 atcaaatgtc catggaaacc tgcggtgctc ccaagcgagg ttgacggagg cgcgccggat
    11401 ggcttcagga ccgaaacgcg cgccggaacg ccctgaaacc gccatatcat aaggcacgcc
    11461 ggtaataacc caatcggcat gactttcata cggcataaaa ttaagcggca ggcgcaaaaa
    11521 cccgaaatta ttggaaacga gggagttgtc ggtttgtcct gccagtgtgc tgtattgcat
    11581 cgtaatgatt ccttgtaatt ggtttcaatc ggtcgtgatg attggtgttt gagtaagaaa
    11641 atcgggcttc agacgacata tccgatgcct tgatgcgtct attcgtcttc caaataggta
    11701 taaccattaa gccccgcttc gagttctttt aagaaagaca tagcctgcga ggcaggaagg
    11761 tctgaatgtt cgatttgttc gcgatagcgt ttcatcagct ctttcggatc ttgataaacg
    11821 tattcgagca tatcggcaac ggtgtttcct tcatcgtaat cgatgacggt aaattgtccg
    11881 tcttccccta caacaacatc ggcagtggca gtgtcgccga aaagattgtg catattgccg
    11941 agtatttcct gatatgctcc caccataaaa aagcctaaaa gcggcggctc ttcttcggga
    12001 taatcaggca taggcatcgt accggcgatg ccgtctccgt cgatgtagtg gtcaatcgta
    12061 ccgtctgaat cgcaggtaat gtccaacaac acggcgcggc gcgcaatcgg ttcattcaaa
    12121 ccggtaatgg gacaaacagg gaaaagttga tctatgcccc aagcatcggg caaagattgg
    12181 aagagtgaga aattgacata cagcttatcg gcaaaacgtt cttgcaattc gtcaataatg
    12241 gttcggtgag accggtgttt ttcattaaac aattcgccga cttcatgaca gatatttaaa
    12301 tacagttgct ccgcccacgc acgttgcgcc aaactcaaca gcccgacatt atactgatta
    12361 tgcacatcgg caagatcaaa ctgcccttcg tgtatccagc tgcgtaagga acgtttttcc
    12421 cgcgaggcgg aaatatccgt ccaagtttcc cacatactgt gcaacacacg cggtgcttcg
    12481 ggcgatggcg catccagccg gcgcggtttg taacgttcaa cgcctataac attagcaacc
    12541 aaaacggcgt gatgtgcggt aatgccgcgc ccgctctcgg taatgattgt cggatgcggc
    12601 agcccgtgtt cgagacaagc ctggctgatg ccccatacga ctgtggaggc atattcgttg
    12661 aggctgtaat taacggaaca atccgattgt gtgcggtttc cttcgtaatc cacgccaagc
    12721 ccgccgccta catcaaaaca gcggatattt acccccagtt tgtgcaactc aacataaaac
    12781 cgagccgatt cgtgtacacc tgtggcaaca tcacggatgt tcccaagctg cgagcctaaa
    12841 tggaaatgca aaagctgcag gcagtccagc ctgttttttt gtttcaaaat atcgaccagt
    12901 tgcaaaactt gggaagccga caagccgaat tttgattttt ccccacccga agactgccat
    12961 tttcccgaac cttgggaagc cagtctggcg cgcacaccca aacggggctt gatgccgagt
    13021 ttttccgcct cttccaatac catttgtatt tcggacagct tctcaatcac caaataaacc
    13081 tgatgcccca gtttttcgcc catcaaggcg aaacggatat attcacggtc tttatagccg
    13141 ttgcagacga ttaatgtttg ccgggtgccg gcgtgtgcca aaaccgccat cagttcggct
    13201 ttagaaccag cttccaaacc atgcggttgt ccgcttgaca taagcgattc gatgacgcgg
    13261 cggtgttggt tgaccttgat agggtaaacc aaacaataac cgcccttata gccgcactct
    13321 tcccgtgccg tctgaaaggc gcggttaatg tcgcggaggc ggtgttcgag gatttgcgga
    13381 aaacaaaaca aaacaggcag gcgcgcctga tgtttttgtt gcacggcttc agtcagtttt
    13441 tgcagtgaaa cagtttgatt gtgttgcgag ggattggggc ggacgatgat ttcgccggaa
    13501 tcgtcaacat cataataacc tatgccccaa tgattaatgt tgcacacttc acggatggta
    13561 aggataggca taataaacct gctccgtctg tcgtgttgaa aaggaatgat tataacaaat
    13621 cagcgtgaaa tgtcattttt ttaataagaa aagcctgcct catacctgat gaggaacagg
    13681 caaaatgccg tctgaacgct tcagacggca ttttggttca tctttccatc aaaggagtca
    13741 gcgatcgagc tgctctttga tgattttcag gtcggggtaa gacaacacga tgtcgtattc
    13801 gcggccgtct ttataggctt ccacttccag cacaggctta ccccaatggt cgtcggcatc
    13861 gacatcgtga acctgataac cgcgctgttc caacattttc acagctttta cgcggttctg
    13921 ttcaaaattg ggatcactgt aaatctgacg ctcggcagag tcgctggcaa atgcggttgc
    13981 ggcactcagg gaaacaacgg cagccaataa cagttttttc attttcagtc ctttctttat
    14041 cggttgattg aataagatgt gtttttcaat gccgccatta aaacacagca aaattaggtt
    14101 tgaattagag ggaagtcaag aagcgtaaat gccgtctgaa aaaaacagag ccgtcaaacg
    14161 gctccgtttt ccttatgctt ctttggtttc agccgccttt tggcgcaggc gcaggctcaa
    14221 ttcacgcaac tgcttgtcgt ccacgctgtt gggcgcgttg gtcagcaggc attgggcacg
    14281 ttgtgttttc gggaaggcaa tcacgtcgcg gatagattcg gcgccggtca tcagggtaac
    14341 caaacggtcg aggccgaatg caaggccgcc gtgaggaggc gcaccgaatt tcaggttgtc
    14401 caagaggaag ccgaatttct cttgttgctc ttcagggctg attttcagcg cggcaaacac
    14461 tttctcttgt acgtctgcac ggtggatacg gatagagccg ccgccgattt cccagccgtt
    14521 caataccatg tcgtaggcac gggccaggca gtttgcaggg tcggaaacca tcaggtcttc
    14581 atgaccttct ttaggcgcgg taaacggatg gtgtacggca acgtagcggt cggcttcttc
    14641 gtcgtattcg aacattggga aatcgacaac ccacaaaggt ttccattcgt ctgtgaagta
    14701 gccgttgtct ttgccgtgtt ccaagccgac tttgatacgc aatgcgccga tggcttcgtt
    14761 cacaactttg gttttgtccg caccgaagaa aataatatcg ccgttttgtg tgccggtacg
    14821 ctcgatgatt tctttcaggg cattctcaga caggaatttt acgattggag attgcaggcc
    14881 gctgtcttcg ccgtttgaga ggttgcccac atcgtttact ttgatgtatg ccagaccttt
    14941 cgcgccgtag atgccgacaa atttagtgta ttcgtcgatt tctttgcggc tgaattttgc
    15001 gccgttcggt acgcgcaggg cgactacacg gccgcctttc atatctgccg cgccacggaa
    15061 gactttgaat tcttccgttt tcatcaggtc ggtcaactcg gtaaatttca agttgatacg
    15121 catatccggt ttgtcagagc cgtagtagaa catggcttcg gcgtaaggca tacgcgggaa
    15181 gtcgcctaaa tctacgttta aagcatcttt gaagacttgt ttcgccatac cttcggtgat
    15241 gtccataatt tcatcctcgt tcaagaacga ggtttccaag tcgatttgag tgaattcagg
    15301 ctgacggtcg gcacgcaagt cttcgtcacg gaaacatttg gtaatttgat agtaacggtc
    15361 gaaaccggcc accatcaaca gttgcttaaa taattgcggt gattgcggca gcgcgaaaaa
    15421 ctcgcccgga tgaacgcggc tcggcacgag gtagtcgcgc gcgccttccg gagtggagcg
    15481 ggtcagcatc ggcgtttcga tgtcgatgaa gccttgcgcg tccagataac ggcgaacgcc
    15541 catagcgact tgataacgca ggcgcaggtt gcgttgcatc accggacggc gcaagtcgat
    15601 aacgcggttg gtcaggcgaa cgttttcgct gatgttttca tcgtcgattt ggaacggcgg
    15661 cgtggcggcg gcgttcaaga cttcgatttc tttggcaagg atttcgattt tgccggaaat
    15721 cattttgtcg ttggtcgtac cttcgggacg gttgcgtacg cggccggtaa tgctcaaaac
    15781 gtattcgttg cgagcggaat cggcagcggc aaacgcttcg ggcgtgtcgg ggtcaatcac
    15841 gacttggacg atgccttcgc ggtcgcgcag gtcgataaaa atcacaccgc cgtggtcgcg
    15901 ccgacggtgt acccagcctt tgacggtaac ggtttggtct aagtattgct cactgatcag
    15961 accgcaatag ttggtacgca taaaatcacc ttttattgat ttaaactgaa aacagaaaat
    16021 gccgtctgaa cggcggcttt attgttgttc gggcaaatcc gccttttcag acggcatagg
    16081 tcctgccaat gttttgacgg gcaggtcgtc agggatgacc atacccagcg aaatcacata
    16141 tttcaacgct tcgtccacgc tcatatcgag ttcgcgcaca tcgcttttct ttaccataat
    16201 atagtaaccg ccggtcggat tcggcgtggt cggaacatac acggaaagat aatcgccgtc
    16261 cttcggcaat gcggccttaa ccgcattcga cacctgaccg gacacgaatg cgattgtcca
    16321 aatacccgat tggggaaacg gcacgagtac tggtgtttta aacgaacggc tgctgtcgga
    16381 cagcaacgat tcggatactt ttttcacact cgaatagatg gacttcacaa ccggaatccg
    16441 ccccaacaag ctgtcccacg cggcaagaat ctgccggccc aatacgtttg cggcaaacaa
    16501 tccggttaca aacaatacgg caatggcaac gataacgccc agccccggga tattaaaccc
    16561 caaaacatat tgcggccgcc attgcttcgg cagcaggttg acgagctgat cggacgcgga
    16621 aacgatatag gaaaccaccc aaaccgttac cgcaatcggc agccagacca aaatgcccgt
    16681 aatcagatat ttttttaacg ccttggcagc tttaccgcct tcggccgcag gttccgtcat
    16741 cttgcttgat tccgacaaag tccgtacaaa ccgcacatta tacgcgtttg cccggattca
    16801 aacgaaattt ttatcccgcc ccgccaaacc gccggcggct tcagacggaa cggcaacttg
    16861 atataccgtc tgaacacgcg gttcagatgc cgtccaagtc gttgaacatc aacccgatac
    16921 cgataccgtt ctgcttgtgg ttgtagtcga tcaggctctc gccgtaaccg tggaatccgc
    16981 gtaccacgcc tttgagtttg cccttaatcg gaaacgtgta ggcggcttca atcgcgccgt
    17041 agcccgtttt ggggttgtag cgcaatacgg aatacacatt ctgcctgtcg ttcaggcggt
    17101 actgcagctt cacgtcgcca taccccatat agtcggcaat atcgggattg tcgtttttat
    17161 cgccgctctg atcgaacgca cgcacccaca cgcgcggaat caccgtcaat ttgccccatt
    17221 ccatgcctgc catggcgtaa atcctgttcc acgaacgcga ttcgggacgg ctctgtccgt
    17281 tggactggtg gacaaaaccc gcaccgagca tacgcagcct gccgccgaac ggcaaatccg
    17341 ccttcacagg ctgggtcagg aaaatttcag gtttgtaatc cgtattgcgg aacggcgcgg
    17401 atttcctgcc ttggttgtaa atctgccaat cggatctttg ggtgtagccg aaccacagat
    17461 ccgcgcgggt tttaaacaaa tcttcggcaa ttttgctttt gaacgaaacc tgcaatttgg
    17521 tttccgcacg tttctgctgt ccgaattttt cctgtacagt cgtaccgcgc gtcggcgaac
    17581 ccggggcata gttgggcgaa ttgttgtacc agagcggcat aaggtacatc ggattgtgtt
    17641 cgcgtacgcc caacagcccg cgcaaatcgt ttttgtccaa gtcgtacatc aggctcaaag
    17701 gcgtatagat gtcggcggtt tcgcccgcac tgtcggcagg aagcgcatcc ccgccttttt
    17761 caacaacaat gaccgcctcg cccttatcca ggctgctgcg gacggtttcc gtcagattga
    17821 gtacggcttt cgactcctgc ccttcctgcc ctgccgaaga cggaagctgt gccgcaaaaa
    17881 tcctgtcgta acacgccaaa cgcgtaacat tgtccgtcaa agcggcgcat tgcagcgcgg
    17941 tctctccaaa agcggatgcc atcggcaaca gtcctgtcaa aagaatatag cgcatattcc
    18001 gtgtattcat ctccgccccc attgtcggca tattggtttt caaacggcat tttatagcgg
    18061 attcggataa aaaaccgcac cctttccgcc atttcggtat ttagcccccg taatacagaa
    18121 aaccccgaaa ccgtcaggct tcagggtttt ccgcttatcg cgtatcaacc gccttggcgg
    18181 ttttgcaaaa atcaagccag tgcttttact tttgcagaca aacggctttt gtggcgagcc
    18241 gctttgtttt tatggaacac gcccttgtcg gcgatgcggt cgatgacttt gacggactct
    18301 tggtaaaccg cttgtgcggc agctttatcg cctgcttcga ctgctttcaa tacttttttc
    18361 actgcagtgc ggaatgcggt acgcaggcta gcgttgtggg cgcgttgttt gacggactgg
    18421 cgggcacgtt tgcgtgcttg tgcgctgttt gccatattgg aatctcctgg aagaaaaata
    18481 aattctgtaa acgcgcaatt ttaaaggggg tttacattat atgcaagcct tttctctcta
    18541 tccgcccgtc ggacaccctg acagcgcaaa aaaacggcaa aatcgtgcgg acgttttccc
    18601 cctcttttga aaacagggta attttttagg gaaatcagtc caatatcact ttgagtttgc
    18661 acaaatttac tttacaatgc ccaaaccttg cgccggggta acgatggggc gcggggattt
    18721 ctttttttcc aacctctttc atcaggaatc tgcccgtatg aaaaaatccg tattagccgt
    18781 tttggccgcg ctgtctctgg cagcctgcgg cggcagcgaa aaaaacgccg tgcaacctca
    18841 agcagacgct gcgtctgctg ccaatgccga agccgctgcc accgatactc tgaacatcta
    18901 caactggtcg aactatgttg acgagagtac ggtcgaagac tttaaaaaag ccaacaatct
    18961 gaagctgact tacgacttgt acgaaaacaa cgaaacgctg gaagccaaaa tgctgaccgg
    19021 caaatccggt tacgatttgg ttgtgccggg catcgccttc ctgccgcgcc aaatcgaggc
    19081 gggcgcgtat caaaaagtca acaaagacct gattcccaac tataaaaaca tcgatcccga
    19141 actcttgaaa atgctggaaa ccgccgaccc gggcaaccag tatgccgtcc cctatttctc
    19201 cggcgtgaac acgattgcga ttacggcgaa aggcaaagag cttttaggcg gcaagctgcc
    19261 cgaaaacggc tgggatttgc tgttcaaacc cgaatacacc cacaagctga aatcctgcgg
    19321 catcgccctg tgggacaccc cgagcgaaat gttcccgatt ttgctgaact acttgggcaa
    19381 agaccccaaa ggctcgaatc ctgaagattt gaaggcggcg gcggaagtgt tgaagtctat
    19441 ccgtccggat gtcaaacgtt tcagcccgtc catcatcgac gagctggcgc gcggcgacat
    19501 ctgcctggcg gcaggcaacg gcggcgattt gaacttggcg aaagcacgtt ccgaagaagt
    19561 gaaaaacaac gtcggcatcg aagtgctgaa tccgaaaggc atgggcttct ggattgagtc
    19621 ttggctgatt cccgccgatg cgaaaaacgt cgccaatgcc cacaaataca tcaactacac
    19681 gctcgacccc gaaatcgcgg cgaaaaacgg catcgccgta accttcgccc ccgccagcaa
    19741 accggcgcgc gaaaaaatgc ctgccgagct ggtgaacacc cgttccatct tcccgaacga
    19801 gcaggatatg aaagacggtt tcgtgatgcc tcaaatgagt acggatgcga aaaaactgtc
    19861 ggtcagcctg tggcagaaaa tcaaagtcgg caccaactga tttgaagcat taaaaatgcc
    19921 gtccgaacat cgttcggacg gcattttata ttggattgaa atagaaatat ttatatagtg
    19981 gattaacaaa aatcaggaca aggcgacaaa gccgcagaca gtacaaatag tacgaaaccg
    20041 attcacttgg tgcttcagca ccttagagaa tcgttctctt tgagctaaag cgaggcaacg
    20101 ccgtactggt ttttgttaat ccactatacc gtcgttccca cggtcaggat ttcagattgc
    20161 ggacatctgt cagaaaagac aaaaaacctt ccgccgtcat tccctacagg cgagaatccg
    20221 atccgttgaa attcggttgt tttaaataaa ttcttgcagc tttgattttc tgtttttccg
    20281 ataacgccgt aactttgaaa cgcgaaagcg gtaatccaat ccgttgggat tttgcaactt
    20341 caaatcaatc cgcaaactga aatcccgtca ttcccgcgca gtcgtgaatc cgaacgcgtc
    20401 cgcacgaaaa cctgcatccc gtcattccca cgcagtcgtg aatccgaacg cgtccgcacg
    20461 gaaacctgca tcccgtcatt cccacgaaag tgggaatcta ggacgtaaaa tctcaagaaa
    20521 ccgttttacc cgataagttt ccgcaccgac agacctggat tcccgcctgc gcgggaatga
    20581 cgaaatttca gcgagccgta gggtgggctg tagggtgggc ttcagcccac caatttcacc
    20641 gtatcaaagg tttttgggaa tacggcggtt tcggttttcg gtgggaatgg gcggaatgga
    20701 taacattgac ggagttgggg gaataggtgg aaacggtggg attggtgggc tgaagcccac
    20761 cctacagcca gccctatgtc cacgctgcac atcctacgcc cgccttgcgt ttcttataag
    20821 cagcatttta cgcaatactt tgcgtccgct gaaaaaattt caaactgtct tttttatcaa
    20881 atgcgaaaaa tataacgtca ttcccgcgca ggtgggaatc tagtctgtcg gtgcggaaac
    20941 ttatcggata aaacggtttc tttagatttt acgccctaga ttcccgcctg cgcgggaatg
    21001 acgggatttt agatttctgt ttttgatttt ccgctttcga gaaaatgacg gtttagagtt
    21061 acccgaaacc tcaaaaaaac cgaaaccgaa cggactggat tcccgcctgc tcgggaatga
    21121 cggatttcag gattacggtg tatcggggat gatgggaaac ggtggggttg tgtaaaaaat
    21181 gccgtctgaa gcctttcaga cggcatttgc ggcgtttgga cgtttaaaac ttcatttcca
    21241 agctaaatgt gtagtttcgg ccgggggcgg catatcggtt gtaaacgccg acatttttgt
    21301 gttgattgac tgcgccgccg acagtttgcc gcacattttc ccaagtaaca tagcggtagt
    21361 tgaggaggtt gtacacgccc gcacggaggg tgaagtgttt tttaatcgtg taataaccgg
    21421 acacgtccac aatataccaa gggcgggtac ggcgcgcggt ggcttttgta ttgcggctgt
    21481 tgccgttgag caaagcccgg ctgcccaaca actctgtgat ttccttggct ttggaataag
    21541 tcagcatacc gttcacaccc catttgcctt ccggttggtc atagcccaag ccgacgacat
    21601 agcgcgaggg ttggatggca tcaaacaggt gtgattgaat atcggtgcgg tctgcgcgtt
    21661 ttttgatgtc gcggacatgg acacgattat aggcaaatgt agaataccaa ccttcgggca
    21721 atttatccca tacgccgttc caatcgattt tgcccaaaat attgatgccg gtaatccgcg
    21781 cgctttgggc attgaggtaa gccgggtcgc ctttggcttc ttctttgccg tttttaattt
    21841 gcgcttcata accccggaca atcaaatcgc ggtaggcatt attgaaccaa cttgcctcca
    21901 agttgccgaa atcgccttta aacacgatgc cggcttcttt gttgaacgat ttttccggat
    21961 cgattttgac cgccttgctt tgaacacccg cccgccagcc gtacatttcc gcaaacgagg
    22021 gcaggcggaa gccggttgaa gtgcggtaag tcaaatccag ccagtcggca ggtttgagga
    22081 cgatgccggc gttccaggac agggtacggt gcgtgccggt ggaaacgctg ccgtcgtccg
    22141 aatgcgtact gcggtagtcg tagcgcaacc ccgcgccgac atccgcccac ctgcccaaac
    22201 ggacattgtc ccgaactgcc gcgtaatagc ttttgccgtt gatgctgcgc ggcgtacagt
    22261 ccgtataagt attattgccc aagcggcaga tttgctccgt aaccacattt cccccgccta
    22321 tgctgaccca atagggtttt tccttgctgc cgttggggct gatgttttta ttgccgtttt
    22381 tagggggcgt tttcgacgaa taggcgcggt tggcactttg atgataataa tcctgatggc
    22441 ggagattaga gccaaagcgg tcaaacccga gattcacgct caggttgtgg cggattttgg
    22501 cggtatcgaa ggattttttg aatgccgcct gcaagagcct gtggctttcc ccgtaaatca
    22561 cgcggtcgga tttgtagtag gaaaacggct tgtcggcact cggacggcaa tatttgtccg
    22621 aaccgtcggc agaacagtgc gtctgctgaa aatgattgtc caaaccgatg ccctgacggt
    22681 cgtaagagag gcgggcataa tccgcccaag tgtctttatc ggcattggta tagacatatt
    22741 ccaaaccgta gcggcttttg gtgtgcgtct cgtcgtaaaa cacgcccgta ccgtattccg
    22801 cgcccaccag cgcaccgttt tcaccgttgg taaacagacc gccgtatttg tggttgccca
    22861 cgtatttgcc gttaccgggc aaagaacccg cctgttttga atttgcatca aaaaccgcct
    22921 tggtcaggaa tgccggaacc gtcatatcgc gcgtgtcgaa agtttgttgc gtgtgttcga
    22981 gtatgccgcc gatgtagtgc cgtttgtttt caaaacgaaa acccgggcgg aacaaccacg
    23041 accggctttc gtatgaaagc ggatcggcga ggaagcggtt gggacccgtg tagtctcggg
    23101 tagaaaccgt ttgacgttcg tctttgccga caacatcttt tttcggtttg tctttacaag
    23161 ccgcatatcc attagggcat tcttcttcga ccacgaaatg agcgtactga ttggtatcct
    23221 caaccggcac cagcctgtta aagctctgaa cgccgcgtcc tgcatcttcg tgggcgcgga
    23281 tttcccccgc gcgccgcccg gtgtggatca gcaaagcctc cgcaccgccg atgcgccccg
    23341 ccagcgcgat ggattgggta agcccccggt ttttgccgga ataggcggtt ttactctgaa
    23401 tgccccactg cctgccttcc ccgataacat cgtcggcggt tttggtttga aatgcgaccg
    23461 agcccgccaa tgcgccgctg ccttgttcga ccgagtttga gcctttgctg atttcgacag
    23521 ctttgacgtt ttcatactcg atttcattga ttgcgccgct gctgcccgcc gtcctcgtcc
    23581 cgcccaatgc cgcctgcgcg gtgtaggact gtatttgcga aacgccgtcc accgttaagg
    23641 aaacgcggtt tttatccatg ccgcgtattg aatagccgga acttgcgccc cgaccctgtt
    23701 cgaccacggc aatacccgga tcataacggg tcaggtctcg gatattcaaa acctgttctt
    23761 tacttagcgt atcggaagac ttgaccaact tgcccagccc ggttacttcg ttatcgcggc
    23821 gggttttctg ttttttggct tttacctgta tggtatccaa ctgtttttcc tgtgcttgtc
    23881 cggcttgcac attttctgca taagcgggca gcgcagtcat taaagacagg cataaaatat
    23941 tgaatcggaa caaatgttgc tgttgcatag tgtttcccta atcttcgctt tcagacggca
    24001 tcggaaggag cggtgccgtc tgaggcctta ttcttgattg ttcggcagcc gtgcttatcg
    24061 cacaggctgt tggcgtttcg caccgaatac gacagttgca ctgctattgc cggatgcatt
    24121 tgttgcattt ttcgtttgtt tatcgcccgg ataggcaaac catccgccca actcttcggc
    24181 tttgggcccg taaaaaccgc cctgcacctt ggcatctgtg atatatgcct taggcgtgcg
    24241 ggtggtattg ctttgatcga gatcaaaacc tgactcagca gttttcgccg taccttcaaa
    24301 gccgttgtcc ttaatattac catcaatggt aaaggttgcc tcctgcctgt tgtcagcggt
    24361 taacgtacca gtaatttttt tatcggcaaa attcacagta aattccgccc tgttgccact
    24421 cgttgcattg gaagcattgc cgctccagct tgtgcttttg tcgttggcaa tatatccgta
    24481 ccaagacccc cgataaacga tgttttgctc gcttggaatc tctttttcat cggtgcgctc
    24541 gccttggagg aacatacttt gttcaacttg ttccgtttta gcatcagctt gactactgct
    24601 ttctcctgcc tgcatcgcgg acttgctgtt tttgcgcgtc aacattccgt atttcagata
    24661 attgaggttg gaacagcaga cttcgacttc ataggttttt gttttgccat tggtatcacc
    24721 tgccgtattt gaagcggttt gcgccccatt cgtctgcgta cctgcttggg cgtctttttt
    24781 atcactttcc ggcgtgtggt caaatttgcg ggtaaaggct gttccgccat ttgtaccttg
    24841 attggcttga ttgttcccac tttcggaagc ctcgggcaag agcggaatca taatgccgtc
    24901 gacaaccagt tgggcggcgt tgctgaagtt gtcgagcttt tggacttcct tatcgcccaa
    24961 tttcagctcg accgcatcca aaaccgtggt cagcttactg ttttcagacg acgtgcctgc
    25021 cgcaccgttt gatgctgccg catctgtgcc gcctgaagcc accgcgccat tttccgtttt
    25081 gtctttggtt ttcgcgctgc cgacaaccgc aactttttta tcgtcgctca aaaagcggaa
    25141 acccaattcc tcacccttcg gaccgaaaaa gccgccgctc aaagaagacg agtcggaaac
    25201 aaagggatgt agtttggttc ctccagtgtc gggtttgtcg gtcgctatcg ccttaccgtt
    25261 gaagcggttg cctgttattt gggcatcaag gctgtagtat tgggtggtgt atttatcgtt
    25321 agtagtagcg tttgtaactc tattattgcg tattaattta cccgtcaatt ttttactgcc
    25381 gaaatccact tctaaattcg aggtaaaacc ataaccctcg tgcttatcat taaggttgga
    25441 atcagttcta ttggaagttg tttcgccgtc atcgcccgaa aatccgctgt atctgtcgcc
    25501 ttgccctttt gaggtttcaa gaatatcgtt aaatttttgt cccttttcag tatcggttac
    25561 aaaatgccat acgcctttgt agataacttt ttcagaagtg ggaagttgtc gggaagggtc
    25621 tttaccgtga taaaaaatat agccgtcgtc gcctgactta aatttgattt tactgaattc
    25681 tctttcactc tctgcatgtt tataaaacca gccggaataa acatatttga aatttttgta
    25741 atcttttact tcgttttttg gttggtttgc accgctatta gtgctgccgt tttgatggtt
    25801 tgattgcgtg agataagggg aagtgtaaat attgctgcca tcgtctgttt ttactttatc
    25861 aataaccgat tgctgtcgct cgggtaagtt ttggggcttg ctcggcaatc ctgtctcctc
    25921 ccaatcattt gggtttagtt caactttgtc ttcttttgcc tgcggatgcc gattcctccg
    25981 tttcaacctc atcgcaaaac cgtatccgcc ttggtctttt tgggcttgcg gtttttcgga
    26041 agaaacatct tgatattttg gcgcgggacg cggggcttcg gtatcgacag aatcaagatc
    26101 gaaactgccg cctccgccca aacaagcact caacaaaaac acaggcagca ccatagcagc
    26161 ctgatttacc aatggattgt tcatataaac ccaattcaat taaagaatga taaggattat
    26221 tattttattt atttttaaca aatttgcaaa tactttttta tttttttagg gaatacacca
    26281 aaatcccgtc attcccgcgc agtcgtgaat ccgaacgcgt ccgcacggaa acctatatcc
    26341 cgtcattccc acgtatatc
//
LOCUS       DAWGKF010000010        25374 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.010, whole genome shotgun sequence.
ACCESSION   DAWGKF010000010 DAWGKF010000000
VERSION     DAWGKF010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 25374)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25374)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25374
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.010"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(127..1437)
                     /locus_tag="WHR07_000281"
     CDS             complement(127..1437)
                     /locus_tag="WHR07_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HEZ2129552.1"
                     /translation="MTDLFAREPDAPLAERLRPHTLDDVVGQEHLIGEGKPLRVAVEG
                     GKPHSMLLWGPPGVGKTTLARILAQSFNAQFLPVSAVFSGVKDIREAIDKAEIALQQG
                     RATILFVDEVHRFNKAQQDAFLPHVESGLLTFIGATTENPSFEVNPALLSRAQVYVLQ
                     PLSSDDLKKLIAKVLALPEYQEFTIETDAQKLLVNTADGDARRLLNLLEQLLRAADTR
                     RLKNLTAEFLADSLGAQIRRFDKGGESFYNQISALHKSVRGSHPNAALYWFCRMLDGG
                     TDPRYLARRIVRIAWEDIGLADPRAFQIANDAAATFERLGSPEGELALAQAVLYLAAA
                     AKSNAGYKAYKQMRRFVAENSSDEVPVHLRNAPTKLMKELGYGREYRYAHDEPNAYAA
                     GESYMPDGLDEPDFYQPVPRGLEIKIGEKLEWLKSLDEEVLKAK"
     gene            1749..2171
                     /locus_tag="WHR07_000282"
     CDS             1749..2171
                     /locus_tag="WHR07_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129553.1"
                     /translation="MEWVSLFSDPQRDDDSLITLKDEKITVKNYIVPWWKKGENFRKL
                     ELITTGKNDNGNLTVNGIYGIQSFADSQLGYTPELLVKSNNDILFKNNLQSVDVKPHS
                     GNIHLDAKGKIQFNLNVPDVDGVQDVASGKKYRQTIVP"
     gene            2257..2754
                     /locus_tag="WHR07_000283"
     CDS             2257..2754
                     /locus_tag="WHR07_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter"
                     /protein_id="HEZ2129554.1"
                     /translation="MNVKVHKDTHHFGIHNLNNTDVHLTAEDSDNVIEIKGELADLMP
                     TGNVESTSFLRGIETAFKSNTVLTGNNNKISIATEGKGLGLGVNGLQSNSPYSGRTTG
                     IFINNQSSDLTQPSLDGISTIKLKAVKGNNEVDLNVKNHASVKGIIASHSAKATLEAE
                     GDNIV"
     gene            2863..2946
                     /locus_tag="WHR07_000284"
                     /pseudo
     CDS             2863..2946
                     /locus_tag="WHR07_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248742.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter"
     gene            complement(3039..3103)
                     /locus_tag="WHR07_000285"
                     /pseudo
     CDS             complement(3039..3103)
                     /locus_tag="WHR07_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(3222..4136)
                     /locus_tag="WHR07_000286"
     CDS             complement(3222..4136)
                     /locus_tag="WHR07_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEZ2129555.1"
                     /translation="MDAVQLKSFVAVAHEGNLTQAAKRLFLSQPAVSAQIKALEEYVG
                     TPLFRRTGKGMVLTRAGEILLPEAESLLQYKHKLEHFAKTLAGNYSEETSLGIIHPID
                     SAKLVALTDNIGQTAPKTRLHIQYGMSGEILSRIQHKTLHGGFILGNAAQRGIRSVFL
                     QNLTYALICPQSQYPHLTRSLPQSLQECVWIEMSGVSGSRKHLHQFWRSNRLSPKKQI
                     LCDYPQTIIDLVAGGIGVAMVPGNKAEAAAKEGAGVAIIESCRHSMPLNFIYAEEYED
                     NPHVSLLLECIEKVWGVQAVQPPVVSDN"
     gene            4392..5861
                     /locus_tag="WHR07_000287"
     CDS             4392..5861
                     /locus_tag="WHR07_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3360 family protein"
                     /protein_id="HEZ2129556.1"
                     /translation="MEKHNGTYRDLHRPASEFATRDEYLEHELQIMQPKRWRPNLPFR
                     DYRFEWEDLIPAMAGTIGKVVMVGAVAAAFAAPLGLPDSFVLENVRYELLIAAAFILL
                     VSGFFLPGANLPGTHGPLIPMIPIVVSAGGHPLAFGISIAVLGLLMALFRGGSIMAKL
                     TSNGVCGGLLLYLGFIGTTGQVKKLFSWASGFNMPYIAFTVIIVTIVMYALLEHWKKR
                     WLAVPLGCLIAGVVAFALGAPFEFHTAPGLPPMSPAYWWGENSGWHLGLPTAESFLVV
                     FPFAVLAVAMWSPDFLGHQVFQKISYPEKTDKVLMNIDDTMTSCSVRQAVGSILGGAN
                     FTSSWGTYIVPASIAKRPIPGGAVLTAVLCIIAGLWGYPMDLAIWQPVLSVALVVGVY
                     LPLLEAGMEMTRKGKTTQSAAIVVFSSALVNPVFGWALTMLLDNLGLIGCKERSAQLG
                     FAGRVLIPAVGFLILCVAMGAVGMLPGIPPFLEHFKSLG"
     gene            6113..6484
                     /locus_tag="WHR07_000288"
     CDS             6113..6484
                     /locus_tag="WHR07_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129557.1"
                     /translation="MNKTLSILPVAILLGGCAAGGGNTFGSLDGGTGMGGSIVKMAVG
                     SQCRAELDKRSEWRLTALAMSAEKQAEWENKICACVAQEAPERMIGNDVMQMLDPSTR
                     NQALAALTAKTVSACFKHLYR"
     gene            6557..7966
                     /locus_tag="WHR07_000289"
     CDS             6557..7966
                     /locus_tag="WHR07_000289"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEZ2129558.1"
                     /translation="MKYISTRGETAHKPFSEVLLMGLAPDGGLMLPEHYPQIGREALD
                     KWRGLAYPELAFEIMRLFVTDIPEDDLRDILNRTYTEAAFGTKEITPVRTLSDGIKIQ
                     ALSNGPTLAFKDMAMQFLGNAFEYVLNKEGKKLNILGATSGDTGSAAEYALRGKKGVN
                     VFMLSPDGKMSAFQRAQMYSLQDGNIHNIAVKGMFDDCQDIVKAVQNDAAFKEKYHIG
                     TVNSINWGRIVAQVVYYFAGYFKATQSNDEQVSFCVPSGNFGNVCAGHIAKQMGLPIR
                     RLIVATNENDVLDEFFKTGAYRPRNSAHTYVTSSPSMDISKASNFERFVFDLMDRDPQ
                     EINTLWTEVAAGKGFDLQFALDKVGGKYGFTSSKSTHADRLATIKQVYEQDQELIDPH
                     TADGVKVAREVREEGETVVCLETALAAKFDATIREAVGDAAIPRPAALEGLENLPQRV
                     QTVPNSADAVKGIIEQTLA"
     gene            8012..8806
                     /locus_tag="WHR07_000290"
     CDS             8012..8806
                     /locus_tag="WHR07_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129559.1"
                     /translation="MTLPMQETRFSILLDELAAKQKAAIAPHLLADGSKVWIRKAGRH
                     NARWRYALLGMVARYLKLGVLKPVPSLGGEPAIATESKRLYELRAARIAVPELLAVRK
                     NALMFGNLEGIPLDTQIRQEAEAGKADAWLAGLEAIARVHKKQQFLSQAFARNMMSDG
                     KNISFLDFEDDPSEVLTIAQCQARDWLCYIHSTALILKNGGLLEAAAEKWGGVLSDQP
                     AEIQKLIAATVKPILPIRRLEHPRWGRDALRLAASISLISLADMPP"
     gene            8994..9770
                     /locus_tag="WHR07_000291"
     CDS             8994..9770
                     /locus_tag="WHR07_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HEZ2129560.1"
                     /translation="MAAFNTQKVLSVHHWTDAYFTFTCTRDESLRFENGQFVMVGLMV
                     DGKPLMRAYSVASANWEEHLEFFSIKVQDGPLTSRLQHLKVGDDVLISKKPTGTLVAG
                     DLNPGKHLYLLSTGTGIAPFLSITKDPEIYEQFEKIILVHGVRYKKDLAYYDRFTKEL
                     PEHEYLGDLVKEKLIYYPIVSREEFEHHGRLTDLMVSGKLFEDIGLPKINPQDDRAML
                     CGSPAMLKDTCKVLDDFGLTVSPKTGVRGDYLIERAFVDQ"
     gene            complement(10438..12909)
                     /locus_tag="WHR07_000292"
     CDS             complement(10438..12909)
                     /locus_tag="WHR07_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEZ2129561.1"
                     /translation="MKKTCFHCGLDVPEHLHLTVRYENEDRETCCAGCQAVAQSIIDA
                     GLGSYYKQRTADAQKTELPPQEILDQIRLYDLPEVQSDFVETHGGTREAVLMLGGITC
                     AACVWLIEQQLLRTDGIVRIDLNYSTHRCRVVWDDGKIRLSDILLKIRQIGYTAAPYD
                     AQKIEAANQKERKQYIVRLAVAGLGMMQTMMFALPTYLYGGDIEPDFLQILHWGGFLM
                     VLPVVFYCAVPFYQGALRDLKNLRAGMDTPIAVAIIMTFIAGVYSLATNAGQGMYFES
                     IAMLLFFLLGGRFMEHIARRKAGDAAERLVKLIPAFCHRMPGYPAVQDVREAAVVKLQ
                     AGDVVLVKPGETIPVDGTVLEGSSAVNESMLTGESLPVAKMPSEKVTAGTLNTQSPLI
                     IRTDRTGGGTRLSHIVRLLDRALAQKPRTAELAEQYASSFIFGELLLAVPVFIGWTLY
                     ADAHTALWITVALLVITCPCALSLATPTALAASTGTLAREGILIGGKQAIETLAQTTD
                     IIFDKTGTLTQGKPAVRRISLLRGTDEAFVLAVAQALEQQSEHPLARAILNCRISDGS
                     VPDIAIKQRLNRIGEGVGAQLTVNGETQVWALGRASYVAEISGKEPQTEGGGSAVYLG
                     SQSGFQAVFYLTDPLKDSAAEAVRQLAGKNLTLHILSGDRETAVAETARALGVAHYRA
                     QAMPEDKLEYVKALQKEGKKVLMIGDGINDAPVLAQADVSAAAAGGTDIARDGADIVL
                     LNEDLRTVAHLLDQARRTRHIIRQNLIWAGAYNIIAVPLAVLGYVQPWIAALGMSFSS
                     LAVLGNALRLHKRGKMQSEKMPSEQ"
     gene            complement(12906..14084)
                     /gene="hflX"
                     /locus_tag="WHR07_000293"
     CDS             complement(12906..14084)
                     /gene="hflX"
                     /locus_tag="WHR07_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009347253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEZ2129562.1"
                     /translation="MTGRTGGNGSTQAQPERVMLVGVMLDKDGTGSSATRLNGFQTAL
                     AEAVELVKAAGGDSVRVETAKRDRPHTALFVGTGKAAELSEAVAADGIDLVVFNHELT
                     PTQERNLEKELKCRVLDRVGLILAIFARRARTQEGRLQVELAQLSHLAGRLIRGYGHL
                     QSQRGGIGMKGPGETKLETDRRLIAHRINALKKQLVNLKKQRALRRKPRESGTIKTFA
                     LVGYTNVGKSSLFNRLTKSGIYAKDQLFATLDTTARRLYISPECSIILTDTVGFVSDL
                     PHKLISAFSATLEETAQADVLLHVVDAAAPNSGQQIEDVENVLQEIHAGDIPCIKVYN
                     KTDLLPSEEQNTGIWRDAAGKIATVRISVAENTGIDALREAIAEYCATAPNTDETEMP
                     "
     gene            complement(14089..15369)
                     /locus_tag="WHR07_000294"
     CDS             complement(14089..15369)
                     /locus_tag="WHR07_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEZ2129563.1"
                     /translation="MKSLFIRLLLLGSAAGVFYHTQNQSLPAGELVYPSAPQIRDGGD
                     ALHYLNRIRAQIGLHKLAHAPVLENSARRHARYLTLNPEDGHGEHHPDNPHYTAQKLT
                     ERTRLAGYLYNGVHENISTEEEAAESSDSDIRTQQRQVDGLMSAIYHRLSLLDRHTDE
                     AGAAFVRENGKTVLVFNQGNSRFERHCAQGRNQPEAGRKYYRNACHNGAVVYTDEAMP
                     AQELLYTAYPVGSGALPYFHGERPDPVPEYEITGNPASIDFSEAAGKITMKSFKLYQG
                     KNEIRPVRVLTAGNDPNGRLTAYQFALFPLKPLEYGTLYTAVFDYVRNGRRAQAKWQF
                     RTRKPDYPYFEVNGGETLAVRKGEKYFIHWRGRWCLEACTRYTYRQRPGSRLSIGRHE
                     AGGIVFSVDGMAGSRITLAPEGETERGVTLYLQD"
     gene            complement(15522..16247)
                     /locus_tag="WHR07_000295"
     CDS             complement(15522..16247)
                     /locus_tag="WHR07_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HEZ2129564.1"
                     /translation="METQNKPTVTDIDRPILVPPGGHKKVLLHSCCAPCSGEVMEAML
                     ASGIDYTIYFYNPNIHPHKEYMLRKEENVRFAEKFGIPFIDKDDDYENDRKEWFAKAK
                     GMEFEPERGIRCTMCFDMRFEKAAQYAHEHGFPVFTSSLGISRWKNMAQINDCGHRAA
                     APYDDVVYWDFNWRKGGGSARMIEISKRENFYQQEYCGCAYSLRDSNAHRKSQGRISI
                     KLGVLYYGDESTQYEPAPIRVDK"
     gene            complement(16320..16997)
                     /gene="radC"
                     /locus_tag="WHR07_000296"
     CDS             complement(16320..16997)
                     /gene="radC"
                     /locus_tag="WHR07_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEZ2129565.1"
                     /translation="MSIKQWPEGERPREKLLERGAAALSDAELLAILLRVGTRGMSAV
                     DLARYLLQEFGSLGRLMSAEVGKLSAYKGMGTASFTQFAVVREIGRRILAEELQESIV
                     LSDPDTVADYLRFHLGQEKVEVSVALLLNRQNQLIAVRELSRGTVAENTIYIREIVKL
                     ALDEYADSLIIAHNHPGGSPEPSQEDIMFTRRLAQAMSLVDVSLLDHFIVTSQSVRSF
                     RQLGLMP"
     gene            complement(17120..18469)
                     /gene="gshA"
                     /locus_tag="WHR07_000297"
     CDS             complement(17120..18469)
                     /gene="gshA"
                     /locus_tag="WHR07_000297"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HEZ2129566.1"
                     /translation="MKLPVMSPEHSAQLQAFEAKILSNHAKIEAWFRTQWSVHRPPFY
                     GSVDIRNAGYKISSIDMNLFPGGFNNLNPNFIPLAAVAAQDAVQRACETAKSVLIIPE
                     NHTRNTFYLQNVYALGEILCSAGYEVRLGSLNPEVTEPTEFETALGDKILLEPLLRTR
                     DRVHLADGFSPCVVLLNNDLSAGIPDILKGISQTVLPPLHGGWTTRRKTNHFGAYNQV
                     AAEFAKLIGIDEWQINPYFEKIGGLDFQGREGEDALAEAVERVLAKIQAKYDESGITD
                     KPFVIVKADAGTYGMGVMSVKSADEVRGLNRKNRNKMAKVKEGLEVSEVIVQEGIYTY
                     ETLNSAVCEPVVYMMDRFVIGGFFRVHEGRGADENLNAGGMVFVPLSNSIPTGNGDNS
                     QEAPEACKRVFEQWDSLGMPRSEKDCDVDNEHNRLYVYGVMARLSLLAASIELEETA"
     gene            18729..20138
                     /gene="leuC"
                     /locus_tag="WHR07_000298"
     CDS             18729..20138
                     /gene="leuC"
                     /locus_tag="WHR07_000298"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEZ2129567.1"
                     /translation="MTAQTLYDKLWNSHVVREEEDGTVLLYIDRHLVHEVTSPQAFEG
                     LKMAGRKLWRIDSVVSTADHNTPTGDWDKGIQDPISKLQVDTLDKNIKEFGALAYFPF
                     MDKGQGIVHVMGPEQGATLPGITVVCGDSHTSTHGAFGALAHGIGTSEVEHTMATQCI
                     TAKKSKSMLIAVDGKLKAGVTAKDVALYIIGQIGTAGGTGYAVEFGGEAIRSLSMEGR
                     MTLCNMAIEAGARSGMVAVDQTTIDYVKDKPFAPEGEAWDKAVEYWRTLVSDEGAVFD
                     KEYRFNAEDIEPQVTWGTSPEMVLDISSKVPNPAEETDPVKRSGMERALEYMGLEAGT
                     PLNEIPVDIVFIGSCTNSRIEDLREAAAIAKDRKKAANVQRVLIVPGSGLVKEQAEKE
                     GLDKIFIEAGFEWREPGCSMCLAMNADRLTPGQRCASTSNRNFEGRQGNGGRTHLVSP
                     AMAAAAAVTGRFTDIRMMA"
     gene            20235..20489
                     /locus_tag="WHR07_000299"
     CDS             20235..20489
                     /locus_tag="WHR07_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129568.1"
                     /translation="MNKLFITALSALALSACAGTWEGAKQDTARNLDKTQAAAERAAE
                     QTGNAVEKGWDKTKEAVKKGGNAVGRGISHLGGKIENATE"
     gene            20551..21192
                     /gene="leuD"
                     /locus_tag="WHR07_000300"
     CDS             20551..21192
                     /gene="leuD"
                     /locus_tag="WHR07_000300"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HEZ2129569.1"
                     /translation="MKAFTKITAIVAPLDRSNVDTDAIIPKQFLKSIKRSGFGPNAFD
                     EWRYLDHGEPGMDNSKRPLNPDFSLNQPRYQGAQILLTRKNFGCGSSREHAPWALDDY
                     GFRAVIAPSFADIFFNNCYKNGLLPIVLTEEQVDRLFKEVEANEGYQLSIDLAEQTLT
                     TPGGETFTFDITEHRKHCLLNGLDEIGLTLQHADEIHAFEEKRRQSQPWLFNG"
     gene            21362..21734
                     /gene="dcm"
                     /locus_tag="WHR07_000301"
                     /pseudo
     CDS             21362..21734
                     /gene="dcm"
                     /locus_tag="WHR07_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246222.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
     gene            21787..22182
                     /locus_tag="WHR07_000302"
     CDS             21787..22182
                     /locus_tag="WHR07_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HEZ2129570.1"
                     /translation="METLEALGYYVSWKVLNAKDFGIPQNRKRIYLTGSLKSKPDLSF
                     ETSPSPKLKNILESGLPTESSPFIKKLLKKFPPSELYGKSVKDKRGGKNNIHSWDIEL
                     KGAVTEEEKQLLNILLKEQRKKNGLQKSA"
     gene            22197..22631
                     /locus_tag="WHR07_000303"
     CDS             22197..22631
                     /locus_tag="WHR07_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HEZ2129571.1"
                     /translation="MPLTKAQISTFYKHPDLQNILDSLTDKGYLVLEHPKQKIGGQRI
                     KDESLPKGYNIVSGKKSFEINKILDPNDVAPTLVAMDMEHLFVVDNGGLRTLTGKEGL
                     RLFGYPDDYSFDIPKKDRCDLLGNTVAVPVIKAVSERLLHTL"
     gene            22647..22808
                     /locus_tag="WHR07_000304"
     CDS             22647..22808
                     /locus_tag="WHR07_000304"
                     /inference="COORDINATES: protein motif:HMM:NF021105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NgoBV family restriction endonuclease"
                     /protein_id="HEZ2129572.1"
                     /translation="MIKLTAQQIFDKLLDEEKILSANGQIRFFLGDVDIIVKQKDVVG
                     NIIQEWLGG"
     gene            22809..23378
                     /locus_tag="WHR07_000305"
     CDS             22809..23378
                     /locus_tag="WHR07_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NgoBV family restriction endonuclease"
                     /protein_id="HEZ2129573.1"
                     /translation="MRKREIEFDVSTNTQMPPDFFLNKKDRSRELLEVKAFNRNTGPG
                     FDIADFKMYSDEIIHKPYMLDVDYLIFGYDMDDNGNVTIKDLWLKKVWQITRSMDGWA
                     INLQVKKGVVHKIRPGVWYSINKKNMPMFECLEDFVSAIEETVYQNPATRHNASLWKK
                     KFEEAYKKHYNRSISIPRWHEIAHKYKKK"
     gene            23412..24482
                     /gene="leuB"
                     /locus_tag="WHR07_000306"
     CDS             23412..24482
                     /gene="leuB"
                     /locus_tag="WHR07_000306"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HEZ2129574.1"
                     /translation="MTKHIAILRGDGIGPEIVAETVRVLDKLIAQGLDAGYEYAPLGG
                     EAYDEYGHPYPEFTQNLCRKADAVLLGAVGSPQYDNLDRPLRPERGLLAIRKDLNLFA
                     NLRPAVLYPELANASTLKPEIVAGLDILIVRELTGDIYFGEPRGIRVLENGEREGYNT
                     MKYSESEIRRIAHVAFQSAQKRSKKVCSVGKANVLETTELWREIFEEIGKQYPDVELS
                     HMYVDNAAMQLVRAPKQFDVIATGNIFGDILSDEASMLTGSIGMLPSASLDENGKGLY
                     EPSHGSAPDIAGQNKANPLATILSLAMLLRYSLNDEARAQQVENAVQKVLQQGLRTSD
                     IYEEGTKLVSCSEMGDAVLAAL"
     gene            24645..25208
                     /locus_tag="WHR07_000307"
     CDS             24645..25208
                     /locus_tag="WHR07_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HEZ2129575.1"
                     /translation="MKKIIFAALAAAAVGTASAATYKVDEYHANARFAIDHFNTSTNV
                     GGFYGLTGSVEFDQAKRDGKIDITIPVANLQSGSQHFTDHLKSADIFDAAQYPDIRFV
                     STKFNFNGKKLVSVDGNLTMHGKTAPVKLKAEKFNCYQRPMEKTEVCGGDFSTTIDRT
                     KWGVDYLVNVGMTKSVRIDIQIEAAKQ"
BASE COUNT         6224 a         6590 c         6524 g         6036 t
ORIGIN      
        1 ttaatccact ataccacgtt gtctttattg gctttatcaa taaacaggat aagacctgaa
       61 aaaaagccga tacgcctttt tggtgtaccg gctttgccat actgttctgc ttcagacagc
      121 attgcttcat tttgccttta atacttcttc gtccagcgat ttcaaccatt ccagcttttc
      181 gccgattttg atttccaacc cgcgcgggac gggttggtag aagtccggtt cgtccaagcc
      241 gtcgggcata tagctttcgc cggcggcgta ggcgttcggt tcgtcgtggg cgtagcggta
      301 ttcgcgtccg tagcccaatt ccttcattaa cttggtcggg gcgttgcgaa gatggacagg
      361 cacttcgtcg ctgctgtttt ctgcaacaaa tcggcgcatt tgtttatacg ctttgtagcc
      421 cgcgttggat ttcgcggcgg cggcaaggta caataccgct tgcgccaaag ccagttcgcc
      481 ttcgggcgag cctaagcgtt cgaaggtggc ggcggcatcg ttggcgattt ggaaggcgcg
      541 cgggtcggca agcccgatgt cttcccaagc gatacgcacg atgcggcggg cgaggtagcg
      601 cgggtcggtg ccgccgtcga gcatacggca gaaccaatac agcgcggcgt tcggatgcga
      661 accgcgcacg gatttgtgca gggcggagat ttggttgtag aaactctcgc cgcctttgtc
      721 gaaacggcgg atttgcgccc cgagactgtc ggcgagaaat tcggcggtta agtttttcag
      781 acgacgtgta tcggcggcgc gtaaaagttg ttccaacaaa ttcaacaatc tgcgcgcatc
      841 accgtcggcg gtattcacga gtaatttttg cgcatccgtt tcaatcgtaa actcttggta
      901 ttcaggcaaa gccaatacct tggcaatcag ctttttcagg tcgtctgaag acaagggttg
      961 caaaacatac acctgagcgc ggctcaacag cgcgggattg acttcaaacg acggattttc
     1021 cgtcgtcgca ccaataaagg ttagcaaacc gctttcgaca tgcggcaaaa acgcgtcctg
     1081 ctgcgccttg ttgaagcggt ggacttcatc gacaaacaaa atcgtcgcgc gtccctgctg
     1141 caaagcgatt tcggctttat cgattgcctc gcggatgtcc ttcacgccgg aaaatacggc
     1201 ggaaacaggc aaaaactggg cgttgaaact ctgcgccaaa atccgcgcca acgtcgtctt
     1261 gcccacgccc ggcggccccc acagcaacat agaatgcggc ttgccgcctt ctaccgccac
     1321 gcgcaaaggt ttaccttcgc cgatgaggtg ttcctgcccc accacgtcgt caagcgtatg
     1381 cggacgcaat cgttcggcaa gcggcgcgtc gggttctcgg gcaaacaaat cggtcataac
     1441 ggctccgtca acaggttttc aaacaatatg attatacggc agggaacggc ggcgtgccgc
     1501 atacggattc cgcccctccg tttgccttaa gccgatatta ggcgcatact ggaaaagacg
     1561 agagacttca cacaatatat ccggcacgga gaccgattcc gcatcggcat gacaataccc
     1621 aaatcagcgt ttcaattaaa cattaaggag actaaaatag aaaatttgct ttatctacca
     1681 ttgctttgtt gattcaatcg gcattatgtt ttgaggcgga agcccatgaa tatactaata
     1741 ttcaagagat ggaatgggtg tctttatttt ctgatccgca aagagacgat gatagtctta
     1801 taacccttaa agatgaaaaa atcactgtaa aaaactatat tgtgccttgg tggaaaaaag
     1861 gtgaaaactt tagaaaatta gaacttatta ccactggtaa aaatgataat ggaaatttaa
     1921 cggtaaatgg aatttacggc atccaatctt ttgcagactc tcaattggga tatacgcctg
     1981 aattattggt aaaaagcaat aatgatattc tatttaaaaa taatctccaa tctgttgacg
     2041 tgaaacccca ttccggaaat atccatttgg atgccaaagg aaaaattcaa tttaatttga
     2101 atgttcccga tgttgatggg gtacaagatg tagccagtgg aaaaaaatac cgacaaacaa
     2161 tagtgcctta gtgcggtatg tcaacactat cagccccccg atgaaaatga caaaggcagc
     2221 atatcctttc attcaaaaac aggcaatttg ttcaatatga acgttaaagt tcataaagac
     2281 acacaccatt tcggtattca caacctcaac aataccgatg ttcatctgac tgccgaagac
     2341 agcgataatg tgattgagat taaaggggaa ctcgccgacc ttatgccgac aggaaatgtt
     2401 gagagtacaa gttttttaag gggcattgaa acggctttta aatccaatac cgtattaacg
     2461 gggaataaca ataaaatatc catcgccact gagggcaagg gcttgggatt gggcgtaaat
     2521 ggtctccagt ccaactcccc ctattccgga cgcacgacgg gcattttcat caataatcaa
     2581 tcaagcgacc ttacccaacc ttcccttgat ggcatcagca ctatcaagct caaagccgtc
     2641 aagggaaata atgaagttga tttaaatgta aaaaaccacg cctccgtaaa aggcattatc
     2701 gcgtcgcatt ctgcaaaagc aacgcttgaa gccgaagggg acaatattgt ctaggttaaa
     2761 aatccggaca ccaatacggc tttaatcgat gctttgaaaa aacaataccc caatgcttcg
     2821 aaagaactat acagggtggg gggttcaatc cacgactgga acagtacgca tttcgccaaa
     2881 cggcaaaatc gcattaacgg aattgaaaac ttttggaatt gtacaaaacg gcatttgcgt
     2941 cagtttatag tggattaaca aaaaccagta cggcgttgcc tcgccttagc tcaaagagaa
     3001 cgattctcta aggtgctgaa gtaccaagtg aatcggttcc gtactatctg tactgtctgc
     3061 ggcttcgtcg ccttgtcctg atttttgtta atccactata acggcatttc caaagggcat
     3121 tttaagccgt atttgagaga atgcggatgg cgttttcagt gttttcagcg tgataaaatt
     3181 caaatttcta ttttaaaaca atcagcaaag caggatttat ttcagttgtc cgagacaacg
     3241 ggcggctgca ccgcctgcac tccccatact ttttcaatgc actcgagcag gagtgagacg
     3301 tggggattat cctcgtattc ttccgcataa atgaaattga gcggcatact gtggcggcac
     3361 gattcgataa tagccacgcc cgcgccttct tttgccgccg cttcggcttt gtttcccggc
     3421 accattgcca cacctatacc gcctgcaacc aaatcgataa tggtttgggg gtagtcgcac
     3481 aagatctgtt ttttgggtga gagccggttg ctgcgccaaa actggtgcag gtgcttccta
     3541 cttccggaca cgcccgacat ttctatccat acgcattctt gcaggctctg cggaagggag
     3601 cgggtcagat ggggatattg gctttgcggg caaatcagcg cgtaggtcag gttttgcagg
     3661 aatacgctgc ggatgccgcg ttgggcggcg ttgccgagta taaagccgcc gtgcagggtt
     3721 ttgtgttgga tgcgcgagag gatttcgccg ctcattccgt attggatgtg caggcgcgtt
     3781 ttgggggctg tttgaccgat attgtccgtc agcgcgacga gttttgccga atcgatgggg
     3841 tggataatgc ccaaactggt ctcttccgaa taattgcctg ccagcgtttt ggcaaaatgc
     3901 tccagcttgt gtttgtattg cagcagggat tccgcttcgg gcaacagtat ttcgcccgcc
     3961 cgcgtcaata ccatgccttt ccccgtgcgc ctgaacagcg gcgtgccgac atattcttca
     4021 agggctttaa tttgggcaga aacggcaggc tgggaaagga aaagtcgttt ggcggcttgg
     4081 gtaaggttgc cctcgtgcgc gacggcgaca aatgatttta attgtacggc atccatatat
     4141 ccctccttgt gcggatgttt tctatatttg tgcaatcgaa atcttttagg tggattgttg
     4201 ctgaaaatta actttttaat caagtggttt gtaaattgta tcagttttcc ggatgatggt
     4261 tatcaaaaaa aaagattggt tttattgcct gtttgggctt taaatggggt tacggcttcc
     4321 gaacgcagcc cgtatcaaaa agaaaagtca tgcgcccctt ttacgaggcg cgatatataa
     4381 ggaggaaggt tatggaaaaa cataatggga cttatcggga tttgcaccgt ccagcttcgg
     4441 aatttgcgac gcgggacgaa tatttggaac atgaattgca gattatgcaa ccaaaacgct
     4501 ggcggcccaa cctgcccttt cgcgattacc gcttcgagtg ggaggatttg attcctgcga
     4561 tggcgggaac gattggaaaa gtggtgatgg tgggggcggt ggcggcggcg tttgccgcac
     4621 ctttggggct gcctgacagc tttgtactgg aaaatgtgcg ctatgagctt ttaatcgccg
     4681 ccgcgtttat cttattggta tcgggctttt ttctgcccgg cgccaacctg cccggtacgc
     4741 acgggccgct gattccgatg attcccatcg ttgtgtcggc aggcgggcat cctttggcgt
     4801 tcggcatttc gattgcggtt ttaggtctgc tgatggcttt atttcgcggc ggcagtatta
     4861 tggcgaagct gacaagcaac ggcgtatgcg gcggattatt actctatttg ggctttatcg
     4921 gcacgacggg gcaggtaaaa aaattgtttt cgtgggcaag cggttttaat atgccctaca
     4981 tcgcttttac cgtcattatt gtaacgattg tgatgtacgc tttgttggag cattggaaaa
     5041 aacgctggtt agccgtgcct ttgggatgct tgattgccgg tgtggtggca tttgcattgg
     5101 gtgcgccgtt tgagtttcac accgcccccg gcctgcctcc aatgagtcct gcttattggt
     5161 ggggtgaaaa cagcggctgg catctggggt tgccgacggc agaaagtttt ttggttgtct
     5221 ttccatttgc ggtattggct gttgcaatgt ggtcgcccga ttttttagga catcaagtgt
     5281 tccaaaaaat cagctatccg gaaaaaaccg ataaggtatt gatgaatata gacgacacca
     5341 tgacaagttg ttctgtccgt caagcagtgg gttctatttt agggggtgca aattttacct
     5401 cttcttgggg aacttatatc gtaccggcat cgattgccaa acgccccatt ccgggcggtg
     5461 cggttttaac ggcggtttta tgtattatcg ccgggttatg gggctatccg atggacttgg
     5521 cgatttggca gccggtattg agcgtagcct tggtcgtagg cgtatactta ccgcttttgg
     5581 aagcgggcat ggaaatgacg cgcaaaggca aaaccaccca atccgccgcc atcgtggtgt
     5641 tctcttccgc cttggtcaat ccggttttcg gctgggcgtt gacgatgctg ttggataatt
     5701 tgggcttaat cggctgcaaa gagcgcagtg cgcaattagg tttcgccgga cgcgtgttga
     5761 tacccgcagt aggtttcttg atcttgtgtg tggcgatggg tgcggtcggg atgctgcccg
     5821 gtatcccgcc gtttttggaa cacttcaaat ctttgggcta ggctgaaatc ggaaatgccg
     5881 tctgaaccgc tttcagacgg catttttgca aacaggcaaa atgacggcgg cgggattttt
     5941 tattttcccg attgaagtat aatgttgccg ggcttcaact ggatattcaa aacggtttgt
     6001 tccaacactc ggaacggcgc ataaaacgcc gcccttcgcg ttatcccgaa cggggcggct
     6061 aatcagattc tatcgccata aaaggcgggg tttcaaccga aaaggaattg agatgaataa
     6121 aaccttgtct attttgccgg tggcaatctt actcggcggc tgcgccgccg gaggcggtaa
     6181 cacattcggc agcttagacg gtggcacggg tatgggcggc agcatcgtca aaatggcggt
     6241 cgggagccaa tgccgtgcgg aattggacaa acgcagcgaa tggcgtttga ccgcgctggc
     6301 gatgagtgcc gaaaaacagg cggagtggga aaacaagatt tgcgcttgcg tcgcccaaga
     6361 agcacctgaa cggatgatcg gcaacgatgt gatgcagatg ctggatccgt ccacgcgcaa
     6421 tcaggcactt gccgccctga ccgccaaaac ggtttccgcc tgcttcaaac acctgtaccg
     6481 ctaactttct tcagacggca tgaggcagat gccgtctgaa gccgttttcc tgcaatttcg
     6541 acagacgaga aaaatcatga aatacatcag cacgcgcggc gaaaccgcac acaaaccgtt
     6601 cagcgaagtt ttattgatgg ggcttgcacc cgacggcggc ctgatgctgc cggaacatta
     6661 tccgcaaatc gggcgggaag ccttggacaa atggcgcggt ttggcttatc ccgaattggc
     6721 gtttgaaatt atgcgcctgt tcgttaccga cattccggag gacgatttgc gcgatattct
     6781 gaaccgtact tacacggaag cggcgttcgg tactaaggaa atcacccccg tccgcacgct
     6841 ttcagacggc atcaaaatcc aagccttgtc caacggcccg acgctggcgt tcaaagatat
     6901 ggcgatgcag tttttgggca atgcgtttga atatgtttta aacaaagaag gcaaaaaact
     6961 caatatcttg ggcgcaacca gcggcgatac gggttcggct gcggaatatg ccttgcgcgg
     7021 caaaaaaggt gtgaatgtat ttatgctgtc gcccgatggc aaaatgagcg cgttccaacg
     7081 tgcgcagatg tacagcctgc aagacgggaa tatccacaat atcgccgtga agggtatgtt
     7141 tgacgactgt caggatattg tgaaggcggt gcaaaacgat gccgcgttca aggaaaaata
     7201 ccatatcggt acggtcaatt cgattaactg gggacgcatc gtcgcgcaag tggtttatta
     7261 ctttgccggc tatttcaaag cgacgcaaag caatgacgag caagtcagct tttgcgtgcc
     7321 gagcggcaac ttcggcaacg tttgcgcggg acatattgcc aaacagatgg gcttgcccat
     7381 ccgccgcctg attgtcgcga ccaatgaaaa cgatgtgttg gacgagtttt tcaaaaccgg
     7441 cgcgtaccgc ccgcgcaaca gcgcgcatac ttatgttacc tccagcccat ctatggacat
     7501 ttccaaagcg tccaatttcg agcgtttcgt gttcgacctg atggatcgcg atcctcagga
     7561 aatcaatacg ctgtggacgg aagtcgcggc gggcaagggc tttgacttgc agtttgcctt
     7621 agacaaagtc ggcggcaaat acggctttac ctccagcaag tccacccacg ccgaccgcct
     7681 cgccaccatc aaacaggttt acgagcaaga ccaagaactc atcgacccgc acactgccga
     7741 cggcgtaaaa gtcgcccgcg aagtgcgcga agaaggggaa acggtggttt gtttggaaac
     7801 cgcgttggca gcgaaattcg atgcgaccat acgcgaagcc gtcggcgatg ccgccattcc
     7861 gcgccctgcc gcgctggaag gtttggaaaa cctgccgcag cgcgtgcaaa ccgtgccgaa
     7921 cagtgcggat gcggtaaaag gcatcatcga acaaaccctt gcctgatgtt ccgtacaggg
     7981 gcactccgtc cgaacttaag attgaaagaa aatgacctta cctatgcagg aaacccgttt
     8041 ttccatactg ctagacgaat tggcggcaaa acagaaggca gccatcgccc cccacctgct
     8101 tgccgacggg agcaaggtat ggatacgcaa agcaggcagg cacaatgcgc gatggcgtta
     8161 cgcgctgctc ggtatggttg cccgatattt gaaactgggg gtgttgaagc cggttcccag
     8221 cctcggcggc gagcctgcca ttgcaaccga atcaaaacgc ctgtacgaat tgcgcgcggc
     8281 gaggatagcc gttcccgaat tgctcgccgt caggaaaaat gcccttatgt tcggcaattt
     8341 ggaaggcatc ccgctcgata cgcaaatccg ccaagaagcc gaagccggaa aggcggacgc
     8401 ttggcttgcc ggtttggaag ccattgcacg cgtgcataaa aaacagcagt tcctcagtca
     8461 ggcgtttgcg cggaatatga tgtcggacgg aaaaaacatc agctttctag attttgaaga
     8521 cgacccttcc gaagtcctga ccatagcgca atgccaagcc cgcgattggc tctgctacat
     8581 ccattcgacc gcgctgatat tgaaaaacgg cggactgctg gaagcggctg cggaaaaatg
     8641 gggcggcgta ttgtcggatc agcctgccga aatacaaaag ctgattgccg ccaccgtcaa
     8701 accgatcctc ccgatacgca ggctggaaca cccacgctgg ggacgggacg cactcaggct
     8761 ggcagcctcg atttccctga tttcccttgc cgatatgccg ccataagccg ccgcccgccc
     8821 cgcgatgccg tctgaagccc ttcagacggc atataaccaa cgcgcatcaa gcattgtcgc
     8881 aaccatccgt ttcgtttaga attttggctt tatcccgaat cgggcagaca tttccactct
     8941 gccgcacctc ccgaacaagc actatccatt tcttttactg acaggaaacc caaatggcag
     9001 cattcaatac ccaaaaagta ttgtccgtac accactggac agacgcatat tttaccttta
     9061 cctgcacccg cgacgaatcg ttgcgctttg aaaacggaca gttcgttatg gtcggattga
     9121 tggtggacgg caagccgctg atgcgcgcat acagcgtcgc ctccgccaac tgggaagaac
     9181 acctcgaatt tttcagcatt aaagtccaag acggcccgct gaccagccgc ctgcaacacc
     9241 tcaaagtcgg cgacgacgtg ttaatcagca aaaaaccgac cggaactctg gttgccggcg
     9301 acctgaatcc gggcaaacac ctttacttgt tgagcaccgg taccggcatc gcccctttct
     9361 tgagcatcac caaagacccc gagatttacg agcaatttga aaaaatcatc ctcgtacacg
     9421 gcgtgcgcta caaaaaagat ttggcgtact acgaccgctt taccaaagaa ttgcccgaac
     9481 acgaatacct cggcgacttg gttaaagaaa aactgattta ctacccgatt gtttcccgag
     9541 aagaattcga acaccacggc cgtctgaccg acctgatggt aagcggcaaa ctgtttgaag
     9601 acatcggcct gcccaaaatc aacccgcaag acgaccgcgc gatgctgtgc ggcagccccg
     9661 cgatgctgaa agatacctgc aaagttttgg acgatttcgg tctgaccgtc tctccgaaaa
     9721 ccggcgtgcg cggcgattac ctgattgagc gcgcgtttgt ggatcaataa gctgcttgaa
     9781 aatgccgtct gaacggcatc agcgataaaa aaacccgaat cctgccaatc aggattcggg
     9841 gtttttatag tgggtaaaaa ttagaaatgc acatttccgt cattccaaca caggtgggaa
     9901 tccggactta cctgtttcat tatcgtttga aaataaaaga gaaaccaaac atatagattc
     9961 ccgcttgcgc gggactgacg acggtgttct gcgtagccaa agcagaaaaa catccttatt
    10021 gtcatttcat catgatataa caataaggat gttaaaaatt agttatcatt atatgcatga
    10081 tatataagaa aaattgtccc aataagaaat gttatgcaga aaataaaatg aaaaggatgg
    10141 ttttcattga aaatggttgt tctgccatcg tcatacacag aaccggtatt tggaaaaaaa
    10201 taatccatat tgacatcatt attccattta tcgcataaat ccacttttta atttttttcc
    10261 acattaatat aatctcttat ttaataaaat caaaataaaa atcaaatgcc taacaattcg
    10321 atctcaaatt ttgaacgcca acgtgtttga gcggtaacaa tacatacttt aagtttgcaa
    10381 tccttcatcg tcttattttt gttttcatca actatacgtc taaagcaacg ccgtccgtca
    10441 ttgttcggac ggcatttttt cagactgcat tttcccccgt ttgtgaaggc gcagggcgtt
    10501 gcccaaaacc gccagcgaac tgaagctcat acccagtgcg gctatccacg gttggacata
    10561 gcccaaaacg gcaagcggta cggcaatgat attgtacgcg cccgcccata tcaggttttg
    10621 ccggataata tggcgggtgc gccgcgcctg atcgagcagg tgggcgacgg tacgcaaatc
    10681 ttcgttcaat aacacaatgt ccgcgccgtc cctcgcaata tccgtcccgc ccgctgcggc
    10741 ggcggatacg tctgcctgcg ccaaaacggg cgcgtcgttg atgccgtcgc ctatcatcag
    10801 cacttttttc ccttcttttt gcaaggcttt gacgtattcc agtttgtcct cgggcatggc
    10861 ttgggcgcgg tagtgcgcga cacccagggc acgggcggtt tcggcaacgg cggtttcgcg
    10921 gtcgccgctg aggatgtgca gggtcaggtt tttgcctgcc aactgccgca ccgcctccgc
    10981 cgcgctgtct ttcaaggggt cggtcaggta gaacacggct tggaaaccgc tttgactgcc
    11041 gaggtaaacc gcgctgccgc cgccttctgt ttgcggttct ttacctgaaa tttcggcgac
    11101 ataggatgcc ctgcccaatg cccaaacctg tgtttcgccg ttgacggtca gttgcgcgcc
    11161 cacgccttcg ccgatgcggt tgaggcgttg tttaatagcg atgtcgggga cgctgccgtc
    11221 tgaaatgcgg cagttgagga tggcgcgggc aaggggatgt tcggactgtt gttctaaagc
    11281 ctgcgccacc gcgagaacaa aggcttcgtc tgtgcctctc aacaatgaga tacggcggac
    11341 ggcgggtttg ccttgggtca gcgtgccggt tttgtcgaag atgatgtcgg tggtttgggc
    11401 gagggtttcg attgcctgct ttccgccgat taaaatacct tcgcgcgcca gcgtaccggt
    11461 agaagctgcc agcgcggtcg gcgtggcaag cgataaggcg caggggcagg taatgaccag
    11521 cagggcgacg gtaatccaca atgcggtgtg cgcgtcggcg tacagcgtcc agccgatgaa
    11581 gacggggacg gcaagcagga gttcgccgaa tatgaaagac gaggcgtatt gttccgccaa
    11641 ctcggcagtg cgcggttttt gcgctaaggc gcggtcgagc aggcggacga tgtgcgacag
    11701 tcgcgtgccg ccgccggtgc ggtcggtgcg tataatcagg gggctttgcg tgttgagtgt
    11761 gccggcggtt actttttcag acggcatttt ggcgacgggc aggctctcgc cggtcagcat
    11821 agattcgttg acggcactgc ttccttccag caccgtgccg tcaacgggga tggtttcgcc
    11881 cggtttgacc agtaccacat cgcctgcttg gagcttgacg acggcggctt cgcggacatc
    11941 ctgtacggca ggatagccgg gcatccggtg gcagaaggcg ggtatcagtt tcaccagcct
    12001 ttcggcagca tcgcctgcct tgcgccgggc aatgtgttcc ataaagcgtc cgcccagcag
    12061 gaaaaacagc agcatggcga tggattcgaa atacatcccc tgccccgcat tggtcgcaag
    12121 gctgtaaacg ccggcgataa aggtcatgat gatggcgacg gcaatcggcg tatccatgcc
    12181 ggcgcggagg tttttcaggt cgcgcaacgc gccttgataa aacgggacgg cgcaatagaa
    12241 tacgacgggc agcaccatta aaaagccgcc ccaatggagg atttgcagga aatcgggttc
    12301 gatgtcgccg ccgtaaaggt aggtcggcag cgcgaacatc atcgtctgca tcatccccag
    12361 cccggcaacg gcgaggcgga cgatgtattg ttttcgttct ttttggttgg cggcttcgat
    12421 tttttgcgcg tcatagggtg cggcggtgta gcctatctgc ctgattttca acagaatgtc
    12481 ggaaaggcgg attttgccgt cgtcccagac gacgcggcag cggtgcgtgc tgtaattgag
    12541 gtcgatgcgg acgatgccgt ctgtacgcaa aagctgctgt tcgatcagcc agacgcaggc
    12601 ggcgcaggtg atgccgccga gcattaaaac cgcctcgcgc gtgccgccgt gggtttccac
    12661 aaagtcggac tggacttcgg gcaggtcgta caggcggatt tggtcgagga tttcttgggg
    12721 cggcagctcg gttttttgcg cgtcggcggt gcgttgtttg taataactgc ccaagcccgc
    12781 gtcaataatg ctttgtgcga ccgcctgaca accggcgcag caggtttcgc ggtcttcgtt
    12841 ttcgtaacgg acagtcaggt ggaggtgttc gggaacatcc agaccgcagt ggaaacaggt
    12901 ttttttcatg gcatttcggt ttcgtctgtg tttggtgcgg tggcacaata ctcggcaatg
    12961 gcttcgcgca gtgcgtctat accggtattt tcagcaacgg aaatgcggac ggtggcaatt
    13021 tttcccgcag cgtcgcgcca tatgcccgtg ttttgttctt cagacggcag caggtcggtt
    13081 ttgttgtaca ccttgatgca cggaatatcg ccggcatgga tttcttgcag tacgttttcc
    13141 acgtcttcaa tctgctgtcc gctgttcggg gcggcggcat cgacgacgtg cagcagcaca
    13201 tcggcttgcg cggtttcttc cagcgtggcg gaaaatgccg aaatcagttt gtgcggcaaa
    13261 tcactgacga atccgacggt atcggtcagg ataatgctgc attcgggact gatgtacagc
    13321 cgccgcgccg tggtgtcgag tgtggcgaaa agctggtctt tcgcatatat gcccgacttg
    13381 gtcagccggt tgaacaggct ggatttgccg acattggtat agccgaccag cgcaaacgtt
    13441 ttgattgtgc ccgattcgcg gggcttgcgg cgcagggcgc gctgtttttt gaggttgaca
    13501 agctgttttt tcaaggcatt gatccgatgg gcgatcaatc ggcggtcggt ttccagtttg
    13561 gtttcgccgg ggcctttcat gccgataccg ccgcgctggc tctgcagatg gccgtaaccg
    13621 cgtatcaagc gtcccgccaa atggctcaat tgcgccaact cgacttgcag cctgccttcc
    13681 tgcgtgcggg cgcggcgggc gaaaatcgcc agaatcagcc ctaccctgtc caatacgcgg
    13741 catttcagtt ctttttcaag gttgcgttcc tgcgtgggcg tgagttcgtg gttgaatacg
    13801 accaaatcga tgccgtctgc ggcaactgct tctgacagct ccgccgcctt gcccgtgccg
    13861 acaaacagcg cggtgtgcgg acggtcgcgt ttggcagtct ccacgcgcac ggaatcgccg
    13921 cccgccgctt tgaccagctc gacagcttcc gccaatgccg tctgaaaacc gttcagacgg
    13981 gtggcactgc tgcccgtacc atctttgtcc aacattacgc ccaccagcat gacgcgttcg
    14041 ggttgcgctt gggtactgcc gttgccgcct gttctgcctg tcatgtattc aatcctgtaa
    14101 ataaagggtt acgcctcgtt ccgtttctcc ttccggtgca agcgtgatgc ggctgcccgc
    14161 cattccgtca acgctgaaga cgatgccgcc cgcctcgtgc cttcctatgg acaggcggct
    14221 gccgggtcgc tgccggtagg tataacgggt acacgcttcc aaacaccagc gtccgcgcca
    14281 gtggatgaaa tatttttcgc cttttctaac cgcaagtgtc tcgccgccgt ttacctcaaa
    14341 ataagggtaa tcgggttttc gggttctaaa ctgccatttc gcctgcgcgc gccgtccgtt
    14401 gcggacatag tcgaataccg ccgtataaag cgtgccgtat tccaaaggct tgagcggaaa
    14461 aagcgcgaat tggtacgcgg tcagcctgcc gttggggtcg ttgccggcgg ttaaaaccct
    14521 gacggggcgg atttcgtttt taccctgata cagcttgaaa cttttcatcg taattttgcc
    14581 tgccgcctcg gaaaaatcaa tgctggcagg attgcccgtg atttcatatt ccggcacggg
    14641 gtctggacgc tcgccgtgga aataaggcag tgcgccgctg ccgacgggat aggctgtata
    14701 gagcagctcc tgtgcgggca tggcttcgtc ggtgtacacg accgcaccgt tatggcaggc
    14761 gttgcggtaa tatttccgtc ctgcttccgg ctgatttctg ccttgggcgc aatgccgctc
    14821 aaacctgctg ttgccctgat tgaatacgag aacggtttta ccgttttcgc gcacaaatgc
    14881 cgctcctgcc tcatccgtat ggcggtcaag tagggaaagg cggtggtaga ttgcgctcat
    14941 taatccgtcc acttggcgtt gctgcgtgcg gatgtcgctg tcggacgatt cggcggcttc
    15001 ctcttccgtg ctgatgtttt catgcacgcc gttgtagaga tacccggcaa ggcgtgtgcg
    15061 ttcggtcagc ttttgtgcgg tgtagtgcgg attgtcggga tggtgttcgc cgtgtccgtc
    15121 ttcgggattg agcgtgagat agcgtgcgtg cctgcgggcg gaattttcca aaaccggcgc
    15181 gtgtgccagc ttgtgcaaac cgatttgggc tcggatgcgg ttgaggtagt gcagcgcatc
    15241 gccgccgtcc ctgatttgcg gtgcggacgg atagacaagt tcgcccgcgg gcagggattg
    15301 gttttgggta tgatagaaaa cgcctgccgc cgaacccaac aggagcagcc gaataaaaag
    15361 ggatttcata atgccgtcct cccgacgcgg caacggggtg ttttatcaaa acggcaaact
    15421 tgccaatgcg gtttccgatt gcagattgcc aaaccggcaa acctttcccc gtgccgatgc
    15481 cgaacctgat gccgtctgaa ccttcagacg gcatcggatg tttatttgtc cacccggatg
    15541 ggtgcaggtt catattgtgt cgattcgtcg ccgtaataca gcacgccgag tttgatggag
    15601 attctgccct gcgatttgcg gtgggcattg gaatcgcgca aggaataggc gcaaccgcaa
    15661 tattcctgct ggtagaagtt ttcacgtttg ctgatttcaa tcatgcgcgc gctgccgccg
    15721 cctttgcgcc agttgaaatc ccaatacacc acatcatcgt aaggcgcggc ggcgcggtgt
    15781 ccgcagtcgt tgatttgcgc catatttttc cagcgtgaaa tgcccagcga actggtaaag
    15841 acggggaacc cgtgttcatg cgcgtattgc gccgcctttt caaaacgcat atcgaaacac
    15901 atggtgcagc ggatgccgcg ttccggctca aactccatgc ctttggcttt ggcaaaccat
    15961 tctttgcggt cgttttcgta gtcgtcgtct ttatcgatga aaggaatgcc gaacttttcc
    16021 gcaaagcgca cgttttcctc ttttcggagc atatactctt tgtgcggatg gatattggga
    16081 ttgtaaaaat aaatggtgta gtcgatgccg gaggcaagca tcgcctccat cacttcgccg
    16141 ctgcacgggg cgcagcagga atgcagcaag acttttttat gtccgccggg cgggacgagt
    16201 atggggcggt caatgtcggt aacggtaggt ttgttttgtg tttccattaa cttaacaata
    16261 tctgttgaat acggttgaag cggctatttt atcagagccg ccgcatgtaa aacagagtgt
    16321 cagggcatca acccgagctg tctgaacgaa cggacgcttt gcgaggtaac gataaaatgg
    16381 tcgagcagcg acacatcgac cagcgacatt gcctgtgcca gccgccttgt gaacatgatg
    16441 tcttcctgcg aaggttcggg cgagccgccc ggatggttgt gcgcgataat caggctgtcg
    16501 gcatattcgt ccaatgccag tttgacgatt tcgcggatgt aaatcgtgtt ttccgcaacc
    16561 gtaccgcgcg acagctctct gaccgcaatc agttggtttt ggcggttcag cagcagcgcg
    16621 acgctgactt cgactttttc ctgccccaaa tgaaagcgta aataatcggc caccgtatcc
    16681 ggatcggaca ggacgatgct ctcctgcaat tcttccgcca atatccgccg cccgatttcc
    16741 ctgaccacgg caaactgtgt gaaacttgcc gtccccatcc ctttgtatgc cgacagtttg
    16801 ccgacctccg cgctcatcag cctccccaaa ctgccgaact cctgcagcaa ataacgcgcc
    16861 aaatcaaccg cactcattcc gcgcgtgccg acgcgcagca ggattgccaa aagttcggca
    16921 tcactcaaag ccgccgcccc gcgttccaac agcttttccc tgggcctttc cccctccggc
    16981 cattgcttga tgctcatgtt ttcccttttt taaatagtct gagatgccgt ctgaaacaaa
    17041 tgttcccaca cgccaaatat ccgaaatgcc gtctgaaccg gatttccgct tcagacggca
    17101 tctgtatttc aaaacagtct tacgccgttt cttccaactc gattgaagcc gccagaagcg
    17161 acaggcgtgc cattacgccg taaacgtaga ggcggttgtg ttcgttgtcc acgtcgcagt
    17221 ctttttcaga gcgcggcata cccagcgagt cccattgttc gaatacgcgc ttgcaggctt
    17281 cgggcgcttc ttgggaatta tcgccgttac cggtaggaat gctgttagac agcggaacaa
    17341 acaccatacc gccggcgttg aggttttcgt ccgcaccgcg cccttcgtgt acgcggaaaa
    17401 agccgccgat gacgaagcgg tccatcatat acacgacggg ttcgcacacc gcgctgttta
    17461 aggtttcata agtataaatc ccttcttgga caatcacttc gctgacttcc aaaccttctt
    17521 tgactttcgc cattttattg cggtttttac ggttcaatcc gcgcacttcg tcggcggatt
    17581 tgacgctcat cacgcccatg ccgtaagtgc cggcatcggc tttgacgatg acgaaaggtt
    17641 tgtcggtaat gcccgattcg tcgtatttgg cttgaatttt cgccagcaca cgttctaccg
    17701 cctccgccaa cgcgtcttcg ccttcacgcc cttggaagtc caaaccgccg attttttcaa
    17761 aataagggtt aatttgccat tcgtcgatgc cgattaactt ggcaaattcg gcggcaactt
    17821 ggttgtacgc gccgaaatga tttgttttgc ggcgcgtcgt ccaaccgccg tgcaacggcg
    17881 gcaaaacggt ttggctgatg cctttgagga tgtcgggaat accggcggac aaatcgttgt
    17941 tcaacaaaac cacgcaaggc gaaaagccgt ctgcaagatg gacgcggtcg cgggtacgca
    18001 ataaaggttc caacaggatt ttgtcgccca atgcggtttc aaattcggtc ggttcggtta
    18061 cttccggatt caggctgccc aagcgcactt cataccctgc cgaacacaaa atctcgccga
    18121 gggcgtaaac gttttgcagg taaaacgtat tgcgcgtgtg gttttcggga ataatcaata
    18181 cggatttcgc cgtttcacag gcgcgttgca ccgcatcttg cgcggcaacc gccgccagcg
    18241 ggataaagtt gggattcaga ttattgaagc cgccggggaa caaattcata tcgatagacg
    18301 aaattttgta accggcattg cgtatatcga ccgaaccgta aaacggcggg cggtgtacgc
    18361 tccactgcgt gcggaaccac gcctcgattt tggcgtgatt ggacaggatt tttgcctcaa
    18421 acgcctgaag ttgcgccgaa tgttcgggcg acatcaccgg taatttcatc tttcgtctgc
    18481 ctctgtgtgt tttttgacaa gatgcagatg ataatgcctt tgaaagaatg acgacaagta
    18541 ttctttcgta tcgaatcatg ctttagatat aactgtttac tgaaatggac aatatgtcta
    18601 attttttcgt taaaattgtt tgcaaaataa caccggctca aaaattagac aaaatttgtt
    18661 gcgcggtata aagaatacgt ctaaaatccg cccaatccgc attaccattt atccaaaaga
    18721 acaacatcat gacagcacaa accctctacg acaaactttg gaacagccac gtcgtccgcg
    18781 aagaagaaga cggcaccgtc ctgctctaca tcgaccgcca tttggtgcac gaagttacca
    18841 gccctcaggc atttgaaggc ttgaaaatgg cggggcgcaa gctgtggcgc atcgacagcg
    18901 tcgtctccac cgccgaccac aacaccccga ccggcgattg ggacaaaggc atccaagacc
    18961 cgatttccaa gctgcaagtc gatactttgg acaaaaacat taaagagttt ggcgcactcg
    19021 cctattttcc gtttatggac aaaggtcagg gcatcgtaca cgttatgggc cccgaacaag
    19081 gcgcgaccct gcccggtata accgtcgtct gcggcgactc gcacacttcc acccacggcg
    19141 cattcggcgc actggcgcac ggcatcggca cttccgaagt cgagcacacg atggcgaccc
    19201 agtgcattac cgcgaaaaaa tccaaatcca tgctgattgc cgttgacggc aaattaaaag
    19261 cgggcgttac cgccaaagac gtggcacttt acatcatcgg gcaaatcggc acggcgggcg
    19321 gtacaggcta cgccgtcgag tttggcggcg aagccatccg cagcctttct atggaaggcc
    19381 gcatgacttt atgcaatatg gcgatcgaag ccggtgcgcg ctcaggcatg gttgccgtcg
    19441 accaaaccac catcgactat gtaaaagata aacccttcgc acccgaaggc gaagcgtggg
    19501 acaaagccgt cgagtactgg cgcacgctgg tgtctgacga aggtgcggta ttcgacaaag
    19561 aataccgttt caacgccgaa gacatcgaac cgcaagtcac ttggggtacc tcgcctgaaa
    19621 tggttttaga catcagcagc aaagtgccga atcctgccga agaaaccgat ccggtcaaac
    19681 gcagcggtat ggaacgggcc cttgaataca tgggcttgga agccggtacg ccattaaacg
    19741 aaatccccgt cgacatcgta ttcatcggct cttgcaccaa cagccgcatc gaagacttgc
    19801 gcgaagccgc cgccatcgcc aaagaccgca aaaaagccgc caacgtacag cgcgtgttaa
    19861 tcgtccccgg ctccggtttg gttaaagaac aagccgaaaa agaaggcttg gacaaaattt
    19921 tcattgaagc cggttttgaa tggcgcgaac cgggctgttc aatgtgtctc gccatgaacg
    19981 ccgaccgcct gaccccgggg caacgctgcg cctccacctc caaccgcaat tttgaaggcc
    20041 gtcaaggcaa cggcggacgt acccacctcg tcagccccgc tatggcagcc gccgccgccg
    20101 ttaccggccg ctttaccgac atccgcatga tggcgtaagt attttcaggc ggtctttaag
    20161 aatttgacgc ggccgtctga aatatgtccc gtaaggcaga aacaccttta atattcaaac
    20221 caaggagttt aaccatgaac aaacttttca ttaccgccct gtccgccctc gccttgtccg
    20281 cctgcgccgg cacttgggag ggcgcgaaac aagacaccgc ccgcaacctt gacaaaacac
    20341 aggccgccgc cgaacgcgcc gccgaacaaa caggcaacgc cgtcgaaaaa ggctgggaca
    20401 aaaccaaaga agccgtcaaa aaaggcggca atgccgtcgg acgcggcatt tcccatctcg
    20461 gcggaaaaat cgaaaacgcc accgaataac cgattcgcga tgccgtctga aaccgcttca
    20521 gacggcatcg tcagcacaag acgcaaaccc atgaaagcct ttaccaaaat taccgccatc
    20581 gtcgccccgc tcgaccgcag caacgtcgat accgacgcca tcatccccaa acaatttctg
    20641 aaatccatca aacgcagcgg tttcggcccc aatgcctttg acgaatggcg ttacctcgac
    20701 cacggcgaac cgggcatgga caacagcaaa cgcccgttga accctgattt ctcgctgaac
    20761 cagccgcgtt accaaggcgc gcaaatcctg ttgacgcgta aaaacttcgg ttgcggctct
    20821 tcacgcgaac acgccccttg ggcattggac gactacggct tccgcgccgt catcgccccc
    20881 agcttcgccg acatcttctt caacaactgc tacaaaaacg gccttttacc tatcgtgttg
    20941 accgaagaac aagtcgatcg gcttttcaaa gaagttgaag ccaacgaagg ctatcagctc
    21001 tccatcgacc ttgccgaaca aaccctgacc acccctggcg gcgaaacatt cacattcgac
    21061 attaccgaac accgcaaaca ctgcctctta aacggcttgg acgaaatcgg actgaccctg
    21121 caacatgccg atgaaattca cgcctttgaa gaaaaacgcc gccaaagcca gccttggctg
    21181 tttaacggtt aaaacctatg ccgtctgaag gccgttcaga cggcatttct gataacatat
    21241 aattgctgca actgatgtaa acagagggat tatcaattgc tttcatcttt caagcgggct
    21301 tagcaacgct ctaaattaat gcaatacaac tctatttcaa ataaattttt agatttttaa
    21361 tatgcaacaa attaaattta ttgacttatt ttccggaatg agtggcatca ggaaaggatt
    21421 cgaacaagcc tgtcggaaac agtcggttgc ttgcgaatgt gtttttactt cagaaatcaa
    21481 accggcagct ttggaagtat tgaagcaaaa ctaccctgat gaagtgccgt atggagacat
    21541 aacgaaaatt gaaacagggg atattcccga ttttgacatt ctgttggcag gcttcccttg
    21601 tcaggctttt tctttcgccg gaaaaagatt gggctttgaa gatacacggg gaacgctttt
    21661 ctttgatgtg gcaaggattt taaaagcaaa aaaaccaaaa ggttttattt tggaaaatgt
    21721 ggaaggattg gtgacacacg atagaaaaga ttcgacacaa aaatagggcg caccctgacc
    21781 gttattttgg aaaccttgga agcattgggc tactatgttt cttggaaagt tttaaatgca
    21841 aaagatttcg gcattcccca aaacaggaag cgcatttatc tgacaggcag tttgaaatcc
    21901 aaacccgact tatctttcga aacaagccca agtccgaaat taaaaaatat tttggaatcg
    21961 ggactgccta ctgaaagcag ccctttcatc aagaaattgc taaaaaaatt tcccccgtcc
    22021 gaactgtacg gaaaatcagt aaaagacaaa cggggaggga aaaacaatat tcacagttgg
    22081 gatattgaat taaaaggcgc agtaaccgaa gaagagaagc aattgttaaa tatccttcta
    22141 aaagaacaga ggaaaaaaaa tgggcttcag aaatcggcat agattggatg gatgggatgc
    22201 ctttgacaaa agcgcaaatt tcaactttct ataaacaccc cgatctccaa aatattttgg
    22261 acagcctgac agataaaggc tatttggttt tagagcatcc gaaacaaaaa attggcgggc
    22321 aaagaatcaa agatgaatcc ctgcccaaag gctacaatat tgtttcaggt aaaaaatctt
    22381 ttgaaatcaa taaaatatta gatccaaacg atgttgcgcc aaccttggtt gcaatggata
    22441 tggagcacct tttcgtcgtt gacaacggcg gtttgcgtac acttaccgga aaagaagggt
    22501 tgcgcttatt cggctatccg gacgattatt cgtttgatat tcccaaaaaa gacagatgcg
    22561 atttattggg taataccgtt gccgtccctg tgattaaggc ggtatctgaa agacttctgc
    22621 atactttata aaccgacagg gataaaatga taaaacttac tgcacaacaa atatttgata
    22681 agttgctgga tgaagaaaaa atcttatcgg ccaatggtca aattagattt ttcttgggcg
    22741 atgtggatat tatcgtcaaa caaaaagatg ttgtcggcaa catcattcag gaatggctcg
    22801 gcggatgatt gagaaaaagg gaaattgaat ttgatgtttc aaccaatacc caaatgcctc
    22861 ccgatttctt tttaaataaa aaagaccgca gcagagaatt gttggaagta aaggcgttca
    22921 accgaaatac cggcccgggt tttgatattg cagattttaa aatgtattct gatgaaatca
    22981 ttcataagcc ctatatgctg gatgtagact atttaatatt cggttacgat atggacgaca
    23041 acggcaatgt aaccatcaag gatttatggc ttaaaaaagt atggcaaatt acgagaagca
    23101 tggatgggtg ggcaattaat cttcaagtca aaaaaggcgt ggtgcataaa atccgcccgg
    23161 gtgtttggta cagcataaat aaaaagaata tgcctatgtt tgaatgcttg gaagattttg
    23221 tttccgcaat tgaagaaacc gtttatcaaa acccggcaac acggcataac gcatccttat
    23281 ggaaaaagaa atttgaggaa gcctataaaa aacactacaa ccgatcgatt tccatacctc
    23341 gttggcacga aattgcacac aaatacaaaa agaaataacc cttcaaccat caacccataa
    23401 ggaaacttga aatgaccaaa catatcgcca tcctccgagg tgacggcatc ggtcccgaaa
    23461 tcgtcgccga aaccgtccgc gtactcgaca aactcatcgc ccaaggtttg gatgccggct
    23521 acgaatacgc cccattgggc ggcgaagcct atgacgaata cggtcatcct tatcccgaat
    23581 ttacgcaaaa cctctgccgc aaagccgatg ccgtcctgct tggtgcagtc ggttctcctc
    23641 aatacgacaa cctcgaccgt ccgttgcgcc ctgagcgcgg cctgttggca atccgtaagg
    23701 atttgaacct gtttgccaat ttgcgtcctg ctgttttata tcccgaatta gccaacgcct
    23761 ccacgctgaa gcctgaaatc gttgccggtt tggatatttt gattgtgcgc gaactcaccg
    23821 gcgacatcta tttcggcgaa ccgcgcggca tccgcgttct ggaaaacggc gaacgcgaag
    23881 gctacaacac catgaaatac agcgaaagcg aaatccgccg catcgcccac gtcgctttcc
    23941 aatccgccca aaaacgcagc aaaaaagtct gctccgtcgg caaagccaac gttttggaaa
    24001 ccaccgaact gtggcgcgaa atttttgaag aaatcggcaa acaataccct gatgtcgagc
    24061 tttcccatat gtatgtggac aatgccgcta tgcagttggt acgcgcgccc aaacaatttg
    24121 acgtgattgc caccggcaac atcttcggcg atattttatc ggacgaggcc tctatgctga
    24181 ccggctccat cggtatgctg ccttctgctt ctttggacga aaacggcaaa ggcctgtacg
    24241 aaccgtctca cggctccgct cccgacatcg ccggacaaaa caaagccaac ccgctggcca
    24301 ccatcctctc gctcgcaatg ttgctgcgtt acagcctgaa cgacgaagcg cgcgcgcaac
    24361 aagttgaaaa cgccgtccaa aaagtgctgc aacaaggctt gcgtaccagc gacatttacg
    24421 aagaaggcac aaaactcgtt tcctgctccg aaatgggcga tgcggtactc gccgccttgt
    24481 aaaaaaacaa agcgcggatc acaccgcgct ttttcatctg cccttttccg ctcgccccgt
    24541 tcgtcaaccg cctgcaaagc caccgtttac cggcaggaaa tgccataaat ccccgcctat
    24601 gttaggataa acgcctttac tggctcacac aaaggattat catcatgaaa aaaatcatct
    24661 tcgccgcact cgcagcggca gccgttggca ctgcctccgc cgccacctac aaagtggacg
    24721 aatatcacgc caacgcccgt ttcgccatcg accatttcaa caccagcacc aacgtcggcg
    24781 gtttttacgg tctgaccggt tccgtcgagt tcgaccaagc aaaacgcgac ggtaaaatcg
    24841 acatcaccat ccccgttgcc aacctgcaaa gcggttcgca acactttacc gaccacctga
    24901 aatcagccga catcttcgat gccgcccaat atccggacat ccgctttgtt tccaccaaat
    24961 tcaacttcaa cggcaaaaaa ctggtttccg ttgacggcaa cctgaccatg cacggcaaaa
    25021 ccgcccccgt caaactcaaa gccgaaaaat tcaactgcta ccaacgcccg atggagaaaa
    25081 ccgaagtttg cggcggcgac ttcagcacca ccatcgaccg caccaaatgg ggcgtggact
    25141 acctcgttaa cgttggtatg accaaaagcg tccgcatcga catccaaatc gaggcagcca
    25201 aacaataaat cttgatgcga atcagcacaa atgccgtctg aacgtccttc aaacggcatt
    25261 tgtgccgtct tcatcaaacc gccccgccaa cggtaagccg atatggcgga gcacaatccg
    25321 ccgaaagata tttcagcggc aggcagggct tgccggaaag tccggaaagt atag
//
LOCUS       DAWGKF010000011        22450 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.011, whole genome shotgun sequence.
ACCESSION   DAWGKF010000011 DAWGKF010000000
VERSION     DAWGKF010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22450)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22450)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22450
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.011"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            43..606
                     /locus_tag="WHR07_000308"
     CDS             43..606
                     /locus_tag="WHR07_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEZ2129576.1"
                     /translation="MRHLENNGYANVAGLERILAVKTDNYKEKENLLHEIFSKSRIGD
                     TELFAVDENLVKRLFLSLRGEIVFPKNETAESEFEKSVHERRQEGNAGSGRKQLLDLV
                     RRGHREYPYALPRLLAGAASYKPKKSKIRLFKEAYFGKSGTRLTDEIADGIHIYTCFS
                     RADLEKAYSEYLELFKSESDAEGRKPQ"
     gene            643..1404
                     /locus_tag="WHR07_000309"
     CDS             643..1404
                     /locus_tag="WHR07_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2314 domain-containing protein"
                     /protein_id="HEZ2129577.1"
                     /translation="MMGDSVIYYVEQADKPVNRAGERARKTFKYFWRELFWERRRIIP
                     ALDFAMVKAPFFQDGEDGEICEHMWIDDIYFDGLYIYGVLNNEPGELTNVEQGESVCV
                     PVDDISDWMFVCNGIPYGGFTIQAMRGQMTEEERTEHDAAWGIDFGDPGQVLLVYEEK
                     EHPENLEEHPMCRNCIDDFRQQLSQNPDFLHEQDEDGYTPLHHEAIAGNALMVQAMLE
                     YGANPASKTSEGYTALDFARLAGWQNVADLLEPRH"
     gene            1459..1800
                     /gene="fdx"
                     /locus_tag="WHR07_000310"
     CDS             1459..1800
                     /gene="fdx"
                     /locus_tag="WHR07_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009425374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HEZ2129578.1"
                     /translation="MPKITVLPHTTLCPEGAVIEDAPEGKTVLDVLLDHDIEVDHACE
                     KSCACTTCHVIIRKGFDSLEEPTELEEDLLDQAWGLEADSRLSCQAVVAGEDLIVEIP
                     KYTINHAREEH"
     gene            complement(2087..2674)
                     /locus_tag="WHR07_000311"
     CDS             complement(2087..2674)
                     /locus_tag="WHR07_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEZ2129579.1"
                     /translation="MNNMFAAKLSKLVYTASDHPDSLSEMEEFDRLILLIRKLYQILD
                     GQHILSRVTVCLHYRSRRGLIALDKAAAGCDAAMLRAQRWRIYTQIAERLAGSGGGFT
                     VTAESVSAACPELEGRYLELVRRTATSFGFVQVQEYPAGGQEETQAVPDAASDHSVRK
                     PIKINIEAKVERYPAYRPTAALKVTRRRFFRLQNR"
     gene            2887..3084
                     /gene="iscX"
                     /locus_tag="WHR07_000312"
     CDS             2887..3084
                     /gene="iscX"
                     /locus_tag="WHR07_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HEZ2129580.1"
                     /translation="MKWTDTRRIAEELYDLHGETIDPRTVRFTQLRDLIMALPEFDDD
                     PARCGERILEAVQQAWIDEAE"
     gene            complement(3152..3553)
                     /locus_tag="WHR07_000313"
     CDS             complement(3152..3553)
                     /locus_tag="WHR07_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEZ2129581.1"
                     /translation="MKDKHDSSAMRLDKWLWAARFFKTRSLAQKHIELGRVQVNGSKV
                     KNSKTIDIGDIIDLTLNSLPYKIKVKGLNHQRRPASEARLLYEEDAKTATLREERKQL
                     DQFSRITSAYPDGRPTKRDRRQLDRLKKGDW"
     gene            3764..4723
                     /locus_tag="WHR07_000314"
     CDS             3764..4723
                     /locus_tag="WHR07_000314"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HEZ2129582.1"
                     /translation="MKPVFLDFEQPIAELTNKIDELRFVQDESAVDISDEIHRLQKKS
                     NDLTKSIFSKLTPAQISQVSRHPQRPYTLDYIEALFTDFEELHGDRHFADDYAIVGGL
                     ARFNGQSVMVVGHQKGRDTKEKIRRNFGMPRPEGYRKALRLMKTAEKFGLPVMTFIDT
                     PGAYPGIGAEERGQSEAIGKNLYELTRLRVPVLCTVIGEGGSGGALAVAVGDYVNMLQ
                     YSTYSVISPEGCASILWKTAEKAADAAQALGITADRLQRLDLVDTVIKEPLGGAHRDF
                     GQTMKNVKAVLEKQLHEAQSIPLADLLSRRFDRIMAYGKFSEQ"
     gene            4791..6101
                     /gene="tilS"
                     /locus_tag="WHR07_000315"
     CDS             4791..6101
                     /gene="tilS"
                     /locus_tag="WHR07_000315"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEZ2129583.1"
                     /translation="MLTLDAFEQCLKDCFPQGLNGKKTAVALSGGLDSVVLLHLLVRA
                     GKRAGFVPEALHIHHGLSPRADDWADFCQNYCDMLGVGLETVKVCVEKNGLGIEAAAR
                     QKRYAAFAEKGFDILALAHHRDDQIETFMLAVARGGGLRALAAMPAVRPFGEKGIIWR
                     PLLPFSRQDIWDYAQKHGLPNIEDESNTDTAYLRNRFRHRILPELSAQIPHFGRHVLN
                     NVRALQEDLALLDEVVVQDCRWVCGAGYFDTARWLTFSPRRKTHILRHFLKENGIPVP
                     NQNALADIARVLTEAKTGRWNLQGFELHHYAGRLFVFRQEKTDKLRFLKDRQISGNLR
                     EILTGQGFVLKRHPFGLPEHLLEQDGILRTVAVSDTLAVGGIHKDVKKILQGKRVLPV
                     LRPIWPLVADSGNRPLALANCCADFQYSVSDGILPVHPDFPILF"
     gene            6175..6960
                     /locus_tag="WHR07_000316"
     CDS             6175..6960
                     /locus_tag="WHR07_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEZ2129584.1"
                     /translation="MRHISSTNNEHIRHLHRLLSQGKFRRQYAQTVLEGVHLLQVFLQ
                     SGGMPVGVYIPEGKMPSEEIRRLRAVVPEGRIFSVSDGILKKISSLSCADDILALIDI
                     PLGGTLPDKGDCVVLDGVQDPGNVGTVLRSAAAAGVGTVVLGRGCADAWSPKVLRAGM
                     GAHFLSGIYPQADLEIWLARYKGRVFATALREEKQAVLYGEDLCGPTAWVFGNEGAGV
                     GKAVLDRADKCVRIPMHDATESLNVAMAATICLFEQMRQRSAY"
     gene            6970..7167
                     /locus_tag="WHR07_000317"
     CDS             6970..7167
                     /locus_tag="WHR07_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129585.1"
                     /translation="MPSEKIYYGVLIFLCIASMLLSPFFYAGALKPKKAALRKDGQWK
                     LILLSNTVAAAVLAWVWWKWF"
     gene            7429..7782
                     /locus_tag="WHR07_000318"
     CDS             7429..7782
                     /locus_tag="WHR07_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129586.1"
                     /translation="MKNCEFFYDPTRAIYDSGADYLTREKHRLVVIANSAWGLLLNLS
                     CYYDEVLEKRKIPFGKQEIDDDMDKVSALKRKFKDISEIKVGDGWEYPFNYEQGMKEL
                     DEVLLKYIPFFEEER"
     gene            7794..8099
                     /locus_tag="WHR07_000319"
     CDS             7794..8099
                     /locus_tag="WHR07_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129587.1"
                     /translation="MRVSKIIGSMLLVTAVQTVFSANVYACRHNGKTSYSQTPGKHCT
                     NAGLGRDLVYSSVRPAVKDRAEDAGVGDYSDTVRDEHVQNPRENTHKDASNTGAKTH"
     gene            8161..9537
                     /gene="mpl"
                     /locus_tag="WHR07_000320"
     CDS             8161..9537
                     /gene="mpl"
                     /locus_tag="WHR07_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HEZ2129588.1"
                     /translation="MKHIHIIGIGGTFMGGIAAIAKEAGFEVSGCDAKMYPPMSTQLE
                     ALGIGVYEGFDTAQLDEFKADVYVIGNVAKRGMDVVEAILNRGLPYISGPQWLAENVL
                     HHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENFGVSARLPQTPRQDPN
                     SQSPFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFADLGAIQTQFHYL
                     VRTVPSEGLIVCNGRQQSLQDTLDKGCWTPVEKFGTEHGWQAGEANADGSFDVLLDGK
                     TAGRVKWDLMGRHNRMNALAVIAAARHAGVGIQTACEALGAFKNVKRRMEIKGTANGI
                     TVYDDFAHHPTAIETTIQGLRQRIGGARILAVLEPRSNTMKLGTMKSALPVSLKEADQ
                     VFCYAGGVDWNVAEALAPLGGRLHVGKDFDAFVAEIVKNAEAGDHILVMSNGGFGGIH
                     GKLLDALR"
     gene            9744..10796
                     /gene="bioB"
                     /locus_tag="WHR07_000321"
     CDS             9744..10796
                     /gene="bioB"
                     /locus_tag="WHR07_000321"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HEZ2129589.1"
                     /translation="MTVSPVALRRKTECKPHPTARYWKKCDVEALFGLPFLELVHQAA
                     EVHRQNFNPREIQLSTLLSIKTGGCPEDCAYCPQSAHHNTNLGKEQMMDVDEIVEKAK
                     IAKSRGASRFCMGAAWRGPKPKDVETVSAIIKAVKGLGMETCGTFGMLEEGMAEDLKE
                     AGLDYYNHNLDTDPDRYNDIIHTRRHEDRMDTLGKVRNAGLKVCCGGIVGMNETRAER
                     AGLIASLANLDPQPESVPINRLVKVEGTPLADAEDLDWTEFVRTIAVARITMPQSYVR
                     LSAGRSNMPEAMQAMCFMAGANSIFYGDKLLTTGNPDEDGDRILMEKLNLYPLQFELE
                     GEVAEVEKASGIKVDY"
     gene            complement(10875..11508)
                     /locus_tag="WHR07_000322"
                     /pseudo
     CDS             complement(10875..11508)
                     /locus_tag="WHR07_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575362.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
     gene            complement(11632..11871)
                     /locus_tag="WHR07_000323"
     CDS             complement(11632..11871)
                     /locus_tag="WHR07_000323"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129590.1"
                     /translation="MGGCTFFRRTAFVKQRAFEVADGNVRVLQGRFDVFQNIGIGQVI
                     DRIIAAEHNVAHADNGNGIGCLFVRRILSVHIAGI"
     gene            11831..12091
                     /locus_tag="WHR07_000324"
     CDS             11831..12091
                     /locus_tag="WHR07_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEZ2129591.1"
                     /translation="MTKAVRRKNVQPPKICYAFRTPSAYGQYLADAGFDYLSFANNHS
                     NDFGAQGITATAASGSSFTYSIALKPLPITRPKLRKIPPSPR"
     gene            complement(12154..14013)
                     /gene="ilvD"
                     /locus_tag="WHR07_000325"
     CDS             complement(12154..14013)
                     /gene="ilvD"
                     /locus_tag="WHR07_000325"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEZ2129592.1"
                     /translation="MPEYRSKTSTHGRNMAGARALWRATGVMETDFGKPIIAVANSFT
                     QFVPGHVHLHNMGQLVAREIEKAGAIAKEFNTIAIDDGIAMGHSGMLYSLPSRDLIAD
                     SIEYMVNAHCADALVCISNCDKITPGMLIAAMRLNIPTIFVSGGPMEAGKVIGVANIQ
                     PERRLDLIDAMIESADDNVSNRQVEEVEQNACPTCGSCSGMFTANSMNCLTEALGLSL
                     PGNGSYLATHVGRKELFLEAGRMIVEITKRYYEQNDETVLPRSIATKKAFENAMTMDI
                     AMGGSTNTILHLLAVANEAGVDFKMADIDRLSRVVPCICKTAPNNHDYYMEDVHRAGG
                     IFAILKELDKAGKLHTDVHTIHAPTLKDAIEKWDITNPENTRAIERFKAAPGGVRTTQ
                     AFSQNRMWKTLDLDREKGCIRDVAHAYSQDGGLAVLFGNIAERGCVVKTAGVDESILK
                     FTGRARVFESQEDAVEGILGNQIVAGDIVIIRYEGPKGGPGMQEMLYPTSYLKSKGLG
                     KACALLTDGRFSGGTSGLSIGHASPEAAEGGAIGLVHEGDTVEIDIPNRSIHLAISDE
                     ELAARRAEMEARGSKAWKPENRDRYVSAALRAYGAMATSADKGAVRDVAQIER"
     gene            complement(14186..15955)
                     /gene="cysI"
                     /locus_tag="WHR07_000326"
     CDS             complement(14186..15955)
                     /gene="cysI"
                     /locus_tag="WHR07_000326"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
                     /protein_id="HEZ2129593.1"
                     /translation="MTVQTKTKGLAWQEKPLSDNERLKTESNFLRGTILDDLKDPLTG
                     GFKGDNFQLIRFHGMYEQDDRDIRAERAEAKLEPLKFMLLRCRLPGGIIKPSQWIELD
                     KFARENSHYRSIRLTNRQTFQFHGVPKAKLQTMHRLLHKLGLDSIATAADMNRNVLCT
                     SNPIESELHRQAYEYAKKISEHLLPRTRGYLDVWVDGKKVQSSDDFLQEDEPILGKTY
                     LPRKFKTAVVIPPLNDVDCYGNDLDFVAVSDGNGQLAGFNVLAGGGLSMEHGNTKTYP
                     NISLELGFVPPEHALKAAEAVVTTQRDFGNRSDRKNARTRYTIQNMGLDNFRAEVERR
                     MGMPFEPIRPFKFTGRGDRIGWVKGIDGNWHLTLFIESGRLVDEGGKQLLTGVLEIAK
                     IHKGDFRITANQNLIVANVAEADKAKIEELARTYGLIRNDVSKLRENAMSCVSFPTCP
                     LAMAEAERVLPDFIGELDKIMAKHGTSDDYIVTRITGCPNGCGRAMLAEIGLVGKAVG
                     RYNLHIGGDREGVRIPRLYKENITLPEILSELDDLIGKWAAGRDTDEGFGDFAIRTGI
                     VKPVLDAPVDFWDASKAVPIARA"
     gene            complement(15982..17796)
                     /locus_tag="WHR07_000327"
     CDS             complement(15982..17796)
                     /locus_tag="WHR07_000327"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     flavoprotein subunit"
                     /protein_id="HEZ2129594.1"
                     /translation="MSEHDMQNTNPPLPPLPPEITQLLSGLDAAQWAWLSGYAWAKAG
                     NGASAGLPALQTALPAAEPFSVTVLSASQTGNAKSVADKASDSLEAAGIQVRRAELKD
                     YKAKNIADERRLLLVTSTQGEGEPPEEAVVLHKLLNGKKAPKLDKLQFAVLGLGDSSY
                     PNFCRAGKDFDRRFEELGAKRLLERVDADLDFAAAADGWTGRIVARLKEEAAKNRATP
                     APQTTPPAGLQTAPDGRYCKADPFPAALLANQKITARQSDKDVRHIEIDLSGSDLHYL
                     PGDALGVWFDNDPALVREILDLLGIDPATEIQAGGKTLPVASALLSHFELTQNTPAFV
                     KGYAPFADDDELDRIAADNAVLQGFVQSTPIADVLHRFPAKLTAEQFAGLLRPLAPRL
                     YSISSSQAEVGDEVHLTVGAVRFEHEGRARAGGASGFLADRLEEDGTVRVFVERNDGF
                     RLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAEGKNWLIFGNPHFARDFLYQTEWQ
                     QFAKDGFLHRYDFAWSRDQEEKIYVQDKIREQAEGLWQWLQEGAHIYVCGDAAKMAKD
                     VEAALLDVIIGAGHLDEEGAEEYLDMLREEKRYQRDVY"
     gene            complement(17793..19079)
                     /locus_tag="WHR07_000328"
     CDS             complement(17793..19079)
                     /locus_tag="WHR07_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit 1"
                     /protein_id="HEZ2129595.1"
                     /translation="MTAQHQAPLRFITAGSVDDGKSTLIGRLLYDSKALLSDQIKTLE
                     SGKSKGLKETIDFSILTDGLEAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRN
                     MVTGASTASAAVVLVDASQLDFGAQPLQLLPQTKRHSAILRQLNCPHIVVAVNKMDLL
                     DYSEDKFNAIVEAYRRLAEQLGLKDVHFVPVSALLGDNLVYPGGNMPWYRGEPLLVIL
                     ENLPGADETGRSAADFYFPVQLVVRQDADKADDFRGYQGRIERGSVAVGQTVRIEPNG
                     LTAEVSEIITPKGEVAQAFAGEAATLRLDRDIDVSRGDLFVDKNSPLAPQKHLEATLC
                     WFDERPLNTARKYLLKHGTQTVPAKVGEIESVLDVRTLEQEAGAESLKMNDIAKVRIN
                     LQKPVTATPYAENTAAGSFILIDEATYGTVAAGMIL"
     gene            complement(19118..20041)
                     /gene="cysD"
                     /locus_tag="WHR07_000329"
     CDS             complement(19118..20041)
                     /gene="cysD"
                     /locus_tag="WHR07_000329"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HEZ2129596.1"
                     /translation="MTKTEPNNVQLDWLESESIHIIREVAAECENPALLFSGGKDSVV
                     LLALACKAFRLGSRPVKLPFPLVHIDTGHNYPEVIAFRDAQAAKLNARLIVGRVEDSI
                     AKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEKARAKERIFSFRDEF
                     GQWDPKAQRPELWSLYNTRLHKGENMRVFPISNWTELDIWQYIARENLELPPIYYSHR
                     REVVRRRGLLVPVTPLTPKMPSETSEILDVRFRTVGDISCTCPVESTASTPAEIIRET
                     AVADISERSATRLDDQASEAAMEKRKKEGYF"
     gene            complement(20079..20813)
                     /locus_tag="WHR07_000330"
     CDS             complement(20079..20813)
                     /locus_tag="WHR07_000330"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HEZ2129597.1"
                     /translation="MKIFKPALWKIPPIENGSETALAEKTETLKQRLHRIAGSHRDAR
                     FASSLAAEDMVITDLIAGENLNIGIFTLDTGLLHAETLNLLDRIERVYPHMQIKRFQP
                     IREDALHYVESKGRFAFYDSVEARRECCRIRKTEPLDRAIAGADAWLTGQRREQSATR
                     TELPFAEYDAGRGIDKYNPIFDWSEHDVWAYILANNVPYNDLYRQGFPSIGCDPCTRP
                     VKAGEDIRAGRWWWEDKNSKECGLHK"
     gene            complement(20829..22280)
                     /gene="cobA"
                     /locus_tag="WHR07_000331"
     CDS             complement(20829..22280)
                     /gene="cobA"
                     /locus_tag="WHR07_000331"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HEZ2129598.1"
                     /translation="MNYFPIFANLAGRPVLVVGGGAVAARKISLLLKAGAEVRVAAKH
                     LNAELSALAAENKILWLAEEFRAEHIRTVFLIIAASSDQALNRRVFHLAESCQKPVNV
                     VDDRDHCSFIFPSVIDRNPVQIAVSSSGSAPVLARLLRERLEALLPPSLGDMAEISGR
                     WRDAVKGKLKSVTERRRFWEKQFNGRFAALVKNRQNTLAERELAKQLEQNYQGGFVSL
                     VGAGPGDAGLLTLKGLQEIQQADVVLYDALVSDGILSLVRRDAERIFVGKRARGGRTP
                     QEDTNALMVRLAREGRRVVRLKGGDPFVFGRGGEELETLARHQIPFSVVPGITAAVGA
                     TAYAGIPLTHRDYAQSAVFVTGHRKADAPDIEWQTLARSRQTLVIYMGALKAALIAER
                     LQQHGRSPDTPAAVISQGTLPAQKTATGTLANLAELAETAPNPALIVIGEVVGLHEKL
                     AWFGENAKKESNPAEHAYFALDGLGTGQEQQAA"
BASE COUNT         4848 a         5830 c         6460 g         5312 t
ORIGIN      
        1 tataaaatcg gcatttcgga tgtaagcaat tttgaaggca gaatgcgcca tttggaaaac
       61 aacggctatg cgaacgttgc cggattggaa cgcatcctcg ccgtcaaaac cgacaattac
      121 aaagaaaaag aaaacctgct ccatgaaatt ttcagcaaaa gcaggatagg cgataccgaa
      181 ttgttcgccg tggacgaaaa ccttgtaaaa cgtttgtttt tatcgcttcg cggcgaaatc
      241 gtgtttccga aaaacgaaac ggcggaatcg gaatttgaaa aaagcgtcca cgaacgcagg
      301 caggaaggga atgccgggtc cggccgcaaa caactgcttg atttggtacg gcgcggacac
      361 cgggaatacc cttacgcgct gccccggctt ttggcgggcg cggcatccta caagccgaaa
      421 aaatcgaaaa tccgcctttt taaagaagca tatttcggca aaagcggcac gaggctgacc
      481 gacgaaattg cagacggcat ccatatttac acctgttttt cgcgggcgga tttggaaaaa
      541 gcctattccg aatatttgga acttttcaaa tccgaatcgg atgccgaagg cagaaagccg
      601 cagtaaggtg caaacagata ccgtacacgt tgaggagcag atatgatggg cgattccgtc
      661 atttattatg tagaacaggc agacaaaccg gtaaaccgtg ccggcgaacg cgcccgcaaa
      721 acattcaaat atttttggcg cgagcttttt tgggaacgcc gccgcatcat tcccgcctta
      781 gattttgcca tggtcaaagc cccttttttc caagacggcg aagacggcga aatttgcgaa
      841 catatgtgga tcgacgatat ttattttgac ggtctttaca tttatggcgt gctgaacaat
      901 gaacccggcg aactgaccaa tgtcgaacaa ggcgaaagcg tttgcgttcc ggttgacgac
      961 atcagcgact ggatgttcgt gtgcaacggc attccctacg gcggctttac catacaggca
     1021 atgcgtggac agatgacgga agaggagcgt accgaacacg atgccgcatg gggaatcgat
     1081 ttcggcgatc ccgggcaggt attgctggtg tatgaagaaa aagaacatcc cgaaaatctg
     1141 gaagagcatc cgatgtgccg gaactgtatt gacgattttc ggcaacagtt gtcccaaaat
     1201 ccggattttc tgcatgagca ggacgaagac ggctatacgc cgcttcatca tgaagccatc
     1261 gcaggaaatg cacttatggt tcaagccatg cttgaatacg gcgcaaatcc tgcctcaaag
     1321 acatcggaag gctataccgc cctcgatttt gcccgcctgg cgggctggca aaatgttgcc
     1381 gacctgctcg aaccgcgaca ttaggcggac agttttccga aaacgaacac aaacactttt
     1441 tacagaaaga caataaaaat gcccaaaatc accgtacttc cacacacgac attatgcccc
     1501 gaaggcgcgg ttatcgaaga cgcgcccgaa ggcaaaaccg tccttgacgt gctgctcgac
     1561 catgatatcg aagtcgatca cgcctgcgaa aaatcctgcg cctgcaccac ctgccacgtc
     1621 atcatccgca aaggtttcga cagtttggaa gaaccgaccg aattggaaga agacctgctc
     1681 gaccaggctt ggggtttgga agccgattca cgcctgagtt gtcaggcggt tgtcgccggc
     1741 gaggatttga ttgtggaaat ccccaaatac accatcaacc acgcgcgcga agaacactga
     1801 aaacaggccg tctgaagccg gcacgcttca gacggcattg ttgcgcggat aaggcgcaat
     1861 cgcccgaaaa caggcgttcg tacaggcgga actttcgatt ctatagtgaa ttaacaaaaa
     1921 tcaggacaag gcggcgagcc gcagacagta ccaatagtac ggcaaggcga ggcaacgctg
     1981 taccggttta aatttaattc actatatatt gatttttatc ggttttctga cggaacggat
     2041 tggtgcggca tccgaggcgg attactcggg cgcgatgcac gggtatttat cggttttgca
     2101 gccggaaaaa ccgccggcgg gttactttca gggcggcggt cgggcggtat gccggatagc
     2161 gttccacttt cgcttctata ttgattttga ttggttttct gacggaatga tccgatgcgg
     2221 catccgggac ggcttgtgtt tcttcctgcc cgcctgccgg atattcctgt acttgcacga
     2281 aaccgaaaga ggtggcggtg cggcggacaa gctcgagata gcgtccttca agctccggac
     2341 aggcggcgga cacgctttct gccgtaaccg tgaagccgcc gcccgacccg gcaaggcgtt
     2401 ccgcaatctg cgtgtagatg cgccaacgtt gggcgcgcaa cattgccgca tcgcaaccgg
     2461 cagccgcttt atccaaggca atcagaccgc gcctgctccg gtagtgaagg caaaccgtta
     2521 ctctggagag gatatgttgc ccgtccaata tttgatacag tttgcgtatc agcagaatca
     2581 ggcggtcaaa ctcctccatc tccgacaggg aatcaggatg gtcggaagcg gtataaacca
     2641 gtttggacaa ttttgcggca aacatattgt tcatcaatct tccttgtcgg ttgaaacccc
     2701 gctcttcggg gcggtagaat cagatttgtt tgggagggac aactcctccc agatcaggac
     2761 gacacatagg ctggtgcttg atgtgttgtc cggcgagttg aaacattcag ccatcctcaa
     2821 ggtgcggcag ttttgccgaa acatattcta cacggcttca atgccggacg ataaaaggaa
     2881 attcatatga aatggaccga cacccggcgt atcgccgaag aactctatga cctgcacggc
     2941 gaaaccatcg atcccagaac cgtgcgcttt acccaactgc gcgacctgat tatggcattg
     3001 cccgaatttg acgacgaccc cgcccgttgc ggcgaacgca tcctcgaagc cgtgcagcag
     3061 gcatggatag acgaggcgga ataagtttcg ggaatgccgt ctgaaatgcg gcggtacgcg
     3121 gttcgtgctt ctgtttgcag cgggaatggt tttaccagtc tccttttttc agcctgtcca
     3181 gttggcggcg gtcgcgcttg gtcggtctgc cgtcgggata ggcggaagtg atgcggctga
     3241 attggtcgag ctgtttgcgc tcttccctca atgttgccgt tttcgcgtcc tcttcataca
     3301 gaagccgcgc ctcggatgcc gggcggcgtt ggtggttcaa acctttaacc ttgattttat
     3361 agggaaggga attgagcgtc aggtcgataa tatcgccgat gtctatggtt ttactgtttt
     3421 tgaccttcga gccgtttact tgaaccctac ccagttcgat gtgcttttgc gcaagggaac
     3481 gggtcttgaa aaaacgtgcc gcccaaagcc atttgtccag ccgcatggcg gaagaatcgt
     3541 gcttgtcttt catacgattt tgtttgaaat aattgaattt gtttcaagtt tagcataaga
     3601 tacgccgcct ataactagta tatatgcact aatccactgt tttccatgct gtccgaacac
     3661 aaaaagaggg tatggaaaag ccgttttgga caataaatta actgcggaat atgcacaaat
     3721 agcgtatgat agcggcagaa tctgttgatg agagcttcat tctatgaaac ctgttttttt
     3781 ggattttgaa caacccatag ccgaactgac caacaaaatc gatgagctgc gtttcgtcca
     3841 agacgagtct gccgtcgata tttcggacga aatacaccgt ttgcagaaaa aaagcaacga
     3901 tttgaccaag tctattttca gtaaacttac acccgcccaa atttcacagg tttcccggca
     3961 tccgcagcgt ccctatactt tggattacat tgaggcactg tttaccgatt ttgaagaact
     4021 gcacggcgac cgccactttg ccgacgatta tgcgattgtc ggcggattgg cgcgtttcaa
     4081 cggacaaagc gtgatggtcg tcgggcatca gaaagggcgc gacaccaaag aaaaaatccg
     4141 ccgcaacttc ggtatgcccc gtcctgaagg ctaccgcaaa gccctgcgcc tgatgaagac
     4201 ggcagaaaaa ttcggcttgc ccgtcatgac ctttatcgat acgccgggcg cgtatcccgg
     4261 catcggcgcg gaagaacgcg ggcagtcgga agccatcggc aaaaacctgt acgaactgac
     4321 acgcctgcgc gttcctgttt tgtgtaccgt catcggcgaa ggcggttcgg gcggtgcgtt
     4381 ggcggtcgcc gtaggcgatt acgtcaatat gctgcaatat tcgacctatt ccgttatttc
     4441 ccccgaaggc tgcgcgtcta ttttgtggaa aacggcggaa aaggcggcgg atgcggctca
     4501 ggctttgggc attaccgctg accggctgca aaggctggac ttggtcgata ccgtcatcaa
     4561 agaaccattg ggcggtgcgc atcgggattt cgggcaaacc atgaaaaacg taaaagccgt
     4621 tttggaaaaa caactgcacg aagcgcaaag catcccgctt gccgatttgc tttcgcgccg
     4681 tttcgaccgc attatggctt acggcaaatt ttcggaacaa taattcaggt agaacaagca
     4741 gcaagcagtt tgtctgaaac tgcttgcttt ttctttatcg ggacggaacc gtgctgactt
     4801 tagatgcgtt tgagcaatgc ttgaaggatt gttttcctca aggtctgaat ggaaaaaaaa
     4861 cagcggtggc attaagcggc ggcttggatt ccgtggtctt gctgcacctg cttgtccgcg
     4921 ctgggaaacg ggcaggattt gtgccggagg cattgcatat ccatcacggc ttgagccccc
     4981 gtgccgacga ttgggcggat ttctgtcaaa actattgcga tatgctaggg gtggggctgg
     5041 aaacggttaa ggtctgcgtg gaaaaaaacg gtttgggcat cgaagcggcg gcgcggcaaa
     5101 agcgttatgc cgcgtttgcc gaaaaaggct ttgacatttt ggcgttggcg caccacaggg
     5161 acgatcaaat cgaaaccttt atgctggcgg tcgcgcgcgg cggcggtttg cgcgctttgg
     5221 cggctatgcc cgccgtccgc ccttttgggg aaaaaggcat catttggcgg cccttgctgc
     5281 ctttttcgcg ccaagatata tgggattatg cccaaaaaca cggtttgccg aatatcgagg
     5341 atgaaagcaa taccgatacg gcttatttgc gaaaccgctt ccggcaccgt attttgcccg
     5401 aactttcggc gcagattccc catttcgggc gacatgtgct gaacaatgtc cgcgctttgc
     5461 aggaagattt ggctttgttg gacgaggtcg tcgttcagga ctgccgttgg gtttgcgggg
     5521 ccggttattt cgatacggcg cggtggctga cgttttcccc gcgccggaaa acccatattt
     5581 tgcggcattt tctgaaggaa aacggcattc ccgtgccgaa tcagaatgcc cttgccgaca
     5641 ttgcccgggt tttgacggag gcaaaaaccg gacgttggaa cttgcaaggc tttgaattgc
     5701 atcattatgc aggcaggctg tttgtgttcc gacaggaaaa aacggataaa ctgcggtttt
     5761 tgaaagacag gcagataagc ggaaatttaa gggaaatatt gacggggcag ggatttgttt
     5821 taaaacgtca tccgtttggg cttcctgagc atcttttgga gcaggacgga attttgagga
     5881 cggtagcggt atcggatacg ttggctgtcg gcggcatcca taaggatgtg aaaaaaatcc
     5941 ttcaggggaa acgggttttg cctgtcctgc gcccaatttg gccgcttgtt gccgacagcg
     6001 gaaaccgtcc attggcgttg gcaaactgtt gtgcggattt ccaatactcg gtttcagacg
     6061 gcattttgcc cgtccatcct gactttccca ttttattttg ataatatcgc aaacagattt
     6121 cggcggcgtt cagtcgggta ttgtccggtt gcatatttct aaaaggcttg tgaagtgaga
     6181 cacatcagtt cgaccaataa tgaacacatc cggcacctgc accgcctgtt gtcgcaagga
     6241 aagttcagac ggcaatacgc ccaaaccgtt ttggagggcg tgcacctgct tcaggttttc
     6301 ctgcaatccg gcgggatgcc ggtcggggta tatattcccg agggcaaaat gccgtctgaa
     6361 gaaatccgca ggctgagggc ggttgtgccg gaaggcagga ttttttccgt ttcagacggc
     6421 atattgaaaa aaatcagtag cttgagttgt gcagacgata tacttgcact gattgatatc
     6481 ccattgggcg gaaccttgcc ggacaaaggc gactgtgtgg ttttggacgg cgtgcaagat
     6541 ccgggcaatg tcggcaccgt cttacggagt gcggcggcgg caggggtagg tacggtcgtt
     6601 ttgggcaggg gttgcgcgga cgcgtggtcg cccaaggtat tgcgcgcggg gatgggcgcg
     6661 catttcttgt cgggcattta tccgcaggcg gatttggaaa tatggttggc gcgctataaa
     6721 ggccgtgtgt ttgccaccgc cttgcgcgag gaaaagcagg cggttttgta cggcgaagat
     6781 ttgtgcggac cgacagcctg ggtgtttggc aacgaaggcg cgggggtcgg taaagcggtt
     6841 ttggacaggg cggacaagtg tgtcaggatt ccgatgcacg atgcaaccga gtctttaaat
     6901 gtcgcgatgg cggcgacaat ctgcctgttt gaacagatgc ggcagcggtc ggcgtattga
     6961 ggaaaagaaa tgccgtctga aaaaatctat tacggcgtat tgattttctt atgtatcgct
     7021 tctatgctgc tgtcgccgtt tttttatgcg ggtgctttga agcccaagaa ggcggcattg
     7081 cggaaggacg ggcagtggaa actcatctta ttgtccaata ccgtggcggc ggcggttttg
     7141 gcttgggtgt ggtggaaatg gttttgacag atattgctca aaatcgtgct aatggaatcc
     7201 gaacaaataa agaatttggt aaaaaatttg ttaaatcaac gaattaaagt tttgtggaaa
     7261 acaaaacagc tctaagcaaa tagggcgttt gtcggtaaat acggaagagt tgcggcatta
     7321 tcgggcatct ttaacaagta gtgccgtctt ggcaggcaat tggtttttat gggcagcttg
     7381 caaaatcgcg gatataaaat tgcgaatcgg ttaaagtgtg gggacgctat gaaaaattgc
     7441 gaattttttt atgacccgac aagggcaatc tatgatagcg gtgcagatta cttaactagg
     7501 gaaaaacata gattagtcgt aattgcaaat agtgcttggg ggctattgct taatttatct
     7561 tgttattatg acgaggtttt ggaaaagcgg aaaataccgt tcggcaaaca ggaaattgat
     7621 gacgatatgg acaaagtgtc cgcccttaag cggaagttta aagatatttc tgaaatcaaa
     7681 gtaggggatg gttgggaata cccgttcaat tatgagcagg gaatgaaaga attagatgaa
     7741 gtgctattga aatacattcc cttttttgaa gaagaacgat aaaggaggtt gatatgcgcg
     7801 tatctaaaat aattggaagt atgttgcttg ttacagcggt tcagaccgta ttttcggcaa
     7861 atgtttacgc gtgccgccat aatggtaaaa ccagttacag ccaaactccg ggaaaacatt
     7921 gtaccaacgc gggtttgggg cgggacctgg tgtacagttc ggttagaccg gcagtaaaag
     7981 acagggcgga agacgcaggg gtcggcgatt attcggacac ggtgagggac gaacacgtcc
     8041 aaaatccgag agagaatacg cataaggatg cttcgaatac cggtgcaaag acgcattgat
     8101 tgaaaccgaa tcagccatga cggcgttgaa taatagaatt tgaacgatta gggaactctg
     8161 atgaaacaca tccacattat cggtatcggc ggcacgttta tgggtgggat tgccgccatt
     8221 gccaaagaag cagggtttga agtcagcggt tgcgatgcga agatgtatcc gccgatgagc
     8281 acccagctcg aagccttggg cataggcgtg tatgaaggct tcgacaccgc gcagttggac
     8341 gaatttaaag ccgacgttta cgttatcggc aatgtcgcca agcgcgggat ggatgtggtt
     8401 gaagcgattt tgaaccgtgg gctgccttat atttccggcc cgcaatggct ggctgaaaac
     8461 gtgctgcacc atcattgggt actcggcgtg gcggggacgc acggcaaaac gaccaccgcg
     8521 tctatgctcg cgtgggtttt ggaatatgcc ggactcgcac cgggcttcct tatcggcggc
     8581 gtaccggaaa atttcggcgt ttccgcccgc ctgccgcaaa cgccgcgcca agacccgaac
     8641 agccaatcgc cgtttttcgt tatcgaagcc gacgaatacg acaccgcgtt tttcgacaaa
     8701 cgctccaaat tcgtgcatta ccgtccgcgt accgccgtgt tgaacaatct ggaattcgac
     8761 cacgccgaca tctttgccga cttgggcgcg atacagaccc agttccacta cctcgtgcgt
     8821 accgtgccgt ctgaaggctt aatcgtctgc aacggacggc agcaaagcct gcaagatact
     8881 ttggacaaag gctgctggac gccggtggaa aaattcggca cggaacacgg ctggcaggcc
     8941 ggcgaagcca atgccgacgg ctcgttcgac gtgttgctcg acggcaaaac ggccggacgc
     9001 gtcaaatggg atttgatggg caggcacaac cgcatgaacg cgctcgccgt catcgccgcc
     9061 gcgcgtcatg ccggtgtcgg cattcagacg gcctgcgaag ccttgggcgc gtttaaaaac
     9121 gtcaaacgcc gcatggaaat caaaggcacg gcaaacggca tcaccgttta cgacgacttc
     9181 gcccaccacc cgaccgccat cgaaaccacg attcaaggtt tgcgccaacg tatcggcggc
     9241 gcgcgtatcc tcgccgtcct cgagccgcgc tccaacacca tgaaactcgg cacgatgaag
     9301 tccgccctgc ctgtaagcct caaagaagcc gaccaagtgt tctgctacgc cggtggcgtg
     9361 gactggaacg tcgccgaagc cctcgcgcct ttgggcggca ggctgcacgt cggcaaagac
     9421 ttcgatgcct tcgttgccga aatcgtgaaa aacgccgaag caggcgacca tattttggtg
     9481 atgagcaacg gcggtttcgg cggaatacac ggaaagctgc tggacgcttt gagatagccc
     9541 gggcgatgcc gtctgaaagc ccttcagacg gcatcgtccg gctgcgcggc acaaaggcgg
     9601 aaaaaccgtt tgccccgtat tttcaaacgc gttacacttg ccgccgctgt tttcagccat
     9661 ttgattaccc gcaaccgccg tcattgcgcc ggcggtttgc ctgtcagcgt cattgcgccg
     9721 ctgtaaatac gaaagaacac attatgaccg tatcccccgt cgccttgcgc cgtaagaccg
     9781 agtgcaagcc tcatcccacc gcgcgctatt ggaaaaaatg cgatgtcgag gcacttttcg
     9841 gactgccgtt tttagaactt gtccatcagg cggcagaagt ccaccgccaa aatttcaacc
     9901 cgcgcgaaat ccagctttcc acgctgttgt ccatcaaaac cggcggttgt cccgaagatt
     9961 gcgcctactg tccgcaatcg gcgcaccaca ataccaatct gggcaaagag cagatgatgg
    10021 atgtggatga aatcgtcgaa aaagccaaaa tcgccaaatc gcgcggcgca agccggtttt
    10081 gtatgggcgc ggcatggcgc ggccccaaac ccaaagacgt ggagacggtt tccgcaatca
    10141 tcaaagccgt caagggcttg ggtatggaaa cctgcggcac gttcggtatg ctcgaagaag
    10201 gtatggcgga agacttgaaa gaggcgggct tggattatta caaccacaac ctcgacaccg
    10261 accccgaccg ctacaacgac atcatccata cacgccggca tgaagaccgt atggacacct
    10321 tgggcaaagt ccgcaacgcc ggtttgaaag tctgctgcgg cggcatcgtc gggatgaacg
    10381 aaacccgcgc cgaacgcgca gggctgattg ccagcctcgc caacctcgac ccgcagcccg
    10441 aaagcgtgcc gattaaccgg ttggtcaaag tggaaggtac gccgcttgcc gatgccgagg
    10501 atttggactg gacggaattt gtccgcacca tcgccgtggc gcggattacg atgccgcaaa
    10561 gttatgtccg actgtcggca gggcgcagca atatgccgga agcgatgcag gcgatgtgct
    10621 ttatggcggg cgcgaactcg attttttacg gcgacaagct gctgaccacg ggcaatccgg
    10681 atgaagacgg cgacagaatc ctgatggaaa agctcaacct gtatccctta cagtttgagc
    10741 tggaaggcga ggtcgccgaa gtggaaaaag cctctgggat taaagtggat tattgacgat
    10801 tgcaaaaatg ccgtctgaaa cccgaaaaaa ggctttcaga cgacatttgt tcggacggta
    10861 tttccaatat ctttttaccg gcgcgtgatg ttgccgtcgg gcgagacatc cagcccgttc
    10921 ccgttgggga agtcgctgcg gttcagataa ataatccgcc cgataacggt ttttcagggt
    10981 cgattttggg gattttatcg tcggcttggg taatagggat gatagttccg gaaataaatt
    11041 taccctgttt gttggtgata attttgaaaa tcggcgcaat gccgctgatg ccggaggtgt
    11101 tgattgcgcc gtaggtggca aagttgccgc cgctgtaaga gatgaagcgg tcgcggtaaa
    11161 gttcgacggc gcgtgtaacg tgcggcccct gcccgaatac gacatccgcg ccggaatcga
    11221 cggcaagccg tgcaaactcg acgacgttgc ccctgttttc cccatagaag atttcggtat
    11281 cgaacggcag gtgttccgcc tgtttccctt cccgccgccg tggaacatta caatgacgat
    11341 gtcggctttc tgtttggttt tggtaatccg ttttctaact ttggcataat cgttcagttt
    11401 gacggcggca aggttggggg cgaaggagac gaagccggat cttacgccgt ttttcttcag
    11461 gatggcggtt tcaaacctgt tttcgatgcc cgaatatttg atgttcaatt cgtcaaggtt
    11521 cgccctttat gccgtttccg caccgcaaac cgccggggtc aagccctcgg cgcatcctgc
    11581 cggaacggaa tccccgtgct gccgattgac ggttcaaacc ccgcgcccgt ttcaaatacc
    11641 ggcgatgtgg acggacagga tgcgcctgac gaaaagacag ccgataccgt ttccattatc
    11701 ggcgtgggcg acattatgct cggcagcaat tatccggtcg attacctgcc cgataccaat
    11761 attctgaaaa acgtcgaatc tgccttgcaa gacgcggaca ttaccgtcgg caacctcgaa
    11821 ggcacgctgt ttgacgaagg cggtacgccg aaaaaatgtg caacccccca aaatatgcta
    11881 tgcattccga acgccctccg catacgggca ataccttgcc gacgcgggat tcgactacct
    11941 cagcttcgcc aacaaccaca gcaacgactt cggcgcgcaa ggcatcacgg caacggcggc
    12001 gagcggcagc tcttttacat actcgatcgc gctaaagccg ctgccgataa cgaggccaaa
    12061 attgcggaaa ataccgccat cgcccagata aatttgtcca tcatcagacc tttactgttc
    12121 agacgagaca gcatttgccg cacgttttgg ggcttatctt tcgatttgcg ctacgtcgcg
    12181 caccgcgcct ttgtcggcgg aagtcgccat cgcgccgtaa gcacgcaggg ctgcggagac
    12241 gtagcggtcg cggttttccg gtttccacgc tttgctgccg cgcgcttcca tttcggcacg
    12301 gcgggcggca agctcttcat cggaaatggc aaggtggatg ctgcggttgg ggatgtcgat
    12361 ttcgacggta tcgccttcgt gtaccaaacc gatcgcgcca ccttccgccg cttcgggcga
    12421 ggcgtgtccg atggacaaac ctgatgtgcc gccggagaag cgtccgtcgg ttaagagagc
    12481 gcaggctttg ccgaggcctt tagatttcag gtaggaagtc ggatacagca tttcctgcat
    12541 gcccgggccg cctttcgggc cttcgtagcg gatgatgacg atgtcgccgg cgacgatttg
    12601 gttgcccaaa atgccttcta ctgcgtcttc ttggctttca aacacgcggg cgcggccggt
    12661 gaatttgagg atgctctcgt ccacgcctgc ggtttttacc acgcagccgc gctcggcgat
    12721 gttgccgaac aagaccgcca aaccgccgtc ttgcgagtag gcgtgtgcca cgtcgcggat
    12781 acagcctttt tcgcggtcga ggtcgagggt tttccacata cggttttgcg agaacgcttg
    12841 ggtggtgcgt acgccgccgg gcgcggcttt gaagcgttcg atggcgcggg tgttttcagg
    12901 gttggttatg tcccattttt caatcgcgtc tttcagcgtc ggtgcgtgga tagtgtgcac
    12961 gtcggtgtgc agcttgcccg ctttgtccaa ttctttcagg atggcgaaaa tgccgccggc
    13021 gcggtgcacg tcttccatat agtagtcgtg gttgttgggt gcggttttgc agatgcaggg
    13081 cacaacgcgg cttaagcggt caatgtcggc cattttgaaa tcgacaccgg cttcgttggc
    13141 aacggccaac aggtgcaaaa tggtattggt gctgccgccc atcgcaatat ccatcgtcat
    13201 agcgttttca aacgcttttt tggtggcaat gctgcgcggt aacacggttt catcgttttg
    13261 ctcgtaatag cgtttggtga tttcgacaat catacggccg gcttcgagga acagttcttt
    13321 gcggccgacg tgggtcgcca aatacgaacc gttgccgggt agggacagac cgagtgcttc
    13381 ggtcaggcag ttcatcgagt ttgccgtaaa catacccgaa cacgagccgc aggtcgggca
    13441 ggcgttttgt tcgacttcct cgacttgccg gttgctgaca ttgtcgtccg ccgattcaat
    13501 catcgcgtca atcaagtcca aacggcgttc gggctggatg tttgccacgc cgataacttt
    13561 acctgcttcc atcggaccgc cggaaacgaa gatggtcggg atgttcaggc gcatcgcggc
    13621 aatcagcatg cccggggtga ttttgtcgca gttggaaatg cacaccagcg cgtcggcgca
    13681 gtgggcattg accatatatt cgatggagtc ggcaatcaaa tcgcggctgg gcagggaata
    13741 cagcataccg ctgtgtccca tagcgatgcc gtcgtcgatg gcgatggtgt tgaattcttt
    13801 ggcgatggcg cccgcctttt cgatttcgcg ggcaaccagc tggcccatat tgtgcaggtg
    13861 gacatggccg ggcacgaatt gggtgaagga gttggcaacg gcgatgatgg gcttgccgaa
    13921 gtcggtttcc atcacgccgg tggcgcgcca caatgcacgt gcgcccgcca tattgcggcc
    13981 gtgggtggag gttttggagc ggtattctgg catagtgtgt ttccttgtct gctatgccgt
    14041 ctgaacggca aaaggctttc agacggcatt tttgttgtgt tttgaaatga aaaaaaaggt
    14101 attttatacc aagtatcgga attttgcgga atggaaacgc gtgcggcaaa aaaggacatc
    14161 ccccgcagga atgcggggga cggtttcagg cgcgcgcaat cgggacggct ttggatgcgt
    14221 cccaaaaatc gacgggcgca tccaacacgg gtttgacgat gcccgtccgt atggcgaaat
    14281 cgccgaaacc ttcgtcggta tcgcgtcccg ccgcccattt gccgatcagg tcgtctaatt
    14341 cggaaaggat ttccggcagg gtaatgtttt ctttgtagag tcgggggatg cgtacgcctt
    14401 cgcggtcgcc gccgatgtgg aggttgtagc gtccgacggc tttgccgacc agtccgattt
    14461 ccgccaacat cgcccgtccg cagccgttcg ggcagccggt aatgcgggta acgatgtagt
    14521 cgtccgacgt gccgtgtttc gccataatct tatccagctc gccgatgaag tccggcagca
    14581 cgcgttcggc ttccgccatt gccagcgggc aggtcgggaa ggaaacgcac gacatcgcat
    14641 tttcacgcag tttactgaca tcgttgcgga ttaatccgta tgttcgggca agttcttcga
    14701 tttttgcttt gtctgcttcg gcgacatttg ccacgatgag gttttggttg gcggtgatgc
    14761 ggaaatcgcc tttgtggatt ttggcgattt ccaacacgcc ggtcagcagc tgtttcccgc
    14821 cttcgtcaac caaacgcccg ctttcgatga aaagggtcaa atgccagttg ccgtctatgc
    14881 ctttcaccca gccgatacgg tcgccgcgcc cggtaaattt gaacgggcgt atgggttcga
    14941 acggcatacc catacggcgt tcgacttccg cgcggaagtt gtccaagccc atattttgaa
    15001 tggtgtagcg ggtgcgggcg tttttgcggt cgctgcggtt gccgaagtcg cgctgcgtgg
    15061 ttaccaccgc ttcggcggcc ttcagcgcgt gttccggagg cacgaaaccc agttccagtg
    15121 aaatgttcgg ataggttttg gtgttgccgt gttccatcga aagcccgccg cctgccaaaa
    15181 cattgaagcc ggcaagctgt ccgttaccgt ctgaaacggc gacgaaatcc aaatcgttgc
    15241 cgtagcagtc cacatcgttc aagggcggga tgacgactgc ggttttgaat ttgcgcggca
    15301 gataggtttt gcccaaaatc ggctcgtctt cttgaaggaa gtcgtcggaa ctttgaactt
    15361 ttttgccgtc cacccacaca tccagataac cgcgcgtgcg cggcagcaag tgttcggaaa
    15421 tctttttcgc gtattcgtaa gcctgccggt gcagttcgga ctcgatcggg ttggacgtgc
    15481 aaagcacgtt gcggttcata tccgctgccg tggcgatgga atccaaaccc agtttgtgca
    15541 agaggcggtg catcgtctgc aacttggctt tcggcacgcc gtgaaattgg aaggtttgcc
    15601 ggttggtcag ccggatggag cggtaatgac tgttttcccg ggcaaatttg tccagttcta
    15661 tccattggga cggtttgatg atcccgcccg gcagccggca gcgcaaaagc ataaatttca
    15721 agggctcgag ttttgcctcg gcgcgttcgg cgcggatgtc gcggtcgtcc tgctcataca
    15781 taccgtggaa gcggatgagt tggaagttgt cgcctttgaa gccgcccgtg agcgggtctt
    15841 tcaaatcgtc caaaatcgtg ccgcgtaaaa aattgctttc ggttttcaga cgttcgttgt
    15901 cggatagcgg tttttcttgc cacgccaaac cttttgtctt ggtctgtacg gtcattttgt
    15961 gttcctcccg attatattta atcaataaac atcacgctga tagcgttttt cttcgcgcag
    16021 catatccaaa tattcttctg cgccctcttc gtccaaatgt cctgccccga taatcacatc
    16081 cagcaaggcg gcttccacgt cttttgccat ttttgccgca tcgccgcaca catagatatg
    16141 cgcgccttcc tgcagccatt gccaaagtcc ttccgcctgt tcgcggattt tgtcctgcac
    16201 atagattttt tcttcctgat cgcgggacca ggcgaaatcg tacctgtgca ggaaaccgtc
    16261 tttggcaaac tgctgccatt cggtttgata gagaaaatca cgggcaaaat gcggattgcc
    16321 gaaaatcagc cagtttttgc cttccgcatt ttctgcggca cgttgttgga cgaaggcgcg
    16381 gaacggtgcg acgccggtgc ccgagccgat catcacaatc ggcttgcggc tgtcttcggg
    16441 cagcctgaag ccgtcgttgc gttccacaaa cacgcgcacc gtgccgtcct cttccagccg
    16501 gtcggcaagg aaacccgatg cgccgcccgc cctggcgcgc ccttcgtgtt cgaaacgcac
    16561 cgcgccgacg gtcaggtgca cttcgtcccc cacttccgcc tgcgacgagg aaatcgaata
    16621 caggcgcggc gcaagcgggc gcagtaggcc ggcgaattgt tccgccgtca gttttgccgg
    16681 gaagcggtgc agcacatcgg caatcggcgt gctttgcaca aagccttgca aaacggcgtt
    16741 gtcggcagca atacggtcga gttcgtcatc atcggcgaac ggggcatagc ctttgacaaa
    16801 ggcgggggtg ttttgcgtga gttcaaaatg ggataacagt gcggaggcaa ccggcagggt
    16861 ttttccgccc gcctgtattt ccgttgccgg atcgatgccg agcaggtcta ggatttccct
    16921 gaccagtgcc ggatcgttgt caaaccaaac gccgagcgcg tcgcccggga ggtagtgcaa
    16981 atccgaaccg ctcaaatcga tttcgatgtg gcgcacgtct ttatcggatt ggcgggcggt
    17041 gattttctga ttggccagca gggcggcggg aaaggggtct gccttgcagt acctgccatc
    17101 cggtgccgtc tgaaggccgg cggggggcgt tgtctgcggc gcgggcgttg cccggttttt
    17161 tgcggcttct tcttttaagc gcgcgacaat gcggcctgtc catccgtctg cggcggcggc
    17221 aaagtccaaa tccgcatcaa cgcgttcgag caggcgtttt gcgcccaatt cttcaaaacg
    17281 ccggtcgaaa tctttgcccg cccggcagaa attcggatag gaactgtcgc ccaaacccag
    17341 tacggcaaat tggagtttgt ccaatttcgg ggcttttttg ccgttcagca gtttgtgcag
    17401 cacgacggct tcttccggcg gttcgccttc gccctgggtg gacgtaacca gcagcaggcg
    17461 gcgttcgtcg gcgatgtttt tcgccttata gtctttcagt tcggcgcgcc tgacttggat
    17521 gccggcggct tccaggctgt ccgacgcttt gtcggcaacg gatttcgcat tgccggtttg
    17581 cgaggcggaa aggacggtta cggaaaaagg ttctgccgcc ggcaatgccg tctgaagcgc
    17641 gggcagccct gcggatgccc cgtttcctgc ttttgcccaa gcgtagccgg acagccacgc
    17701 ccattgtgcc gcgtccagcc ccgacaggag ctgcgtgatt tcgggcggca gaggcggtaa
    17761 tggcggattt gtgttctgca tatcgtgttc actcataaaa tcatacctgc cgcaacagtg
    17821 ccgtatgtcg cttcgtctat caggataaac gaaccggcgg cggtgttttc cgcataaggc
    17881 gttgccgtaa cgggtttttg aaggttgatg cggactttgg cgatgtcgtt catcttcaag
    17941 gattccgcgc cggcctcttg ttccagcgtg cggacatcta aaacgctttc aatttccccg
    18001 acttttgccg gcacggtttg cgtgccgtgc ttgagcaggt atttgcgcgc ggtgttgagc
    18061 ggacgttcgt caaaccagca aagcgtggct tccagatgtt tttgcggggc gagcggggaa
    18121 tttttatcga caaaaaggtc gccgcgcgaa acatcgatgt cgcggtccag ccggagggtt
    18181 gccgcctcgc cggcaaaagc ctgcgccact tcccctttcg gcgtgatgat ttcggacact
    18241 tcggcggtca gcccgttcgg ttcgatgcgg acggtttgcc cgacggcgac cgaaccgcgt
    18301 tcgatgcgcc cctgatagcc tcggaaatca tcggccttgt cggcatcttg gcggacgacc
    18361 agttggacgg ggaaataaaa atcggcagcg gaacgaccgg tttcgtccgc ccccggcagg
    18421 ttttccaaga tgaccagcag cggttcgccc cgataccacg gcatattgcc gccggggtaa
    18481 acgaggttgt cgcccaagag tgcggacacc ggtacgaaat gcacgtcttt caaaccgagc
    18541 tgttcggcaa gtcggcggta tgcctccaca atggcgttga atttgtcttc gctgtaatcc
    18601 agcaggtcca ttttgttgac cgccaccaca atatgcgggc agttgagttg gcggaggatg
    18661 gcggaatggc gtttggtctg cggcagaagc tgcaagggct gcgcgccgaa atccagttgg
    18721 gatgcgtcaa ccagcacgac tgccgccgaa gcggtgcttg cgcccgtaac catattgcgc
    18781 gtgtattgtt cgtgccccgg cgtgtcggcg atgatgaatt tccgtttcgc cgtggaaaaa
    18841 tagcggtatg ccacatcgat cgtaatgccc tgttcgcgtt cggcttccag tccgtcggtc
    18901 aggatggaga agtctatggt ttctttcaaa cctttgcttt tgccggattc caaggttttg
    18961 atttggtcgg acagcagggc tttgctgtcg tagagcagtc gtccgatcag ggtgcttttg
    19021 ccgtcatcga cgctgccggc ggtaatgaag cggagcgggg cctggtgttg tgccgtcata
    19081 ttttcttcct catatctgct taaagggttt ttgaaattta gaaatagcct tcttttttgc
    19141 gtttttccat tgccgcctcg cttgcctgat cgtctagccg ggtcgcgctg cgttcggaaa
    19201 tgtcggcaac cgccgtttcc ctgataatct ccgccggcgt ggacgcggtg ctttctaccg
    19261 ggcaggtgca gctgatgtcg ccgacggtgc ggaagcggac atcaaggatt tcggaggttt
    19321 cagacggcat tttcggggtg agcggcgtta cagggaccag cagccccctg cgtctgacca
    19381 cttcgcgcct gtggctgtaa taaatcggcg gcagctcgag gttttcgcgg gcgatgtatt
    19441 gccagatgtc gagttccgtc cagttggaaa tcgggaagac gcgcatattt tcgcctttgt
    19501 gcagcctggt gttgtacagc gaccacagct cggggcgttg cgccttcgga tcccattgtc
    19561 cgaactcgtc gcggaacgag aaaatccgtt ctttggcgcg ggctttttct tcgtcgcgcc
    19621 gcgcgccgcc catcagcgcg tcaaagccgt ttgcctcgat ggtttccaac aaggtaaccg
    19681 cctgtgccgc attgcgcgaa tcggtttctt tgcgtaagac caccgtgcct ttagcgatgg
    19741 agtcttccac gcgccccact atcaggcggg cattgagttt tgccgcctgc gcgtcgcgga
    19801 aggcaatcac ttcggggtag ttgtgccccg tgtcgatatg caccagcggg aagggcagtt
    19861 ttaccggcct gctgcccagc cggaaggctt tgcaggcgag ggcgagcagg accacggaat
    19921 ctttgccgcc ggaaaagagc agggcggggt tttcgcattc tgccgccact tcgcggataa
    19981 tgtggatgga ttcggattcc aaccagtcga gttggacgtt gttcggttcg gttttcgtca
    20041 tacgatattc cttatttctt ctgtttgatc cttatgaatt atttgtgcag cccgcattct
    20101 ttgctgtttt tatcttccca ccaccaccgc ccggcgcgga tgtcttcgcc ggccttgacg
    20161 gggcgggtgc aggggtcgca gcctatactg ggaaagcctt gccggtacaa atcgttgtaa
    20221 ggcacattgt tggcaaggat gtatgcccac acgtcgtgtt ccgaccagtc gaaaatcggg
    20281 ttgtatttat cgatgccgcg cccggcatca tattcggcaa acggcagttc cgtgcgtgtg
    20341 gcggactgtt cgcggcgttg cccggtaagc caagcatccg ccccggcaat ggcgcggtcg
    20401 agcggttcgg tttttcggat gcggcagcat tcgcggcgcg cttcaacgct gtcgtaaaag
    20461 gcaaacctgc ctttgctttc cacataatgc agggcatctt cccgtatcgg ttggaaacgc
    20521 ttgatttgca tatgcggata aacacgttca atcctatcca acaggtttaa agtttccgcg
    20581 tgcagcagcc ccgtatccaa agtaaaaata ccgatattga ggttttctcc ggcgataagg
    20641 tcggtaatta ccatatcttc cgcagcaagg ctgctggcaa accgtgcatc ccggtggctg
    20701 ccggcaatcc ggtgcaggcg ttgtttgagg gtttccgttt tttccgccaa agccgtttca
    20761 ctgccatttt caatcggcgg aattttccat aaagcaggtt tgaaaatttt cattttgtcc
    20821 gccttgcttt atgcggcttg ttgttcttgt ccggtgccca gtccgtccaa tgcaaaatac
    20881 gcgtgttcgg ccggattgct ttcttttttg gcgttttcgc cgaaccaagc cagtttttcg
    20941 tgcagcccca ccacttcgcc tatgacaatc aatgccggat tcggcgcggt ttcggcgagt
    21001 tcggcaaggt tggcgagcgt gccggttgcg gttttttgag ccggcagcgt gccttggctg
    21061 ataacggctg ccggcgtgtc gggcgagcgt ccgtgctgtt gcagccgttc ggcaatcagg
    21121 gcggctttga gcgcacccat ataaatcacc aaggtctggc ggctgcgggc gagggtctgc
    21181 cattcgatgt cgggcgcatc cgccttgcgg tggccggtta cgaaaaccgc actttgggca
    21241 taatcgcggt gcgtgagcgg gatgccggca taggcggtcg cgccgacggc ggcggtaatg
    21301 ccggggacga ccgaaaacgg gatctgatgg cgtgccaagg tttccaattc ttcgccgccg
    21361 cgtccgaaca cgaaagggtc tccgcctttt aaacgcacca cgcgcctgcc ttcgcgggcc
    21421 agcctgacca taagcgcatt ggtgtcctct tgcggggtgc ggccgccccg ggcgcgcttg
    21481 ccgacaaaaa tccgttccgc atcgcggcgg acgagggaca gtatgccgtc tgaaaccagc
    21541 gcgtcgtaaa gcaccacgtc tgcctgctgg atttcctgca gccctttgag cgtcagcagc
    21601 cccgcatcgc cgggacccgc accgaccaaa gacacaaaac cgccttgata attttgttcc
    21661 aactgctttg ccaattcccg ttcggcaagg gtgttttgcc ggtttttgac gagggcggcg
    21721 aaacgtccgt taaactgctt ttcccaaaag cggcggcgtt cggtaacgga tttcagtttg
    21781 cccttgacgg catcgcgcca ccttcctgaa atttccgcca tatcgcccaa agacggcggc
    21841 agcagggctt ccagcctttc acgcagcagt cgggcgagga cgggcgcgct gccggagctg
    21901 gaaacggcaa tctgaaccgg gttgcggtcg ataaccgacg ggaagatgaa gctgcaatgg
    21961 tcgcggtcgt ccaccacgtt gaccggcttt tggcagcttt cggcaagatg gaaaacgcgc
    22021 cggttgaggg cttggtcgct gcttgccgca atgatgagga aaaccgtgcg gatgtgttcg
    22081 gcacgaaatt cttcggcaag ccacaggatt ttgttttccg ccgccaacgc ggagagttcg
    22141 gcattcaggt gttttgcggc aaccctgacc tctgcgcccg ccttcagcag caggctgatt
    22201 ttgcgtgcgg cgaccgcgcc gccgcctacg accaatacgg ggcggccggc gaggttggcg
    22261 aaaataggga aataattcac tggctgactc ctttgctgtt tgcccgcacc ttgtttccga
    22321 tacggtgcgt cgcggcattt ttgtcggaat gcgggtcatt ttagacaaaa ggattttccc
    22381 ggttaaataa taaaaaggca tttgttagaa gctgaaagct atatgagggc ggctgcggat
    22441 gcggcggttt
//
LOCUS       DAWGKF010000012        21863 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.012, whole genome shotgun sequence.
ACCESSION   DAWGKF010000012 DAWGKF010000000
VERSION     DAWGKF010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21863)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21863)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21863
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.012"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..380)
                     /locus_tag="WHR07_000332"
     CDS             complement(<1..380)
                     /locus_tag="WHR07_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129599.1"
                     /translation="MSFGYLIATSQPCELLTKSRGETFSLIMDKMDLWIYFRFCEGNI
                     YTIRKNETESCLTERGGKWLKHIYEFNRGSFIFSYVLLKKRESEENFAEIVLKSIKNN
                     KILTVKVRSGLHFDLRNIYRIEMY"
     gene            complement(438..803)
                     /locus_tag="WHR07_000333"
     CDS             complement(438..803)
                     /locus_tag="WHR07_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129600.1"
                     /translation="MEKPLLTPPFFLFEDVSLDIFQGLSELEKKIEPQDLMDDVYRAF
                     DSVGNILNFRIVEKEQKGFWVSTKIKTVVFDSADMSSDDLFLKCLQSSYKAYFETEPA
                     GLDKRQLMKTLIQKCGFSC"
     gene            complement(785..1330)
                     /locus_tag="WHR07_000334"
     CDS             complement(785..1330)
                     /locus_tag="WHR07_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129601.1"
                     /translation="MKKQITAAVMMLSMIAPAMANSMDNQIFENQVFHTRADAPMQLA
                     ELSQKEMKETERAFLPLAILGGAAIGMWTQHGFSYATTGRPASVRDVAIAGGLGAIPG
                     GVGAAGKVVSFAKYGREIKIGNNMRIAPFGNRTGHPIGKFPHYHRRVTDNTGKTLPGQ
                     GIGRHRPWESKSTDRSWKNRF"
     gene            complement(1493..1765)
                     /locus_tag="WHR07_000335"
     CDS             complement(1493..1765)
                     /locus_tag="WHR07_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129602.1"
                     /translation="MFAVIFFSTLGCILAWIRDIPKIKSKKILARSLYIIGIINVIIG
                     YVLIKNILVSVSDGGGIKYVAIYLSNLFFWTVLMYVLVKRLSKKPS"
     gene            complement(2327..2800)
                     /locus_tag="WHR07_000336"
     CDS             complement(2327..2800)
                     /locus_tag="WHR07_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129603.1"
                     /translation="MKKQITSAVMMLSMIAPAMANGLDNQAFEKYVFHTQADAPMQLA
                     ELSQKEMKETEGAFLPIVAGALMGGAISAWANHGISKIKTGQFASTRSTLAATAGGMI
                     GGGYSSAMLRGAGITTSVFARSAWKGGNAIPNAVIRANGAALNQSSSAAMGKHRR"
     gene            complement(2843..3712)
                     /locus_tag="WHR07_000337"
     CDS             complement(2843..3712)
                     /locus_tag="WHR07_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="meta-pathway of phenol degradation family
                     protein"
                     /protein_id="HEZ2129604.1"
                     /translation="MKRIFLPALPAILPLSTYADLPLTIEDIMTDKGKWKLETSLTYL
                     NSENSRAELAAPVYIQTGATSFIPIPTEIQENGSNTDMLAGTLGLRYGLTGNTDIYGS
                     GSYLWHEERKLDGNGKTRNKRMSDISAGISHTFLKDDKNPALIGFLESTVYEKSRNKA
                     SSGKSWLIGATTYKAIDPVVLSLTAAYRINGSKTLSSNTKYKAGNYWMLNPNISFAAN
                     DRISLTGGIQWLGKQPDRLDGKKESARNTSTYAHFGAGFGFTKTTALNASARFNVSGQ
                     SSSELKFGVQHTF"
     gene            3876..4800
                     /locus_tag="WHR07_000338"
                     /pseudo
     CDS             3876..4800
                     /locus_tag="WHR07_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217494.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
     gene            complement(4878..5519)
                     /locus_tag="WHR07_000339"
     CDS             complement(4878..5519)
                     /locus_tag="WHR07_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEZ2129605.1"
                     /translation="MLKPETIHISGPAGILETIHIPSEQVPARGVAVINHPNPLQGGT
                     NTNKVIQTAAKALSKLGFHCYLPNLRGVGGSGGTHDYGRGETQDCLAVIDYARAQHPE
                     APEFALSGFSFGGYVATFAAQARIPDLLLLIGAAVCHYTNRPEPSAVPYVAKTLMIHG
                     AEDEVVEIEKALKWAEPQDLPVITIAGSTHFFHGKLIVLRDTILRFAPVCLNG"
     gene            complement(5574..6365)
                     /locus_tag="WHR07_000340"
     CDS             complement(5574..6365)
                     /locus_tag="WHR07_000340"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HEZ2129606.1"
                     /translation="MARHPYRRLRPAKSSFPEVGISEEGNIRSLHLGSDTIQSSMNLD
                     HPSELVLSYSRAMMGWLLFTDALPQHITQIGLGGGSFARWIDTYLPDTRQTAVDINPQ
                     VIAIARNLFELPFEGEKFEIIEADGAEYIKVFRHNTDIILVDGFDGEQIIDALVEEPF
                     FRDCRNALSSDGIFVTNWWSGDKRYQRFIERLLNVFEGRVLELPAESHGNVAVMAFQS
                     SPKEQNIDKLKKRADKLSNTYGLDFHRMLAGLKASNPNNGKHFHL"
     gene            6531..6606
                     /locus_tag="WHR07_000341"
     tRNA            6531..6606
                     /locus_tag="WHR07_000341"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6564..6566,aa:Thr,seq:tgt)
     gene            6641..6716
                     /locus_tag="WHR07_000342"
     tRNA            6641..6716
                     /locus_tag="WHR07_000342"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6674..6676,aa:Thr,seq:tgt)
     gene            6858..7649
                     /gene="panB"
                     /locus_tag="WHR07_000343"
     CDS             6858..7649
                     /gene="panB"
                     /locus_tag="WHR07_000343"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEZ2129607.1"
                     /translation="MITVNTLQKMKAAGEKIAMLTAYESSFAALMDDAGVEMLLVGDS
                     LGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAEL
                     MAAGAHMVKLEGGVWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQA
                     LLNDAKAHDEAGAAVVLMECVPAQLAKKVTETVSCPTIGIGAGVDCDGQVLVMHDMLG
                     IFPGKTAKFVKNFMHGQSSIQAAVRAYVAEVKAKTFPAAEHIFAD"
     gene            7639..7815
                     /locus_tag="WHR07_000344"
     CDS             7639..7815
                     /locus_tag="WHR07_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129608.1"
                     /translation="MQTEQGLLLMPSESRFRRHFVLPCAARIIGAFCRAGSPKDKDYR
                     YANHTYHSRTARLA"
     gene            7772..8608
                     /locus_tag="WHR07_000345"
     CDS             7772..8608
                     /locus_tag="WHR07_000345"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEZ2129609.1"
                     /translation="MQIIHTIRELRAWRKNAGKVAFVPTMGNLHEGHLALVREAKKRA
                     DNVVVSIFVNRLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRY
                     NVEPPNLQNELCGKFRPGHFRGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTED
                     LNFDVEIVPVDTGRAEDGLALSSRNQYLSAAERDEAPRLSRELKAVAESLAQGSLDYA
                     GLERQAADHLTAAGWVVDYVEIRRADTLEVARAGDKKLVVLAAARLGTTRLIDNLEIK
                     LP"
     gene            8773..10611
                     /locus_tag="WHR07_000346"
     CDS             8773..10611
                     /locus_tag="WHR07_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129610.1"
                     /translation="MLPARFTILSVLAAALLAGQAYAAGAADAKPPKEVGKVFRKQQR
                     YSEEEIKNERARLAAVGERVNQIFTLLGGETALQKGQAGTALATYMLMLERTKSPEVA
                     ERALEMAVSLNAFEQAEMIYQKWRQIEPIPGKAQKRAGWLRNVLRERGNQHLDGLEEV
                     LAQADEGQNRRVFLLLAQAAVQQDGLAQKASKAVRRAALKYEHLPEAAVADVVFSVQG
                     REKEKAIGALQRLAKLDTEILPPTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEM
                     EIMNLVSLHRLDDAYARLNVLLERNPNADLYIQAAILAANRKEGASVIDGYAEKAYGR
                     GTGEQRGRAAMTAAMIYADRRDYTKVRQWLKKVSAPEYLFDKGVLAAAAAVELDGGRA
                     ALRQIGRVRKLPEQQGRYFTADNLSKIQMFALSKLPDKREALRGLDKIIEKPPAGSNT
                     ELQAEALVQRSVVYDRLGKRKKMISDLERAFRLAPDNAQIMNNLGYSLLSDSKRLDEG
                     FALLQTAYQINPDDTAVNDSIGWAYYLKGDAESALPYLRYSFENDPEPEVAAHLGEVL
                     WALGERDQAVDVWTQAAHLTGDKKIWRETLKRHGIALPQPSRKPRK"
     gene            10751..11332
                     /locus_tag="WHR07_000347"
     CDS             10751..11332
                     /locus_tag="WHR07_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein LolB"
                     /protein_id="HEZ2129611.1"
                     /translation="MKHTVSASVILLLTACAQLPQNNENLWQPSEHISSFAAEGRLAV
                     KAEGKGSYANFDWTYQPLVETININTPLGSTLGQLCQDRDGALAVDGKGNVYQAESAE
                     ELSRQLVGFKLPIQYLHIWADGRRVAGAPYRILPDGILEQYGWTVGRTADSGGQVRTL
                     QLNNGNLNIRLVFTEIGIPSETETPERCAARTR"
     gene            11342..12187
                     /gene="ispE"
                     /locus_tag="WHR07_000348"
     CDS             11342..12187
                     /gene="ispE"
                     /locus_tag="WHR07_000348"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HEZ2129612.1"
                     /translation="MNIADGRQAFPAPAKLNLDLRITGRREDGYHNIESIFCLIDLQD
                     TVYLKPRDDGKIILHNPVDGMPQEADLSYRAASLLQKYARNPAGVEIWLDKKIPTGAG
                     LGGGSSDAATVLLVLNRWWQCSRTTQQLIDLGATLGADVPFFIFGKNAFASGIGEKLI
                     GMDIPKQWYVIVKPPVHVSTAKIFTHEGLTRNSASSIMPTFQNLQPFRNDMQAVVFKE
                     YPEVWKAYSELSRYGFALMTGSGACVFTACQDRDSAYNIYRQVSGLYEAYLAEGLSKH
                     PLLSV"
     gene            12195..12270
                     /locus_tag="WHR07_000349"
     tRNA            12195..12270
                     /locus_tag="WHR07_000349"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12228..12230,aa:Gln,seq:ttg)
     gene            12283..12358
                     /locus_tag="WHR07_000350"
     tRNA            12283..12358
                     /locus_tag="WHR07_000350"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12316..12318,aa:Gln,seq:ttg)
     gene            12367..12442
                     /locus_tag="WHR07_000351"
     tRNA            12367..12442
                     /locus_tag="WHR07_000351"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12400..12402,aa:Gln,seq:ttg)
     gene            12609..13592
                     /locus_tag="WHR07_000352"
     CDS             12609..13592
                     /locus_tag="WHR07_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEZ2129613.1"
                     /translation="MAAYDSLMVFTGNANPELAQRVVRHLDISLGNASVSKFSDGEVA
                     VELLENVRGRDVFILQPTCAPTNDNLMEILTMADALKRASAGRITTAIPYFGYARQDR
                     RPRSVRVPISAKLVANMLYSAGIDRVLTVDLHADQIQGFFDIPVDNIYATPILLNDIK
                     QQRIENLTVVSPDIGGVVRARAVAKSLNADLAIIDKRRPKANVAEVMNIIGDIQGRTC
                     LIVDDMIDTANTLCKAAVALKERGAERVLAYASHAVFSGEAVSRIASSEIDQVVVTDT
                     IPLSEAAKNCDRIRQVTIAGLLAETVRRISNEESVSYLFNEEVMTGSMLLP"
     gene            13659..14231
                     /locus_tag="WHR07_000353"
     CDS             13659..14231
                     /locus_tag="WHR07_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HEZ2129614.1"
                     /translation="MTYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVD
                     HKTVFYALEKESFHTALIKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVR
                     IRVPLHIVNAENSQAVKLQGGRVSLLNTSVEVVALPANIPAFLDLDCAEVVAGDILHL
                     SDIKLPEGVESVSLKRNENLAVATVTGKKR"
     gene            complement(14356..15525)
                     /locus_tag="WHR07_000354"
     CDS             complement(14356..15525)
                     /locus_tag="WHR07_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEZ2129615.1"
                     /translation="MTAHKILPVLLSIILGVSHATAASPAPNRPTVHAAPTFQTPETL
                     TAAHIVIDLQSKQILSAKNINTPVEPAALTQLMTAYLVFKNMKSGNIQSEENLKIPES
                     AWASEGSRMFVRPGDTVSTDKLLKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEA
                     RRLGMKNTVFKNPTGLSREGQVSTAKDLALLSEALMRDFPEYYPLFSIKSFKFKNIEQ
                     NNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAETRASDNSK
                     LLNWALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAKMAEQIL
                     ETIQPIPAPVKKGQILGKIKIRQNGYTIAEKEIVALENVKKRSRWQRLWARLTGQ"
     gene            15673..17199
                     /gene="ilvA"
                     /locus_tag="WHR07_000355"
     CDS             15673..17199
                     /gene="ilvA"
                     /locus_tag="WHR07_000355"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HEZ2129616.1"
                     /translation="MNTPLPYSDYLIRILTASVYDVAVETPLEPARSLSVRLKNNILL
                     KREDLQPVFSFKIRGAYNKMSKLPKDALACGVIAASAGNHAQGVALSAQRLGCRAVIV
                     MPETTPKIKVDAVKSHGGEVVLRGVSYNDAYDYAMELAEKEGLTYIAPFDDPDVIAGQ
                     GTVGMEIVSQHPDPIRAVFVPIGGGGLAAGVAAFIKQVRPEIKVIGVQTNDSCCMKQS
                     VEAGEIVHLKDVGLFSDGTAVKVVGNETFRLCKELLDEIITVDTDAVCGAVKDIFDDT
                     RSITEPAGALALAGLKAYIAREGAENQTLIAVTSGANMNFHRLRHVSERSELGEGNEG
                     IFAVTIPEERGSFLKFVNILGNRNITEFNYRYGDDEKAHIFVGLQAAGPQDLAVIGSR
                     LDEAGLPNVDLTNNEIAKIHIRYMVGGRTDKVENERLVSFEFPERPGALARFLNHMQG
                     GWNITLFHYRNHGADYGRILVGIDVPPHDAAAFDGFLESLGYSYHEETQNAAYKLFLA
                     "
     gene            complement(17256..18329)
                     /locus_tag="WHR07_000356"
     CDS             complement(17256..18329)
                     /locus_tag="WHR07_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HEZ2129617.1"
                     /translation="MSITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTL
                     LRIIAGLENADGGKILFDGQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTVL
                     PKSERPSKEQICTKVEELLKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLL
                     DEPFGALDAKVRKELRTWLRDIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQT
                     GSAEAIYRKPENAFVTEFLGETDAFEGRIEKGFWHYNGFAWKLDAQYKWQEQTATGYI
                     RPHEWQIAAEHETPMICAEIEKVHAVGALTHILVKHGKQDVHITLAGSDAARYPIAEG
                     KELKLIPKQVYVFSQNELIEYSI"
     gene            complement(18326..19186)
                     /gene="cysW"
                     /locus_tag="WHR07_000357"
     CDS             complement(18326..19186)
                     /gene="cysW"
                     /locus_tag="WHR07_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HEZ2129618.1"
                     /translation="MKPYSANPNLTEPRRLRVLLIAAALGFLLLMLVVPLVAVFYEAL
                     KGGWDLYLKSLNDPEAWSAIKLTLITALIVVPVNAVLGVAMAWLLTRFDFRGKQLLTT
                     LLDLPFSVSPVVAGLMFVLLFGAHTALGGWLEAQGIQIIFAIPGIILATLFVTFPFVA
                     REIIPLMQAQGDSEEQAALILGASGWQMFWRVTLPNIKWALLYGIILTNARAMGEFGA
                     VSVVSGHIRGETNTVPLLVEIFYNEYNFTGAFALSGVLALLALATLAVQNIITKLQDK
                     KLAAAERNAV"
     gene            complement(19556..20392)
                     /gene="cysT"
                     /locus_tag="WHR07_000358"
     CDS             complement(19556..20392)
                     /gene="cysT"
                     /locus_tag="WHR07_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysT"
                     /protein_id="HEZ2129619.1"
                     /translation="MLALKTPGVLPGFKLSLGLTVLCLSLLVVLPFAMMAAKAAEIGW
                     SGFWNTITEPNVLAAVWLSLRMSFYAMLTNVVFGTLVAWVLVRYEFPGKGLANALVDL
                     PFALPTAVTGIALATLYAPNGWIGRFFEPLGIKIAFTPVGIWIALVVVSLPFIVRAVQ
                     PVLEELSGEYEEAAATLGANRFTTFRRVLLPEITPALLTGAGMMFARATGEYGSVIFI
                     AGNIPMVSEILPLIITGKLEQFDVQGASAVALFMLLVSFVILFALNVMQWALGRRSGA
                     KG"
     gene            20531..20638
                     /locus_tag="WHR07_000359"
                     /pseudo
     CDS             20531..20638
                     /locus_tag="WHR07_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            20683..21015
                     /locus_tag="WHR07_000360"
     CDS             20683..21015
                     /locus_tag="WHR07_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general secretion pathway protein GspG"
                     /protein_id="HEZ2129620.1"
                     /translation="MQILSFQPDIAERMLEGTEGESVNENAQFVRTDNGYWIAWHEGV
                     AALLAPDTPPGIPCFWVEGAESLEELCVMVERGEFDEVEEFDGDDDEWLETAQGCGHH
                     GDACACGH"
     gene            21346..21855
                     /locus_tag="WHR07_000361"
     CDS             21346..21855
                     /locus_tag="WHR07_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003662333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxyl methyltransferase
                     family protein"
                     /protein_id="HEZ2129621.1"
                     /translation="MTMILSILSLFFIIRLLFLAVSIKHEKALIAKGAKQYGKTNSTL
                     LAAVHTLYYLACFVWVWLSDTAFNGISLIGTLTVMASFVILSLIIKQLGEIWTVKIYI
                     LPNHQINRSWLFKTFRHPNYFLNIIPELIGIALLCQAWYVLLIGLPIYLLVLFKRIRQ
                     EEQAMATLF"
BASE COUNT         5341 a         5077 c         5850 g         5595 t
ORIGIN      
        1 ctatacatct caatacgata aatatttctt aagtcaaaat gcaagcctga ccgtacctta
       61 actgtcaaaa ttttattatt ttttattgat tttaaaacaa tttctgcaaa attctcttcg
      121 ctttctctct tttttagaag cacataagaa aaaataaaac ttccccgatt aaattcataa
      181 atatgtttca accatttgcc tcctctttct gtaagacaag attcagtttc attcttcctt
      241 attgtataaa tatttccttc acaaaatctg aaataaatcc ataaatccat cttatccata
      301 attaaagaaa aagtttcacc tcgagatttt gtcaacaatt cgcaaggttg cgatgttgca
      361 atcaaatagc cgaaagacat tttttacctc atacatggtc gaaatcagtt tctgttagtt
      421 cagaatccat tttttcgtca acaactgaat ccgcattttt gaattaacgt tttcatcagc
      481 tgccgtttat ctaaaccggc aggttcagtt tcaaaataag ccttatatga agactgtaag
      541 catttcagaa aaagatcatc agaagacata tctgccgaat caaatacaac tgttttgatt
      601 ttggtactta cccaaaaccc tttttgctct ttttctacta tacggaaatt cagaatattt
      661 ccaaccgaat caaaagcacg gtaaacatca tccatcaaat cctgcggctc tattttcttt
      721 tccaattccg acaatccttg aaatatatcc aaagacacat cttcaaatag aaaaaaagga
      781 ggagttagaa gcggtttttc catgatctgt ccgtagattt tgattcccaa gggcgatgac
      841 gaccaattcc ctgtccaggc aaagtcttgc ccgtattatc cgtaactcga cgatgataat
      901 ggggaaattt tccaatagga tgacctgttc tattaccgaa aggggctatc cgcatattat
      961 tgccgatttt aatctcacgt ccatatttag caaaggaaac aacctttcct gcggcgccta
     1021 caccaccagg aattgcgcct aatccgccag caatagcaac atctctaaca gaagctggtc
     1081 tgcctgtcgt tgcataacta aaaccatgct gtgtccacat accaatggca gcaccaccca
     1141 agatagccaa tggaagaaac gccctctcag tctccttcat ctccttttga gaaagttccg
     1201 ccaactgcat cggcgcatct gcccgcgtat ggaatacttg gttttcaaat atctgattgt
     1261 ccatgctgtt tgccattgcg ggggcaatca tagacagcat cattacggct gcggtaattt
     1321 gttttttcat aataactcct ttggattaca aggttggaaa atcaaagccc tgcttagaac
     1381 gtatgttgca cacccaattt caataggtaa atcagattgc aaatccagca atttgaatat
     1441 tgtcattgtt ccgtgcaaaa gggattttta ttgatgagtt gtgtactggg tttcagcttg
     1501 gctttttaga taatcttttc acaagaacat acatcaatac tgtccaaaaa aaaagatttg
     1561 ataaatatat tgcaacatat tttattccac ctccatccga aacagaaacc aatatatttt
     1621 taattaatac atagccgatt attacattta ttattcctat aatatataag gatcttgcca
     1681 aaattttttt tgattttatt ttaggaatat ctcttatcca tgctaaaata cagcccaatg
     1741 tcgaaaagaa aataacagca aacactacct tacctcctct cacttccaac caaaccgata
     1801 gcaggtttgg ttggaagttg gtttatttat tatttaacgg cgaatgtcag tgttcttacc
     1861 cgtagaacct gcataaccag ttatgccacc agcaacagtc cccactgcta cacctcgcat
     1921 accattaatc agaattcttc ctattttttc gaatccacta tttcttccaa agatgcagca
     1981 aacgcaggtt gagcctagac ccaatctacg tttgccgccg catctgatcc ctattgtttc
     2041 ttatccttac atcttcctgc cttgtcaatc aaataaagac agaagactat acaaaaactg
     2101 accgacatac tgaaaatacc tatccccttc catgcaatct ccgcaccatt gacccaatag
     2161 atcagactga gaaacaacaa agccacagta taaatcaacg taaaaaatat tgcgtaaagc
     2221 acaataaagg gaacttttat ctcacggttg ttttttataa tatattcagc aacttgattt
     2281 ccgaatatac ctgataaaaa atatagtatt agatcatcca tttcgtttat cttctatgtt
     2341 ttcccattgc ggcgctagaa gactgattta atgctgcacc atttgcacga ataactgcat
     2401 taggaatagc atttccccct ttccaagcag aacgggcaaa aacactagta gtaatccctg
     2461 caccgcgcaa catcgcactg ctatatccgc ctcctatcat accaccagcg gttgcagcca
     2521 aggtacttct tgttgaagca aattgccctg ttttaatttt agaaatgccg tgattagccc
     2581 aagcactaat tgcccctccc atcaaagcac ctgccacaat aggaagaaac gccccctcag
     2641 tctccttcat ctccttttga gaaagctcag ccaactgcat cggcgcatct gcctgcgtgt
     2701 ggaatacgta tttttcaaat gcctgattgt ccaatccgtt tgccattgcg ggggcaatca
     2761 tagacagcat cattacggct gaggtgattt gttttttcat aataactcct ttggattaca
     2821 aggttggaaa atcaaaacct gcttaaaatg tatgctgtac gccaaatttc agttcggaac
     2881 tgctttgccc tgaaacgttg aaacgtgcgg atgcgtttaa agccgtggtt ttggtgaaac
     2941 cgaaacctgc gccgaaatgg gcataggtgg atgtgtttct tgcggattct tttttgccgt
     3001 ccagacggtc gggctgcttg cccagccatt ggatgccgcc cgtgaggctg attctgtcgt
     3061 tggcggcgaa ggatatattg ggattcagca tccagtaatt gcctgctttg tatttggtgt
     3121 tgcttgaaag ggttttgctg ccgttgatac ggtaggcagc agtcaatgag aggacgacgg
     3181 ggtcgatggc tttgtaggtg gtggcaccga tgagccacga ttttcccgac gaggctttgt
     3241 tgcgcgattt ttcgtaaacc gtgctttcaa gaaagccgat tagggcgggg tttttgtcgt
     3301 ctttgaggaa ggtgtggctg atgccggcgg atatgtcgga catccgtttg ttgcgggttt
     3361 tgccgttgcc gtcgagtttg cgttcttcgt gccacagata gctgccgctg ccgtaaatgt
     3421 cggtattgcc ggtcagtccg tagcgcaaac cgagcgtgcc ggcgagcata tcggtattgc
     3481 tgccgttttc ttgaatttcg gtcggaatgg ggataaacga ggttgcgccg gtttgaatgt
     3541 aaaccggtgc ggcaagttcg gcgcggctgt tttcgctgtt caggtaggta agggaagttt
     3601 ccagtttcca tttgcccttg tcggtcatta tgtcttcaat cgtcaagggc aggtcggcat
     3661 aagtggataa aggcaggatg gcgggcaagg cgggcaaaaa gatgcgcttc atatttctcc
     3721 tattgatatt aattcttatt tactgataat aatgaatatc cgataatttt gtctaaataa
     3781 atttttaaat caaaaaaaac gatatgtttg tttttgtcaa ttatgtttcg atatgccgtc
     3841 tgaaaagttt gtgaaaaacg gttacaatcc gccacatgaa aaaacgcaat aatcctcttc
     3901 ctctgttgaa cggtgtcaaa cccagttatt tggtgctgcc gcatgaaaag cagttttacg
     3961 ggctgccgct gctgcatttt ctgtgcatcc gctttccttt tgtgggcgcg gacgattggc
     4021 gtaggcggtt gaacagtggt tttgtggtcg gttcggatgg tgcggcgttg gatgaacata
     4081 ctttgttcga gccgggtaag gtgatgtttt attatcggga aaccagtcgc gagagcgagc
     4141 cgcgtattcc gtttgaagaa aagattttgc atattgatga acatttgatt gtggtggaca
     4201 agccgcattt tctgcccgtc atccccagcg ggcgtttttt gagggaaacg ctgctcacac
     4261 gtctgcgcct gcgtcctgaa ttgcagcatt tgaatgttga ggacattacg ccgctgcacc
     4321 gcttggacaa ggatacggca ggcgtgatgc tgctgtcgca taatcctgcc acgcgcggag
     4381 cctatcagac gatgtttcaa aacaaaacgg tatggaaaac gtatgaggcg cttgcgccga
     4441 caaggacgga tttgctgtat ccgctcgatg tggtttcgcg tttggtaagg ggtgaaaaat
     4501 tttttacgac gcaagaggcg gaaggcgtac cgaatgcgca cacgacggtc gaactgattg
     4561 aaaacagggg ggggattcag cctttaccgc cttacgccgc ataccggcaa gaaacaccag
     4621 ttgcgcgtac acatgatggg cttgggtatg ccgttgttga atgacgcgct ctatcccgtg
     4681 ccgtctgaag cgggaagcga ggattatcgg aaacctttga agctattggc aaaaaagatt
     4741 gcgtttgcag atcctttgtc gggtctggaa agggtgtttt acagtaggtt ttgcctataa
     4801 tgagagggaa tgcaaacccg tatcggcaga tgccgccgat acgggtttga tattatcgat
     4861 gccgtctgaa aggggtttta tccgttcagg catacgggcg cgaagcggag gatggtgtcg
     4921 cgcaggacga tgagtttgcc gtggaagaaa tgcgtggaac cggcgatggt aatgacgggc
     4981 aaatcttgcg gttcggccca tttcagggct ttttcgattt cgacgacttc gtcttccgcg
     5041 ccgtgtatca tcagcgtttt ggcaacatag ggaacggcgg acggctcggg gcggttggta
     5101 tagtggcaga ctgccgcgcc gatgagcagt aacaggtcgg gtatgcgcgc ttgtgcggca
     5161 aatgtggcga cataaccgcc gaaggagaag ccggataagg caaattcggg ggcttcgggg
     5221 tgttgggcgc gggcataatc gatgacggcg aggcagtctt gcgtttcgcc gcgtccgtaa
     5281 tcatgtgtgc ctccgctgcc gcctacgccg cgaaggttgg gcaggtagca gtggaagccg
     5341 agtttgctta aggctttggc ggcagtttgg ataactttgt tggtgtttgt tccgccctgg
     5401 agggggttgg gatgattgat gacggcaaca ccgcgtgccg gtacttgttc ggacgggata
     5461 tggatggttt ctaaaatgcc ggcaggaccg gatatgtgta tggtttcggg tttcagcata
     5521 atggtttcct cttgattttc cgcatgttcc gatgcagccg tgaagatagt tgcttaaagg
     5581 tggaaatgct tgccgttgtt ggggttggat gctttcaggc cggcgagcat acggtggaag
     5641 tccaatccgt atgtgttgct cagtttgtcg gcgcgtttct tgagtttgtc tatgttttgc
     5701 tctttggggc tgctttggaa tgccattacc gcgacattgc cgtgactttc ggcaggaagt
     5761 tccaagacgc gcccttcaaa gacgtttaac aggcgttcga tgaagcgttg gtagcgtttg
     5821 tcgccgctcc accagttggt tacgaatatg ccgtctgaag agagtgcgtt tcggcagtct
     5881 cggaaaaacg gttcttcaac cagcgcatcg atgatttgtt cgccgtcgaa cccgtccacc
     5941 aagatgatat cggtgttgtg gcggaagact ttgatatatt ccgcaccgtc tgcttcaata
     6001 atttcaaatt tctcgccctc gaaaggcaac tcaaacaggt tgcgggcaat ggcgataacc
     6061 tgcgggttga tgtccacggc ggtttggcgc gtgtcgggca ggtaggtgtc tatccagcgt
     6121 gcaaacgaac cgccgcccaa gccgatttgg gtgatatgct gcggaagagc gtcggtaaac
     6181 agcagccatc ccatcatggc acggctgtaa gagagtacca gctcggacgg gtggtcgagg
     6241 ttcattgagc tttggatggt gtcgctgccc aagtgaagcg aacggatatt gccttcttcg
     6301 gaaatgccga cttcgggaaa gctggatttt gcaggacgca ggcggcggta gggatgtctt
     6361 gccatcggtg tgaacggtcg gtttgaaagg cagatatttt atcagaatgg cgatggttgt
     6421 cctgcttcaa attaatttct tttcaaataa attacttatt cggatttgcc ggggctttcg
     6481 gataaattcc ttgccaaggt gcggcattgc ctgcataatt cgctttcttt gccggtatag
     6541 ctcagttggt agagcacctg acttgtaatc agggggtccc gagttcgact cttggtgccg
     6601 gcaccatttc tgctgatggt gttgcaaaac atttcagtaa gccggtatag ctcagttggt
     6661 agagcacctg acttgtaatc agggggtccc gagttcgact cttggtgccg gcaccagatt
     6721 tgacagtccg attgtgtaaa acagtcgggc tgttttgcat ttgcggcacg gtcggtggca
     6781 gggctgcggg catttcacta taatagcccg tttcaaactg aaaaggccgt ctgaaaaggg
     6841 cggggtaaca atatctgatg attactgtga acacactgca aaaaatgaag gcggcgggcg
     6901 aaaaaatcgc tatgctgacc gcttacgaat ccagttttgc cgcactgatg gacgatgccg
     6961 gcgtggaaat gctgctggtc ggcgactctt tgggtatggc ggttcaaggg cggaaatcga
     7021 cgctgcccgt cagcctgcgc gatatgtgct atcacaccga atgtgtagca cgcggtgcaa
     7081 aaaatgcgat gattgtcagc gatttgccgt ttggtgcata tcagcagagt aaggagcagg
     7141 cgtttgccgc cgccgccgaa ctgatggctg ccggcgcgca tatggtcaaa ctcgaaggcg
     7201 gcgtgtggat ggcggaaacg accgaatttc tgcaaatgcg cggtattccg gtttgcgcgc
     7261 acatcggtct gacgccgcaa tccgtgtttg ccttcggcgg atataaagtt caggggcgcg
     7321 gcggcaaggc gcaggcgttg cttaacgatg ccaaggcgca cgatgaagct ggagctgccg
     7381 tcgtgctgat ggagtgtgtt cctgcgcaac tggcaaaaaa ggtaactgaa actgtttcct
     7441 gtccgaccat cggcattggc gcgggtgtcg attgcgacgg gcaggttttg gtgatgcacg
     7501 atatgctcgg tatttttccg ggcaagacgg cgaaattcgt caaaaacttt atgcacgggc
     7561 aaagcagcat tcaggcggcg gttcgggcgt atgttgccga agtcaaagcc aaaaccttcc
     7621 ctgctgcgga acatattttt gcagactgaa caaggtttgc tgctgatgcc gtctgaaagc
     7681 cgtttcagac ggcattttgt tttgccgtgc gcggcgcgta taatcggcgc gttttgtcgg
     7741 gcaggaagcc cgaaggataa ggattaccgt tatgcaaatc atacatacca ttcgagaact
     7801 gcgcgcctgg cgtaaaaatg cgggaaaggt ggcatttgtg ccgaccatgg gcaatctgca
     7861 tgaaggacat cttgctctcg ttcgcgaagc caaaaaacgc gccgacaacg ttgttgtcag
     7921 catattcgtc aaccgcctgc aattcggtca gggcgaggat ttcgacaaat atccgcgtac
     7981 tttgcaacag gatgcggaca agctggaagc cgagggtgtt gccgttgttt tcgcgcccga
     8041 tgagaaagaa ctctatccga acgtggaaca gcgttacaac gtcgaaccgc ccaacctgca
     8101 aaatgagttg tgcggcaagt ttcgtccggg acatttccgc ggggtggcaa cggtagtgtc
     8161 caagctgttc aatattgtcg cgccggatgt tgcctgtttc ggcaaaaaag actatcagca
     8221 gcttgccgtg attaaaggtt tgaccgagga tttgaatttt gatgttgaaa tagtgcctgt
     8281 cgatacgggg cgcgcggaag acggtttggc actctccagc cgcaaccagt atttgagtgc
     8341 ggcggaacgc gacgaagcac cgcgcctgtc ccgcgaatta aaggctgttg ccgaatcctt
     8401 ggcgcagggc agtttggatt atgcaggttt ggagcggcag gctgccgacc atttgaccgc
     8461 tgcgggctgg gtggtcgatt atgtcgaaat ccgccgcgcc gatacgctcg aagtggcgcg
     8521 ggcgggagat aagaaactgg tggtcttggc cgccgcccgt ctggggacga cgcgcctgat
     8581 tgacaatttg gaaataaaac tcccttaaac cgcaagcgtc gggaatgccg tctgaagcgg
     8641 atttgcgttt cagacggcat ttattttttt gaacggggtt tcgcaaatct acaaacgatt
     8701 ctgcttgtga taaagttacg cctgattata tgccgtctga aggttcggac ggctgtcgga
     8761 taaaggaaga ttatgttacc cgcccgtttc accattttat ctgtgctcgc ggcagccctg
     8821 cttgccgggc aggcgtatgc cgccggcgcg gcggatgcga agccgccgaa ggaagtcgga
     8881 aaggttttca gaaagcagca gcgttacagc gaggaagaaa tcaaaaacga acgcgcacgg
     8941 cttgcggcag tgggcgagcg ggttaatcag atatttacgt tgctgggagg ggaaaccgcc
     9001 ttgcaaaagg ggcaggcggg aacggctctg gcaacctata tgctgatgtt ggaacgcaca
     9061 aaatcccccg aagtcgccga acgcgccttg gaaatggccg tgtcgctgaa cgcgtttgaa
     9121 caggcggaaa tgatttatca gaaatggcgg cagattgagc ctataccggg taaggcgcaa
     9181 aaacgggcgg ggtggctgcg gaacgtgctg agggaaagag gaaatcagca tctagacgga
     9241 ctggaagaag tgctggctca ggcggacgaa ggacagaacc gcagggtgtt tttattgttg
     9301 gcacaagccg ccgtgcaaca ggacgggttg gcgcaaaaag catcgaaagc ggttcgccgt
     9361 gcggcgttga aatatgaaca tctgcccgaa gcggcggttg ccgatgtggt gttcagcgta
     9421 cagggacgcg aaaaggaaaa ggcaatcgga gctttgcagc gtttggcgaa gctcgatacg
     9481 gaaatattgc cccccacttt aatgacgttg cgtctgactg cacgcaaata tcccgaaata
     9541 ctcgacggct ttttcgagca gacagacacc caaaaccttt cggccgtctg gcaggaaatg
     9601 gaaattatga atctggtttc cctgcacagg ctggatgatg cctatgcgcg tttgaacgtg
     9661 ctgttggaac gcaatccgaa tgcagacctg tatattcagg cagcgatatt ggcggcaaac
     9721 cgaaaagaag gtgcttccgt tatcgacggc tacgccgaaa aggcatacgg cagggggacg
     9781 ggggaacagc ggggcagggc ggcaatgacg gcggcgatga tatatgccga ccgaagggat
     9841 tacaccaaag tcaggcagtg gttgaaaaaa gtgtccgctc cggaatacct gttcgacaaa
     9901 ggtgtgctgg cggctgcggc ggctgtcgag ttggacggcg gcagggcggc tttgcggcag
     9961 atcggcaggg tgcggaaact tcccgaacag caggggcggt attttacggc agacaatttg
    10021 tccaaaatac agatgttcgc cctgtcgaag ctgcccgaca aacgggaggc tttgaggggg
    10081 ttggacaaga ttatcgaaaa accgcctgcc ggcagtaata cagagttaca ggcagaggca
    10141 ttggtacagc ggtcagttgt ttacgatcgg cttggcaagc ggaaaaaaat gatttcagat
    10201 cttgaaaggg cgttcaggct tgcacccgat aacgctcaga ttatgaataa tctgggctac
    10261 agcctgcttt ccgattccaa acgtttggac gaaggcttcg ccctgcttca gacggcatac
    10321 caaatcaacc cggacgatac cgctgtcaac gacagcatag gctgggcgta ttacctgaaa
    10381 ggcgacgcgg aaagcgcgct gccgtatctg cggtattcgt ttgaaaacga ccccgagccc
    10441 gaagttgccg cccatttggg cgaagtgttg tgggcattgg gcgaacgcga tcaggcggtt
    10501 gacgtatgga cgcaggcggc acaccttacg ggagacaaga aaatatggcg ggaaacgctc
    10561 aaacgtcacg gcatcgcatt gccccaacct tcccgcaaac cccggaaata atgcaggtcc
    10621 atcctttcag acggcataag gtttgccggg aagctgcggc attcgggcaa accgcacgca
    10681 gttcgcacgc gttttgcacg gcacgccgaa cccgccggcc ggcaggatgg cacccgttaa
    10741 ggaaattctg atgaaacaca ccgtatccgc atcggtcatc ctgcttttga ccgcttgtgc
    10801 gcaattacct caaaataacg aaaacctgtg gcagccgtcc gaacacatca gcagttttgc
    10861 agcagaaggg cggttggcag tgaaagcgga agggaaaggt tcgtatgcaa atttcgattg
    10921 gacataccaa ccgctcgtgg aaaccatcaa tatcaatacc cctttgggca gtacgctcgg
    10981 gcagttgtgt caagacaggg acggcgcatt ggcagtggac ggcaaaggaa atgtctatca
    11041 ggcggaaagt gcggaagaat tgagcaggca gctggtcggt ttcaaactgc caatccaata
    11101 tctgcatatc tgggcagatg gcaggcgtgt ggcgggcgcg ccttaccgca tcctgccgga
    11161 cggcatattg gaacaatacg gttggactgt cggcagaacc gccgacagtg gggggcaagt
    11221 ccgaacgttg caactgaata acggaaattt gaacatcagg ctggttttca ccgaaatcgg
    11281 tattccgtct gaaaccgaaa ccccggaacg ctgtgcggcg cgcacgagat aaggcggaca
    11341 gatgaatatt gcggacggac ggcaggcgtt tcccgcacct gcaaaactga atctcgattt
    11401 gaggattacc ggcaggcggg aagacggtta tcacaatatc gaaagcatat tctgcttgat
    11461 agatttgcag gataccgtat atttgaaacc gagggacgac ggcaaaatca tcctgcacaa
    11521 tccggttgat ggcatgccgc aggaagccga tttgagctac cgtgccgcat cgttgctgca
    11581 aaaatatgcg cgcaaccccg ccggcgtgga aatatggctg gacaaaaaaa tcccgacagg
    11641 ggcgggtttg ggcggcggaa gctcggatgc ggcaaccgtt ttgctggtgt tgaaccgttg
    11701 gtggcagtgt tcccgaacga cgcagcagct gattgacttg ggcgcaactt tgggtgcgga
    11761 cgtaccattt tttattttcg gaaaaaatgc ttttgcaagc gggataggtg aaaaactgat
    11821 aggaatggat attccgaaac agtggtatgt catcgtcaaa ccgcccgtcc acgtttccac
    11881 tgcaaaaatt ttcacacacg aaggcttgac acgaaattcc gcctcaagca taatgccgac
    11941 tttccaaaac ctgcaaccgt ttagaaatga tatgcaggca gttgtattta aagaataccc
    12001 tgaagtttgg aaagcctatt ccgaattgtc ccgatatgga tttgccttaa tgacaggttc
    12061 tggtgcgtgt gtattcacgg cgtgtcaaga tagggatagc gcatacaata tataccgaca
    12121 agtttcaggt ttgtacgagg catatttggc agagggtctt tcaaaacatc ctttgttgtc
    12181 cgtataaaca ttgttgggga gtcgtcaagc ggttaagaca ctggattttg attccagcat
    12241 gcgaaggttc gaatccttcc tccccagcca agccaaacga gttggggagt cgtcaagcgg
    12301 ttaagacact ggattttgat tccagcatgc gaaggttcga atccttcctc cccagccagc
    12361 cctttttggg gagtcgtcaa gcggttaaga cactggattt tgattccagc atgcgaaggt
    12421 tcgaatcctt cctccccagc caaataaaag cgtgtaagcc tgcttacacg cttttatttc
    12481 atagaaataa aaatattgaa atgcctttgt ttgtgtcgga tgttgcaggt ataatgtcgg
    12541 gcttggtaca agcagaggga agcattgtgt tttctgagcg gaagttaaac ataaaatcag
    12601 gtgagaatat ggctgcgtac gacagtttga tggtatttac aggcaatgcc aatcccgaat
    12661 tggcacaacg tgttgtcagg catttggaca tttctttggg caatgcttcc gtatccaagt
    12721 tttcagacgg cgaagttgcc gtcgaactgt tggaaaacgt acgcgggcgc gatgttttca
    12781 tccttcagcc gacctgtgcg ccgaccaatg acaacctgat ggaaatcctg acgatggcgg
    12841 atgcactgaa gcgtgcttcg gcaggtcgta ttaccacagc cattccgtat ttcggctatg
    12901 cgcgccaaga ccgccgtccg cgttccgtcc gcgttccgat ttctgccaaa ctggtggcaa
    12961 atatgctgta ttcggcaggg atcgaccgtg ttttgactgt cgatttgcat gccgaccaga
    13021 ttcaaggttt cttcgatatt ccggtggaca atatttatgc caccccgatt ctgttgaacg
    13081 acatcaaaca acagcggatt gaaaatctga ccgtcgtcag cccggacatc ggcggtgtcg
    13141 tccgcgcccg cgccgtggca aaatccctga atgccgactt ggcaatcatc gacaaacgcc
    13201 gcccgaaagc caatgtggcg gaagtcatga acatcatcgg cgatattcaa ggtagaacct
    13261 gtctgattgt ggacgatatg attgacactg caaatacgct gtgcaaagcc gccgtcgccc
    13321 tgaaagagcg gggggctgaa cgtgttctag cctatgccag ccacgccgta ttctccggag
    13381 aggcggtcag ccgtatcgcc tcatccgaaa tcgaccaggt ggtcgtaacc gataccattc
    13441 ctttgtctga agcggctaaa aactgcgacc gtatccgtca ggtaacgatt gccggtctgt
    13501 tggccgaaac cgtccgccgc attagcaatg aagaatccgt ctcatatctt ttcaatgaag
    13561 aagtgatgac aggcagcatg ttgctgccat aagcccgaag ccgtcttaag ctggtcgcgg
    13621 ccgatgacgg cgattttacc taacttggag tatttaacat gacttatgaa attcaagcct
    13681 ctgttcgtga agcacaaggc actggtgcga gccgccgcct gcgtcgcgaa ggccaaatcc
    13741 ccggcattct gtacggtgaa ggtcaagagc ctgttgcaat cgctgtggat cacaaaaccg
    13801 tattctacgc attggaaaaa gaatctttcc atactgcgtt gattaagttg tctctgaacg
    13861 gtgaaaccaa agacgttatc gtccgcgatt tccaaatgca cccgttccgc cgcgaagttc
    13921 aacacatcga cttccaagct gtgaaagcag accaacccgt acgcatccgc gttcccctgc
    13981 acatcgttaa cgctgaaaat tcccaagcgg tcaaactgca aggcggccgc gtatctctgt
    14041 taaacacttc tgttgaagta gttgctttgc ctgccaacat ccctgctttc ttggatttgg
    14101 attgtgctga agtggttgcc ggcgacattc tgcacttgtc agacatcaaa ctgcctgaag
    14161 gtgtagaaag cgtttccctg aaacgtaacg aaaatctggc tgttgctacc gttaccggta
    14221 agaaacgcta attgatttca gcagcagggc ggcgcgtatg caatacgtac cgccctgttg
    14281 ttttatgccg tctgaaccgt gtttcagacg gcatttcttt atttgttgga aaaacgggat
    14341 atttgaaata gcagattact gccctgtcag acgcgcccaa agcctttgcc accggcttct
    14401 tttttttaca ttttccagtg cgacgatttc tttttcggca atggtgtatc cgttttgtct
    14461 gattttgatt tttcctaaaa tttgcccttt ttttaccggg gcgggaatcg gctgtatggt
    14521 ttctagaatt tgttctgcca ttttcgcttc cttatgtggc agagtgatgt aggcttcttt
    14581 gaggaagcct gcgcggacgg tttttttgct gcctccggaa atttggattt gggcaacggt
    14641 tttgcctttc ggatatattt tgggcgtatc gaaggcctgc aatgcccagt tcagcagctt
    14701 gctgttgtct gatgcgcgtg tttccgccga ttccgaaccc aatgtgatga caaggatgtg
    14761 cctgccgttg ccggagtatg acacggcaag gttgtagccg ccgctttctg tgtgtccggc
    14821 tttcagaccg tttacattgt tgtccctata taaaaggata ttgcggttgt tttgttctat
    14881 atttttgaat ttgaaagatt tgatggaaaa cagcgggtaa tattccggaa agtcgcgcat
    14941 caatgcttca gacagcaggg cgaggtcttt ggcggtggaa acctgtcctt ctctactcaa
    15001 gcctgtcggg tttttgaata cagtgttctt catgcccaag cgtcgggctt ctttgttcat
    15061 ttgttgcaca aaattttcaa tcgagccgtt gcccagccgg ccggcaaggg ttagggcggc
    15121 atcgtttgcg gatagtgcaa tcatgccttt taagagtttg tcggtgctga ccgtatcgcc
    15181 gggacgtaca aacattctgc ttccttctga agcccatgcg gattcgggta tttttaagtt
    15241 ttcttcagat tggatattgc ccgatttcat gtttttgaaa accagatatg cggtcatcag
    15301 ttgggttagt gccgccggtt caacaggggt attgatgttt ttggcggata aaatctgttt
    15361 gctttgaagg tcgataacga tgtgtgccgc tgtgagggtt tcgggtgttt ggaacgtggg
    15421 ggcggcgtgt accgtcggtc tgttgggcgc gggcgatgca gccgttgcgt gagaaacgcc
    15481 taagatgatg gaaagcagga cgggcaggat tttatgtgct gtcatgaaat attctaattg
    15541 tgtgcgtgtt tcagtctgcc gattatacgc ttagggtgtc tgatcgggcg gatttttctt
    15601 gatttcgcgc cgtcttgggc gtatggtttt gggttttgcg attttaataa accgattatc
    15661 ccatattgaa ttatgaacac gccccttcct tattccgatt acctcatccg catcctgacg
    15721 gcatctgtct atgatgtggc ggtcgaaacg cctttggaac cggcacgcag cctttctgta
    15781 cgtttgaaaa acaacatcct tttgaaacgc gaagatttgc agccggtttt ttcgttcaaa
    15841 atacgcggcg cgtacaacaa aatgtccaag ttgccgaaag atgcgctcgc ttgcggcgtg
    15901 attgcggcaa gcgcgggcaa tcatgctcaa ggcgtggcat tgtccgcaca gcgtttgggc
    15961 tgccgtgccg ttatcgttat gccggaaact acgccgaaaa tcaaagtgga tgcggttaaa
    16021 agccatggcg gcgaggtggt tttgcggggc gtttcataca acgatgccta cgattatgcg
    16081 atggagttgg cggaaaaaga agggttaacc tatatcgcgc cgtttgatga tcctgatgtg
    16141 attgcgggac aggggacggt ggggatggaa attgtcagcc agcatcccga tccaatccgc
    16201 gccgtattcg taccgatagg cggtggcggt ttggcggcgg gcgtggcggc atttatcaag
    16261 caggtccgtc ccgaaatcaa agttatcggc gttcagacca acgattcctg ctgtatgaag
    16321 cagtcggtcg aagcgggtga aatcgtccat ttgaaagatg tcgggctgtt ttcagacggc
    16381 actgcggtca aagtcgtcgg aaacgaaacc ttccgcctct gcaaagaact tttggatgaa
    16441 atcattacag tcgataccga tgcggtttgc ggcgcggtca aggatatttt cgatgacacg
    16501 cgcagcatta ccgagccggc gggcgcgttg gcgttggcgg gtctgaaagc ctatatcgcc
    16561 cgagaaggcg cggaaaacca aaccctgatt gccgttacca gcggtgcgaa tatgaatttt
    16621 caccgtttgc gccacgtttc ggaacggagc gaattgggcg agggcaacga aggtattttt
    16681 gccgttacca tccctgaaga acgcggcagc ttccttaagt ttgtcaatat attgggaaat
    16741 aggaatatta ccgagttcaa ctaccgctac ggagacgatg aaaaagcgca tatctttgtc
    16801 ggacttcaag cggcaggccc gcaggatttg gcggttatcg gcagccggtt ggatgaggcg
    16861 ggattgccca atgtcgattt gaccaacaat gagattgcca aaatccatat ccgctatatg
    16921 gtcggagggc ggacggacaa agtagaaaac gagcgtttgg tcagttttga gtttccggag
    16981 cgtccggggg cattggcacg ctttttgaac catatgcagg gagggtggaa tattacgctt
    17041 ttccattacc gcaaccacgg tgcggattac gggcggattt tggtcggtat cgatgtgccg
    17101 ccgcacgatg ccgccgcatt tgacggtttc ttggaaagtc tgggatacag ctatcacgag
    17161 gaaacgcaaa atgccgcgta caagctgttt cttgcctgac gcttgaaagc acaatgccgt
    17221 ctgaaagcct ttcagacggc attgcgcttt catggttaaa tcgaatattc aatcagttcg
    17281 ttttgagaga agacataaac ctgtttcgga atcagcttca attctttgcc ttcggcgatt
    17341 gggtaacgcg cggcatcgct gccagccagc gtgatatgca cgtcttgttt gccgtgtttc
    17401 accaaaatat gcgtcaatgc cccgacggcg tggacttttt cgatttcggc acaaatcatc
    17461 ggtgtttcgt gttcggcggc gatctgccat tcgtgcgggc ggatatagcc ggtggcggtt
    17521 tgttcctgcc atttgtattg tgcgtccaat ttccacgcga agccgttata atgccagaag
    17581 cctttttcga tgcgtccttc aaaagcgtcg gtttcgccga ggaactcggt aacgaaggca
    17641 ttttcgggtt tgcggtaaat agcttcggcg ctgccggttt gttcgatttt gccgtggttc
    17701 atcacgacga tttcgtcgga aacttcgagg gcttcttctt ggtcgtgcgt aaccagaatg
    17761 ctggttacac ccaggttgtg atggatatcg cgcagccagg tgcgtaattc tttgcgtact
    17821 ttggcgtcca acgcgccgaa gggttcgtcc aaaagcagga gtttcggttc gaccgcaagc
    17881 gcacgggcga gggcgatgcg ctggcgttgc ccgccggaga gttggtgcgg ataggatttt
    17941 gccaaatgcg agagttgtac gagtttcagc aattcttcga ctttagtgca gatttgttct
    18001 ttggacgggc gttcggactt gggcaatacg gtcaaaccga aggcaacgtt gtcaaacacg
    18061 ttcatatggc ggaaaagggc gtagtgttgg aacacgaagc cgactttgcg ctcgcgcacg
    18121 tgcttggcgg ttacgtcttg cccatcaaac agaatcttgc cgccgtcggc gttttccagt
    18181 ccggcgataa tgcgtaaaag cgtggttttg ccgcagccgg acgggccgag cagggaaacg
    18241 agtttgccgg tggggacgtt gaggttgatg tttttcagcg cgtgaaaatt gccgaagtgt
    18301 ttgtttaagt tttggatggt gatactcata ctgcgttcct ttcggcggcg gcgagttttt
    18361 tgtcttgtaa tttggtgatg atgttctgca ccgccagcgt cgccagtgcc aaaagtgcca
    18421 atacgccgga gagggcgaat gcgccggtga agttgtattc gttgtagaag atttcgacca
    18481 aaagcgggac ggtgttggtt tcgccgcgta tgtgtcccga taccacgctg accgcgccga
    18541 actcgcccat cgcgcgggcg ttggtgagga tgatgccgta gagtaacgcc catttgatgt
    18601 tgggcagggt aacgcgccaa aacatctgcc agccgcttgc gccgagtatc aatgccgcct
    18661 gttcttcgct gtcgccctga gcctgcatca gcgggatgat ttcgcgtgcg acaaagggga
    18721 aagtaacgaa cagcgtcgcc agaataatgc cggggatggc gaagataatc tgtatgcctt
    18781 gcgcttcgag ccagccaccc aatgccgtgt gcgcgccgaa caataagacg aacattaaac
    18841 cggccaccac gggcgatacg gaaaacggca aatcgagcag ggtagtcagc aactgcttgc
    18901 cgcgaaaatc aaaacgggtc agcagccacg ccatcgccac acccaataca gcattgacgg
    18961 gaacgacaat cagcgcggta atcagcgtca atttgatggc agaccacgct tcgggatcgt
    19021 ttaaggattt taggtacaaa tcccaaccgc cttttaaggc ttcgtaaaac acggcgacga
    19081 gcggcacgac cagcatcagc agcagaaagc ccagcgcggc ggcaatcagc aacacgcgca
    19141 gccggcgcgg ttcggtcagg ttgggattgg cggaataggg tttcatggcg gtggtgttct
    19201 ctggttggtt taaaatgttt ggaggtcgtc tgaaaaggga ttgaggggtt tcagacgacc
    19261 tttttgttca ttaagtagta ggtcggatac ttgtatccga caaggttgct gaatcgcaaa
    19321 tgtttgtcgg atacaagtat ccgacctacg aattctgtgt tttgtggggc ggattcgttt
    19381 tcagacgacc ttttattgat taagggaata aaaaaacgtc tagctgccgt cattcccgcg
    19441 caggcgggaa tccaccacag ggcaacagga aaacagaaaa taaataaggc agccgaaatt
    19501 caccaatgga ttcccgcctg cgcgggaatg acggtaacag gtatttcaga cgacctcaac
    19561 ccttcgcgcc cgaacgcctg cccaacgccc actgcatcac gttcagcgca aacagaatca
    19621 caaacgaaac cagcagcata aacaacgcca ccgccgacgc gccctgtacg tcgaactgtt
    19681 ccagcttgcc cgtaataatc agcggcagga tttcagaaac catcggaata ttgcccgcga
    19741 taaaaatcac cgagccgtat tcccccgttg cccgcgcgaa catcattccc gcgccagtca
    19801 agagtgccgg cgtgatttcc ggcagcagca cgcggcggaa cgtcgtaaag cggtttgcgc
    19861 ccaaagtcgc cgccgcttcc tcatattcgc ccgataattc ctccaacacc ggctgcacgg
    19921 cgcggacgat aaagggcagg ctgacgacga ccagcgcaat ccaaatgccg acgggtgtaa
    19981 acgcgatttt gatgcccaaa ggctcgaaaa aacggcctat ccaaccgttg ggcgcataca
    20041 gggtcgccaa cgcgataccc gtaaccgccg tcggcagcgc aaacggcaaa tcaaccagcg
    20101 cgttcgccaa gcccttgccc ggaaattcat agcgcaccaa tacccacgcc accagcgtgc
    20161 cgaacacgac attggtcagc atcgcataaa acgacatccg caaactcagc cagacggccg
    20221 ccaagacatt gggttcggta atcgtgttcc aaaatccgct ccagccgatt tccgccgcct
    20281 tcgccgccat catcgcaaac ggcaagacca caagcagcga caggcacaat acggtcagac
    20341 caaggctgag tttgaagccg ggcagtacgc cgggcgtttt gagcgctaac ataaaacaat
    20401 gctgaaaata aggaaaagga aggactactt taacgatgcc gtccgaaaaa cggaaagaat
    20461 ggaaagtttg gtgtaaagac gaatttgtta taaagcggtt ggcagtttct caagcgggcg
    20521 cgatgtttta aaatatagtg gattaaattt aaatcaggat aaggcgacga agccgcagac
    20581 agtacaaata gtacggcaag gcgaggcaac gccgtactgg tttaaattta atccactata
    20641 acgccttgtt ttgacggaaa accatcatat aaaggaacac ttatgcagat tttatctttt
    20701 cagccggaca ttgcggaacg tatgctggaa ggtacggaag gcgagtcggt caacgaaaac
    20761 gcacaattcg tccgtacgga caacggctat tggattgcgt ggcatgaagg cgtagcggca
    20821 ctgcttgcgc ccgatacgcc gccgggcatt ccctgttttt gggtggaagg cgcggaaagc
    20881 cttgaagagt tgtgcgtcat ggtggaacgc ggcgagtttg acgaagtgga agagtttgac
    20941 ggcgatgacg acgaatggct cgaaacggca cagggttgcg ggcaccacgg cgacgcttgc
    21001 gcctgcggac attaaaggca ttgcaggctt gccgcaaggg ggcaaggctt tgccgttttt
    21061 taaataatcg gtggattgca tctgtttgca atgggctgaa cgcttccctt tgtattttat
    21121 tgaataaaaa aacttatctt ggtattataa ttaaggcagc atcaattatt ttgggatggc
    21181 aataaacgca aagcattgat ttgcgccgat tgcagactta ttatagcagg ttgcggcgcg
    21241 gacttaatgg gaattgttta tagagcatga tggtctgaaa catcattaat taaaaatacc
    21301 attaatccga tttatattta tttcaatttc aatggaaaaa catcaatgac aatgatttta
    21361 agcattttaa gcctgttttt tatcatcaga ctgttatttt tagccgtctc tattaaacat
    21421 gaaaaagcct tgattgccaa aggggcgaaa caatacggaa aaaccaattc cacgctgctt
    21481 gcggcagttc atacgcttta ttatttggcg tgttttgttt gggtatggct ttctgacact
    21541 gcttttaatg gcatatcctt gattggtacg ctgacggtga tggcttcgtt tgtgatattg
    21601 tcattgatta ttaagcagtt gggggagatt tggacggtta aaatctatat tttaccaaat
    21661 catcaaatta atcgttcgtg gttgtttaaa acattccgcc accccaatta ttttttaaac
    21721 atcatacccg aactgattgg catcgcctta ttatgtcaag cgtggtatgt tttattgatt
    21781 ggcctgccca tttatttgct ggtcttattt aagcgtatcc gacaagaaga acaggcgatg
    21841 gcaacacttt tttaacccgt ttc
//
LOCUS       DAWGKF010000013        21822 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.013, whole genome shotgun sequence.
ACCESSION   DAWGKF010000013 DAWGKF010000000
VERSION     DAWGKF010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21822)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21822)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21822
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.013"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(87..860)
                     /locus_tag="WHR07_000362"
     CDS             complement(87..860)
                     /locus_tag="WHR07_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEZ2129622.1"
                     /translation="MSANILAIANQKGGVGKTTTTVNLAASLASRGKRVLVVDLDPQG
                     NATTGSGIDKAGLQSGVYQVLLGDADVKSATVRSKEGGYAVLGANRALAGAEIELVQE
                     IAREVRLKNALKAVAEDYDFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGIS
                     DLIATVRKIRQAVNPDLDITGIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETAIPRNI
                     RLAEAPSHGMPVMAYDAQAKGTKAYLALADELMARVSGK"
     gene            complement(959..1582)
                     /gene="rsmG"
                     /locus_tag="WHR07_000363"
     CDS             complement(959..1582)
                     /gene="rsmG"
                     /locus_tag="WHR07_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HEZ2129623.1"
                     /translation="MERKERLRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTA
                     LRDEEKMIVHHLLDSLTLLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQITLLDANT
                     KKTAFLQQAVIELGLDNVRVVSGRVEAVSDVRADVVTSRAFAELADFVSWTVHLLKDG
                     GYWAAMKGVYPQEEIGRLPQDVCVEKVQRLDVPGLDAERHIVILSKR"
     gene            complement(1678..2163)
                     /locus_tag="WHR07_000364"
     CDS             complement(1678..2163)
                     /locus_tag="WHR07_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129624.1"
                     /translation="MFVNEKYPYAALFAGLVFLTLPFALAVHDAFALAFGRTGLLVSV
                     SDGGFGWRGGWDGVVWFVFGVFAFLNVVVSAGLTKLAYKKMMRRHSRYTLFLSGVAAC
                     AAAAVAWIFELLLGSGALGGLRGEAVLEYAFAVWLVAMLTLPKRLTRAPVQPVVFHRK
                     K"
     gene            2268..2343
                     /locus_tag="WHR07_000365"
     tRNA            2268..2343
                     /locus_tag="WHR07_000365"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2301..2303,aa:Thr,seq:cgt)
     gene            2376..3542
                     /locus_tag="WHR07_000366"
     CDS             2376..3542
                     /locus_tag="WHR07_000366"
                     /inference="COORDINATES: protein motif:HMM:NF016513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEZ2129625.1"
                     /translation="MLFHISASDGTTDMNTSQRNRLVSRWLNSYERYRYRRLIHAVRL
                     GGAVLFATALARLLHLQHGEWIGMTVFVVLGMLQFQGAIYSKAVERMLGTVIGLGAGL
                     GVLWLNQHYFHGNLLFYLTVGTASALAGWAAVGKNGYVPMLAGLTMCMLIGDNGSEWF
                     DSGLMRAMNVLIGAAIAIAAAKLLPLKSTLMWRFMLADNLTDCSKMIAEISNGRRMTR
                     ERLEENMAKMRQINARMVKSRSHLAATSGESRISPAMMEAMQHAHRKIVNTTELLLTT
                     AAKLQSPKLNGSEIRLLDRHFTLLQTDLQQTVALINGRHARRIRIDTAINPELEALAE
                     HLHYQWQGFLWLSTNMRQEISALVILLQRTRRKWLDAHERQHLRQSLLETREHG"
     gene            3723..4280
                     /gene="frr"
                     /locus_tag="WHR07_000367"
     CDS             3723..4280
                     /gene="frr"
                     /locus_tag="WHR07_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEZ2129626.1"
                     /translation="MINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEY
                     WGSMVPVSQVANVTLLDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPM
                     PMLTEERRKDLIKVVRGEAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAV
                     QKLTDKYITEADKLLTAKEEDLMAI"
     gene            4336..5082
                     /locus_tag="WHR07_000368"
     CDS             4336..5082
                     /locus_tag="WHR07_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HEZ2129627.1"
                     /translation="MKSSTQAVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGL
                     DALENMVKHCAKLGVQYLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNM
                     RLKILGSRERFNRQILQGIEEAEALTANNTGLTLSIAADYGGRWDILQAANKLIAEGV
                     SEITEDTLAKHLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGK
                     ALDDAVASFQKRERRFGRTSEQLPIEQQRN"
     gene            5085..5882
                     /locus_tag="WHR07_000369"
     CDS             5085..5882
                     /locus_tag="WHR07_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEZ2129628.1"
                     /translation="MLKQRVITAMWLLPLMLGMLFYAPQWLWAAFCGLIALIALWEYA
                     RMSGLCKIKTNHYLAATLVFGVVAYAGGWMLPNLVWYVVLAFWLAIMPLWLRFKWRLN
                     GGWQVYAVGWLLVMPFWFALVSLRPHPDDALPLLAVMGLVWVADVCAYFSGKAFGKHK
                     IAPAISPGKSWEGAIGGAVCVAVYMTSVRSAGWLAFDTGWFDTVLIGLVLTVVSVCGD
                     LLESWLKRAAGIKDSSKLLPGHGGVFDRTDSLIAVISVYAAMMSVLN"
     gene            5887..7122
                     /locus_tag="WHR07_000370"
     CDS             5887..7122
                     /locus_tag="WHR07_000370"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEZ2129629.1"
                     /translation="MPSENASDGIRYKVIPIMTPQVLTILGSTGSIGESTLDVVSRHP
                     EKFRVFALAGHKQVEKLAVQCRTFRPEYAVVADAEHAARLEALLKGDGTATQVLHGAQ
                     ALVDVASADEVSGVMCAIVGAVGLPSALAAAQKGKTIYLANKETLVVSGALFMETARA
                     NGAAVLPVDSEHNAVFQVLPRDYAGRLNEHGIASIILTASGGPFLTADLNTFDSITPA
                     QAVKHPNWSMGRKISVDSASMMNKGLELIEAHWLFNCPPEKLEVVIHPQSVIHSMVRY
                     RDGSVLAQLGNPDMRTPIAYCLGLPERIDSGVGDLDFDALSALTFQKPDFDRFPCLKL
                     AYEAMNAGGAAPCVLNAANEAAVAAFLDGQIKFTDIAKTVAHCLSQDFSDGIGDIGGL
                     LAQDARTRAQARAFIGTLR"
     gene            7157..8497
                     /gene="rseP"
                     /locus_tag="WHR07_000371"
     CDS             7157..8497
                     /gene="rseP"
                     /locus_tag="WHR07_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEZ2129630.1"
                     /translation="MHTLLAFIFAILILVSLHEFGHYIVARLCGVKVVRFSVGFGKPF
                     FTRKRGDTEWCLAPIPLGGYVKMVDTREGEVSEADLPYAFDKQHPAKRIAIVAAGPLT
                     NLALAVLLYGLSFSFGVTELRPYVGTVEPDTIAARAGFQSGDKIQSVNGTPVADWGSA
                     QTEIVLNLEAGKVAVGVQTASGAQTVRTIDAAGTPEADKIAKNQGYIGLMPFKITTVA
                     GGVEKGSPAEKAGLKPGDRLTAADGKPIASWQEWANLTRQSPGKKITLTYERAGQTHT
                     ADIRPDTVEQPDHTLIGRVGLRPQPDRAWDAQIRRSYRPSVVRAFGMGWEKTVSHSWT
                     TLKFFGKLISGNASVSHISGPLTIADIAGQSAELGLQSYLEFLALVSISLGVLNLLPV
                     PVLDGGHLVFYTAEWIRGKPLGERVQNIGLRFGLALMMLMMAVAFFNDVTRLLG"
     gene            8554..10947
                     /gene="bamA"
                     /locus_tag="WHR07_000372"
     CDS             8554..10947
                     /gene="bamA"
                     /locus_tag="WHR07_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEZ2129631.1"
                     /translation="MKLKQIASALMVLGISPLALADFTIQDIRVEGLQRTEPSTVFNY
                     LPVKVGDTYNDTHGSAIIKSLYATGFFDDVRVETADGQLLLTVIERPTIGSLNITGAK
                     MLQNDAIKKNLESFGLAQSQYFNQATLNQAVAGLKEEYLGRGKLNIQITPKVTKLARN
                     RVDIDITIDEGKSAKITDIEFEGNQVYSDRKLMRQMSLTEGGIWTWLTRSNQFNEQKF
                     AQDMEKVTDFYQNNGYFDFRILDTDIQTNEDKTKQTIKITVHEGGRFRWGKVSIEGDT
                     NEVPKAELEKLLTMKPGKWYERQQMTAVLGEIQNRMGSAGYAYSEISVQPLPNAETKT
                     VDFVLHIEPGRKIYVNEIHITGNNKTRDEVVRRELRQMESAPYDTSKLQRSKERVELL
                     GYFDNVQFDAVPLAGTPDKVDLNMSLTERSTGSLDLSAGWVQDTGLVMSAGVSQDNLF
                     GTGKSAALRASRSKTTLNGSLSFTDPYFTADGVSLGYDVYGKAFDPRKASTSIKQYKT
                     TTAGAGIRMSVPVTEYDRVNFGLVAEHLTVNTYNKAPKHYADFIKKYGKTDGTDGSFK
                     GWLYKGTVGWGRNKTDSALWPTRGYLTGVNAEIALPGSKLQYYSATHNQTWFFPLSKT
                     FTLMLGGEIGYANGYGKTKEIPFFENFYGGGLGSVRGYESGTLGPKVYDEYGEKISYG
                     GNKKANVSAELLFPMPGAKDVRTVRLSLFADAGSVWDGKTYDDNSSSATGGRVQNIYG
                     AGNTHKSTFTNELRYSAGGAVTWLSPLGPMKFSYAYPLKKKPEDEIQRFQFQLGTTF"
     gene            11013..11513
                     /locus_tag="WHR07_000373"
     CDS             11013..11513
                     /locus_tag="WHR07_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HEZ2129632.1"
                     /translation="MTRLTRAFAAALIGLCCTAGAHADTFQKIGFINTERIYLESKQA
                     RKIQKTLDSEFSARQDELQKLQREGLDLERQLAEGKLRNAKKAQAEEKWRGLVAAFRK
                     KQAQFEEDYNLRRNEEFASLQQNANRVIVKIAKQEGYDVILQNVIYVNTQYDVTDSVI
                     KEMNAR"
     gene            11546..12589
                     /gene="lpxD"
                     /locus_tag="WHR07_000374"
     CDS             11546..12589
                     /gene="lpxD"
                     /locus_tag="WHR07_000374"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HEZ2129633.1"
                     /translation="MIPATYTLSQITARLGGEWRGEDISVTAVRPLADAQAEHISFLA
                     NPKYKAEVHDSSAGAVIVSAKAADGFEGRNLIVADDPYLYFAKVARLFSPVVKAHGGI
                     HPTAVVEPSATVPASCEIGANAYIGANTVLGEGCRILANAVVQHDCKLGDEVVMHPNA
                     VVYYGCTLGRRVEIHSGAVIGADGFGLAFAGDSWFKIPQTGAVTLGDDVEIGSNTNID
                     RGAMSDTTVGNGTKIDNQVQIGHNCKIGSHTVIAAKTGISGSVTIGSYCIIGGGVGTV
                     GHIEIADKTTIGGGTSVTHSITESGKHLAGIFPMSTHKEWARNAVHIHRLSEMNKRLK
                     TLEQQLSDGKDTQ"
     gene            12625..13074
                     /gene="fabZ"
                     /locus_tag="WHR07_000375"
     CDS             12625..13074
                     /gene="fabZ"
                     /locus_tag="WHR07_000375"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HEZ2129634.1"
                     /translation="MDVQLPIEAKDIQKLIPHRYPFLQLDRITAFEPMKTLTAIKNVS
                     INEPQFQGHFPDLPVMPGVLIIEAMAQACGTLAILSEGGRKENEFFFFAGIDEARFKR
                     QVIPGDQLVFEVELLTSRRGIGKFNAVAKVDGQVAVEAIIMCAKRVV"
     gene            13281..13961
                     /locus_tag="WHR07_000376"
     CDS             13281..13961
                     /locus_tag="WHR07_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HEZ2129635.1"
                     /translation="MERYKNAVGEDKAAELYLLNLSLSRELFHVVSIFEIVLRNKIDI
                     CLQQAFKDRNWLYNSIQPQTNPALKYQGCFLRNGTKESAELIKVALSKIQNNSGGKFD
                     HNQLVAGLGFGFWRYLFAGGKDAQFDATGKVLMKVFPKKPKSTPSVQYNQKWIFRELS
                     NINKFRNRLAHHEPICFKGAIKDTNYARNIHQSIFELLNYMDVDTASVFSHFSDQVIA
                     VCDEIDKL"
     gene            14004..14780
                     /gene="lpxA"
                     /locus_tag="WHR07_000377"
     CDS             14004..14780
                     /gene="lpxA"
                     /locus_tag="WHR07_000377"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HEZ2129636.1"
                     /translation="MTLIHPTAVIDPKAELDSSVKVGAYTVIGPNVQIGANTEIGPHA
                     VINGHTSIGENNRIFQFASLGEIPQDKKYRDEPTKLIIGNGNTIREFTTFNLGTVTGI
                     GETRIGDDNWIMAYCHLAHDCVVGNHTIFANNASLAGHVTIGDYVVLGGYTLVFQFCR
                     IGDYAMTAFAAGVHKDVPPYFMASGYRAEPAGLNSEGMRRNGFTAEQISAVKDVYKTL
                     YHRGIPFEEAKADILRHAETQAELAVFRDFFAQSARGIIR"
     gene            15138..16529
                     /locus_tag="WHR07_000378"
     CDS             15138..16529
                     /locus_tag="WHR07_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEZ2129637.1"
                     /translation="MQVFLDNPKAFFETVSGWVWGPVMLMLLVGTGILLTVLLKGLQF
                     TMLGYALKQAFVPPKKHKSGEGHEGDISHFAALMTALSATIGTGNIAGVATAVVTGGP
                     GAVFWMWMTAIFGMATKYGEGVLAVKYRVNNSKGEMSGGPMYYIEKGLGKNWKWMAVA
                     FALFGTFASFGIGSSVQSNSVAQAVQTSFGIEPAYTGITLTVLTAVVVLGGIKGIAKA
                     ASFIVPAMAVFYVLGGLSIIAINSDALMPAVKLIFSDAFSAQAVAGGAIGTVIRYGVA
                     RGVFSNEAGMGSAPIAAAAAKTDHPVRQALVSMTGTFLDTIVVCSITGIVLVMGLLGA
                     GGEFVKPEVSGAALTTVTFQKMLPGIGGWIVTIGLIFFAYSTILGWCYYGEKCAVYVF
                     GEKFAGLYRVGYVSSVMLGTVLSLDLVWLASDTFNGLMALPNLIALLLMAKVIVHETR
                     DFKQKITNGELPH"
     gene            16608..17864
                     /locus_tag="WHR07_000379"
     CDS             16608..17864
                     /locus_tag="WHR07_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HEZ2129638.1"
                     /translation="MKVLVLGAGVAGVSSAWYLAEAGHEVTVIDRAEGVAMETSFANA
                     GQLSYGYTTPWAAPGIPTKALKWLFKSHPPLLFRPDGSLYQIEWLWQMLQNCTAAHYQ
                     TNKERMVRISEYSREMFRRFEAQTGMNFEERKKGTLQIFRQTKEVEAAEQDIAVLERY
                     GVPYRRLKPEECAEFEPALARVTAKIAGGLHLPADATGDCHLFTENLYKLCQEKGVQF
                     HFNQTISRIDHNGLRIKAVETETGRFEADAVVCALGCFSRTVLAQLDLNLPIYPVKGY
                     SLTLPVTNSDGAPVSTVLDESYKVAITRFDNRIRVGGMAELSGYEIKLPEKRRETLAL
                     VVNDLFPEGGDLSQALFWSGLRPMTPDSTPLIGRTRFENLFLNTGHGTLGWTMSLGSA
                     KLTADIVSGKDTEIRSDDLSLSRYQA"
     gene            18045..18854
                     /gene="zupT"
                     /locus_tag="WHR07_000380"
     CDS             18045..18854
                     /gene="zupT"
                     /locus_tag="WHR07_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HEZ2129639.1"
                     /translation="MPDFSMSNLAVAFSITLAAGLFTVLGSGLVMFSKTPNPRVLSFG
                     LAFAGGAMVYVSLTEIFSKSSEAFAEIYDKDHAFAAATMAFLAGMGGIALIDRLVPNP
                     HETLDAQDPSFQESKRRHIARVGMMAAFAITAHNFPEGLATFFATLENPAVGMPLALA
                     IAIHNIPEGISIAAPVYFATRSRKKTVWACLLSGLAEPLGAALGYLVLQPFLSPAVFG
                     SVFGVIAGVMVFLALDELLPAAKRYSDGHETVYGLTMGMAVIAVSLVLFHF"
     gene            18951..21788
                     /locus_tag="WHR07_000381"
     CDS             18951..21788
                     /locus_tag="WHR07_000381"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEZ2129640.1"
                     /translation="MLDKYNPAEIESKHYQNWEEQGYFQPDMDLTKPSFSIQLPPPNV
                     TGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVVERQLAAQNVSRH
                     DLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAETVTEVFVRLY
                     EQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPLADNPAEAVIVATTRP
                     ETLLGDVAVAVNPEDERYTHLIGKELILPLTGRTIPVIADEYVEKDFGTGCVKITPAH
                     DFNDYEVGKRHDTRLINVFDLEAKVLANAEVFNFKGEAQPGFALPEKYAGLDRFAARK
                     QMVADLQEQGLLVEIKAHTLMTPKGDRTGSVIEPMLTSQWFVAMSATPNGGEPDSEFK
                     GLSLADKAKKAVDSGTVRFIPENWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYDEAG
                     NVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAFLPSNV
                     LVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVIDPVDL
                     IDGIDLDKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASLGR
                     SVNFDFKRAEGYRNFCNKIWNATNFVLMNTENQDCGYGATAAEPRGYSFPDMWIVGRL
                     NQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKVQLQTGCASRQRATRHTL
                     LRVLEAALRLLHPIIPFITEELWQTVAPMCDAKTADSIMLARFPEADGGDIVQTAFEQ
                     MTVLQDLIGAVRNLRGEMGIQPNVKAPLFVESADDLADYLKYLPMMTRLIEAQQVAAL
                     PESEDAPVAVCNGARLMLKVEIDKAAETARLSKEAEKLQKALDKLNAKLSKPGYTEKA
                     PAHLVEKDKADLAELEDKMAKVQTQLSKLKD"
BASE COUNT         5357 a         6454 c         5537 g         4474 t
ORIGIN      
        1 cgatataagt atttttattt taatccgcca tattaacgca ctcggccaaa cagcataaag
       61 gcacgggcag cccgatttgg attgacctat ttccccgaca ccctcgccat cagctcgtcc
      121 gccaaggcaa gatacgcctt ggtacccttt gcctgcgcgt cgtaagccat aaccggcata
      181 ccgtggctcg gggcttccgc aagacggata ttgcgcggga tggcggtttc aaaaagcaaa
      241 tccccgaaat ggctgcgcaa ctgttcgctg acttcggcaa ccagcctgct gcggctgtcg
      301 tacatcgtgc gcacgatgcc cgtgatgtcc aaatcgggat tgaccgcctg acggattttg
      361 cgcacggttg caatcaaatc ggaaatccct tccagcgcgt aatattcgca caacatcggc
      421 acaatcacgc cgcccgccgc caccaagccg ttaagcgtca acagcgtcag cgaaggcgga
      481 cagtcgatca ggataaagtc gtaatcttcc gccactgcct tgagtgcgtt tttcaaacgc
      541 acttcccggg cgatttcctg caccagctcg atttccgcac cggccagcgc gcggttcgca
      601 cccaacacag cgtatccgcc ctctttgctg cgtaccgtcg ccgatttcac gtccgcatcg
      661 cccaataaga cctgataaac gccggactgc aaacccgcct tgtcgatacc gctgcccgtc
      721 gtcgcattgc cctgcggatc caaatcaacc accagcacgc gtttgccgcg cgatgccagc
      781 gaagccgcca aatttaccgt cgtcgtcgtt ttgcccacac cgcccttctg attggcgatg
      841 gcaaggatgt tcgcactcat gtcccgcccg tgtcccgtct gatgttgaaa aaagaaaaac
      901 agtgcggaat tttaccttta tccgcacaaa aaaggtattc atgccgtctg aagtgcgctc
      961 aacgcttgct caggatgacg atatggcgtt ccgcatccaa gcccggcacg tcgagccttt
     1021 ggactttttc aacgcacaca tcctgcggca ggcggccgat ttcttcctgc ggatacacgc
     1081 ccttcatcgc cgcccagtag ccgccgtctt tcaacagatg caccgtccac gacacaaaat
     1141 ccgccagttc tgcaaacgca cggctggtaa ccacatcggc acgcacgtcc gaaaccgcct
     1201 ccacgcgtcc ggataccacg cgcacattgt ccaaccccaa ctcgataacc gcctgctgta
     1261 aaaaagccgt tttcttcgta ttcgcatcca aaagggttat ctgcacatcc ggacggcaca
     1321 ccgccgccgg aatgccgggc tgaccgccgc ccgaaccgac atccagcatc gtttgcacac
     1381 cctcgatatg gggcagcagc gtcaggctgt ccaaaagatg atggacaatc attttttcct
     1441 cgtcgcgcag ggcggtcaga ttgtaggttt tgttccactt tttcaacaga tccacatagg
     1501 ccaaaagcct gtcctgtgcc gtttccgaaa tatccagccc catcgcggca atgcctgcac
     1561 gcaggcgttc tttgcgttcc atatccctat cctgtccatg ttcaggcgta atgttaacgg
     1621 aaaaacatgc cgtctgaaac cgcgtgtcgg ggttcagacg gcatttcccg ttccaaccta
     1681 ttttttcctg tgaaacacca ccggctgcac cggcgcgcgc gtcaggcgtt tgggcagcgt
     1741 cagcatcgcc accagccaca cggcaaacgc atattccaac accgcctccc cacgcagccc
     1801 gcccaaagcc ccactgccaa gcagcagctc gaaaatccaa gccaccgctg ccgccgcgca
     1861 agccgccacg cccgacagaa acagtgtgta acgcgaatgc cgccgcatca tctttttgta
     1921 cgccagtttc gtcagacccg ccgacacaac cacattcaaa aacgcaaaca ctccgaacac
     1981 aaaccacacc acgccgtccc agcctcctcg ccagccgaat ccgccgtccg acaccgacac
     2041 cagcaacccc gtccgtccga acgcaagcgc aaaggcatca tgcaccgcca acgcaaacgg
     2101 cagcgtcaaa aacaccagtc ccgcaaacag agccgcataa ggatatttct cgttcacaaa
     2161 catcgccgtc cccctcttcc gaagcagacc gcattatacc gcgcactgcc ttgccgcccg
     2221 ccagaaaagt tgcacaaaca accgttcata tatatcataa cgaaaacgcc ggtgtagctc
     2281 agtcggtaga gcagcgcatt cgtaacgcga aggtcggggg ttcgattccc ttctccggca
     2341 ccaataccaa gcacagaccc tccctcggga agcctgtgct ttttcacatt tccgcttcag
     2401 acggcacaac cgatatgaac acctcgcaac gcaaccgcct cgtcagccgc tggctcaact
     2461 cctacgaacg ctaccgctac cgccgcctca tccacgccgt ccggctcggc ggggccgtcc
     2521 tgttcgccac cgcactcgcc cggctgctcc acctccaaca cggcgaatgg ataggcatga
     2581 ccgtcttcgt cgtcctcggc atgctccagt ttcaaggggc gatttactcc aaggcggtgg
     2641 aacgtatgct cggcacggtc atcgggctgg gcgcgggttt gggcgtttta tggctgaacc
     2701 agcattattt ccacggcaac ctcctcttct acctcaccgt cggcacggca agcgcactgg
     2761 ccggctgggc ggcggtcggc aaaaacggct acgtccctat gctggcgggg ctgacgatgt
     2821 gcatgctcat cggcgacaac ggcagcgaat ggttcgacag cggcctgatg cgcgccatga
     2881 acgtcctcat cggcgcggcc atcgccattg ccgccgccaa actgctgccg ctgaaatcca
     2941 cactgatgtg gcgtttcatg cttgccgaca acctgaccga ctgcagcaaa atgattgccg
     3001 aaatcagcaa cggcaggcgc atgacccgcg aacgcctcga agagaacatg gcgaaaatgc
     3061 gccaaatcaa cgcacgcatg gtcaaaagcc gcagccacct cgccgccaca tcgggcgaaa
     3121 gccgcatcag ccccgccatg atggaagcca tgcagcacgc ccaccgtaaa attgtcaaca
     3181 ccaccgagct gctcctgacc actgccgcca agctgcaatc tcccaaactc aacggcagcg
     3241 aaatccggct gctcgaccgc cacttcacac tgctccaaac cgacctgcaa caaaccgtcg
     3301 cccttatcaa cggcagacac gcccgccgca tccgcatcga caccgccatc aaccccgaac
     3361 tggaagccct cgccgaacac ctccactacc aatggcaggg cttcctctgg ctcagcacca
     3421 atatgcgtca ggaaatttcc gccctcgtca tcctgctgca acgcacccgc cgcaaatggc
     3481 tggatgccca cgaacgccaa cacctgcgcc aaagcctgct tgaaacacgg gaacacggct
     3541 gacggtcgga cacgatgccg tctgaaacgc ctgccgcttc agacggcatc tccaatcctc
     3601 ctgccttgtc gtcatgcccg aataacggta ctattcgcag ttaacagttt tcatgccgtc
     3661 tgaaaggttt gaagcgcgtt tcagacggct gcccgcccac cttatcccac cgaaagaaca
     3721 atatgatcaa cgatattcaa aaaacagccg aaggcaaaat gcagcgttcg gtcgaagtac
     3781 tgaaagaaaa tctggcgaaa gtgcgtaccg gccgcgcgca taccggcctg ctcgaccaag
     3841 tggaagtcga atactggggc agcatggtcc ccgtcagcca agttgccaac gtaacgcttc
     3901 tggacgcgcg caccatcggc gtgaaaccgt ttgagggcaa tatggcggcc aaagtcgaga
     3961 aagccatccg cgattcaaac ttggggctga acccggcagc tgtcggcgac ctgatccgcg
     4021 tgccgatgcc catgctgacc gaggaacgcc gcaaagacct gattaaagtc gtacgcggcg
     4081 aagcggaaga aggccgcgtc tctatccgca acgtgcgccg cgatgccaac gaccacatca
     4141 aaaaactcct caaagacaaa gaaatttccg aagacgaggc acgtcgcggc gaagaagcgg
     4201 ttcaaaaact gaccgacaaa tacattaccg aagccgacaa actcctgact gccaaagaag
     4261 aagatttgat ggcaatttaa cctgcacggt tcggcgttca gacggcattt gaatgccgaa
     4321 ccgcgaaagg cagacatgaa aagcagcacg caggccgttt tggaacacac cgccattccc
     4381 aagcatatcg ccgtgattat ggacggcaac ggccgttggg cgaaaaaacg tttcctcccg
     4441 cgcataatgg gacacaaacg cggtttggac gcattggaaa atatggtgaa gcattgcgcc
     4501 aaactgggtg tgcaatatct gaccgtgttt gccttttcaa ccgaaaactg gcgccgcccc
     4561 gaagacgaag tttcgttcct gatggggctg tttttacagg ctttgcaaaa acaggtacgc
     4621 cgtctgcacg aaaacaatat gcgcctgaaa atactgggca gccgcgaacg cttcaaccgg
     4681 cagattctgc aaggcatcga agaagcggag gcgttgacgg caaacaatac cggcctgacc
     4741 ctgagcattg ccgccgatta cggcggccgc tgggatattt tgcaggcggc aaacaaactg
     4801 attgccgaag gcgtatccga gattacagaa gacacgctgg cgaaacactt gatgctgggc
     4861 gatgcaccgg aaccggattt gttcatccgc accggcggcg aaacgcgcat cagcaatttc
     4921 ctgctctggc agatggcata tgcagaactg tatttcaccg atattttgtg gcccgatttt
     4981 gacggcaagg ctttggacga tgccgtcgct tcgttccaaa aacgcgaacg gcggttcgga
     5041 cgcacctccg agcaactgcc tatcgaacag caaaggaact gaatatgctg aaacaacggg
     5101 tgataactgc tatgtggctg ctgccgctga tgctgggcat gctgttttac gcgccgcaat
     5161 ggttgtgggc tgcattttgc ggactgattg ccctgattgc cttgtgggaa tatgcccgta
     5221 tgagcggctt gtgcaaaatc aaaaccaacc attacctcgc cgcaaccttg gttttcggcg
     5281 tggttgccta tgcgggcggc tggatgctgc ctaatttggt ttggtatgtt gttttggcat
     5341 tttggcttgc catcatgcct ttatggttga gattcaaatg gaggctcaac ggcggttggc
     5401 aggtttatgc cgtcggctgg cttttggtta tgccgttttg gttcgcgctc gtatccctgc
     5461 gcccgcatcc cgatgatgcc ctgccgctgc tcgccgtgat gggtctggtc tgggttgccg
     5521 acgtttgcgc gtatttcagc ggcaaggcgt tcggcaaaca caaaatcgcg ccggcaatca
     5581 gccccggaaa aagctgggaa ggcgcaatcg gcggcgcggt ttgcgtggcc gtgtacatga
     5641 cctccgtacg aagtgccggc tggctggcat tcgatacagg ctggttcgat accgtgttaa
     5701 tcggtttggt gttgaccgtt gtcagcgtat gcggcgacct tttggaaagc tggctcaagc
     5761 gcgcggcagg catcaaagac agcagcaagc tactgccagg acacggcggc gtgttcgacc
     5821 gtaccgacag cctgattgcc gttatcagcg tctatgcggc gatgatgtcg gttttaaatt
     5881 gattctatgc cgtctgaaaa cgcttcagac ggcatccggt ataaagttat ccccattatg
     5941 acaccacaag tcctgaccat attaggcagt accggcagca taggcgaaag cacgctggac
     6001 gttgtctccc gccaccccga aaaattccgc gtattcgcgc tggcagggca taagcaggtc
     6061 gagaaactgg cggtgcaatg ccggacgttc cgccccgaat atgccgtcgt tgccgatgcc
     6121 gaacacgccg cccggcttga agctttgttg aaaggcgacg gcacggcgac gcaggtttta
     6181 cacggcgcgc aggcattggt tgacgttgcc tctgccgacg aagtcagcgg tgtcatgtgc
     6241 gccatcgtcg gggcagtggg gctgccttcc gcgctcgcag cggcgcaaaa aggcaaaacc
     6301 atttatctgg cgaacaaaga gacgctggtg gtttccggcg cgttgtttat ggaaaccgcc
     6361 cgtgcaaacg gcgcggcagt gctgcccgtc gacagcgaac acaacgccgt tttccaagtt
     6421 ttgccgcgcg attacgccgg ccgtctgaac gaacacggca tcgcttcgat tatcctgacc
     6481 gcttccggcg gcccgtttct gaccgccgat ttaaacacgt tcgacagcat tacgcccgcc
     6541 caagcggtca aacaccccaa ttggagcatg gggcgcaaaa tttccgtcga ttccgcgtca
     6601 atgatgaata agggcttgga gttgattgag gcgcattggc tgtttaactg tccgccggaa
     6661 aaactggaag tcgtcatcca tccgcaatcc gtgattcaca gcatggtgcg ttatcgcgat
     6721 ggttcggtat tggcgcagtt gggcaatcct gatatgcgta cgcctattgc ttattgtttg
     6781 ggtttgcccg agcgcatcga ttcgggtgtc ggcgacctgg atttcgacgc attgtccgcg
     6841 ctgaccttcc aaaagcccga ctttgaccgc ttcccctgcc tgaagctcgc ctatgaagcc
     6901 atgaacgcag gcggagccgc gccctgcgta ttgaacgccg ccaacgaagc cgccgtcgcc
     6961 gcctttttgg acggacagat taagtttacc gacattgcca aaaccgtcgc ccattgtctt
     7021 tcacaagact tttcagacgg cataggcgac ataggggggc tcttggcgca agatgcccgg
     7081 acacgcgcac aagcgcgggc atttatcggc acactgcgct gatgccgtct gaacaccgtt
     7141 atcaaaggaa aaccatttgc acacccttct agcttttatc ttcgccatcc tgattttggt
     7201 cagcctgcac gagttcggac actacatcgt tgccagattg tgcggcgtca aagtcgtacg
     7261 cttttccgtc ggcttcggca aaccgttttt cacccgaaag cgcggcgaca ccgaatggtg
     7321 cctcgccccg attccgttgg gcggttacgt caaaatggtc gatacgcgcg aaggcgaagt
     7381 atcagaagcc gatttaccct acgcttttga caaacaacac cccgccaaac gcatcgccat
     7441 cgtcgccgcc ggcccgctga ccaatctcgc actggcggtt ttgctgtacg gactgagctt
     7501 ttccttcggc gtaaccgaac tgcgccccta tgtcggcaca gtcgaacccg acaccattgc
     7561 cgcccgcgcc ggcttccaaa gcggcgacaa aatacaatcc gtcaacggca cacccgttgc
     7621 agattggggc agcgcgcaaa ccgaaatcgt cctcaacctc gaagccggca aagtcgccgt
     7681 cggcgttcag acggcatcag gcgcgcaaac cgtccgcacc atcgatgccg caggcacgcc
     7741 ggaagccgat aaaatcgcaa aaaaccaagg ctacatcgga ctgatgccct ttaaaatcac
     7801 aaccgttgcc ggtggcgtgg aaaaaggcag ccccgccgaa aaagcaggcc tgaaaccggg
     7861 cgacaggctg actgccgccg acggcaaacc catcgcctca tggcaagaat gggcaaacct
     7921 gacccgccaa agccccggca aaaaaatcac cctgacctac gaacgcgccg gacaaaccca
     7981 taccgccgac atccgccccg atactgtcga acagcccgac cacaccctaa tcgggcgcgt
     8041 cggcctccgt ccgcagccgg acagggcgtg ggacgcgcaa atccgccgca gctaccgtcc
     8101 gtctgttgtc cgcgcattcg gcatgggctg ggaaaaaacc gtttcccact cgtggacaac
     8161 cctcaaattt ttcggcaaac taatcagcgg caacgcctcc gtcagccata tttccggtcc
     8221 gctgaccatt gccgatattg ccggacagtc cgccgaactc ggcttgcaaa gttatttgga
     8281 atttttggca ctggtcagca tcagcctcgg cgtgctgaac ctgctgcccg tccccgtttt
     8341 ggacggcggc cacctcgtgt tttatactgc cgaatggata cgcggcaaac ctttgggcga
     8401 acgcgtccaa aacatcggtt tgcgcttcgg gctcgccctg atgatgctga tgatggcggt
     8461 cgccttcttc aacgacgtta cccggctgct cggttagatt ttacgtttcg gaatgccgtc
     8521 tgaaaccgca ttccgcacca caaggaactg acaatgaaac tgaaacagat tgcttccgca
     8581 ctgatggtct tgggcatatc gcctttggca cttgccgact tcaccatcca agacatccgc
     8641 gtcgaaggct tgcagcgtac cgagccgagc accgtattca actacctgcc cgtcaaagtc
     8701 ggcgacacct acaacgacac acacggcagt gccatcatca aaagcctgta cgccaccggt
     8761 ttctttgacg acgtacgcgt cgagactgcg gacgggcagc tcctgctgac cgttatcgaa
     8821 cgccccacca tcggctcgct caacatcacc ggcgcaaaaa tgctgcaaaa cgacgccatt
     8881 aagaaaaacc tcgaatcgtt cgggctggcg cagtcgcaat actttaatca ggcgacactc
     8941 aatcaggcag tcgccggcct gaaagaagaa tacctcgggc gcggcaaact caatatccaa
     9001 atcacgccca aagtaaccaa actcgcccgc aaccgcgtcg acatcgacat cacgattgac
     9061 gagggcaaat ccgccaaaat caccgacatc gaatttgaag gcaaccaagt ctattccgac
     9121 cgcaaactga tgcggcagat gtcgctgacc gaaggcggca tttggacatg gctgacacga
     9181 agcaaccaat tcaacgagca gaaatttgcc caagacatgg aaaaagtaac cgacttctac
     9241 cagaacaacg gctacttcga tttccgcatc ctcgataccg acatccaaac caacgaagac
     9301 aaaaccaagc agaccatcaa aatcaccgtc cacgaaggcg gacgtttccg ttggggcaaa
     9361 gtctccatcg aaggcgacac caacgaagtc cccaaagccg aactggaaaa gctgctgacc
     9421 atgaagcccg gcaaatggta cgaacgccag cagatgaccg ccgttttggg tgagattcag
     9481 aaccgcatgg gctcggcagg ctacgcatac agcgaaatca gcgtacagcc gctgccaaac
     9541 gccgaaacca aaaccgtcga tttcgtcctg cacatcgaac cgggccggaa aatctacgtc
     9601 aacgaaatcc acatcaccgg caacaacaaa acccgcgacg aagtcgtgcg ccgcgaattg
     9661 cgccaaatgg aatccgcgcc ttacgacact tccaagctgc aacgctccaa agagcgcgtc
     9721 gagcttttag gctacttcga caatgtccag tttgacgccg tcccgcttgc cggcacaccc
     9781 gacaaagtcg atttgaacat gagcctgacc gaacgttcca ccggctcgct cgacttgagc
     9841 gcgggctggg tacaggatac cggcctggtc atgtccgcag gcgtttccca agacaacctg
     9901 ttcggtacgg gcaagtcggc cgccctgcgc gcctcacgaa gcaaaaccac gctcaacggc
     9961 tcgctgtcgt ttaccgaccc gtacttcacg gcagacgggg tcagcctggg ctacgatgtt
    10021 tacggaaaag ccttcgaccc gcgcaaagca tcgaccagca tcaaacaata taaaaccacc
    10081 acggcaggcg caggcatccg catgagcgtg cctgttaccg aatacgaccg cgtgaatttc
    10141 ggtttggtgg cagaacacct gaccgtcaac acctacaaca aagcgcccaa acactatgcc
    10201 gactttatca agaaatacgg caaaaccgac ggcacagacg gcagcttcaa aggctggctg
    10261 tacaaaggta ccgtcggctg ggggcgcaac aaaaccgaca gcgcgttatg gccgacacgc
    10321 ggctacctga cgggcgtgaa cgccgaaatc gccctgcccg gcagcaaact gcaatactac
    10381 tccgccaccc acaaccaaac ctggttcttc cccctgagca aaaccttcac actgatgctt
    10441 ggcggcgaaa tcggctatgc caacggctac ggcaaaacca aagaaatccc cttctttgaa
    10501 aacttctacg gcggcggcct gggttcggta cgaggttacg aaagcggcac actcggtccg
    10561 aaagtctatg acgaatacgg cgaaaaaatc agctacggcg gcaacaaaaa agccaacgtc
    10621 tccgccgagc tgctcttccc gatgcccggc gcgaaagacg tgcgcaccgt ccgcctgagc
    10681 ctgtttgccg acgcaggcag cgtgtgggac ggcaaaacct acgacgacaa cagcagttcc
    10741 gcgaccggcg gcagggttca aaacatttac ggcgccggca atacccataa atccaccttt
    10801 accaacgaat tgcgctattc cgccggcggc gcggttacct ggctctcgcc tttaggcccg
    10861 atgaaattca gctacgccta cccgctgaag aaaaaaccgg aagacgaaat ccaacgcttc
    10921 caattccaac tcggcacgac gttctaatcc cgcaaatgcc gtctgaagcc cttcagacgg
    10981 catttcgcgg caacattcga aggagtttta ccatgacccg tttgacccgc gcgtttgccg
    11041 cggctctgat cggtttgtgc tgcaccgcag gcgcgcacgc cgacaccttc caaaaaatcg
    11101 gctttatcaa caccgagcgc atctacctcg aatccaagca ggcgcgcaag attcaaaaaa
    11161 cgctggacag cgaattttcc gctcgtcagg acgaattgca aaaactgcaa cgcgaaggtc
    11221 tggatttgga aaggcagctt gccgaaggca aactcagaaa cgcaaaaaag gcgcaagccg
    11281 aagaaaaatg gcgcgggctg gtcgcagcgt tccgcaaaaa acaggcgcag tttgaagaag
    11341 actacaacct ccgccgcaac gaagagtttg cctccctcca gcaaaacgcc aaccgcgtca
    11401 tcgtcaaaat cgccaaacag gaaggttacg atgtcatttt gcagaacgtg atttacgtca
    11461 acacccaata cgacgttact gacagcgtca ttaaagaaat gaacgcccgc tgaccctttc
    11521 agacggcata ccgaacagga aaaccatgat tccggccacc tacaccctgt cccaaatcac
    11581 cgcgcggctc ggcggcgaat ggcgcggcga ggacatttcc gttaccgccg tgcgcccgct
    11641 cgcagacgcg caggcggaac acatcagctt ccttgccaat ccgaaataca aagccgaagt
    11701 ccacgacagc agcgcgggcg cggtcatcgt ttccgccaaa gcggcagacg gatttgaagg
    11761 gcgcaacctg attgtcgccg acgaccccta tctctatttc gccaaagtcg cccgcctgtt
    11821 ttcacccgtc gtcaaagcgc acggcggcat ccatccgacc gccgtcgtcg aaccgagtgc
    11881 caccgttccc gcaagctgcg aaatcggcgc gaacgcctac atcggcgcaa acaccgtgct
    11941 cggcgaaggc tgccgcatct tggcaaacgc cgtcgtccaa cacgattgca aactgggcga
    12001 cgaagtcgtc atgcacccca acgccgtcgt ttattacggc tgtacactgg gcagacgcgt
    12061 cgaaatccac agcggcgcag tcatcggcgc ggacggtttc ggactcgcct tcgccggcga
    12121 ttcgtggttt aaaatcccgc aaaccggcgc ggtaacgctg ggcgacgacg tggaaatcgg
    12181 ctcgaacacc aacatcgacc ggggcgcgat gagcgacacc accgtcggca acggcaccaa
    12241 aatcgacaac caagtccaaa tcggacacaa ctgcaaaatc ggttcgcaca ccgtcatcgc
    12301 cgccaaaacc ggcatctcag gcagcgtaac cataggcagc tactgcatca tcggcggcgg
    12361 tgtcggcacg gtcggacaca tcgaaatcgc cgacaaaacc accatcggcg gcggcacgtc
    12421 cgtcacccac agcattaccg aaagcggcaa acacctcgcc ggcatcttcc cgatgtccac
    12481 ccataaagaa tgggcgcgca acgccgtcca tatccaccgc ttaagcgaaa tgaacaaacg
    12541 cctcaaaacg ctggaacagc agctttcaga cggcaaagac acgcaataaa tccaaaccga
    12601 ttttattcaa ggaatacgac agacatggac gtacaactcc ccatcgaagc caaagacatc
    12661 caaaaactca tcccccaccg ctatccgttt ctccagctcg accgcatcac cgccttcgag
    12721 ccgatgaaaa ccctgaccgc gattaaaaac gtcagcataa acgagcccca gttccaaggc
    12781 cactttcccg acctgcccgt gatgcccggc gtactcatca tcgaagcgat ggcgcaagcc
    12841 tgcggcacac tcgccatcct cagcgaaggc ggccgcaagg aaaacgaatt cttcttcttc
    12901 gctggcatag acgaagcccg tttcaaacgc caagtcatcc ccggcgacca actcgtcttt
    12961 gaagtcgagc tgctgaccag ccggcgcggc atcggcaaat tcaacgccgt tgccaaagtg
    13021 gacgggcaag tcgccgtcga agccatcatc atgtgtgcca aacgcgtggt ttgagcgttc
    13081 ggaaaaaggt cgtctgaaag tttcagacga cctaataaaa agaaaaccca ccggtttagg
    13141 tttattcaaa cccagggaca cggtggggat tagttttacc taactgtatc aaatatagtt
    13201 tgaaacgtca atttaaaaat aaagaatcag gtgttagcgt ggattataag gaatgctgta
    13261 gtattttttc tgatttcaga atggaacggt ataaaaatgc cgttggggaa gacaaagcag
    13321 ctgaattgta tttattgaat ttatctttat caagagaact ttttcatgtt gtttcaatat
    13381 ttgagattgt tttaagaaac aaaattgaca tttgccttca gcaggcgttt aaagacagaa
    13441 actggttata taacagcata cagccacaga cgaatcccgc attaaaatat caaggttgct
    13501 ttttaagaaa tggcacgaaa gaatctgctg aattaatcaa ggttgcatta tctaaaatac
    13561 aaaataatag cgggggaaag tttgaccaca accaattggt tgcaggacta ggattcggtt
    13621 tttggcggta tctgtttgca ggagggaaag atgcccaatt tgatgctaca gggaaagtat
    13681 tgatgaaagt ttttccaaaa aagcccaaat ctacaccaag tgtgcaatat aaccaaaaat
    13741 ggatttttcg agaactttcc aatattaaca aattccgtaa tcgtttggca catcacgagc
    13801 cgatttgttt taaaggtgca ataaaagata ccaactacgc tagaaatatt caccaatcta
    13861 tttttgaact gcttaattac atggatgtag atactgcttc agtatttagc cattttagcg
    13921 atcaagtgat tgcggtctgc gatgaaatcg acaaactgta attttctatt atttgtctta
    13981 acaagcagcg gagtattcaa aacatgaccc tcatccaccc gaccgccgtc atcgacccca
    14041 aagccgaact cgactccagc gtcaaagtcg gcgcgtacac cgtcatcggc cccaacgtcc
    14101 aaatcggcgc gaataccgaa atcggcccgc acgccgtcat caacggccac accagcatcg
    14161 gcgaaaacaa ccgcattttc caatttgcca gcctcggcga aatcccgcag gacaaaaaat
    14221 accgcgacga gccgaccaag ctgattatcg gcaacggcaa caccatccgc gaattcacca
    14281 cctttaattt aggcacggta accggcatcg gcgaaacccg tatcggcgac gacaactgga
    14341 ttatggcgta ctgccacctc gcgcacgact gcgtggtcgg caaccacacc atcttcgcca
    14401 acaacgcctc gcttgccgga cacgttacca tcggcgacta cgtcgttttg ggcggctaca
    14461 cgctggtttt ccaattctgc cgcatcggcg actacgccat gaccgcgttt gccgcaggcg
    14521 tacacaaaga cgtgccgccc tactttatgg catcgggcta ccgcgccgaa ccggcggggc
    14581 tcaacagcga aggcatgcgc cgcaacggtt ttaccgcaga gcagatttcc gccgtcaaag
    14641 acgtgtacaa aaccctctac catcgcggca ttccgtttga agaagccaag gcagacattc
    14701 tccgccacgc cgaaacccaa gccgagcttg ccgtattccg agactttttc gcacaatcgg
    14761 cacgcggcat catccgctga ccgtaccctt ttgatgccgt ctgaaacccc gacagcgttt
    14821 cagacggcat cggttttttt aaagcggtat attgtttgat cgatgcatca ttttgtagat
    14881 ttcagaagta tggcagtcgg cagcattgat gatttctgcc gcccgccaca tccccattcg
    14941 gacatttcat tgtgacctcc gccgctgctt ttaaagaatt gcaaacaatt tccgcagctt
    15001 gaaccggcct gttttcggcg aaaaaaacca aaagtatttt tcaaaagaac atattgtctt
    15061 attggatatt ctgtgctgaa attactggac actacaaaag tggtgtttta aaaataaaac
    15121 agacaaagga gaaagccatg caagtgtttt tagacaatcc caaagccttt tttgaaaccg
    15181 tcagcggctg ggtttgggga cctgttatgt tgatgctgct ggtcggcacg ggtattttgc
    15241 tgactgtttt attaaaaggt ttgcagttca cgatgttggg ttatgcgctg aaacaggcgt
    15301 ttgtgccgcc aaagaagcat aaaagcggcg aaggccacga aggcgatatt tcccatttcg
    15361 cggcgttgat gaccgcgctg tccgccacca tcggtacggg taacatcgcc ggcgtggcga
    15421 ctgcggtggt aaccggcggc ccgggcgcgg tattttggat gtggatgacc gccattttcg
    15481 gcatggccac caaatacggc gaaggcgtgt tggcggtgaa ataccgcgtc aacaattcca
    15541 aaggcgaaat gtccggcggc ccgatgtatt acatcgaaaa aggcttgggc aaaaactgga
    15601 aatggatggc cgtcgcgttt gcgctgttcg gcacattcgc ttccttcggt atcggcagct
    15661 cggtgcagtc caactcggtt gcacaggcgg tgcaaaccag cttcggtatc gaacctgcct
    15721 ataccggcat tacgttgacc gttctgactg ccgttgtcgt tttaggtggt attaaaggca
    15781 tcgccaaagc cgcttctttc atcgtgcctg ctatggcggt gttttatgtg ttgggcggtc
    15841 tttccattat cgcgattaat tccgatgcac tgatgcctgc cgtcaagctg attttctccg
    15901 atgcgttcag cgcgcaggca gtggcgggcg gtgctatcgg tacggtcatc cgctacggcg
    15961 tggcgcgcgg cgtgttctcc aatgaggcag gtatgggttc tgcgcctatt gccgccgcag
    16021 ccgcgaaaac cgaccatccc gtccgtcagg ccttggtttc tatgaccggt acgtttttgg
    16081 ataccatcgt cgtttgctcg attaccggca tcgtgttggt aatgggactg ctcggcgcgg
    16141 gcggcgagtt tgtcaaacct gaagtgagcg gcgcggcact gacaaccgtc acattccaaa
    16201 aaatgctgcc cggcatcggc ggctggattg tcaccatcgg cctgattttc tttgcctact
    16261 caaccattct cggctggtgc tattacggcg aaaaatgcgc ggtgtatgtt ttcggcgaga
    16321 aatttgccgg tttgtaccgc gtcggttatg tttcttccgt tatgctgggt accgtgttga
    16381 gccttgattt ggtgtggctg gcttcggaca cattcaacgg cttgatggca ttgcccaacc
    16441 tgattgcact tttattgatg gcgaaagtca tcgtccatga aacgcgcgac ttcaaacaaa
    16501 aaatcacaaa cggcgaattg ccgcattaat atccgaggcc gtctgaatcc gaatattcag
    16561 acggcacggc atattaagtc tgttttgaaa aagccggagg gagaaacatg aaagtgcttg
    16621 ttttaggtgc gggtgttgcc ggcgtgtctt ccgcgtggta tctggcagag gcaggacatg
    16681 aagtaacggt catcgaccgc gccgagggtg tggcgatgga aaccagtttt gccaacgcag
    16741 gccagctttc ttacggctat accacgcctt gggctgcacc cggtatcccg accaaagcgc
    16801 tgaaatggct gtttaaaagc catccgcctt tgctgtttcg ccccgacggc agcctgtatc
    16861 aaatcgaatg gctgtggcaa atgctgcaaa actgcacggc agcgcactat caaaccaata
    16921 aagagcgcat ggtcaggatt tccgaatata gccgtgaaat gttccgccgt tttgaagcgc
    16981 aaaccggcat gaattttgag gaacgcaaaa aagggacgtt gcagattttc cgccaaacca
    17041 aagaagtcga agcggcagaa caagacattg ccgttttgga acgctacggc gtgccgtacc
    17101 gccgtctgaa acccgaagaa tgtgcagaat ttgagcctgc gctggcacgc gttaccgcca
    17161 aaattgccgg cggcctgcac ctgcctgcag atgcgaccgg cgactgccac ctcttcaccg
    17221 aaaacctata caaattgtgt caggaaaagg gcgtacagtt tcatttcaac caaaccatca
    17281 gccgcatcga ccataacggg ctgcgcatca aagccgttga aaccgaaaca gggcggtttg
    17341 aagcagatgc cgttgtctgt gcgctcggct gcttcagtag gactgtgttg gcgcagttgg
    17401 atctcaatct gccgatttat cccgtcaaag gctattcctt gaccctgccg gtcaccaatt
    17461 cagacggcgc gccggtgtcc accgttttgg atgaaagcta caaagtcgct atcacgcgct
    17521 ttgacaacag aatccgcgtc ggcggcatgg cagaattgtc gggctacgaa atcaaactgc
    17581 ccgaaaaacg ccgcgaaacc ttggctttgg tcgtcaacga tttgttcccg gaaggcggcg
    17641 atttgagcca agcattgttc tggagcggcc tcagaccgat gacgcccgac agcacgccgt
    17701 taatcggccg cacccgcttt gaaaacttat tcttgaatac aggccacggc actttgggct
    17761 ggaccatgtc gctgggttcg gcaaaattaa ccgccgatat cgtgagcggc aaagacaccg
    17821 aaatccgcag cgacgatttg agcctgtcgc gttatcaggc ttaagctgga aagcactaag
    17881 gtttagcggc atttcaaatt taaaggccgt ctgaaaatca tttttcagac ggtcttttgt
    17941 ttcaaaatcc gtgtatccaa tcaataaaat aaataataac tattatcata tacattaaaa
    18001 agtgttagtc tgaacctgtc ccagctttta gcgcaggttt tctcatgccc gatttttcga
    18061 tgtccaattt ggccgttgcc ttttccatca cattggctgc cggtttgttt accgtattag
    18121 gcagtggctt ggtgatgttt tccaaaacgc ccaatccgcg tgtgttgtcg tttggtttgg
    18181 cgtttgccgg cggtgcgatg gtatatgttt ccctgacgga gattttcagt aaatccagcg
    18241 aggcgttcgc tgaaatttat gataaagacc acgcgtttgc ggcggcgacc atggcatttt
    18301 tggccggtat gggcggcatt gcgctgattg accgcctggt gccgaaccca catgaaactt
    18361 tagacgcgca agacccgtcg tttcaagaaa gtaaacgccg ccatattgcg cgagtcggca
    18421 tgatggcggc gtttgcgatt acggcgcaca actttcccga aggtttggcg acgttttttg
    18481 ccaccttgga aaatccggcg gtcgggatgc ctttggcctt ggcgattgcc atccataata
    18541 ttccggaggg catttccatc gccgcgccgg tttattttgc cacccgcagc cgtaagaaaa
    18601 cggtatgggc gtgtctgcta tccggcttgg ccgagccgtt gggggcggct ttgggctatt
    18661 tggttttgca gccgtttttg tcgcctgccg tgtttggttc ggtattcggc gtgatagccg
    18721 gtgtgatggt gtttttggcg ttggacgagc tgctgccggc tgccaaacgc tattcagacg
    18781 gccatgaaac cgtttacggc ctgacaatgg gcatggcggt gattgccgtc agcctggtat
    18841 tgttccattt ttaaaacctg tatgccaaag gccgtctgaa atgattcaga cggccttttt
    18901 gcgttataat ccgcacatca aaaataacct taatttcaca aagttccatc atgttagaca
    18961 aatacaatcc agccgaaatc gaatccaaac attatcaaaa ctgggaagag cagggctatt
    19021 tccagcctga tatggatttg accaaaccgt ctttctccat ccaactgccg ccgcccaacg
    19081 taaccggcac gctgcacatg ggtcatgcct tcaaccaaac cattatggac ggcctgaccc
    19141 gctactaccg catgaaaggc tgcaacaccg cttggattcc cggcaccgac cacgcaggca
    19201 tcgccacgca aatcgtggtc gagcgtcagc ttgccgcgca aaacgtgtcc cgtcatgact
    19261 tggggcgcga aaaattcttg gaaaaagtgt gggaatggaa agaagtttcc ggcggcacga
    19321 ttacccagca gatgcgccgc gtgggctgct ctgccgactg gacgcgcgag tatttcacga
    19381 tggacgacgt gcgcgccgaa accgtgaccg aagtgttcgt gcgcctgtat gagcaaggct
    19441 tgatttaccg cggcaaacgc ttggtgaact gggatccggt attgggtacg gcagtatcgg
    19501 atttggaagt ggaaagcgtg gaagaacaag gctctatgtg gcacatccgc tatccgctgg
    19561 cggacaatcc tgccgaagcc gtgattgtgg cgaccacccg ccccgaaacg ctgctgggcg
    19621 acgttgccgt tgccgtcaat cccgaagacg aacgttatac ccatttgatt ggcaaggaat
    19681 taatcctgcc gctgaccggc cgcaccattc ccgtgattgc cgacgaatac gtcgaaaaag
    19741 acttcggcac aggctgcgta aaaatcacgc ccgcgcacga cttcaacgac tacgaagtcg
    19801 gcaaacgcca cgacacgcgc ctgattaatg tgttcgactt ggaagccaaa gtgctggcaa
    19861 acgccgaagt gttcaacttc aaaggcgaag cgcaaccagg ctttgccctg cctgaaaaat
    19921 acgcaggctt ggaccgcttt gccgcgcgca aacaaatggt tgccgatttg caggaacaag
    19981 gcttgttggt cgaaatcaaa gcgcacacgc tgatgacgcc gaaaggcgac cgaacaggct
    20041 cagtgattga gccgatgctg accagccaat ggtttgtcgc catgtccgcc acaccgaacg
    20101 gcggcgagcc tgacagcgaa ttcaaaggct tgagcctcgc cgacaaagcc aaaaaagccg
    20161 tcgacagcgg cacggtacgc tttatccccg aaaactgggt caacacttac aaccaatgga
    20221 tgaacaacat ccaagactgg tgtatctcgc gccaactgtg gtggggccat caaattcctg
    20281 cgtggtatga cgaagcaggc aatgtttacg tcgcccgcaa tcaggcggaa gccgaaaaac
    20341 aagccggcaa aaccggtttg acccgcgaag aagacgtatt agacacatgg ttctcctccg
    20401 cgctcgtgcc gttctccacg ctcggctggc cgtctgaaac cgacgaactc aaagccttcc
    20461 tgccgtccaa cgtcttggta acaggctacg aaatcatctt cttctgggtg gcgcgtatga
    20521 ttatgatgac cacccacttc accggcaaag taccgtttaa agacgtgtac atccacggca
    20581 tcgtgcgcga ccacgaaggc aaaaaaatgt ccaaatccga aggcaacgtc atcgaccccg
    20641 tcgatttgat tgacggtatc gacttggaca aactgctggt gaaacgtacc accggcctgc
    20701 gcaaacccga aactgcgccg aaagtggaag aagccacgaa aaaactcttc cccgaaggca
    20761 tccccagcat gggtgcggac gctttgcgct tcactatggc gagctacgcc agcttggggc
    20821 gttcggtcaa cttcgacttc aaacgcgccg aaggctaccg caacttctgc aacaaaatct
    20881 ggaacgccac caacttcgtc ttgatgaaca ccgaaaacca agactgcggc tacggcgcaa
    20941 ccgctgccga accgcgcggc tattccttcc ccgatatgtg gattgtaggc cgtctgaatc
    21001 agaccatcga gcaggttacg caagcctacg aaacctaccg ctttgatttg gcggcagaaa
    21061 ccctgtacag cttcgtatgg aacgactatt gcgactggta tttggaactt gccaaagtgc
    21121 agcttcaaac cggctgcgcc agccgccaac gcgccacacg ccataccttg ttgcgcgtac
    21181 tcgaagccgc cctgcgcctg ctgcacccga ttatcccgtt catcaccgaa gaattgtggc
    21241 aaaccgtcgc tcctatgtgc gacgcgaaaa ccgccgacag catcatgctc gcccgcttcc
    21301 ccgaagccga cggcggcgat attgttcaga cggcattcga gcaaatgacc gtgttgcagg
    21361 atttgattgg cgcagtccgc aacctgcgcg gcgaaatggg catccagccc aatgtgaaag
    21421 ccccgctgtt tgtcgaaagc gcagacgact tggcggacta cctcaaatac ctgccgatga
    21481 tgacccgcct gatcgaagca cagcaagtcg ccgccctacc cgaaagcgaa gacgcgcccg
    21541 tcgccgtctg caacggcgcg cgcctgatgt tgaaagtcga aatcgacaaa gctgcggaaa
    21601 ccgcccgttt gagcaaagaa gccgagaagc tgcaaaaagc cttggacaaa ctcaacgcca
    21661 aactctccaa acccggctac accgaaaaag ccccagcgca tttggtggaa aaagacaaag
    21721 ccgatttggc ggaattggaa gacaaaatgg caaaagtgca aactcagttg tcgaagttga
    21781 aagactgatt tgattgaatc aacaaggccg tctgaaaaat gt
//
LOCUS       DAWGKF010000014        21751 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.014, whole genome shotgun sequence.
ACCESSION   DAWGKF010000014 DAWGKF010000000
VERSION     DAWGKF010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21751)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21751)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21751
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.014"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..808
                     /locus_tag="WHR07_000382"
     CDS             <1..808
                     /locus_tag="WHR07_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ2129641.1"
                     /translation="RYRTPNIKYIYQDNQGTAEARNTGIKNSNGKYIVFIDSDDFINC
                     QVLLDFLSKDDIDMPDVVFLNAVKYDKGSVSHFGEDYQPEKILNQSKVEVLKGLCRFR
                     KFPGSACNKIIKRELIIKEKLFFEKEVYAEDIEWSMRLFNAATTFSYLDGCYYYYRQG
                     RKDSKTGTVSEKSIKSLLYILEKNAEMEFNRDISSYLYSFLSYEYLVLLFIMTSKNIE
                     CDADIKRRAYHLRFMLLKSNKLIYKLIFPIITLFGVDITGRILKAIRGNI"
     gene            849..1379
                     /locus_tag="WHR07_000383"
     CDS             849..1379
                     /locus_tag="WHR07_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HEZ2129642.1"
                     /translation="MNAIRTFQNRTPEIHESCMIDEACVVIGEVSLAEDVSVWPCAVL
                     RGDVNSITVGARSNIQDGSVLHVSHKTAAKPEGSPLVIGEDVTVGHKVMLHGCRIGNR
                     VLVGMGTTVLDDAVIEDEVMIGAGSLVPPRKRLAGGYLYVGSPVRQVRVLTDEEKAFL
                     KYSAAHYVKLSKQYGM"
     gene            complement(1390..1529)
                     /locus_tag="WHR07_000384"
                     /pseudo
     CDS             complement(1390..1529)
                     /locus_tag="WHR07_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575226.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor"
     gene            complement(1548..3143)
                     /locus_tag="WHR07_000385"
     CDS             complement(1548..3143)
                     /locus_tag="WHR07_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HEZ2129643.1"
                     /translation="MSQEILDQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGT
                     VKGKKTGKFATSDWMDIEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVL
                     TAVDSALMVIDAAKGVEAQTIKLLNVCRLRDTPIVTFMNKYDREVRDSLELLDEVENI
                     LQIRCAPVTWPIGMGKNFKGVYHILNDEIYLFEAGGERLPHEFDIIKGIDNPELEQRF
                     PLEIQQLRDEIELVQAASNEFNLDEFLAGELTPVFFGSAINNFGIQEILNSLIDWAPA
                     PKPRDATVRMVEPDEAKFSGFIFKIQANMDPKHRDRIAFLRVCSGKFERGMKMKHLRI
                     NREIAASSVVTFMSHDRELVEEAYAGDIIGIPNHGNIQIGDSFSEGEQLAFTGIPFFA
                     PELFRSVRIKNPLKIKQLQKGLQQLGEEGAVQVFKPMSGADLILGAVGVLQFEVVTSR
                     LANEYGVEAVFDSASIWSARWVSCDDKKKLAEFEKANAGNLAIDAGGNLAYLAPNRVN
                     LGLTQERWPDIVFHETREHSVKL"
     gene            complement(3250..3645)
                     /gene="hisI"
                     /locus_tag="WHR07_000386"
     CDS             complement(3250..3645)
                     /gene="hisI"
                     /locus_tag="WHR07_000386"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HEZ2129644.1"
                     /translation="MDKNLLEAVKFDEKGLVCAIAQDAETKRVLMVAWMNAEALQKTV
                     ETGFAHYYSRSRQKQWMKGEESGHTQKVRELRLDCDGDAIVMLIAQNGGIACHTGRES
                     CFYKVWRGSAWETADAVLKDEKEIYGSTH"
     gene            complement(3676..4443)
                     /gene="hisF"
                     /locus_tag="WHR07_000387"
     CDS             complement(3676..4443)
                     /gene="hisF"
                     /locus_tag="WHR07_000387"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HEZ2129645.1"
                     /translation="MALAKRIIPCLDVKDGRVVKGVNFIGLRDAGDPVEAAKRYNGEG
                     ADELTFLDITASSDNRDTILHIIEEVAGQVFIPLTVGGGVRTVADIRRLLNAGADKVS
                     INTAAVTRPDLIDEAAGFFGSQAIVAAVDAKAVNSENTRWEIFTHGGRNPTGLDAVEW
                     AIEMQKRGAGEILLTGMDRDGTKQGFNLPLTRAVAEAVDIPVIASGGVGNVRHLIEGI
                     TEGKADAVLAAGIFHFGEIAIREAKRAMREAGIEVRL"
     gene            complement(4456..5193)
                     /gene="hisA"
                     /locus_tag="WHR07_000388"
     CDS             complement(4456..5193)
                     /gene="hisA"
                     /locus_tag="WHR07_000388"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HEZ2129646.1"
                     /translation="MLLIPAIDLKEGRCVRLRQGLMEEATVFSDSPAETALHWFEQGA
                     RRLHLVDLNGAFAGVPQNLPAIKDILAAVAKDIPVQLGGGIRDLKTIGQYLDLGLNDV
                     IIGTAAVKNPDFVREACKAFPGRIIVGLDAKDGMAAIDGWATVTGHHVIDLAKRFEDD
                     GVNSIIYTDIGRDGMMSGVNIDATVKLAQAVRIPVIASGGLTGLDDIRALCAAEKHGV
                     AGAITGRAIYEGSIDFAQAQQLADSLD"
     gene            complement(5226..5864)
                     /gene="hisH"
                     /locus_tag="WHR07_000389"
     CDS             complement(5226..5864)
                     /gene="hisH"
                     /locus_tag="WHR07_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEZ2129647.1"
                     /translation="MQIAIIDYGMGNLHSVLKSVWTAGQLAGKNTEIFLSGDPDRVSR
                     ADKVIFPGQGAMPDCIAALTRGGLDEAVKDALKNKPFFGICVGAQLLFDHSEEGNTDG
                     LGWFGGKVRRFERDLRDPQGCRLKVPHMGWNTVRQTQNHPLFQGIPQDTRFYFVHSYY
                     FAPENPETILGESDYPSPFACIVGKDNVFATQFHTEKSHDAGLTMLKNFLNW"
     gene            complement(5995..7497)
                     /gene="pta"
                     /locus_tag="WHR07_000390"
     CDS             complement(5995..7497)
                     /gene="pta"
                     /locus_tag="WHR07_000390"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HEZ2129648.1"
                     /translation="MAKVLIVPVSAGLDASAAAQAFAKALDAQIFQAVDATAETLLAQ
                     GKSDDWFDALVGKVAALDAANLVIEGIAPDADKIYLAGKNVELALSLDAAAVFAVRSD
                     NADADELANRLNLAKQFFAAAPGVLEGFVVDGAAASVAEAAAEKTGLTFFGSSDALKD
                     VSVLAGREAKRLSPAQFRYNLIDFARQADKRIVLPEGAEPRTVQAAAICHEKGIARCV
                     LLAKREEVEAVAKERGISLPDSLEIIDPASLVEQYVGPMCELRKSKGLTPEDARKQLQ
                     DTVVLGTMMMAQNDVDGLVSGAVHTTANTIRPALQLIKTAPGASLVSSVFFMLLPNQV
                     LVFGDCAVNPNPTAQQLADIAIQSADSAKAFGIDPKVAMISYSTVNSGSGPDVDTVIE
                     ATKLAREKRPDLAIDGPLQYDAATVPGVGKSKAPGSPVAGQATVLVFPDLNTGNCTYK
                     AVQRSANVLSVGPLLQGLRKPVNDLSRGALVEDIVFTIALTAVQAKQMEG"
     gene            complement(7682..8740)
                     /gene="fbpC"
                     /locus_tag="WHR07_000391"
     CDS             complement(7682..8740)
                     /gene="fbpC"
                     /locus_tag="WHR07_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter ATP-binding protein FbpC"
                     /protein_id="HEZ2129649.1"
                     /translation="MTAALHIGHLSKSFQNTPVLNDISLSLDPGEILFIVGASGCGKT
                     TLLRCLAGFEQPDFGEISLSGRTIFSKNTNLPVRERRLGYVVQEGVLFPHLTVYRNTA
                     YGLGNGKGKTAQERQRIEAMLELTGISELAGRYPHELSGGQQQRVALARALAPDPELI
                     LLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDREEALQYADRIAVMKQGRIL
                     QTASPHELYRQPADLDAALFIGEGIVFPAALNADGTADCGLGRLPVQSGAPAGTRGTL
                     LIRPEQFSLHPHSAPTASIHAVVLKTTPKARHTEISLRVGQTVLTLNLPSAPTLSDGI
                     SAVLHLDGPALFFPGNTL"
     gene            complement(8761..10278)
                     /gene="fbpB"
                     /locus_tag="WHR07_000392"
     CDS             complement(8761..10278)
                     /gene="fbpB"
                     /locus_tag="WHR07_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease FbpB"
                     /protein_id="HEZ2129650.1"
                     /translation="MSPKKIPIWLTGLILLIALPLTLPFLYVAMRSWQVGINLAVELL
                     FRPRMWDLLSNTLTMMAGVTLISIVLGIACALLFQRYRFFGKTFFQTAITLPLCIPAF
                     VSCFTWISLTFRVEGFWGTVMIMSLSSFPLAYLPVEAALKRISLSYEEVSLSLGKSRL
                     QTFFSAILPQLKPAIGSSVLLIALHMLVEFGAVSILNYPTFTTAIFQEYEMSYNNNTA
                     ALLSAVLMAVCGIVVFGESIFRGKAKIYHSGKGVARPYPVKTLKLPGQIGAIVFLSSL
                     LTLGIIIPFGVLIHWMMVGTSGTFALVSVFDAFIRSLSVSALGAILTILCALPLVWAS
                     VRYRNFLTVWIDRLPFLLHAVPGLVIALSLVYFSINYTPAVYQTFIVVILAYFMLYLP
                     MAQTTLRTSLEQLPKGMEQVGATLGRGHFFIFRTLVLPSILPGITAAFALVFLKLMKE
                     LTATLLLTTDDVHTLSTAVWEYTSDAQYAAATPYALMLVLFSGIPVFLLKKYAFK"
     gene            complement(10346..11341)
                     /gene="fbpA"
                     /locus_tag="WHR07_000393"
     CDS             complement(10346..11341)
                     /gene="fbpA"
                     /locus_tag="WHR07_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter substrate-binding protein
                     FbpA"
                     /protein_id="HEZ2129651.1"
                     /translation="MKTSIRYALLAAALTAATPALADITVYNGQHKEAAQAVADAFTR
                     ATGIKVKLNSAKGDQLAGQIKEEGSRSPADVFYSEQIPALATLSAANLLEPLPASTIN
                     ETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKDLEKSVLNYATPKWKNRIGYAPT
                     SGAFLEQVVAIVKLKGEAAALKWLKGLKEYGKPYAKNSVALQAVENGEIDAALINNYY
                     WHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGAAVLKSSQNKDEAKKFVAFLASKEG
                     QRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVSEKEHATRLLEQAGMK"
     gene            complement(11592..12062)
                     /locus_tag="WHR07_000394"
     CDS             complement(11592..12062)
                     /locus_tag="WHR07_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4375 domain-containing protein"
                     /protein_id="HEZ2129652.1"
                     /translation="MTDTDTQADRFEQMMWQAVDKLFERHDGKLESMDGWEQELVLIW
                     RAEADIGNGGILQFVCNWGFPAAEKTCSVLKKIGAVHSAMLIHRAADALRKEIRHLQS
                     EGKNLKEMWDITKHLDNKTASLPNSLDEQYWQDPDKLYLPGWQYYSGNPVQTLF"
     gene            complement(12120..13496)
                     /gene="argH"
                     /locus_tag="WHR07_000395"
     CDS             complement(12120..13496)
                     /gene="argH"
                     /locus_tag="WHR07_000395"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEZ2129653.1"
                     /translation="MHDKTWSGRFNEPVSELVKQYTASIGFDRRLAEWDIQGSLAHAQ
                     MLKETGVLDEGDLADIRRGMAEILEEIRSGKIEWSSDLEDVHMNIERRLTDKIGDAGK
                     RLHTGRSRNDQVATDIRLWLRDQITVIRSLIQSLQTALLDLAEQNAETVMPGFTHLQV
                     AQPVSFGHHMLAYVEMLGRDNERMADCRCRVNRMPLGAAALAGTTYPIQREITAELLG
                     FEQICQNSLDAVSDRDFAIEFTAAASLVMVHLSRLSEELILWMSPRFGFIDIADRFCT
                     GSSIMPQKKNPDVPELVRGKSGRVIGHLIGLITLMKSQPLAYNKDNQEDKEPLFDTAD
                     TLIDTLRIYADMMRGVTVKPDNMRAAVMQGFATATDLADYLVKKGMPFRDAHEVVAQA
                     VRHADEAGVDLSELPLEVLQGFSDLIADDVYGVLTPEGSLNARNHLGGTAPEQVRFQV
                     KRWREMLA"
     gene            complement(13515..14384)
                     /gene="galU"
                     /locus_tag="WHR07_000396"
     CDS             complement(13515..14384)
                     /gene="galU"
                     /locus_tag="WHR07_000396"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HEZ2129654.1"
                     /translation="MKPIRKAVFPVAGMGTRFLPATKASPKEMLPIVDKPLIQYAVEE
                     AVEAGCTEMVFVTGRNKRSIEDHFDKAYELETELEMRHKDKLLEHVRNILPPNITCLY
                     IRQAEALGLGHAVLCARAAIGDEPFAVILADDLIDAPKGALKQMVEVYGRSGNSILGV
                     ETVEASQTGSYGIVETEQLKQFQRIIGIVEKPKPEDAPSNLAVVGRYILTPRIFDLLT
                     GLPRGAGNEIQLTDGIAKLLDHEFVLAHPFEGTRYDCGSKLGYLEATVAYGLKHPETG
                     EPFRRLLEKYRTE"
     gene            complement(14412..15011)
                     /gene="rdgB"
                     /locus_tag="WHR07_000397"
     CDS             complement(14412..15011)
                     /gene="rdgB"
                     /locus_tag="WHR07_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HEZ2129655.1"
                     /translation="MSEKPEKIVLASGNAGKLKEFGNLFEPYGITVLPQSEFSIPECP
                     EPYSTFVENALAKARHAAGHSGLPALADDSGICAAALNGAPGIHSARYAGSNPKSDTA
                     NNLKLAAELAGKADKSCCYVCVLVFVRHKDDPRPIIAEGVWHGQWNGVPAGENGFGYD
                     PYFYLPGHGKTAAELDSEVKNRESHRAQALAELLRKLAL"
     gene            complement(15004..15237)
                     /locus_tag="WHR07_000398"
     CDS             complement(15004..15237)
                     /locus_tag="WHR07_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129656.1"
                     /translation="MNRRKIYLLSVALFTLAFMLLVLLGAYLLTVGSKAFAVASFLFA
                     FGALFGQIGSLALYLRHKSLRAAQSAAKENRYV"
     gene            complement(15345..15878)
                     /locus_tag="WHR07_000399"
     CDS             complement(15345..15878)
                     /locus_tag="WHR07_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HEZ2129657.1"
                     /translation="MADFNQILTPGDVDGGIINVVNEIPAGSNHKIEWNRKLAAFQLD
                     RVEPAIFAKPTNYGFIPQTLDEDGDELDVLLVTEQPLATGVFLEARVIGVMKFVDDGE
                     VDDKIVCVPADDRNNGNAYKTLSDLPQQLIKQIEFHFNHYKDLKKAGTTKVESWGDAE
                     EAKKVIKESIERWNKQA"
     gene            complement(15979..16437)
                     /gene="nudB"
                     /locus_tag="WHR07_000400"
     CDS             complement(15979..16437)
                     /gene="nudB"
                     /locus_tag="WHR07_000400"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HEZ2129658.1"
                     /translation="MPMAKPLKYPVSALVVLYSGDGGILLIERTHPEGFWQSVTGSLE
                     PGETVAQTARREVWEETGILLADGQLQDWHDSTVYEIYHHWRHRYPKGVFENREHLFS
                     AEIPRDTPIALQPEEHVSYGWFDMEEAAEKVFSPSNRRAILELGRFLGKR"
     gene            16648..16724
                     /locus_tag="WHR07_000401"
     tRNA            16648..16724
                     /locus_tag="WHR07_000401"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:16682..16684,aa:Pro,seq:ggg)
     gene            16882..18708
                     /gene="mafB"
                     /locus_tag="WHR07_000402"
     CDS             16882..18708
                     /gene="mafB"
                     /locus_tag="WHR07_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 2"
                     /protein_id="HEZ2129659.1"
                     /translation="MGISRKISLILSILAVCLPMHAHASDLANDSFIRQVLDRQHFEP
                     DGKYHLFGSRGELAERSGHIGLGNIQSHQLGNLMIQQAAIKGNIGYIVRFSDHGHEVH
                     SPFDNHASHSDSDEAGSPVDGFSLYRIHWDGYEHHPADGYDGPQGGGYPAPKGARDIY
                     SYDIKGVAQNIRLNLTDNRSTGQRLADRFHNAGSMLTQGVGDGFKRATRYSPELDRSG
                     NAAEAFNGTADIVKNIIGAAGEIVGAGDAVQGISEGSNIAVMHGLGLLSTENKMARIN
                     DLADMAQLKDYAAAAIRDWAVQNPNAAQGIEAVSNIFMAAIPIKGIGAVRGKYGLGGI
                     TAHPIKRSQMGAIALPKGKSAVSDNFADAAYAKYPSPYHSRNIRSNLEQRYGKENITS
                     STVPPSNGKNVKLADQRHPKTGVPFDGKGFPNFEKHVKYDTKLDIQELSGGGIPKAKP
                     VFDAKPRWEVDRKLNKLTTREQVEKNVQEIRNGNKNSNFSQHAQLEREINKLKSADEI
                     NFADGMGKFTDSMNDKAFSRLVKSVKENGFTNPVVEYVEINGKAYIVRGNNRVFAAEY
                     LGRIHELKFKKVDFPVPNTSWKNPTDVLNESGNVKRPRYRSK"
     gene            18711..19175
                     /locus_tag="WHR07_000403"
     CDS             18711..19175
                     /locus_tag="WHR07_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129660.1"
                     /translation="MAIWNYRYYLIPSAAIRNKFNANKDIILDEYRSNGFQNFNENKS
                     FENYFIDNDVILLSIINEAKKQLKLKESWDKDAIMFCDNFGNSLTVWPDDIECELDLR
                     FDYTKFIQKTIDWAIKYNCLLVIEKTGNVVSPNINNLMYEIKAYLESKPWPI"
     gene            19364..19546
                     /locus_tag="WHR07_000404"
                     /pseudo
     CDS             19364..19546
                     /locus_tag="WHR07_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223961.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease"
     gene            19558..19845
                     /locus_tag="WHR07_000405"
     CDS             19558..19845
                     /locus_tag="WHR07_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="barstar family protein"
                     /protein_id="HEZ2129661.1"
                     /translation="MQLEIIGSKIYTEQDFHNQISKIFSIQDYYGNNLDALWDLLSTN
                     VERPITLVWKDAMFSKNQLENIFIEIVNVLERVKKQDEDYGFEEKFNYILE"
     gene            20341..21603
                     /locus_tag="WHR07_000406"
     CDS             20341..21603
                     /locus_tag="WHR07_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EndoU domain-containing protein"
                     /protein_id="HEZ2129662.1"
                     /translation="MKSKSGVIASLTGAAVGGTPVDAQTGGAVGQNAVENNLYLTSEA
                     LKKDKQTARKIYSVIKEQVKHECSSTGRITECRQNIGRIIEFTQDKRFDSRFKDLKKE
                     SLYYLNKHPDLVASYLKAEYEKLDREDKSILHRYISPGAEIVSGSLGVVLSGVAGGGS
                     CAETFGLGCAAALVGVTSSYDHVITGTKNFGKKASEQRPTIAVQALKQLGLSEQAAEY
                     VQFSIDLFSVGKSGGGIPKAKPVFDAKPRWEVDRKLNKLTTREQVEKNVQETRRRSQS
                     SQFKAHAQREWENKTGLDFNHFIGGDINKKGTVTGGHSLTRGDVRVIQQTSAPDKHGV
                     YQATVEIKKPDGSWEVKTKKGGKVMTKHTMFPKDWDEARIRAEVTSAWEKRKELEGQK
                     WRGTSKSGVEIEGFTEPNRTAYPLYNSK"
BASE COUNT         5074 a         5026 c         6274 g         5377 t
ORIGIN      
        1 cagataccga acaccaaaca tcaaatatat atatcaggat aaccaaggga cggcagaagc
       61 taggaatacc ggaataaaaa attcaaacgg aaaatatata gtctttattg attcagatga
      121 ttttattaat tgtcaggtct tgctggattt tcttagtaaa gatgatattg atatgccgga
      181 tgtggttttt ttaaatgcgg ttaaatatga taagggaagt gtttcacatt ttggcgaaga
      241 ttatcagcct gaaaaaatac tcaatcaatc caaagtcgaa gttttgaaag gattatgccg
      301 atttagaaaa tttccgggtt cggcgtgtaa taagattata aaaagggaat tgattatcaa
      361 agaaaaactg ttttttgaaa aagaggttta tgccgaagat atcgaatggt caatgagatt
      421 atttaatgcg gcaacaactt tttcttattt ggacggttgt tattactatt atcggcaggg
      481 aagaaaagat tctaaaacag gaactgtttc ggaaaaaagt ataaagtcat tattatatat
      541 tttggagaaa aatgcggaaa tggaatttaa tagggatata tcaagttatc tttattcttt
      601 tctttcctac gaatatctcg ttttgctttt tatcatgacg agtaaaaata tagagtgtga
      661 tgctgatata aaaagaaggg cgtatcattt aaggtttatg ctgttaaagt ccaataaatt
      721 gatatataag ctgatattcc cgataatcac attattcggg gttgatatta caggcaggat
      781 tttaaaagca atcaggggga atatttaata aatcctttaa cactatacat cttaccgaag
      841 gaggaaaaat gaacgcaatc cgaactttcc aaaaccgcac gcccgaaatc cacgaaagct
      901 gtatgataga cgaagcgtgc gtcgtcatcg gcgaagtgtc gcttgccgaa gacgtttccg
      961 tgtggccgtg cgccgtgttg cgcggcgatg tgaacagcat caccgtcggc gcgcgcagca
     1021 atatacagga cggcagcgtc ctgcacgttt cccacaaaac cgccgccaaa cccgaagggt
     1081 cgccgctggt tatcggcgaa gacgttaccg tggggcacaa agtgatgctg cacggctgcc
     1141 gtatcggcaa ccgcgtcctg gtcggcatgg ggacgacggt tctggacgat gccgtgattg
     1201 aggacgaagt gatgatcggc gcgggcagcc tcgtgcctcc gcgcaaacgt ttggcgggcg
     1261 gctaccttta tgtcggttcg ccggtcagac aagtgcgcgt gctgaccgat gaggaaaaag
     1321 cctttttgaa atattccgcc gcgcattatg tgaagctgtc gaaacagtac gggatgtgaa
     1381 atcacatcgg cgttcttgcg tcagccccaa attcatgcgg atgggacgca tccgataacg
     1441 gtatccgatg cgccttgatt ttgaccgtct gcgtttgagt tgcaggcaaa aatgccgtct
     1501 gaagcccttt tttcgggttc agacggcatt ttattgccga ttgcttttta aagtttgacc
     1561 gaatgctcgc gcgtttcgtg gaacacgatg tccggccagc gttcttgcgt gagtcccaga
     1621 ttcacgcggt taggggcgag gtaggcgagg ttgccgcccg cgtcgatggc gaggttgcct
     1681 gcattggctt tttcaaattc cgccagtttt ttcttgtcgt cgcacgatac ccagcgcgcc
     1741 gaccagatgg atgcgctgtc gaacacggct tctacgccgt attcgttggc cagccgcgag
     1801 gtaacgactt caaattgcaa cacgccgacc gcgcccaaaa tcaaatccgc gccgctcatc
     1861 ggtttgaaca cctgcaccgc accttcttcg ccaagctgtt gcaaaccttt ttgcagttgc
     1921 ttgattttca gcgggttttt gatgcgaacg ctgcggaaca gttcgggcgc gaagaaggga
     1981 atgcctgtaa atgccagttg ttcgccttcg gagaagctgt cgccgatttg gatgttgccg
     2041 tggttcggga tgccgatgat gtcgccggcg taggcttctt ccaccagctc gcggtcgtgc
     2101 gacatgaagg ttaccacgct ggaggcggcg atttcgcggt tgatgcgcag gtgtttcatc
     2161 ttcatgccgc gctcgaattt gccggagcag acgcgcaaaa aagcgatgcg gtcgcggtgt
     2221 ttcggatcca tattggcttg gattttaaag ataaatccgg aaaacttagc ctcgtccggt
     2281 tcgaccatac gcacggtcgc gtcgcgcggt ttcggcgcgg gcgcccagtc aatcaatgaa
     2341 ttgaggattt cctgaatacc gaagttgtta atcgccgaac cgaaaaacac gggcgtgagt
     2401 tcgccggcga gaaattcgtc gagattaaac tcgttcgatg ctgcctgcac taattcgatt
     2461 tcgtcgcgca actgttggat ttccaacgga aagcgttgtt ccaattcagg attatcgata
     2521 cctttgatga tgtcgaattc gtgcggcaga cgttcgccgc cggcttcaaa gagatagatt
     2581 tcatcgttca ggatgtggta tacgcctttg aagtttttgc ccataccaat cggccaggta
     2641 acgggcgcgc agcggatttg caggatgttt tccacttcgt ccaagagttc cagcgagtcg
     2701 cgcacttcgc ggtcgtattt gttcataaac gtaacaatcg gcgtatcgcg caggcggcag
     2761 acgtttaaga gcttgatggt ttgcgcttcc acaccttttg ccgcgtcaat caccattaat
     2821 gcgctgtcca cggcggttaa aacgcggtag gtgtcttcgg agaagtcttg gtgtcccggc
     2881 gtgtccaaga ggttgacggt gtggtcttta tagtcgaact gcatcacgct tgatgccacg
     2941 gaaatgccgc gctgcttctc gatgtccatc cagtcggagg tggcgaattt gccggttttc
     3001 ttgcctttta ccgtacccgc gctttgaatc gcacctgaaa acagcaagag tttttcagtc
     3061 aacgtggttt tacctgcgtc agggtgggag atgatggcaa acgtgcggcg gcggcgcact
     3121 tggtcgagga tttcttggga catggttttc tttgcaaaaa ggttcaggcc gcttttcaga
     3181 cggcccggac agtgtttgag acggcgaaat tgtacaaaaa aatgcctgat aattcaatgt
     3241 tggaggcggt cagtgcgtgc tgccgtaaat ctctttttcg tctttcagga cggcatcggc
     3301 ggtttcccac gcgctgccac gccagacttt gtaaaagcag ctttctcgcc cggtgtggca
     3361 ggcgatgccg ccgttttggg cgatgagcat cacaatggcg tcgccgtcgc agtcgaggcg
     3421 cagttcgcgg actttttgcg tgtgtcccga ctcttcgccc ttcatccatt gtttttggcg
     3481 cgaacggctg taatagtggg caaagccggt ttcgacggtt ttttgcaggg cttcggcgtt
     3541 catccacgcc accattaaaa cacgtttggt ttcggcatct tgggcgatgg cgcaaaccaa
     3601 acctttttcg tcaaatttga cggcttcaag caggttttta tccatatttc ctttcagacg
     3661 gcatagtcgg agcggtcaga ggcgcacttc gatgccggct tcgcgcatag cgcgtttggc
     3721 ttcgcggatg gcgatttccc cgaaatggaa aatgccggcg gcaagtacgg catcggcttt
     3781 gccttcggtt ataccttcaa tcaggtgccg gacattgccg acccctccgg aggcgatgac
     3841 ggggatgtcg acggcttcgg caacggcgcg ggtcagcggc aggttgaaac cctgtttcgt
     3901 accgtccctg tccataccgg taagcaggat ttcgcccgcg ccgcgttttt gcatttcgat
     3961 cgcccattcc accgcatcca aaccggtcgg attgcgcccg ccgtgggtaa agatttccca
     4021 gcgtgtgttt tcggagttga cggctttggc atcgacggcg gcgacgatgg cttgcgaacc
     4081 gaaaaatccg gcggcttcgt caatcaggtc gggacgggta acggcggcgg tgttgatgct
     4141 gactttgtcc gcgccggcat tgagcaggcg gcggatgtcg gcaacggtgc gtacgccgcc
     4201 gccgacggtc agcgggatga agacttgtcc ggcaacttct tcgatgatgt gcaggatggt
     4261 gtcgcggttg tcggatgagg cggtgatgtc gaggaaggtc aattcgtccg cgccttcgcc
     4321 gttgtagcgt ttggcggctt cgacggggtc gcccgcgtcg cgcaaaccga tgaagttcac
     4381 gcctttgacg acgcgcccgt cttttacgtc gagacagggg atgatgcgtt ttgccagtgc
     4441 cataatcgga tgcctttagt cgagggaatc tgccagttgc tgcgcttggg caaaatcgat
     4501 gctgccctcg taaatcgcgc ggccggtaat cgcgcctgct acgccatgtt tttcggcggc
     4561 acacagggcg cggatgtcgt ccaagccggt cagtccgccg gaggcgatga cgggaatgcg
     4621 gacggcttgg gcgagtttga ccgtcgcgtc gatgttcacg ccgctcatca taccgtcgcg
     4681 cccgatgtcg gtgtagatga tgctgttgac gccgtcgtct tcaaagcgtt ttgccaaatc
     4741 aattacatga tgcccggtta cggttgccca gccgtcgatg gcggccatac cgtctttggc
     4801 atccagcccg acaataatcc tgccggggaa ggctttgcac gcctcgcgca cgaagtcggg
     4861 gtttttgacc gccgccgtgc cgataatcac gtcgtttaag cccaaatcca aatattgtcc
     4921 gatggttttc aaatcgcgta tgccgccgcc gagctgtacg gggatgtctt tggcgacggc
     4981 ggcaaggatg tctttgatgg cgggcaggtt ttgcggaacg ccggcaaacg cgccgttcaa
     5041 atctaccaga tgcaggcggc gcgcgccttg ttcgaaccag tgcagcgcgg tttcggcggg
     5101 cgaatcggaa aagacggtcg cctcttccat cagcccttgt ctcaggcgga cgcagcgtcc
     5161 ttctttcaaa tcgatggcgg gtatcagcag catagttttt ctccttgtgc ggggccgtgt
     5221 ccggcttacc agtttaaaaa gtttttcaac atcgtcagcc cggcatcgtg gcttttttcg
     5281 gtgtgaaatt gcgtggcgaa tacgttgtct ttgccgacga tgcaggcaaa cggggacggg
     5341 tagtcgcttt cgcccaatat ggtttcggga ttttcggggg cgaaatagta gctgtggacg
     5401 aagtaaaaac gcgtgtcttg ggggatgcct tgaaaaagcg ggtggttttg ggtttggcgc
     5461 acggtgttcc agcccatatg cgggactttc agacggcatc cctgcgggtc gcggaggtcg
     5521 cgctcaaagc gtctgacttt gccgccgaac cagcccaagc cgtcggtgtt tccttcttcg
     5581 ctgtggtcga ataaaagttg cgcgccgacg cagattccga aaaagggttt gttttttaag
     5641 gcatctttga ctgcctcgtc caagccgccg cgcgtcagtg ccgcaataca gtcgggcatc
     5701 gcgccctgac cgggaaaaat gactttgtcg gcgcgggaca cgcggtcggg gtcgccgctt
     5761 aaaaagattt cggtattttt tccggcaagc tgccccgccg tccagacgga tttcaatacg
     5821 gaatgcaggt tgcccatacc gtaatcgata atggcgattt gcatggcttc ctcctctttt
     5881 tttgcaatat ggctgcgatt ttaacaaaca aatgtgccgt gctgataaaa atgccgtctg
     5941 aaaacgggag tctgtcttca gacggcatag ggtttaaacc cggaaagccg tttgtcagcc
     6001 ttccatttgt tttgcctgaa cggcagttag ggcgatggtg aacacgatgt cttccaccag
     6061 cgcgccgcgc gacaggtcgt tgaccggttt gcgcaggcct tgcagcagcg ggccgacgct
     6121 taagacgttg gcactgcgtt ggacggcttt ataggtgcag ttgccggtgt tcaggtcggg
     6181 gaagaccaaa acggttgcct gtcctgccac cgggctgccc ggagctttgg atttgcccac
     6241 gcccggcacg gttgccgcat catattgcag cgggccgtcg atggcgaggt cggggcgttt
     6301 ttcccgggca agtttggttg cttcgatgac ggtatcgaca tcggggccgc tgccggagtt
     6361 gacggtggag taggaaatca tcgccacttt cgggtcgatg ccgaaggctt ttgcggaatc
     6421 ggcagactgg atggcgatgt cggcaagctg ttgcgcggtc gggttcggat taaccgcgca
     6481 gtcgccgaag acgaggactt ggttgggcag cagcataaag aatacgctgg acacgaggct
     6541 tgcgcccggt gcggttttaa tcagttgcaa agcggggcgg atggtgttgg cggtggtgtg
     6601 aaccgcaccg gataccaaac cgtccacatc attttgcgcc atcatcatcg taccgagtac
     6661 cacggtgtct tgcagttgct tgcgcgcgtc ttcgggtgtc aggcctttgg atttgcgcag
     6721 ttcgcacatc ggtccgacgt attgttcgac caatgaggcg ggatcgatga tttccaaaga
     6781 gtcgggcagg ctgatgccgc gttctttggc aacggcttcg acttcttcgc gtttggcaag
     6841 caggacgcag cgggcaatgc ctttttcgtg gcagatggcg gcggcttgga cggtgcgggg
     6901 ttctgcgccc tcaggcagaa cgatgcgttt gtcggcttgg cgggcgaagt cgatcaggtt
     6961 gtagcggaat tgcgccggcg acaggcgttt tgcttcgcgg cctgccaata cggatacgtc
     7021 tttcagcgcg tcgctcgaac cgaagaaggt caggccggtt ttttcggctg ccgcttcggc
     7081 aacggaggct gccgcgccgt ccacgacaaa accttccaat acgcccggcg cggcggcgaa
     7141 gaactgtttg gcaaggttca gccgatttgc cagttcgtcg gcatcggcgt tgtcggaacg
     7201 gacggcgaag acggctgccg cgtcaaggga caatgccagt tcgacgtttt tgcctgcgag
     7261 gtagattttg tcggcatcgg gcgcgatgcc ttcgatgacg aggttggcgg catcgagtgc
     7321 ggcaactttg ccgaccagtg cgtcgaacca gtcgtcgctt ttgccttgcg cgagcagggt
     7381 ttcggcggtt gcgtcaacgg cttggaaaat ttgtgcgtcc agtgcttttg caaaggcttg
     7441 tgcggcggcg gaggcgtcca gtccggcaga tacgggtacg atgagtactt ttgccatgat
     7501 atatcctttc gtatgctgcg gtgtgcggca tatgtggttg gaaggggcgg catataggca
     7561 gaaacggctg cctgcgtgcc gtgcgtgccg tgtttggctt gaggcgcgca ggttgaatat
     7621 agcaaacaaa ttctgtttcc aacaagataa atatccgcag gcttgtggat gctgccgcct
     7681 ttcagagggt atttccgggg aagaacaggg cgggaccgtc caaatggagg acggcggaaa
     7741 tgccgtctga cagggtgggg gcggaaggga ggttgagcgt gaggacggtt tgtccgaccc
     7801 ggaggctgat ttcggtatgc cgcgctttgg gcgtggtttt gagaaccacg gcgtgaatgg
     7861 aggcggtggg tgcggaatgg gggtgaaggc tgaactgttc cggacggatg agcagtgtgc
     7921 cgcgtgtgcc tgcgggtgcg ccgctttgaa cgggcaggcg gcccaatccg caatcggcgg
     7981 tgccgtcggc gttgagcgcg gcggggaaca cgatgccttc gccgataaac agggcggcat
     8041 caaggtcggc aggttgtcgg tacaattcgt gagggcttgc agtttggagg atgcgcccct
     8101 gtttcatcac ggcaatccgg tcggcgtatt gcagggcttc ttcgcggtcg tggctgacga
     8161 aaacggcaga tttgccgttg gcgcgcaggg cggcaatcat gtcttcgcga atctggcggc
     8221 gcaactgttc gtccagcgcg ctgaagggtt cgtccaacaa aatcagttcg ggatcgggtg
     8281 cgagggcgcg ggcgagggcg acgcgctgtt gctgtccgcc cgaaagttcg tgcggatagc
     8341 gtccggcaag ttcggaaatg ccggtcaatt ccaacatagc ttcgatgcgc tgccgctctt
     8401 gcgccgtctt gcctttgccg ttgcccagcc cgtaggcggt gttgcggtaa acggtcaggt
     8461 gggggaacag cacaccttcc tgtacgacat aacccaaacg gcgttcgcgg acggggaggt
     8521 tggtattttt cgagaagatg gttctgccgg aaagcgaaat ttcgccaaaa tcgggttgtt
     8581 caaaaccggc aaggcagcgt aaaagggtgg ttttgccgca gccggacgcg ccgacgataa
     8641 agaggatttc gcccgggtcg aggctgagcg aaatgtcgtt taaaactggg gtgttttgaa
     8701 aacttttgga caggtgtccg atgtgcaggg cggcggtcat ggcggtactt cctcaagctg
     8761 ttatttgaag gcgtatttct tcagcaggaa tacggggatg ccggaaaata ataccagcat
     8821 cagcgcgtaa ggggtggcgg cggcgtattg tgcgtccgat gtgtattccc aaacggcggt
     8881 ggagagtgtg tggacatcgt cggtggtcag cagcagggtg gcggtcagct ctttcatcag
     8941 tttgaggaag acgagtgcga atgcggcggt aatgccgggc aggatggacg gcagtaccaa
     9001 cgtcctgaaa ataaagaagt gtccgcgccc caatgttgcg ccgacctgtt ccatcccttt
     9061 tgggagttgt tccaaggaag tcctcagggt ggtttgcgcc atcggcaggt aaagcatgaa
     9121 ataggcaagg atgacgacga taaaggtttg gtaaacggca ggggtgtagt tgatgctgaa
     9181 ataaaccaag gatagggcga taaccaaacc ggggacggcg tgcagtaaaa acggcagcct
     9241 gtctatccaa acggttaaaa aattgcgata gcgaaccgat gcccaaacaa ggggcaaggc
     9301 acataatata gtcaaaatcg cacctaaagc cgatacgctt aaggaacgga taaaggcatc
     9361 aaatacggat acgagcgcga atgtgccgga agtgccgacc atcatccaat gtatcaatac
     9421 gccaaagggg ataataatgc ccaaagtcaa caagctgctt aaaaaaacaa tcgcgccgat
     9481 ctgaccgggc agtttgaggg ttttgacggg ataaggacgg gcaacgcctt tgccgctgtg
     9541 gtaaatcttg gctttgccgc gaaatatgct ttctccaaat acgacgatgc cgcacaccgc
     9601 cattaaaaca gcggaaagca gggcggcggt attgttgttg taggacattt cgtattcttg
     9661 gaaaatggcg gtggtaaaag tggggtagtt caaaatagat accgcgccaa attcgaccag
     9721 catatgcagg gcaatcagta acacgctgct gccgatggcg ggtttgagct gggggaggat
     9781 ggcggaaaaa aaggtttgca ggcggctttt gcccaaggac aggctgactt cttcgtaaga
     9841 caggctgatg cgtttgagtg ccgcctcgac gggcaggtag gcgagcggga acgaggacag
     9901 gctcataatc atcactgtcc cccaaaagcc ttcgacacgg aaggtcaggc tgatccaggt
     9961 gaaacagctg acaaatgcgg ggatgcacaa aggcagggtg attgccgtct gaaaaaaggt
    10021 tttgccgaag aagcggtaac gttggaacaa aagggcgcag gcaatgccca aaacaatgga
    10081 aatcagggta acgcccgcca tcatcgtcaa ggtgttggag agcaaatccc acatacgcgg
    10141 gcggaacaac agttcgacgg cgaggttgat gccgacctgc cacgaacgca tagcgacata
    10201 taaaaaaggc agggtaagcg gtagggcaat cagtaggatg aggccggtaa gccaaatggg
    10261 tattttttta ggagacatag tgttttttat cggcaaaacg ggcggacagt ataaatgtcc
    10321 acccgtttga caatccgaaa acggcttatt tcataccggc ttgctcaagc agccgggtgg
    10381 cgtgttcttt ttcggaaaca gtggtggcgg acacttgggg tgcttccaac ttggcgatgg
    10441 gttccaaatt gaaagtggat accacgtgcg gattcaaagg atattcggca cggacggcgg
    10501 tcagggcgcg ctgtccttcc ttgctggcga ggaaggcgac gaattttttc gcctcatcct
    10561 tgttttggga ggattttaac acggctgcgc cggaataggt aacgagtgcg ccgggatctc
    10621 tgtggcggac gaaattcagg cgggtgtgga cattttgtac gcctttttca cgcgcaaaag
    10681 cgtgccagta gtagttgttg atgagggcgg catcgatttc gccgttttca accgcttgaa
    10741 gggcgacgga gtttttagcg taaggcttgc cgtattcttt cagacctttg agccatttca
    10801 atgcggccgc ttcgcctttc agtttgacga tggcgacaac ctgttccaag aacgcgccgg
    10861 aagtgggggc gtaaccgatg cggtttttcc atttcggcgt ggcgtaattc aggacggatt
    10921 tttccaaatc tttttcagac agtttgcggg tgtcgtaaac gacgacgcgc gaacgtccgc
    10981 tcagtgccac ccagtctttt ttggcggcaa ccggcacgcc cttgccgcgt gtttcgttga
    11041 tggtggaggc gggcaggggc tctaggaggt tggctgcgga aagggtggcg agtgccggga
    11101 tttgttcgga atagaatacg tcggcggggc ttcggctgcc ttcttctttg atttgaccgg
    11161 caagctggtc gcctttggcg ctgttgagtt tgactttgat gccggtagcc cgggtaaagg
    11221 catctgcaac ggcttgtgcc gcttctttgt gttggccgtt gtacacggta atgtctgcca
    11281 gcgcgggggt tgcggcggtc agggctgcgg caagcagtgc gtatcggata gatgttttca
    11341 tatcgatttt ctcctaatga atgagagtgt acaccttgtt aaaacataac ggtgtgtagt
    11401 gtattccttc ttctttataa atgcaaataa ttatttttta aatttgttat tatccgatcc
    11461 ggttattgtt tgttctgact tgtatttttt ccgtgcatcg cgcccgtaag gcggaagcgg
    11521 cgggcaatgc gtggcggaat gtgggtaaag gcggcatttt gatttgtcgg aatgcttgag
    11581 aacccctctc tttaaaacag cgtctgaaca gggttgccgg aatagtattg ccatcccggc
    11641 agatacagtt tgtcggggtc ttgccaatat tgttcatcca gactgttcgg cagtgaggcg
    11701 gttttgttgt cgagatgttt tgttatatcc cacatttctt tcaggttttt accttccgat
    11761 tggaggtggc ggatttcttt tctcaatgcg tctgccgccc gatggatcag cattgcgctg
    11821 tgtaccgcgc cgattttttt cagaacggaa caagtctttt cggcggcggg gaaaccccag
    11881 ttgcagacaa attgcagtat gccgccgttg ccgatatcgg cttctgcccg ccaaattaaa
    11941 accagctcct gttcccaccc gtccatgctt tcgagtttgc cgtcatgccg ttcaaaaagt
    12001 ttgtccaccg cctgccacat catctgctcg aagcggtcgg cttgggtatc cgtatcggtc
    12061 atcgtgttct tgccttttaa aaatgccgtc tgaacatttc ttcagacggc atttgggggt
    12121 taagccaaca tttcccgcca gcgtttgact tggaaacgga cttgttcagg cgcggtgccg
    12181 cccaagtggt tgcgcgcgtt taagctgcct tcgggtgtca gcacgccgta aacgtcgtcg
    12241 gcaatcaaat cgctgaaacc ttgtaagact tcgagcggca gttcgctcaa atcgacgccg
    12301 gcttcatcag catggcgcac ggcttgggcg acgacttcgt gggcatcgcg gaaaggcatg
    12361 ccttttttga ccagataatc cgccaagtcg gtggcggtag cgaagccctg catcacggcg
    12421 gcgcgcatat tgtcgggttt gacggttacg ccgcgcatca tatcggcgta aatccgcaac
    12481 gtgtcgataa gcgtgtcggc ggtgtcgaac aagggttctt tgtcttcctg attgtctttg
    12541 ttgtacgcca agggttggga tttcatcagg gtaatcagac cgataaggtg tccgatgacg
    12601 cggccggatt tgccgcgcac gagttcgggc acgtcggggt ttttcttctg cggcatgatg
    12661 gacgaacctg tgcagaagcg gtcggcgatg tcgataaagc cgaaacgcgg gctcatccac
    12721 aaaatcaatt cttcagacag gcggctcagg tgaaccataa ccagcgaggc ggcggctgtg
    12781 aactcaatgg cgaaatcgcg gtcggatacg gcatcgagcg agttctggca gatttgttca
    12841 aagcccaata gctcggcggt gatttcgcgc tgaatcgggt aggtcgtccc ggcaagggcg
    12901 gctgcgccga gcggcatacg gttgacgcgg cagcggcagt ccgccatccg ttcgttatcg
    12961 cgtccgagca tttcgacgta ggcgagcata tggtgtccga agctgacggg ctgggcgact
    13021 tgcagatggg taaaaccggg catgacggtt tcggcgtttt gttccgccaa atccagcaat
    13081 gccgtctgaa ggctttgaat caggcttcgg atgacggtaa tctggtcgcg cagccaaagg
    13141 cggatgtcgg tggcgacttg gtcgttgcgg ctgcggccgg tgtgcaggcg tttgcccgcg
    13201 tcgccgattt tgtcggtcag gcggcgttcg atgttcatgt ggacatcttc caaatcggac
    13261 gaccattcga ttttgccgct gcggatttct tcgaggattt ccgccatgcc ccgacggatg
    13321 tctgccaaat cgccttcgtc caacacgccg gtttctttca acatttgcgc gtgtgccagc
    13381 gagccttgaa tgtcccattc ggcaagccgt cggtcgaaac cgatggaggc ggtgtattgt
    13441 ttgacgagtt cggaaacggg ttcgttgaaa cgtccggacc aggttttgtc gtgcataagg
    13501 attccttgat ggggttattc ggtgcggtat ttttccaaaa ggcggcggaa gggttcgccg
    13561 gtttcggggt gtttcaggcc gtaggcgacg gtggcttcga ggtagcccag tttgctgccg
    13621 cagtcgtagc gcgtgccttc aaaggggtgc gccaggacaa attcgtgatc gagcagcttg
    13681 gcgatgccgt ctgtaagctg gatttcgttg cccgcgccgc gcggcagtcc ggtcagtaag
    13741 tcgaaaatgc gcggggtaag gatgtagcgt ccgacgacgg caaggttgga gggcgcgtct
    13801 tcgggcttgg gtttttcgac aatgccgata atgcgttgga actgtttgag ctgttcggtt
    13861 tcgacgatgc cgtatgagcc ggtttgcgat gcttcaacgg tttctacgcc caaaatgctg
    13921 ttgccgctgc gcccgtacac ttcgaccatt tgtttgagcg cgcctttggg ggcatcaatc
    13981 aggtcgtcgg caaggataac ggcaaagggt tcgtctccga tggcggcgcg ggcgcacaag
    14041 acggcgtgtc ccaagcccag tgcttccgcc tgacggatgt agaggcaggt aatgttcggc
    14101 ggcaggatgt tgcggacgtg ttccaacaat ttgtctttat ggcgcatttc caactcggtt
    14161 tcgagttcgt atgccttgtc gaaatggtct tcgatgctgc gtttgttgcg tccggtaaca
    14221 aacaccattt ccgtgcagcc ggcttccacg gcttcttcta cggcgtattg gatcagcggc
    14281 ttgtcgacga tgggcagcat ttctttcggg cttgccttgg tggcgggcag gaagcgtgtt
    14341 cccatccctg cgacggggaa aacggctttc cgtatgggtt tcattctttt tcctttgtat
    14401 tgttttgatg tttaaagggc gagtttgcgt aagagttcgg caagtgcctg cgcgcggtgg
    14461 ctttcgcggt ttttgacctc cgaatccaat tcggcggcgg ttttgccgtg tccgggcaga
    14521 taaaaatacg ggtcgtaacc gaaaccgttt tcaccggcgg gaacgccgtt ccattgtccg
    14581 tgccatacgc cttcggcaat aatcggacgc gggtcgtctt tatggcggac aaaaaccaat
    14641 acgcagacgt agcaacagct tttgtcggct ttgccggcaa gttcggcggc aagtttcagg
    14701 ttgttggcgg tatcggattt gggattgctg ccggcgtaac gtgcggaatg tatgcccgga
    14761 gcaccgttta aggcggcggc acagatgccg ctgtcgtcgg cgagtgcggg cagcccgctg
    14821 tgtccggcgg cgtgccgggc ttttgccagc gcattttcaa caaaggtgga atagggttcg
    14881 gggcattcgg gtatgctgaa ctcggattgc ggcaatacgg taatgccgta tggttcgaat
    14941 aggttgccga attctttgag tttgcctgca ttgccgcttg ccaaaacgat tttttccggt
    15001 ttttcagaca tagcggtttt cctttgcggc ggattgggcg gcgcgtaggg atttgtgccg
    15061 caggtagagg gcgaggctgc cgatttgtcc gaacagtgcg ccgaatgcga aaagaaagga
    15121 ggcgacggcg aaggctttgc tgccgacggt cagcagataa gcacccaaga ggacgagcag
    15181 cataaatgcc agtgtgaaga gggcaacaga caacagatag atttttcggc ggttcatggc
    15241 gttcggtcgg aaacggtatg ttcggattat agccgattgg gacggtattc cctagagctt
    15301 ggaaaaatgc cgtctgaaac ggcgttcaga cggcatggcg ggcgttatgc ctgtttgttc
    15361 caacgttcga tggattcttt gatgactttt ttcgcttctt ccgcatcgcc ccacgattcg
    15421 actttggtcg tacctgcttt tttcaggtct ttgtaatggt tgaagtggaa ctcgatttgt
    15481 ttgatgagct gttgcggcaa atcggacaaa gttttgtagg cgttgccgtt gttgcggtcg
    15541 tcggcaggaa cgcagacgat tttgtcgtcc acttcgccgt cgtcaacgaa tttcatcacg
    15601 ccgataacgc gcgcttccaa gaatacgccg gttgccaaag gttgttcggt aacgagcagc
    15661 acgtccaatt cgtcgccgtc ttcgtccaaa gtttggggaa tgaagccgta gttggtcggt
    15721 ttggcgaaga tggcgggttc gacgcggtcg agttggaatg cggccagttt gcggttccat
    15781 tcgattttgt ggttgctgcc ggcggggatt tcgttgacaa cgttgatgat gccgccgtcc
    15841 acgtcgccgg gggtcaggat ttggttgaag tctgccattt ggtttccttt gtttgggaaa
    15901 gtgtgaagtt tgaaagtata gcacaaacgt ccggctgaaa atgcgcccga tgcctctgaa
    15961 agggtgtacg ggcgcgtgtt accgtttgcc caaaaacctg cccagttcca aaatcgcgcg
    16021 cctgttggac ggggaaaata ctttttccgc tgcttcttcc atatcgaacc aaccgtagga
    16081 gacgtgttct tcgggttgca gggcgatggg cgtatcacgc gggatttcgg cagagaagag
    16141 gtgttcgcgg ttttcaaaca cgccttttgg atagcggtgc cgccagtggt ggtagatttc
    16201 gtaaaccgtg ctgtcgtgcc agtcttgaag ctgcccgtcc gccagcagga tgccggtttc
    16261 ttcccaaact tcgcgccttg ccgtttgggc gacggtttcg cccggttcga ggctgccggt
    16321 taccgactgc caaaatcctt ccggatgcgt gcgttcgatg agcaggatgc cgccgtcccc
    16381 gctataaagg acgaccagtg cggaaacggg gtatttgagc ggttttgcca tcggcatctt
    16441 tcggcgggct gcggtaatga aggggcggat tatagcaaac gccgcacgtt atggcgttta
    16501 tccttttccg tatccttttt tctgcacgga tgggacgcgc cggtgtttgc cggtaaattt
    16561 tccgttgtgt caaaaagata agggcggttg tgattttaat gcttgccaaa gcgtcgggcg
    16621 gaaactataa tccgaaactt atcgagtcgg agtgtggcgc agtctggtag cgcacttgca
    16681 tggggtgcaa ggggtcgaag gttcgaatcc tttcactccg accaaaaatt ccgaaagccg
    16741 ctttcaaaag cggctttttt gccgtccgta tgattatgat gtagagtacg cggcgacaga
    16801 cattcaaatg ccgtctgaaa accgttcaga tggcatctct ttatcttagt ttcattccgt
    16861 accatcttaa ggaacatcaa attgggcatt tcccgcaaaa tatcccttat tctgtccata
    16921 ctggcagtgt gcctgccgat gcatgcacac gcctcagatt tggcaaacga ttcttttatc
    16981 cggcaggttc tcgaccgtca gcatttcgaa cccgacggga aataccacct attcggcagc
    17041 aggggggaac ttgccgagcg cagcggccat atcggattgg gaaacataca aagccatcag
    17101 ttgggcaacc tgatgattca acaggcggcc attaaaggaa atatcggcta cattgtccgc
    17161 ttttccgatc acgggcacga agtccattcc cccttcgaca accatgcctc acattccgat
    17221 tctgatgaag ccggtagtcc cgttgacgga ttcagccttt accgcatcca ttgggacgga
    17281 tacgaacacc atcccgctga cggctatgac gggccacagg gcggcggcta tcccgctccc
    17341 aaaggcgcga gggatatata cagctacgac ataaaaggcg ttgcccaaaa tatccgcctc
    17401 aacctgaccg acaaccgcag caccggacaa cggcttgccg accgtttcca caatgccggt
    17461 agtatgctga cgcaaggagt aggcgacgga ttcaaacgcg ccacccgata cagccccgag
    17521 ctggacagat cgggcaatgc cgccgaagcc ttcaacggca ctgcagatat cgttaaaaac
    17581 atcatcggcg cggcaggaga aattgtcggc gcaggcgatg ccgtgcaggg cataagcgaa
    17641 ggctcaaaca ttgctgtcat gcacggcttg ggtctgcttt ccaccgaaaa caagatggcg
    17701 cgcatcaacg atttggcaga tatggcgcaa ctcaaagact atgccgcagc agccatccgc
    17761 gattgggcag tccaaaaccc caatgccgca caaggcatag aagccgtcag caatatcttt
    17821 atggcagcca tccccatcaa agggattgga gctgttcggg gaaaatacgg cttgggcggc
    17881 atcacggcac atcctatcaa gcggtcgcag atgggcgcga tcgcattgcc gaaagggaaa
    17941 tccgccgtca gcgacaattt tgccgatgcg gcatacgcca aatacccgtc cccttaccat
    18001 tcccgaaata tccgttcaaa cttggagcag cgttacggca aagaaaacat cacctcctca
    18061 accgtgccgc cgtcaaacgg caaaaatgtc aaactggcag accaacgcca cccgaagaca
    18121 ggcgtaccgt ttgacggtaa agggtttccg aattttgaga agcacgtgaa atatgatacg
    18181 aagctcgata ttcaagaatt atcggggggc ggtataccta aggctaagcc tgtgtttgat
    18241 gcgaaaccga gatgggaggt tgataggaag cttaataaat tgacaactcg tgagcaggtg
    18301 gagaaaaatg ttcaggaaat aaggaacggt aataaaaaca gtaactttag ccaacatgct
    18361 caactagaga gggaaattaa taaactaaaa tctgccgatg aaattaattt tgcagatgga
    18421 atgggaaaat ttaccgatag catgaatgac aaggctttta gtaggcttgt gaaatcagtt
    18481 aaagagaatg gcttcacaaa tccagttgtg gagtacgttg aaataaatgg aaaagcatat
    18541 atcgtaagag gaaataatag ggtttttgct gcagaatacc ttggcaggat acatgaatta
    18601 aaatttaaaa aagttgactt tcctgttcct aatactagtt ggaaaaatcc tactgatgtc
    18661 ttgaatgaat caggtaatgt taagagacct cgttatagga gtaaataaaa atggcaattt
    18721 ggaattatcg gtactacctt atcccatcag ctgctatcag aaataaattt aatgcaaata
    18781 aagatatcat acttgatgag tatcgatcta atggttttca gaattttaat gagaataaaa
    18841 gttttgaaaa ttactttatc gataatgatg ttatattatt atcaataata aatgaagcaa
    18901 aaaaacagct taaattgaaa gaatcttggg ataaagacgc aatcatgttt tgtgataatt
    18961 ttggtaatag tcttaccgtt tggccagatg atatagagtg cgaacttgat ttaagatttg
    19021 attatactaa atttattcag aaaaccattg attgggcaat aaaatataat tgtctacttg
    19081 taatagaaaa aacaggaaat gtagtttccc ctaatataaa taatctgatg tatgaaataa
    19141 aagcatattt ggaaagcaag ccgtggccca tatgaaacct aaactcaaca agtaggatgt
    19201 gtgcggaacg cacgtatgcg gttctcaagg tttgagctaa gaggccgtct gaaaacagaa
    19261 aaactgtttc agacgacctt tcttttaacc agttgccaca gcaaccggac aaaagcagcc
    19321 tacctccaca tccatatagg caatacaggg gagatatttt gtaaattcta cgaatatttt
    19381 acctgctaaa cagggtagga tatggtatga agcgaacatt ggcttaataa acactatgtc
    19441 aagatcgaat caggctggta ctagattgtt gtattccaat tatggattgc tatatataac
    19501 aactgatcat tatatctctg caacacggtt tgtagcttgg aaataggagt ataacttatg
    19561 caattagaga ttatcggtag taaaatttat acggaacaag attttcataa tcaaatttca
    19621 aaaatatttt ctatacaaga ttattatggg aacaatcttg atgctttatg ggatttatta
    19681 agcacaaatg tagaacgacc gattactttg gtatggaaag atgctatgtt ctcaaaaaat
    19741 caattagaaa atatatttat tgaaatcgta aatgttctag aaagagttaa gaaacaagat
    19801 gaggattatg gattcgaaga aaaatttaat tatattttag agtaagtaaa ccctaattac
    19861 attacgtaca caggcttaaa actccccaga gccaattaag caagccgtaa cccatataaa
    19921 acttaaactc aacaagtagc atgtgtgcgg aacgtacgca tgcggttctt aaagtttgag
    19981 ctaagaggcc gtctaaaaac agaaaaaccg tttcagacgg tctttgttta acgccaccga
    20041 tccagcgggt tacaaagcgc agtcaatgcc gctgcgcctt atgcctccga agcaataggc
    20101 agaacatttg gacacggtga aaacaaaaac gaaaccgccc aagccgtcgg acatttcctt
    20161 ttaggagcag ctattgcccg cgtcaacggt ggtaattttg ctgccggcgg ctcggcagca
    20221 gttgcagctg aaaaggcggc ggaacatctt gcccaacagt ataacgacgg taaaaccgca
    20281 atcgatccgc aaacaggcga gttcaatgcc aacctgctac cggaacatat caaagaggaa
    20341 atcaaatcaa agagcggggt gattgcatcg ctgacgggcg cggccgtggg cggcacgccg
    20401 gtagatgcgc aaaccggagg tgcggtcgga cagaatgcgg tggaaaacaa cctctatctg
    20461 acatcggaag ccttaaagaa ggacaagcag acagctcgta aaatttattc cgtcataaaa
    20521 gagcaagtca agcatgaatg cagttccaca ggaagaatta ccgaatgtcg tcaaaatata
    20581 ggacgcatta tcgaatttac ccaagacaaa cgctttgaca gtaggtttaa ggacttaaaa
    20641 aaagaatcct tatattacct aaataaacat cctgatttag tagcctctta tttgaaggct
    20701 gaatacgaaa agctggatag ggaagacaaa agtatcctgc accgctacat ctcacccggg
    20761 gctgaaatcg tttcgggcag tttgggggtt gttctttcag gagtagccgg aggcggatct
    20821 tgtgccgaga ctttcggctt aggctgtgcc gccgctttgg ttggtgtaac gtcttcctac
    20881 gatcatgtca ttactgggac gaaaaacttc ggaaaaaaag ccagcgagca acgaccgacg
    20941 attgcggttc aggccttgaa gcagttgggg ctgtcggagc aggctgcgga atatgttcag
    21001 ttctctatag atttgttcag tgtgggtaaa tcggggggcg gtatacctaa ggctaagcct
    21061 gtgtttgatg cgaaaccgag atgggaggtt gataggaagc ttaataaatt gacaactcgt
    21121 gagcaggtgg agaaaaatgt tcaggaaacg agaagaagga gtcagagtag tcagtttaaa
    21181 gcccatgcgc aacgagaatg ggaaaataaa acagggttag attttaatca ttttataggt
    21241 ggtgatatca ataagaaagg cacagtaaca ggagggcata gtctaacccg tggtgatgta
    21301 cgggtgatac aacaaacctc ggcacctgat aaacatgggg tttatcaagc gacagtggaa
    21361 attaaaaagc ctgatggaag ttgggaggtg aaaacgaaaa aaggtgggaa agtgatgacc
    21421 aagcacacca tgttcccaaa agattgggat gaggctagaa ttagggctga agttacttcg
    21481 gcttgggaga aaagaaagga attagaaggt caaaaatgga gaggtacaag taaatctggt
    21541 gttgaaatag aaggatttac ggaacctaat cgaacagctt atccacttta taatagtaaa
    21601 tgaagtattg attaaaaagg tgtttttaaa tgtataaaat aaaatgtttt tatgatcagt
    21661 ttagttctgg tgaattattt aactactgcc agtttttaga taattcttct aatcaaaaga
    21721 taaatacacg aggaacggtg tatcaatata t
//
LOCUS       DAWGKF010000015        21695 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.015, whole genome shotgun sequence.
ACCESSION   DAWGKF010000015 DAWGKF010000000
VERSION     DAWGKF010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21695)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21695)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21695
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.015"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            54..1094
                     /gene="murB"
                     /locus_tag="WHR07_000407"
     CDS             54..1094
                     /gene="murB"
                     /locus_tag="WHR07_000407"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEZ2129663.1"
                     /translation="MQPIRYRTDLTPYNTFGLRAQARAFIALEHADGLRDIVRLPEFN
                     RDTVLWLGGGSNILLMEDYAGLVVHMENKGIREIARSDGMVLIEAQAGEIWHDFVLHA
                     VALGLNGLENLSLIPGTVGASPVQNIGAYGVEAKDVIHSVRCFDLDTETFVTLSNADC
                     RFAYRESLFKQEGKGRYVIVSVVFALKTHFVPNLGYGDLAAAVAELSAGRVPTAKDVS
                     DAVCAIRNSKLPNPNVLGNVGSFFKNPVVSAEKAATLLQRHPDMPRYPQPDGSVKLAA
                     GWLIDQCRLKGFQIGGAAVHDRQALVLVNKNNASANDVRQLAQHIKFTVFARFQVELH
                     AEPNWLPASFSL"
     gene            1106..1756
                     /locus_tag="WHR07_000408"
     CDS             1106..1756
                     /locus_tag="WHR07_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEZ2129664.1"
                     /translation="MPVTRPAKINTYTRIIDASLALFNEEGERNISTNHIAAHLGISP
                     GNLYYHFRNKDEIIVQLFKRYSEALLEYLNEAVLPSDVEDSINYMAGIYDVMWEYRFL
                     FSDVNTLLARSAELLGEHNTFTQAKVSPLLVNLLTQLNGLNIIQADQTAMNDLAVNMW
                     MITKYWFDFDSSLRGRTKLTEDSKARGIRRTLSLLRPYLLPEHREKYDRKIGNGNP"
     gene            1811..2587
                     /locus_tag="WHR07_000409"
     CDS             1811..2587
                     /locus_tag="WHR07_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEZ2129665.1"
                     /translation="MRAVPPPHISITGLGYLGLPLAQKFYQHGSRVAAIKRSLTSDDI
                     NLPIHLDTFDLGSTDAFQTALWRHHADKPVWFFLLPPSSLTHYADTVKQWAELARACN
                     VQHLIFTSSTSVYGDTARECDETATPDPQTESARQILAAEQHLLDSGISNIDILRLGG
                     LYCAERHPVSRLVQKQNIPGGNRPINIVHRNIAVESLFQTAFNPGGRRLKNIIEPRHP
                     TRREFYTEEAAKLGLPAPDFAPDDSMGKIIRTVCDNSLSL"
     gene            2638..3204
                     /locus_tag="WHR07_000410"
     CDS             2638..3204
                     /locus_tag="WHR07_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HEZ2129666.1"
                     /translation="MSALLPIINRLILQSPDSRSELAAFAGKTLTLNIAGLKLAGRIT
                     EDGLLSAGNGFADTEITFRNSAVQKILQGGEPGAGDIGLEGDLILGIAVLSLLGSLRS
                     RASDELARIFGTQADIGSRAADIGHGIKQIGRNIAEQIGGFSRESESANIGNEALADC
                     LDEISRLRDGVERLNERLDRLERDIWID"
     gene            3224..4114
                     /locus_tag="WHR07_000411"
     CDS             3224..4114
                     /locus_tag="WHR07_000411"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HEZ2129667.1"
                     /translation="MNSPFHNIGIVTRPNTPDIQDTAHTLITFLKQHGFTVYLDEVGI
                     KEGCIYTQDTVGCHIVNKTELGQYCDLVAVLGGDGTFLSVAREIALRAVPIIGINQGH
                     LGFLTQIPREYMTDKLLPVLEGKYLAEERILIEAALIREGKTAERAIALNDAVLSRGG
                     AGQMIEFEVFVNREFVYTQRSDGLIVSTPTGSTAYSLAAGGPIMQAGLHAFTLVPICP
                     QSMTNRPIAIPDTSEIEILVTQGGDARVHFDGQTHIDVQNLDRITIRRYRNPLRILHP
                     TDYQYFKTLRQKLHWGEQLV"
     gene            4139..4897
                     /locus_tag="WHR07_000412"
     CDS             4139..4897
                     /locus_tag="WHR07_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEZ2129668.1"
                     /translation="MNPKISSDHTEDAVRLSKRMAQLGLCSRREADGYIEQGWVTVNG
                     KTAVLGQKVSPADRIELNKKAHEQQAARITILLNKPVGYVSAQAEKGYKSAAELITPE
                     NRWEGDTGRIRFDPKHKIGLAPAGRLDIDSVGLLVLTQDGRIAKQLIGENSGSEKEYL
                     VRVRGKLDEKGLALLNHGLSLDGEKLRPAQVEWQNEDQLRFVLKQGKKRQIRRMCELV
                     GLRVVGLKRIRMGKVKLGRLPPGKWRYLAPGESF"
     gene            complement(4952..5617)
                     /locus_tag="WHR07_000413"
     CDS             complement(4952..5617)
                     /locus_tag="WHR07_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEZ2129669.1"
                     /translation="MTVLDREQVLSAFKNRKSCRHYDAARKISAEDFQFILELGRLSP
                     SSVGSEPWQFVVVQNPEIRQAIKPFSWGMADALDTASHLVVFLAKKNARFDSPFMLES
                     LKRRGVTEPDAMAKSLARYQAFQADDIKILDDSRALFDWCCRQTYIALGNMMTGAAMA
                     GIDSCPVEGFNYADMERVLSGQFGLFDAAEWGVSVAATFGYRVQEIATKARRPLEETV
                     IWA"
     gene            complement(5730..6626)
                     /locus_tag="WHR07_000414"
     CDS             complement(5730..6626)
                     /locus_tag="WHR07_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE2"
                     /protein_id="HEZ2129670.1"
                     /translation="MQPPKASDIISHLQIDGIFPGGNAIPCTHLNNYMNIKEKQLMNT
                     IADVQSSRDLRNLPINQVGIKDLRFPITLQTAEGIQSTVARLTMTVYLPAEQKGTHMS
                     RFVALMEQHAEALDFAQLRRLTAEMVALLDSRAGKISVSFPFFRKKTAPVSGIQSLLD
                     YDVSLTGEMKDGAYGHSMKVMIPVTSLCPCSKEISQYGAHNQRSHVTVSLTADAEVGI
                     EEVIDYVEAQASCQLYGLLKRPDEKYVTEKAYENPKFVEDMVRDVATSLIADKRIKSF
                     VVESENFESIHNHSAYAYIAYP"
     gene            6694..7851
                     /locus_tag="WHR07_000415"
     CDS             6694..7851
                     /locus_tag="WHR07_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HEZ2129671.1"
                     /translation="MKFATQAIHSGYDCDEHNRALMPPIYQNSMFALHEIGENVPYRY
                     SRLSNPTRQVLEDTVADLEHGAAGFAFSSGMAGIDAVWRTFLQPGDTIVAVADIYGGA
                     YDLLVDVYQKWGVNVVFADLGNLDNLDKLLKAHKVKLVWLETPSNPLLRLVDIKALAA
                     KAKAAGALVGIDNTFATPYLQQPLDMGCDFVFHSATKYLCGHSDVLMGIVVAKTKELA
                     QPLHDMMVHTGAVAGPMDCWLVLRGIKTLALRMNAHCQNALEIARRLEAHPAIEKVFH
                     PGLPSHEHYELAQAQMPKGIGGVVTVYLKNDTREAANSVIKNMKLVKMASSLGGVESL
                     VNHCYSQSHSGVPHNVKMEMGIKVGLLRFSIGIEDADDIWNDISAALDTTL"
     gene            complement(7914..8915)
                     /gene="hemB"
                     /locus_tag="WHR07_000416"
     CDS             complement(7914..8915)
                     /gene="hemB"
                     /locus_tag="WHR07_000416"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEZ2129672.1"
                     /translation="MQFPYRNVPASRMRRMRRDDFSRRLMREHTLTADDLIYPVFVLE
                     GSAREEDVPSMPGVKRQSLDRLLFTAEEAVKLGIPMLALFPVVTANKTERAQEAYNPE
                     GLVPSTVRALRERFPELGIMTDVALDPYTVHGQDGLTDENGYVMNDETVEVLVKQALC
                     HAEAGAQVVAPSDMMDGRIGAIREALEDAGHIHTRIMAYSAKYASAFYGPFRDAVGSS
                     GNLGKADKKTYQMDPANTDEALHEVALDIQEGADMVMVKPGLPYLDVVRRVKDEFGVP
                     TYAYQVSGEYAMLQAAVANGWLDGDKVVLESLLAFKRAGADGILTYYAIEAAKMLKR"
     gene            complement(9098..9382)
                     /gene="yhbY"
                     /locus_tag="WHR07_000417"
     CDS             complement(9098..9382)
                     /gene="yhbY"
                     /locus_tag="WHR07_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HEZ2129673.1"
                     /translation="MTDTKLNTKEILELKARAHHLHPVVMVGQQGLTDAVIKETDAAL
                     TAHELIKVRVFGDDRAERIEICTALCEAVDAQPVQHIGKLLVLWRKNIEG"
     gene            9492..10112
                     /locus_tag="WHR07_000418"
     CDS             9492..10112
                     /locus_tag="WHR07_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HEZ2129674.1"
                     /translation="MAVRSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINEKD
                     KLIKPGTVLADLGSAPGSWSQVAAKLTGTSGAVFALDILPMEAIGGVSFIQGDFREND
                     VLAQFEGLLNNRPLDLVICDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFL
                     VKVFQGAGYQEYMAAMREIFGTVQTRKPEASRNRSSEIYLLGKNKR"
     gene            10176..12143
                     /gene="ftsH"
                     /locus_tag="WHR07_000419"
     CDS             10176..12143
                     /gene="ftsH"
                     /locus_tag="WHR07_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEZ2129675.1"
                     /translation="MGNTFKSILVWVALGIGLMAAFNALDGKKEDNGQIEYSQFIQQV
                     NNGEVSGVNIEGSVVSGYLIKGERTDKSTFFTNAPLDDNLIKTLLDKNVRVKVTPEEK
                     PSALAALFYSLLPVLLLIGAWFYFMRMQTGGGGKGGAFSFGKSRARLLDKDANKVTFA
                     DVAGCDEAKEEVQEIVDYLKAPNRYQSLGGRVPRGILLAGSPGTGKTLLAKAIAGEAG
                     VPFFSISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRQRGAGLGGGN
                     DEREQTLNQLLVEMDGFESNQTVIVIAATNRPDVLDPALQRPGRFDRQVVVPLPDIRG
                     REQILNVHSKKVPLDESVDLLSLARGTPGFSGADLANLVNEAALFAGRRNKVKVDQSD
                     FEDAKDKIYMGPERRSMVMHEDEKRATAYHESGHAIVAESLPFTDPVHKVTIMPRGRA
                     LGLTWQLPERDRISMYKDQMLSQLSILFGGRIAEDIFVGRISTGASNDFERATQMARE
                     MVTRYGMSDKMGVMVYAENEGEVFLGRSVTRSQNISEKTQQDIDAEIRRILDEQYQIA
                     YKILDENRDKMETMCKALMEWETIDRDQVLEIMAGKQPSPPKDYSHNLRENADAAEDN
                     APHAPTREETEAPAPADTASTESEQQPENKA"
     gene            12364..12795
                     /locus_tag="WHR07_000420"
     CDS             12364..12795
                     /locus_tag="WHR07_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HEZ2129676.1"
                     /translation="MKKVEKNILVLHGADKMFELVDKVEDYPHFLPWYSKTEVIGRSG
                     NELKARLFMDYMHVRQSFATHNRNIPGREIRMELLEGPFKTLRGTWKFIDLGDDMCKI
                     EFNLEYDFSNAVLSALISPVFNHLSVTLVEAFVKEADRRYA"
     gene            12788..13066
                     /locus_tag="WHR07_000421"
     CDS             12788..13066
                     /locus_tag="WHR07_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HEZ2129677.1"
                     /translation="MLEIEIVYGLPDRQVLKTMQLAEGTTVRAAALQSGLDGIFEDLN
                     LHSAPLGIFGKAVKDDTPLRDGDRIEVYRPLLIDPKEARRKRVQNQEE"
     gene            13119..13697
                     /gene="pth"
                     /locus_tag="WHR07_000422"
     CDS             13119..13697
                     /gene="pth"
                     /locus_tag="WHR07_000422"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEZ2129678.1"
                     /translation="MSNTIKMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEE
                     KKFFGEVARAALPDGDVWLLKPATFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPC
                     GRIKFKLGGGNGGHNGLKDIQAKLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHR
                     RQIDDAVAKSLQAIPDILAGKWEEATRFLHSK"
     gene            13758..13964
                     /locus_tag="WHR07_000423"
     CDS             13758..13964
                     /locus_tag="WHR07_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HEZ2129679.1"
                     /translation="MTELKQLIQTESIPVIEETLDFLLYECSIDDAPSAEEVAQWRDI
                     LAARGGKFLRLSKICQTWLDEEAA"
     gene            13961..14323
                     /locus_tag="WHR07_000424"
     CDS             13961..14323
                     /locus_tag="WHR07_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HEZ2129680.1"
                     /translation="MKLPRNRFSLLSALWFAGGIYSLLFKAADTAPPPFPHFDKAAHL
                     ALFFAQIWLLTKAFKTGKLPIPYRSLMVFALCFALFSECAQAWFTATRTGSLGDVLAD
                     LTGALLALFAARSADRPD"
     gene            14554..15969
                     /locus_tag="WHR07_000425"
     CDS             14554..15969
                     /locus_tag="WHR07_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13/DASS family transporter"
                     /protein_id="HEZ2129681.1"
                     /translation="MNLHAKDKTQHPENVELLSAQKPITDFKGLLTTIISAVVCFGIY
                     HILPYSPDANKGIALLIFVAALWFTEAVHITVTALMVPILAVVLGFPDMDIKKAMADF
                     SNPIIYIFFGGFALATALHMQRLDRKIAVALLRLSRGSMKAAVLMLFLVTAFLSMWIS
                     NTATAAMMLPLAMGMLSHLDREKERKTYVFVLLGIAYCASIGGLGTLVGSPPNLIAAK
                     ALNLDFVGWMKLGLPMMLLILPLMLLSLYVILKPNLNERVEIKAESIPWTLHRVIALL
                     IFLATAAAWIFSSKIKTAFGISNPDTVIALSAAVAVVVFGVAQWKEVARNTDWGVLML
                     FGGGISLSTLLKTSGASEALGQQVAATFSSAPAFLVILIVAAFIIFLTEFTSNTASAA
                     LLVPIFSGIAMQMGLPEQVLVFVIGIGASCAFMLPVATPPNAIVFGTGLIKQREMMNV
                     GILLNILCVVLVALWAYAVLM"
     gene            16088..16597
                     /locus_tag="WHR07_000426"
     CDS             16088..16597
                     /locus_tag="WHR07_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEZ2129682.1"
                     /translation="MIILHTNKGDIKIELDFDKAPVTAKNFEQYVKDGFYDGVIFHRV
                     IKGFMIQGGGMDENMNEKETRDPIQNEASNGLPNDKYTIAMARTSDPHSASAQFFINT
                     ADNAFLNFRSKELYGKTVVQDWGYAVFGKVVDGFDVVDAIEGVSTKRHGYHDDVPSEP
                     VVIIKAEAV"
     gene            16760..18142
                     /locus_tag="WHR07_000427"
     CDS             16760..18142
                     /locus_tag="WHR07_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HEZ2129683.1"
                     /translation="MANIAHDIFKAYDIRGIVGKTLTDEAAYLIGKAIATKASEKGIT
                     RIALGRDGRLSGPGLMAQIQHGFTDSSIDVLNVGMIATPMLYFAAINECGGSGVMITG
                     SHNPPDYNGFKMMLGGDTLAGEAIQELLAIVEKDGFVAADKQGSVTEKDISGEYHNNI
                     VGHIKLKRPMKIVIDAGNGVGGAFAGKLYKGLGNEVAELFCEVDGNFPNHHPDPSKPK
                     NLQDLIAALKNSDAEIGLAFDGDADRLGVVTKDGNIIYPDRQLMLFAQDVLSRNPKAK
                     VIFDVKSTRLLTPWIKEHGGEPVMEKTGHSFIKSAMKKTGALVAGEMSGHIFFKERWF
                     GFDDGLYAGARLLEILSASDNPSEVLNNLPQSISTPELNIALPEGSNGHQVIDELAAK
                     AEFEGATEIITIDGLRVEFPDGFGLMRASNTTPILVLRFEADTQEAIERIQNQFKAVI
                     ESNPNLIWPL"
     gene            complement(18162..18917)
                     /locus_tag="WHR07_000428"
     CDS             complement(18162..18917)
                     /locus_tag="WHR07_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEZ2129684.1"
                     /translation="MIKIRNIHKTFGESTILRGINLDVGKGQVVVILGPSGSGKTTFL
                     RCLNALEMPEDGQIEFDNERPLKIDFSKKPSKHDILALRRKSGMVFQQYNLFPHKTAL
                     ENVMEGPVAVQGKPAAQAREEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAI
                     QPELMLFDEPTSALDPELVQDVLNAMKELAREGWTMVVVTHEIKFALEVATTVVVMDG
                     GVIVEQGSPKELFDHPKHERTRRFLSQIQSTKI"
     gene            complement(18927..19643)
                     /locus_tag="WHR07_000429"
     CDS             complement(18927..19643)
                     /locus_tag="WHR07_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEZ2129685.1"
                     /translation="MFNNFLASLPFMTETRADMIVSAFLPMVKAGFAVSLPLAAASFV
                     IGMMIAVAVALVRIMPAGGIVRKILLKLVEFYISVIRGTPLLVQLVIVFYGLPSVGIY
                     IDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAF
                     RVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFC
                     KVLFLIQARLEKRFDRYVAK"
     gene            complement(19633..20460)
                     /locus_tag="WHR07_000430"
     CDS             complement(19633..20460)
                     /locus_tag="WHR07_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ2129686.1"
                     /translation="MMLKKFVLGGIAALVLAACGGSESGSGASSAPAQSAVSGSLIER
                     INNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKETQWDSMMA
                     GLKAGRFDVVANQVGLTSPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTA
                     QSLTSNYGEKAKAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGV
                     KIVWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFFGKDISVQ"
     gene            20745..21653
                     /locus_tag="WHR07_000431"
     CDS             20745..21653
                     /locus_tag="WHR07_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dyp-type peroxidase"
                     /protein_id="HEZ2129687.1"
                     /translation="MNTPQSAIIPDHAQAGIFIEADFAANRLNDIKAACRASLDALTA
                     LKARFPDDILGLTIAFGSKAWATFGHTDEGSEIKPFSEMGNGLAPSTQHDMSIHIQSF
                     RQNAAYALAQSVLGAFGDSICVASEEHGLRLYQDRGLDGFVDGTENPQGDENVREVAI
                     IPEGKPDAGGSYVLLQKYLHDLKKWDAVPVAEQEASVGRGKETDDEFGRDVRLPDSHL
                     GRVNLKENGVGLKIVRRSLPFGKISGEHGLMFTAYCRTLHNIEAQLLSMFGDTDGKTD
                     LLLRHLSAAVSGGYYYAPSVERLQNL"
BASE COUNT         5348 a         6385 c         5355 g         4607 t
ORIGIN      
        1 aaacgatggg ctgaagcccg ccactggcaa tactcatttt aaagttcaaa cccatgcaac
       61 ccatccgata ccgaaccgac cttaccccct acaacacttt cggcctgcgc gcccaagccc
      121 gagcctttat tgcgcttgaa cacgccgacg ggttgcgcga catcgtccgg ctacccgagt
      181 tcaaccgaga tactgtttta tggctgggcg gcggcagcaa tatccttttg atggaggact
      241 acgccggtct ggtcgtacat atggaaaaca aaggcatacg cgaaattgct cgttcagacg
      301 gcatggttct gattgaagcg caggcgggcg aaatctggca cgattttgtc ctgcacgccg
      361 tcgcgctggg tttgaacggt ttggaaaacc tgagcctgat tccgggtacg gtcggcgcgt
      421 cgcccgtgca gaacatcggc gcatacggcg tagaggcgaa agatgtgatt cacagcgtgc
      481 gctgcttcga tttggatacg gaaacctttg taaccctttc caatgccgac tgccgcttcg
      541 cctaccgcga aagcctgttc aagcaggaag gtaaagggcg ttatgtgatt gtttcggtcg
      601 tatttgcatt aaaaacgcat tttgtgccga acttgggtta cggcgatttg gcggccgccg
      661 ttgccgaact gagcgcgggc agggtgccga cggcgaaaga tgtttccgat gcagtgtgtg
      721 caatccgcaa cagtaaactt cctaatccta acgtgcttgg caatgtcggc agtttcttta
      781 aaaaccccgt cgtcagcgca gaaaaagccg ccaccttgtt gcagcggcat cctgatatgc
      841 cgcgctatcc gcagcccgac ggttcggtca aactcgccgc cggctggctg atcgaccaat
      901 gtcgtctgaa aggctttcaa atcggcggcg cggcggtaca tgacaggcag gctttggtct
      961 tagtgaacaa aaacaatgcc tcggcaaacg atgtccggca gttggcgcaa cacatcaaat
     1021 ttacagtatt tgctcggttt caggtagaat tgcacgccga acccaattgg ctgcctgctt
     1081 cgttcagcct gtaaatccaa ggagtatgcc cgtgacccgc cccgccaaaa tcaatactta
     1141 cacacgcatc atcgacgcca gccttgcgct tttcaacgag gaaggcgagc gcaacatcag
     1201 caccaaccat attgccgccc acttgggcat cagtccgggc aacctctatt accacttccg
     1261 caacaaagac gaaatcatcg tccaactgtt caaacgttac agcgaagccc tgctggaata
     1321 cctcaacgaa gccgtgttgc cgtctgatgt ggaagactcc atcaattata tggcgggcat
     1381 ttacgacgtg atgtgggaat accgcttcct attcagcgac gtgaacaccc tgcttgcacg
     1441 cagtgccgaa ctattgggcg aacacaatac cttcacccaa gccaaagtct ccccgctctt
     1501 ggtcaacctg ctgacccagc tcaacggtct gaacatcatc caagccgacc aaaccgccat
     1561 gaacgacctc gccgtcaata tgtggatgat cacgaaatac tggttcgact tcgacagctc
     1621 cctgcgcggc cgcaccaagc tgaccgaaga ctccaaagca cgcggcatcc gccgcacctt
     1681 aagcctcctt cgtccttatc ttttgcccga acaccgcgag aaatacgacc ggaaaatcgg
     1741 caacggcaac ccgtaaaccc acagcgtccg aatcagcctt cagacggcac ttacccgacg
     1801 gtatcagcga atgcgcgcag tccccccgcc ccatatctcc atcacaggcc taggttacct
     1861 cggcctgccg ctggcacaaa agttttacca acacggcagc cgcgtcgccg ccataaaacg
     1921 cagcctgact tcggacgaca tcaacctgcc catacatctc gacaccttcg acctcggcag
     1981 caccgatgcc tttcagacgg cattgtggcg gcaccacgcc gacaaacccg tctggttctt
     2041 cctgctaccg ccctcctcgc tgacgcatta cgccgacacc gtcaaacaat gggcagaact
     2101 tgcccgggcg tgcaacgtgc aacacctgat tttcacaagc agcaccagcg tttacggcga
     2161 tacagcgcgc gaatgcgacg aaaccgccac acccgatccg caaaccgagt ccgcccgcca
     2221 aatcctcgcc gccgaacaac acctgctcga cagcggcatc tccaacatcg acatcctgcg
     2281 gctgggcggg ctttattgcg ccgaacgcca tcccgtcagc cgccttgttc aaaagcaaaa
     2341 catcccgggc ggcaaccgcc ccatcaacat cgtccaccgt aatatcgccg tcgaaagcct
     2401 gtttcagacg gcatttaacc ccggcggcag gcggctgaaa aacattatcg aaccgcgcca
     2461 cccgacacga cgcgaattct acacggaaga agccgccaaa ctcggtttgc cggctcctga
     2521 tttcgcaccc gacgacagca tgggcaaaat catccgtacc gtttgcgata acagcttaag
     2581 cctgtaaaat aagtgtcaac agcaacaaac aggcattctc cgccccgatc agaaaatatg
     2641 tccgccctcc tccccatcat caaccgcctg attctgcaaa gcccggacag ccgctcggaa
     2701 cttgccgcct ttgcaggcaa aacactgacc ctgaacattg ccgggctgaa actggcggga
     2761 cgcatcacgg aagacggttt gctctcggcg ggaaacggct ttgcagacac cgaaattacc
     2821 ttccgcaaca gcgcggtaca gaaaatcctc caaggcggcg aacccggggc gggcgacatc
     2881 gggctcgaag gcgacctcat cctcggcatc gcggtactgt ccctgctcgg cagcctgcgt
     2941 tcccgcgcat cggacgaatt ggcacggatt ttcggcacgc aggcagacat cggcagccgt
     3001 gccgccgaca tcggacacgg catcaaacaa atcggcagga acatcgccga acaaatcggc
     3061 ggattttccc gcgaatccga gtccgcaaac atcggcaacg aagcccttgc cgactgcctc
     3121 gacgaaataa gcagactgcg cgacggcgtg gaacgcctca acgaacgcct cgaccggctc
     3181 gaacgcgaca tttggataga ctaaccttca gacggcatcc gacatgaaca gcccttttca
     3241 caacatcggc atcgtaaccc gccccaacac gcccgacatc caagacaccg cacacacgct
     3301 gattaccttt ttgaagcagc acggctttac cgtctatctc gacgaagtcg gcataaagga
     3361 aggctgcatc tatacccaag acaccgtcgg ctgccatatc gtcaacaaga ccgaactggg
     3421 gcaatactgc gacctggtcg ccgttttagg cggagacggc acctttctct ccgtcgcccg
     3481 cgaaatcgcc ctgcgcgccg ttccgattat cggcatcaac caagggcatt tgggcttcct
     3541 gacccaaatt ccccgcgaat atatgacgga caagctattg cccgttttag aagggaaata
     3601 ccttgccgaa gagcgcatcc tgattgaggc cgcactcatc cgcgaaggca aaaccgccga
     3661 acgcgccatc gccctcaacg atgccgtcct ctcccgtggc ggtgccggac agatgattga
     3721 gtttgaagtc ttcgtcaatc gggaattcgt ctatacccag cgttcggacg ggctgattgt
     3781 ctccaccccc accggatcga ccgcctattc gcttgccgcc ggcggcccca tcatgcaggc
     3841 aggattacac gccttcacgc tcgtccccat ctgcccgcaa tccatgacca accgccccat
     3901 cgccattcca gacacgtccg aaatcgaaat cctcgttacc caaggcggcg acgcgcgcgt
     3961 ccatttcgac ggtcaaaccc atatcgacgt gcaaaacctc gaccgcatca ccatccgccg
     4021 ctaccgaaat cccttacgca ttttgcaccc gaccgactac caatatttca aaaccctgcg
     4081 ccaaaaactg cactggggcg agcaattagt ctaagccggc ctttacccga aagtatccat
     4141 gaatcccaaa atttcctccg accatacaga agatgccgtg cgcctctcca aacgcatggc
     4201 gcaactgggg ctttgttcgc gccgcgaagc cgacggctac atcgaacagg gctgggtaac
     4261 ggtcaacggc aaaaccgccg tactcggtca gaaagtttca ccggccgacc gtatcgaact
     4321 gaacaagaaa gcccacgaac agcaggcggc acgcattacc atcctgctga acaaacccgt
     4381 cggctatgtc agcgcacaag cggaaaaagg ctataaatcc gccgccgaac tgattacccc
     4441 tgaaaaccgc tgggaaggcg acaccggccg catccgtttc gatccgaaac acaaaatcgg
     4501 cctcgccccc gccggcaggc tcgatatcga ttcagtcgga ttactggtat tgacgcagga
     4561 cggccgtatc gccaagcagc ttatcggcga aaacagcggc agtgaaaaag aatatttggt
     4621 gcgcgtgcgc ggcaaattgg acgaaaaagg acttgcctta ctgaatcacg gattgagttt
     4681 ggacggcgag aaactgcgtc ccgcccaagt agaatggcaa aacgaagacc aactgcgctt
     4741 cgtgttgaaa cagggtaaaa agcggcaaat ccgccgtatg tgcgaactgg tcggactgcg
     4801 cgtcgtcggg ctgaaacgca tccgcatggg caaggtcaaa ctcggcaggc tgccgcccgg
     4861 caaatggcgt tatcttgctc ccggcgaatc gttttaaata agcattaaaa aatgccgtct
     4921 gaaaatcctt gcgttttcag acggcattgc cttatgccca aataacggtt tcttccaagg
     4981 gcctgcgcgc cttcgtggcg atttcctgaa cgcggtaacc gaatgtcgcg gcgacggaca
     5041 cgccccattc tgccgcatcg aacaaaccga actgcccgga caatacgcgt tccatatcgg
     5101 catagttgaa accttccacc gggcaggaat cgatacctgc catcgccgca cccgtcatca
     5161 tgttgcccaa cgcgatatag gtctggcggc aacaccagtc aaacaaggcg cgcgaatcgt
     5221 ccaaaatctt gatgtcgtcg gcttgaaacg cctgatacct cgccaaagat tttgccatgg
     5281 catccggttc ggtaacgccg cgccgtttga ggctttccaa cataaacggg ctgtcgaagc
     5341 gggcattttt ctttgccaaa aacaccacca aatgactggc ggtatccaaa gcatccgcca
     5401 taccccaaga aaacggcttg attgcctgtc ggatttcagg gttttgaacc acaacaaact
     5461 gccaaggctc cgaaccgacc gaactgggcg acaaacgccc gagttctaaa ataaactgaa
     5521 aatcctcggc actgatttta cgtgccgcat cgtaatgccg gcatgatttg cggtttttaa
     5581 atgcggatag aacctgctct ctgtctaata ccgtcatagt gcatccttta ttacttttat
     5641 tgcaaattga tttcaaaccg atacggcggc agattcgcca ataacgccca aacgcctttc
     5701 agacggcatt tggttcatcg caaacacgcc tacgggtagg cgatataggc ataagccgaa
     5761 tggttgtgga tagattcgaa attctcactc tcgacgacga aactcttgat gcgtttgtcg
     5821 gcaatcagcg aagtagcgac atcgcgcacc atatcttcca cgaatttcgg gttttcgtag
     5881 gccttttcgg taacgtattt ttcatcgggg cgtttgagca ggccgtagag ttggcagctc
     5941 gcctgcgcct ccacataatc gatgacttcc tcgataccga cttcggcatc ggcagtcagg
     6001 ctgacggtaa cgtgcgaacg ctggttgtgc gcgccgtatt gggaaatttc tttggaacac
     6061 gggcaaagcg aggttacggg aatcatgacc ttcatactgt ggccgtatgc accgtctttc
     6121 atttcgcccg tgaggctgac atcataatcc agtaaagact gaataccgga aaccggggcg
     6181 gttttcttgc ggaaaaatgg gaaagaaacg ctgattttgc cggcgcggga atccaaaagc
     6241 gcgaccattt cagcagtcag cctgcgcaat tgtgcaaaat ccaaggcttc ggcatgttgc
     6301 tccatcaatg cgacaaagcg cgacatatgc gtacccttct gctcggcggg caggtaaacc
     6361 gtcatggtca gacgggcaac tgtggactgg atgccttctg cagtttgcag ggtaatcgga
     6421 aagcgcaggt ctttgatacc gacctgattg atcggcagat tgcgcaaatc tcggctggat
     6481 tgcacgtctg caatagtgtt catgagttgt ttttccttaa tattcatgta attgttgaga
     6541 tgtgtgcatg gtatggcgtt tccgccgggg aatataccgt caatctgcaa atgcgagatt
     6601 atatcacttg cttttggcgg ctgcattgat tgtttctatt ttcgggatag tgataaaatc
     6661 ccgacttatt catatcttac aaggcagaaa cagatgaaat tcgccaccca agccatccat
     6721 tccggctacg attgcgacga acacaaccgc gcgctgatgc cgccgattta tcaaaacagt
     6781 atgtttgcgc tgcacgaaat cggcgaaaat gtgccttacc gctattcacg tctgagcaac
     6841 ccgacccgtc aggtattgga agataccgtt gccgatttgg aacacggtgc ggcaggtttt
     6901 gcgttttcca gcggtatggc agggattgat gccgtatggc gcaccttcct gcaaccgggc
     6961 gataccattg tcgccgtcgc cgatatttac ggcggcgcgt atgatttatt ggtcgatgtt
     7021 tatcaaaaat ggggggtgaa cgttgttttt gccgatttgg gcaatctgga taatttggac
     7081 aagctgctta aagcgcacaa ggtcaaactg gtttggctgg aaacgccgtc caatccgctt
     7141 ttgcgcttgg tagacatcaa agcgcttgcc gcgaaagcca aagcggccgg cgcactggtc
     7201 ggcatcgaca acacctttgc cacgccgtat ctgcaacagc ccttggatat gggttgcgat
     7261 tttgtgttcc attccgctac caaatatttg tgcggccatt ccgacgtgtt gatgggcatc
     7321 gtcgttgcca aaaccaaaga gctggcgcag cctttgcacg atatgatggt gcataccggc
     7381 gcggttgccg gcccgatgga ctgctggctg gtgttgcgcg gcatcaaaac actggctctg
     7441 cgcatgaacg cccattgcca aaacgcactc gaaatcgcgc gccgtttgga agcccatcct
     7501 gccattgaaa aagtgttcca tcccggcctg ccgtctcacg aacattatga actcgcccaa
     7561 gcgcaaatgc ctaaaggcat cggcggcgtg gtgacggttt atctcaaaaa cgacacgcgc
     7621 gaagcggcaa acagcgtgat taaaaacatg aaactggtca aaatggcttc cagcctcggc
     7681 ggcgtggaaa gtttggtcaa ccattgctat tcccagtccc acagcggcgt gccgcataat
     7741 gtgaaaatgg aaatgggcat caaagtcggc ctgctgcgtt tctccatcgg catcgaagac
     7801 gcggacgata tttggaacga tatttccgcc gcactcgata caactttgta aaccgtaaaa
     7861 atgccgtctg aaaccatagt ttcagacagc atttcaatat tgcgaatcaa atatcaacgc
     7921 ttcagcatct tggccgcctc aatggcataa taggtcaaaa tcccatccgc gcccgcacgt
     7981 ttgaatgcca gcaggctttc caaaaccact ttatcgccgt ccagccatcc gttggcaacc
     8041 gccgcctgca gcatcgcata ttcgcccgaa acctgatagg cataagtcgg cacaccgaac
     8101 tcgtccttca cgcggcggac aacgtccaaa tacggcaaac cgggcttcac catcaccata
     8161 tccgcacctt cctgaatatc gagcgctact tcatgcagcg cctcatcggt gtttgcggga
     8221 tccatctgat aggtcttttt atctgccttg cccaaattgc ccgaactgcc taccgcatca
     8281 cggaaagggc catagaatgc agaagcatat ttggcggaat atgccataat ccgcgtgtgg
     8341 atatgtccgg catcctccaa cgcctcgcga atcgcaccga tacgcccgtc catcatatcc
     8401 gacggagcaa ccacctgcgc gcccgcttca gcgtggcaca aagcctgctt gaccaaaacc
     8461 tctacggttt catcgttcat cacataaccg ttttcgtccg tcagcccgtc ctgaccgtga
     8521 accgtataag gatcgagcgc gacatccgtc ataatgccca gttcgggaaa cctctcgcgc
     8581 aaggcgcgga cagttgacgg cacgagtcct tcgggattgt acgcctcctg cgcacgctcg
     8641 gttttgtttg ccgtaaccac ggggaacagt gccaacatcg gaataccgag ctttaccgcc
     8701 tcttccgccg taaacagcag cctgtccaaa ctttgacgct tcacacccgg catagaaggc
     8761 acatcctcct cgcgcgccga cccctccaat acgaacaccg gataaatcaa atcatcggcg
     8821 gtcagcgtgt gttcgcgcat caggcggcgt gaaaaatcgt ccctgcgcat acggcgcata
     8881 cgcgaagccg gaacattgcg gtaaggaaac tgcataagcc ctccaatcat cctgtcaaca
     8941 attcaaacca tacggaagcc gccgcaactt gcagacagca tcgggcggca atcaaaatcc
     9001 gttttcaccg gaaagggttt cggcccgccg aaatgccgcg ccgaaggacg gcgtcccgcc
     9061 cattaaagaa caatagcaaa acaacagctt caggctgtca gccttcgata ttcttacgcc
     9121 acaataccaa aagtttcccg atatgctgaa caggttgcgc gtcaaccgcc tcacataagg
     9181 cagtgcagat ttcgatacgt tcggcacggt cgtcgccgaa tacgcgcact ttaatcagct
     9241 catgcgccgt caatgccgca tcggtttcct tgatgaccgc gtccgtcaga ccctgctgac
     9301 cgaccatcac aacaggatgg agatggtgcg cgcgcgcttt cagttccaaa atttctttgg
     9361 tgttcaattt ggtatccgtc attttcctac tgcttgaata aaaagaataa tgcggcattg
     9421 tacgcgattt ggcacgacat cggcaaaatt aacgtacaat acgcggtttc cattccgacc
     9481 cgcgaaccac tatggctgta cgttccaaat cctcaaaagc gtggctgcac gaacacgtca
     9541 acgaccacta cgtccatatg gcgcaaaaag acggctaccg cgcccgtgcc gcatacaaac
     9601 ttttggaaat caacgaaaaa gacaaattaa tcaaacccgg cacggtactt gccgacttgg
     9661 gcagcgcacc gggaagctgg tcgcaggttg ccgccaagct gacgggtact tccggagcag
     9721 ttttcgcctt ggacatcctg cctatggaag ccataggggg cgtctccttc attcagggcg
     9781 acttcaggga aaacgacgtt ttggcgcaat ttgaaggctt attaaacaac cgccccttag
     9841 accttgtaat ctgcgatatg gcgcccaata tgtcgggaaa cgccgtaagc gatcaggcgc
     9901 gcagctttta tttgtgcgaa ctggctttgg acttcgcctc gcaacacctg aaaaccggcg
     9961 gcagcttttt ggtcaaagtc tttcagggtg caggctatca ggaatacatg gcagccatgc
    10021 gcgaaatttt cggcacggtg cagacgcgca aacccgaagc ctcgcgcaat cgctccagtg
    10081 agatttattt attgggcaaa aataaacgct gacaatacag acggcgtgct ttacaatcat
    10141 ttccgtttta cacctcaatt atggagcctt gctaagtggg gaacaccttt aaatcaatcc
    10201 ttgtctgggt cgccttgggt atcggcctga tggctgcgtt caacgcttta gacggtaaaa
    10261 aagaagacaa cgggcaaatc gaatattctc agttcatcca acaggtcaac aacggcgaag
    10321 tatccggcgt caacatcgaa ggatccgtcg tcagcggcta cctgattaag ggcgagcgca
    10381 ccgacaaaag caccttcttc accaacgcgc ctttggacga caacctgatt aaaacactgc
    10441 tcgacaaaaa cgtccgtgta aaagtaacgc cggaagaaaa accgagcgcg ctggctgccc
    10501 tgttttacag cctgctgccc gtcctgctgc tgattggcgc gtggttctac tttatgcgta
    10561 tgcagacggg cggcggcgga aaaggcggcg cattctcatt cggcaaaagc cgcgcccgcc
    10621 tactggacaa agatgccaac aaagtgacct ttgccgatgt cgccggctgc gacgaagcca
    10681 aagaagaagt gcaggaaatc gtcgattacc tcaaagcgcc gaaccgctat caaagcctgg
    10741 gcgggcgcgt gccgcgcggc atcctgctgg cgggcagccc gggtacgggt aagacgcttt
    10801 tggcgaaagc gattgcaggc gaagccggcg tgccgttctt cagcatttca ggttccgact
    10861 ttgtcgaaat gttcgtcggt gtcggtgcaa gccgcgtccg cgatatgttc gagcaggcga
    10921 agaaaaacgc cccctgcatc atctttatcg acgagattga cgcagtcggc cgccaacgcg
    10981 gcgcaggttt gggcggcggc aatgatgagc gcgagcaaac attaaaccaa ttgttggttg
    11041 aaatggacgg ttttgagagc aatcagactg taattgtgat tgcggcaacc aaccgccccg
    11101 acgtactcga tcctgcgctg caacgccccg gccgtttcga ccgccaagtc gtcgtccccc
    11161 tgccggacat ccgggggcgc gaacagattt tgaacgtcca ttctaaaaaa gtgcctttgg
    11221 acgaatctgt ggatttattg tccctcgcgc gcggcacgcc gggtttttcc ggtgcggatt
    11281 tggcaaacct ggttaacgaa gccgccctgt ttgccggccg ccgcaacaaa gtcaaagtcg
    11341 atcaaagcga ttttgaagac gcaaaagaca aaatctatat gggtccggaa cgccgcagta
    11401 tggtgatgca cgaagacgaa aaacgtgcga cggcgtatca tgagtccgga cacgcgattg
    11461 ttgccgaaag cctgcccttt accgaccccg tccacaaagt aaccattatg ccgcgcggac
    11521 gtgcgctggg tctgacttgg cagcttccgg agcgcgaccg catcagtatg tataaagatc
    11581 agatgttgag ccagctctcc atcctgttcg gcggacggat tgccgaagac atcttcgtcg
    11641 gacgcatctc caccggcgca tcaaacgact ttgaacgcgc aacccaaatg gcgcgcgaaa
    11701 tggtaacgcg ctacggcatg agcgacaaaa tgggcgtgat ggtttatgcg gaaaacgaag
    11761 gcgaagtctt cttaggacgc agcgtaaccc gttcgcaaaa catttccgag aaaacccagc
    11821 aggacatcga tgcggaaatc cgccggattt tggacgagca gtatcagatt gcctacaaaa
    11881 tcctcgatga aaaccgcgac aagatggaaa ccatgtgcaa agccctgatg gaatgggaaa
    11941 ccatcgaccg cgatcaggta ctggaaatca tggcgggcaa acaacccagt ccgcccaagg
    12001 attacagcca caacctgcgc gagaatgcgg acgcggcgga agataacgcg ccgcacgctc
    12061 cgactcggga agaaaccgaa gcacctgccc cggcagacac cgcttcgaca gagtccgagc
    12121 agcagcctga aaacaaggct taacttcccg aacaaacggc agcccgcaag ctgccgtttt
    12181 cccatcctgt tttcagacgg cattttccgc tcaatgccgt ctgaaacgcc aaagccgtat
    12241 cggtttttgc ggatctgcga tatggcggtt taaattgaaa tcagacgagg caaggctgta
    12301 ccggtttaaa attaaaccgc tataataccg cccttcgaat acacgcccgc attggtgatg
    12361 cctgtgaaaa aagttgaaaa aaacatcttg gtgctgcacg gcgcggacaa aatgttcgag
    12421 ctggtcgata aggttgaaga ctatccgcac tttctgccgt ggtacagcaa gaccgaggtc
    12481 atcgggcgta gcggcaacga actgaaggcg cggctgttta tggactatat gcacgttcgc
    12541 caatcattcg ccacgcacaa ccgcaacatt ccgggcaggg aaatccgtat ggaactgctc
    12601 gagggtccgt tcaaaacctt acgtggaacg tggaaattta tcgatttggg cgacgatatg
    12661 tgcaaaatcg aattcaattt ggaatacgat ttttccaatg ccgttttgtc cgccttaatt
    12721 tcccccgtct tcaaccacct ttccgtcacg ctggtcgaag cgttcgtcaa agaggcagac
    12781 cgccgttatg cttgaaattg agattgtgta cgggctgccc gaccgacagg ttttgaaaac
    12841 catgcagctt gccgaaggaa caaccgtccg cgccgccgca ctgcaaagcg gtttggacgg
    12901 catatttgaa gatttaaacc tgcattccgc gcctttgggc attttcggca aagccgtcaa
    12961 agacgacacg ccgctgcgcg acggcgaccg catcgaagtg taccgcccgc tgttgatcga
    13021 ccccaaagaa gcgcgccgca aacgcgttca aaatcaagaa gaataaccat gccgtctgaa
    13081 gccttcagac agcattcgac agaaacacgg aaaatatcat gtcaaacaca atcaaaatgg
    13141 ttgtcggctt gggcaacccg ggcaaagaat acgaacagac acgccacaat gcgggttttt
    13201 ggttcctcga cgaactggcg tggaaatgga aggcttcatt taaagaagaa aaaaaattct
    13261 tcggcgaagt cgcccgtgcc gccctgcccg acggcgacgt ttggctgctc aaacctgcca
    13321 cgttcatgaa ccgttccgga caggcagttg ccgcccttgc gcagttttat aaaatcaaac
    13381 ccgaagaaat cctcgtcgtc cacgacgaac tcgacattcc ctgcggacgg atcaaattca
    13441 aactcggcgg cggcaacggc ggacacaacg gcttgaaaga cattcaggca aaactcggca
    13501 cggcagacta ttaccgtctg cgcctcggca tcggccaccc gggcgaccgc aacctcgtcg
    13561 tcggctatgt cctgaacaaa cccagtacgg aacaccgccg acagattgac gatgccgtcg
    13621 ccaaatccct gcaggccata cccgacatcc ttgccggcaa atgggaagag gcaacccgct
    13681 tcctgcacag caaatgaccc gatgccgtct gaagcccttt cagacggcat gttcccgatt
    13741 tccatatccg aacagtcatg accgaactca agcagcttat ccaaaccgaa tccatccccg
    13801 tcatcgaaga aaccctcgat ttcctgctgt acgaatgcag catcgacgac gcaccatccg
    13861 ccgaagaagt ggcacaatgg cgcgacatac ttgccgcacg cggcggcaaa ttcctgcgcc
    13921 tgtccaaaat ctgccaaacg tggctggacg aggaggcggc atgaagctgc cgcgcaaccg
    13981 cttcagcctg ctttccgcat tgtggtttgc cggcggcatc tattcgctgc tcttcaaagc
    14041 tgccgacacc gcgccgccgc cgtttccgca tttcgacaaa gcagcacacc ttgccctgtt
    14101 tttcgcacaa atctggcttt tgaccaaagc attcaaaacc ggaaaacttc ccatccccta
    14161 ccgcagcctg atggtctttg ccctctgttt cgccctcttc agcgaatgcg cgcaggcatg
    14221 gtttaccgca acgagaaccg gcagtttggg cgatgtcctt gccgacctga cgggtgcatt
    14281 gctcgcactc tttgccgcac gttccgccga ccgcccggac tgaatcggtt tattttcccc
    14341 aaacaggatg cacctcttcc cgatacatcc tatttttccc cttacatatc aatctcatct
    14401 cataaacaaa accgacaaat cgtttacaat atatttacac tacatcagat tacaaatata
    14461 ctcgaaccag ttgcagaagc ggcgattcca caaaccgttt cggattgcac gacacaaaag
    14521 aaaaaccgat tttgttgcct taaaggagta ttcatgaacc tgcatgcaaa ggacaaaacc
    14581 cagcatcccg aaaacgtcga gctgctcagt gcgcagaagc cgattaccga ctttaagggc
    14641 ctgctgacca ccattatttc cgccgtcgtc tgtttcggca tttaccacat cctgccttac
    14701 agccccgatg ccaataaagg tatcgcgttg ctgattttcg ttgccgcact ttggtttacc
    14761 gaagccgtcc acattaccgt aaccgcactg atggtgccga ttctcgccgt cgtactcggt
    14821 ttccccgaca tggacatcaa aaaggcgatg gctgattttt ccaacccgat tatctacatt
    14881 tttttcggcg gcttcgcgct tgccaccgcc ctgcatatgc agcggctgga ccgtaaaatc
    14941 gccgtcgccc tgctgcggct gtcgcgcggc agtatgaagg ccgccgtgct gatgttgttc
    15001 ctcgttaccg cctttctgtc catgtggatc agcaacaccg ccaccgccgc gatgatgctg
    15061 cctctggcaa tgggtatgct gagccacctc gaccgggaaa aagaacgcaa aacctacgtc
    15121 ttcgtcctgc tcggcatcgc ctattgcgcc agcatcggcg gcttgggcac gctcgtcggc
    15181 tcgccgccca acctgattgc cgccaaagcc ctaaatctgg acttcgtcgg ctggatgaag
    15241 ctcggcctgc cgatgatgct gttgattctg cccttgatgc tgctctccct gtacgtcatc
    15301 ctcaaaccta atttgaacga acgcgtggaa atcaaagccg aatccatccc ttggacgctg
    15361 caccgcgtga tcgcgctgtt gattttcctt gccacagccg ccgcgtggat attcagctcc
    15421 aaaatcaaaa ccgccttcgg catttccaat cccgacaccg ttatcgccct gagtgccgcc
    15481 gtcgccgtcg tcgtcttcgg cgtggcgcaa tggaaggaag tcgcccgcaa taccgactgg
    15541 ggcgtgttga tgctcttcgg cggcggcatc agcctgagca cgctgttgaa aacatccggc
    15601 gcgtccgaag ccttgggaca gcaggttgcc gccacctttt ccagcgcgcc cgcatttttg
    15661 gtgatactca tcgtcgccgc cttcattatt tttctgaccg agttcaccag caacaccgcc
    15721 tccgccgcat tgcttgtacc gattttctcc ggcatcgcta tgcagatggg gctgcccgaa
    15781 caagtcttgg tattcgtcat cggcatcggc gcatcttgtg ccttcatgct gccggttgcc
    15841 acaccgccta acgcgattgt gttcggcacg ggcttaatca agcaacgcga aatgatgaat
    15901 gtcggcatac tgctgaacat cctctgcgta gtattggttg ctctgtgggc ttatgctgta
    15961 ctgatgtaaa ccatcgacct aaacaacaag accgtctgaa agaatatttt tcagacggcc
    16021 ttgaagtttg tcgttcagac acaatttgtc gaatcattca aaaccggatt ctaacgaaag
    16081 gaaacccatg attatcctgc acaccaacaa aggcgacatc aaaatcgaac tcgatttcga
    16141 caaagccccc gttaccgcca aaaacttcga gcaatacgtc aaagacggct tctacgacgg
    16201 cgtaatcttc caccgcgtca tcaaaggctt catgattcaa ggcggcggca tggatgaaaa
    16261 catgaacgaa aaagaaaccc gcgatccgat tcaaaacgaa gcgtccaacg gcctgcccaa
    16321 cgataaatac accatcgcca tggcacgcac ttccgacccc cattccgcca gcgcgcaatt
    16381 cttcatcaac actgccgaca acgctttcct gaacttccgt tctaaagagc tgtacggcaa
    16441 aaccgtcgtc caagactggg gctatgccgt attcggtaaa gtcgttgacg gttttgacgt
    16501 tgtcgatgcc atcgaaggcg tatccaccaa acgccacggc taccatgacg acgtaccgag
    16561 cgaacctgtc gtcatcatta aagccgaagc ggtataaacc ggcaatccga aagcagcctg
    16621 cacaaaggct gctttttttg tttcaggcgg cataaaatcc aagcacatat gccgtctgaa
    16681 cacctcccgc aagccttcgg acaatgttgc aacgtgttaa aatagcctcc tttcctgaaa
    16741 ccgaaacgag ggaaccccta tggcaaatat cgcccacgac attttcaaag cctacgacat
    16801 ccgaggcatc gtcggtaaaa ccctgaccga cgaagctgcc tatttaatcg gcaaagccat
    16861 tgccaccaaa gcctccgaaa aaggcattac ccgcatcgcc ctcggccgcg acggccgttt
    16921 gagcggcccc ggcctgatgg cacaaattca acacggtttt acagacagca gcatcgacgt
    16981 cctcaacgtc ggcatgattg ccactcctat gctctacttc gcagccatca acgaatgcgg
    17041 cggcagcggc gtgatgatta ccggcagcca caatccgccc gattacaacg gtttcaaaat
    17101 gatgctcggc ggcgacacgc tcgcaggcga agccattcaa gaacttttag ctattgttga
    17161 gaaagacggt tttgttgccg ccgacaaaca aggcagcgta accgaaaaag acatctccgg
    17221 cgaataccac aacaacatcg tcggccacat taagctcaaa cgtccgatga aaatcgtgat
    17281 tgacgcgggc aacggtgtcg gcggcgcgtt tgccggcaaa ctctacaaag gtttgggcaa
    17341 tgaagtggcc gaacttttct gcgaagtgga cggcaatttt cctaatcacc accctgatcc
    17401 ttccaaaccc aaaaacctgc aagatttgat tgccgcgctg aaaaacagcg atgccgaaat
    17461 cggcttggct tttgacggcg atgccgaccg cttgggcgtg gtcaccaaag acggcaacat
    17521 tatttatccc gaccgccaat taatgctgtt cgcccaagac gtgttgagcc gcaatcctaa
    17581 agcaaaagtg attttcgatg tcaaatccac ccgcctgctg accccgtgga ttaaagaaca
    17641 cggcggcgaa cctgtgatgg aaaaaaccgg ccacagcttt atcaaatccg ccatgaaaaa
    17701 aaccggcgcg ctggttgccg gcgaaatgag cggacacatc ttcttcaaag aacgctggtt
    17761 cggcttcgac gacggtctgt acgccggcgc acgcctcttg gaaatcctgt ctgcctccga
    17821 taatccgtcc gaagtgttaa acaacctgcc gcaaagcatt tccacgcccg aactcaacat
    17881 cgccctgccc gaaggcagca acggccatca ggttatcgac gaactcgccg ccaaagccga
    17941 atttgaaggc gcaaccgaaa tcatcaccat cgacggtctg cgcgttgaat ttcccgacgg
    18001 cttcggtctg atgcgtgctt ccaataccac gccgattctg gtgttgcgtt ttgaggcgga
    18061 tacgcaagaa gccatcgagc ggattcaaaa ccaattcaaa gccgtcatcg aaagcaatcc
    18121 gaatctaatc tggcctctgt aaacacagga aaaatgctta atcaaatctt ggtagattgg
    18181 atttggctta aaaatctccg cgtccgttcg tgtttggggt ggtcgaacaa ctctttcggg
    18241 ctgccctgct ctacgataac gccgccgtcc atcacgacaa cggtcgtggc aacttccagc
    18301 gcgaacttga tttcgtgggt aacgacgacc atcgtccaac cttcccgcgc caattccttc
    18361 atggcgttca acacgtcttg caccaattca gggtcgagtg cggaagtggg ttcgtcaaac
    18421 aacatcagct cgggctgaat cgccaatgcg cgggcaatgc cgacgcgctg ctgctgaccg
    18481 ccggaaagct ggtagggata caaatccact ttgtcgccca agccgacttt ttccagcagt
    18541 ttcagagcct cttcgcgcgc ttgggcggca ggcttgccct gtacggcaac cggtccttcc
    18601 attacgtttt ccaaggcggt tttgtgcgga aagaggttgt attgttgaaa caccatgcct
    18661 gatttgcggc gcagtgccaa aatatcgtgt ttgcttggtt ttttagaaaa atcgattttc
    18721 agcggtcgct cgttgtcgaa ctcgatttgt ccgtcttcgg gcatttccaa cgcgtttagg
    18781 catcgcagaa acgtcgtttt gcctgagccg gaaggcccga ggataacgac cacctgccct
    18841 ttgcccacat ccaaattgat gccgcgcaaa atagtgcttt cgccgaaggt cttatggata
    18901 ttgcggattt taatcataac aactccttat ttggcgacat aacggtcgaa acgtttttcc
    18961 aaacgtgcct gaatcaggaa cagaaccttg caaaaacacc agtaaaccaa agcggcttcg
    19021 atatagacgg gcaaaaagtc ataagtgcgg tttgccgttt cctgcgcgac gcggaataat
    19081 tccgttaccg tcacgactgc cgcgagcgag gtgtttttaa acaaaccgat aaactcgttg
    19141 ctcaaaggcg gcacggcaac gcgaaatgcc tgcggcgcga cgatgcggcg gaacgtctgc
    19201 atataggtca taccgatgga gaaacctgct tcccattggc ctttaggtac ggacaaaatt
    19261 gccgcgcgta tggtttcgga agcgtatgca ccgacattga gcgagaagcc gataatggcg
    19321 gcgggaatcg gatcgatata gataccgacg gaaggcagcc cgtaaaacac aatcacaagc
    19381 tgaaccaaca gcggcgtacc gcgaatgacg gaaatataaa attccaccaa tttcagcagg
    19441 attttccgca cgatgccgcc ggcgggcata atccgcacca aagccacggc taccgcaatc
    19501 atcataccga taacgaaaga agctgccgcc aaaggcagag agaccgcgaa gccggctttg
    19561 accataggca aaaacgcgct gacaatcata tcggcgcgtg tttccgtcat aaacggcagc
    19621 gaagcaagga aattattgaa cactgatgtc ttttccgaag aattgttcgc ccagtttttt
    19681 cagcgtaccg tcggctttca gctcgttgat tgccgtactg aatttcgcca cggcttcgtc
    19741 attgcccttg ttgacaatca ggccggaacc gactttttca tcggcaggtg cggaccaaac
    19801 gattttcacg cccgcattcg ggtttttctt cagatagtcc aaaaccgcca attcgtcgtt
    19861 cagggttgca tcggcacgtt tttgttcaat cagggtcagc gattgcgcca aaccgtccac
    19921 tgccaccaaa tctgcgcctg cagctttggc tttttcgccg tagttgctgg tcagggattg
    19981 tgcggttttc acgcctttga tgtcgtcgat agatttgatg ttgctgtcgt tacgggcaac
    20041 caatacggca ccgctccagc tgtaaggatc ggatttgtcg aatgtcgctt ggcgttcggg
    20101 gctggtcaga ccgacttggt ttgccaccac gtcgaaacgc cccgccttca aacccgccat
    20161 catcgaatcc cattgcgttt ctttaaactc gactttcacg cccagttttt ccgccacggc
    20221 gcgggttact tccacatcgt aaccggtcag tttgccgtcc ttgtcgtggt aggtaaacgg
    20281 tgcgtaagtg ccttccgtgc cgacggtaac cgtgccttta ttgttgatgc gctcgattaa
    20341 agaaccggaa actgccgatt gtgcaggcgc ggaagatgct ccgctgccgc tttccgaacc
    20401 gccgcaggcc gccaaaacca atgcggcaat gccgccgagt acgaattttt tcaacatcat
    20461 tctctcctgt aaaaagtgtg caagtgcggc attctaagtg aaattgcggc aaacacaaag
    20521 aatacttttt ttatatggtt attccaaatc ggaatggaaa agatatgccg aaaccgccgg
    20581 aagcggaaat aaagggggcg ggaaaggcga cgggcggcac gaaaccgaaa agcggcatca
    20641 ggtatgcaaa cggcggattc acgcacgccg ttccggcaaa aatccgcctg ccgattcggt
    20701 gctataatcc atccgaaaca gatgacacca aaaaggaaca tctcatgaac acgccccaat
    20761 ccgccatcat tcccgaccac gcccaagccg gcatctttat cgaagccgac ttcgccgcca
    20821 accgcctcaa cgatattaaa gccgcctgcc gcgcttcgct cgacgcgtta actgccttga
    20881 aagcccgctt tccggacgat attttgggtc tgaccatcgc cttcggcagc aaagcctggg
    20941 caacattcgg acatacggac gaaggcagtg aaatcaaacc cttctccgaa atgggcaacg
    21001 ggcttgcgcc gtccacgcag cacgatatgt ccatccacat ccaatccttc cgccaaaacg
    21061 ccgcctacgc gcttgcccaa tccgttttag gcgcgttcgg cgacagcata tgcgtcgcgt
    21121 ccgaagaaca cggtttgcgc ctgtatcagg atcgcggact ggacggtttc gtcgacggca
    21181 cggaaaaccc gcagggcgat gaaaatgtcc gcgaagtcgc catcatcccc gaaggaaaac
    21241 ccgatgcggg cggcagctat gtcctgctgc aaaaatacct gcacgatttg aaaaaatggg
    21301 atgccgtccc cgtcgccgaa caggaggcct cggtcggacg cggcaaggaa accgacgacg
    21361 aattcggccg cgatgtccgc ctgcccgatt cgcacctcgg ccgcgtcaac ctgaaagaaa
    21421 acggagtcgg cctgaaaatc gtccgccgca gcctgccctt cggcaaaatc agcggcgaac
    21481 acggtttgat gtttaccgca tactgccgca cgctgcacaa tatcgaagcg caattattga
    21541 gtatgttcgg cgatacggac ggcaaaaccg acctgctgct ccgacacctc tccgccgccg
    21601 tttcgggcgg atactactac gcgccgtctg tcgaacgcct gcaaaacctc taagccggac
    21661 gatgccgtct gaaaccattt ttcagacggc atttt
//
LOCUS       DAWGKF010000016        21695 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.016, whole genome shotgun sequence.
ACCESSION   DAWGKF010000016 DAWGKF010000000
VERSION     DAWGKF010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21695)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21695)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21695
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.016"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(70..1311)
                     /gene="odhB"
                     /locus_tag="WHR07_000432"
     CDS             complement(70..1311)
                     /gene="odhB"
                     /locus_tag="WHR07_000432"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HEZ2129688.1"
                     /translation="MIIDVKVPMLSESVSEGTLLEWKKKVGEAVARDEILIDIETDKV
                     VLEVPSPQAGVLVEIVAQDGETVVADQVLARIDTAATAAAEAPAAATAAAEAPAAATA
                     AAEAPAAAPAEAAPAAAPAAAQNNAAMPAAAKLAAESGVDVNALQGSGRDGRVLKEDV
                     QNAAAKPAAAAAPAVALPAGARPEERVPMSRLRARVAERLLASQQENAILTTFNEVNM
                     KPIMDLRAKYKEKFEKEHGVKLGFMSFFVKAAVAALKKYPVVNASVDGKDIVYHGYFD
                     IGIAIGSPRGLVVPILRDADQMSIADIEQAIVDYAKKAKDGKIAIEDLTGGTFSITNG
                     GTFGSMMSTPIINPPQSAILGMHATKERAVVENGQVVVRPMMYLALSYDHRIIDGREA
                     VLTLVAIKDALEDPARLLLDL"
     gene            complement(1411..4239)
                     /locus_tag="WHR07_000433"
     CDS             complement(1411..4239)
                     /locus_tag="WHR07_000433"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HEZ2129689.1"
                     /translation="MMDEKLNFSYLFGSNAPYIEELYEAFLENPDAVDEKWKQYFTDL
                     SKQPGTVAVDVAHTPIRESFVTLAKKKIASAVAGGADEAMLKKQVSVLRLISAYRIQG
                     VGAAQLDPLKRIPPRDIEALDPKFHGLSDADMALQFNMGEGDFANRGKLPLSQIISNL
                     KQTYCGHIALEYIYIPNTEERRWVRNYFESVLSTPHYNADQKRRILKEMTAAETLERY
                     LHTKYVGQKRFGVEGGESAIAGLNYLIQNAGKDGVEEVIIGMAHRGRLNVLVNILGKK
                     PGDLFAEFEGRAEIKLPSGDVKYHMGFSSDIATPHGPMHVSLAFNPSHLEIVNPVVEG
                     SARAKQKRLGENGRDKVLPVLIHGDSAFIGLGVNQATFNLSKTRGYTTGGTVHIVINN
                     QIGFTTSDIRDTRSTVHCTDIAKMVSAPVIHVNGDDPERVCFAIQAALDYRKKFHKDI
                     VIDVVCYRKWGHNEGDDPTLTQPMMYKKVSQHPGARALYTEQLIAEGVVTQAEADGYI
                     QAYRDALDKGEHVEQTTLSNFQRTQIDWSKYQGKDWREHIETDLPAADIERLTEKFTA
                     VPEGFALHPTAKRVIEARKAMASGKQAIDWGMAETLAYASLVTKGHGVRISGEDSGRG
                     TFSHRHAVLHDQKREKWDDGTYVPLRHMGEGMGEFLVIDSILNEEAVMAFEYGFACSA
                     PDKLTIWEAQFGDFANGAQVTIDQFLSSGETKWGRLCGLTTILPHGYDGQGPEHSSAR
                     VERWLQLCSENNMQVIMPSEASQMFHLLQRQVLGSYRKPLVIFMSKRLLRFKGAMSPL
                     ENFTEGSTFRPVIGDTAERASNDSVKRVALCAGQVYYDLEAGRAERKLEDDVAIVRVE
                     QLYPFPYDEVKAELAKYPNAKSVVWAQEEPKNQGAFYQIRHRIEDVISEEQKLSYAGR
                     PSSASPAVGYSSKHIAQLKQLVEDALAL"
     gene            complement(4444..5727)
                     /gene="gltA"
                     /locus_tag="WHR07_000434"
     CDS             complement(4444..5727)
                     /gene="gltA"
                     /locus_tag="WHR07_000434"
                     /EC_number="2.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HEZ2129690.1"
                     /translation="MSKSIKLNVPGQAGLELPVLEASIGHDVVDIRGLTKNTGLFSFD
                     PGFVSTASCESKITYIDGDQGLLYYRGYPIEQLAEKSDYLEVCYLLIYGELPTPEQKA
                     EFDNTVRRHTMVHEQLTWFFRGFRRDAHPMAMMVGVVGALSAFYQDSLDISNPEHRKI
                     AIYRLISKIPTIAAMCYRYSNGLPFNYPKNNLSYSENFLHMMFATPCEDYKPNPVLAR
                     ALDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGIACLWGASHGGANEAVLKML
                     DEIGDVSNVAAYMEGVKQRKYRLMGFGHRVYRNMDPRASIMRETCYEVLKELGLEDSP
                     KFKLAMELEQIALKDPFFIERKLYPNVDFYSGIVLSALGIPTEMFTVIFALSRSVGWI
                     SHWHEMISDPSLKIGRPRQLYTGSERRDYVPPGER"
     gene            complement(5839..6087)
                     /locus_tag="WHR07_000435"
     CDS             complement(5839..6087)
                     /locus_tag="WHR07_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HEZ2129691.1"
                     /translation="MMVFDDIAKRKIRFQTRRGLLELDLIFGRFMEKEFEHLSDKELS
                     EFSEILEFQDQELLALINGHSETDKGHLIPMLEKIRRA"
     gene            complement(6091..6798)
                     /locus_tag="WHR07_000436"
     CDS             complement(6091..6798)
                     /locus_tag="WHR07_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HEZ2129692.1"
                     /translation="MEKMSFEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA
                     QDDTLSFRRSCREGICGSDGMNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIV
                     DMTQFFKQYHSVKPYVVNDNPIDADKERLQTQEERKELDGLYECILCACCSTACPSFW
                     WNPDKFVGPSGLLNAYRFIADSRDTITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLN
                     PTRAIGKIKEIMLKRAV"
     gene            complement(6919..8682)
                     /gene="sdhA"
                     /locus_tag="WHR07_000437"
     CDS             complement(6919..8682)
                     /gene="sdhA"
                     /locus_tag="WHR07_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HEZ2129693.1"
                     /translation="MGFPVRKFDAVIVGGGGAGLRAALQLSKSGLNCAVLSKVFPTRS
                     HTVAAQGGISASLGNVQEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHM
                     GMPFDRVESGKIYQRPFGGHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQF
                     FVEWTAQDLIRDENGDVVGVTAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMN
                     TGDGLGICARAGIPLEDMEFWQFHPTGVAGAGVLITEGVRGEGGILLNADGERFMERY
                     APTVKDLASRDVVSRAMAMEIYEGRGCGKNKDHVLLKIDHIGAEKIMEKLPGIREISI
                     QFAGIDPIKDPIPVVPTTHYMMGGIPTNYHGEVVVPQGDEYEVPVKGLYAAGECACAS
                     VHGANRLGTNSLLDLVVFGKAAGDSMIKFIKEQSDWKPLPANAGELTRQRIERLDSQT
                     DGENVDALRRELQRSVQLHAGVFRTDEILSKGVREVMAIAERVKRTEIKDKSKVWNTA
                     RIEALELDNLIEVAKATLVSAEARKESRGAHASDDHPERDDENWMKHTLYHSDTNTLS
                     YKPVHTKPLSVEYIKPAKRVY"
     gene            complement(8685..9026)
                     /gene="sdhD"
                     /locus_tag="WHR07_000438"
     CDS             complement(8685..9026)
                     /gene="sdhD"
                     /locus_tag="WHR07_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HEZ2129694.1"
                     /translation="MVERKLTGAHYGLRDWAMQRATAVIMLIYTVALLVVLFSLPKEY
                     SAWQAFFSQTWVKVFTQVSFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVG
                     CLVYSIKVIWG"
     gene            complement(9020..9397)
                     /gene="sdhC"
                     /locus_tag="WHR07_000439"
     CDS             complement(9020..9397)
                     /gene="sdhC"
                     /locus_tag="WHR07_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HEZ2129695.1"
                     /translation="MSAKPRPVYLDLPNIRLPIPGIVSILHRISGVGLFIMLPFLLYF
                     LSGTLSQESAFETYRAIVSHPLVKLVLIGVLWAYLHHSLAGIRFLFLDAHKGLELNTA
                     RNTAKAVFASALVLTVVLGALLW"
     gene            complement(9676..11079)
                     /locus_tag="WHR07_000440"
     CDS             complement(9676..11079)
                     /locus_tag="WHR07_000440"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEZ2129696.1"
                     /translation="MKKIQADVVVIGGGTAGMGAFRNARLHSDNVYLIENNVFGTTCA
                     RVGCMPSKLLIAAAEARHHALHTDPFGVHLDKDSIVVNGEEVMQRVKSERDRFVGFVV
                     ADVEEWPADKRIMGSAKFIDEHTVQIDEHTQITAKSFVIATGSRPVILPQWQSLGNRL
                     IINDDVFSWDTLPKRVAVFGPGVIGLELGQALHRLGVKVEIFGLGGIIGGISDPVVSD
                     EAKAVFGEELKLHLDAKTEVKLDADGNVEVHWEQDGEKGVFVAEYMLAAVGRRPNVDN
                     IGLENINIEKDARGVPVADPLTMQTSIPHIFIAGDASNQLPLLHEAADQGKIAGDNAG
                     RYPNIGGGLRRSTIGVVFTSPQIGFVGLKYAQVAAQYQADEFVIGEVSFKNQGRSRVM
                     LVNKGHMRLYAEKATGRFIGAEIVGPAAEHLAHLLAWAHQMKMTVPQMLDMPFYHPVI
                     EEGLRTALRDADAKLKA"
     gene            complement(11328..12065)
                     /locus_tag="WHR07_000441"
     CDS             complement(11328..12065)
                     /locus_tag="WHR07_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HEZ2129697.1"
                     /translation="MALQDRTGQKVPSVVFRTRVGDTWKDVSTDDLFKGKKVVVFSLP
                     GAFTPTCSSSHLPRYNELFGAFKENGVDAIYCVSVNDTFVMNAWAAEEESDNIYMIPD
                     GNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVNDGVVEKMFIEPEEPGDPFKVSDADTM
                     LKFVAPDWKAQESVAIFTKPGCQFCAKAKQALQDKGLSYEEIVLGKDATVTSVRAITG
                     KMTAPQVFIGGKYIGGSEDLEAYLAKN"
     gene            complement(12168..12332)
                     /locus_tag="WHR07_000442"
     CDS             complement(12168..12332)
                     /locus_tag="WHR07_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009345861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129698.1"
                     /translation="MNKYRLKAFQTVFCPDLRRKGAVAGKSFHCSLFFSNSALYVGNR
                     QIGVVFDSFK"
     gene            complement(12344..14620)
                     /gene="metE"
                     /locus_tag="WHR07_000443"
     CDS             complement(12344..14620)
                     /gene="metE"
                     /locus_tag="WHR07_000443"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEZ2129699.1"
                     /translation="MTTLHFSGFPRVGAFRELKFAQEKYWRKEISEQELLAVAKDLRE
                     KNWKHQAAANADFVAVGDFTFYDHILDLQVATGAIPARFGFDSQNLSLEQFFQLARGN
                     KDQFAIEMTKWFDTNYHYLVPEFHADTEFKANAKHYVQQLQEAQALGLKAKPTVVGPL
                     TFLWVGKEKGTVEFNRLSLLQKLLPVYVEILNALVEAGAEWIQIDEPALTVDLPKEWV
                     EAYKDVYATLSKVSAKILLSTYFGSVAEHAALLKSLPVDGLHIDLVRAPEQLDAFADY
                     DKVLSAGIIDGRNIWRANLNKVLETVEPLQAKLGDRLWISSSCSLLHTPFDLSVEEKL
                     KANKPDLYSWLAFTLQKTQELRVLKAALNEGRDSVAEELAASQAAADSRANSSEIHRA
                     DVAKRLADLPANADQRKSPFADRIKAQQAWLNLPLLPTTNIGSFPQTTEIRQARAAFK
                     KGELSAADYEAAMKKEIALVVEEQEKLDLDVLVHGEAERNDMVEYFGELLSGFAFTQY
                     GWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFV
                     RNDIPRSTVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAG
                     ESFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAFGEF
                     KYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLE
                     QLQVMMNVTHKLRAELAK"
     gene            complement(14758..15636)
                     /gene="metF"
                     /locus_tag="WHR07_000444"
     CDS             complement(14758..15636)
                     /gene="metF"
                     /locus_tag="WHR07_000444"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HEZ2129700.1"
                     /translation="MNYAKEINALNNSLSDLKGDINVSFEFFPPKNEQMETMLWDSIH
                     RLQTLHPKFVSVTYGANSGERDRTHGIVKRIKQETGLEAAPHLTGIDASPDELRQIAK
                     DYWDSGIRRIVALRGDEPPGYEKKPFYAEDLVKLLRSVADFDISVAAYPEVHPEAKSA
                     QADLINLKRKIDAGANHVITQFFFDVERYLRFRDRCVMLGIDVEIVPGILPVTNFKQL
                     GKMAQVTNVKIPSWLSQMYEGLDDDQGTRNLVAASIAIDMVKVLSREGVKDFHFYTLN
                     RSELTYAICHILGVRP"
     gene            15836..16111
                     /locus_tag="WHR07_000445"
     CDS             15836..16111
                     /locus_tag="WHR07_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HEZ2129701.1"
                     /translation="MKPNIHPDNYRTVLFFDSSANEGWLIRSCAETHGKTMVWTDGKE
                     YPLFSLDTSSASHPVYTGKQRNVNTEGRASKFNQRFQSVMSSFRKDK"
     gene            16111..16236
                     /gene="ykgO"
                     /locus_tag="WHR07_000446"
     CDS             16111..16236
                     /gene="ykgO"
                     /locus_tag="WHR07_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HEZ2129702.1"
                     /translation="MQVLSSLKTAKQRHRDCQIVRRRGKVYVICKSNPRFKARQR"
     gene            complement(16342..16542)
                     /locus_tag="WHR07_000447"
     CDS             complement(16342..16542)
                     /locus_tag="WHR07_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129703.1"
                     /translation="MIGRLFRIFFFFALAALIMNRLFSRRQKRALREVAEISARVLLG
                     AAAATLFWYLFMLYFKHIPDSY"
     gene            16685..17824
                     /locus_tag="WHR07_000448"
     CDS             16685..17824
                     /locus_tag="WHR07_000448"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HEZ2129704.1"
                     /translation="MSQNASVGIVTPQKIPFEMPLVLENGKTLPRFDLMIETYGELNA
                     EKNNAVLICHALSGNHHVAGRHSAEDKYTGWWDNMVGPGKPIDTERFFVVGLNNLGGC
                     DGSSGPLSINPETGREYGADFPVVTVKDWVKSQAALADYLGIGQWAAVVGGSLGGMQA
                     LQWAISYPERVRHALVIASAPKLSTQNIAFNDVARQAILTDPDFNEGHYRSHNTVPAR
                     GLRIARMMGHITYLAEDGLGKKFGRDLRSNGYQYGYGVEFEVESYLRYQGDKFVGRFD
                     ANTYLLMTKALDYFDPAADFGNSLTRAVQDVQAKFFVASFSTDWRFAPERSHELVKAL
                     IAAQKSVQYIEVKSAHGHDAFLMEDEAYMRAVAAYMNNVYKECQQ"
     gene            17821..18402
                     /gene="metW"
                     /locus_tag="WHR07_000449"
     CDS             17821..18402
                     /gene="metW"
                     /locus_tag="WHR07_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HEZ2129705.1"
                     /translation="MNLRDDLQLIYDRIPEGSRVLDLGCGDGELLAALVEHKKCSGYG
                     IEIDTDSVIAAMSRGVNVIQADLEEGLTAFNDQSFDVIVLSQTIQAMQNTEKILRCLM
                     RVAKQAIVSFPNFGYWRNRVQIALGGHMPVSERMPYHWYDTPNIHWCTLKDFDLLCAK
                     NNIRVLERAVMTGNRQVKHFPNLLGSLAFYRVG"
     gene            18519..19364
                     /locus_tag="WHR07_000450"
     CDS             18519..19364
                     /locus_tag="WHR07_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="d-alanine-poly(phosphoribitol) ligase"
                     /protein_id="HEZ2129706.1"
                     /translation="MKNKTSSLLLWLAAMMLTACSPSKEDKTKENGASAASSTASAAS
                     SSAPQTDLQPAASAPDNVKQAESVPPSNCTDLHPATGIDDLMQQIAEHIDSDCLFALS
                     HHELETRFGLPGGGYDNIQRLLFPDIRPEDPDYHQKIILAIEDLRYGKRTISRQAQDA
                     LMEQERRLREATLLLIQGSQETRGQGEEPKRTRYFEVSATPAYSSRHNNGLGGNFQYI
                     GQLPGYLKIHGEMLENQSLFRLSNRERNPDKPFLDIHFDENGKITRIVVYEKNIYFNP
                     NLGRR"
     gene            complement(19414..19974)
                     /gene="efp"
                     /locus_tag="WHR07_000451"
     CDS             complement(19414..19974)
                     /gene="efp"
                     /locus_tag="WHR07_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEZ2129707.1"
                     /translation="MKTAQELRAGNVFMVGNDPMVVQKTEYIKGGRSSAKVSMKLKNL
                     LTGAASETIYKADDKFDVVILSRKNCTYSYFADPMYVFMDEEFNQYEIEADNIGDALK
                     FIVDGMEDQCEVTFYEGNPISVELPTIIVREVEYTEPAVKGDTSGKVMKTARLVGGTE
                     IQVMSYIENGDKIEIDTRTGEFRKRA"
     gene            complement(20017..21165)
                     /gene="earP"
                     /locus_tag="WHR07_000452"
     CDS             complement(20017..21165)
                     /gene="earP"
                     /locus_tag="WHR07_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P maturation arginine
                     rhamnosyltransferase EarP"
                     /protein_id="HEZ2129708.1"
                     /translation="MNTPPFVCWIFCKVIDNFGDIGVSWRLARVLHRELGWQVHLWTD
                     DVSALRALCPDLPDVPCVHQDIHVRTWHSDAADIDTAPVPDVVIETFACDLPENVLHI
                     IRRHKPLWLNWEYLSAEESNERLHLMPSPQEGVQKYFWFMGFSEKSGGLIRERDYCEA
                     VRFDSEALRQRLMLPEKNAPEWLLFGYRSDVWAKWLEMWRQAGSPMTLLLAGTQIIDS
                     LKQSGVIPQDALQNDGDVFQTASVRLVKIPFVPQQDFDKLLHLADCAVIRGEDSFVRA
                     QLAGKPFFWHIYPQDENVHLDKLHAFWDKAHGFYTPETVSAHRRLSDDLNGGGALSAT
                     QRLECWQILQQHQNGWRQGAEDWSRYLFGQPSASEKLAAFVSKHQKIR"
     gene            complement(21184..21462)
                     /locus_tag="WHR07_000453"
     CDS             complement(21184..21462)
                     /locus_tag="WHR07_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129709.1"
                     /translation="MSRNLLVRWLVVCLIPLATLAVFVANPPEDKPQHLINGIILACE
                     ATFLFKFVLFDTIKHHLKQEFDLKRQTMLLFIPIVLLVVYLFHYFGAF"
BASE COUNT         5350 a         5498 c         5492 g         5355 t
ORIGIN      
        1 tttaaattta atccactata aaaattcaga cggccttttc attaacaaat aaaaggccgt
       61 ctgaaacgat tacagatcca acaacaggcg ggctgggtct tccaacgcgt ctttaatggc
      121 taccaaggtc aatacagctt cgcggccgtc aatgatacgg tggtcgtaag acagagccag
      181 atacatcatt ggacggacaa caacttggcc gttttcaacc acagcgcgct ctttagtggc
      241 gtgcataccc aaaatcgcag attgaggcgg attgatgatc ggggtggaca tcatagaacc
      301 gaaagtaccg ccgttggtaa tactgaatgt accgccggtc agatcttcga tagcgatttt
      361 gccgtctttg gcttttttcg cgtaatcaac aattgcttgt tcgatgtcgg caatgctcat
      421 ttggtcggca tcgcgcagga ttggcacaac caaaccgcgt gggctgccaa tcgcgatacc
      481 gatgtcgaag tagccgtggt acacaatgtc tttgccgtca acagaagcat tcacaaccgg
      541 gtattttttc agggctgcaa cagcggcttt aacgaagaag gacataaagc ccagtttcac
      601 gccgtgttct ttctcgaatt tttctttgta cttcgcacgc aagtccatga ttggtttcat
      661 gttgacttcg ttgaatgtag tcagaatggc gttttcttgt tgagaagcca agaggcgttc
      721 tgcaacacgg gcacgcaggc ggctcatcgg tacgcgttct tcaggacgtg cgccggcagg
      781 aagtgcaacg gcaggagcag cggctgcggc aggtttggct gcggcatttt gtacgtcttc
      841 tttcaatacg cgaccgtcac ggccggaacc ttgcaatgcg ttcacgtcaa caccgctctc
      901 tgcagccagt ttggcggcgg caggcatagc ggcgttgttt tgtgcagcag caggagcggc
      961 ggccggggca gcttcggcag gagcggcggc aggtgcttca gcagcggcag tagcagcggc
     1021 aggtgcttca gcagcggcag tagcagcggc aggtgcttca gcagcggcag tagcagcggt
     1081 atcgatacgt gccaaaactt ggtcggcaac aacggtttca ccgtcttgcg ctacgatttc
     1141 aaccaatacg ccggcttgtg gagaaggtac ttccaaaacc actttgtccg tttcgatatc
     1201 gatcaggatt tcgtcacggg caactgcttc gccaactttt ttcttccatt ccaagagcgt
     1261 gccttcagat acgctttcag acagcatagg tacttttaca tcaataatca ttttgtgtct
     1321 ccaatggccc tttcagacgg cctgttgtgt gtttttcatt ctgcatatgg gtgttccgcc
     1381 tgagcagcct cagacggaat gctacttggc ttacaatgcc aaagcgtctt caaccaattg
     1441 tttcaattga gcaatgtgtt tgcttgagta gcccactgca ggcgatgcgc tgcttggacg
     1501 accggcataa gacagttttt gctcttcgct gataacgtct tcgatgcggt ggcggatttg
     1561 gtagaacgcg ccttggtttt tcggctcttc ttgtgcccaa accacagatt ttgcgttcgg
     1621 atatttcgcc agttcggctt taacctcgtc gtatgggaac ggatacagct gctcaacgcg
     1681 gacaatagcg acatcatctt ccagtttacg ttcggctcga ccggcttcca agtcatagta
     1741 aacctgaccg gcacacaatg ccacgcgttt cacgctgtcg ttgcttgcgc gttcggcggt
     1801 atcgccgata accggacgga aagtcgaacc ttcggtgaag ttttccagcg ggctcattgc
     1861 ccctttgaat cgcaacaggc gtttggacat gaaaatcact agcggtttgc ggtatgaacc
     1921 taagacttga cgttgcaaga ggtggaacat ttgcgacgct tcagacggca tgatgacttg
     1981 catattgttc tcagaacaca gttgcaacca acgttctacg cgtgcagaag agtgctcggg
     2041 accttgaccg tcgtagccgt gcggaaggat ggtggtcaga ccgcacaaac gaccccattt
     2101 ggtttcgcct gaagacagga attggtcaat agtcacttgc gcgccgttgg cgaagtcacc
     2161 aaattgagct tcccaaatgg tcagcttgtc aggcgcggag caggcaaagc cgtactcgaa
     2221 cgccatcacg gcttcttcgt tcaaaatgga gtcgataacc aagaactcgc ccataccttc
     2281 gcccatatgg cgcagaggaa cataagtacc gtcatcccat ttttcacgtt tttgatcgtg
     2341 caatactgca tgacggtgtg agaatgtacc gcgcccggag tcctcaccgg agatacgcac
     2401 gccatgacct ttggttacaa ggcttgcgta tgccaaggtt tcggccatac cccagtcgat
     2461 ggcttgtttg ccggatgcca tggctttacg cgcttcaatc acacgttttg cagtcggatg
     2521 cagggcaaag ccttccggta cggcggtaaa tttctcggta agacgctcaa tatccgcggc
     2581 aggcaaatcg gtttcgatgt gttcgcgcca atctttacct tggtatttgc tccagtcaat
     2641 ttgtgtgcgt tggaagttgc tcaacgttgt ttgctcgacg tgttcgcctt tatccaaagc
     2701 atcacggtag gcttggatgt aaccgtcagc ctcggcttgg gttaccacgc cttcggcaat
     2761 cagttgctcg gtgtacaaag cacgcgcacc cgggtgttgc gatacttttt tgtacatcat
     2821 cggttgggtc aaggtcggat cgtcgccctc gttgtggccc catttacggt agcagacaac
     2881 gtcgatcacg atgtctttat ggaatttttt gcggtaatcc aaagcggctt ggatggcaaa
     2941 gcaaacacgc tcaggatcat cgccgttcac atggataacc ggagcggaaa ccatttttgc
     3001 gatatcggta cagtgtacgg ttgaacgggt atcgcggata tcggaagtgg taaagccgat
     3061 ttgattgttg atgacgatat gaaccgtacc gccggtggta taaccgcgcg ttttagacag
     3121 attgaatgtc gcttggttga cacccaaacc gataaatgcg gagtcgccgt gaatcaatac
     3181 gggcaagact ttatcgcggc cgttttcgcc caaacgtttc tgcttggcgc gtgcagaacc
     3241 ttcgactacc gggttaacga tttccaagtg tgacgggttg aacgccaaag aaacgtgcat
     3301 cggaccatgt ggagtggcga tgtcggagct gaagcccatg tggtatttca cgtcgccgct
     3361 aggcaatttg atttcggcac ggccttcaaa ctcagcgaac aaatctccgg gttttttacc
     3421 caaaatgttc accaaaacat tcagacggcc acggtgcgcc ataccgatga tgacttcttc
     3481 cacgccgtct ttaccggcgt tttgaatcag gtagttcaaa ccggcaatcg cgctttcgcc
     3541 gccttcgaca ccgaaacgtt tctgaccgac atatttggta tgcagataac gttccaaagt
     3601 ctcggcagca gtcatctctt tcaagatacg gcgtttttga tcggcattgt aatgcggtgt
     3661 ggacaatacg ctttcaaaat aattgcgtac ccagcggcgc tcttcggtat tgggaatata
     3721 gatatattcc aatgcgatgt ggccgcagta ggtttgtttg aggttgctga tgatttggga
     3781 caaaggcagt ttgccgcgat tggcaaaatc gccctcgccc atattgaatt gaagcgccat
     3841 atcggcatct gacagaccgt ggaatttcgg atcgagggct tcaatatcgc gcggggggat
     3901 acgtttgagc ggatcaagtt gggctgcacc cacgccttgg atacgatagg cggaaatcag
     3961 ccgtaaaacg ctgacttgct ttttcagcat tgcctcatcc gcaccgcccg caacggcaga
     4021 tgcaattttc tttttcgcca aagtaacaaa tgattcgcga atcggtgtgt gtgcgacatc
     4081 gacagcaacc gtccccggct gtttgctcaa atcggtgaaa tactgcttcc atttttcatc
     4141 aaccgcatcg gggttttcca aaaaagcctc gtacaattcc tcaatgtaag gtgcgtttga
     4201 accgaacagg taagagaaat tgagtttttc gtccatcatg gcgtgcgctc ttttctttaa
     4261 aatataaaca aagggtagaa gtccgcgtcc tgacggctaa actgatgccg cctgaaaaga
     4321 cattttattc taccctattt taaaccggat tgcttgtatt gatttcatcc gactacaatc
     4381 agacggattc gggaaacaat ccggttctct gatattgcct gtttgacaat atattaatgt
     4441 atgttacctc tcgcctggcg gcacataatc gcggcgttcc gaaccggtat aaagctggcg
     4501 cgggcggccg attttcagcg aaggatcgct aatcatctcg tgccagtgcg aaatccagcc
     4561 cacgctgcgc gacagggcga agatgacggt aaacatttcg gtcgggatgc ccagcgcgga
     4621 caggacgatg ccggaataga aatcgacgtt tggatacagt ttgcgttcga taaagaacgg
     4681 gtctttcagc gcaatctgtt ccaattccat cgccagtttg aatttcggac tgtcttccaa
     4741 gcccaattcc ttcaaaactt catagcaggt ttcacgcata atgctggcac gcggatccat
     4801 attgcggtac acgcggtgac cgaagcccat cagacggtat ttgcgttgtt tcacaccttc
     4861 catgtatgcg gcaacattag acacatcgcc gatttcgtcc aacattttca acacggcttc
     4921 gttcgcaccg ccgtgcgaag caccccacag gcaggcgata ccggcagcaa tacaggcaaa
     4981 cgggttcgca cccgaagacc ctgccagacg gacggttgaa gttgaggcgt tttgctcgtg
     5041 gtcggcatgc aaaataaaga tgcggtcgag cgcgcgtgcc aaaacgggat tgggtttgta
     5101 gtcttcacac ggcgtggcga acatcatatg aaggaagttt tcggaataag aaagattatt
     5161 cttcggataa ttgaacggca gaccgtttga atagcggtag cacattgccg caatggtcgg
     5221 gattttagaa atcaggcggt aaatcgcgat tttgcggtgt tcgggattgc taatgtccaa
     5281 gctgtcttgg tagaacgcag acagtgcgcc gaccacgccg accatcatcg ccatcggatg
     5341 cgcgtcgcgg cggaaccccc ggaagaacca agtcagctgt tcatgcacca tcgtgtggcg
     5401 gcggacggta ttgtcaaatt ctgccttttg ctcgggagtc ggcagttcgc cgtaaatcaa
     5461 caggtagcag acttccaaat aatcggactt ttcggccagc tgctcgatgg ggtatccgcg
     5521 ataataaagc aagccttgat cgccgtcgat gtaagtaatt ttagactcac agcttgcggt
     5581 tgaaacaaat ccggggtcga aggaaaacaa acctgtattt tttgtcagcc cccgaatgtc
     5641 aaccacatcg tgcccgatgc tggcttccaa taccggcagc tccaaacctg cctgacccgg
     5701 tacgttgagt ttgattgatt tggacatatt attgctcctt tgcaagttat aacccacgtt
     5761 actgcatccg cagcacgttc tttgccttca gacggctttt gcattttgaa atctgcctgc
     5821 aggcagattt cagatgcctc atgcccgtct gattttttca agcatcggga taaggtgccc
     5881 tttgtccgtt tccgaatgcc cgttaatcaa ggcaagcaat tcttgatctt gaaattcaag
     5941 gatttcggaa aactcggaca gctctttatc gctcaaatgc tcgaattctt tttccataaa
     6001 cctgccgaag attaaatcta attccaacaa tccccggcgg gtttgaaaac ggattttccg
     6061 tttggcaata tcgtcaaaaa ccatcatttc ttaaacggcc cgtttcaaca taatctcttt
     6121 aatcttaccg atggctcggg tcggattcaa gtgtttagga catacgtcta cgcagttcat
     6181 aatggtgtgg caacggaaca aacggtatgg gtcgttcaga ttatccaaac gctcattagt
     6241 gatggtatca cggctgtccg caatgaaacg gtaagcattc agcaaaccgg acggaccaac
     6301 gaatttatca gggttccacc aaaatgacgg gcaggcagtc gaacagcagg cgcacaaaat
     6361 acactcgtac aaaccgtcca actctttacg ctcttcctga gtttgcagac gctctttgtc
     6421 cgcatcaatc ggattatcgt tgacaacata aggtttgacg gaatggtatt gtttgaagaa
     6481 ctgggtcata tccacaatca ggtcgcggat aacaggcaga cctggcagag gacggatttt
     6541 aaccggctgt ttcaagccac gcagatcggt caaacacgcc aagccgtttt tgccgttgat
     6601 gttcataccg tccgatccgc aaatgccttc gcggcaggag cggcggaaag acaaggtatc
     6661 gtcttgtgct ttcaggcgta ccaaagcatc caaaagtttc acgtcggtcg gttccaattc
     6721 caactcgtaa cgctgcatat aaggcttggc atcaacatcc gggttgtaac ggtaaatttc
     6781 aaaactcatt ttttccatga gaagtgttcc ttttctcatc aactgcccaa tgattttgta
     6841 ttataaattc aagcagttca atgtgggtat ggttagattt cagacgagct tatgaggcga
     6901 agaccgtctg aaaacgcatc aataaacgcg cttggccggt ttgatgtatt ccacgctcaa
     6961 aggcttggta tgtaccggtt tgtaagacaa agtattggta tctgaatggt acagcgtatg
     7021 tttcatccag ttttcatcat cgcgctcagg atggtcgtct gaagcgtgcg caccgcgtga
     7081 ttctttacgt gcttcggcag acaccaaagt cgctttcgcc acttcaatta ggttatccaa
     7141 ttccaaagcc tcgatacgcg cggtattcca cactttgctc ttgtctttga tttcggtacg
     7201 tttcacacgc tcggcaatcg ccatgacttc tcgaacgcct ttgctcagaa tctcatcagt
     7261 acggaacacg ccggcgtgca attgtacgga gcgttgcagt tcgcggcgca atgcatcaac
     7321 gttttcacca tcggtttggc tgtccaaacg ctcgatacgt tggcgggtca actcaccagc
     7381 attagcaggc aaaggtttcc agtcgctttg ctctttgatg aatttaatca tgctgtcgcc
     7441 ggcagcttta ccgaatacca ccaagtccaa cagggagttg gtacccaagc ggttcgcacc
     7501 gtgtacggaa gcacaagcgc actcacctgc cgcatacaga ccttttacag gcacttcgta
     7561 ttcgtcgcct tgaggaacga caacttcgcc atggtagttg gtcggaatac cgcccatcat
     7621 atagtgggta gtcggcacaa cgggaatcgg gtctttaatc ggatcgatac cggcgaactg
     7681 aatggaaatc tcgcggatgc ccggcagttt ttccataatt ttttctgcgc cgatatggtc
     7741 gattttcagt aagacatggt ctttgttttt accgcagccg cgaccttcgt agatttccat
     7801 cgccatcgcg cgggaaacaa cgtcgcgaga agccaagtct tttacggtcg gcgcatagcg
     7861 ttccataaag cgttcgccgt cggcattcaa cagaataccg ccctcgccgc gtacgccttc
     7921 ggtaatcaac acgcccgcac ctgccacgcc ggtcgggtgg aattgccaga attccatatc
     7981 ttccaacgga atacccgcac gcgcgcaaat gcccaaacca tcgccggtat tcatataggc
     8041 attggtagaa gaagcataaa tacgaccgcc accgccggta gcaaacatca cagctttagc
     8101 gtggaaaata taaacttcgc cggtttccat ttccatggcg gttacgccga cgacatcgcc
     8161 gttttcatca cgaatcaaat cttgtgccgt ccattccaca aagaattgcg tattggcacg
     8221 gacgttttgt tggtacaaag tatgcagcat cgcatgacct gtacggtcgg caaccgcaca
     8281 ggcgcgttct accgcgcgtt taccgtgttc ggcagtatgg ccgccgaaag gacgctgata
     8341 aattttaccg ctttccacac ggtcaaaagg catacccatg tgttccaact caattacggc
     8401 ttcaggcgcg gcgcggcaca taaactcaat cgcatcttgg tcgcccaacc agtcggaacc
     8461 tttcacggta tcgtacatgt gccagtccca acggtcttcc tgcacattac ccagagaggc
     8521 ggaaataccg ccctgcgccg ctacggtatg cgaacgggtc gggaacactt tagacaaaac
     8581 ggcacaattc agaccggatt tggataattg gagggctgcg cgtaaacctg caccaccacc
     8641 gccgacaatc acggcatcaa acttgcgaac aggaaaaccc atacttaccc ccaaattact
     8701 ttaattgaat acaccaagca gccgaccagc cagacgatgg tggcaacctg caaaaacaaa
     8761 cgcacgccga agggtttgat atagtccatc cacaaatcgc ggatacccac ccaagcgtgc
     8821 aagaatacgg cgatgaagct cacttgggta aatactttta cccaagtttg actaaaaaat
     8881 gcctgccatg ccgaatattc tttaggcagg gaaaatagaa ccactaaaag tgcaacggta
     8941 taaatcaaca taataaccgc agtcgcacgt tgcatcgccc aatcgcgcaa accgtaatgg
     9001 gcaccggtca atttacgttc taccataaca acgctcccaa aacgacagtc aaaaccaatg
     9061 cagaagcaaa tacggcttta gcggtattgc gcgcagtatt cagctcaagg cctttgtgcg
     9121 catccaaaaa taaaaagcgg ataccggcga gagaatggtg cagataagcc cacaatacac
     9181 cgattaaaac cagcttgacc aaaggatggg aaacaatggc acggtaagtt tcaaatgcag
     9241 actcttgact cagggtaccg gacaggaaat acagcaggaa aggcagcata ataaacagcc
     9301 cgaccccgct gatgcggtga aggatggaaa ctatcccggg tatcggcaga cggatgttcg
     9361 gcaaatccag ataaacagga cgcggtttgg cagacatagt caattcctct gtagttatat
     9421 atcgactcaa aaaccgtaaa cccattgcta cactgggtta cataaacgtt aatttacctg
     9481 ttttatccca ttttgaacag tgtattttaa aaacaaactg atagattttg acaaacacgc
     9541 gtggaaacag cagattaaaa gaaagatttt tagttttgcc gcccccttcc cgacacggta
     9601 tcagcatccg accccatccc caaaaacaaa atgccgtctg aaaaaatttc agacggcatt
     9661 gttttgccat atcggtcagg ctttcaattt cgcatcggca tcgcgcaacg cggtacgcag
     9721 accttcctcg ataacgggat ggtagaacgg catatccagc atttgcggaa cggtcatctt
     9781 catttgatgc gcccatgcca gcaagtgcgc caaatgttcg gcggcagggc ctacgatttc
     9841 cgcgccgata aagcggccgg tggctttttc ggcatacagg cgcatatggc ctttgttcac
     9901 cagcatcacg cggctgcggc cttggttttt gaacgatact tcgccgatga caaattcgtc
     9961 ggcttggtat tgcgcggcaa cctgcgcgta tttcagaccg acaaagccga tttgcggact
    10021 ggtaaacacc acgccgatgg tgctgcgccg caaaccgccg ccgatattcg ggtagcggcc
    10081 cgcgttatcg ccggcaatct tgccttggtc ggcagcttca tgcagcagag gcagttggtt
    10141 ggacgcgtcg cccgcaataa agatatgcgg aatgctggtc tgcatggtca gtgggtcggc
    10201 aacgggtacg ccgcgcgcgt ctttttcgat attgatgttt tccaaaccga tattgtcaac
    10261 gttcggacgg cggcccacgg ctgccagcat atattcggca acaaatacgc ctttttcgcc
    10321 gtcctgctcc caatggactt ctacattgcc gtctgcatct agtttgacct cggttttagc
    10381 atccagatgc agtttcaatt cttcgccgaa cacggctttc gcctcgtctg aaacgacggg
    10441 gtcggaaatg ccgccgatga ttccgcccaa accgaaaatt tcaactttca cgcccaaacg
    10501 gtgcaatgcc tgacccagtt ccaaaccgat aacacccggc ccgaacacgg caacgcgctt
    10561 aggcagcgta tcccatgaga aaacgtcatc gttgataatc aaacgattgc ccaaagactg
    10621 ccattgcggc aggatgacgg gacgcgaacc ggtagcaatc acgaaacttt ttgccgtaat
    10681 ttgagtatgc tcgtcgattt ggacggtatg ctcgtcgata aatttagccg aacccatgat
    10741 gcgcttgtcg gcaggccact cttccacatc ggcaacgaca aagccgacaa aacggtcacg
    10801 ctcggattta acgcgctgca tgacctcttc accgttgacg acgatgctgt ctttgtccaa
    10861 atgcacgccg aacgggtcgg tatgcaatgc gtggtggcgc gcttctgcgg cggcaatcaa
    10921 gagtttggaa ggcatacaac ccacgcgcgc gcaggttgtg ccgaacacat tgttttcaat
    10981 caggtaaaca ttatccgaat gtaaacgggc attgcgaaac gcacccatac cggcagtacc
    11041 gccgccgatt acgacgacat ccgcttgaat ttttttcata atctttgtcc ttccgttttc
    11101 gtctgaaaca ttgccgacac agaacatatc ggtttcagac ggcatttaaa tattttccca
    11161 atcaaaaaca tcattcagat aaataaaaac aaaatttcga ttgagtgcaa caatatccaa
    11221 attctcttat aaatatagag ttattcggat cggcagtgta gaaccgcccg aataactcta
    11281 tccggtatat cagacagttt aatcaaaccg ccttaagcaa acagctatca gtttttagcc
    11341 aagtaagctt ccaaatcttc gctgccgccg atgtatttgc cgccgatgaa gacttgaggg
    11401 gcagtcatct tgccggtaat ggcgcgaacg gaagtaacgg ttgcatcttt gcccaatacg
    11461 atttcttcgt aagacaaacc tttgtcttgc aaagcttgtt tggctttggc gcagaattgg
    11521 caacctggtt tagtgaaaat tgccacagac tcttgagctt tccaatcagg agcaacgaat
    11581 ttcagcatag tatctgcatc ggatactttg aacggatcgc ctggttcttc aggctcgatg
    11641 aacatttttt caaccacgcc gtcgttaacc agcatggagt aacgccaaga gcgtttaccg
    11701 aagcccaagt cttctttacc gaccagcata cccatacctt cggtaaattc gccgttgcca
    11761 tcaggaatca tgtagatgtt gtcggattct tcttcggcag cccaagcgtt cattacgaac
    11821 gtatcgttta cagatacgca gtagattgcg tcaacgccgt tttctttgaa cgcgccgaac
    11881 aattcgttgt aacgcggcag gtgtgaagaa gaacaagtcg gggtaaatgc accgggcagg
    11941 gagaatacga ctactttttt gcctttgaac aaatcatcgg tagacacatc tttccaagtg
    12001 tcgccgacgc gggtgcggaa tactacggaa ggtacttttt gaccggtacg atcttgcaaa
    12061 gccattttaa gctccttaat agattggttt gagaaataat tgtgaatcgc tgggcattct
    12121 accccatgca aaatgatttg tataatttat agttcaaata atataaatta tttaaaacta
    12181 tcaaacacaa ctccgatttg cctgtttccc acatataaag ccgaattaga aaaaaacaag
    12241 ctgcaatgaa aagattttcc ggcaactgcg cccttgcgcc gcaaatcagg acaaaatacc
    12301 gtctgaaagg ctttcagacg gtatttattc atacggtctc ggcttatttc gccaattcgg
    12361 cacgcaattt gtgggttacg ttcatcatca cttggagttg ttccagagtt tctttccagc
    12421 cgcgtgtttt caggccgcag tccgggttaa cccacagacg ttcaaccggt acaacctcga
    12481 tggctttgcg caacaggtgc tccacttcgg cttctgtcgg tacgcgcggg ctgtggatgt
    12541 cgtaaacccc cgggccgatg tcgttcgggt atttgaattc gccgaacgcg gtcaagagtt
    12601 ccatgtcgga acgtgaagtc tcgatggtga tcacgtccgc atccattgca gcaatcgcag
    12661 gcaggatatc gttgaactcg gagtagcaca tatgagtgtg gatttgtgtg ctgtcttcgc
    12721 aaccggcaga ggacaggcgg aaggattcgc ccgcccagtt caggtaggca tcccaatcgg
    12781 cgcgtttcag cggcaagcct tcgcggatgg caggttcgtc aatttggatg actttgatgc
    12841 ctgctttttc cagatccaat acttcgtcgt tcagagccag tgcgatttgt ttgcacacgg
    12901 tagagcgagg aatatcgttg cggacgaaag accattgcag aatggttaca gggccggtca
    12961 acataccttt catcggacgt ttggtcaggc tttgagcgta agtagaccaa gcgacagtca
    13021 tggcttcagg acggcttacg tcaccgaaga taatcggtgg tttaacacaa cgtgagccgt
    13081 agctttgtac ccagccgtat tgggtgaatg caaaaccgct caacaattcg ccgaagtatt
    13141 cgaccatgtc gttacgctcg gcttcgccgt gtaccagtac gtccaaatcc agtttttctt
    13201 gttcttcaac caccaaggcg atttcttttt tcatcgcggc ttcgtaatcg gcggcagaca
    13261 gttcgccttt tttgaaggct gcgcgtgctt ggcggatttc ggtagtttgc gggaaagaac
    13321 cgatgttggt cgtcggcagc agaggcaggt tcaaccatgc ttgttgcgct ttgatacggt
    13381 cggcaaatgg agatttgcgt tggtctgcgt tggcaggcaa atcggccagg cgtttggcaa
    13441 cgtctgcacg gtggatttcg ctgctgttgg cgcgtgaatc ggcagcagct tggctggcgg
    13501 ccagttcttc ggcaacggaa tcgcgacctt cgttcaatgc ggctttcaga acgcgcaatt
    13561 cttgggtttt ttgcagggta aatgccaacc aagagtacag gtccggtttg ttggctttca
    13621 gtttttcttc aactgacaag tcaaatggag tgtgcagcag agagcaagag ctggaaatcc
    13681 acaaacggtc gcccagtttg gcttgcagag gctcaacagt ttccaaaact ttgttcaggt
    13741 tggcgcgcca gatgttgcgg ccgtcgatga tgcctgcaga cagaactttg tcgtagtcgg
    13801 caaatgcgtc cagttgctcg ggagcgcgta ccaagtcgat gtgcaggccg tcaacaggca
    13861 gggatttcaa caatgcggcg tgttcggcaa cagaaccgaa gtaagtgctc agcaggattt
    13921 tggcacttac tttgctcaaa gtagcgtaaa cgtctttgta ggcttctacc cattctttag
    13981 gcagatcgac agtcaaagca ggctcgtcga tttgaatcca ttctgcaccg gcttcaacca
    14041 aagcgtttag gatttcaacg taaacaggca gcagtttttg caacaggctc aggcggttga
    14101 attcgactgt gcctttttct ttacccaccc acaggaaagt caacggacct acaacggtcg
    14161 gtttggcttt cagaccgagg gcttgggctt cttgcagttg ttgaacatag tgtttggcat
    14221 tggctttgaa ttcggtatcg gcgtggaatt caggcaccaa gtagtggtag ttggtgtcga
    14281 accatttggt catttcgata gcgaattggt ctttgttgcc gcgcgccagt tggaagaatt
    14341 gttccaaaga caggttttgg ctgtcgaaac cgaagcgggc gggaatcgcg ccggtggcga
    14401 cttgcaggtc gaggatgtgg tcgtagaaag tgaaatcgcc tacggcaacg aaatcggcgt
    14461 tggcagcggc ctggtgtttc cagtttttct cgcgcaagtc tttagcaaca gccagcaatt
    14521 cttgctcgct gatttctttg cgccagtatt tttcttgtgc gaatttcaat tcgcggaagg
    14581 cgccgacacg cgggaagcct gagaaatgta atgttgtcat gttgaactct ccagttggat
    14641 tttgtaagga ccggttcgat ccaaatcggc cggtattgta aatcagaatg gctcggatgg
    14701 ggcggtgttt tgctttttag acaccttaga tgccgtctga aactgtttga tacggcttta
    14761 agggcgcacg cctaaaatat ggcagatggc gtaagtcagc tcgctgcggt taagcgtata
    14821 gaagtggaaa tctttcacgc cttcgcggga caggactttg accatatcga tggcgatact
    14881 tgccgccacc agattgcgcg taccttggtc gtcgtccaaa ccttcataca tttgcgacag
    14941 ccagcttggg attttgacgt tggttacttg cgccattttg ccgagctgct tgaagttggt
    15001 aacaggcaaa ataccgggga cgatttccac atcgataccc aacatcacgc agcggtcgcg
    15061 gaagcgcagg tagcgttcca catcgaagaa gaattgggtg atgacgtggt tcgcgcccgc
    15121 atcgattttg cgtttcagat tgatcaagtc ggcttgagcg gatttggctt ccgggtgtac
    15181 ctcaggatag gccgctacgg aaatgtcgaa gtcggcaacg gagcgcaaca gtttgaccaa
    15241 atcttcggca tagaaaggtt ttttctcgta gccgggcggc tcgtcgccgc gcagggcgac
    15301 aatgcggcgg atgccgctgt cccaatagtc tttggcgatt tggcgcaatt cgtcgggaga
    15361 agcgtcaata ccggtcaggt gcggggcggc ttccaagccg gtttcctgtt tgatgcgttt
    15421 gacgatgccg tgtgtgcggt cgcgctcgcc tgagtttgca ccgtaagtta cggaaacaaa
    15481 tttcgggtgc aaggtttgca ggcgatggat ggaatcccac agcatggttt ccatttgttc
    15541 gtttttcggc gggaaaaatt cgaatgaaac gttgatgtcg cctttcaaat cggaaaggct
    15601 gttatttaac gcattgattt cttttgcgta attcatggct gcgtaccttt tattatcttt
    15661 tatatgatgt ttcaggcaac ataataaagt tgcgccaaac atgagtcaat ttcaaaattt
    15721 tcagatttat catgaaaatt tctaatatat tacaaaaata gttaaatttc cttgtacagc
    15781 ccttctaaac tatgctagag tttgttatgt tataacactg aaagcaaggc aatatatgaa
    15841 accgaatatt catcccgaca attaccgaac cgtccttttt ttcgatagca gcgccaatga
    15901 aggctggtta atccgctcct gtgccgaaac acacggaaaa acgatggttt ggacagacgg
    15961 caaagaatat ccgctgtttt cgctggatac ttcttccgca tcccatcccg tctatactgg
    16021 caaacagcgc aacgtcaaca ccgaaggccg tgccagcaaa ttcaaccaac gtttccaatc
    16081 cgtaatgtca tcgtttagaa aggacaaata atgcaggttc tgtcttcact caaaaccgcc
    16141 aaacaacgcc accgcgactg ccaaatcgtc aggcgcaggg gcaaagttta cgtcatctgc
    16201 aaaagcaatc cgcgttttaa agcgcgccaa cgctgacccc ctgcccttcc tgcttcggtt
    16261 gtaaatcccc tcctaccgca agcccttttc aaaaaatgcc gtctgaaaca gaaaaatgcg
    16321 tttcagacgg cattttttcc gtcaatacga atccggaatg tgtttgaaat acagcataaa
    16381 cagataccaa aacagcgtcg cggcggccgc accgagcagc acccgggcac tgatttcggc
    16441 aacttcgcgc agggcgcgtt tctgcctgcg gctgaagagg cggttcataa tcagcgcggc
    16501 aagtgcgaaa aagaaaaaaa tacggaaaag tctgcctatc atgtcgggaa gcgaaaagta
    16561 tggttcgggc gcggcagcat ggggaaggat gtttcagcgc gtcaggctgc ttgtccgacc
    16621 gtgtcaaaaa gtcatgccgt ttgcgatata ataacgcttt ttgccgtatt tgttggaaca
    16681 ggatatgagt caaaatgcct cggtgggcat tgtaacgccc caaaaaattc cgtttgaaat
    16741 gccgctggtt ttggaaaacg gtaaaacttt gccgcgtttc gatctgatga ttgaaaccta
    16801 cggcgagctg aatgccgaaa aaaataatgc ggttttaatc tgtcatgcgc tgtcaggcaa
    16861 ccatcatgtt gcgggcaggc attcggcgga ggataaatat acgggctggt gggacaatat
    16921 ggtaggaccc ggcaaaccga ttgatacgga acgttttttc gtggtcggtt tgaacaatct
    16981 gggcggctgt gacggcagca gcggaccttt gtcgatcaat cctgaaacgg gtagggaata
    17041 cggcgcggat tttccggtgg ttacggtgaa ggactgggta aaatcacaag ccgcgcttgc
    17101 cgactatctc ggcatcgggc aatgggcggc ggttgtcggc ggcagtttgg gcggtatgca
    17161 ggctttgcag tgggcgattt cctatcccga acgcgtgcgc catgccttag tgattgcgtc
    17221 tgcgccgaaa ctgtccacgc aaaatatcgc gttcaacgat gtggcgcgtc aggcgatttt
    17281 gaccgacccc gatttcaacg aaggacatta ccgcagccat aataccgttc ctgcacgggg
    17341 cttgcggatt gcccgcatga tggggcacat tacctatctt gccgaagacg gtttgggcaa
    17401 aaaattcgga cgcgatttgc gttccaacgg ctatcaatac ggttatggcg ttgaatttga
    17461 agtagaatcc tatctgcgct atcagggcga caaattcgtc gggcggtttg atgccaacac
    17521 ctatttgctg atgaccaaag ctttggacta tttcgatccg gcggcggatt tcggcaacag
    17581 cctgacccgc gccgtgcagg atgtgcaggc aaaattcttt gtcgccagct tcagcaccga
    17641 ttggcgtttc gcgcccgaac gttcgcacga actggtcaag gccctgattg ccgcccaaaa
    17701 atccgtgcag tatatcgaag tcaaatccgc acacgggcac gatgcctttt taatggaaga
    17761 cgaagcctat atgcgtgcgg tcgccgccta tatgaacaac gtttataagg aatgtcagca
    17821 atgaacctgc gcgatgattt gcaactgatt tacgaccgga tacccgaagg cagccgcgtc
    17881 ttggacttgg gctgcggcga cggcgaactg cttgccgcat tggtcgaaca caaaaaatgc
    17941 agcggctacg gcatcgaaat cgacaccgac agcgtgattg ccgcgatgtc gcgcggcgtg
    18001 aatgttatcc aagccgattt ggaagaaggt ttaaccgcat tcaacgatca aagttttgat
    18061 gtgattgtgt tgagccaaac catccaagcg atgcagaata ccgaaaaaat cctgcgctgc
    18121 ctgatgcgcg ttgccaaaca ggcgattgtc agcttcccga atttcggcta ctggcgcaac
    18181 cgcgtccaaa tcgcactcgg cggacatatg ccggtttccg aacgtatgcc ctaccattgg
    18241 tacgacacgc ccaatatcca ttggtgcacg ctcaaagact ttgatttgtt gtgcgccaaa
    18301 aacaacatcc gcgtcctcga acgcgccgtg atgacgggca acagacaggt caaacatttc
    18361 cccaaccttt tgggcagcct tgcgttttac cgcgtcggct aagacaggtt gagaaccttg
    18421 tcggcaataa caggttcttc ggttctatta acaacaggcc gtctgaaaaa tgaaacggta
    18481 ggttttcaga cggcctcttt aatactggaa acaatagaat gaaaaacaaa acctcatcac
    18541 ttctcttatg gcttgccgca atgatgctga ccgcgtgttc cccgagcaaa gaagataaaa
    18601 cgaaagaaaa cggcgcatcc gccgcctcgt ccacggcatc cgccgcttcg tcttccgcgc
    18661 cccaaaccga tttgcaaccg gccgcatccg cccctgataa cgtcaagcag gcagaaagcg
    18721 tgccgccgtc aaattgcacc gacctgcacc ccgccaccgg cattgacgat ctcatgcagc
    18781 aaatcgccga acacattgac tcggactgtc tgtttgccct ttcccatcac gaactggaaa
    18841 cccgtttcgg cttacccggc ggcggctatg acaacataca gcggctgctg tttcccgaca
    18901 tccgccctga agatcccgac taccatcaga aaatcatact ggcaattgaa gacttgcgtt
    18961 acggaaagcg cacgatcagc cggcaggcac aagatgcctt gatggaacag gaacgccgcc
    19021 tccgagaagc gacgctgttg ctgatacagg gcagtcaaga aacccgcgga caaggcgagg
    19081 agccgaaacg cacgcgttat tttgaagttt cggcaacccc tgcctattcg agccggcaca
    19141 acaacggact tggcggcaat ttccaataca tcggccaatt gcccggctat ctgaaaatac
    19201 acggagaaat gcttgaaaac caatcactct tccggctgtc caaccgtgaa cgcaatcccg
    19261 acaaaccgtt tttagacatc cattttgacg aaaatggcaa aatcacgcgt attgtcgttt
    19321 acgaaaaaaa catctacttc aatccaaact tggggcgaag ataaaaaaat gccgtctgaa
    19381 acgttttcag acggcatttt tcaatgcaac aaatcaagcg cgtttgcgga attcgccggt
    19441 gcgggtatcg atttcgattt tgtcgccgtt ttcgatgtaa gacatcactt ggatttcggt
    19501 gccgccgacc aggcgcgcgg ttttcatcac tttgccggaa gtatcgcctt tgacggcagg
    19561 ctcggtatac tcgacttcgc gtacgatgat ggtgggcagt tctacggaga tggggttgcc
    19621 ttcgtagaag gtaacttcgc attggtcttc catgccgtca acgatgaatt tcaacgcgtc
    19681 gccgatgttg tcggcttcga tttcgtattg gttgaattct tcgtccataa agacgtacat
    19741 cggatcggca aagtagctgt acgtacagtt tttgcgggac aggatgacca cgtcgaattt
    19801 gtcgtcggct ttgtaaatgg tttcggaagc cgcgccggtc agcaggtttt tcagtttcat
    19861 gctgactttg gcggaagagc ggccgccttt gatgtattcg gttttttgaa cgaccatagg
    19921 atcgttgccg accataaata cattgccggc gcgcagttct tgtgctgttt tcattgtgat
    19981 tttccaatca aatcggttgt cgtaaaacgc actattctag cgtatttttt gatgctttga
    20041 aacaaaggcg gcgagttttt cggatgcgga aggctgcccg aaaagataac ggctccaatc
    20101 ctccgcgcct tgccgccagc cgttttgatg ttgttgcagg atttgccaac attcgaggcg
    20161 ttgcgtggcg gataaagccc ctccgccgtt gaggtcgtcc gaaagacggc ggtgtgccga
    20221 cacggtttcg ggcgtgtaga aaccgtgtgc cttatcccaa aaggcgtgga gtttgtcgag
    20281 atggacattc tcgtcttgcg ggtagatgtg ccaaaagaag ggtttgccgg caagctgggc
    20341 gcgcacgaaa ctgtcttcgc cgcgtatcac ggcgcagtcg gcgaggtgca gcagtttgtc
    20401 gaagtcctgt tgcggcacga aagggatttt gacgaggcgg acggatgccg tctgaaaaac
    20461 atcgccgtcg ttttgcaggg catcttgcgg aataacgccg ctttgtttga ggctgtcgat
    20521 gatttgcgtc cccgccagca acagtgtcat cgggctgcct gcctgtcgcc acatttccag
    20581 ccactttgcc caaacatcgc tccgatagcc gaaaagcagc cattcggggg cgtttttttc
    20641 gggaagcatc agccgctgac gcagggcttc gctatcgaaa cggacggctt cgcagtaatc
    20701 gcgttcgcgt atcaacccgc cgcttttttc gctgaaaccc ataaaccaaa aatatttttg
    20761 aacaccttcc tgcggcgaag gcatcaggtg cagcctttca ttgctttcct ccgcgctcaa
    20821 atattcccaa ttcagccaaa gcggcttgtg tcggcggata atgtgcagca cattttcggg
    20881 caggtcgcag gcaaaagttt cgatgacgac atcgggaaca ggcgcggtat caatatctgc
    20941 cgcatcggaa tgccaagtgc ggacatgaat atcctgatga acgcagggaa catcgggcaa
    21001 atcagggcaa agcgcacgca aggcggacac atcgtccgtc cacaaatgca cctgccaacc
    21061 gagttcgcgg tgcaaaacac gggcgagccg ccacgaaacg ccgatgtcgc cgaaattgtc
    21121 gatgaccttg caaaaaatcc aacagacaaa aggaggagta ttcatagaaa taacggaaac
    21181 gggctaaaac gcgccgaaat agtggaacaa atacacaacc agcaaaacaa tcggaataaa
    21241 cagcaacatg gtttgacgtt tcaaatcaaa ctcttgtttc aaatgatgct tgatggtgtc
    21301 gaaaaggacg aatttgaaca aaaacgtcgc ttcgcaggca aggatgatgc cgttgatcag
    21361 atgctggggt ttgtcttcgg gcggattggc gacgaaaacg gcaagcgtcg ccaaagggat
    21421 gaggcagacg acaagccagc ggacaagcag gtttcgggac attgcaaggc tttcaaaaaa
    21481 gcaaaacgcc attatcgccc caagcgcacg ccttgtctaa cggacgcgcc ggcgatgccg
    21541 tctgaagcct tgccgcagga aaacaccgca ccgccgaacc tttaaatacg cccgagacgg
    21601 gcgttccccg aaaaatcgga cgctgccgcc gatgcctgcg gacaaggctg catcgggcac
    21661 gggcatattg aaaacccggc gcgtcggttt gaaat
//
LOCUS       DAWGKF010000017        21064 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.017, whole genome shotgun sequence.
ACCESSION   DAWGKF010000017 DAWGKF010000000
VERSION     DAWGKF010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21064)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21064)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21064
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.017"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..176
                     /locus_tag="WHR07_000454"
     CDS             <1..176
                     /locus_tag="WHR07_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129710.1"
                     /translation="LVLIFVNPLYNVGIGSGALLGHWVTQYSGISCIGIAGMLVSAAG
                     LWVCLNLNRHIRT"
     gene            305..1741
                     /locus_tag="WHR07_000455"
     CDS             305..1741
                     /locus_tag="WHR07_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HEZ2129711.1"
                     /translation="MPLLSVEFALFFLAFLPIYWGLAKYPSAQNLLLLAAGMGWLYHI
                     GPVFAAIIVLYSSCVYLLGELLRSDRENTRRFWLGCGIAASLTVLGFFKYFDFFRPLI
                     AQYAGKGGAIDILMPLGLSYYTFQSLAYLVYCFRAPHAARFSWHELLLHLSFFPTVTS
                     GPIIRAAAFKSADGEQAGALAQIRTRQPRSPVRPALAVSLILLGIAKKWWLAGMLAEN
                     WVSPVFENPAQFNGWGVLAGVYGYTFQLFLDFSGYSDLVIGMAMLLGFRLPKNFSAPL
                     RAANIRAFWDKWHISLSTWIRDYIYIPLGGSKKGFLRTQLNLMAAMVLSGIWHGYGWN
                     FLIWGALHGTALVLLNTGDRYFGRNALCRLKYLAPLSWFVTFHFVCLSFVVFNTASPD
                     DAGAVFNALFANANGWNAPQQANMLLLASFASVMLLYPYLQRAFDGAVKGLEKIPMWL
                     WFIPISIILLLIIVLAPSGIPGFIYANF"
     gene            1752..2738
                     /locus_tag="WHR07_000456"
     CDS             1752..2738
                     /locus_tag="WHR07_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF459 domain-containing protein"
                     /protein_id="HEZ2129712.1"
                     /translation="MKHFLSLFASILMSALIAAWFAQNPINAYWQQTYHRNSPLEPLA
                     AYGWWRSGAALQENAYTLSDGIKAFLSGETPPTAQDGGSADMPPEAAASEAAPQTGEI
                     QEWKQDTDTAAVRSGDKVFFAGDLLMQGVAPFVQKSLKQQYGIESVNLSKQSTGLSYP
                     SFFDWPKTIEETLKKHPEISVLAVFLGPNDPWDFPVGKRYLKFASDEWAQEYLKRVDR
                     ILEAAHTHRVQVVWLGIPYMKKAKLDGQMRYLDKLLSEHLKGKIILIPTAHTLSGGKD
                     RYTDSVNVNGKPVRYRSKDGIHFTAEGQKLLAAKIMEKIVFEPSTQPSSTQP"
     gene            2735..3928
                     /locus_tag="WHR07_000457"
     CDS             2735..3928
                     /locus_tag="WHR07_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEZ2129713.1"
                     /translation="MNSKHLIAFSALFAATQAEALPVASVSLDTVTVSPSAPYTDTNG
                     LLTDYGNAAASPWMKKLQSVAQGSGETFRILQIGDSHTAGDFFTDSLRKRLQKTWGDG
                     GIGWVYPANVKGQRMAAVRHNGNWQSLTSRNNTGDFPLGGILAHTGSGGSMTLTASDG
                     IASKQRVSLFAKPLLAEQTLTVNGNTVSANGGGWQVLDTGAALPLTIHTEMPWDIGFI
                     NIENPAGGITVSAMGINGAQLTQWSKWRADRMNDLAQTGADLVILAYGTNEAFGDNID
                     IADTEQKWLDTVRQIHDSLPAAGILIIGAPESLKNTLGVCGTRPVRLTEVQQMQRRIA
                     RQGQTMFWSWQNAMGGVCSMKNWLNQGWAAKDGVHFSAKGYRRAAEMLADSLEELVRA
                     AAIRQ"
     gene            4177..5730
                     /locus_tag="WHR07_000458"
     CDS             4177..5730
                     /locus_tag="WHR07_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase"
                     /protein_id="HEZ2129714.1"
                     /translation="MNRTYANFYEMLAAACRKNGNGTAVFDGKEKTAYRALKQEAEAV
                     AAYLQNIGVKFGDTVALAVSNSTEFITAYFAVSAIGAVAVPMNTFLKNSEYAYILNDC
                     KARFLFASAGLSKELAGLKAQTPVEKIIWTDKSRPAGEMAEGDAFFEDVRRFPEKPDL
                     GRQPRINDLAHIIYTSGTTGHPKGALISYANLFANLNGIERIFKISKRDRFIVFLPMF
                     HSFTLTAMVLLPIYMACSIILVKSVFPFSNVLKQALLKRATVFLGIPAIYTAMSKAKI
                     PWYFRWFNRIRLFISGGAPLAEQTILDFKAKFPRAKLLEGYGLSEASPVVAVNTPERQ
                     KARSVGIPLPGLEAKAVDEELVEVPRGEVGELIVRGGSVMRGYLNMPAATDETIVNGW
                     LKTGDFVTIDEDGFIFIVDRKKDLIISKGQNVYPREIEEEIYKLDAVEAAAVIGVKDR
                     YADEEIVAFVQLKEGMDLGENEIRRHLRTVLANFKIPKQIHFKDGLPRNATGKVLKRV
                     LKEQFDGNK"
     gene            complement(5820..7847)
                     /locus_tag="WHR07_000459"
     CDS             complement(5820..7847)
                     /locus_tag="WHR07_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HEZ2129715.1"
                     /translation="MSLSEFIERRTSFNPMVILTTLFFVCVLVVLVLTVPDQAQMWLD
                     RAKEVIFTEFSWFYVLTFSIFLGFLLILSVSSLGNIRLGRDEDVPEFGFLSWLAMLFA
                     AGMGVGLMFFGVAEPLMHYFSDITAGTPEHRQQQALLHTVFHWGVHAWSVYGTIALAL
                     AYFGFRYKLPLALRSCFYPLLKEKISGRFGDAIDIMALLATFFGIITTLGFGASQLGA
                     GLQEMGWIAENSFSVQVLIIAAVMSLAVVSAISGVGKGVKVLSELNLSLAFLLLFFVL
                     AAGPTVYLLSAFGDNIGNYLENLVRLSFKTYAYEREHKPWFESWTVLYWAWWCSWAPF
                     VGLFIARISKGRTIREFVFGVLLIPGLFGVLWFTVFGNTAIWLNDGVAGGMLEKMTSS
                     PETLLFKFFNYLPLPELTSIVSLLVISLFFVTSADSGIYVLNNITSRDKGLSAPRWQA
                     VMWGVLMSAVAVLLMRSGGLGNLQSMTLIVSLPFALLMLIMCFSLWKGLSADKKYFET
                     RVNPTSVFWTGGKWKERLVQIMSQTQEQDILKFLKHTASPAMHELQRELSEEYGLSVR
                     VDKMFHQDEPAIEFVIRKETMRDFMYGIKSVGQDVSDQLINDGNLPHIRHQTTYKPYA
                     YFFDGRVGYDVQYMNKDELIADILKNYERYLMLLDDVGQELMAHEQVELAE"
     gene            8136..10142
                     /locus_tag="WHR07_000460"
     CDS             8136..10142
                     /locus_tag="WHR07_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific recombinase"
                     /protein_id="HEZ2129716.1"
                     /translation="MADMKKITPQNLRPLLSESLGHTDFVNVLNALIKFLRRGGKKCA
                     GERFDLIIDTFKQDRELLSRFSRCFYIWLAQIHIYPALIKLGIFSRHSFAREMGIRIY
                     ERFSPSYKDFANLGEVFLYLFHSENDDKWLQTLNIRQWLVLYELIRSHAEPSKLQTAG
                     IRLADARLRAIEMLSVWTASEAIEPDLIRIAPRLLEADSSFVALQRETAKLVEHYRNG
                     TAPYDTAHLEVMFDQCFSQIDYLRRKGTGAGSGSSVKVAHLLERLRQTVDRLKLLTDI
                     QTGAGNSNRLTIALMNSLIYAAVEQYSTRHLRRSSIRMLARSITENKSHHGEHYITRN
                     RKEYFKMFYSAAGGGVIIALMALLKIRIGTLGLSPFLTSLSAGFNYGIGFMIIHMLHC
                     TVATKQPAMTAASFAEQVDLNEGGKAVDNKLAKLLIDVCRSQSVAVFGNVSIAILLAC
                     AISFGYAHLYRQPILDAHTAAYQFKSIDIIAYPTLWYAAIAGLWLFCSGIIAGFFDNR
                     ADYLNLRQRLPFNPLLRKIMRPGPRRVLAAYIHKHYGSLVGNFIFGMLLGMTGYFGHL
                     LGLPLDIRHVAFSSANLGYAAVSGNVGLGTFVLGIFSVLAIGLVNLCVSFSLALFVAL
                     RSRRTKIGSIRNLIKSFWNQIKSNPCILFLPPAKEQGHPPSDKP"
     gene            complement(10265..11356)
                     /gene="mltB"
                     /locus_tag="WHR07_000461"
     CDS             complement(10265..11356)
                     /gene="mltB"
                     /locus_tag="WHR07_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HEZ2129717.1"
                     /translation="MKKRKILPLAICLAALSACTAMEARPPRVNEAQAPRADEMKKES
                     RPAFDAAAVPVSDSGFAANANVRRFVDDEVGKGDFSRAEWQDFFDKAAYKADIVKIMH
                     RPSTSRPWYVFRTGNSGKAKFRGARRFYAENRALIDDVAQKYGVPAELIVAVIGIETN
                     YGKNTGSFRVADALATLGFDYPRRAGFFQKELVELLKLAKEEGGDVFAFKGSYAGAMG
                     MPQFMPSSYRKWAVDYDGDGHRDIWGNIGDVAASVANYMKQHGWRTGGKILVSATLAP
                     GADVQAIIGEKTALTRTVADLKAYGIIPGEELADDEKAVLFKLETAPGVFEYYLGLNN
                     FYTVWQYNHSRMYVTAVRDIANSLGGPGL"
     gene            complement(11505..12932)
                     /locus_tag="WHR07_000462"
     CDS             complement(11505..12932)
                     /locus_tag="WHR07_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HEZ2129718.1"
                     /translation="MIHTEPSAQPSTMDTAAFLKHIESAFRRIFSDGIDLMRYLPEDK
                     WLALKQAGLLLPFLDKRHGGRKGSQFEIQEVLRIAGHYGVPVTLRTGIEGALVLQPLQ
                     EFGDEAQIAQGLDMVFKGEGGGLGVTEPETSGAAIAREMQSYYEYTDGQTIYVNAAKY
                     WQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRCETLASEGLRAVRYAVNRIDA
                     EMPATAVMKLSQSDAAGLRAFQNIFIRSRLQLIGMTHGIMEYILENLERYVRNDIRFV
                     DYERREIRRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVKTLATEYTYAAAQMLQK
                     LLGAKGFERGHTAGNIAIDIRPFTIFEGPNDMLYAEIYDQFVRATAEEKEAGMKLDKN
                     QTLLDRLQTDARFAAVARDYTLPEDIRSFLQEHTLTDACALQKVFIGKIIARLFVFVQ
                     AEHEDTAAFLLNDIRKDILDCRYCG"
     gene            13117..17244
                     /gene="mfd"
                     /locus_tag="WHR07_000463"
     CDS             13117..17244
                     /gene="mfd"
                     /locus_tag="WHR07_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEZ2129719.1"
                     /translation="MTYPIPKPREKSRWPNLSQGSLPLALARYLPHKRLKVVLTQDAE
                     QALRLQTAWRFFRPHDTAVFLPDWETLPYERFSPHQDLVSERLSALWQIKSGAADVLF
                     VPVATAMQKLPPVPFLAGRTFWLKTGQTLDIGRLKTDLVDAGYNHVSHVVAAGEFAVR
                     GGIVDLFPMGSEMPYRIDLFDDEIDSIKTFDTDTQRTISPVSEIRLLPAHEFPTDSEA
                     QKIFRSRFREEVDGNPNDAAVYKAVSNGHFGAGVEYYLPLFFENELETLFDYIGEDAL
                     FVSLGDVHAEANRFWSDVKSRYAMAQGDETYPPLLPQHLYLSADVFAGRLKNYGQVLP
                     DVSGKEHALPDLAVNRQSDEPLQALKDFQTAFEGRILLCAESLGRRETMLGFLQQNGL
                     KAKSVSDWQGFLSAHEPLMITVAPLAYGFKLGGLQSPNQQQTTSASEGEGDAVTDQTE
                     FSASATNPLPSPLPQEREQSAAAVSDSLKAAAVSTESSLPLGTSNLHGQIRQQPAPSP
                     VGEGWGEGKAVAAQTEFPASATNPLPSPLPQEREQSAAAVSDDLKTKSSLHPVANNLH
                     GQIRQQPTPSPVGEGWGEGKAVAAQTEFSAAATKPLPSPLPQEREQSAAVVSDSLKAA
                     AVSTESSLPPGKSNLHGQIQQQPAPSPVGEGWGEGKAVAAQSAIAVITESDLYQYVAR
                     SRVHNRRKKHAAVSDGLLRDLAEINIGDPVVHEEHGIGRYMGLITMDLGGETNEMMLL
                     EYAGEAQLYVPVSQLHLISRYSGQAHENVALHKLGSGAWNKAKRKAAEKARDTAAELL
                     NLYAQRAAQSGHKFEINELDYQAFADGFGYEETEDQAAAIAAVIKDLTQAKPMDRLVC
                     GDVGFGKTEVALRAAFVAVMGGKQVAVLAPTTLLVEQHAQNFADRFADFPVKVASLSR
                     FNNSKATKAALEGLADGTVDIVIGTHKLVQDNIRFKSLGLVIIDEEHRFGVRQKEQLK
                     RLRANVDILTMTATPIPRTLSMALEGLRDFSLITTAPSRRLAVKTFVKPFSEGSVREA
                     VLRELKRGGQVFFLHNEVDTIENMRERLETLLPEARIGVAHGQLRERELEQVMRDFLQ
                     QRFNVLLCSTIIETGIDIPNANTIIINRADKFGLAQLHQLRGRVGRSHHQAYAYLLTP
                     EYITKDAEKRLDAIAAADELGAGFTLAMQDLEIRGAGEILGEGQSGEMIQVGFTLYTE
                     MLKQAVRDLKKGRQPDLDAPLGITTEIKLHSPALLPESYCPDIHERLVLYKRLAVCET
                     VQQINAIHEELVDRFGLPEQPVKTLIESHHLRLMAKELGIDAIDAAGEAVTVTFGKNN
                     NVDPTEIILLIQNDKKYRLAGADKLRFTAEMENIEVRINTVKNVLKTLQNRCLPK"
     gene            17393..17776
                     /locus_tag="WHR07_000464"
     CDS             17393..17776
                     /locus_tag="WHR07_000464"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HEZ2129720.1"
                     /translation="MFRTMLGGKIHRATVTEADLNYVGSITVDQDLLDAAGIYPNEKV
                     AIVNNNNGERFETYTISGKRGSGVVCLNGAAARLVQKGDIVIIMSYVQLSEPEIAAHE
                     PKVVLVDGNNKIRDIISYEPPHTVL"
     gene            17798..18640
                     /gene="kdsA"
                     /locus_tag="WHR07_000465"
     CDS             17798..18640
                     /gene="kdsA"
                     /locus_tag="WHR07_000465"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEZ2129721.1"
                     /translation="MDIKINGITVGNDAPFVLFGGINVLEDLDSTLQTCAHYVEVTRK
                     LGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIPVITDVHEPHQCQPV
                     AEVCDVIQLPAFLARQTDLVAAMAETGNVINIKKPQFLSPSQMKNIVEKFREAGNGKL
                     ILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQA
                     LDLALAGMATRLAGLFLESHPDPKLAKCDGPSALPLHLLEDFLIRIKALDDLIKSQPI
                     LTIE"
     gene            18655..19095
                     /locus_tag="WHR07_000466"
     CDS             18655..19095
                     /locus_tag="WHR07_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HEZ2129722.1"
                     /translation="MMQTFRKISLYAATLWLGMQIMAGYIVAPVLFKMLPKMQAGEIA
                     SVLFDILSWSGLAVWGAVLAAAFAALTRRQTALLLFLLSALAANRFLITPVIEALKYG
                     HENWLLSFVGGSFGMWHGISSIVFMATALLSAVLSWRLSGKEAV"
     gene            19142..20428
                     /gene="eno"
                     /locus_tag="WHR07_000467"
     CDS             19142..20428
                     /gene="eno"
                     /locus_tag="WHR07_000467"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEZ2129723.1"
                     /translation="MSAIVDIFAREILDSRGNPTVECDVLLESGVMGRAAVPSGASTG
                     QKEALELRDGDKSRYSGKGVLKAVEHVNNQIAQALIGIDASEQSYIDQIMIELDGTEN
                     KGNLGANATLAVSMAVARAAAEDAGLPLYRYLGGAGPMSLPVPMMNVINGGEHANNSL
                     NIQEFMIMPVGAKSFREALRCGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLNSHKEA
                     LQLMVEATEAAGYKAGEDVLFALDCASSEFYKDGKYHLEAEGRSYTNAEFAEYLESLV
                     NEFPIISIEDGMDENDWEGWKLLTEKLGGKVQLVGDDLFVTNPKILAEGIEKGVANAL
                     LVKVNQIGTLSETLKAVDLAKRNRYASVMSHRSGETEDSTIADLAVATNCMQIKTGSL
                     SRSDRMAKYNQLLRIEEELAEAADYPGKAAFYQLGK"
     gene            20442..20720
                     /gene="ftsB"
                     /locus_tag="WHR07_000468"
     CDS             20442..20720
                     /gene="ftsB"
                     /locus_tag="WHR07_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HEZ2129724.1"
                     /translation="MKWVTVVLSFALVCCQYSLWFGKGSIGRNSSLREQIAVQEEKNQ
                     TLALRNHSLAAEVYDLENGQEAISEIARVELGYIQDGETFYRLIRHNR"
     gene            complement(20761..21051)
                     /locus_tag="WHR07_000469"
     CDS             complement(20761..21051)
                     /locus_tag="WHR07_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S ferredoxin-like protein"
                     /protein_id="HEZ2129725.1"
                     /translation="MARIGTNKGFFELLEGETLLEGLERTGHMVEYQCRSGYCGSCRV
                     KILEGSVTYRKPPLAFLGRDEILPCCCYVEGDVRLDCGLSGEDEGLSDSLLK"
BASE COUNT         5024 a         6399 c         5249 g         4392 t
ORIGIN      
        1 gccttgtcct gatttttgtt aatccactat acaacgtcgg tatcggcagc ggcgcactgt
       61 tgggacattg ggtaacgcaa tactcgggca tttcctgcat cggcattgcc ggtatgctgg
      121 tatcggcggc aggtttgtgg gtctgcctga atttgaaccg ccatattcga acctgaccgc
      181 gcgatgccgt ctgaagcccc tcccgccctt cagacggcat tttgattgaa gaaatatccg
      241 cccctgctta aaataacagg ctttgccgtg ttttaacgcc tattttttgt tccaaggatg
      301 gtttatgccg ttgctgtctg tcgagttcgc actgttcttt ctcgctttcc tgccgattta
      361 ctggggcttg gcgaaatacc cgtccgccca aaacctgctg cttctggctg ccggtatggg
      421 ctggctctac catatcggcc ccgtatttgc ggcaatcatc gtcctttatt cctcctgcgt
      481 gtaccttttg ggcgaactgc tccgttccga tcgcgaaaat acgcgccgct tttggctggg
      541 gtgcggcatt gccgcctcgc tgaccgtctt gggctttttc aaatatttcg actttttccg
      601 gccgctgatt gcccaatatg ccggaaaagg cggcgcaatc gacatcctga tgccgctggg
      661 gctttcgtat tacaccttcc agtcgctcgc ctatcttgtt tactgcttcc gcgccccgca
      721 cgccgcgcgt ttcagctggc acgagctgct gctgcacctg agttttttcc ccaccgttac
      781 ctccggcccg attatccgcg ccgccgcatt caaaagcgca gacggcgagc aggcaggcgc
      841 attggcgcaa atccgtaccc gccaaccgcg ctcacccgtc cgccccgcac tcgccgtttc
      901 cctgattctg ctgggtattg ccaaaaaatg gtggctggcg gggatgctcg cagaaaactg
      961 ggtgtcgccc gtgtttgaaa accccgccca attcaacggc tggggcgtgt tggcgggcgt
     1021 gtacggctat accttccaac tcttcctgga cttttccgga tattccgatt tggttatcgg
     1081 catggcgatg ctgctgggct tccgactgcc caaaaacttc tccgcaccgc ttcgtgccgc
     1141 gaatatccgt gcattttggg acaaatggca catcagcctt tccacctgga tacgcgacta
     1201 catctacatc cccttgggcg gcagcaaaaa aggctttttg cggacacagc tcaacctgat
     1261 ggcggcaatg gtactctcag gcatctggca cggctacggc tggaacttcc tcatttgggg
     1321 cgcgctgcac ggcacggcgc tggtgctgct caacacgggc gatcgctatt tcggacgcaa
     1381 cgcgctatgc cgtctgaaat accttgcgcc gctctcgtgg tttgttacct tccatttcgt
     1441 ctgccttagc tttgttgtct tcaataccgc aagccccgac gatgcaggcg cagttttcaa
     1501 tgccctcttt gccaatgcca acggctggaa tgcgccgcaa caggcaaaca tgctgctgct
     1561 tgcctcgttt gcatccgtga tgctgctcta cccttacctg caacgcgctt tcgacggcgc
     1621 ggtcaaaggt ttggaaaaaa tcccgatgtg gctgtggttt atcccgattt ccatcatcct
     1681 gctgctgatt atcgtccttg ccccctcggg gatacccggt tttatttatg ccaattttta
     1741 agggtttgga catgaaacac tttctttccc ttttcgcttc catattgatg tctgccctga
     1801 ttgccgcgtg gtttgcccaa aacccgatca atgcctactg gcagcagacc taccaccgca
     1861 acagcccgct cgaaccgctt gccgcctacg gatggtggcg gagcggtgcg gcgttgcaag
     1921 aaaacgccta caccctttca gacggcatca aagccttcct gtccggcgaa acgccgccga
     1981 cggctcaaga cggcggttcg gcagatatgc cgcctgaagc cgccgcatcc gaagccgccc
     2041 ctcaaaccgg cgaaatccaa gaatggaaac aggacaccga caccgccgcc gtccgcagcg
     2101 gcgacaaagt ctttttcgcc ggcgacttgc tgatgcaggg cgttgcaccc ttcgtgcaaa
     2161 aaagcctgaa acagcaatac ggcatcgaat ccgtcaacct cagcaaacaa agcacggggc
     2221 tgtcctaccc ctcattcttc gactggccga aaacgattga agaaaccctg aaaaaacatc
     2281 ccgaaatcag cgtgctcgcc gtcttcctcg gcccgaacga cccgtgggat ttccccgtcg
     2341 gcaaacgcta cctcaaattc gcttccgacg aatgggcgca agaatacctg aaacgcgtcg
     2401 accgcatcct tgaagccgca cacacgcacc gcgtccaagt cgtctggctc ggcatcccct
     2461 acatgaaaaa agccaagctc gacgggcaga tgcgctacct cgacaaactg ctttcggaac
     2521 atttgaaagg caaaatcatc ctgattccca ccgcgcacac cctgagcggc gggaaagacc
     2581 gctacacgga ctccgtcaac gtcaacggca aacccgtccg ctaccgcagc aaggacggca
     2641 tacactttac cgccgaagga caaaaactgc tggcggcaaa aataatggaa aaaatcgttt
     2701 ttgaaccaag tacgcaacca tcaagtacac agccatgaat tccaaacacc tcatcgcatt
     2761 ttccgccctg ttcgccgcca cgcaggcaga agccctgccc gtcgcctccg tcagcctcga
     2821 caccgttacc gtttccccgt ccgcccccta caccgataca aacgggctct tgaccgacta
     2881 cggcaatgcc gccgcctcgc cttggatgaa aaaactccaa tccgtcgcac aaggcagcgg
     2941 cgagaccttc cgtatcctgc aaatcggcga ctcgcatacc gccggcgact tctttaccga
     3001 cagcctgcgc aaacgcctgc aaaaaacttg gggcgacggc ggcataggct gggtttaccc
     3061 cgccaacgtc aaagggcagc gcatggcggc cgtccggcac aacggtaact ggcaaagcct
     3121 caccagcagg aacaacaccg gagacttccc gctcggcggc atcctcgccc acaccggcag
     3181 cggcggcagc atgaccctga ccgcatcgga cggcatagca agcaagcagc gcgtttccct
     3241 gtttgccaaa cccctgcttg ccgaacaaac cctgaccgtc aacggcaaca ccgtctccgc
     3301 caacggcggc ggctggcagg tactggatac gggcgcggca ctgcccctga ccatacacac
     3361 cgaaatgccg tgggacatcg gcttcatcaa catcgaaaat cccgccggcg gcattaccgt
     3421 ttccgcgatg ggcatcaacg gcgcacaatt aacccagtgg tcgaaatggc gtgccgaccg
     3481 tatgaacgac cttgcccaaa ccggcgccga tctagtcatc cttgcctacg gtaccaacga
     3541 agccttcggc gacaacatcg acattgccga cactgaacaa aaatggctgg ataccgtccg
     3601 ccaaatccac gacagcctgc ctgccgccgg catcctcatc atcggcgcgc ccgaatccct
     3661 gaaaaacacg ctcggcgtat gcggcacacg ccccgtccgc ctgaccgaag tccaacagat
     3721 gcagcggcgc atcgcccgtc aggggcagac gatgttctgg tcttggcaaa acgcgatggg
     3781 cggcgtttgc agcatgaaaa actggctcaa ccaaggatgg gccgccaaag acggtgtaca
     3841 cttctccgcc aaaggctacc ggcgcgcggc ggaaatgctc gccgacagcc tcgaagaact
     3901 cgtccgcgcc gccgcaatca ggcaataatc ggacaggagg cggacggtat ttccgcaaca
     3961 gggggatgcc gtctgaaacg cataccttca tattgcttca gacggcattc gcctcagaca
     4021 ttggaaagac gcaggcgaac ctccggcata cggcgcaaag gcggcgtttg atatgccgtc
     4081 tgaaggcaaa gatgataaac tgccgccttc cgttttcata cggcatattg ttttcaaatg
     4141 agggcgttcg ccgtccgcaa ccataaagga agtttcatga accggactta tgccaatttc
     4201 tacgaaatgc tcgccgccgc ctgccgcaaa aacggcaacg gcacggcagt gttcgacggc
     4261 aaggaaaaaa ccgcctaccg cgcgctcaag caggaggccg aagccgtcgc ggcgtatctg
     4321 caaaatatcg gcgtgaagtt cggcgacacg gtcgcgctgg cggtttccaa ttccacagaa
     4381 tttattaccg cctatttcgc cgtctccgcc atcggcgcgg tcgccgtacc gatgaacaca
     4441 tttttgaaaa acagcgaata cgcgtatatc ctgaacgact gcaaggcgcg cttcctgttc
     4501 gcctcggcgg gcctgtcaaa agagttggcg ggcttgaagg cgcaaacgcc cgtcgaaaaa
     4561 atcatttgga cggacaaaag ccgtccggcc ggcgaaatgg cagaaggcga tgcctttttt
     4621 gaagacgtgc gccgcttccc cgaaaaaccc gacttgggcc gccaaccccg gataaatgat
     4681 ttggcacaca tcatctacac ctccggcacg acggggcatc ccaaaggcgc gctaatcagt
     4741 tacgccaacc tgttcgccaa cctgaacggc atcgaacgca tctttaaaat ctccaagcgc
     4801 gaccgcttta tcgttttcct gccgatgttc cacagcttca cgctgacggc tatggtgctg
     4861 ctgccgattt atatggcgtg ttcgattatt ttggtcaaat ccgttttccc gttttccaac
     4921 gttttgaaac aggccctgct caaacgcgcg accgtgtttt tgggcatacc cgcgatttac
     4981 accgcaatga gcaaggcgaa aatcccttgg tatttcagat ggttcaaccg cattcgcctg
     5041 tttatcagcg gcggtgcgcc tttggcggaa caaaccatcc tcgatttcaa agccaagttc
     5101 ccccgcgcca aattgctgga aggctacgga ctgagcgaag cctctcccgt cgtcgccgtc
     5161 aatacgcccg agaggcaaaa agcccgcagc gtcggcatcc ccctgcccgg tttggaagcc
     5221 aaagccgtcg atgaagaatt ggtcgaagtg ccgcgcggcg aagtgggcga actgatcgtc
     5281 aggggcggtt cggtgatgcg gggctacctc aatatgcctg ccgccaccga tgaaaccatc
     5341 gtcaacggct ggttgaaaac gggcgatttc gttaccatag acgaagacgg ctttatcttt
     5401 atcgtcgacc gcaaaaaaga tttgattatt tccaaaggtc aaaacgtcta tccgcgcgaa
     5461 atcgaagaag aaatctacaa actcgatgcc gtcgaagccg ctgccgtcat cggcgtgaaa
     5521 gaccgttatg ccgacgagga aatcgtcgcc ttcgtccaat tgaaggaagg tatggatttg
     5581 ggcgagaacg aaatccgccg ccacctgcgt accgtgctgg caaatttcaa aatccccaaa
     5641 caaatccact ttaaagacgg gctgccgcgc aacgctacgg gcaaggtatt gaaacgggtg
     5701 ttgaaggagc agtttgacgg aaacaaatga acgccgtgcc gtccgaagcc ccgtccggca
     5761 aaaaaaatgc ggtgaatctg cttcaccgca ttttttggca aacgccggag cgaggatatt
     5821 tactctgcca attccacctg ctcgtgcgcc atcagttcct gaccgacatc atccaacaac
     5881 atcaaataac gttcgtagtt tttcaaaatg tcggcaatca gctcgtcctt gttcatatac
     5941 tgcacatcgt acccgacgcg cccgtcgaaa aaataagcgt agggtttgta agttgtctga
     6001 tgccggatat gcggcaggtt gccgtcgtta atcaactggt cggatacatc ctgcccgaca
     6061 gacttaatcc cgtacataaa atcgcgcatc gtctctttcc gaatgacgaa ctcgattgcg
     6121 ggctcgtcct gatgaaacat cttatcgacc cggacgctca agccgtattc ttccgaaagc
     6181 tcccgttgca actcgtgcat agcgggcgat gcggtatgtt tgaggaattt taaaatatcc
     6241 tgctcctgcg tctggctcat tatctgcacc agccgttctt tccacttgcc gcccgtccaa
     6301 aatacactgg tagggttaac ccgggtctca aaatatttct tatccgcact caatcctttc
     6361 cacaggctga aacacattat cagcatcagc agggcaaacg gcagggaaac aatcagggtc
     6421 atagactgca ggttgcctag cccgcccgag cgcatcagca aaacggcaac ggcagacatc
     6481 agcacgcccc acataaccgc ctgccaccgt ggtgcgctca agcccttgtc ccgagaggta
     6541 atattgttca ggacataaat cccggaatcg gcagaagtta caaaaaacag ggaaatgacc
     6601 agcaggctga cgatgctcgt caattcgggc agggggaggt aattaaagaa tttaaaaagc
     6661 agcgtttccg gagaggaggt catcttttcg agcattcccc ccgcaacccc gtcattcagc
     6721 caaatcgccg tattgccgaa gacggtaaac cacaaaacgc cgaacaggcc ggggatgagc
     6781 aaaaccccga agacaaactc gcggatggtg cgcccctttg aaatacgcgc gataaacaaa
     6841 cccacaaacg gcgcccaaga acaccaccac gcccaataaa gcaccgtcca agattcaaac
     6901 cacggcttgt gttcccgttc gtacgcataa gttttaaaac tgaggcgcac cagattttcg
     6961 aggtagttcc ctatgttgtc gccgaatgcc gacaacaggt aaacagtggg gcccgccgcc
     7021 aaaacaaaaa acagcagcaa aaacgcaagg ctcaggttca actcgctcaa caccttcacg
     7081 cccttcccca cgccggatat tgccgaaacg acggcgaggg acatgacggc ggcgataatc
     7141 aaaacctgca cgctgaagct gttttcggca atccagccca tttcctgcaa tccggcgccc
     7201 agttgcgaag ccccgaaccc caatgtggtg atgatgccga aaaaagtagc aagcaacgcc
     7261 ataatatcaa tggcatcgcc gaaccttccg gaaatttttt ctttcaacag ggggtaaaaa
     7321 caagaacgca gggcaagcgg cagcttgtag cggaaaccga aataagccaa agccaatgca
     7381 atcgtaccgt acaccgacca agcgtgaacg ccccaatgga acaccgtgtg cagcaatgcc
     7441 tgctgctgcc tgtgttccgg cgtgccggcc gtaatgtccg aaaaataatg catcaacggc
     7501 tctgccacgc cgaaaaacat cagacccacg cccatcccgg ccgcaaacag catcgccagc
     7561 cacgacagga agccgaattc cggcacatct tcatcccgtc cgagcctgat gtttcccaaa
     7621 ctgctgaccg agagtatcag caggaaaccc agaaaaatgg aaaacgttaa aacataaaac
     7681 cagctgaact cggtaaaaat gacttctttt gcccgatcga gccacatctg cgcctgatcc
     7741 ggcacggtta aaaccaatac caccaaaaca cacacaaaaa acaaagtcgt caaaataacc
     7801 atcggattaa atgacgttcg gcgttctata aattcagaca gggacaaacc ttctcactcc
     7861 tttgttaaaa acagacaaac ccggtcatcg ggcaaagcgg tcaaaacctg ccggtaaaat
     7921 accggcttcc ggatgacgaa atgcacaaac cggccgaaat tgttataatc gaaaaaatta
     7981 aaaatcaata cggattattc tatcagattg atttatcgat atttattata tcattaatat
     8041 agtttgattt caaaccggcg gaaaatgcgc cgcccaccgc aggcgcgccc tccccgctat
     8101 cggggcgttt aacgccggat tgccgatgcg gtacaatggc tgatatgaag aaaattaccc
     8161 ctcaaaacct gcgccccctg ctttcggaaa gcttgggaca taccgatttt gtcaacgtcc
     8221 tcaacgcact gattaaattt ttgcgccgtg gcggcaaaaa atgtgcgggg gaacgtttcg
     8281 acctgattat cgacacattc aaacaagaca gggaattgct gtcccgcttc agccggtgtt
     8341 tttacatctg gctcgcgcaa atacacattt atccggcact catcaaactc ggcatcttct
     8401 cgcgccacag ctttgcccgg gaaatgggca tacgcatcta cgaacgcttc agcccgtcat
     8461 ataaagattt tgccaacttg ggcgaagtct tcctttatct tttccattcc gaaaacgacg
     8521 acaaatggct gcaaacgctc aatatccgcc aatggctggt tttatacgaa ctcatccgga
     8581 gccacgccga accgtccaaa ttgcagacgg cgggcatccg ccttgccgat gcgcgtttgc
     8641 gcgccatcga aatgctgtct gtctggacgg catccgaagc catcgaaccc gacctcatcc
     8701 gcatcgcccc gcgcctgctg gaagccgatt cttccttcgt cgccctccaa cgcgaaaccg
     8761 ccaaactggt cgaacactac cgcaacggca ccgcgcctta cgacaccgcc cacctcgaag
     8821 tgatgttcga ccaatgtttc agccagattg actatttgcg ccgcaaaggg acgggcgccg
     8881 gctccggttc gtcggtcaaa gtcgcccacc tgctcgaacg gctccggcag accgtagacc
     8941 gtctgaagct gctcaccgac atccaaaccg gcgccggcaa cagcaaccgc ctgaccatcg
     9001 cgctgatgaa ctccctcatc tacgcggcgg tcgaacaata cagcacccgc cacctgcgcc
     9061 gcagcagcat ccgtatgctc gcccgcagca ttaccgaaaa caaaagccac cacggcgaac
     9121 actacatcac ccgcaaccgc aaagaatatt tcaaaatgtt ctactcggcg gcaggcggcg
     9181 gcgtcatcat cgccctgatg gcgctgctca aaatccgcat cggcacactc ggcctcagcc
     9241 ccttcctcac ttccttgtcg gccgggttca actacggcat cggctttatg atcatccata
     9301 tgctgcactg caccgtcgcc accaagcagc ccgcgatgac tgccgccagc tttgccgaac
     9361 aggtcgatct caacgaaggc ggcaaagcgg tggacaacaa actcgccaag ctcctcatcg
     9421 acgtatgccg ctcccaaagc gtcgccgtct tcggcaacgt ttccatcgcc atccttttgg
     9481 cgtgcgccat atcgttcggc tatgcccatc tgtaccggca gcccatactc gatgcccaca
     9541 ccgccgccta ccagttcaaa tccatagaca tcatcgctta cccgacgctg tggtatgccg
     9601 ccattgcagg tctgtggctg ttctgctccg gcatcatcgc aggttttttc gacaaccgcg
     9661 ccgactacct caacctgcgc caacgcctgc ctttcaaccc cttgctgcgt aaaatcatgc
     9721 gccccgggcc ccgccgcgtc ctcgccgcct acatccacaa acactacggc tcgttggtag
     9781 gcaacttcat cttcgggatg ctcttgggta tgaccggcta tttcggacac ctcctcgggc
     9841 tgccgctgga catccgccac gtcgcctttt cctccgccaa cctcggctat gccgccgtca
     9901 gcggcaacgt cggtttgggc acgttcgtac tcggcatttt cagcgtcctc gccatcggcc
     9961 tggtcaacct ctgcgtcagt ttcagcctcg ccctcttcgt cgccctgcgc tcgcgccgca
    10021 cgaaaatcgg cagcatccgc aatctgatta aaagtttttg gaatcagatt aaaagcaatc
    10081 cctgcatact tttcctcccg cccgccaaag aacagggaca tcctccttcg gacaagcctt
    10141 gaccggcaat gccgtctgaa gcgggattcg ccccgaatac cgccctgatg cgggaaatcc
    10201 ccataaaagg atgcaaaaat gccgtctgaa tcgaaacgtg gttcagacgg cattttaaaa
    10261 aacattacaa tcccgggccg ccaagcgaat tggcaatgtc cctgaccgcc gttacataca
    10321 tccgactgtg attgtactgc cataccgtat aaaaattgtt caagcccaaa taatattcaa
    10381 acacgccggg tgcggtttcc agtttgaaca aaaccgcctt ttcatcatcg gcaagctctt
    10441 cgccggggat gatgccgtac gccttcaaat ccgccaccgt ccgcgtcagg gcggtttttt
    10501 cgccaatgat tgcctgaaca tccgcacccg gcgccaatgt tgcagacacc agtattttcc
    10561 cgcccgtgcg ccaaccgtgc tgcttcatat aattggcaac cgatgccgcg acatcgccga
    10621 tgttgcccca tatgtcccga tgtccgtccc cgtcataatc caccgcccat ttccggtagc
    10681 tcgaaggcat aaattgcggc atccccattg cgcccgcata gctgccttta aaggcgaaaa
    10741 catcgccgcc ttcttctttt gccagcttta aaagctcgac caattctttt tggaaaaacc
    10801 cggcgcggcg ggggtaatca aagcctaagg tcgccaatgc gtccgccaca cggaaactgc
    10861 ccgtattttt gccgtaattc gtttcaatcc cgataaccgc cacgataagt tcggcaggca
    10921 cgccgtattt ttgcgccaca tcatcgataa gcgcgcggtt ttccgcataa aaccggcgcg
    10981 cgccgcgaaa tttcgccttg cccgaatttc ccgtgcggaa cacataccac ggacgcgatg
    11041 tggagggtcg gtgcataatc ttgacgatgt ccgccttgta agccgctttg tcaaaaaaat
    11101 cctgccattc cgcccgggaa aaatcccctt tcccgacttc atcgtccaca aaacggcgga
    11161 catttgcatt ggcggcaaac ccgctgtcgg ataccggtac ggctgccgcg tcaaacgcgg
    11221 ggcggctttc ttttttcatt tcatccgcgc ggggggcttg ggcttcattt acccggggcg
    11281 ggcgtgcctc catcgccgta caggcagaca aagccgccaa acaaattgcc agcggcagta
    11341 tttttctctt tttcataaat atgttccgaa caaatagggt aagtgggaaa gcggcgcaag
    11401 gggcgcggtg cgaaatgcgg catccgccgc aatcggcggc tttgtggaat accgcgcgtt
    11461 gccttttgca ccgcctgaaa tccgtatgcc gccgtatttg cccgctatcc gcaatatcgg
    11521 cagtccaata tatctttgcg gatgtcgttc agcaggaagg ctgcggtgtc ttcgtgttcc
    11581 gcctgtacga agacaaagag tcgggcgatg attttgccga tgaagacttt ttgcagggcg
    11641 caggcgtcgg tcagggtgtg ttcctgcagg aagctgcgga tgtcttcggg caaagtgtag
    11701 tcgcgggcga cggcggcaaa gcgggcatcg gtttgcaggc ggtcgagcag ggtttggttt
    11761 ttgtccaact tcatgcctgc ttctttttct tcggcggtgg cgcggacgaa ctggtcgtaa
    11821 atttcggcat aaagcatatc gttcgggcct tcaaaaatcg tgaagggacg gatgtcgata
    11881 gcgatattgc cggcggtgtg tccgcgttca aaacccttcg cgcccaaaag tttttgcaac
    11941 atttgcgcgg cggcgtaagt gtattccgtg gcgagggttt tgacgatgtt cgcctccatc
    12001 agctgatggg cgacgggtgc aacgggcgaa acggaatggc agacgtagcg gtaaagaatc
    12061 tcggaaacct gatggcggcg ccggatttcg cggcgttcgt aatcgacgaa tctgatgtcg
    12121 ttgcggacgt atcgttccag gttttcaagg atgtattcca taatgccgtg cgtcatgccg
    12181 atcagttgca ggcggctgcg gataaagatg ttttggaacg cgcgcaaacc tgcggcgtcg
    12241 ctctgggaga gtttcatcac ggcggttgca ggcatttcgg catcgatgcg gttgacggcg
    12301 taacggacgg cgcgcaagcc ttcggatgcg agggtttcgc agcggatgta tgttttgggg
    12361 acgagcagca ggtcgatgac tttggcgagt ttgccgtttt tgcgttcttt ggcggcaacg
    12421 aggaggaagt cgctttgcga gttgccctgc cagtattttg cggcgttgac gtaaatggtt
    12481 tgtccgtcgg tatattcgta gtaagactgc atttctcggg caatcgccgc gccggaggtt
    12541 tcgggttcgg taacgcccaa accgccgccc tcgcctttga aaaccatgtc caaaccctgt
    12601 gcgatttgcg cttcatcgcc gaactcttgc agtggctgca acaccagcgc gccttcgatg
    12661 ccggtacgca gcgtaacggg tacgccgtaa tgccccgcaa tccgcaatac ttcctgaatt
    12721 tcaaactggc tgcccttgcg gccgccgtgt cttttgtcga ggaagggcaa cagcaaaccc
    12781 gcctgcttca aggcaagcca tttgtcttcg ggcaggtatc gcatcaggtc gataccgtct
    12841 gaaaaaatgc ggcggaatgc ggattcgatg tgctttaaaa aagcagccgt gtccatagtt
    12901 gacggctgcg cgctcggttc ggtgtgtatc atcggcttcc tctgtcggtt cccattaatc
    12961 ggcggccggt caaaccgcct gccacagttt agagttgatt ttctaaactt taccacaaag
    13021 tgcgccgggc aacaatccgc cggcttttca gacggcatcg cgcaccctcc cgtgctaaaa
    13081 tgaccgtttg catcactgtc cgccgattgc cgcactatga cctaccccat ccccaaaccc
    13141 cgtgaaaaat cccgttggcc caatctttcg caaggctcgc tgcccttggc tttggcgcgt
    13201 tatctgccgc acaagcggct caaggtcgtg ctgacccaag atgcggaaca ggcgttgcgc
    13261 cttcagacgg catggcggtt tttccgtccg cacgacacgg cggtgttctt gccggactgg
    13321 gaaacgctgc cttacgagcg tttttctccg catcaggatt tggtgtcgga gcggctctcg
    13381 gcgttgtggc agattaagag cggcgcggcg gacgtgttgt ttgtgccggt tgccacggcg
    13441 atgcagaagc tgccgcccgt gccgtttttg gcggggcgca cgttttggct gaaaacagga
    13501 cagactttgg atataggccg tctgaaaacc gatttggtag atgcgggcta caaccatgtt
    13561 tcccatgttg ttgcggcggg cgagtttgcc gtgcgcggcg gcattgtcga tttgttcccc
    13621 atgggcagcg aaatgcccta ccgcatcgat ttgtttgacg atgaaatcga cagcatcaaa
    13681 acctttgata cggacacgca gcgcaccatc tcccccgttt ccgaaatccg cctgctgccg
    13741 gcgcacgaat tccccaccga cagcgaggcg caaaaaatct tccgcagccg cttccgcgag
    13801 gaagtcgatg gtaatccgaa cgatgcggct gtatacaaag cagtaagcaa cggccacttc
    13861 ggtgcgggcg tggaatatta cctgccgctg ttttttgaaa acgagctgga aacgctgttt
    13921 gactatatcg gcgaagacgc gctgtttgtc tctttgggcg atgttcacgc cgaggcaaac
    13981 cgcttttgga gcgacgtcaa atcgcgttac gccatggcgc agggcgacga aacctatccg
    14041 cctttgcttc cacagcattt gtatctctct gccgatgttt ttgcaggccg tctgaaaaac
    14101 tacggacagg tgctgcccga tgtttccggc aaggaacacg ccctccccga ccttgccgtc
    14161 aaccgacaat ccgacgagcc tttgcaggca ttgaaggatt ttcagacggc gtttgaagga
    14221 cggattttgc tgtgcgccga aagtttggga cggcgcgaaa ccatgctcgg cttcttgcag
    14281 caaaacggtt taaaagccaa aagcgtgtct gattggcaag gcttcttgtc ggcacatgag
    14341 ccgctgatga ttacagtggc accgttggct tacggattca aactgggcgg attgcaatcc
    14401 ccgaaccagc agcaaactac ttccgcctcc gaaggagaag gcgatgcggt taccgaccaa
    14461 accgaatttt ccgcatccgc aacaaaccct ctccctagcc ctctcccaca ggagagggaa
    14521 caaagtgcag ccgccgtttc agacagtctg aaagcagccg ccgtttcaac cgaaagcagc
    14581 ctgcccctcg gtacaagtaa tctgcacggg caaatccgac agcaacctgc cccttccccc
    14641 gtgggggagg gttggggaga gggcaaagca gttgccgctc aaaccgaatt tcccgcatcc
    14701 gcaacaaacc ctctccctag ccctctccca caggagaggg aacaaagtgc agccgccgtt
    14761 tcagacgacc tgaaaaccaa aagcagcctg catcccgtcg caaataatct gcacgggcaa
    14821 atccgacagc aacctactcc ctcccccgtg ggggagggtt ggggagaggg caaagcagtt
    14881 gccgctcaaa ccgaattttc cgcagccgca acaaaacctc tccctagccc tctcccacag
    14941 gagagggaac aaagtgcagc cgtcgtttca gacagtctga aagcagccgc cgtttcaacc
    15001 gaaagcagcc tgccccccgg taaaagtaat ctgcacgggc aaatccaaca gcaacctgcc
    15061 ccctcccccg tgggggaggg ttggggagag ggcaaagcag ttgccgctca aagtgccatc
    15121 gccgtcatca ccgaatccga tctctaccaa tacgtcgccc gttcgcgcgt ccacaaccgc
    15181 cgcaagaaac acgccgccgt ttcagacggt ctgttgcgcg accttgccga aatcaacatc
    15241 ggcgaccccg tcgttcacga agaacacggc atcgggcggt atatgggctt gatcacaatg
    15301 gatttgggcg gcgaaaccaa cgaaatgatg ttgcttgaat atgcaggcga agcgcagctt
    15361 tatgtgcctg tttcgcaact gcatttaatc agccgctact ccggtcaggc gcatgaaaac
    15421 gtcgccctgc acaagctcgg cagcggcgcg tggaacaaag cgaaacgcaa agccgccgaa
    15481 aaagcgcgcg ataccgccgc cgagttgctc aacctctacg cccaacgcgc tgcccaatcg
    15541 ggacacaagt ttgaaatcaa cgagttggac tatcaggcgt ttgccgacgg tttcggctac
    15601 gaggaaaccg aagaccaggc cgccgccatc gccgccgtga ttaaagacct gacacaggcg
    15661 aagccgatgg accgactcgt gtgcggcgat gtcggctttg gcaaaaccga agtcgccctg
    15721 cgcgccgcgt ttgtggcggt gatgggcggc aaacaggtcg ccgtactcgc cccaaccacg
    15781 cttctagtcg agcagcacgc gcaaaacttt gccgaccgtt tcgccgattt ccccgtgaaa
    15841 gtcgccagcc tttcgcgttt caacaacagc aaagccacca aagccgcact ggaaggcttg
    15901 gcggacggca cggtcgacat cgttatcggc acgcacaaat tggtgcagga caacatcaga
    15961 ttcaaaagct taggtttagt gattatcgat gaagaacacc gcttcggcgt gcgccagaaa
    16021 gaacagctca aacgcctgcg cgccaatgtc gatatcctta ccatgaccgc cacgccgatt
    16081 ccgcgcaccc tcagcatggc actcgaaggc ctgcgcgact tctcgctgat taccaccgcg
    16141 cccagccgcc gcctcgccgt gaaaaccttt gtcaaaccgt tcagcgaagg cagcgtgcgc
    16201 gaagccgtgt tgcgcgaact caaacgcgga ggacaggtat ttttcctgca caatgaagta
    16261 gatacgattg aaaatatgcg cgagcggctg gaaaccctgc tgcccgaagc ccgcatcggc
    16321 gtggcgcacg gacaactgcg cgagcgcgag ctggaacaag tcatgcgcga ctttttacag
    16381 caacgattca acgtgttgct ctgttccacc atcatcgaaa ccggtatcga cattcccaac
    16441 gccaacacca tcatcatcaa ccgcgccgac aaattcggac tggcgcaact gcaccagctt
    16501 cgcgggcgcg tcggacgcag ccaccaccaa gcctacgcct acctgctcac gcccgaatac
    16561 atcaccaaag acgcagaaaa acgcctcgac gccatcgcgg cagcagacga actcggcgca
    16621 ggtttcaccc tcgccatgca ggatttggaa atccgcggcg caggcgaaat cctcggcgaa
    16681 gggcagtccg gcgaaatgat acaggtcggc ttcacgctct acaccgaaat gctcaaacaa
    16741 gccgtgcgcg atctcaaaaa aggccgccaa cccgacctcg acgcgccgct gggcatcacc
    16801 accgaaatca aactgcacag ccccgcccta ctgcccgaaa gctactgccc cgacatccac
    16861 gagcgtctcg tcctctacaa acgcctcgcc gtctgcgaaa ccgtgcagca aatcaacgcc
    16921 atacacgaag aactcgtcga ccgcttcggc ctgcccgaac aacccgtcaa aacccttatc
    16981 gaaagccacc acctgcggct tatggcaaaa gaattgggta tcgatgccat tgatgcggcc
    17041 ggcgaagcgg taacggtaac cttcggtaaa aacaataatg tcgatccaac cgaaatcatc
    17101 ctgctgattc agaacgacaa aaaataccgc cttgccggcg ccgataagct gcggtttacc
    17161 gcagagatgg aaaatatcga ggtcagaatc aacaccgtaa aaaacgtttt aaaaaccttg
    17221 caaaacagat gcctgcccaa ataaagccga caccgcaatg ccgtctgaaa caccgttttc
    17281 cttgtccgaa agccgccatt atgaatttga aggaaactcc actataatac ggcattcaga
    17341 tctccagacg gcatcgcgcc cgtcagaccg cacacaaacc aaaaggaaat acatgttccg
    17401 tactatgctt ggcggaaaaa tccaccgcgc caccgttacc gaagccgatt tgaactacgt
    17461 cggcagtatt accgtcgatc aagacctgtt agacgcagca ggcatctacc ccaacgaaaa
    17521 agtcgccatc gtcaacaaca acaacggcga acgttttgaa acctatacca tttcaggcaa
    17581 acgcggcagc ggcgtggtct gcctgaacgg ggcggcggcc aggctggtac agaaaggcga
    17641 tatcgtcatc atcatgtctt acgtccaact ctccgaaccc gaaatcgccg cacacgaacc
    17701 caaagtcgtc ttggtagacg gaaacaacaa aatccgcgac atcatctcct acgagccgcc
    17761 gcacaccgtg ctgtaaccct gaaaacggac attgaccatg gatattaaaa tcaacggcat
    17821 taccgtcggt aacgatgctc ctttcgtact gttcggcggc atcaacgttt tagaagattt
    17881 ggattccacc ctccaaacct gtgcgcatta cgtcgaagtt acccgaaaac tcggtattcc
    17941 ctatatcttt aaagcctctt tcgacaaggc aaaccgttcc tccatccatt cttatcgcgg
    18001 cgtaggcttg gaagaaggct taaagatttt tgaaaaagtc aaagcagagt tcggcatccc
    18061 cgtcattacc gacgtacacg aaccccatca gtgccaaccc gtcgccgaag tgtgcgatgt
    18121 catccagctt cccgcctttc ttgcgcggca gaccgatttg gtggccgcaa tggcggaaac
    18181 gggcaatgtc atcaacatca aaaaacccca gttcctcagc ccttcgcaaa tgaaaaacat
    18241 cgtggaaaaa ttccgcgaag ccggcaacgg gaaactgatt ttatgcgaac gcggcagcag
    18301 cttcggctac gacaacctcg ttgtcgatat gctcggtttc ggcgtgatga aacaaacctg
    18361 cggcaacctg ccggttattt tcgacgttac ccattccctg caaacccgcg atgccggttc
    18421 tgccgcatcc ggcggtcgtc gcgcacaggc tttggatttg gcacttgcag gcatggcaac
    18481 ccgccttgcc ggcctgttcc tcgaatcgca ccccgatccg aaactggcaa aatgcgacgg
    18541 ccccagcgcg ctgccgctgc accttttaga agatttttta atccgcatca aagcattgga
    18601 cgatttaatc aaatcacaac cgattttaac aatcgagtaa cacggtttcg ccttatgatg
    18661 cagactttcc gaaaaatcag cctgtatgcc gcaaccttgt ggctcggtat gcagattatg
    18721 gcgggttata tcgtcgcgcc ggtgctgttc aaaatgctgc ccaaaatgca ggcgggcgaa
    18781 attgccagcg tattgttcga catcctctct tggagcgggc ttgccgtttg gggcgcggta
    18841 ctggctgccg cctttgccgc cctaacccgg cggcaaaccg ccctgctgct ttttttattg
    18901 tccgcccttg ccgccaaccg attcttgatt acacccgtta tcgaggcgct gaaatacggg
    18961 catgagaatt ggctgttgtc gtttgtaggc ggatccttcg gaatgtggca cggcatttcc
    19021 agtattgttt ttatggcaac cgccctactt tcagcagttt taagttggcg gctttccggc
    19081 aaagaggccg tctgaagccc tcccattttt tacctccctt cacttcactt ggagaacatt
    19141 catgagcgca atcgttgata ttttcgcccg cgaaattttg gactcacgcg gcaaccccac
    19201 agtcgagtgt gatgtattgc tcgaatccgg cgtaatggga cgtgcagccg taccgagcgg
    19261 tgcgtccacc ggtcaaaaag aggctttgga actgcgcgac ggcgacaaat cccgttattc
    19321 gggcaagggc gtattgaagg cggtcgaaca cgtcaacaac caaatcgccc aagccctcat
    19381 tggtatcgat gccagcgaac aatcttatat cgaccaaatc atgatcgaat tggacggtac
    19441 tgaaaacaaa ggtaacttgg gtgccaacgc gactttggcc gtttctatgg ccgtagcacg
    19501 cgcagccgct gaagatgcag ggctgccgct ttaccgctac ttgggcggcg caggtccgat
    19561 gtccctgccc gtaccgatga tgaacgtcat caacggcggc gaacacgcca acaacagcct
    19621 gaacatccaa gagtttatga ttatgcccgt cggcgcaaaa tctttccgcg aagcgttgcg
    19681 ctgcggtgcg gaaattttcc acgccttgaa aaaactgtgc gacagcaaag gcttcccgac
    19741 cacagtcggc gacgaaggcg gtttcgcccc caacctgaac agccacaaag aagccctgca
    19801 actgatggtc gaggcgaccg aagccgccgg ctacaaagcg ggcgaagacg tattattcgc
    19861 attggactgc gcctccagcg agttctacaa agacggcaaa taccacttgg aagccgaagg
    19921 ccgctcctac accaacgcgg aatttgccga atatctggaa agtctggtca acgagttccc
    19981 catcatctcc atcgaagacg gcatggatga aaacgactgg gaaggctgga aactgctgac
    20041 cgaaaaactg ggcggcaaag tccaactcgt tggcgacgac ctcttcgtta ccaacccgaa
    20101 aatccttgcc gaaggcattg aaaaaggcgt ggcaaacgca ctattggtca aagtcaacca
    20161 aatcggtact ttgagtgaaa ccctgaaagc cgtcgactta gccaaacgca accgctacgc
    20221 cagcgtaatg agccaccgct ccggcgaaac cgaagacagc accattgccg acttggcagt
    20281 cgccaccaac tgtatgcaga tcaaaaccgg ttctttgagc cgttccgacc gcatggcgaa
    20341 atacaaccaa ctgctgcgta tcgaggaaga attggcggaa gccgccgact accccggcaa
    20401 agccgcattc taccaactgg gcaaataaaa aaggttaagg tatgaagtgg gtaactgtcg
    20461 ttttatcctt cgcacttgtc tgttgccaat acagcctctg gttcggcaaa ggcagcatcg
    20521 gacgcaacag cagtctgaga gaacagattg ccgttcaaga agaaaaaaac cagacactcg
    20581 ccctacgcaa tcattccctt gccgccgaag tctatgattt ggaaaacggt caagaagcca
    20641 tttcggaaat cgcccgggta gaactgggtt atatccaaga cggtgaaacc ttttaccgac
    20701 tcatcaggca taaccggtaa taccgtcaaa aagccgtccg aaccaatgtt cggacggctt
    20761 ttatttcaac aaactgtcag acagcccctc atcctccccc gacaaaccgc aatccagcct
    20821 gacatccccc tcgacgtaac agcagcacgg cagtatctcg tcccgcccca aaaaagccaa
    20881 aggcggcttc cgataagtaa cgcttccctc caaaatcttc acccggcacg atccgcaata
    20941 tccgcttcgg cactgatatt ccaccatatg ccccgtccgt tccaagcctt ccaacagggt
    21001 ctcgccctcc aagagctcaa aaaaaccctt attcgtacca atgcgcgcca tttccgacca
    21061 atca
//
LOCUS       DAWGKF010000018        20705 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.018, whole genome shotgun sequence.
ACCESSION   DAWGKF010000018 DAWGKF010000000
VERSION     DAWGKF010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20705)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20705)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20705
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.018"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(63..239)
                     /locus_tag="WHR07_000470"
     CDS             complement(63..239)
                     /locus_tag="WHR07_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129726.1"
                     /translation="MKSRRFFKALLLIAALVGAFYAGMRTQAYLYEDLCLDLGGGKNP
                     GSYPICVIGKVPAR"
     gene            complement(242..1600)
                     /locus_tag="WHR07_000471"
     CDS             complement(242..1600)
                     /locus_tag="WHR07_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HEZ2129727.1"
                     /translation="MKPLDLNFICQALKLPMPSENKPVSRIVTDSRDIREGDVFFALA
                     GGRFDAHDFVGGVLSAGAAAVVVSREDCAALGGALKVDDTLAALQTLAKAWRDNVNPF
                     VFGITGSGGKTTVKEMLAAVLRRRFGDDAVSATAGNFNNHIGLPLTLLKLNEKHRYAV
                     IEMGMNHFGELAVLTQIAKPDAALVNNALRAHVGCGFDGVGDIAKAKSEIYAGLCSDG
                     MALIPQEDANMAVFKTATFNLNTCTFGVDSGDVRAENIVLKPLSCEFDLVCGDERTAV
                     VLPVPGRHNVHNAAAAAALALAAGLSLNDVAEGLQGFSNIKGRLNVKAGIKGATLIDD
                     TYNANPDSMKAAVDVLARMPAPRIFVMGDMGELGEDEAAAMHAEVGAYARDQGIEAAY
                     FVGDNSVEAAEKFGADGLWFAAKDPLIQVLSHDLPERATVLVKGSRFMQMEEVVEALE
                     DK"
     gene            complement(1725..3372)
                     /locus_tag="WHR07_000472"
                     /pseudo
     CDS             complement(1725..3372)
                     /locus_tag="WHR07_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212487.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
     gene            complement(3395..4873)
                     /locus_tag="WHR07_000473"
     CDS             complement(3395..4873)
                     /locus_tag="WHR07_000473"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEZ2129728.1"
                     /translation="MFSKLTPLAETGIPTLSCANAVGRLLHSDSRQIKQGDIFVACPG
                     EYADGRSYIPAAVANGAAFVFWDDDGKFAWNPEWKVPNQGIKDLKHRAGILAAQVYGN
                     VSDGLKVWGVTGTNGKTSITQWLAQAADLLGEKTAIVGTVGNGFWGALEETTHTTPAP
                     VDVQTLLYRFRQQGATVAAMEVSSHGLDQSRVNGVSFRSAIFTNLTRDHLDYHGTMEA
                     YGAIKSRLFYWHGLKHAVINVDDEYGAELVGRLKKDCPDLAVYSYGFSEHADIRIIDF
                     TASSDGIAAVFQTPWGEGKCRTRLLGRFNAQNLAACIALLCANGYPLDNVLDVLAKIR
                     PASGRMDCIMNSGKPLVVVDYAHTPDALEKALATLQEIKPQGAALWCVFGCGGNRDRG
                     KRPLMGAAAVQGADKVVVTSDNPRLENPHDIINDILPAVPAPECVEADRAAAIRYAVE
                     QAAANDIILIAGKGHENYQDVQGVKHRFSDLEIVGQALLTRK"
     gene            complement(4898..6643)
                     /locus_tag="WHR07_000474"
     CDS             complement(4898..6643)
                     /locus_tag="WHR07_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEZ2129729.1"
                     /translation="MLIKSEYKPRMLPKEEQVKKPMTSNGRISFVLMAIAVLFAGLIA
                     RGLYLQTVTYNFLKEQGDNRIVRTQTLPATRGTVSDRNGAVLALSAPTESLFAVPKEM
                     KEMPSAAQLERLSELVDVPVDVLRNKLEQKGKSFIWIKRQLDPKVAEEVKALGLENFV
                     FEKELKRHYPMGNLFAHVIGFTDIDGKGQEGLELSLEDSLHGEDGAEVVLRDRQGNIV
                     DSLDSPRNKAPKNGKDIILSLDQRIQTLAYEELNKAVEYHQAKAGTVVVLDARTGEIL
                     ALANTPAYDPNRPGRADSEQRRNRAVTDMIEPGSAIKPFVIAKALDAGKTDLNERLNT
                     QPYKIGPSPVRDTHVYPSLDVRGIMQKSSNVGTSKLSARFGAEEMYDFYHELGIGVRM
                     HSGFPGETAGLLRNWRRWRPIEQATMSFGYGLQLSLLQLARAYTALTHDGVLLPVSFE
                     KQAVAPQGKRIFKESTAREVRNLMVSVTEPGGTGTAGAVDGFDVGAKTGTARKFVNGR
                     YADNKHIATFIGFAPAKNPRVIVAVTIDEPTAHGYYGGVVAGPPFKKIMGGSLNILGI
                     SPTKPLTAAAVKTPS"
     gene            complement(6704..6967)
                     /gene="ftsL"
                     /locus_tag="WHR07_000475"
     CDS             complement(6704..6967)
                     /gene="ftsL"
                     /locus_tag="WHR07_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HEZ2129730.1"
                     /translation="MNKLNFLLLLAVCVSAFSVVMQQNQYRLNFTALDKAKKQEIALE
                     QDYAQMRLQQARLANHEAIRAAAEKQNLHPPVSGNTFMVAHQR"
     gene            complement(6964..7950)
                     /gene="rsmH"
                     /locus_tag="WHR07_000476"
     CDS             complement(6964..7950)
                     /gene="rsmH"
                     /locus_tag="WHR07_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEZ2129731.1"
                     /translation="MSGAESYRHITVLLNEAVDALAVREDGVYVDGTFGRGGHSRLIL
                     SRLGDAGRLIVFDKDPQAIAVAEELARSDKRVGVVHGGFASFQAALDGLGIGKVDGAL
                     FDLGISSPQIDDGSRGFSFRFDAPLDMRMDTTRGMSAAEWIAVASEQDLHEVIKNYGE
                     ERFSRQIARAIVAQRAESPIDTTRKLAQIVAQNVRTRERGQDPATRTFQAVRIFINRE
                     LEEVGAVLPQVMCRLKEGGRLAVIAFHSLEDRIVKQFVKKYSQHAPLPRWAAVREADL
                     PELPLKIVGRALKPGEAEIAANPRARSAVLRVAERTAGSIPEQSQRKTSEWQ"
     gene            complement(7947..8402)
                     /gene="mraZ"
                     /locus_tag="WHR07_000477"
     CDS             complement(7947..8402)
                     /gene="mraZ"
                     /locus_tag="WHR07_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HEZ2129732.1"
                     /translation="MFGGAHELSIDSKGRLAVPAKFRDILSRLYTPAVVVTLESKHKL
                     LMYPVAEWEKVAAQLLNLKVADNPVLRRFQNLLLHNAEILEWDSAGRVLVPAGLRKRV
                     DFDREVVLVGRANRLELWGREQWEAEMVQALDDDPDELAFQLSQTDLQL"
     gene            8681..9898
                     /locus_tag="WHR07_000478"
     CDS             8681..9898
                     /locus_tag="WHR07_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ2129733.1"
                     /translation="MTAPVPTCNMSGNPINLHKLTLIMPLPLPSPEARQFSLKLQTLI
                     AEKIGKHGNWIPFSRFMELVLYAPQYGYYTGGSHKIGNTGDFITAPTLTSLFAQTLAR
                     QLQELLSQTAGNIYEFGAGTGQLAADLLGSISDGISRYYIIEISPELAARQKNLIQAR
                     APEASQKVVHLTALPEAFDGIIIGNEVLDAIPVEIVRKDEGGSFEHVGVCTDNGRFAY
                     SARPLHDPSLSTSASLYFPQTDYPYTSELHPQQYAFIRTLASRLEHGCMIFIDYGFDA
                     AQYYHPQRNQGTLIGHYRHHVIHNPFDFIGLADLTAHVNFTDIAQAGTDAGLDLIGYL
                     PQSHFLLNLGITELLAQTGKTNSAAYIREAAAVQKLIDQHEMGELFKVIAFGKNIGVD
                     WAGFRFGDICHKL"
     gene            10030..10106
                     /locus_tag="WHR07_000479"
     tRNA            10030..10106
                     /locus_tag="WHR07_000479"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10064..10066,aa:Met,seq:cat)
     gene            10114..10189
                     /locus_tag="WHR07_000480"
     tRNA            10114..10189
                     /locus_tag="WHR07_000480"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10147..10149,aa:Ala,seq:ggc)
     gene            complement(10471..11292)
                     /locus_tag="WHR07_000481"
     CDS             complement(10471..11292)
                     /locus_tag="WHR07_000481"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEZ2129734.1"
                     /translation="MDFLIVLKALMMGLVEGFTEFLPISSTGHLIVFGNLIDFHSNHK
                     VFEITIQLGAVLAVVFEYRQRFSNVLHGVGKDRKANRFVLNLAIAFIPAAVMGLLFGK
                     QIKEYLFNPLSVAVMLVLGGFFILWVEKRQSRAEPKIVDVDALRPIDALMIGVAQVFA
                     LVPGTSRSGSTIMGGMLWGIERKTATEFSFFLAVPMMVAATAYDVLKHYRFFTLHDVG
                     LILIGFIAAFVSGLVAVKALLRFVSKKNYIPFAYYRIVFGIAIIILWLSGWISWE"
     gene            complement(11325..11969)
                     /locus_tag="WHR07_000482"
     CDS             complement(11325..11969)
                     /locus_tag="WHR07_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEZ2129735.1"
                     /translation="MKLKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQKQSGKIE
                     VLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHVVWQPEMLGLARMAAAVKLSGL
                     KYQANPAVFKAVYEQKIRLENRSVAEKWALSQKGFDGKKLMRAYDSPAAAAAASKMQQ
                     LTEQYRIDSTPTVVVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK"
     gene            complement(11972..12835)
                     /gene="ftsN"
                     /locus_tag="WHR07_000483"
     CDS             complement(11972..12835)
                     /gene="ftsN"
                     /locus_tag="WHR07_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HEZ2129736.1"
                     /translation="MNKFSQSGKGLSGFFFGLILATVIIAGILFYLNQSGQNAFKIPA
                     SSKQPAETEILKPKNQPKEDIQPEPADQNALSEPDAATEAEQSDAEKAADKQPVADKA
                     DEVEEKAGEPEREEPDGQAVRKKALTEEREQTVREKAQKKDAETVKKQAVKPSKETEK
                     KASKEEKKAEKEKVAPKPTPEQILNSGSIEKARSAAAKEVQKMKTSDKAEATHYLQMG
                     AYADRRSAEGQRAKLAILGIYSKVVGYQAGHKTLYRVQSGNMSADAVKKMQDELKKHE
                     VASLIRSIESK"
     gene            complement(12941..14437)
                     /locus_tag="WHR07_000484"
     CDS             complement(12941..14437)
                     /locus_tag="WHR07_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HEZ2129737.1"
                     /translation="MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKE
                     SRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGRFDLPIAIGILAASGQVAPEKLA
                     EYEFAGELALSGLLRPVRGALAMAWQGMQAKRAFVLPEENAGQAAVMRGITVYGARSL
                     GEVAAHLNGIEPLAQTECQVPQMPFEHGGQPDLCDVKGQHTARLALEIAAAGGHSLLM
                     MGPPGTGKSMLSQRLPGILPPLTEDELVEVWALRSLLPNHQQQLDSHRPFRSPHHSAS
                     AAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPLENGEIHISRAARQA
                     VYPAKFQLVAAMNPCPCGYLGHPVKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSL
                     SAAELMQQEAGESSASVLERVIAARDKQYARQGKVNAALSVSELDTSARIQKEAQEAL
                     GGLLEKLSLSARSFHRIMRVARTLADLAGDEEVGRSHVMKAIGFRRAL"
     gene            complement(14451..14771)
                     /locus_tag="WHR07_000485"
     CDS             complement(14451..14771)
                     /locus_tag="WHR07_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003763371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HEZ2129738.1"
                     /translation="MFGKQLFEEVGSKISETIANSPAKDVEKNIKAMLGGAFNRMDLV
                     TREEFDIQQQVLIKTRTKLAALEARLAKLEAAQNPERAALEAAEAAAEEAVAEIRQQT
                     EAGE"
     gene            15254..16780
                     /gene="putP"
                     /locus_tag="WHR07_000486"
     CDS             15254..16780
                     /gene="putP"
                     /locus_tag="WHR07_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HEZ2129739.1"
                     /translation="MNPMYITFAIYLVAVLLIGLAAYFSTRNFDDYILGGRSLGPFVT
                     AMSAGASDMSGWLLMGLPGAIYLSGLNEAWIAIGLLVGAYFNWLLVAGRLRVHTEYAN
                     NALTLPDYFFHRFGAGGHLMKVVSALIILFFFTIYCASGIVAGATLFQSLFEGMTYNQ
                     AMWLGAGATIAYTFLGGFLAVSWTDTLQASLMIFALILTPVMVYLGLGGAEQMSAAIQ
                     SVAAGTGKEYGSLFAGTTVIGIISTAAWGLGYFGQPHILARFMAAESAKSLVSARRIG
                     MTWMALCLAGAVAVGYFGIAYFGANPDKVSSMSGNHERIFIALSTLLFNPWIAGIILS
                     AILAAVMSTLSCQLLVCSSAITEDFYKGFLRKNAQQSELVWVGRLMVLAIAVISILIA
                     SDPNSKVLGLVSYAWAGFGAAFGPIVILSVLWKRITAYGALSGMVAGALTVVVWAEWV
                     KKPAQAAGESGLLTMYEIVPGFIVCLIVAVLVSLFNKEPSRETQERFEKADADYRAAR
                     "
     gene            complement(16870..17037)
                     /locus_tag="WHR07_000487"
     CDS             complement(16870..17037)
                     /locus_tag="WHR07_000487"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129740.1"
                     /translation="MKHFLDSPKFFGGQAASVRPEYGNIVINPQMKYKASNAGRVGAS
                     VSLKMKRVKHK"
     gene            17029..20634
                     /gene="putA"
                     /locus_tag="WHR07_000488"
     CDS             17029..20634
                     /gene="putA"
                     /locus_tag="WHR07_000488"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HEZ2129741.1"
                     /translation="MFHFAFPAQTALRQAITDAYRRNEIEAVQDMLQRAQMSDEERNA
                     ASELARRLVTQVRAGRTKAGGVDALMHEFSLSSEEGIALMCLAEALLRIPDNATRDRL
                     IADKISDGNWKSHLNNSPSLFVNAAAWGLLITGKLTATNDKQMSSALSRLISKGGAPL
                     IRQGVNYAMRLLGKQFVTGQTIEEALQNGKEREKMGYRFSFDMLGEAAYTQADADRYY
                     RDYVEAIHAIGKDAAGQGVYEGNGISVKLSAIHPRYSRAQHCRVMGELLPRLKELFLL
                     GKKYDIGINIDAEEANRLELSLDLMEALVSDPDLAGYKGIGFVVQAYQKRCPFVIDYL
                     IDLARRNNQKLMIRLVKGAYWDSEIKWAQVDGLNGYPTYTRKVHTDISYLACARKLLS
                     AQDAVFPQFATHNAYTLGAIYQMGKGKDFEHQCLHGMGETLYDQVVGPQNLGRRVRVY
                     APVGTHETLLAYLVRRLLENGANSSFVNQIVDENISIDTLIRSPFDTIAEQGIHLHNA
                     LPLPRDLYGKCRLNSQGVDLSNENVLQQLQEQMNKAAAQDFHAASIVNGKARDVGEAQ
                     PIKNPADHDDIVGTVSFADAALAQEAVGAAVAAFPEWSATPAAERAACLRRFADLLEQ
                     HTPALMMLAVREAGKTLNNAIAEVREAVDFCRYYANEAEHTLPQDAKAVGAIVAISPW
                     NFPLAIFTGEVVSALAAGNTVIAKPAEQTSLIAGYAVSLMHEAGIPTSALQLVLGAGD
                     VGTALTNDARIGGVIFTGSTEVARLINKALAKRGDNPVLIAETGGQNAMIVDSTALAE
                     QVCADVLNSAFDSAGQRCSALRILCVQEDVADRMLDMIKGAMDELVVGKPIQLTTDVG
                     PVIDAEAQQNLLNHINKMKGVAKSYHEVKTAADVDSKKSTFVRPILFELNNLNELQRE
                     VFGPVLHVVRYRADELDNVIDQINSKGYALTHGVHSRIEGTVRHIRSRIEAGNVYVNR
                     NIVGAVVGVQPFGGHGLSGTGPKAGGSFYLQKLTRAGEWVAPTLSQIGQADEAALKRL
                     EALVHKLPFNAEEKKAAAAALGHARIRTLRRAETVLTGPTGERNSISWHAPKRVWIHG
                     GNTVQAFAALTELAASGVQAVVEPDSPLASYTADLEGLLLVNDKPETAGISHVAALSP
                     LDSARKQELAAHDGALIRILPSENGLDILQVFEEISCSVNTTAAGGNASLMAVAD"
BASE COUNT         4840 a         6007 c         5052 g         4806 t
ORIGIN      
        1 cgggcctgcg cccgtttgag gttggcttgc cgcccggcaa ggtttcggac gacttttgca
       61 gattaacgtg cagggacttt cccaatcacg caaatcgggt agctccccgg atttttgccg
      121 ccgcccaagt ctaaacataa atcttcataa agatacgcct gcgtccgcat tccggcataa
      181 aacgcgccga ccagcgcggc aatcagcaat aaggctttaa aaaaacgtcg gcttttcatt
      241 ttcacttatc ctccaatgcc tcgaccactt cttccatctg cataaagcgc gaacctttca
      301 ccaacacggt ggcgcgttcg ggcaaatcgt ggctcaacac ttgaatcaac gggtctttgg
      361 cggcgaacca caaaccgtcc gcgccaaatt tttccgccgc ttcgacgctg ttgtcgccga
      421 caaaataagc cgcttcgatg ccttggtcgc gggcgtacgc gccgacttcg gcgtgcatgg
      481 cggcggcttc gtcctcgccc agttcgccca tatcgcccat cacgaaaatg cgcggcgcag
      541 gcatacgcgc caacacgtca accgcggctt tcatactgtc gggattcgca ttataagtat
      601 cgtcaatcag ggttgcgccc ttgatgccgg ctttgacgtt cagacggcct ttgatgttgc
      661 tgaagccttg caaaccttcc gccacatcgt tcaaactcaa accggcagcc aaagccagcg
      721 cggcggcagc ggcggcgttg tggacattgt ggcggccggg aacaggcagc accacggcag
      781 tgcgctcgtc gccgcacacc aaatcaaatt cgcacgacaa aggtttcagc acgatatttt
      841 ccgcgcggac atcgccgcta tcgacgccga aagtgcacgt attcaaatta aacgttgccg
      901 ttttgaagac agccatattg gcatcttctt gaggaatcag tgccatgccg tctgaacata
      961 agcctgcata aatctcgctt ttcgctttgg caatatcgcc cactccgtcg aaaccgcatc
     1021 cgacatgggc gcgcagggcg ttgttgacca aagcggcatc gggtttggcg atttgcgtta
     1081 aaaccgccag ttcgccaaaa tggttcatgc ccatttcaat cacggcatag cggtgttttt
     1141 cgtttaattt caataaagtc agcggcaatc cgatgtggtt gttgaagttg cctgccgtcg
     1201 ccgaaacggc atcatcgccg aaacggcggc gcaataccgc agccagcatc tccttcaccg
     1261 tcgtcttgcc gcccgaaccg gtaatgccga acacaaacgg gttcacatta tcgcgccacg
     1321 ccttcgccaa cgtttgcaac gcggcaagcg tgtcatcgac tttcaacgcg ccgcccaaag
     1381 ccgcgcaatc ttcgcgcgaa accacaaccg ccgccgcgcc cgcagacaat acgcctccaa
     1441 caaaatcatg cgcgtcaaac cgcccgcccg ccaatgcgaa aaacacatcg ccttcccgaa
     1501 tatcgcggct gtcggttacg atgcgcgaca cgggtttgtt ttcagacggc atcggaagct
     1561 tgagggcttg gcagatgaaa tttaggtcca atggtttcat atttgctttc gttaatattc
     1621 gggcggcgga cacatcggta gcggctgatt tttttatcgc ctgttttgct gtggtaaaac
     1681 acagattatt ttcccattct cattcggcat tttttctgta cgtatcattt tttagacgta
     1741 tttttagccg atttgccttt tcccgcatac cacggcgcgg ggtcgtcgga ctgtctgtcg
     1801 ataaaggcaa ggttattgcc ttcgcccggc acatcgggga cattccccca aaaatcatag
     1861 ccgtcatcgg gcaactcgtc ggtttcgata cccgtccaac tgccgaatcc gcgtaaaaaa
     1921 ttaaacgcgc tgcgcctcac tttaatcatt tcgcgccgcg tgtcatcgga cgaaatttta
     1981 accagcggca cgccgtagct ttgacgcttc cactcgccgt gtgtcaacgt tcgctcgccg
     2041 cctttgccga catgcatcaa accgtggtcg gaaaagtaaa ccaaagacca gctttcttta
     2101 ttttcattca atatcttaac cgtatcttct aaaaatttat cggtttgcgc gatggtggaa
     2161 acatagcagg atattttttc agtttgatac tgaaaccgcc gcgcatcctt atccaaacgt
     2221 gtgcaaaaat cactgtgcga acccatcagg tgcatcacaa tcagccgagg cttcgtgcct
     2281 gcatttcctg tcaaaacccg tttgaacgcc ggcaacaaaa ggcggtcgct caatcccgcg
     2341 cttttgccat aatcacccct ttgggtaaac cacggataat cgctgcgtag ggcataggtg
     2401 gaaatttcgt tggcaaaatg ccccaacatt ccttgattag acagccacgc cgtccgaaaa
     2461 ccagcctgct tcgccaagct gacaatgtta ttgttcggtt ctcccggcag ccccaaagtc
     2521 tgcggcagcg aaagattcgt cgcgtgggcg gtcgattggt aaccgtttat caacagccct
     2581 ttggtctgac tcaaaaaagg cgtatcgggc aatgggaaac cgtaaacatt catataatcc
     2641 gaacgcgcgc tctcaccgat aaccacaaca taatttttat acttgggcgc aacatgacgg
     2701 atatgccatg ttgacgcttt ttttgctgct tccaaaatgt gggcgcgctt ggcggcatat
     2761 tgtgccggcg cggaagccaa atcgtaatac aggtcgaaaa tattcaacaa caggccggca
     2821 tcaggttctc gcaaatcttt atcgctggcg attttatcca tcaccgcgca ggacaaaatc
     2881 aaagtcaata atatagtcag ccatattttg ctgcggcgtt tatagttttt tacgtcagca
     2941 aatacccccc cccgatacac aatatctcca aactgtcaag ccaaaaatga aaaataatgc
     3001 ctgcacaaaa taaagcgacc cgggaagatt gccgacaaat tcacgcgcct cggcaggatt
     3061 gctttccaat atcgaaccga ctatctgata agacggcgca ccatacagcc agccgaccgg
     3121 caaatatagg gcggttgtgc cgacgtaaat cagtaaaaca actgaagaaa cgcgcgggaa
     3181 accgcgtgcc aataataata aaaatacaac cgaagccaaa gcacccacgg cagaataacg
     3241 gtagccgtat tcatattcca agtgataacc tgatgcgatg gccgcgccaa aacaaaaggc
     3301 taaaagcgcg caaatgccca atgtattttt taatgtctga ttcatatttt ttattcgggc
     3361 ggattgtttc atacgatgcc gtccgaatat cccattattt acgagttaac aaagcctgtc
     3421 cgacgatttc aagatcggaa aaacggtgct tcacgccttg tacatcctga tagttttcat
     3481 gccctttgcc ggcaatcagg atgatgtcgt ttgcggcggc ttgttcaacc gcataacgga
     3541 tggcggcggc acggtcggct tcgacgcatt cgggcgcggg aacggcaggc aggatgtcgt
     3601 tgatgatgtc gtgcggattt tccaaacgcg gattgtcgct ggtgacgacg actttatccg
     3661 cgccctgtac ggctgccgcg cccatcagcg ggcgtttgcc gcgatcgcgg ttgccgccgc
     3721 aaccgaatac gcaccacaaa gccgcaccct gcggtttgat ttcctgcaag gtggcgagtg
     3781 ctttttccaa tgcgtcgggc gtatgggcat aatcgacaac gaccaaaggt ttgccgctgt
     3841 tcatgatgca gtccatgcgc cctgaagcgg gacggatttt tgccagcaca tccaatacat
     3901 tatcaagcgg atagccgttg gcgcacagca aggcgatgca ggcggcgagg ttttgcgcgt
     3961 tgaaccgtcc gagcaggcgc gtgcggcatt tcccttcgcc ccacggggtt tggaatacag
     4021 ctgctatgcc gtctgaagag gcggtgaaat cgataatgcg gatgtcggcg tgttcgctga
     4081 agccgtagct ataaacggcc aaatcgggac agtctttttt cagacgacct acgagttccg
     4141 cgccgtattc gtcatccacg ttgatgactg cgtgtttcaa gccgtgccag taaaacaggc
     4201 gcgacttgat ggcaccgtag gcttccatcg tgccgtggta gtcgaggtgg tcgcgggtga
     4261 ggttggtaaa gattgcgctg cggaatgaca cgccgttgac gcgcgactgg tcaagcccgt
     4321 ggctggagac ttccatcgcg gcgactgttg cgccttgttg acggaaacgg tagagcaggg
     4381 tttggacatc gacgggggcg ggtgtggtat gcgtggtttc ttccaatgca ccccaaaagc
     4441 cgttgccgac cgtgccgaca atggcggttt tttcgcccaa caaatcggca gcttgcgcca
     4501 gccattgcgt gatggaggtt ttgccgttgg ttccggttac gccccagact ttgagaccgt
     4561 ctgaaacgtt gccgtaaact tgcgccgcca atatgccggc acggtgtttc aaatctttga
     4621 tgccttgatt ggggactttc cattcgggat tccacgcgaa tttgccgtcg tcgtcccaaa
     4681 aaacaaaagc cgcgccgttg gcaacggcgg cggggatata actgcgtccg tcggcatatt
     4741 cgcccggaca ggcaacgaaa atatcgcctt gtttgatttg gcggctgtct gaatgcaaca
     4801 aacgccctac cgcgtttgca cacgacaggg tcgggatgcc ggtttcagcc aaaggggtta
     4861 acttgctgaa cataaaacaa tctcgttgat actcggatta agacggtgtt ttgacggctg
     4921 cggcggtcag tggcttggtc ggggaaatgc ccaagatgtt caggctgccg cccataattt
     4981 ttttgaaggg cggccctgcc actacgccgc cgtaataacc gtgggcagtc ggttcgtcaa
     5041 tggttaccgc cacaatcaca cgggggtttt tggcgggggc aaaaccgata aaggtagcga
     5101 tgtgtttgtt gtcggcataa cgcccgttga cgaacttgcg cgccgtgccg gttttcgcgc
     5161 cgacatcgaa accgtccacc gcacccgccg taccggtgcc gcccggctcg gttacggaaa
     5221 ccatcagatt gcgtacctcg cgcgcggtcg attctttgaa tatgcgtttg ccttgcggcg
     5281 caaccgcctg tttttcaaag ctgaccggca gcaaaacgcc gtcgtgcgtc agtgcggtat
     5341 aggcgcgcgc caattgcagc aggctcaatt gcaggccgta accgaaagac atcgtcgcct
     5401 gttcgatggg ccgccacctg cgccaatttc tcaacaaacc tgcagtttcg cccggaaagc
     5461 ccgagtgcat acgcacaccg atgcccagct catgatagaa gtcatacatt tcttcggcac
     5521 cgaaacgcgc agacagtttg cttgtgccga cgttggacga tttctgcatg atgccgcgca
     5581 catccaaaga ggggtaaaca tgggtatcgc gcacgggaga cggtccgatt ttataaggct
     5641 gcgtattcag ccgttcgttc aaatcggttt tgcccgcatc caatgccttc gcaatcacaa
     5701 acggtttgat tgccgaaccg ggttcgatca tatcggttac ggcacggttg cgccgctgtt
     5761 cgctgtctgc ccggccgggc ctgttgggat cgtaggcggg cgtattggcc aaggcgagga
     5821 tttcccccgt gcgggcatcc aaaaccacca ccgttccggc ttttgcctga tggtattcga
     5881 ccgccttgtt caactcttca taggccaagg tctgaatcct ctgatcgagg gaaaggatga
     5941 tgtctttgcc gtttttcggg gctttattgc gcggggagtc caagctgtcc acaatattgc
     6001 cctgccggtc ccgcaaaacg acttccgcgc cgtcttcgcc atgcaggctg tcttcaagcg
     6061 aaagttccaa accttcctga cctttgccgt caatatcggt aaatccgatg acgtgtgcaa
     6121 acaggttgcc catcgggtaa tggcgtttta attctttttc aaatacaaag ttttccaaac
     6181 ccaaggcttt gacctcttcg gcaaccttgg gatcgagctg ccgcttaatc cagataaacg
     6241 acttgccttt ctgttcgagc ttgttcctca aaacatcaac cggcacatcg acaagctcgg
     6301 acaggcgttc caattgtgcg gcagacggca tttccttcat ctctttaggc acggcaaaca
     6361 gggactccgt cggcgcactc aacgccaaaa ccgcaccgtt ccggtccgaa accgtaccgc
     6421 gtgtagccgg caatgtttga gtccgcacaa tccggttgtc gccctgttct ttcaaaaagt
     6481 tatacgttac cgtctgcaga tacagtccgc gagcaatcag accggcaaac aagaccgcta
     6541 ttgccatcag gacgaagctg atccgtccgt tactggtcat cggctttttg acctgctctt
     6601 ctttgggcag catccgaggc ttatattcgc tcttaatcaa catttttact tctcgttatt
     6661 attatcctga cgcaggaatc cgattccggc acacaggctg cttctatctt tgatgcgcca
     6721 ccataaaggt attgcccgaa accggcggat ggaggttttg tttttctgcc gccgccctga
     6781 tcgcttcgtg gttcgccaaa cgcgcctgtt gcagcctcat ttgcgcataa tcctgctcca
     6841 aggcgatttc ctgttttttc gccttgtcca aagctgtgaa gttgagcctg tactggtttt
     6901 gctgcatcac aacggaaaaa gcggaaacgc acaccgcaag cagcagaagg aaattcaatt
     6961 tgttcattgc cattcagacg tttttctctg tgattgttcc ggtatcgaac cggcagtccg
     7021 ctccgccaca cgcaaaaccg cacttctcgc cctcggattg gcggcaattt ccgcctcacc
     7081 cggctttaat gccctgccca cgattttcag gggcagctcg ggcaaatccg cttccctgac
     7141 cgccgcccaa cgcggcaggg gcgcgtgttg cgaatatttt ttgacaaact gcttcacaat
     7201 gcggtcttcc aacgaatgga aagcaatgac cgccaaacgt ccgccctctt tcagacgaca
     7261 catgacctgc ggcaatactg cccctacttc ttcaagctcg cggttaataa agatgcggac
     7321 cgcctggaag gtgcgcgtcg caggatcctg cccccgctcg cgagtacgga cgttttgtgc
     7381 cacgatctgc gccagcttgc gggttgtatc gattggactt tccgcccgtt gcgcaacaat
     7441 ggcgcgcgca atctggcggc taaaccgctc ttcaccataa ttcttgatta cctcgtgcaa
     7501 atcctgttcc gacgcaaccg ctatccactc tgcggcagac ataccgcgcg tcgtatccat
     7561 acgcatatcc aaaggggcat cgaaacgaaa gctgaaaccg cggctgccgt catcgatttg
     7621 cggagacgaa atccccaaat caaacagcgc accgtccacc ttgccgatac ccaaaccgtc
     7681 caatgccgcc tgaaacgaag caaaaccgcc atgcacgaca ccgacccgct tgtccgaacg
     7741 cgccagctct tctgccacag caatcgcctg agggtctttg tcgaaaacaa tcaaccgccc
     7801 cgcatcgccc aaacgcgaca aaatcagccg ggaatgccct cccctgccga acgtaccgtc
     7861 cacatagaca ccgtcttcgc gcacggcaag cgcatccacc gcctcattca gcaagaccgt
     7921 gatatgccgg taactttctg ctccactcac aattgcaaat ccgtctgact caactggaag
     7981 gcaagttcgt caggatcgtc atccaaagcc tgaaccatct cagcctccca ctgctcgcga
     8041 ccccaaagct ccaaacggtt ggcacgaccg accaaaacga cttcacggtc gaaatccacc
     8101 ctcttcctca gtccggcagg aaccagcacc cggccggcgc tgtcccattc caaaatttcc
     8161 gcgttatgca gcaaaagatt ttgaaaccgc cgtaaaacag ggttatccgc cacttttaag
     8221 tttaaaagtt gcgccgcaac cttttcccac tccgcaacag ggtacatcaa cagcttatgt
     8281 ttcgactcga gcgttaccac tacggcaggc gtatagaggc gcgacagaat gtcgcggaat
     8341 ttggcaggaa cagccaaccg ccccttactg tcgatgctta attcgtgtgc gccgccgaac
     8401 atgacatgtc ccaagccgaa atcaaaatca caagggtaaa agagacactt tgccccacaa
     8461 ttccccacca atcgacacta taagaaattt taaacactcg gtcaaatcag ggcatgaaaa
     8521 ctcattaaca tatctgaaat ttttattcct tttaaaaaca ataagataaa aaatgacgac
     8581 aacggcacgg cgagtgcggt acagaataat cgaaccaata aacaactata tatgattaat
     8641 ttaataatat aaacacaata tatagtatta agataaagcc atgacagcac ccgtaccaac
     8701 gtgtaatatg tcgggaaatc caataaattt acacaagcta acacttatca tgcccctccc
     8761 cctcccctct cccgaagcac ggcaattctc gctcaaactg caaaccctca ttgccgaaaa
     8821 aatcggcaaa cacggcaact ggattccatt ttcacgtttt atggaattgg ttttatacgc
     8881 tccgcaatac ggctactaca ccggcggcag ccataaaatc ggcaataccg gggattttat
     8941 taccgcaccg accctcacct ctctgtttgc acagacactg gcacgccaac ttcaagaact
     9001 tctatcccaa acggcgggca atatctatga attcggcgcg ggaaccggac agcttgccgc
     9061 cgatttgttg ggcagcattt cggacggcat cagccgttac tatattattg aaatatcgcc
     9121 ggagctggca gcacgtcaga aaaacctgat tcaagcacgc gcaccggaag catctcaaaa
     9181 agttgtccac ttgaccgcac ttcccgaagc gtttgacggc atcatcatcg gcaacgaagt
     9241 actcgatgcc atacctgtcg aaatcgtccg taaagatgaa ggcggctcat tcgagcatgt
     9301 cggcgtttgc acggacaacg gccgtttcgc ctattctgca agacccttgc acgacccgtc
     9361 gctttccacc tcggcttccc tctattttcc tcaaacagat tatccctaca ccagcgaact
     9421 acatccgcaa caatatgcct ttatccgcac ccttgcctca agactcgaac acggctgcat
     9481 gatattcatc gactacggtt ttgatgcagc gcagtattac cacccgcaac gcaatcaagg
     9541 tactctaatc ggacactacc gacatcacgt tatccacaat ccttttgact tcatcggatt
     9601 ggccgacctg accgcgcatg tcaactttac cgacattgcc caagccggga cggatgccgg
     9661 attagatttg ataggttacc ttccccaatc ccatttctta ttgaacctgg gcattaccga
     9721 gctattggca cagacgggga aaacgaattc ggcagcctat atccgtgaag ctgctgccgt
     9781 tcagaaactg attgaccagc acgaaatggg cgaactgttt aaagtcatcg cattcggaaa
     9841 aaatatcggc gtcgactggg caggattccg cttcggcgac atctgccaca aactctaacc
     9901 ctcatgccgc ctgaatccgc ttcagacgac ataaactttt taacatttaa aaacagtcaa
     9961 ctaattcaaa attaaaaaat acggcttgtc aaaaaaacag aaaaacatat aatagcgtct
    10021 tcacgaaacg gcgaattagc tcagtcggtt agagcagagg aatcataatc cttgtgtccg
    10081 gggttcgagt ccctgattcg ccaccaaatt ttcgggggta tagctcagtt ggtagagcgc
    10141 ttgcatggca tgcaagaggt cagcggttcg attccgctta cctccaccag ataaaaaagc
    10201 acagaccgta aaaaggtatg tgctttttta ttgcctgatt gccagcaaat aaagaataaa
    10261 ccactgcctt caaaacaggc aatcgacttt aaacctatcg ccccgcctgt cctgatttta
    10321 tagtgaatta aatttaaacc ggtacagcgt tggctcgcct tgccgtacta tctgcggctt
    10381 cgtcgccttg tcctgatttt tgttaattca ctatatcagc ccgccagaca aacccgaccc
    10441 gaataatgtc ttcaggtcgg gtttatggtt tcattcccaa cttatccagc ctgacagcca
    10501 caatataatg atggcaatac caaaaacaat gcggtaatag gcaaaaggaa tataattttt
    10561 cttggaaaca aacctcagca acgcttttac cgctaccaag cctgaaacaa aggcagcaat
    10621 aaagcctatc agaatcaaac cgacatcatg cagggtgaaa aatcggtaat gtttcaggac
    10681 atcataagcc gttgctgcaa ccatcatcgg aacggccaag aaaaatgaaa actccgttgc
    10741 cgttttccgc tcgattcccc aaagcatccc gcccataatc gtactgcccg aacgggacgt
    10801 acccggaacc agtgcaaaca cttgggcaac gccgatcatc aacgcatcaa tcggacgcaa
    10861 tgcatcaaca tcgacaattt taggctctgc ccggctttgg cgtttctcca cccacaaaat
    10921 aaaaaaaccg cccaaaacca gcatgactgc aacactcaag gggttaaaca gatactcttt
    10981 gatttgtttg ccgaacaaca gccccatcac ggcggcaggt ataaaagcaa tggcaagatt
    11041 aaggacgaaa cggttggctt tccggtcttt tcccacgcca tgcaacacat tgctgaaacg
    11101 ctgccggtat tcaaacacta ccgccaaaac cgcaccgagc tggatggtaa tttcaaaaac
    11161 cttgtgattg ctgtgaaaat caatcagatt gccgaacaca atcaaatgtc cggtgctgga
    11221 aatcggtaaa aattcggtaa aaccttctac caagcccatc atcagggctt tcaggacaat
    11281 cagaaaatcc attgcttgcg cttctttcgg atacgggagt tcggctattt ctgtacagca
    11341 ggggtctgac gcttgcgttc ttccctgact ttggcaacca attctttaat cgtatgaaca
    11401 ccgccgtcaa agccattatt gaagataacg cggtattttc cgccgacgac aacggtcggc
    11461 gtactgtcga tgcggtactg ttccgtcaat tgctgcattt ttgatgcagc agccgctgcc
    11521 gcaggagagt cgtaggcgcg catcagtttt ttgccgtcaa agcctttttg agacaaagcc
    11581 catttttcgg caaccgacct gttttccaag cggatttttt gttcgtaaac tgctttaaac
    11641 acggcagggt ttgcctgata tttcaaacct gacagcttga ccgcagcagc cattcttgcc
    11701 agaccgagca tttcaggctg ccagaccacg tgctccgtcc ttaaataggc atcagacggc
    11761 aatgccttgc ccaatttcaa taacaaagga tcgaaatgat ggcaatgtac gcagaaatag
    11821 ccgaaaaatt ccaaaacctc aattttgccc gactgttttt gaggaatggg tttatccaac
    11881 acaagatagt cttccccttc cgtcagggca tatgcctgcg cggacaacac tgccgacagc
    11941 agcagcggca acagatgttt gagcttcata attatttgct ttcgatagaa cggatcaggc
    12001 tggcgacttc atgttttttc aactcgtcct gcattttttt caccgcatcg gcagacatat
    12061 tgccgctttg cacgcggtaa agcgttttat gtcccgcctg ataaccgacc actttggaat
    12121 atatgcccaa gattgccagt ttggcacgct gtccttccgc gctccggcgg tcggcatacg
    12181 cgcccatttg cagataatgc gttgcttccg ccttgtcgga cgttttcatt ttctgcactt
    12241 ctttggcggc ggcactgcgc gctttttcga tgctgccgct gttgaggatt tgttccgggg
    12301 tcggtttggg tgcaactttt tccttttccg cctttttctc ttcttttgaa gcttttttct
    12361 ctgtttcttt agacggtttt accgcttgtt ttttaaccgt ttcggcatct ttcttctgcg
    12421 ctttttccct gacggtttgt tcacgctctt ccgtcagcgc tttcttacgc actgcctgtc
    12481 cgtccggctc ttcccgttcc ggctcgcccg ccttttcttc aacctcgtcg gctttatcgg
    12541 caacgggctg cttgtcggca gctttttccg catccgactg ctctgcctct gtcgcagcat
    12601 ccggttcgga caaggcgttt tgatcggccg gttcaggttg gatgtcttcc ttaggctggt
    12661 ttttcggttt caggatttcc gtttctgcag gctgcttcga cgaagccggg attttgaacg
    12721 cattttgacc gctctggttc agataaaaca aaataccggc aataatgacc gtcgccagta
    12781 tcaaaccgaa gaaaaaaccg gacagacctt ttccggattg ggaaaatttg ttcataaaca
    12841 taccttaatg tgtttcagac ggcattaacg ccgtttgctt acgggcggat attctaacaa
    12901 tatcgccata tttgggcaaa acctgcttcc attcccattc ctataaagca cgacggaaac
    12961 ctatggcttt catgacgtgg cttctgccga cttcttcgtc gcccgccaaa tccgccaatg
    13021 tacgcgccac gcgcataatg cggtggaagc tgcgggcgga aagggagagt ttttccagca
    13081 ggccgcccaa tgcttcctgc gcttcttttt gaatgcgggc ggatgtgtcg agttcactga
    13141 cactcaaggc ggcattcact ttgccttgcc gtgcgtattg tttgtctcta gcggcgataa
    13201 cgcgttccaa aacggacgcg ctgctttccc ctgcttcctg ctgcatcagt tcggcggcgg
    13261 acaggctcgg gacttcgatg gtcaaatcga tgcggtcaag caacgggccg gaaattttgc
    13321 tgcggtaacg cgcgacgctt tcgggtgtgc agcggcaggg tttgacggga tgcccgagat
    13381 aaccgcacgg gcaggggttc atggcggcaa caagttggaa tttcgccgga tagacggctt
    13441 ggcgcgccgc gcgggaaatg tggatttcgc cgttttccaa cggttcgcgc aaaacttcta
    13501 aaactttgcg gtcgaactcg ggcagctcgt ccaaaaacaa tacgccgtgg tgcgccaatg
    13561 aaatctcgcc cggacgcgga tccgaaccgc cgccgaccat agccgccgca ctggcgctgt
    13621 gatgcggact gcggaaagga cggtggctgt cgagttgttg ctggtggttg ggcaggagcg
    13681 aacgcaatgc ccaaacttct accaattcgt cttcggtcag cggcggcagg atgccgggca
    13741 gccgttggga gagcatagac ttgcccgttc ccggcggacc catcatcaag aggctgtgtc
    13801 cgcctgcggc agcgatttcc aaagcaaggc gcgcggtgtg ctgacctttc acatcgcaca
    13861 aatcaggttg tccgccatgt tcaaacggca tctgaggaac ttggcattcg gtttgcgcca
    13921 aaggttcgat gccgttcaaa tgggcggcga cttcgcccaa agagcgcgcg ccgtaaacgg
    13981 taatgccgcg catcacggcg gcttgtcctg cgttttcttc aggcaaaaca aatgcacgtt
    14041 ttgcctgcat accctgccac gccatcgcca acgcgccgcg cacggggcgc aacagccccg
    14101 acagtgccaa ttcccccgca aactcgtatt ccgccagttt ttcgggcgca acctgccccg
    14161 atgcggcaag gatgccgatt gcaatcggca aatcgaaacg ccccgactct ttgggcaggt
    14221 cggcgggggc gaggttgacg gtaatttttt tggcggggaa ttcaaaaccg ctttgaataa
    14281 tggcggcacg gacgcggtcg cgactttcct ttacttccgt atcgggcagc ccgacgatgt
    14341 tgaaatgcgg caggccgttg gcaaggtggg cttctacttc aaccaacggc gcattcatac
    14401 cgctcaaagc gcggctgtaa accaaggcaa gcgacatatt tcagacggcc ttattcgccg
    14461 gcttcggttt gctgcctgat ttcggcgacg gcttcttcgg cagcggcttc agccgcttcc
    14521 aatgctgccc gttcgggatt ttgcgcggct tcgagtttcg ccaaacgcgc ttccaaagcc
    14581 gccagtttgg tacgggtttt gattaaaacc tgctgctgga tgtcgaattc ttcgcgcgta
    14641 accagatcca tacggttgaa cgcgccgccc agcatcgcct taatattttt ttccacatct
    14701 ttggcagggc tgttggcgat ggtttcgctg attttcgaac cgacttcttc aaaaagctgc
    14761 ttgccgaaca taatctgtat ccttcctgaa catatcaaat tcaatcggct attgtataag
    14821 gaaaaatgcc gtctgaaaac gggcggcgga taatcggcaa aacataccgc gcctcctttg
    14881 cggttgctaa attacacctc aaaacacctg ccgcctgaaa acggatttca tattccgcgc
    14941 aacgccagat tacaagacat tacaaaacaa tatactgttt taaatgattt ttccgacgcg
    15001 catcgtttca aactcggctt tttaagccat taagtgcttt gcaaacaaca gaaattgggt
    15061 tatgctgaaa cggattattt acaatttcat atagttttat tacatatctt attgtgattg
    15121 aagataattt atccgaatcc ccctttcggg tatccggatt ttccgttgta cttttattag
    15181 aaaaacattt caggcgcaag ttgcttgcaa tttcaaagcc tgtaattctg aagttttaga
    15241 cgaggaatag cacatgaatc ccatgtacat tacttttgca atctatctgg ttgcagtcct
    15301 tctcatcggg cttgccgcct atttttctac gcgcaatttc gacgattata ttttgggcgg
    15361 gcgcagccta ggcccgtttg ttaccgcgat gtcggcaggc gcgtccgata tgtccggctg
    15421 gctgctgatg ggtctgccgg gcgcgattta tttgagcggt ttgaatgagg cttggattgc
    15481 catcggcctc ttggtcggcg cgtatttcaa ctggctcttg gtggcgggcc gcctgcgcgt
    15541 gcataccgaa tacgccaaca atgcgctgac gctgccggat tatttcttcc accgcttcgg
    15601 cgcgggcgga cacttgatga aagtggtttc cgcactgatt atcctgttct tcttcacgat
    15661 ttattgcgcc tcgggcattg tggcgggcgc aaccctgttc caaagcctgt ttgaaggtat
    15721 gacttacaat caggcaatgt ggctgggcgc gggcgcgacc atcgcctata ccttcttggg
    15781 cggcttcttg gcggtcagct ggacggatac gctgcaggct tctttgatga ttttcgccct
    15841 gattttaacg ccggtgatgg tctatctggg cttgggcggc gcggaacaga tgtctgccgc
    15901 gattcaaagc gtcgccgcag gcacgggcaa agaatacggc agcctgtttg ccggtacgac
    15961 cgtcatcggc atcatttcca ccgccgcatg gggcttgggc tatttcggac agccgcacat
    16021 tttggcgcgc tttatggcgg ccgaaagcgc gaaatcgctg gtatccgcac gccgcatcgg
    16081 catgacttgg atggcgttgt gccttgcggg cgcggtggcg gtcggttatt tcggcattgc
    16141 gtatttcggt gcaaatcccg acaaagtttc ttctatgagc ggcaaccacg aacgcatctt
    16201 catcgcgctt tccaccctgc tgttcaaccc ttggatcgcc ggcatcattt tgagcgcgat
    16261 tttggcggcg gtgatgtcca ccctgtcctg ccagcttttg gtttgctcca gcgcgattac
    16321 cgaagacttc tacaaaggct ttttgcgtaa aaacgcgcaa cagtcggaac tggtatgggt
    16381 cggccgcctg atggtcttgg cgattgccgt gatttccatc ctgattgctt ccgatccgaa
    16441 cagcaaagta ttgggactgg tgtcttatgc gtgggcaggt ttcggtgcgg cgttcggccc
    16501 gattgtgatt ctgtccgtat tgtggaaacg catcactgcc tacggcgcgt tgtcgggtat
    16561 ggttgcaggt gccttaaccg tagtcgtatg ggcggaatgg gtaaaaaaac cggctcaagc
    16621 ggcaggcgaa agcggcttgt tgacgatgta cgaaatcgtc ccgggcttta ttgtttgctt
    16681 aatcgtcgcc gtattggttt ccctgttcaa caaagaacct tcgcgcgaaa cccaagaacg
    16741 ctttgaaaaa gccgacgcag attaccgcgc cgcccgataa acccctttca gacggcacgg
    16801 catcccggtt cgtgccgtct gaacccgttt ccgggtcaaa cacaaataaa ccttgcctgc
    16861 atacaggcct tatttgtgtt ttacccgttt cattttcaaa gaaacggaag cacctaccct
    16921 gcccgcattt gaagccttgt atttcatctg cggatttatt acgatattac cgtattcagg
    16981 ccgcaccgat gccgcctgcc ccccgaaaaa ctttggagaa tccaaaaaat gtttcatttt
    17041 gcatttccgg cacaaactgc cctgcgccaa gcgataaccg atgcctaccg ccgtaatgaa
    17101 atcgaagccg tacaggatat gttgcaacgt gcacagatga gcgacgaaga gcgcaacgcc
    17161 gcctccgagc ttgcccgccg tttggttacc caagtccgcg ccggccgcac caaagccggc
    17221 ggcgtggatg cgctgatgca cgaattctca ctctccagcg aagaaggcat cgcactgatg
    17281 tgtctggcgg aagccctgct gcgtatcccc gacaacgcca cgcgcgaccg cctgattgcc
    17341 gacaagattt cagacggcaa ctggaaaagc catttgaaca acagcccttc cctcttcgtc
    17401 aatgctgccg cctggggcct gctgattacc ggcaaactga ccgccacaaa cgacaaacaa
    17461 atgagttccg cactcagccg cctgatcagc aaaggcggcg caccgctcat ccgccaaggc
    17521 gtgaattacg ccatgcgcct gttgggcaaa cagttcgtca ccggacagac cattgaagaa
    17581 gccctgcaaa acggcaaaga acgcgaaaaa atgggctacc gcttctcctt cgatatgttg
    17641 ggcgaagccg cctacaccca agccgatgcc gaccgctact accgcgacta tgtcgaagcc
    17701 atccacgcca tcggcaaaga tgcggcagga caaggcgttt acgaaggcaa cggcatttcc
    17761 gtcaaactct ccgccatcca tccgcgctac tcgcgcgccc aacactgccg cgtgatgggc
    17821 gaactgttgc cgcgcctgaa agagctgttc cttttgggca aaaaatacga tatcggtatc
    17881 aacatcgatg ccgaagaagc caaccgcttg gagctgtctt tggatttgat ggaggctttg
    17941 gtttcagacc ctgacttggc tggctacaaa ggtatcggtt tcgttgtcca agcctaccaa
    18001 aaacgttgtc cgttcgttat cgactacctg attgacctag cccgccgcaa caaccaaaaa
    18061 ctgatgatcc gcctcgtcaa aggcgcgtat tgggacagcg aaatcaaatg ggcgcaagtg
    18121 gacggcttga acggctatcc gacctacacc cgcaaagtcc acaccgacat ctcctacctc
    18181 gcctgcgcgc gcaaactgct ttccgcgcaa gacgcggtat tcccgcaatt tgccacgcac
    18241 aacgcctaca ccttaggcgc aatctaccaa atgggcaaag gcaaagactt tgaacaccaa
    18301 tgcctgcacg gcatgggcga aaccctgtac gaccaagtcg tcggcccgca aaacttaggc
    18361 cgccgcgtgc gcgtgtacgc cccggtcggc acacacgaaa ccctgctcgc ctacttggtg
    18421 cgccgcctgt tggaaaacgg cgcgaactcg tctttcgtca accaaatcgt cgatgaaaac
    18481 atcagcatcg acacgctcat ccgcagcccg ttcgacacca tcgccgaaca aggcatccac
    18541 ctgcacaacg ccctgccgct gccgcgcgat ttgtacggca aatgccgtct gaactcgcaa
    18601 ggcgtggact tgagcaacga aaacgtattg cagcagcttc aagaacagat gaacaaagcc
    18661 gccgcgcaag acttccacgc cgcatccatc gtcaacggca aagcccgcga tgtcggcgaa
    18721 gcgcaaccga ttaaaaatcc tgccgaccac gacgacatcg tcggcacagt cagttttgcc
    18781 gatgccgcgc ttgcccaaga agcggttggc gcagccgttg ccgcgttccc cgaatggagt
    18841 gcgacacctg ccgccgagcg cgccgcctgc ctgcgccgtt tcgccgacct gctcgaacag
    18901 cacacccccg cactgatgat gcttgccgtg cgcgaagcag gcaaaacgct gaacaacgcc
    18961 attgccgaag tgcgcgaagc cgtcgatttc tgccgctact acgcaaacga agccgaacat
    19021 accctgcctc aagacgcaaa agccgtcggc gcgattgtcg ccatcagccc gtggaatttc
    19081 ccgctcgcta tctttaccgg cgaagtcgtt tccgcattgg cggcaggcaa caccgtcatc
    19141 gccaaacctg ccgaacaaac cagcctgatt gccggttacg ccgtttccct gatgcacgaa
    19201 gccggcatcc cgacttccgc cctgcaactc gtcctcggtg caggcgacgt aggtacggca
    19261 ttgaccaacg atgcccgcat cggcggcgta attttcacag gctcgaccga agtggcgcgc
    19321 ctgatcaaca aagcccttgc caaacgcggc gacaatcccg tcctgattgc cgaaaccggc
    19381 ggacaaaacg ccatgattgt cgattccacc gcacttgccg agcaagtctg cgccgacgta
    19441 ttgaactccg ccttcgacag cgcgggacaa cgctgctccg ccctgcgtat cttgtgcgtc
    19501 caagaagacg ttgccgaccg tatgctcgac atgatcaaag gcgcgatgga cgaactcgtc
    19561 gtcggcaaac cgattcagct cactaccgat gtcggccccg tcatcgatgc cgaagcacag
    19621 caaaacctgt tgaaccacat caacaaaatg aaaggcgttg ccaagtctta ccacgaagtc
    19681 aaaaccgctg ccgatgtcga ttccaaaaaa tccacgttcg ttcgccccat cctgtttgaa
    19741 ttgaacaacc tcaacgaact gcaacgcgaa gtcttcggtc ccgtcctgca cgtcgtccgc
    19801 taccgcgccg acgaactcga caacgtcatc gaccaaatca acagcaaagg ctacgccctg
    19861 acccacggcg tacacagccg catcgaaggc acggtacgcc acatccgcag ccgcatcgaa
    19921 gccggcaacg tttacgtcaa ccgcaacatc gtcggcgcag tcgtcggcgt acagcccttc
    19981 ggcggacacg gtctgtccgg cacaggcccc aaagcaggcg gttcattcta cctgcaaaaa
    20041 ctgacccgcg ccggcgaatg ggttgccccg accctgagcc aaatcggaca ggcggacgaa
    20101 gccgcactca aacgcctcga agcactggtt cacaaactgc cgttcaacgc cgaagagaaa
    20161 aaagccgcag cggccgcttt gggacacgcc cgcatccgca ccctgcgccg tgccgaaacc
    20221 gtccttaccg gaccgaccgg cgagcgcaac agcatctcat ggcacgcgcc caaacgcgtt
    20281 tggatacacg gcggcaacac ggttcaagcc tttgccgcac tgaccgaact tgccgcctcc
    20341 ggcgtacagg cagtggtcga acccgacagc ccgctggctt cctacaccgc cgacctggaa
    20401 ggtctgctgc tggtcaacga caaacccgaa accgccggca tcagccacgt tgccgccctg
    20461 tcgcctttgg acagcgcgcg caaacaggaa cttgccgccc acgacggcgc actcatccgc
    20521 atcctccctt cggaaaacgg actcgacatc ctgcaagtgt ttgaagaaat ctcttgcagc
    20581 gtcaacacca cagccgccgg cggcaacgcc agcctgatgg cggttgccga ctgattttac
    20641 cgaaatcccc gagcgcggcc cgtgaaccaa tgccgtctga aaacctttca gacggcattt
    20701 ttata
//
LOCUS       DAWGKF010000019        19587 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.019, whole genome shotgun sequence.
ACCESSION   DAWGKF010000019 DAWGKF010000000
VERSION     DAWGKF010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19587)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19587)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19587
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.019"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(392..2167)
                     /gene="ptsP"
                     /locus_tag="WHR07_000489"
     CDS             complement(392..2167)
                     /gene="ptsP"
                     /locus_tag="WHR07_000489"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HEZ2129742.1"
                     /translation="MSIVLHGVAAGKGIAVGCAHLIARGTEEVPQYDVAEADTDAEAE
                     RFDAAVKATRKELEQLRSAIPENAPTELGAFISLHLMLLTDVTLSREPVDILREQKIN
                     AEWALKQQSDKLAAQFDNMDDAYLRERKQDMLQVVRRIHNNLIGQGNELEVADNLFDE
                     TVLIANDLSPADTVLFKEQRIAAFVTDAGGPTGHTAILGRSLDIPSVVGLHNARKLIT
                     EGETVIVDGINGVLIIAPDESVLNEYRRRAREYRSHKRDLNKLKKTAAATADGVCIEL
                     VGNIESAEDVKPLHNLGADGIGLFRSEFLYLNRDTMPSEDEQYEVYNAIVKKMKGKSV
                     TIRTVDLGVDKNPRWFGKNSTPNGSLNPALGMTGIRLCLAEPVMFRTQMRAILRAAVH
                     GPVRMMWPMITSVSEVRQCLIHLDTAQRQLAERGDAFGKVGIGCMIEIPSAALTVGSI
                     LKLVDFISVGTNDLIQYILSVDRGDDSVSHLYQPGHPAVLKMLQHVIRTANRMDKDVS
                     VCGEMAGDTAFTRILLGMGLRRFSMNPNNILPVKNIILHSNIAQLENEIAKIVRCEDE
                     EKAEKLIKQMNSVSVEEEADFKGRK"
     gene            complement(2167..2436)
                     /locus_tag="WHR07_000490"
     CDS             complement(2167..2436)
                     /locus_tag="WHR07_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HEZ2129743.1"
                     /translation="MLKQSIEIINKLGLHARASNKFTQTASQFKSEVWVTKNDSRVNG
                     KSIMGLMMLAAAKGTVIELETDGADEAEAMRALTDLINGYFGEGE"
     gene            complement(2505..2942)
                     /locus_tag="WHR07_000491"
     CDS             complement(2505..2942)
                     /locus_tag="WHR07_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEZ2129744.1"
                     /translation="MIGLLIITHETIGEAYRKLAHHFFPGGLPENVRILGVQPTEDQD
                     DIINNAIAALQEFPDNDGVLIMTDIFGATPCNAARRLVRENKSAILTGLNAPMMVKAV
                     QYSPAAEDLAAFTECVREAAVKGIFAITSAPEDLVCRRSGDAV"
     gene            complement(3023..3586)
                     /locus_tag="WHR07_000492"
     CDS             complement(3023..3586)
                     /locus_tag="WHR07_000492"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine-guanine phosphoribosyltransferase"
                     /protein_id="HEZ2129745.1"
                     /translation="MTDLETKRLETQAMLENADLLFDQGQCRAALQKVADEITRDLGG
                     KYPLLLPVMGGAVVFTGQLLPLLRFPLDFDYVHVSRYGDKLEGGAFNWKRMPDAEQIR
                     GRHVVVLDDILDEGHTMSAIQAKLLEMGAASCRAAVFANKLIDKPKPIRADYVGLDVP
                     NRYVFGYGMDAAGCWRNLGEIYALDGK"
     gene            complement(3655..4479)
                     /locus_tag="WHR07_000493"
     CDS             complement(3655..4479)
                     /locus_tag="WHR07_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HEZ2129746.1"
                     /translation="MIKKTIGGIIPIFTAVFIPASAGAADLMLAQEYKGQDIAGWAMS
                     EKLDGVRAYWDGKHLVSRQGYVFTPPKGFTAQFPPYPLDGELYSGRGQFEQISATVRS
                     ASSDWRGIRLHVFDVPKAQGNLYQRLAVATQWLKTHPNAPITIIPQIKVRDRQHAMDF
                     LKQIEAQGGEGVMLRQPESRYSGGRSSQLLKLKSQYDDECTVTRHYEGKGRNAGRLGA
                     VGCKNRYGEFRIGSGFKDKDRDNPPKIGTLITYRYRGFTQKGTPKFATFVRVRTDR"
     gene            4571..5203
                     /locus_tag="WHR07_000494"
     CDS             4571..5203
                     /locus_tag="WHR07_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEZ2129747.1"
                     /translation="MTLRYEIFPVTPFRQNCTLIWDDESGEAVLTDVGGDVPFLLQAL
                     ANRKLTLTAIWLTHGHLDHAGGVVEMLKTHKVPVLGPHPDDEFLLQSLPQTTAQYGFP
                     VSPAFAPNRWLEEGETLTVGRYAFQVLHIPGHTPGHIVFYCAEAELLIAGDVLFYETI
                     GRTDFPRGNHADLINNIRNKLFTLPETVQVVAGHGRMTSIGHEKRHNPFF"
     gene            complement(5410..7194)
                     /gene="rmuC"
                     /locus_tag="WHR07_000495"
     CDS             complement(5410..7194)
                     /gene="rmuC"
                     /locus_tag="WHR07_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HEZ2129748.1"
                     /translation="MELMTVLLPLAALVSGVLFTWLLMKGRFQGEFADLNAQLAEKAA
                     RCDFVEQAHAEIASELAVLDGKYRHLQDENYALGNRFSAAEKQIAHLQEKEAESVRLK
                     QSYIELQEKAQGLAVENERLATQLGQERKAFADQYALERQIRQRIETDLEESRQTVRD
                     VQNDLADVGNRFAAAEKQIAHLQEKEAEAERLRQSHTELQEKAQGLAVENERLATQIE
                     QERLASEEKLSLLGEARKSLSDQFQNLANTILEEKSRRFTEQNREQLHQVLNPLNERI
                     HGFGELVKQTYDKESRERLTLENELKRLQGLNAQLHSEAKALTNALTGTQNKVQGNWG
                     EMILETVLENSGLQKGREYVVQAASVRKEEDGGTRRLQPDVLVNLPDNKQIVIDSKVS
                     LTAYVRYTQAADADTAARELAAHVASIRAHMKGLSLKDYTDLEGVNTLDFVFMFIPVE
                     PAYLLALQHDAGLFQECFDKRIMLVGPSTLLATLRTVANIWRNEQQNQNALAIADEGG
                     KLYDKFVGFVQTLESVGKGIDQAQSSFQTAFKQLAEGRGNLVGRAEKLRLLGVKAGKQ
                     LQRDLVERSNETTALSESLEYAAEDEAV"
     gene            complement(7533..8321)
                     /locus_tag="WHR07_000496"
     CDS             complement(7533..8321)
                     /locus_tag="WHR07_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HEZ2129749.1"
                     /translation="MKQAMKNWFAALLLAVPMGAAFASGGHAHYEKVDIDLRDQVSLQ
                     RGAQIFTNYCLSCHSASGMRFNRLKDIGLTDEEIKKNLMFTTDNVGDVMHSAMNPKDA
                     AKWFGAAPPDLTLIARSKGADYLYAYMRGFYKDPTRPSGWNNTVFDKVGMPHPLWEQQ
                     GVQAVELDAKGQPVMVKDEHGEMKPKLYWESTGLHSRRLPNGKVIQKEYDAYVRDLVN
                     YLVYMGEPAQLQRKRIGYVVMIFLFAVMLPLAYFLKKEYWKDVH"
     gene            complement(8336..9685)
                     /locus_tag="WHR07_000497"
     CDS             complement(8336..9685)
                     /locus_tag="WHR07_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HEZ2129750.1"
                     /translation="MANQTNSKAKALLGWMDARFPLSKMWNEHLAQYYAPKNFNFWYY
                     FGSLALLVLVIQIVSGIFLTMNYKPDGNLNAYHLPAAFTAVEYIMRDVSGGWIIRYMH
                     STGASFFFIVVYLHMFRGLIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMS
                     FWGAQVIINLFSAIPVIGPDLSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAH
                     IIALHEVGSNNPDGVEIKKNKDENGIPRDGIPFHPYYTVKDILGVVVFLIVFCAVLFF
                     APEGGGYFLEAPNFDAANALKTPPHIAPVWYFTPFYAILRAIPSFLGTQVWGVIGMGA
                     AVVLIALLPWLDRGEVKSVRYRGPIFKTALVLFIISFIGLGILGAMVATDTRTLVARI
                     LSFVYFAFFLGMPFYTKLDKNKPVPERVTMSTAKQKIMFFVYVGITAVGAYLFATNI"
     gene            complement(9704..10285)
                     /gene="petA"
                     /locus_tag="WHR07_000498"
     CDS             complement(9704..10285)
                     /gene="petA"
                     /locus_tag="WHR07_000498"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HEZ2129751.1"
                     /translation="MDNQEINNGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAK
                     AAGAAVEVDVSKIEAGQLLTAEWQGKPIWVLNRTDQQLKDLKGLNGELTDPNSDAEQQ
                     PEYAKNETRSIKPNILVAIGICTHLGCSPTFRPDIAPADLGADWKGGFFCPCHGSKFD
                     LAGRVYKGVPAPTNLVVPPYKYLSDTTILVGED"
     gene            complement(10408..11157)
                     /locus_tag="WHR07_000499"
     CDS             complement(10408..11157)
                     /locus_tag="WHR07_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HEZ2129752.1"
                     /translation="MVLRRDFLTWCNETLQTALFKDYAPNGLQVEGREYIGKIVTSVT
                     ASRAAIDFAVEQKADLLLVHHGMFWKNELPTVTGWKKERIAALLRHDINMAGYHLPLD
                     AHPTLGNNAQLADRLGFATEKRFGEQNLLNSGSLKQAKTLGALVAHIETVLQRKPVVI
                     GNPEREIRRVAWCTGGAQGFFQTAIDEGVDLYLTGEISEAQYHLANETGTAFISAGHH
                     ATERYGVRALAESAAEVFGLEVCHFDENNPA"
     gene            11288..12217
                     /locus_tag="WHR07_000500"
     CDS             11288..12217
                     /locus_tag="WHR07_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEZ2129753.1"
                     /translation="MDSIIELRHLKTLLALEETGSVSLAAKRVFLTQSALSHQIRMLE
                     NHYGAPLFERKSTPLRFTPVGERLLRLAHDLLPQVTDAERDLARIIEGEAGELRIAVE
                     CHTCFDWLMPAMGEFRPIWPQIELDIVSGFQADPIGLLLQHRADLAIVSEAEKQNGIS
                     FQPLFAYEMVGICAPDHPLAAKTVWEAEDFIGETLITYPVPDEMLDLPKKILIPKNIN
                     PPRRHSELTIAIIQLVASRRGIAALPYWTVMPYLEKGYVVHRQITADGLQSKLYAAIR
                     TEDTDKSYLNNFCQIIRERGFADLPGLSELEPV"
     gene            complement(12473..12865)
                     /gene="rpsI"
                     /locus_tag="WHR07_000501"
     CDS             complement(12473..12865)
                     /gene="rpsI"
                     /locus_tag="WHR07_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEZ2129754.1"
                     /translation="MNGKYYYGTGRRKSSVARVFLIKGTGQIIVNGRPVDEFFARETS
                     RMVVRQPLVLTENAESFDIKVNVVGGGETGQSGAIRHGITRALIDFDAALKPALSQAG
                     FVTRDAREVERKKPGLRKARRAKQFSKR"
     gene            complement(12875..13306)
                     /gene="rplM"
                     /locus_tag="WHR07_000502"
     CDS             complement(12875..13306)
                     /gene="rplM"
                     /locus_tag="WHR07_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007343693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEZ2129755.1"
                     /translation="MKTFSAKPHEVKREWFVIDAQDKVLGRVAAEVASRLRGKHKPEY
                     TPHVDTGDYIIVINADKLRVTGAKFEDKKYFRHSGFPGGIYERTFREMQEQFPGRALE
                     QAVKGMLPKGPLGYAMIKKLKVYAGAEHAHAAQQPKVLELK"
     gene            complement(13484..13663)
                     /gene="ssrS"
                     /locus_tag="WHR07_000503"
     ncRNA           complement(13484..13663)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="WHR07_000503"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(13669..13974)
                     /locus_tag="WHR07_000504"
     CDS             complement(13669..13974)
                     /locus_tag="WHR07_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HEZ2129756.1"
                     /translation="MNIEQVHIEVMHARLTVNTPAEEKDTLLQAVGMLNGKAEAIREG
                     GRVADSEKIVIMAALNVVHDLLKTSLNGGDLAIGDFARKIADMDNACQKALSRLAQE"
     gene            complement(13985..14314)
                     /locus_tag="WHR07_000505"
     CDS             complement(13985..14314)
                     /locus_tag="WHR07_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129757.1"
                     /translation="MKQNIEKLESSVYTLVQKFETLVSENRRLKETVAELKRAHERQK
                     LEHETAVDELSEALLVQVGKLKEDLQNKIDSLTEENTRYRSLLEQSREKISALAARLP
                     QWQETQQ"
     gene            complement(14369..15358)
                     /locus_tag="WHR07_000506"
     CDS             complement(14369..15358)
                     /locus_tag="WHR07_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEZ2129758.1"
                     /translation="MKITVIGAGSWGTALALHFSQHGNRVSLWTRNADQVRQMQEARE
                     NKRGLPGFSFPETLEVCADLADALKDSGLVLIVTSVAGLRSSAELLKQYGAGHLPVLA
                     ACKGFEQDTGLLTFQVLKEVLPDNKKIGVLSGPSFAQELAKQLPCAVVLASENQEWIE
                     ELVPQLNTTVMRLYGSTDVIGVAVGGAVKNVMAIATGLSDGLEYGLNARAALVTRGLA
                     EITRLASAMGAQPKTMMGLAGIGDLILTCTGALSRNRRVGLGLAEGKELHQVLVEIGH
                     VSEGVSTIEEVFNTACKYQIDMPITQTLLQLIRKEMTPQQVVERLMERSARFE"
     gene            complement(15481..18183)
                     /gene="ppc"
                     /locus_tag="WHR07_000507"
     CDS             complement(15481..18183)
                     /gene="ppc"
                     /locus_tag="WHR07_000507"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HEZ2129759.1"
                     /translation="MQLHILNNPKDAALAADAEFLKQSLFNLLHEEASPLVVETVKLL
                     STSDDSAALIEKVLPQLDEQQTHDLTLACGLFAQILNIAEDVHHERRRQIHEEAGRGG
                     AEGSLTETVRRLKAGKADGKSVQRQLDNTSVTAVLTAHPTEVQRQTVLSFNRRIRALL
                     PQRERCTNADALARLRREIDTILLGLWQTSETRRHKLSVNDEINNGVSIFPMSFFEAL
                     PKLYRNMEHDFQMVYPDVCVPNILKIGGWIGGDRDGNPFVSAETLRFAFRRHADAVFR
                     FYRGELDKLYRELPLSIRRVKVNDDVMALAALSPDEEIARTEEPYRRAIAYIMARAMG
                     KARALGLGMGCKFGFLEPYASAQEFLDDLKKLQRSLIDNGSRLLAEGRLADLIRSVSV
                     FGFHMMPLDLRQHAGKHADVVAELFQHAGLEDYNSLNEEQKQAALLRELSHQRPLYSP
                     FITYSDHTRHELAIFNEARKIKDEFGEDAVTQSIISNCEQPSDLLALALLLKESGLLA
                     VENGKPRSRINIVPLFETIEALENACPVMETMFRLDWYDALLESCGNIQEIMLGYSDS
                     NKDGGYVTSSWCLYQAELGLVELFKKYDVRMRLFHGRGGSVGRGGGPSYQAILAQPAG
                     SVAGQIRITEQGEVITAKYADPGNAQRNLETLVAATLEASILPDKKDPDAKLMQALSD
                     VSFKYYRELITHPDFIDYFLQTSPIQEIATLNLGSRPASRKTLARIQDLRAIPWVFSW
                     MQNRLMLPAWYGFGSAVETLCEDKPETLAALREHAQSNPFFQAMLSNMEQVMAKTDIT
                     LAENYAGLSESPEKAAVIFGMIKEEYQRSRKALLDLLQTEELLRDNRSLARSLALRIP
                     YLNALNGLQVAMLKRLRKEPDNPHALLMVHLTINGVAQGLRNTG"
     gene            18226..19119
                     /locus_tag="WHR07_000508"
     CDS             18226..19119
                     /locus_tag="WHR07_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HesA/MoeB/ThiF family protein"
                     /protein_id="HEZ2129760.1"
                     /translation="MPHPCQTVHTLTARVPKCRLKLNAARRQRYNRPQLFFPNIIMTT
                     TEHDNDDAFLLRYSRHILLDEIGIEGQQKLSAAHILVVGCGGLGAAALPYLAASGIGT
                     LTIADSDTVELHNLQRQVAFDEGDVGKPKAEALADRLKRINHNVDVRTVNEKLDGCRL
                     TGLVQTADIVLDCCDNYATRQAVNRVCVQTKTPLVSGAAVRFEGQLAVYRPDLPDSPC
                     YACLFDGGSASDGICSLFGVFSPLVGIIGCTQAAEALKILLDVGEPSHGRLAVYRALE
                     GGWQYFDLPRNPECPICGTER"
BASE COUNT         4229 a         5304 c         5184 g         4870 t
ORIGIN      
        1 tgttttaagg gaatgacgag acttgagatg gcggcattta tcgggagcaa cagaaaccac
       61 tctgccgtca ttcccgcgaa agcgggaatc tagaacccaa cgcgacaaaa atttatccga
      121 agcgacaaca atcttttcat cgtcattccc gcaaaagcgg gaatctagaa cgtaaaatct
      181 aaagaaaccg ttttacccga caagtttccg tgccgacaga cctagattcc cgcctgcgcg
      241 ggaatgacgg attttaggtt tctgattttg gttttctgtt tttgagggaa tggccgattt
      301 tgggtttctg tttcggtttt ctattttgca ggaatggcaa aatttcagat tgcgggcatt
      361 gttaagtatt tctatttttt acctgccgta tttatttccg ccccttgaag tcggcttctt
      421 cctcgacaga cacgctgttc atctgtttga tcagcttttc cgccttttcc tcgtcctcgc
      481 agcggacgat tttggcaatc tcgttttcga gctgtgcgat attgctgtgc aggatgatgt
      541 ttttgacggg caggatgttg ttcggattca tggaaaaacg gcgcagcccc ataccaagca
      601 ggatgcgggt aaacgccgta tcgcccgcca tctcgccgca tacggacacg tctttgtcca
      661 tgcggttggc ggtgcggatg acgtgttgca gcattttcag cacggcggga tgtccgggct
      721 ggtaaagatg gctgacgctg tcgtcgccgc gatcgacgga caagatgtat tgaatcaggt
      781 cgttggtgcc gacggagatg aaatcgacca gtttcaaaat actgccgacg gtcagcgcgg
      841 cagacggaat ttcaatcata cagccgatgc cgactttacc gaaggcatcg ccgcgttcgg
      901 caagctggcg ttgcgcggtg tcgaggtgga tgaggcactg gcgcacttcg gatacggagg
      961 taatcatcgg ccacatcatg cggacgggac cgtgtaccgc cgcacggagg atggcgcgca
     1021 tctgggtgcg gaacatgacc ggttcggcaa ggcacaggcg gatgccggtc atgcccagcg
     1081 cggggttgag gctgccgttg ggcgtgctgt ttttcccgaa ccagcgcggg tttttgtcca
     1141 ctcccaaatc gactgtccgt atcgttacgc ttttgccctt catttttttg acaatcgcgt
     1201 tgtacacttc gtactgctcg tcttcagacg gcatcgtatc gcggttgagg taaagaaact
     1261 cgctgcggaa cagcccgatg ccgtctgcgc cgaggttgtg cagcggtttc acgtcttcgg
     1321 cggattctat attgcccaca agctcgatgc agaccccgtc ggcggtggcg gcggcggttt
     1381 ttttgagctt gttcaaatcg cgtttgtggc tgcggtattc gcgggcacgg cggcggtatt
     1441 cgttcaacac cgactcatcc ggcgcgataa tcaacacgcc gttgataccg tccacaatga
     1501 ccgtttcgcc ttcggtaatc agtttgcgcg cgttgtgcag cccgacgacg gacgggatgt
     1561 ccaagctcct gcccaaaatc gccgtatgcc cggtggggcc gccggcatcg gtaacgaagg
     1621 cggcaatgcg ctgctcttta aacaaaaccg tgtcggcggg cgaaaggtcg tttgcaatca
     1681 gaacggtttc gtcaaacagg ttgtcggcaa cttccaactc gttgccctgc ccgatcaggt
     1741 tgttgtggat gcggcggacg acttgcagca tatcctgctt gcgttcgcgc aaataggcat
     1801 cgtccatatt gtcgaattgg gcggcgagtt tgtcgctctg ctgcttcaat gcccactcgg
     1861 cgttgatttt ttgttccctt aaaatatcga cgggttcgcg cgacaaggta acatcggtca
     1921 agagcatcag gtgcagcgag atgaacgcgc ccaactcggt cggggcgttt tcgggaatcg
     1981 cgctgcggag ctgttccaac tctttgcgcg tggctttgac ggcggcatcg aaacgttcgg
     2041 cttcggcatc ggtgtccgcc tccgcaacat catactgcgg cacttcctcc gtaccgcgcg
     2101 caatcaggtg ggcgcaaccg acggcaatgc ctttgcccgc cgccacgccg tgcagcacga
     2161 tactcattat tcgccctcgc cgaagtagcc gttgattaag tcggtcaggg cgcgcatcgc
     2221 ttccgcctcg tccgcgccgt cggtttccag ctcgatgacc gtacccttgg cggcggcgag
     2281 catcatcagc cccataatgc ttttgccgtt gacgcggctg tcgtttttcg taacccagac
     2341 ttcgcttttg aattgggacg cggtttgggt gaacttgttg gacgcgcggg cgtggagtcc
     2401 gagtttgttg atgatttcga tggattgttt gagcatttcg gttcccgtgt tatgtatatc
     2461 ggcagcagac gccgtttaaa atgttttcct gccctgccgc ttcttcagac ggcatcgccg
     2521 ctgcgccggc acaccaaatc ttcgggcgcg gacgtgatgg cgaaaatgcc ttttacagcc
     2581 gcctctctga cacattcggt aaaggcggca aggtcttccg ccgccggcga atattggacg
     2641 gccttaacca tcatcggcgc gttcagcccg gtcaaaatcg ccgatttgtt ttcgcgcacg
     2701 aggcggcggg cggcattgca gggggtcgcg ccgaagatgt cggtcataat cagcacgccg
     2761 tcgttgtcgg gaaattcctg aagcgcggca atggcgttgt tgatgatgtc gtcttggtct
     2821 tccgtcggtt gcacgccgag tatgcggacg ttttcaggca gcccgcccgg gaaaaaatga
     2881 tgtgccagct tgcggtaggc ttcgcctatg gtttcgtgtg tgatgattaa aagccctatc
     2941 atattatgcg tcctgttcct cgttgtcctg ccggcgtatg ggcgcaatgc cgtctgaaag
     3001 gcattcagac ggcatcgcgt ccttattttc cgtccaatgc gtaaatctcg cccagattgc
     3061 gccagcagcc cgccgcatcc atgccgtaac cgaaaacata acggttcggc acatccagtc
     3121 cgacataatc ggctcggata ggcttgggtt tgtcgatcag cttgttggcg aacaccgccg
     3181 cacggcagct tgccgcaccc atttccaaaa gtttggcttg aatggcggac atcgtatgcc
     3241 cttcgtccaa aatatcgtcc agcacgacga cgtgcctgcc ccggatttgt tccgcatcgg
     3301 gcatacgctt ccagttgaac gcgccgccct ccagcttgtc gccgtaacgg gaaacgtgaa
     3361 cataatcaaa atctaaggga aaacgcaaca gcggcagcaa ctgccccgta aacaccaccg
     3421 cgccgcccat cacgggcagc agcagcggat atttgccgcc caaatcgcgc gtaatctcgt
     3481 ccgccacttt ttgcagtgcg gcacggcatt ggccttggtc gaacaaaaga tcggcgtttt
     3541 caagcatcgc ctgtgtttca aggcgtttgg tttctaaatc ggtcatatgt cggaatcggt
     3601 cggtaaaagg aaaattataa accaaagtat cggatgccgt ctgaactgtc ctgctcagcg
     3661 gtcggtacgc acgcgcacaa acgtggcgaa tttcggcgtg cctttctgcg taaagccacg
     3721 gtagcggtag gtaatcagtg tgccgatttt gggcgggttg tctcggtctt tatctttgaa
     3781 gccgctgcca atgcggaatt cgccgtaccg gtttttgcag ccgaccgcgc ccaaccgtcc
     3841 ggcgtttcgc cctttgccct catagtgccg cgttaccgtg cattcgtcgt cgtattggct
     3901 tttcagcttc aataattggc tgctcctgcc gccgctgtaa cgggattcgg gctgacgcag
     3961 catcacgcct tcgccgccct gcgcttcgat ttgttttaaa aagtccatcg cgtgctgccg
     4021 gtcgcgcact ttgatttgtg ggatgatggt aatcggcgcg ttcggatgcg ttttcagcca
     4081 ctgcgttgcg actgccaaac gttggtagag attgccctgc gccttgggta catcgaaaac
     4141 gtgcaggcgg ataccgcgcc agtctgaaga agcagaacgc acggtagcgg aaatctgctc
     4201 gaactgaccg cgtccgctat acaattcgcc gtccaaagga taaggcggaa actgcgcggt
     4261 aaagcctttg ggcggtgtaa atacatatcc ttgccggctg actaaatgtt taccgtccca
     4321 atacgcgcgc acgccgtcga gtttctcgct catcgcccag cctgcaatgt cctgcccttt
     4381 gtattcctgc gccagcatca aatccgccgc gcctgctgat gcagggatga aaaccgccgt
     4441 aaaaatcggt atgatgccgc cgattgtctt cttaatcatc tgattccccc aatatcaaaa
     4501 cgggcggcaa accgccataa aacaaacggc aaacccgatg ccgtctgaaa aaccgtttag
     4561 gaacacgccg atgaccctac gttacgaaat cttccccgtt acccccttcc gccaaaactg
     4621 caccctgatt tgggacgacg aaagcggcga agccgtcctg accgatgtcg gcggcgacgt
     4681 gccgttcctg ctgcaagcgt tggcaaaccg caaacttacg ctcacggcaa tctggctgac
     4741 gcacggccat ctcgatcacg cgggcggcgt ggtcgaaatg ttgaaaacgc ataaagtccc
     4801 tgtcctcggg ccgcatccgg acgatgaatt cctgctccaa tcgctgccgc aaaccaccgc
     4861 gcaatacgga tttcccgtct cgcccgcctt tgcgccgaac cgttggctcg aagaaggcga
     4921 aacgctcacg gtcggacgct atgcctttca agtgctgcat attccgggcc atacgccggg
     4981 acatatcgtc ttttattgtg ccgaggcgga attgctgatt gcgggcgacg tgctgtttta
     5041 cgaaaccata ggcagaaccg attttccgcg cggcaaccac gccgacttaa tcaataatat
     5101 ccgcaacaaa ttattcaccc ttcccgaaac cgtgcaagtt gtcgccggac acgggcgtat
     5161 gacttccatc ggacacgaaa agcggcacaa tccgtttttc taaccgcctt ccctacggtc
     5221 ttcagacggc atcatctgca ctgatgccgt ctgaaacaca aaaggctcag acaaccgccg
     5281 ccttgccggt gtacctcgcc agacaaggct ttggtaagta cttcaaacaa acccaaaatc
     5341 agaaccagta cagttacgcc gcgctttcgg cattcccgcc ccggctgaaa caatattttt
     5401 ccgcacaagt cagactgctt catcttctgc cgcgtattcc aaagattccg acaacgccgt
     5461 tgtttcattg gaacgctcga ccaaatcccg ttgaagttgt ttgcctgcct tcacgcccaa
     5521 cagacgcagt ttctcggcgc gtccgaccag attcccgcgc ccttcggcaa gttgcttgaa
     5581 tgccgtctga aaactgcttt gcgcctgatc gatgcctttg ccgacgcttt cgagcgtctg
     5641 tacgaagccg acaaacttgt cgtacagctt gccgccttcg tccgcaatcg ccagtgcgtt
     5701 ctgattttgc tgttcgttgc gccaaatatt cgccaccgtc ctcaaagtcg ccagcagcgt
     5761 actggggccg accagcataa tccgtttgtc gaaacactct tggaacaatc ccgcgtcatg
     5821 ctgcaacgcc agcaggtagg ccggttcgac agggataaac ataaagacga aatccaatgt
     5881 gttcacacct tccaaatcgg tgtaatcctt cagcgacaag cctttcatgt gtgcacggat
     5941 gctggcaacg tgtgccgcca gttcgcgtgc cgccgtatcc gcatccgccg cctgcgtgta
     6001 gcgcacataa gctgtcagcg agaccttgga gtcaatcaca atctgcttgt tgtcgggcag
     6061 gttgaccaaa acgtcgggct ggaggcgacg cgtgccgccg tcttcctctt ttcggacgga
     6121 tgccgcctga accacatatt cgcgcccttt ctggaggccg gaattttcca aaaccgtttc
     6181 cagaatcatc tcgccccaat taccctgaac cttgttctgc gtgccggtca gcgcgttggt
     6241 cagggccttt gcctcgctgt gcagctgcgc attcaatcct tgaagccgtt tcaattcgtt
     6301 ttccaacgtc agccgctcgc gcgattcttt atcataggtt tgcttgacca actcgccgaa
     6361 accgtggatg cgttcgttta gcgggttcaa aacctgatgg agctgctcgc ggttctgctc
     6421 ggtaaaacgg cggctttttt cttccaaaat cgtgttggca agattttgaa actgatcgct
     6481 caagctcttg cgcgcctcgc ccagtaagga cagcttctct tcagaagcaa ggcgttcctg
     6541 ttcgatttgc gttgccaaac gttcgttttc aaccgccaaa ccctgtgcct tttcctgcaa
     6601 ctcggtatgc gactgcctca accgctccgc ttccgcctct ttttcctgca aatgggcaat
     6661 ctgtttttcg gctgcggcaa aacggttgcc gacatcggca aggtcgtttt gcacgtcgcg
     6721 gacagtttgg cggctttctt ccaaatcggt ttcgattctt tggcggattt ggcgttccaa
     6781 ggcatattgg tcggcaaacg ccttccgttc ctgtccgagc tgcgttgcca aacgttcgtt
     6841 ttcaaccgcc aaaccctgtg ccttttcctg caactcgata tacgactgct tcagccgaac
     6901 cgattccgcc tctttttcct gcaaatgggc aatctgcttt tcggctgcgg aaaaacggtt
     6961 gcccaaagca taattttcgt cctgcaaatg tcggtatttc ccgtccaaaa cggccaattc
     7021 cgatgcaatt tctgcgtgtg cctgttcgac aaaatcacat cttgccgcct tttccgccag
     7081 ttgcgcgttc aaatcggcaa actcgccctg aaacctgccc ttcatcagca accatgtaaa
     7141 caacacgccc gacaccaacg ccgccaaagg cagcaaaaca gtcatcagtt ccatcaatca
     7201 tcctaatatt caaacatttt cacaccggac aaaaccgccg cttattccga ttctacctgt
     7261 ttgttcgaca tagctccaaa aaatatagcg gattggcttt aaacctgttc gacatcgcct
     7321 taccatgctg cttgcggttt cagacctttt cctaattcaa tatcaatctg ccacaaaccc
     7381 tgattaagtt cccgatgtct gacattttta gaatgatgcc gtctgaaatg ttgcagctat
     7441 gttcagacgg catacggatt caggcttttc aaacggcagg caaaatgaaa aaagggcaaa
     7501 ccctaaagga tttgcccttt tgttccaaac gcttagtgta cgtctttcca atattctttt
     7561 ttcaggaaat acgccaaagg cagcataacc gcaaatagga aaatcatcac gacatagcct
     7621 atacgtttgc gttgcagttg tgcaggttcg cccatgtaca caaggtaatt gaccaaatcg
     7681 cgtacatatg cgtcgtactc tttctggatc actttgccgt taggcagacg gcggctgtgc
     7741 aaaccggtag attcccaata cagcttaggc ttcatctcgc cgtgttcgtc ttttaccata
     7801 accggctgac ctttggcatc caactcaacg gcttgaacac cttgttgctc ccacaacggg
     7861 tggggcatac cgactttatc gaatacagta ttgttccagc cgctcggacg ggtcggatct
     7921 ttatagaagc cgcgcatata ggcgtaaagg tagtctgcac ctttggaacg cgcaatcaac
     7981 gtcaaatcgg gcggagcagc accaaaccat tttgccgcat ctttcgggtt catcgccgaa
     8041 tgcatgacat cgccgacatt atcagtggta aacatcaggt ttttcttgat ttcttcgtca
     8101 gtcaaaccga tgtctttcaa acggttgaaa cgcataccgc ttgccgagtg gcaggacagg
     8161 caatagttgg taaagatttg tgcgccgcgc tgcaggctga cttggtcgcg caaatcgata
     8221 tcgactttct catagtgtgc atgaccgccc gaagcaaatg ccgcacccat gggtactgcc
     8281 aacagcaagg cagcaaacca atttttcata gcttgtttca ttttgactgc cctcatcaga
     8341 tgttggttgc aaacaggtaa gcacccacgg cggtaatgcc gacgtaaaca aagaacatga
     8401 ttttttgttt ggcggtgctc atggttacgc gttcgggaac cggtttgttt ttatccagct
     8461 tggtatagaa cggcataccc aggaagaatg cgaaatagac gaaggacagg atgcgcgcga
     8521 ccaaagtacg cgtatcggtt gccaccatcg cgcccaaaat acccaaaccg ataaaggaaa
     8581 tgatgaacaa gaccaatgcg gttttgaaaa tcgggccgcg gtaacggacg gatttcacct
     8641 cgcccctatc cagccaaggc agcagggcaa tcaacacgac cgccgcgccc ataccgatta
     8701 caccccaaac ctgcgttccc aagaacgagg gaatcgcacg caaaatggcg tagaacggtg
     8761 tgaaatacca taccggcgca atgtgcggag gtgttttcag cgcatttgcc gcatcgaagt
     8821 tcggcgcttc gaggaagtag ccgccgcctt ccggtgcgaa gaacaatacg gcacagaaga
     8881 caatcaggaa tacaaccaca cccaagatgt ctttaacggt atagtaagga tggaatggga
     8941 taccgtcgcg cgggataccg ttttcgtctt tgtttttctt gatttcaacg ccgtcagggt
     9001 tgttagaacc cacttcgtgc agggcgatga tgtgcgccac aaccaagccg agcaatacca
     9061 gaggtaccgc gataacgtgc agggcaaaga agcggttcag ggtaacgtcg gaaacgttga
     9121 agtcgccgcg aatccaagtg gacaaatccg gaccgataac agggatggcg gagaacaggt
     9181 taataattac ctgcgcaccc caaaaggaca tctgacccca aggcagcagg tagcccataa
     9241 aggcttccgc catcaatgcc aagaaaatca gagaaccgaa aatccacacc aactcacggg
     9301 gttttttgta cgaaccgtaa atcaaaccac ggaacatgtg cagataaaca acaatgaaga
     9361 agaaagatgc gccggtggaa tgcatgtagc ggataatcca accgccggac acgtcgcgca
     9421 tgatgtactc gactgcagta aaggcagcag gcagatggta ggcgttcagg ttgccgtccg
     9481 gtttgtagtt catcgtcagg aaaataccgc tgacgatttg aatcacgagg acaagcaagg
     9541 ctaaagagcc gaagtagtac caaaaattaa agtttttcgg tgcgtagtat tgagccaaat
     9601 gctcattcca cattttagac agggggaaac gagcgtccat ccagcctaac aatgcttttg
     9661 ctttgctatt ggtttggttt gccataatta tcgttcctta ttcttagtct tcgcccacca
     9721 agatagttgt gtcgctcaag tatttatatg gcgggacaac caggttggtc ggggcaggaa
     9781 cacctttata tacgcggccg gccaagtcga atttcgaacc gtggcagggg cagaagaagc
     9841 cgcctttcca gtctgcaccc aaatcggcgg gggcaatgtc gggacggaag gtgggcgagc
     9901 agcccaaatg ggtgcagata ccgatggcga caaggatgtt cggcttaatc gaacgggtct
     9961 cgtttttcgc atactccggc tgctgttccg catcggaatt gggatcggta agttcgccgt
    10021 tcaggccttt caggtcttta agctgctgat ctgtacggtt gagcacccaa atcggtttgc
    10081 cttgccactc ggcggtcagc agctgacccg cttcgatttt actgacatcc acctcgacgg
    10141 cagcaccggc ggccttggct ttttccgaag ggaaaaaact ggccacaaac ggcgttgcca
    10201 cacccaatgc tgccactccg cccgcgccgc aggtcgcgag tgtcaggaaa cggcggcggc
    10261 cgttgttgat ttcttgatta tccattattc agtcgtccta atattttggg aataccgagc
    10321 cattaaacgt tgcaatttta cccagtttgc agtgatactc aaagcattat ttaaaataag
    10381 gtaaagtttt atgatatttc tcaagactca agccggattg ttttcgtcaa aatggcacac
    10441 ttccaacccg aaaacctctg ccgccgattc tgccagcgcg cgtacgccgt aacgttccgt
    10501 cgcgtgatgc cctgccgaaa tgaaagccgt acccgtttca ttggcgagat ggtattgggc
    10561 ttcagagatt tcccccgtca gatacagatc gacgccttca tctattgccg tctgaaaaaa
    10621 accctgtgca ccgccggtac accatgcgac ccgtcggatt tcgcgttcgg gattgccgat
    10681 aacgacaggc ttacgttgca aaactgtttc aatatgcgcc accaatgcgc cgagtgtctt
    10741 ggcttgtttc aggctgcccg agttgagcag gttttgttcg ccgaaccgtt tttctgtcgc
    10801 aaaacccaat ctgtcggcga gttgggcatt gttgcccagt gtgggatgtg catccagggg
    10861 cagatggtag cctgccatat tgatgtcgtg ccgtaacagt gcggcaatcc gttctttttt
    10921 ccaaccagta acggtcggca actcgttttt ccagaacata ccgtgatgta ccaaaagcaa
    10981 atctgccttc tgctccacag caaaatcaat cgctgccctg cttgccgtta ccgacgtaac
    11041 gattttcccg atatattccc tcccttcaac ctgcaaaccg ttaggggcgt aatctttaaa
    11101 caacgctgtc tgcaatgttt cattacacca agtcagaaaa tccctgcgca ataccatctt
    11161 ttttcctaat cgctttaaac aagcgggcat tctaatcgca aaatgtctgg aattcacatt
    11221 tttccgattt gcacccgcat atgaattatt ttaatatgcg ccggttcaat atgccgtctg
    11281 aaacctcatg gattccatca tcgaactgcg ccacctcaag accctgctgg cacttgaaga
    11341 aaccggcagc gtctcccttg ccgccaaacg ggttttcctt acccaatctg cactttccca
    11401 ccaaatccgt atgcttgaaa accactacgg cgcaccgttg ttcgaacgaa aatccacgcc
    11461 cttgcgcttt accccggttg gagaaaggct gttacgcctc gctcacgacc tgttgcctca
    11521 agttaccgat gcagaacgtg atttggcacg cattatagaa ggagaggcag gagaattgcg
    11581 gattgccgtc gaatgccata cctgtttcga ctggctcatg cccgcaatgg gcgaattccg
    11641 cccgatatgg ccccaaatcg aattggatat cgtatcggga ttccaagcgg accctatcgg
    11701 actgctgctg caacaccgtg ccgaccttgc cattgtttcc gaagcggaaa aacaaaacgg
    11761 tatttctttc caaccgctgt ttgcctacga aatggtcggc atttgcgcac cagaccatcc
    11821 gcttgccgcc aaaactgtct gggaagccga agactttatc ggggaaaccc tgattactta
    11881 tcccgttccc gacgagatgc tggatttgcc caaaaaaatc ctgattccga aaaacatcaa
    11941 cccgccgcgc cgacacagcg agctgaccat cgccattatc caactggttg ccagcagacg
    12001 tggcattgcc gcccttccct attggacagt catgccctac cttgaaaaag gctatgtcgt
    12061 tcaccggcag attactgccg acggattgca aagcaaactg tatgccgcca tccgtaccga
    12121 agatacggac aagagctatc tgaacaattt ttgccaaatc atacgcgaac gcggttttgc
    12181 agatttgccc ggactgagcg aactggaacc ggtctgaccc cttattcaac catacccggc
    12241 agtttttcta ttttttcatg tatagtggat taacaaaaac cagtacagcg ttgcctcgcc
    12301 ttgccatact atttgtactg tctgcggctt cgtcgccttg tcctgatttt tgttaatcca
    12361 ctatactgtt tttgattttt gcccaatctg taatctttag attgccaatg ggaaaccgtc
    12421 tactacaaat aaaaaaaccc tgcgataagc agggtttttt gaatttccaa cattaacgtt
    12481 tggagaattg ttttgcacgg cgtgctttgc gcagacccgg ttttttacgt tcgacttcgc
    12541 gggcatcgcg ggtaacaaaa ccggcttgag acaaggcggg tttcaacgcg gcatcgaagt
    12601 cgatcagggc acgggtaatg ccgtggcgga ttgcgccgga ctggccggtt tcgccgccgc
    12661 caacaacatt gactttgatg tcgaaagatt cggcgttttc agtcagaacc aagggttggc
    12721 gaacaaccat tcggctggtt tcgcgtgcga agaattcgtc aacgggacgg ccgtttacga
    12781 tgatttgacc tgtaccttta atcaggaata cacgagccac tgaacttttg cggcggcctg
    12841 tgccgtagta gtatttaccg ttcatgtcgc gtccttattt cagttccaaa actttgggtt
    12901 gttgcgcagc atgggcgtgt tccgcacccg catacacttt cagtttttta atcatggcgt
    12961 aacccaaagg acctttgggc agcatacctt ttacagcttg ttccaaagcg cggcccggga
    13021 attgctcttg catttcgcgg aaagtgcgtt cgtagatacc gcctgggaaa ccggaatggc
    13081 ggaagtattt tttatcttcg aatttggcac cggttacacg cagtttgtcc gcattgataa
    13141 caatgatgta atcgccggta tcgacgtggg gggtgtattc aggtttgtgt ttgccacgca
    13201 gacggctggc gacttcggcc gcaacgcgac ccaagacttt gtcttgggca tcgatgacga
    13261 accattcgcg cttcacctcg tggggtttcg ctgaaaaggt tttcatagtg gaaatccaaa
    13321 tagatataga aagttgtaaa ttttaaagac aggattcgat tttgtcaatc gcattaccgc
    13381 gttacggaag gattttccgg atttcggcag actgcatact gctttttcgg gcggggcggc
    13441 ggccaatgtg aaaaaccgca tcgttgcgat gcggttttga atgggaatcc ccgcgagagc
    13501 cgtttcggcc gaatccgctt gaaccttgct gacaaggcgg ctgcctcggg tagtttcggg
    13561 tgcgtccgca aaaggacgct cgcgcccact actgctcccg gcaaccttaa gcgaacttat
    13621 tggttcaaag gaatatatgc cttcgcggac accgcaggga aaaaggggtt attcctgcgc
    13681 caagcgggat agtgcttttt ggcaggcgtt gtccatatcg gctattttac gcgcaaaatc
    13741 gccgattgcc aaatcgccgc cgttcaggga ggttttcaac aggtcgtgga cgacgttgag
    13801 cgcggccata atgacgattt tttcgctgtc cgcgacgcgt ccgccttcgc ggatggcttc
    13861 ggctttgccg ttgagcattc cgactgcctg caacagtgtg tctttttctt ctgccggcgt
    13921 gttgacggtc agccgggcgt gcatgacttc gatgtggact tgttcgatgt tcatccttta
    13981 atccttattg ctgcgtttcc tgccattggg ggaggcgcgc tgccagtgcg ctgatttttt
    14041 ccctgctctg ttcgagcagg ctgcggtatc gtgtattttc ttctgtcagg ctgtcgattt
    14101 tgttttgcag gtcttctttg agtttgccga cttggacgag cagggcttcg ctgagttcgt
    14161 cgacggcggt ttcgtgttcg agtttttgcc gctcgtgcgc ccgtttgagt tcggcgacgg
    14221 tttctttgag gcggcggttt tcgctgacga gggtttcgaa tttttgtacc agcgtataaa
    14281 cgctgctttc gagtttttcg atattttgtt tcataacctt acctgtccgt atgccgtctg
    14341 aaggcttcag acggcatctg tctgttgttt attcaaaacg cgcgctgcgt tccatcagcc
    14401 tttcgacgac ctgttgcggg gtcatttctt tgcggatgag ttgcagcagg gtttgggtaa
    14461 tcggcatgtc gatttggtac ttacaggcag tattgaagac ttcttctatc gtgctgaccc
    14521 cttcggaaac gtgtccgatt tcgaccagca cctgatgcag ttccttgcct tctgccaaac
    14581 ccaagccgac gcggcggttg cgtgagagtg cgccggtgca ggtcaagatg aggtcgccga
    14641 tgcctgccag ccccatcatg gttttgggct gtgcgcccat tgcggaggca aggcgggtga
    14701 tttcagctaa tccgcgcgta accagtgcgg cacgggcgtt aagcccgtac tctagaccgt
    14761 cggacaatcc ggtggcaatc gccataacat tttttaccgc gccgccgact gccacgccga
    14821 taacatcggt actgccgtaa agcctcatga cggtcgtgtt gagctgcggt acgagttctt
    14881 caatccactc ttggttttcg gaggcgagga cgacggcgca gggcagttgt ttggcgagtt
    14941 cctgtgcaaa actcggaccg gaaagtacgc cgattttttt attgtcgggc aatacttctt
    15001 tcaatacttg aaaggtcagc agccctgtat cctgctcgaa tcctttgcag gcggcgagga
    15061 cggggaggtg tcccgcgccg tactgtttga gcagctctgc gctgcttctc aatccggcaa
    15121 cggaggttac gataaggaca agtccgctgt ctttgagcgc gtctgccaaa tccgcacaca
    15181 cttccaaggt ttcgggaaag gaaaagccgg gtagtccgcg tttgttttca cgcgcttcct
    15241 gcatttggcg gacttggtct gcgttgcgcg tccacaggga tacgcggttg ccgtgttggg
    15301 aaaagtgcag ggcgagcgcc gtaccccacg aacctgcgcc gataacggta attttcattg
    15361 gtcgtctttc aacatatcac tgccgttcac tttaaaacaa tcggtgtttc tctgcaagtg
    15421 cggtcaggga aatgccgtct gaaaggtgtt cagacggcat tttgccccga tgcggcacaa
    15481 tcagcctgta ttgcgcaaac cttgcgccac gccgttgatg gtcaggtgaa ccatcagcag
    15541 cgcgtgcgga ttgtcgggtt ctttacgcag gcgtttgagc atggcgacct gcaggccgtt
    15601 gagcgcgttc aaatatggaa tcctcaaggc aagcgaacgg gcgaggctgc ggttgtcgcg
    15661 taaaagttct tcggtttgca gcaggtcgag cagggctttg cggctgcgtt ggtattcttc
    15721 cttaatcatg ccgaagatga cggcggcttt ttccggcgat tcgctcaagc cggcatagtt
    15781 ttccgcgagg gtgatgtcgg ttttcgccat cacttgctcc atattggaaa gcatggcttg
    15841 gaagaacggg ttgctttggg cgtgttcgcg cagggcggcg agcgtttcgg gtttgtcttc
    15901 gcacaaggtt tccaccgcgc tgccgaaacc gtaccaagca ggcagcatga ggcggttttg
    15961 catccatgag aatacccacg gaatcgcacg caagtcctga atccgcgcca aggttttgcg
    16021 gctggcagga cggctgccga ggttgagggt ggcgatttcc tgaatcgggc tggtttgcag
    16081 gaagtagtcg atgaagtcgg ggtgggtaat cagttcgcgg tagtatttga acgatacgtc
    16141 cgacaatgcc tgcatcagtt tggcatcagg gtctttttta tccggcagga tgctggcttc
    16201 caaagtcgcg gcaaccaagg tttccaagtt gcgttgggca ttgccggggt cggcgtattt
    16261 ggcggtaatg acttcgcctt gttcggtaat gcggatttgt cccgccacgc tgcccgccgg
    16321 ttgggcgaga atggcttggt aagaagggcc gccgccgcgt ccgacgctgc cgccgcgacc
    16381 gtggaacagg cgcatgcgga catcgtattt tttgaagagt tcgaccaagc ccaattccgc
    16441 ctgatacaga caccatgagc tggtaacata gccgccgtct ttgttggagt cggagtagcc
    16501 gagcataatt tcttggatgt tgccgcagct ttcgagcagg gcatcgtacc aatcgaggcg
    16561 gaacatggtt tccatgaccg gacaggcgtt ttcgagtgct tcgatggttt caaacagcgg
    16621 cacgatattg atgcggctgc gcggtttgcc gttttccacc gccagcaggc cgctttcttt
    16681 cagcagcaat gccaaggcga gcaggtcgct gggttgttcg cagttggaaa taatgctttg
    16741 tgtaacggca tcttcgccga attcgtcttt gattttgcgc gcttcgttga aaattgccag
    16801 ttcgtggcgg gtatggtcgc tgtatgtgat gaacgggctg tacagcggac gttgatggct
    16861 caattcgcgc aacagggcgg cttgtttttg ctcttcgttc aggctgttgt agtcttccaa
    16921 gcctgcgtgt tggaaaagct cggcaaccac atcggcgtgt ttgcctgcgt gttggcgcag
    16981 gtcgagcggc atcatgtgga agccgaacac ggacacggaa cggatgaggt ctgccaaacg
    17041 gccttcagca agcaggcggc tgccgttgtc gataagggaa cgttgcaatt ttttcaaatc
    17101 atcgagaaat tcttgtgccg aagcatacgg ctcgagaaag ccgaatttgc agcccatgcc
    17161 caaaccgagc gcgcgcgctt tgcccatagc gcgcgccatg atgtaagcaa tggcgcggcg
    17221 gtagggttct tcggtgcgag cgatttcttc gtcaggcgag agggctgcca gtgccattac
    17281 gtcgtcgttg actttgacgc ggcggatgga gagcggcagt tcgcggtaaa gtttgtcgag
    17341 ttcgccacgg taaaaacgga acacggcatc ggcgtggcgg cggaaggcaa aacgcaaggt
    17401 ttcggcagaa acgaacggat tgccgtcgcg gtcgccaccg atccagccgc cgattttgag
    17461 gatgttcgga acgcagacat cgggatagac catctgaaag tcgtgttcca tattgcggta
    17521 gagcttgggc agggcttcga aaaagctcat cgggaagatg gacacgccgt tgttgatttc
    17581 gtcgttgacg ctgagtttgt ggcggcgcgt ttcgctggtc tgccacaagc ccagcaggat
    17641 agtgtcgatt tcgcggcgca gccgtgccag cgcgtcggca ttggtgcagc gttcgcgttg
    17701 cggcaacagt gcgcggatgc ggcggttgaa gcttaagacg gtttggcgtt gcacttcggt
    17761 cgggtgcgcg gtcaaaacgg cggtaacgga cgtattgtcc aactgccgct gcaccgattt
    17821 gccgtcggct ttccccgctt tgagcctgcg gacggtttcc gtcaggctgc cttccgcgcc
    17881 gccgcgtccg gcttcttcgt ggatttggcg gcggcgttcg tggtgcacgt cttcggcgat
    17941 attcaaaatc tgggcgaaca ggccgcaggc caaggttaaa tcgtgggttt gttgttcgtc
    18001 caattgcggc aatacttttt caatcaatgc cgcgctgtcg tcggaagtgg acaagagttt
    18061 gaccgtttcg acaaccaacg gcgaggcttc ttcgtgcagg aggttgaaca gggattgttt
    18121 cagaaattcc gcgtccgccg ccaaagccgc gtccttcgga ttgttcagaa tatgcagttg
    18181 catgattttt ctctcattgc cgtaaatact gtaaatgtac ctcaaatgcc gcatccgtgc
    18241 caaaccgttc acactttaac cgcccgtgtc ccgaaatgcc gtctgaagtt gaacgccgcc
    18301 cgacggcagc gttacaatcg cccacaactg ttttttccga acatcatcat gaccacgacc
    18361 gaacacgaca acgacgatgc attcctgctg cggtacagcc gccacatcct cttggacgaa
    18421 attggcatcg aagggcagca gaaactttcc gccgcgcata ttttggtcgt cggctgcggc
    18481 ggtttgggtg ccgccgccct gccctatctc gccgcttccg gcatcggcac gctgaccata
    18541 gccgattccg acacggtcga gctgcacaac ctgcaacgcc aagtcgcatt tgacgagggc
    18601 gatgtcggca agcccaaagc cgaagccttg gcagaccgcc tgaaacgcat caaccataac
    18661 gtcgatgtcc gcaccgtcaa cgaaaaactc gacggctgcc gcctgaccgg tttggttcaa
    18721 accgccgaca tcgttttaga ctgctgcgac aactacgcca cgcgccaagc cgtcaaccgt
    18781 gtctgcgtac aaacgaaaac accgctggtt tcaggagcag cggtgcgctt tgaagggcaa
    18841 cttgccgtgt accgtcccga cttgcccgac tcgccgtgtt acgcctgcct gtttgacggc
    18901 ggatcggctt cagacggcat ctgttccctc ttcggcgtat tctcgccgct ggtcggcatc
    18961 atcggctgca cgcaggcggc ggaggctctg aaaatcctgc tagacgtggg cgaaccgtcg
    19021 cacggcaggc tggcggttta ccgtgccttg gaagggggct ggcaatattt cgacctgccg
    19081 cgcaaccccg aatgcccgat ttgcggcacg gaacggtaaa accctgccgc cgtttcagac
    19141 ggcataaaga cggatgcgga ggaacggttt taaaaatcgg cggtgttttg acatagtgtc
    19201 gataagcata cttatcttca atatactcaa caggataatt gtttgcctaa gcaaaaaata
    19261 atcgcctttt ccctgacggg cgggcgaaat ccacggattg caaaaacaca acctgaaaat
    19321 ttacatttct ttgcaaaaaa aaaaaaaaaa ataaacttac cttataattg cagttgtctt
    19381 agcaatgtct gtttcgcaga ctcattgagt aagacgtttt ccccgtaatg tgtttggccg
    19441 tctgtcccct ttgggttcgg acggcttttt tttggctgtg tatgaatacc cggttggttt
    19501 tatctgttta caggggaaaa ccgcttattt ccgttcgggc ggaaaacggt tccatcggat
    19561 aaaggcattt tgtccgactg attaaag
//
LOCUS       DAWGKF010000020        19314 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.020, whole genome shotgun sequence.
ACCESSION   DAWGKF010000020 DAWGKF010000000
VERSION     DAWGKF010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19314
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.020"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(265..423)
                     /locus_tag="WHR07_000509"
     CDS             complement(265..423)
                     /locus_tag="WHR07_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129761.1"
                     /translation="MKPPLPICTLSALAACTLSGQGGTQVYGEIKARDLCVTAPILLS
                     AFCLACSR"
     gene            complement(420..1262)
                     /locus_tag="WHR07_000510"
     CDS             complement(420..1262)
                     /locus_tag="WHR07_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ2129762.1"
                     /translation="MLVCNPYEVVIHGTTSSGKIFRPSDWAERLCGILSSFTKDHRLS
                     YSKWVRPMLVDNIRCVAVDKKLETDNPQMFRFLMDFAADNDLRVIDCKALLEEREQGG
                     QNNPADEHVMLAQAIEEKHAAEKAQEQTASGASYVLREIGADDTATAFAALSVLRSAL
                     TDINRFTEQINKVQRPQGYRLLGIFEEGKHNAVAVCGFREACTLASGRHIHIDDIVTL
                     PQSRRKGYASRLLEEVRKIGAETGVTKIHLNVHVNHDRADAHRLYFKNGFEICAYHFR
                     CDPK"
     gene            1501..2421
                     /gene="pyrB"
                     /locus_tag="WHR07_000511"
     CDS             1501..2421
                     /gene="pyrB"
                     /locus_tag="WHR07_000511"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HEZ2129763.1"
                     /translation="MPNPLYRQHIISISDLSREQLECLLQTALKLKAHPRGDLLEGKL
                     IGSCFFEPSTRTRLSFETAVQRLGGKVIGFSDGANTSAKKGETLADTARIISGYTDAI
                     IQRHPKDGAARVAAEFSRVPVINAGDGTNQHPSQTLLDLVTIYETQGRLDKLKIAMAG
                     DLKYGRTVHSLCQALKRWGCEFAFVSPPSLAMPDYITEELDEAGCRYRILGSLEEAAE
                     WADILYMTRVQRERFDEQEFAKIQGKFNLDASMLARAKPNLRVLHPLPRVDEIHPDVD
                     ATPHAYYFEQATNGVYARMAILSLVLNEEV"
     gene            2431..2889
                     /locus_tag="WHR07_000512"
     CDS             2431..2889
                     /locus_tag="WHR07_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HEZ2129764.1"
                     /translation="METPKLSVEAIEKGTVIDHIPAGRGLTILRQFKLLHYGNAVTVG
                     FNLPSKTQGSKDIIKIKGVCLDDKAADRLALFAPEAVVNTIDNFKVVQKRHLNLPDEI
                     AEVFRCPNTNCAGHGEPVKSRFYVKKHNGQTRLKCHYCEKTYSRDSVAEA"
     gene            2954..3619
                     /locus_tag="WHR07_000513"
     CDS             2954..3619
                     /locus_tag="WHR07_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129765.1"
                     /translation="MMMHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLL
                     SALSAVALVWLAWAFVSARSKAKAEKFYREKMIQNESIHPVLHASLQHLEHKPQMLAL
                     LVKNHGKGMAEQVRFKAEVLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFAD
                     IFELSAALEGRAFKGMLKLTAEYKNIFGDACRSETALDLGALNQALQEISKTSEKSKR
                     IFY"
     gene            complement(3682..4899)
                     /locus_tag="WHR07_000514"
     CDS             complement(3682..4899)
                     /locus_tag="WHR07_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEZ2129766.1"
                     /translation="MQRRIITLLCAAGMAFSTQTLAANLEVRPNAPERYTVKQGDTLW
                     GISGKYLYSPWQWGRLWDANRDQIHNPDLIYPDQVLVLRHVDGEPRLGLEQTDGIPVV
                     KMSPDKEVSGYGIPAIDVNFYRIFMRHPQIVSRKETAAAPRLLSGPEGRLLYTKGTRV
                     YTKGLKEPGRYLTYRINKNITDPDTGKFLGQEVAFSGIVRSLDYTDSVLEQRSKQAGE
                     RPKDNEYHTRTHPLITPLRTPSIQPLVVETAISEIQQGDYLMKMPEDTDRFNMMPHEP
                     SRPVQAKIVSVFEGTRIAGQFQTITIDKGEADGLDKGTVLSLYKRKKTMQVDLSNNFK
                     SRDTVELISTPAEEVGLAMVYRTSEHLSSAIILENISDISVGDTAANPGRDLDNIPDQ
                     GRSRVKFGFDRSE"
     gene            5041..5586
                     /gene="def"
                     /locus_tag="WHR07_000515"
     CDS             5041..5586
                     /gene="def"
                     /locus_tag="WHR07_000515"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEZ2129767.1"
                     /translation="MKNRRRIRRRKEKIMALLNILQYPDERLHTVAKPVEQVDERIRK
                     LIADMFETMYESRGIGLAATQVDVHERVVVMDLTEDRSEPRVFINPVIVEKDGETTYE
                     EGCLSVPGIYDTVTRAERVKVEALNEKGEKFTLEADGLLAICVQHELDHLMGIVFVER
                     LSQLKQGRIKTKLKKRQKHTI"
     gene            5673..6599
                     /locus_tag="WHR07_000516"
     CDS             5673..6599
                     /locus_tag="WHR07_000516"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEZ2129768.1"
                     /translation="MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLT
                     APPVKQAALELGLRVAQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKH
                     GCLNIHASLLPRWRGAAPIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTD
                     TANEVHDALMEIGAAAVVADLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSES
                     AAVIERKIRAFNPVPAAWVEYQGKPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGEN
                     ALKITELQPAGGRRMNIAAFAAGRHIEAGTKL"
     gene            6678..7937
                     /gene="rsmB"
                     /locus_tag="WHR07_000517"
     CDS             6678..7937
                     /gene="rsmB"
                     /locus_tag="WHR07_000517"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HEZ2129769.1"
                     /translation="MSMALAQKLAADSIAAVAEGRNLQDVLAQIRTAHPDLTAQENGA
                     LQDIAYGCQRYLGSLKHMLAQMLKKPIDNPQLESLLLAALYQLHYTRNAPHAVVNEAV
                     ESIAKIGRGQYRSFANAILRRFLRERDKLAASCKKDDVAKHNLPLWWVAYLKNHYPKH
                     WHNITAALQSHPPMTLRVNRRHGNAESYLEKLAAEGIPARALDEYAVTLEEAVPVNRL
                     PGFSDGIVSVQDFGAQQAAYLLNPKDGERILDACAAPGGKTGHILELADCRVTALDID
                     AGRLKRVEDNIARLGFQTASAACADARDLAAWYDGKPFDAILADVPCTASGVARRNPD
                     VKWLRRPTDALKTARQQEALLDALWQTLKQGGRMLLATCSVFVEENDGQLQKFLNRHA
                     DAEPIESRVLLPNKHQDGFYYALIQKH"
     gene            7903..8502
                     /locus_tag="WHR07_000518"
     CDS             7903..8502
                     /locus_tag="WHR07_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HEZ2129770.1"
                     /translation="MAFITRLFKSIKQWLVLLPMLSVLPDAAAEGIDVSRAEARITDG
                     GQLSISSRFQTELPDQLQQALRRGVPLNFTLSWQLSAPIIASYRFKLGQLIGDDDNID
                     YKLSFHPLTNRYRVTVGAFSTDYDTLDAALRATGAVANWKVLNKGALSGAEAGETKAE
                     IRLTLSTSKLPKPFQINALTSQNWHLDSGWKPLNIIGNK"
     gene            8502..10619
                     /locus_tag="WHR07_000519"
     CDS             8502..10619
                     /locus_tag="WHR07_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEZ2129771.1"
                     /translation="MRRFLPIAAICAVVLLYGLTAATGSTSSLADYFWWIVAFSAMLL
                     LVLSAVLARYVILLLKDRRDGVFGSQIAKRLSGMFTLVAVLPGVFLFGVSAQFINGTI
                     NSWFGNDTHEALERSLNLSKSALNLAADNALGNAIPVQIDLISTASLSGNMGRVLEHY
                     ANGFTQLSLYNAASGKIEKSINPHKLDQPFPGKARWEKIQQAGSVRDLESIGGVLYAQ
                     GWLLVGTYNGRDYALFFRQPIPKGVAEDAVLIEKARAKYAELSYSKKGLQTFFLATLL
                     IASLLSIFLALVMALYFARRFVEPVLSLAEGAKAVAQGDFSQTRPVLRNDEFGRLTKL
                     FNHMTEQLSIAKEADERNRRREEAARHYLECVLEGLTTGVVVFDEQGCLKTFNKAAEQ
                     ILGMPLTPLWGSSRHGWHGVSAQQSLLAEVFAAIGAAAGTDKPVHVKYAAPDDAKILL
                     GKATVLPEDNGNGVVMVIDDITVLIHAQKEAAWGEVAKRLAHEIRNPLTPIQLSAERL
                     AWKLGGKLDEQDAQILTRSTDTIVKQVAALKEMVEAFRNYARSPSLKLENQDLNALIG
                     DVLALYEAGPCRFAAELAGEPLMVAADTTAMRQVLHNIFKNAAEAAEEADVPEVRVKS
                     EAGQDGRIVLTVCDNGKGFGREMLHNAFEPYVTDKPAGTGLGLPVVKKIIEEHGGRIS
                     LSNQDAGGACVRIILPKTVKTYA"
     gene            10612..11889
                     /locus_tag="WHR07_000520"
     CDS             10612..11889
                     /locus_tag="WHR07_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HEZ2129772.1"
                     /translation="MRSSDILIVDDEIGIRDLLSEILQDEGYSVALAENAEEARKLRH
                     QVRPAMVLLDIWMPDCDGITLLKEWAKNGQLNMPVVMMSGHASIDTAVEATKIGALDF
                     LEKPISLQKLLSAVENALKHGAAKIETGPVFDKLGNSAAIQEMNREVGAAVKRASPVL
                     LTGEAGSPFETVARYFHKNGTPWVSPARVEYLIDMPMELLQKAEGGVLYVGDIAQYSR
                     NIQAGIAFIVGKAEHRRVRVVASGSRAAGSDGIACEEKLAELLSESVVRIPPLRMQHE
                     DIPFLIQGIACNVAESQKIAPAAFSEEALAALTRYDWPGNFDQLQSVVATLLLEADGQ
                     EIGAAAVSSLLGQNVPAEGAEDMVGGFNFNLPLRELREEVERRYFEYHIAQEGQNMSK
                     VAQKVGLERTHLYRKLKQLGIGVSRRAGEKTEE"
     gene            11980..13167
                     /gene="dprA"
                     /locus_tag="WHR07_000521"
     CDS             11980..13167
                     /gene="dprA"
                     /locus_tag="WHR07_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HEZ2129773.1"
                     /translation="MTEDERFAWLQLAFTPYIGAESFLLLLHHFGSAQNALSAPAEQV
                     AALIRHKQALEAWRNAEKRALARQAAEAALEWEMRDGCRLMLLQDEDFPEMLAQGLTA
                     PPVLFLRGNVRLLHKPSAAIVGSRYATPQAMRIAKDFGRALGGKGIPVVSGMASGIDT
                     AAHQGALQAEGGTIAVWGTGIDRIYPPANKNLAYEIAEKGLIVSEFPIGTRPYAGNFP
                     RRNRLIAALSQVTLVVEAALESGSLITAGLAAEMGREVMAVPGSIDNPHSKGCHKLIK
                     DGAKLTECLDDILNECPGLLQNTGASSYSINKDTPDTGRRAVQTAYAPPPAAKMPSEG
                     AAGGTAVGGILDKMGFDPIHPDVLAGQLAMPAADLYAALLELELDGSVAAMPGGRYQR
                     IRT"
     gene            13193..13654
                     /locus_tag="WHR07_000522"
     CDS             13193..13654
                     /locus_tag="WHR07_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 family protein"
                     /protein_id="HEZ2129774.1"
                     /translation="MTEVIAYLIEHFQDFDTCPPPEDLGMLLEEAGFDTMEIGNTLMM
                     MEVLLNSSEFSAEPADSGALRVYSKEETDNLPQEVMGLMQYLIEEKAVSCEQREIIIH
                     ALMHIPGDEITVDTAKVLTLLLLWANKSELPVLVGDELMSALLLDNKPTMN"
     gene            13726..16032
                     /gene="topA"
                     /locus_tag="WHR07_000523"
     CDS             13726..16032
                     /gene="topA"
                     /locus_tag="WHR07_000523"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HEZ2129775.1"
                     /translation="MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKSGAV
                     DPDNGFAMKYQLISRNGKHVDAIVAGAKEAENIYLATDPDREGEAISWHLLEILKSKR
                     GLKNIKPQRVVFHEITKNAVLDAVAHPREIEMDLVDAQQARRALDYLVGFNLSPLLWK
                     KIRRGLSAGRVQSPALRLICERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGA
                     KLEQFDLPNEAAQADVLKELEGKEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGF
                     TTDRTMRTAQQLYEGIDVGQGAIGLITYMRTDSVNLADEALTEIRHYIENKIGKEYLP
                     SAAKQYKTKSKNAQEAHEAIRPTSVYRTPESVKPFLSADQFKLYQMIWQRTVACQMTP
                     AKFDQTTVDITVGKGVFRVTGQVQTFAGFLSVYEESSDDEEGEDSKKLPEMSEGDKLP
                     VDKLYGEQHFTTPPPRYNEATLVKALEEYGIGRPSTYASIISTLKDREYVTLEQKRFM
                     PTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQLDEIAGGKRQWIPLMDKFWKPFIKQVE
                     EKEGIERAKFTTQELDETCPKCGEHKLQIKFGKMGRFVACAGYPECSYTRNVNETAEE
                     AAERIAKAEAEQAELDGRECPKCGGRLVYKYSRTGSKFIGCANYPKCKHVEPLEKPKD
                     TGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATWNPPVAESCPKCAWPVLTIKT
                     TKRWGVEKVCPQKECGWKEQIEPPAPKE"
     gene            complement(16105..16800)
                     /locus_tag="WHR07_000524"
     CDS             complement(16105..16800)
                     /locus_tag="WHR07_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129776.1"
                     /translation="MMKDLNLSNSLFKGYNDKHGLMICGYEWGWSKADEAAYVAGEYK
                     LPENKIDHTFANKSLYFGEQAKKWRYDNTIKNWFEMWGHPLDENGLGGAFEKSLVQTN
                     WAATQGNTIDNPDKFTQPEHIDNFLYHIEKLRPKVILFMGSRLADFLNNQNVLPRFEQ
                     LVGKQTKPLETVQKEFDGTRFNVKFQSFEDCEVVCFPHPSASRGLSYDYIALFAPEMN
                     RILSDFKTTRGFK"
     gene            17491..17868
                     /locus_tag="WHR07_000525"
     CDS             17491..17868
                     /locus_tag="WHR07_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ2129777.1"
                     /translation="METHEKIRLMRELNKWSQEDMAEKLAMSAGGYAKIERGETQLNI
                     PRLEQLAQIFKIDMWDLLKSGGGGMVFQINEGDSGGDIALYASGDVSMKIEFLKMELK
                     HCKEMLEQKDKEIELLRKLTETV"
     gene            17957..18526
                     /gene="rsmD"
                     /locus_tag="WHR07_000526"
     CDS             17957..18526
                     /gene="rsmD"
                     /locus_tag="WHR07_000526"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HEZ2129778.1"
                     /translation="MAAGKHTKHSNRVRIIGGQCRGRKLSFTSADGLRPTPDSVREKL
                     FNWLGQDLTGKTVLDLFGGSGALGIEAASRNAKRVLISDNNRQTVQTLQKNSRELGLG
                     QVQIVCSDGIAYLKTVSEQFDVVFLDPPFAWQDWQILFDALKPCLNPRAFVYLEAGTL
                     PDIPDWLTEYREGKSGQSTFELRVFQVAE"
     gene            18649..18900
                     /locus_tag="WHR07_000527"
     CDS             18649..18900
                     /locus_tag="WHR07_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HEZ2129779.1"
                     /translation="MSLFITDECINCDVCEPECPNDAISQGEEIYEINPNLCTQCVGH
                     YDEPQCQQVCPVDCILIDEEHPETHDELMAKYEKIIQFK"
     gene            18997..19080
                     /locus_tag="WHR07_000528"
     tRNA            18997..19080
                     /locus_tag="WHR07_000528"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:19031..19033,aa:Tyr,seq:gta)
     gene            19111..19184
                     /locus_tag="WHR07_000529"
     tRNA            19111..19184
                     /locus_tag="WHR07_000529"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:19143..19145,aa:Gly,seq:tcc)
     gene            19194..19268
                     /locus_tag="WHR07_000530"
     tRNA            19194..19268
                     /locus_tag="WHR07_000530"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:19226..19228,aa:Thr,seq:ggt)
BASE COUNT         4759 a         4969 c         5404 g         4182 t
ORIGIN      
        1 catttgtgtt tttgcatcat ttcgtttgat tttctagttt ttgagaatga tacaaagttt
       61 ttttacaaag taaagagtca ctctgaaaaa cattttttca ttataaatca aaatattgat
      121 agaataaata gcgagcatcg attcacggtg tactttagtg caaagcgtac aacgcgagcc
      181 tgaaccacca gccgcaacag gaaaagaaag ccgatagagt gcaatgcttg ccaacgtgca
      241 agcgagcttg caagaacgct tggctcaacg agagcaggca agacagaaag cagaaagcag
      301 gataggagcg gtaacgcaaa ggtctcgggc tttgatttcg ccgtaaacct gagtgccgcc
      361 ttgtccggaa agggtgcagg cggcgagtgc cgacagggtg cagatgggga gggggggttt
      421 catttggggt cgcaacggaa gtggtatgcg cagatttcaa aaccgttttt gaaatacagg
      481 cggtgcgcgt cggcacggtc gtggttgacg tggacgttga ggtggatttt ggttacccct
      541 gtttccgcgc cgattttgcg gacttcttcc aaaaggcgcg aggcgtagcc tttgcggcgg
      601 ctttgcggca gggtaacgat gtcatcgatg tggatgtggc ggccgctggc gagggtgcag
      661 gcttcgcgga agccgcagac ggcgacggca ttgtgtttgc cttcttcaaa aatacccagc
      721 aggcggtagc cttgggggcg ttggactttg ttgatctgtt cggtaaagcg gttgatgtcg
      781 gtcagggcgg aacgcaaaac gctcaaggct gcaaaggcgg tggcggtgtc gtccgcgccg
      841 atttcgcgca aaacgtagga tgcgcccgag gcggtctgtt cctgtgcttt ctcggcggcg
      901 tgtttttctt cgattgcctg tgccagcatg acgtgttcgt cggcagggtt gttttgtccg
      961 ccctgttcgc gttcttcgag cagggctttg cagtcgatga cgcgcaggtc gttgtcggcg
     1021 gcaaagtcca tcaggaagcg gaacatttgg gggttgtcgg tttccagttt tttatcgacg
     1081 gcgacgcagc ggatgttgtc caccagcatg gggcgcaccc atttcgaata ggaaagcctg
     1141 tggtctttgg tgaacgagga cagaatgccg cacaggcgtt ccgcccagtc gctgggacgg
     1201 aaaatcttgc cggaactcgt tgtgccgtgg atgacgactt cgtaggggtt gcagactaac
     1261 atggcggctt cctgaaaaga aatgtctggc gcgattatac cttatgctta tgcgggcgtg
     1321 tttggatatg ccgtctgaaa agtacgggat tcgtgcggta aaactttgcg gcggcaaatg
     1381 tgcgataata cgcgccgtat tgccgctttt gcgaagctgt tccgcaaaca tacgggcggc
     1441 gtggacgacg tataaccgga tacccgcctg acgcgggttt tttacggaag gggggcaaaa
     1501 atgcctaatc cgctttacag acagcatatc atctccattt cggatttgtc gcgcgaacag
     1561 ttggaatgcc tgcttcagac ggcattgaag ctgaaggcgc atccgcgcgg cgatttgttg
     1621 gaaggcaaac ttatcggttc gtgcttcttt gaaccgtcca cgcgcacgag gctgtcgttt
     1681 gaaacggcgg tgcagcggct gggcggcaag gtcatcggct tttcggacgg cgcgaatacc
     1741 agtgccaaaa aaggcgagac gcttgccgat accgcccgca tcatttccgg ctacaccgac
     1801 gcaatcatcc aacgccaccc caaagacggc gcggcgcgcg tggcagcgga gttttcgcgc
     1861 gtccccgtca tcaacgccgg cgacggcacc aaccagcacc ccagccagac cttgttggat
     1921 ctggttacca tttatgaaac gcagggacgt ttggacaagc tcaaaatcgc catggcgggc
     1981 gacttgaaat acggacgtac cgtgcattcg ctttgtcagg cgttgaaacg ctggggctgc
     2041 gaatttgcct ttgtttcgcc gcccagcctc gcgatgcccg actacattac cgaagagttg
     2101 gacgaagccg gctgccgata ccgtatcctc ggtagtttgg aagaagcggc ggaatgggcg
     2161 gacatcctgt atatgacccg tgttcaacgc gaacgtttcg acgaacagga atttgccaaa
     2221 atccaaggca aattcaatct cgacgcatcc atgcttgccc gcgccaaacc gaacctgcgc
     2281 gtgctgcacc ctttgccgcg cgtggacgaa atccatcccg atgtcgatgc tacgccgcat
     2341 gcctattatt tcgagcaggc gaccaacggc gtttatgcgc gtatggcgat attgtcgctg
     2401 gtgttgaacg aagaagtgtg aggaaccgat atggaaaccc cgaaactcag tgtcgaagcc
     2461 attgaaaaag gtacggttat cgaccatatt cccgccggca gggggctgac catcctgcgc
     2521 cagttcaaac ttttgcacta cggcaacgcg gtaaccgtgg gcttcaacct gcccagcaaa
     2581 acccaaggca gcaaagacat catcaaaatc aaaggcgtgt gcttggacga caaagccgcc
     2641 gaccgcctcg ccctgttcgc ccccgaagcg gtggtcaata ccatcgacaa tttcaaggtc
     2701 gtgcagaagc ggcatttgaa cctgcccgat gaaattgccg aagtgttccg ttgcccgaac
     2761 acgaattgcg ccggccacgg cgagccggtc aaaagccggt tttatgttaa aaaacacaac
     2821 gggcagacgc ggctgaaatg ccattactgc gaaaaaacct acagccggga ttcggtggcg
     2881 gaagcctgac ggattccctt aaaccgagcg ggcggcattt cgtctgccgc ttgttttgcc
     2941 aatctgaaat ggaatgatga tgcacgcttc tgtccaaagc cgtttcgcac cgatacttta
     3001 tgttttgatt ttctttgccg gttttttgac cgcgcaaatt tggttcaatc agaaagccta
     3061 tactgaagag ctgcctccgc ttctgtccgc attgtccgcc gtcgcgctgg tgtggctggc
     3121 gtgggcgttc gtgtcggcgc gttcaaaggc taaggcggaa aagttctacc gcgaaaaaat
     3181 gatacagaac gaaagcatac accccgtcct gcacgcttct ttgcaacact tggaacacaa
     3241 gccgcaaatg ctcgccctgc tggtcaaaaa ccacggcaaa gggatggcgg aacaggtcag
     3301 gttcaaggcg gaagtgctgc ccgacgacga agacgcgcgc acgattgccg ccgagttggc
     3361 aaaaatggat atgtttgcat tggggacgga cgcggtcgcc tcgggcgaaa cctatggacg
     3421 cgtgttcgcc gatattttcg agttgtcggc ggctttggaa gggcgcgcgt tcaaaggaat
     3481 gttgaaactg acggcggaat ataaaaacat cttcggcgat gcctgccgtt cggaaacggc
     3541 gttggatttg ggcgcgctca atcaggcgtt gcaggagatt tcaaaaacat cggaaaagtc
     3601 caaacggata ttttattgaa gatggaaaaa tgccgtctga aacggaaggt gtttcagacg
     3661 gcatttttgt cggatgatta attattcgga gcggtcgaag ccaaacttca cgcggctgcg
     3721 gccctgatcc ggtatattgt ccaaatcgcg tcccggattg gcggcggtgt cgcctacgga
     3781 aatatcggag atgttttcca aaatgatggc ggacgacagg tgttcggagg tgcggtaaac
     3841 cattgccaag cccacttctt cggcaggagt ggaaatcagc tcgacggtat ccctgctttt
     3901 gaaattgttg gagaggtcga cctgcatcgt tttcttgcgt ttgtagaggc tcaaaaccgt
     3961 gcctttgtcc aaaccgtccg cctcgccttt gtcgatggtg atggtttgaa actggccggc
     4021 aatccttgta ccttcaaaca cggaaacgat tttagcctga accgggcggg acggttcgtg
     4081 cggcatcatg ttgaagcggt cggtgtcttc cggcattttc atcaggtagt cgccctgctg
     4141 tatttcggaa atggcggttt cgaccaccag cggctgtatc gaaggggtgc gcagcggggt
     4201 aatcaaagga tgggtgcggg tatggtattc gttgtctttc ggccgttctc cagcctgttt
     4261 cgagcgttgt tcgaggacag agtcggtata gtcgagggag cgcacgatgc cgctgaatgc
     4321 gacttcctgc ccgaggaatt tacccgtatc cggatcggtg atgtttttat tgattcggta
     4381 ggtcaggtag cggcccggct ctttcaggcc tttggtgtaa accctggtgc ctttggtgta
     4441 cagcagcctg ccttccgggc ccgagagcag gcgcggcgcg gcagcggttt ctttgcggga
     4501 aacgatttgc gggtgccgca taaagatgcg gtagaagttg acatcgatgg cgggaatacc
     4561 gtatccggac acttccttat ccggactcat tttgacgacg gggatgccgt ctgtctgttc
     4621 caagccgagg cgcggttcgc cgtcaacgtg gcgcaacacc aatacctggt ccggataaat
     4681 caggtcggga ttgtggattt gatcccggtt cgcgtcccac aggcggcccc attgccacgg
     4741 gctgtacagg tatttgcccg aaatgcccca cagggtgtcg ccctgtttga ccgtgtagcg
     4801 ttccggcgcg ttcgggcgca cctccaaatt tgccgccaaa gtttgtgttg agaatgccat
     4861 acctgccgcg cagagcaggg ttataatacg acgttgcata accgttcccc ttatctgata
     4921 aatttcggtt tgtcttgctt gattgggttg gaaaaagcgg cggcagcccc tcgggatgtg
     4981 ccgcgtgata aaaaatgttc cgcattttaa catcgaatta tccgcaccat cacggtaatt
     5041 atgaaaaaca ggcggcgtat ccgccgaagg aaagagaaaa ttatggcttt attgaatatc
     5101 ttgcaatatc ccgacgagcg tctgcacacg gtggcaaagc ctgtcgaaca agtcgacgag
     5161 cgcatccgga agctgattgc cgatatgttt gaaacgatgt acgaatcgcg cggcatcggg
     5221 ctggcggcga cgcaggtcga tgtgcacgag cgcgtggtcg tgatggattt gaccgaagac
     5281 cgcagcgaac cgcgcgtgtt catcaacccc gtcatcgttg aaaaagacgg cgaaaccact
     5341 tacgaagagg gctgcctgtc cgtgccgggc atttacgaca ccgtaacccg cgccgaacgc
     5401 gtcaaggtcg aggctttgaa cgaaaaaggc gaaaagttca cgctggaggc ggacggcttg
     5461 ctggcgattt gcgtgcagca cgagttggac cacctgatgg gcatcgtgtt tgtcgaacgc
     5521 ctgtcgcagc tcaagcaggg acgcatcaaa accaagctga aaaaacgtca gaaacatacg
     5581 atttgaccct tttgccgtgc cgtctgaacg ctgcaaagtt ttcagacggc acggtcttgt
     5641 ccgacaacct tacgcatacg caggaatatg ctatgaaagt catctttgcc ggcacgcccg
     5701 attttgccgc cgccgcctta aaagccgttg ccgccgccgg ttttgaaatc ccgctggtgc
     5761 tgacccagcc cgaccgtccg aaagggcgcg gtatgcaact gaccgccccg cccgtcaaac
     5821 aagccgcgct ggaactcggt ttgcgcgtgg cacagcccga aaaactgcgt aacaacgccg
     5881 aagccctgca aatgctcaaa gaggtcgagg cagacgtaat ggtggttgcc gcctacggtt
     5941 tgattctgcc gcaggaagtg ttggatacgc cgaaacacgg ctgcctcaac atccacgctt
     6001 cgctgttacc ccgttggcgt ggcgcggcgc cgattcaacg cgcgattgaa gccggcgatg
     6061 ccgagacagg cgtgtgtatt atgcagatgg acatcggttt ggacaccggc gatgtggtca
     6121 gcgaacaccg ctacgccatc caaccgaccg ataccgccaa cgaagtccac gacgcgctga
     6181 tggaaatcgg tgcggcggcg gttgttgccg atttgcaaca gcttcaaagc aaaggccgtc
     6241 tgaacgcggt caaacagccc gaagaaggtg ttacttacgc ccaaaaacta agcaaagaag
     6301 aggcgcgtat cgattggagc gaaagcgcgg cggttatcga acgcaaaatc cgcgccttca
     6361 accccgtgcc tgccgcgtgg gttgagtatc agggcaagcc gatgaaaatc cggcgggcgg
     6421 aagtggtggc gcaacaaggc gcggcaggcg aagtgttgtc ctgttcggcg gacggtttgg
     6481 tcgttgcctg cggcgaaaac gcgctgaaga ttaccgaatt gcagcctgcc ggcggcaggc
     6541 gtatgaatat cgcggcgttt gcagcaggac ggcatatcga agcagggacg aagctgtaaa
     6601 tcccttcaga cggcattccg atccgcaaac gggaatgccg cctgaaacca tcagttgaag
     6661 aaagcgaatc acataatatg agtatggcac ttgcccaaaa acttgccgcc gacagcattg
     6721 cggcggttgc cgaaggacgc aaccttcagg acgtgttggc gcaaatccgc accgcgcatc
     6781 ccgaccttac ggcacaggaa aacggcgcgt tgcaggacat cgcctacggc tgccagcgtt
     6841 atttgggcag tttgaaacat atgctcgcgc agatgctgaa aaagccgatt gacaacccgc
     6901 agctcgaaag cctgcttttg gcggcgttgt accaactgca ttacacgcgc aacgcgccgc
     6961 acgccgtggt caacgaagcg gtggaaagca tagccaaaat cggacgcggg cagtaccgtt
     7021 cgtttgccaa cgcgattttg cgccgctttt tgcgcgaacg cgacaagctt gcggcttcct
     7081 gtaaaaaaga cgatgtggcg aaacacaacc tgccgctgtg gtgggtggct tacctgaaaa
     7141 accattatcc gaaacactgg cacaacatca ccgccgcgct acaatcccat ccgccgatga
     7201 cgttgcgcgt caaccgccga cacggcaatg ccgaaagcta tttggaaaaa ctggctgcgg
     7261 aaggtattcc ggccagggcg ttggacgaat atgcggttac gttggaagaa gccgtgccgg
     7321 taaaccgtct gcccggtttt tcagacggca ttgtttcggt acaggacttc ggtgcgcagc
     7381 aggcggcgta tcttcttaac ccgaaagacg gcgaacggat tttggacgcg tgcgccgcgc
     7441 cgggcggcaa gacggggcat atcttggaac tggcggattg ccgcgttacc gccttggaca
     7501 tcgatgcagg ccgtctgaag cgtgtggagg acaatatcgc ccgtttgggc tttcagacgg
     7561 catcggcggc gtgtgccgat gcgcgggatt tggcggcgtg gtatgatgga aagcctttcg
     7621 acgcaatcct tgccgacgtg ccatgcaccg cttccggcgt ggcgcggcgc aatcccgacg
     7681 tgaaatggct gcgccgtccg accgacgcgc tcaaaaccgc ccgccagcag gaagccctgc
     7741 tggacgcact ttggcagacg ctgaaacagg gcggcagaat gctgcttgcc acctgttccg
     7801 tgttcgtcga agaaaacgac gggcaattgc aaaaattcct caaccgccat gccgatgccg
     7861 aaccgatcga atcgcgggtg cttttaccga acaaacacca agatggcttt tattacgcgc
     7921 ttattcaaaa gcattaaaca atggcttgtg ctgctgccga tgctttccgt tttgccggac
     7981 gcggcggcgg aggggataga tgtgagccgc gccgaagcga ggataaccga cggcgggcag
     8041 ctttccatca gcagccgctt ccaaaccgag ctgcccgacc agctccaaca ggcgttgcgc
     8101 cggggcgtgc cgctcaactt taccttaagc tggcagcttt ccgccccgat aatcgcttct
     8161 tatcggttta aattggggca actgattggc gatgacgaca atattgacta caaactgagt
     8221 ttccatccgc tgaccaaccg ctaccgcgtt accgtcggcg cgttttcgac agactacgac
     8281 accttggatg cggcattgcg cgcgaccggc gcggttgcca actggaaagt cctgaacaaa
     8341 ggcgcgctgt ccggtgcgga agcaggggaa accaaggcgg aaatccgcct gacgctgtcc
     8401 acttcaaaac tgcccaagcc atttcaaatc aatgcattga cttctcaaaa ctggcatttg
     8461 gattcgggtt ggaaacctct aaacatcatc gggaacaaat aatgcgccgt tttctaccga
     8521 tcgcagccat atgcgccgtc gtcctgttgt acggactgac ggcggcaacc ggcagcacca
     8581 gttcgctggc ggattatttc tggtggatag ttgcgttcag cgcaatgctg ctgctggtgt
     8641 tgtccgccgt tttggcacgt tatgtcatat tgctgttgaa agacaggcgc gacggcgtat
     8701 tcggttcgca gattgccaaa cgcctttctg ggatgtttac gctggttgcc gtactgcccg
     8761 gcgtgtttct gttcggcgtt tccgcacagt tcatcaacgg tacgattaat tcgtggttcg
     8821 gcaacgatac ccacgaggcg cttgaacgca gcctcaattt gagcaagtcc gcattgaatc
     8881 tggcggcaga caacgccctt ggcaacgcca tccccgtgca gatagacctc atcagcaccg
     8941 cctccctatc cggcaatatg ggcagggtgc tggaacatta tgccaacggg tttacacagt
     9001 tgtcccttta caatgccgca agcggcaaaa tcgaaaaaag catcaacccg cacaagctcg
     9061 atcagccgtt tccaggtaag gcgcgttggg aaaaaatcca acaggcgggt tcggtcaggg
     9121 atttggaaag cataggcggc gtattgtacg cgcagggctg gctgctggtg ggtacataca
     9181 acggacgcga ttacgcgctg ttttttcgtc agcccattcc caaaggcgtg gcagaggatg
     9241 ccgtcttaat cgaaaaggca agggcgaaat atgctgagtt gagttacagc aaaaaaggtt
     9301 tgcagacctt tttcctggca accctgctga ttgcctcgct gctgtcgatt tttcttgcac
     9361 tggtcatggc actgtatttc gcccgccgtt tcgtcgaacc cgtcctatcg cttgccgagg
     9421 gggcaaaggc ggtggcgcaa ggcgatttca gccagacgcg ccccgtgttg cgcaacgacg
     9481 agttcggacg cttgaccaag ttgttcaacc acatgaccga gcagctttcc atcgccaaag
     9541 aagcagacga gcgcaacagg aggcgcgaag aagccgccag acattatctt gaatgcgtgt
     9601 tggaggggct gaccacgggc gtggtggtgt ttgacgaaca aggctgtctg aaaaccttca
     9661 acaaagcggc ggaacagatt ttggggatgc cgcttacccc cctgtggggc agcagccggc
     9721 acggttggca cggcgtttcg gcgcagcagt ccctgcttgc cgaagtgttt gccgccatcg
     9781 gcgcggcggc aggtacggac aaaccggtcc atgtgaaata tgccgcgccg gacgatgcca
     9841 aaatcctgct gggcaaggca accgtcctgc ccgaagacaa cggcaacggc gtggtaatgg
     9901 tgattgacga catcaccgtt ttgatacacg cgcaaaaaga agccgcgtgg ggcgaagtgg
     9961 ccaaacggct ggcacacgaa atccgcaatc cgctcacgcc catccagctt tccgccgaac
    10021 ggctggcgtg gaaattgggc gggaagctgg atgagcagga tgcgcaaatc ctgacgcgtt
    10081 cgaccgacac catcgtcaaa caggtggcgg cattgaagga aatggtcgaa gcattccgca
    10141 attatgcgcg ttccccttcg ctcaaattgg aaaatcagga tttgaacgcc ttaatcggcg
    10201 atgtgttggc attgtatgaa gccggtccgt gccggtttgc ggcggagctt gccggcgaac
    10261 cgctgatggt ggcggcggat acgaccgcca tgcggcaggt gctgcacaat attttcaaaa
    10321 atgccgccga agcggcggaa gaagccgatg tacccgaagt cagggtaaaa tcggaagcgg
    10381 ggcaggacgg tcggattgtc ctgacggttt gcgacaacgg caaagggttc ggcagggaaa
    10441 tgctgcacaa cgccttcgag ccgtatgtaa cggacaaacc ggcgggaacg ggattgggtc
    10501 tgcctgtggt gaaaaaaatc attgaagaac acggtggccg catcagcctg agcaatcagg
    10561 atgcgggtgg ggcgtgtgtc agaatcatct tgccaaaaac ggtaaaaact tatgcgtagc
    10621 agcgatattt taattgtaga cgacgaaatc ggcatccgcg acctgctgtc ggaaatcctg
    10681 caggacgaag gttattcggt cgcattggcg gaaaacgccg aagaggcgcg caagctgcgc
    10741 catcaggtac gcccggcgat ggtgttgctg gatatttgga tgcccgattg cgacggcatc
    10801 acccttttga aggagtgggc gaaaaacggg cagctcaata tgccggtggt gatgatgagc
    10861 gggcatgcca gcatcgatac cgccgtagaa gcgaccaaaa tcggcgcgct cgactttttg
    10921 gaaaaaccga tttccctgca aaagctgctg tctgccgtcg aaaacgcgtt gaaacacggt
    10981 gcggcgaaaa tcgaaacggg accggtgttc gacaagctgg gcaacagtgc ggcgattcag
    11041 gaaatgaacc gtgaggtagg ggctgcggtg aaacgtgcct ctcccgtact tttgacgggc
    11101 gaggcgggtt cgccgtttga aacggtggca cgctatttcc ataaaaacgg tacgccgtgg
    11161 gtcagcccgg caagggtcga atatctgatc gatatgccga tggaactgtt gcagaaggcg
    11221 gagggcggcg ttttgtatgt cggcgacatc gcccagtaca gccgcaacat ccaagccggt
    11281 attgccttta ttgtcggcaa ggcggaacac cgccgcgtca gggtggtcgc atcgggcagc
    11341 agggcggcag gttcagacgg catagcctgc gaggaaaagc tggcggaact gctgtcggag
    11401 tcggtcgtcc gcattccgcc gctgcgtatg cagcatgaag atattccctt cctgatacag
    11461 gggattgcct gcaatgtggc ggaaagtcaa aagattgcgc ccgccgcatt cagtgaagag
    11521 gcacttgccg cattgacccg ttacgactgg ccgggaaatt tcgaccaact gcaaagcgtc
    11581 gttgcaacgc tgttgttgga ggcggacgga caggaaatcg gcgcggcggc ggtttcttcc
    11641 cttttggggc agaatgtgcc tgccgaggga gcggaagata tggtgggcgg gtttaatttc
    11701 aacctgcccc tgcgcgaatt gagggaggag gtggagcggc gttatttcga gtaccacatc
    11761 gcccaagaag gtcagaatat gagcaaagtg gcgcagaagg tcggtttgga acgcacgcac
    11821 ctttaccgca aactcaaaca gctcggcatc ggcgtttcgc gccgggcggg ggaaaaaacc
    11881 gaagaatagg cccggacggt cggttttccg gctgcgggct tttgttttca gacggcattt
    11941 ggtgcaaatg ccgtctgaaa tcgtaagggg acggatttta tgacagagga cgaacgtttc
    12001 gcgtggttgc aactggcttt tacgccctat atcggtgcgg aaagtttctt gctgctgctg
    12061 caccatttcg gcagtgcgca aaatgccctg tccgcaccgg cggaacaggt ggcggcactg
    12121 atacggcaca aacaggcgct tgaggcttgg cgcaatgcgg aaaaacgcgc cttggcgcgg
    12181 caggcggcag aagcggcgtt ggaatgggaa atgcgggacg gatgccgtct gatgctgctt
    12241 caggatgaag atttccccga aatgctggcg caggggctga ccgcgccgcc agttttgttt
    12301 ttgcgcggca acgtgcggct gctgcacaag ccttccgctg ccatcgtcgg cagccgctat
    12361 gccacgccgc aggcgatgcg gattgccaaa gatttcggca gggcgttggg tgggaaaggc
    12421 attcccgtcg tgtcgggtat ggcttcgggc atcgacaccg ccgcccatca gggcgcgttg
    12481 caggcagaag gcggcaccat cgccgtgtgg gggacgggca tagaccgcat ttatccgcca
    12541 gccaacaaaa accttgctta tgaaatcgcc gaaaaaggac tgattgtcag cgagttcccc
    12601 atcggcacgc ggccgtatgc cggcaatttt ccgcgccgca accgtctgat tgctgccctg
    12661 tcgcaggtta cgctggtggt tgaagccgcg ttggaatccg gttcgctgat taccgccggc
    12721 ctggcggcag aaatggggcg cgaagtgatg gcggtacccg gctcgataga caatccgcac
    12781 agcaaaggct gccacaaact gattaaagac ggcgcgaaac tgacggaatg tttggacgac
    12841 atcctgaacg aatgcccggg gctattgcaa aatacgggtg cttcatcata ttctataaat
    12901 aaggatacgc ccgacacggg ccgccgcgcc gttcagacgg catacgcccc gccgcctgcc
    12961 gcaaaaatgc cgtctgaagg ggcggcaggc ggcacagccg tcggcggcat actggataaa
    13021 atgggtttcg accccatcca tcccgacgtg cttgccggac agttggctat gcctgccgca
    13081 gatttgtatg ccgcactgtt ggaattggaa ttggacggca gcgttgccgc aatgcccggc
    13141 ggcagatacc agcgtatccg aacttgaacg cactttatat taaggaacac gaatgaccga
    13201 agtcatcgcc tacctcatcg aacatttcca agatttcgat acctgtccgc cgcccgaaga
    13261 cttgggtatg ctgcttgaag aagcgggttt cgatacgatg gaaatcggca acaccctgat
    13321 gatgatggaa gtattgctca acagctccga attttccgcc gaacctgccg acagcggcgc
    13381 attgcgcgtg tacagcaaag aagaaaccga caacctgccg caggaagtga tggggctgat
    13441 gcagtatctg attgaagaaa aagccgtcag ctgcgaacag cgggaaatca tcatccacgc
    13501 gctcatgcac attccgggcg acgaaattac cgtagatacc gccaaagtgc tgaccctgct
    13561 gcttttatgg gcaaacaaga gcgagctgcc cgtgttggtc ggcgacgagc tgatgagcgc
    13621 gcttttactc gacaacaaac ccacgatgaa ctgaagcggc ttcagacggc ccgcccgagg
    13681 ccgtctgaaa cgccggcatc aaaaccacca tccagagaac gacaaatggc gaaaaaccta
    13741 ttaatcgtcg aatccccgtc caaagccaaa accctgaaaa aatatttggg cggcgatttt
    13801 gaaatccttg catcctacgg acacgtccgc gacctcgtcc ccaaaagcgg cgcggtcgat
    13861 cccgacaacg gctttgcgat gaaataccaa ctcatcagcc gcaacggcaa acacgtcgat
    13921 gccatcgtcg ccggtgccaa agaagctgaa aacatctacc tcgccaccga cccggatagg
    13981 gaaggcgaag ccatttcctg gcatcttttg gaaatcctca aatccaaacg cggcttgaaa
    14041 aacatcaagc cgcagcgtgt cgtgttccac gaaatcacca aaaacgccgt gctcgatgcc
    14101 gttgcccatc cgcgcgaaat cgaaatggac ttggtcgatg cgcaacaagc ccgccgtgct
    14161 ttggactatt tggtcggctt taacctttcg ccattgttat ggaaaaaaat ccgccgaggt
    14221 ttgagcgcgg ggcgtgtgca aagccctgct ttgcgcctga tttgtgagcg cgaaaacgag
    14281 atccgcgcgt ttgaagcgca ggaatattgg acggtacatc ttgacagtca caaaggacgc
    14341 agcaagttca ccgccaaact cgcccaatac aacggcgcga aactcgaaca attcgacctg
    14401 ccgaacgaag ccgcgcaagc cgacgtgttg aaagaactcg aaggcaaaga ggccgtcgtt
    14461 accgccattg aaaagaaaaa gcgcagccgc aatcctgccg cgccgttcac cacttctacc
    14521 atgcagcagg atgccgtgcg caaactcggc ttcaccaccg accgcaccat gcgtaccgcc
    14581 caacagcttt atgaaggtat agacgtaggg cagggcgcga tcggtctgat tacctatatg
    14641 cgtactgaca gcgtgaattt ggcggatgaa gcgttaaccg aaatccgcca ttacatcgaa
    14701 aacaaaatcg gcaaagaata tctgccgagt gccgccaaac aatacaaaac caaatccaaa
    14761 aacgcccaag aagcgcacga agccatccgt ccgacttccg tgtaccgcac gcccgaaagc
    14821 gtcaaaccct tcctgagcgc agaccagttc aaactctatc aaatgatttg gcagcgtacc
    14881 gtcgcctgtc agatgacgcc tgccaaattc gaccaaacca ccgtcgatat taccgtcggc
    14941 aaaggcgtat tccgcgtaac cggacaagtg caaaccttcg caggcttctt gagcgtttat
    15001 gaagaaagca gcgacgatga agaaggcgaa gacagcaaaa aactgcccga aatgagcgaa
    15061 ggcgataaat tgcccgtgga caaactctac ggcgaacaac actttaccac tccgccgcca
    15121 cgctacaacg aagccacgct ggttaaagcc ctcgaagaat acggcatcgg ccgcccctcg
    15181 acctacgcca gcatcatctc cacgctcaaa gaccgcgaat acgttaccct tgagcaaaaa
    15241 cgcttcatgc ccaccgacac aggcgacatc gtcaacaaat tcctgaccga acacttcgcc
    15301 caatacgtcg attaccactt taccgccaaa ctcgaagacc agcttgacga aatcgccggc
    15361 ggcaaacgcc aatggattcc cttgatggac aaattctgga aaccgttcat caaacaagtg
    15421 gaagaaaaag aaggcatcga acgcgccaaa tttaccacgc aggaacttga tgaaacctgc
    15481 ccgaaatgcg gcgaacacaa actgcaaatc aagttcggca aaatgggccg tttcgttgcg
    15541 tgtgccggct atcccgagtg cagctacacg cgcaatgtca atgaaaccgc cgaagaagcc
    15601 gcagagcgca tcgccaaagc cgaagccgaa caggcagaac tcgacggacg cgaatgtcct
    15661 aaatgtggtg gacggctggt gtacaaatac agccgtaccg gcagtaaatt catcggttgc
    15721 gccaactacc ccaaatgcaa acacgtcgag ccgctggaaa aaccgaaaga taccggcgtc
    15781 cagtgtccgc aatgtaaaaa aggcaacctc gtcgagcgta aatcccgcta cggcaaactg
    15841 ttttacagtt gcagcaccta tcccgactgt aactacgcca catggaaccc acccgttgca
    15901 gaaagctgtc caaaatgcgc atggccggtt ttgaccatca aaaccaccaa acgctggggt
    15961 gtagaaaaag tctgcccaca aaaagaatgc ggctggaaag aacagattga accgcccgcg
    16021 ccgaaggagt aagattaggt tggtttgaaa gagaaaaggt cgtctgaaaa attttcagac
    16081 gacctttgct tttctgtgat tggtttattt gaatccgcgt gttgttttaa agtccgataa
    16141 aatccggttc atttcaggcg caaacaaggc gatgtaatcg taagatagac cgcgactggc
    16201 actgggatgg ggaaagcaga cgacttcgca atcttcaaac gattggaatt tgacattgaa
    16261 acgtgtaccg tcaaattctt tttgcaccgt ctccagcggt ttggtctgct taccgaccaa
    16321 ctgctcgaag cgtggcagta cattttggtt gttcagaaaa tccgccaacc tgctgcccat
    16381 gaagaggatg actttcggac gcagtttttc gatgtggtag agaaaattat cgatgtgctc
    16441 gggttgtgtg aacttgtctg gattgtcgat agtgttgccc tgtgtagcag cccagttggt
    16501 ttgaaccagg gatttttcaa atgcaccgcc caatccattt tcgtctaagg ggtgtcccca
    16561 catttcaaac caatttttta tcgtattatc gtaacgccac ttttttgcct gctctccgaa
    16621 atagagggat ttgtttgcaa atgtatggtc gattttgttt tcagggagtt tgtattcacc
    16681 tgctacataa gcagcctcat cggctttact ccaaccccat tcatagccac aaatcattaa
    16741 gccatgtttg tcgttgtagc ctttgaacag gctgttgctc aaattcaaat ccttcatcat
    16801 gaactcttcc ttttaaaatt taagagcgat tgacttcaat gtttttagat ggggtggaaa
    16861 aatccttgtg taggcaacat aaattcaata aatttcttga taattcgaaa cctactaata
    16921 gcgcacctat aaaagctttt tcattacgtt cagcatgacg gtcacgtcgt tcatattttt
    16981 tacgcttgct gttccctgtt attacagcta agccaagtga tatggcgaga attgcccaaa
    17041 caatagtact taaataacaa ttttccccat actatcaata aggaaagaaa aaacctttta
    17101 gtattaggtc gatagattat aatccatgcc catgaaaatg caataagagt tatacataag
    17161 atacaagctg acaggatttc tttattttta attaaataac ttagagcgat gaggatgaca
    17221 ggtgtcaaga aaataatagt tacatcccga tagctataaa agaaaactgc cctattttga
    17281 atgtggagat gtgcacagaa tccaatatag ctaaggataa tagttaatat aataaaaaaa
    17341 gaccaccaag ggtgaagaga taggaattcc atgttttccc tttttttgta aaaaggaaaa
    17401 aatcttatct aatagttaat tgcctaacca gccagaagaa gtttaaaatc tatcccaata
    17461 attcaaccat ctatacagaa agttcagctt atggaaaccc acgaaaaaat ccgcctgatg
    17521 cgcgaattga ataaatggtc ccaggaggat atggcggaaa agctggcgat gtcggcagga
    17581 gggtatgcca aaatcgaacg gggcgaaacg cagttgaata tcccgcgttt ggagcagttg
    17641 gctcagattt tcaaaatcga tatgtgggac ttgctcaaat cgggcggtgg tgggatggtg
    17701 tttcagatta atgaaggtga tagtggtggc gatattgcgt tgtatgcgtc gggtgatgtt
    17761 tcgatgaaaa tagaattttt aaaaatggag ttgaaacact gcaaagaaat gttggaacaa
    17821 aaagacaaag aaatcgagct gctccgcaag ctgaccgaaa ccgtttaaac agatatgccg
    17881 tctgaaaaaa gttttcagac ggcatattct ttgacaggtc ttgtataata ccgtttgaac
    17941 ttacaggttt ttgattatgg cggcaggcaa acataccaaa cacagcaacc gggtacgcat
    18001 tatcggcggg caatgccggg gcaggaaatt gagtttcaca tccgccgacg gactgcgtcc
    18061 gacacccgac agcgtgcgtg aaaagctgtt taactggctg ggacaggatt tgacgggtaa
    18121 aacggttttg gatctcttcg gaggcagcgg cgcactcggt atagaagccg cttcgcgcaa
    18181 cgccaaacgc gtgctgattt cggataacaa ccgccaaacc gtgcagacct tgcagaaaaa
    18241 cagtcgcgaa ctgggtttgg ggcaggtgca aatcgtctgt tcagacggca tcgcatattt
    18301 gaagaccgta tccgaacagt ttgatgttgt ctttctcgac ccgccgtttg catggcagga
    18361 ctggcaaatc ctgtttgatg ccttgaagcc gtgcctgaac ccccgagcat tcgtctatct
    18421 cgaggcgggt acgctgccgg atattcccga ttggctgacg gaatatagag aagggaaatc
    18481 ggggcagagt acattcgaat taagggtttt ccaagtggct gaataatatg cgctttgata
    18541 atcatttccg agttgtaaac attcgtttgc aaccgtccgg ttcaaaaaaa ccttgtgcta
    18601 taatccgcgc ccgcccggtt ttgataattt agtggaaaag gaaaagaaat gtcgcttttt
    18661 attaccgacg agtgcatcaa ctgcgacgta tgcgaacccg aatgccccaa tgatgccatt
    18721 tcccaaggcg aggaaattta cgaaatcaac cccaacctct gcacgcagtg cgtcggacac
    18781 tacgatgagc cgcagtgcca gcaggtttgc ccggtggact gcatcctgat tgacgaagaa
    18841 catcccgaaa cccatgacga gttgatggcg aaatacgaaa agattatcca gtttaaataa
    18901 attcttttta aaacatcaaa ttatgtctgt tttgaaataa aatcaaaaaa aaacttgacg
    18961 gaaaagcaag ccgctaataa actaacgttc tcttttggag ggattcccga gcggtcaaag
    19021 ggggcagact gtaaatctgt tgcgaaagct tcgaaggttc gaatccttct ccctccacca
    19081 aaattcttac ttggggcagt agcgagtaat gcgggtgtag ctcaatggta gagcagaagc
    19141 cttccaagct tacggtgagg gttcgattcc cttcacccgc tccaaacaat taggcccatg
    19201 tagctcaggg gtagagcact cccttggtaa gggagaggtc ggcagttcaa atctgcccat
    19261 gggcaccatc tctcgattat tcatttcttt aaggcttaga tatataggat attg
//
LOCUS       DAWGKF010000021        18845 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.021, whole genome shotgun sequence.
ACCESSION   DAWGKF010000021 DAWGKF010000000
VERSION     DAWGKF010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18845)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18845)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18845
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.021"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            52..1005
                     /locus_tag="WHR07_000531"
     CDS             52..1005
                     /locus_tag="WHR07_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEZ2129780.1"
                     /translation="MTHTVHLHLEETDNLALQRLCGSFDNNLDLLAKALDIHISRRFE
                     HFTFNGAFAHAGKRALLKLLETAQTRDLNDGDIRLAAVEAQTEDAGHQEKNHDHAYYF
                     RTKRGSIGGRTPRQNGYIRALLNHDIVFGLGPAGTGKTYLAVAAAVDAMEKHQVERII
                     LVRPAVEAGEKLGFLPGDLTQKVDPYLRPLYDALYDLMGFDRVSKLIEKGLIEIAPLA
                     YMRGRTLNGAYIILDEAQNTTPEQMKMFLTRIGFGAKAVITGDTSQIDLPKNIKSGLK
                     DAREKLHNVEGLYFHTFTGEDVVRHPLVQKIVEAYESAEHD"
     gene            complement(1109..1432)
                     /locus_tag="WHR07_000532"
     CDS             complement(1109..1432)
                     /locus_tag="WHR07_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129781.1"
                     /translation="MKKCILGILTACAAMPAFADRIGDLEARLAQLEHRVAVLESGSN
                     TVKIDLFGSNSTMYVCSVTPFQKTFEASDRNEGVARQKVRQACNRETSAMFCEDEAIR
                     CRKFD"
     gene            complement(1605..2966)
                     /locus_tag="WHR07_000533"
     CDS             complement(1605..2966)
                     /locus_tag="WHR07_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HEZ2129782.1"
                     /translation="MLKKWLNKMLPSGRSSKKAESKTVIPAERHNIRAEMLSFAAENV
                     IRRLKGAGFQAYVVGGAVRDLLLGIEPKDFDVATDATPEQVHKLFRRSRIIGRRFQIV
                     HVMNGAEIIEVTTFRGGAKVHQNAHGRIMKDNTYGSIEEDAMRRDFTCNALYYDPEKE
                     EILDFHNGIADVAARRLVMIGDAAERYQEDPVRILRAIRLSGKLGFELSEETTAPIAE
                     SICRLKHEPVARLFDEIMKLLFSGHARECLKRLNGFDIPDDIHPLLNALRVSDGIAGK
                     MTVLALKNTDERLRADKSVSVGFVLAALMWPELERHWKSNLQQGLKPAPALSDAINTM
                     RETVERGWGVPQRFSATMREIWMFQPQFENRKGARPHKLFAQARFRAAYDFLLLRAET
                     GNADRALAEWWTAFQTASQEQRTEMTKNEAAARHEKNEGQAKKRRRRRRKPKPKVEGT
                     DWE"
     gene            complement(3327..5027)
                     /gene="recJ"
                     /locus_tag="WHR07_000534"
     CDS             complement(3327..5027)
                     /gene="recJ"
                     /locus_tag="WHR07_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HEZ2129783.1"
                     /translation="MSVKIQTRSINTDVFNHLLTAGADPLIARLCASRGVQSPAELDD
                     KLAALLPYQTLTNCEAAAGRLADAVGRKEKILIVADYDADGATACAVGLDGLAAMGAK
                     VDFLVPNRFEHGYGLTPELAEIAAAQGVDLLITVDNGIASIAGVARAQALGLDVIVTD
                     HHLPADTVPDCIIVNPNQKGCGFQSKSLAGVGVIFYVLTALRAELRRRNYFSDGLKEP
                     NLGDLLDLVALGTVADVVPLDHNNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKA
                     QPFDMGFALGPRINAAGRLDDMSVGIACLLARDDSEAQELAAQLNNLNIERREIEQSM
                     LQDALNAFPETLPSGQTTLVAYRDDFHQGVVGIVASRLKDRFYRPTIVFAPADNGEVR
                     GSGRSIPNLHLRDALDLVSKRHPDLILKFGGHAMAAGLSILEHNIPAFQTTFEEAVRE
                     MVCEDDLSQTFITDGSLPACDITLEQAQNLARHVWGQGFAPPSFTDEFHVVRQQPLGA
                     EGKHKKVWLQKDGCEFEAMFWRCSEDIPEYIRTVYRPVANEWRNNLELQLYIDYWEAV
                     "
     gene            complement(5079..5813)
                     /locus_tag="WHR07_000535"
     CDS             complement(5079..5813)
                     /locus_tag="WHR07_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129784.1"
                     /translation="MLFRKTTAAVLAATLMLNGCTLMLWGMNNPVSETITRKHVDKDQ
                     IRAFGVVAEDNAQLEKGSLVMMGGKYWFVVNPEDSAKLTGILKAGLDKPFQIVEDTPS
                     YARHQALPVKLESPGSQNFSTDGLCLRYDTDRPDDIAKLKQLEFEAVELDKQTIYTRC
                     VSAKGKYYATPQKLNADYHFEQSVPADIYYTVTEKHTDKSKLFANILYTPPLFDTGCG
                     GRGTGFACGGSGCGRGCRPQMNSNAV"
     gene            complement(5860..6366)
                     /locus_tag="WHR07_000536"
     CDS             complement(5860..6366)
                     /locus_tag="WHR07_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein"
                     /protein_id="HEZ2129785.1"
                     /translation="MFEQEDEWVSKTQMKKQMNGLQDLGMELTKLSSDTLKKIGLDED
                     LYEAVVTYKKITSNGALKRQAQFIGRLMRDTDPAPIEAFLAKLRGDDAAHNAFLQRVE
                     RTRMELLADDGALTQFMSDFPHADAGKLRTLIRNTKKEQEQNKPPKNFRALFQELKTV
                     MENGDAEI"
     gene            6521..7852
                     /gene="pmbA"
                     /locus_tag="WHR07_000537"
     CDS             6521..7852
                     /gene="pmbA"
                     /locus_tag="WHR07_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HEZ2129786.1"
                     /translation="MLFNHTASELLDLCRRTLDLAKAAGATAAEADFSESIGQSVSVR
                     LGEIEQIEFQQDKSLDITVYVGKRKGRAGTADFSEQALRDTVRAAADIARHTAEDGCA
                     GLADPELMAQHIGDPDLYHEWDLDTEAAVGFAKQCEQAALNEDERIENSEGAAVQTGH
                     YQYVYGNTHGFAAHRQGTHHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQT
                     AARRTLRRLGSRSIPTGSYPVLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKK
                     VLPDFLNLREEPHIPRSFRSSYFDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQT
                     TGNAGGAHNLYLNHTHETQSDLLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVEN
                     GVIAYPVHEITVAGRLQDMYRDIVGVADDALRRSSNKIGSILIAGMTVAGS"
     gene            complement(8149..8352)
                     /locus_tag="WHR07_000538"
     CDS             complement(8149..8352)
                     /locus_tag="WHR07_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEZ2129787.1"
                     /translation="MATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMEGFKTLKE
                     GQRVSFDVTTGPKGKQAANIQAA"
     gene            8595..8897
                     /gene="clpS"
                     /locus_tag="WHR07_000539"
     CDS             8595..8897
                     /gene="clpS"
                     /locus_tag="WHR07_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HEZ2129788.1"
                     /translation="MTAQHQSDTLLHRLNTLPPKRYGVFLLNDDYTTMEFVVEILTEI
                     FMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEEI"
     gene            8899..11196
                     /gene="clpA"
                     /locus_tag="WHR07_000540"
     CDS             8899..11196
                     /gene="clpA"
                     /locus_tag="WHR07_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HEZ2129789.1"
                     /translation="MLAPELEQILQQLYREARKAHYEFISLEHLLLVLIEEDASVPNV
                     LKLCGADLKVVSEQLAASVAENTPLIPEHLLDTVETRPTLGFQRVMQRAMVHTQSAGK
                     AAVEPLDVLVALMSETDSHTVYFLKLQSVTRFEVLRCIAHGSPDEDEDEDDGNYSSDG
                     MDDDNENRAKPGKNPLSAYTVNLNAEVKAGRIDPLIGRKHEMERLVQILCRRRKNNPL
                     LVGEAGVGKTALAEGLAHQIVNGGIPDALKDAEVYALDMGSLLAGTKYRGDFEARVKS
                     VLKQLEKIPHAILFIDEIHTIIGAGSTSGGTMDASNLLKPALAKGSLRCIGATTYDEY
                     RTIFDKDHALSRRFQKIDVVEPTVSETVQILRGLKPMFEAFHQVRYTQGALEAAAELS
                     ARYINERFLPDKAIDVMDEAGAAQRILPKSKQKKVIGKAQIETVIAKVSRIPEKTVSH
                     DDKQVLQFLGRDLKNMVYGQENAIDALVAAVKMSRSGLALPDKPIGSFLFSGPTGVGK
                     TEAAKQLAYSLGVPLQRFDMSEYMERHAVSRLIGAPPGYVGFEQGGLLTEAVNKQPHC
                     VLLLDEIEKAHPDIFNVLLQVMDAGKLTDNNGKSADFRNVILIMTTNAGAESLSRPSL
                     GFTAKRERGDEMQAINKLFTPEFRNRLDAIIPFAPLSEPIIVKVVDKFLLQLEHQLLD
                     KKVEAEFTSALHKYLAEKGFDPQMGARPMHRLIQEKIRKPLADELLFGKLSDGGFVRI
                     DWDAAKEEAVLKFKKSKVKIKTASA"
     gene            complement(11260..12264)
                     /gene="rfaD"
                     /locus_tag="WHR07_000541"
     CDS             complement(11260..12264)
                     /gene="rfaD"
                     /locus_tag="WHR07_000541"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HEZ2129790.1"
                     /translation="MTIIVTGAAGFIGSNIVKALNQRGITDIVAVDNLSKGEKFKNLA
                     ECEIAHYLDKHEFIRQVREHILPYQNIEAVFHQGACSDTMNHDGLYMMENNYQYTLDL
                     LNWCQDERIPFLYASSAAVYGKGEIFREERELEKPLNVYGYSKFLFDQVLRRRMKEGL
                     TAQVVGFRYFNVYGQHEQHKGRMASVTFHHFHQYREHGYVNLFGSNDGYGNGEQTRDF
                     VSVEDVAKVNLYFFDHPELSGIYNLGTGRSQQFNELAAATVNACRAAEGKPEMSLKEL
                     VEEELIRYIPFPDALKGKYQSFTQADITKLREAGYKEEFFDVKSGVDRYVKWMLENLA
                     "
     gene            complement(12305..13423)
                     /locus_tag="WHR07_000542"
     CDS             complement(12305..13423)
                     /locus_tag="WHR07_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEZ2129791.1"
                     /translation="MPDFQRITIENIEYFIVDSIQNLRAEDSFIHRNNKLSVFGGNGE
                     ARKYVGSYIDDSGRKLSTFFEYENWGITETKNGRRVEYPLIQKNCFFNKKNLQRYLVD
                     AKVEYHKQEQKYHHDISRFYDDYVLSINNLPTENIFFSIHDVSDHLENSKGYRRGYIR
                     SEDDIWSIWRKIVLPKISYLSILKLLPVKDIEDSEPLFYFRIFLDYQFRSIVHPQLLS
                     REKLEIPASEFNQFVEQEIIKQKSRKGQQKYRKDVINHMPQCPFTLITDEVLLRASHI
                     KPYMVCITEKNEKEALDYLNGLALTPTYDWLFDQGYITFLDDGRLICGTRLSRYTWEK
                     LNINPNAKNKMRIYPEGREKYLEYHRKFVFQDNIDDFL"
     gene            complement(13425..14660)
                     /gene="dcm"
                     /locus_tag="WHR07_000543"
     CDS             complement(13425..14660)
                     /gene="dcm"
                     /locus_tag="WHR07_000543"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ2129792.1"
                     /translation="MTISTMAQTHDTRLQKTLLFPSQQGWKSKTFLKPDSHIRLATVF
                     SGIGAVEQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHNDITQFDARKFRN
                     QVDILVGGSPCQAFSMVGKRAGLEDTRGTLFYEFSRVVDEVQPKIFIYENVKGLLNHD
                     NGKTWKVVKSVFYSLGYDLYFQIMNSKDYGIPQHRERIFVVGFHTPPINGFQFPEKIE
                     LEHTMQDFLEDYTDSKYFLREKGVKFVTSSKNRQKRYTQINGEIALCQKANQQFNWHG
                     DFIFQAARESEFDDFIFDVNNVEEKYYLSEKIKNYVLAGGTKNFKTSTETDLPVARPL
                     LQTMHKMHRAGVDNYVTHNRGRIRKLTPRECLRLMGFRDDFKILVSDTQMYRQAGNSI
                     VVDVLIAILKQMDITLYGE"
     gene            complement(14697..15668)
                     /gene="hldA"
                     /locus_tag="WHR07_000544"
     CDS             complement(14697..15668)
                     /gene="hldA"
                     /locus_tag="WHR07_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose synthase"
                     /protein_id="HEZ2129793.1"
                     /translation="MSAKFQQETLKSRFAQAKVLVVGDVMLDRYWFGDVSRISPEAPV
                     PVAKIGRIDQRAGGAANVARNIASLGGRAGLLSVTGNDEAADALDALMVQDGVASYLM
                     RDKQIATTVKLRVVARNQQLIRLDFEEHPNCEVLEQIKQKYREILPEYDAIIFSDYGK
                     GGLSHISDMIDWAKHAGKTVLIDPKGDDYEKYVGATLITPNRAELKEVVGSWKNESEL
                     TEKAQNLRRHLDLTAVLLTRSEEGMTLFSEGEPIYQPTRAQEVYDVSGAGDTVIAGMG
                     LGLAAGCTMPEAMYLANTAAGVVVAKLGTAVCSFAELIKALSGQSTM"
     gene            complement(15723..16463)
                     /gene="pyrF"
                     /locus_tag="WHR07_000545"
     CDS             complement(15723..16463)
                     /gene="pyrF"
                     /locus_tag="WHR07_000545"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003756133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEZ2129794.1"
                     /translation="MNPLISDFQTPQQRTPVIVALDFSNEKDTLGFVRNLDPTLCQIK
                     IGKELFTATGRNLAESLINQGFKLFLDLKYHDIPHTVAQACKVAADMGVWMVDMHASG
                     GRRMMEAAAEAVAGYGTKPLLIGVTVLTSMEQSDLAEIGLNTAPEEQVIRLAKLAQSS
                     GLDGVVCSAQEAAPLRRELGQDFVLVTPGIRLDVAGNNDDQRRIMTPAEALAAGSTYL
                     VMGRPVTQAADPVAVLREVNRVANLEAN"
     gene            complement(16989..17636)
                     /gene="adk"
                     /locus_tag="WHR07_000546"
     CDS             complement(16989..17636)
                     /gene="adk"
                     /locus_tag="WHR07_000546"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HEZ2129795.1"
                     /translation="MKALLLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTP
                     LGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEAGVD
                     LDAVVEIDVPDSVIVDRMSGRRVHLASGRTYHVTYNPPKVEGKDDVTGEDLIQRDDDK
                     EETVKKRLAVYHEQTEVLVDFYSKLEGEHAPKYIKVDGTQPVEAVKAEVLGALGK"
     gene            17851..18690
                     /gene="htpX"
                     /locus_tag="WHR07_000547"
     CDS             17851..18690
                     /gene="htpX"
                     /locus_tag="WHR07_000547"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HEZ2129796.1"
                     /translation="MKRIFLFLATNIAVLVVINIVLAVLGINSRGGTGSLLAYSAVVG
                     FTGSIISLLMSKFIAKQSVGAEVIDTPRTEEEAWLLNTVEAQARQWNLKTPEVAIYHS
                     PEPNAFATGASRNSSLIAVSTGLLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGVV
                     NTFVVFLSRIIANLIARNNDGSQSQGTYFLVSMVFQILFGFLASLIVMWFSRQREYRA
                     DAGAAKLVGAPKMISALQRLKGNPVDLPEEMNAMGIAGDTRDSLLSTHPSLDNRIARL
                     KSL"
BASE COUNT         4601 a         5114 c         4523 g         4607 t
ORIGIN      
        1 taatccacta tagattaaaa tcacacaata tccaactatt cggaccttca tatgacacat
       61 accgtccacc tgcatttaga agaaaccgac aacttggcgt tgcagcgtct gtgcggttct
      121 tttgacaaca accttgattt acttgctaaa gcactcgata tccacatcag ccgccgtttt
      181 gaacatttca ctttcaacgg cgcatttgca cacgccggca aacgcgcact gctcaaactc
      241 ttggaaacgg cgcagacgcg cgacctaaac gacggcgaca tcaggcttgc cgccgtcgaa
      301 gcccaaaccg aagatgccgg tcatcaagaa aaaaaccatg accacgccta ttatttccgc
      361 accaagcgcg gcagcatcgg cggcagaacg ccacggcaga acggctatat ccgcgcccta
      421 ctcaaccacg acatcgtatt cggtctcggg ccggcaggta cgggcaaaac ctatcttgcc
      481 gtcgccgccg ccgtcgatgc gatggaaaaa caccaagtcg aacgcatcat tttagtgcgg
      541 cctgccgtcg aagccggcga gaaactgggc tttctgcccg gagacctgac ccaaaaagtc
      601 gacccctacc tccgtccgct ttatgacgcg ctttacgacc tgatgggctt cgaccgcgtc
      661 agcaaactga ttgaaaaagg cctgattgaa atcgccccgc tcgcctatat gcgcggcagg
      721 acgctcaacg gcgcatacat catcctcgac gaagcgcaaa acaccacgcc cgaacaaatg
      781 aaaatgttcc tgacccgcat cggcttcggc gcgaaagccg tcattaccgg cgacaccagc
      841 caaatcgacc tgcccaaaaa catcaaatcg ggattaaaag atgcgcgtga gaaactgcac
      901 aacgtggaag ggctgtattt ccacaccttt accggcgaag acgttgtccg gcatcctctg
      961 gtgcaaaaaa tcgtcgaagc ctacgaatcg gcagaacacg actgacattc caatgccgtc
     1021 tgaaacccga tgcatggaaa tcgggcagag aaaaacggat acggaaacca agctccgtat
     1081 ccgtttcttt atccgtccaa ccgatacatc aatcgaattt tctgcatcgg attgcctcat
     1141 cttcgcaaaa cattgccgaa gtttcgcggt tgcacgcctg acgcactttc tgccgcgcca
     1201 cgccttcatt ccgatcgctt gcctcaaacg tcttctgaaa aggcgtaacg ctgcatacat
     1261 acatggtgga atttgaaccg aaaaggtcga ttttgacggt attgctgccg ctttccaata
     1321 cggcgacacg gtgttccaac tgcgccagac gtgcttccaa atcgccgatt ctgtcggcaa
     1381 atgcaggcat ggcggcacac gcggtcaaaa tgcccaaaat acattttttc atcaattttt
     1441 ccttgtttct tgaaccctac ccacccggac atcctttttc cgagaggcag ggtcagactt
     1501 tatttacggg gatgaatccc cttacaaatc aggataatac atagaacggc actttatgct
     1561 tcatcccatg tgttgaaact tcattgctcc ttgtctgttg acccttattc ccaatccgtt
     1621 ccctcaacct tcggcttggg tttgcgcctg cgacggcggc gttttttcgc ctgtccttcg
     1681 tttttttcgt gccgggcagc agcctcgttt ttggtcattt ccgtccgttg ttcctgcgat
     1741 gccgtctgaa acgccgtcca ccactcggca agggcgcggt ccgcattgcc ggtttcggcg
     1801 cgcaagagca ggaaatcata ggcggcacgg aaacgcgcct gtgcaaacag tttatgcgga
     1861 cgtgcgcctt tgcggttctc aaactgcggc tgaaacatcc aaatttcgcg catcgtggcg
     1921 gaaaagcgtt gcggcacgcc ccaaccgcgt tcgacggttt cacgcatcgt attgattgca
     1981 tcggacaggg cgggcgcagg tttcaaaccc tgttgcagat tgcttttcca atggcgttcc
     2041 aactcgggcc acatcagagc cgccagtaca aaaccgaccg aaaccgattt gtcagcacgc
     2101 agccgctcat cggtattttt cagggcaagc accgtcattt ttccggcgat gccgtctgaa
     2161 acgcgcaagg cattgagcag cggatggatg tcgtccggta tgtcaaatcc gttcaaacgt
     2221 ttcagacact cgcgcgcgtg ccctgaaaac agcagtttca tgatttcgtc aaacagcctc
     2281 gctaccggtt cgtgcttcag acggcatatc gattcggcaa tcggtgcggt ggtttcttcc
     2341 gacagctcaa agcccaattt gcccgacagg cggatggcgc gcaaaatcct gacagggtct
     2401 tcctgatagc gttcggcggc atcgccaatc ataaccagcc tgcgggcggc aacatcggca
     2461 atcccgttgt ggaaatccaa aatctcttct ttttcaggat cgtaatacaa ggcattgcag
     2521 gtaaaatcgc gccgcatcgc atcttcttcg atgctgccgt aggtgttgtc tttcatgatt
     2581 ctgccgtgcg cgttctgatg aaccttcgca ccgccgcgaa acgtcgttac ttcgataatc
     2641 tccgcaccgt tcatcacatg gacgatttga aaacgcctgc cgatgatgcg gctgcggcgg
     2701 aagagtttgt gcacctgttc gggcgtggca tcggttgcga catcgaaatc tttgggttcg
     2761 atgccgagca gcagatccct gaccgcgccg ccgaccacat aagcctgaaa ccccgcccct
     2821 ttcagacggc gtatgacgtt ttcggcggca aagctcaaca tttcggcacg gatgttgtgt
     2881 ctttcggcag gaatgaccgt tttactttcc gcttttttac tgctccgacc ggaaggcagc
     2941 atcttattca accatttttt cagcataaat attctaaccc gaagagcggc atctccacgg
     3001 gcaaccgtgt tcagacggca tcaggcggta cgattccgca agatgccgta accataaaca
     3061 aaaggcgtag aaactacgcc gtccgaatca cgccgccctc gcggcggcgg caacgcgcca
     3121 ttataacaga ttgcccttta aaaaaatcag accctgcttt tgtggcggag tctgaaattt
     3181 gatgcacctt atatattgcg tccctaagaa gggatgatta acaaaaatta acgcccttta
     3241 ctttcttttc cgattgggaa cattcccgtc gtacaaacag gcaaatgaag gaacagaaat
     3301 cacattcaaa cggcgttccg ccgcctctac accgcttccc agtaatcgat atacagctgc
     3361 aattcgagat tgttgcgcca ttcgttggca acggggcggt aaaccgtgcg gatgtattcg
     3421 gggatgtctt cgctgcaacg ccaaaacatc gcttcaaatt cgcagccgtc tttttgcagc
     3481 cagacttttt tgtgtttgcc ctccgcgccc aaaggttgct ggcggacgac gtggaactcg
     3541 tcggtaaagc tcggcggcgc gaagccctgc ccccaaacgt gacgggcaag gttttgcgcc
     3601 tgttccaacg tgatgtcgca ggcgggcagg ctgccgtcgg tgatgaaggt ttgcgacaaa
     3661 tcgtcttcgc acaccatttc gcgcacggct tcttcaaagg tcgtctgaaa cgcgggaatg
     3721 ttgtgttcaa gtatgctcaa acccgccgcc atcgcgtgtc cgccgaattt taaaatcaaa
     3781 tcgggatggc gtttggacac caagtccaaa gcatcgcgca ggtgcaggtt gggaatggaa
     3841 cgccccgaac cgcgcacttc gccgttgtcg gcaggcgcaa acacgatggt cggacgataa
     3901 aaacggtctt tgaggcggct ggcgacgata ccgaccacgc cttgatggaa gtcgtcgcga
     3961 tacgccacca aagtcgtctg acctgaaggc agggtttcag gaaaggcgtt cagcgcgtct
     4021 tgcagcatag actgctcgat ttcgcgacgc tcgatattga ggttgtttaa ctgagccgcc
     4081 agttcctgag cttcggaatc atctcgcgcc aacaggcagg cgatgccgac cgacatatcg
     4141 tccagccgtc cggcggcatt gatgcgcggg cccaacgcaa aacccatatc aaacggctgc
     4201 gccttgcgcc agtcgcgccg cgccacttca aacaaggcgc ggatgccggg gcgcattttg
     4261 cccgaacgca tccgtttcaa accttgcgac acgaggatgc ggttgttgtg gtcgagaggg
     4321 acgacatcgg caaccgtgcc gagtgcgacc aaatccaaaa gatcgcccag attcggctct
     4381 ttcaggccgt ctgaaaaata attgcggcgg cgcagttcgg cacgcaacgc cgtcaacaca
     4441 taaaaaatca cgcccacgcc cgccaagctt ttgctttgga aaccgcagcc tttttggttc
     4501 ggattgacga tgatgcagtc gggcacggta tcggcaggca gatggtggtc ggttacaatc
     4561 acatccaaac ccagagcctg cgccctcgcc acgcctgcga tgctggcgat accgttatcc
     4621 accgtaatca gcaaatccac gccctgcgcg gcagcgattt cggcaagttc gggcgttaag
     4681 ccgtagccgt gttcaaagcg gttgggcaca aggaaatcca cttttgcccc catcgccgcc
     4741 aaaccgtcca aaccgacggc acacgccgtc gcgccgtcgg catcgtagtc ggcgacaatc
     4801 aggatttttt ccttgcgccc aaccgcatcc gccaaacgtc cggcggcggc ttcgcagttt
     4861 gtcagcgttt gatacggcaa aagcgcagca agcttgtcgt ccaattcggc aggactttgc
     4921 acaccgcgcg aagcacaaag ccgggcgatt aaaggatcgg caccggcggt gagcaaatga
     4981 ttaaaaacgt cggtattgat ggatcgggtt tggattttga ctgacataac gtggggtttt
     5041 actgtgcgtg tgtgcttaaa atgccgtctg aaagcttttc agacggcatt gctgttcatt
     5101 tgcgggcggc atccacgacc gcacccagag ccgccgcagg caaagccagt accgcgcccg
     5161 ccgcatccag tatcaaaaag ggggggcgta tataagatat ttgcaaacag cttggatttg
     5221 tcggtatgtt tttcagtaac cgtgtaataa atatcggcag gcacactttg ctcaaaatga
     5281 taatcggcgt tcagtttttg cggcgtggcg tagtatttgc ctttggcaga gacgcagcgc
     5341 gtgtaaatag tctgtttgtc gagttcgacc gcttcaaact caagctgttt cagcttggcg
     5401 atgtcgtcag gcctgtcggt atcgtagcgc aggcaaaggc cgtcggtact gaaattctgg
     5461 ctgccgggcg attcgagttt gaccggcagg gcttggtggc gggcatagct cggggtatcc
     5521 tcaactattt ggaagggctt gtccagcccg gccttcaaaa tgcccgtcag cttcgccgaa
     5581 tcttcaggat tgacgacgaa ccagtatttt ccgcccatca tcaccaggct gcccttttcc
     5641 aattgggcat tgtcttcggc aaccacaccg aaggcgcgga tttggtcttt gtcaacgtgt
     5701 ttgcgggtga ttgtttcgct gaccgggttg ttcattcccc acaacatcaa cgtacagccg
     5761 ttcagcatca aggttgccgc caaaacggcg gcggtcgttt tacggaacaa cattttatcc
     5821 tccaatctaa ataacggcgg atgtcgtctg aaaatatgcc taaatttccg cgtccccgtt
     5881 ttccatcacg gttttcaact cttgaaacag ggcgcggaaa ttttttggtg gtttgttttg
     5941 ctcctgctct tttttggtat tgcggatgag tgtcctcagc ttgcccgcgt ccgcatgcgg
     6001 aaaatccgac ataaactgcg tcaacgcgcc gtcgtctgcc agcagctcca tccgcgtccg
     6061 ctccacacgt tgcaaaaagg cgttgtgcgc cgcatcgtcg ccgcgcagct tggcaagaaa
     6121 tgcctcgatg ggcgcgggat cggtatcgcg catcagtctg ccgataaatt gcgcctgccg
     6181 cttgagcgcg ccgttggatg tgattttttt ataggtaacg acggcttcgt acaaatcttc
     6241 gtccaagccg atttttttca acgtgtcgct tgagagcttg gtcagctcca tacccaaatc
     6301 ctgcaaaccg ttcatctgct ttttcatttg ggttttgctg acccattcgt cttcttgttc
     6361 aaacatcttc attctcaaat tttatccgac gggcgcattt taacagaatg attccgcgtt
     6421 cagacggcat tttgcaccgt ccgccctgca aacggcacgc ttttgcccct gccgcccgaa
     6481 acggttaaaa tgccgcaacg ctccaccaag aaagatttct atgctgttca accacaccgc
     6541 ttccgaactt ctcgacctct gccgccgcac gctcgacttg gcaaaagcag cgggcgcgac
     6601 cgccgccgaa gccgatttca gcgaatccat cggacaaagc gtcagcgtgc ggctgggcga
     6661 aatcgaacaa atcgagttcc agcaggacaa gtcgctggac attaccgttt acgtcggcaa
     6721 acgcaaaggc cgcgctggca ccgccgattt ctccgaacaa gccctgcgcg acaccgtccg
     6781 cgccgccgcc gacatcgccc gccacaccgc cgaagacggt tgcgccggac ttgccgaccc
     6841 cgagttgatg gcgcaacaca tcggcgaccc cgacctttac cacgaatggg atttggatac
     6901 ggaagccgcc gtcggctttg caaaacaatg cgaacaagcc gccctgaacg aggatgagcg
     6961 catcgaaaac tccgaaggcg cggcggtgca aaccggccat taccaatacg tttacggcaa
     7021 cacccacggt tttgccgcac accggcaagg cacgcaccac agcatttcct gcagcgtcgt
     7081 tgccgccgac gaaaacggga tgcagcgcga ctactggtac gattccgcct gccgccatcc
     7141 ggatatggac agccccgaaa ccatcggtca aaccgccgcc cgccgcactt tgcgccgact
     7201 cggcagccgc agcatcccga caggcagcta ccccgtcctc ttcgatacca ccgtttcggg
     7261 cggccttatc ggacacctcg tcggcgcact ctccggcggc gcgctctacc gccaaagcag
     7321 tttcctgatc gacagcatcg gcaaaaaagt cctgcccgat ttcctcaacc tgcgcgaaga
     7381 accgcacatc ccccgctctt tccgcagcag ctattttgat gcggaaggcg ttgccaccgc
     7441 accgcgcttc gtgattcaaa acggcattgt cgaaggctat ttcctcagca gttacagcgc
     7501 gcgcaaactc ggtatgcaga ccacgggcaa cgccggcggc gcgcacaacc tgtatttgaa
     7561 ccatacgcac gaaacgcaat ccgacctgct gaaagaaatg gggacgggat tattggttac
     7621 cgaactgatg ggacagggcg cgaacaccat taccggtgac tactcgcgcg gcgcggcggg
     7681 tttttgggtg gaaaacggcg tgattgccta ccccgtccac gagattaccg tagccggacg
     7741 cttgcaggat atgtaccgcg acattgtcgg cgtggcggat gacgctttgc ggcgttcgtc
     7801 caacaaaatc ggctcgattc tgattgcggg gatgacggtt gccggaagct gaacgccctg
     7861 ccgatgccgt ctgaagacga aggcagcacg ttttgccccg tgcctgcccg tttgccgttt
     7921 tatgccgcac cgccttttgc cgacaacatt gcacattttt tcatcagcac tgattttccc
     7981 ttatccgtca aaatactaag ccacttgtcc acaacagggt acacacaagt tcaggataag
     8041 gcgtgcgggg attggggttt ttccgccgcc ggcaaaacgg cagacaaaaa cggcgggaca
     8101 ttgcctgtcc cgccgttttc aaatatacat ttgaccgtac atcaggaatt aagcagcctg
     8161 aatgttggcg gcctgtttgc ctttagggcc ggtggttacg tcgaaagaga cgcgttggcc
     8221 ttctttcagg gttttgaaac cttccatatt gattgctgag aagtgagcga acaaatcttc
     8281 gccgccttca tcaggcgtga tgaaaccaaa acctttagcg tcgttaaacc attttacgat
     8341 accggttgcc attagaaact tcctatactc aaaaattaac aaaatcagca aaacaaggca
     8401 tacggcaaac cgagccgtct ggcgttcctt ccagcttgat atactcggcg gatgcccaat
     8461 cctgcttaac cgtcttttta catttgttaa gacaaaacgt caagctatgt tttcaaaaaa
     8521 gtgggaaaat aggcaaaagt accgaaaata caacaaaaat gccgtctgaa cgcggctttc
     8581 aaatgggaca cactatgacc gcgcaacacc aatccgacac gctcttgcac cgtctgaaca
     8641 ccctgccgcc gaaacgttac ggcgttttcc tattgaacga cgattacacc acgatggaat
     8701 ttgtcgtcga aatcctgacc gaaatcttta tgctcggaca agaacaggcg gtagcggtaa
     8761 tgctcttggt tcatcacgaa ggcaaaggcc tgtgcggcac ttacacgcgc gatattgccc
     8821 aaaccaaaca acaacaagtc atgcagcggg caaaagccga agggcatccg ctgcaatgta
     8881 ttgtcgagga gatttaatat gcttgcaccc gaattggaac agattttgca gcagctttac
     8941 cgcgaggcgc gtaaggctca ttatgaattt atcagcctcg agcatctgct tttggtactc
     9001 atcgaagaag atgcctccgt gccgaacgtc ttaaaactat gcggcgcgga tttgaaagtg
     9061 gtgtccgaac agctcgccgc cagcgttgcc gaaaacaccc ccctgattcc cgaacacctt
     9121 ttagacacgg tcgaaacacg gcccacgctc ggcttccaac gcgtgatgca acgggcgatg
     9181 gtgcataccc agtctgccgg aaaagccgca gtcgaaccgt tggacgtttt ggtcgcgctg
     9241 atgagcgaaa ccgacagcca caccgtctat ttcctcaagc tgcaatcggt tacgcgtttt
     9301 gaagttttgc gctgtattgc ccacggctct cccgatgaag atgaagatga agacgatggc
     9361 aactattctt cagacggcat ggacgacgat aatgaaaacc gcgccaaacc gggcaaaaac
     9421 cctttatcgg cgtacaccgt caacctcaac gccgaagtca aagccggccg tatcgaccct
     9481 ttgattggtc gcaaacacga aatggaacgg ctggtgcaaa tcctatgccg ccgccgcaaa
     9541 aacaatccgc ttttggtcgg cgaagcgggc gtgggcaaaa ccgcgctggc ggaaggtttg
     9601 gcacatcaaa tcgtcaacgg cggcattcca gacgcgctca aagatgccga agtgtacgcg
     9661 ctggatatgg gctcgctgtt ggcgggcacg aaataccgcg gcgactttga agcgcgggtc
     9721 aaatccgtct tgaaacagct cgaaaaaatc ccgcacgcca ttttgtttat cgacgaaatc
     9781 cacaccatca tcggcgcggg cagcaccagc ggcggcacca tggacgcgtc caacctgctc
     9841 aaacccgcgc tggcaaaagg ttcgctgcgc tgcatcggcg cgaccaccta cgacgaatac
     9901 cgcaccattt tcgacaaaga ccatgcctta agccgccgct tccaaaaaat cgacgtggtc
     9961 gaacccaccg tttccgaaac cgttcaaatc ctgcgcggct tgaaaccgat gtttgaagcc
    10021 ttccaccaag tccgctacac tcaaggcgca ctcgaagccg ccgccgaact ctccgcacgc
    10081 tacatcaacg agcgtttcct gcccgacaaa gccatcgacg taatggatga agcaggcgcg
    10141 gcgcaacgga ttctgcccaa atccaaacag aaaaaagtca tcggcaaagc acaaatcgaa
    10201 accgtcatcg ccaaagtttc gcggattccc gaaaaaaccg tgtcgcacga cgacaaacaa
    10261 gtgctgcaat tcctcggtcg cgatttgaaa aacatggttt acggtcaaga aaacgccatc
    10321 gacgcgctgg ttgccgccgt caaaatgtcg cgttccggcc ttgccctgcc cgacaaaccg
    10381 ataggcagct tcctcttctc cggcccgacc ggcgtgggca aaaccgaagc cgccaaacag
    10441 cttgcctact cgctgggcgt accgctgcaa cgctttgata tgtccgaata catggaacgc
    10501 catgccgtat cgcgcctcat cggcgcgcca ccgggctacg tcggctttga acaaggcggc
    10561 cttttgaccg aagccgtcaa caaacagccg cattgcgtat tgctcttgga cgaaatcgaa
    10621 aaagcccacc ccgacatttt caacgtcctc ctgcaagtca tggacgcagg caaactgacc
    10681 gacaacaacg gcaagagtgc cgatttccgc aacgtcatcc tgattatgac caccaacgca
    10741 ggcgcggaaa gcctcagccg ccccagcctc ggctttaccg ccaagcgcga acgcggcgac
    10801 gaaatgcagg caatcaacaa gctcttcacg cccgagttcc gcaaccgctt ggacgcgatt
    10861 atcccgtttg cacccttgtc cgaacccatc atcgtcaaag tcgtggacaa attcctgctc
    10921 cagctcgaac accagctcct cgacaaaaaa gtcgaagccg aattcacgtc ggcattgcac
    10981 aaatatctgg cggaaaaagg tttcgacccg caaatgggcg cgcgcccgat gcaccgcctg
    11041 attcaggaaa aaatccgcaa accgctcgcc gacgaactcc tgttcggcaa actatccgac
    11101 ggcggcttcg tgcggataga ctgggatgcg gcaaaagaag aagccgtgtt gaagtttaag
    11161 aaaagcaagg tcaaaataaa aaccgcctcc gcgtaaaatc aaaaatgccg tctgaaattt
    11221 cagacggcat tttctttcaa acaaaattac caatcgtgtt taagccaaat tttccagcat
    11281 ccatttgacg tagcggtcga cgcctgattt gacatcgaaa aattcttcct tatatccggc
    11341 ttcgcgcaat ttggtgatgt cggcttgggt gaagctctgg tatttgcctt tgagtgcgtc
    11401 ggggaagggg atgtagcgga taagttcttc ttccaccagc tctttcaagc tcatttcagg
    11461 cttgccttcg gcggcgcggc aggcgttgac ggtggcggcg gcgagttcgt taaactgttg
    11521 gctgcggccg gtaccgaggt tgtagatgcc ggaaagttcg ggatggtcga agaagtagag
    11581 gttgactttg gcaacgtctt cgacgctgac aaagtcgcgg gtttgttcgc cgttgccgta
    11641 accgtcattg ctgccgaaca ggttgacgta accgtgttcg cggtattggt ggaaatggtg
    11701 gaaggtgacg gatgccatgc ggcctttgtg ttgttcgtgt tgtccgtaaa cgttgaagta
    11761 gcggaagccg acgacttggg cggtgagacc ttctttcatg cggcggcgca atacttggtc
    11821 gaacaggaat ttggagtagc cgtacacatt aagcggtttt tcgagttcgc gctcttcgcg
    11881 gaagatttcg cctttgccgt aaaccgccgc actggaggca taaaggaagg gaatgcgttc
    11941 gtcctgacac cagttcaaca aatccagcgt gtactggtag ttgttttcca tcatatacaa
    12001 accgtcgtgg ttcatcgtat cggaacacgc gccttgatgg aaaacggctt cgatgttttg
    12061 ataaggtaaa atgtgttccc tcacttggcg gatgaattcg tgtttgtcga gataatgggc
    12121 gatttcgcac tcggcaaggt ttttgaattt ttcgcctttg ctcaaattat cgacggcgac
    12181 gatgtcggta ataccgcgtt gattaagtgc tttgacgatg ttgctgccga taaagccggc
    12241 cgcgcctgtt acgatgatgg tcatattcgg tttcctttgt tttgagtaaa attaataaac
    12301 ttagttacaa gaaatcatcg atattgtcct gaaacacaaa tttgcgatga tattccaaat
    12361 atttttctct tccttcggga tatattctca tcttattttt tgcatttgga ttgatattaa
    12421 gtttttccca tgtgtaacgg cttagtcgag taccgcaaat caaacgacca tcatccaaga
    12481 aagtaatata accttgatcg aacaaccaat cataagtcgg cgttaaagct aacccattta
    12541 aataatctaa tgcctctttc tcatttttct cagtaataca aaccatataa ggtttaatat
    12601 gactagccct taacaaaacc tcatctgtaa ttaatgtaaa tggacattgc ggcatatgat
    12661 ttataacatc cttgcgatat ttctgctgcc cttttctact tttctgttta atgatttctt
    12721 gctctacgaa ttgattaaat tctgaagccg gtatttctaa tttttctctt gataagagtt
    12781 gcgggtgcac gatagagcga aattgataat ccaaaaatat tcggaaataa aataatggtt
    12841 ctgaatcttc tatatctttg acaggcaata gtttaagaat tgataaataa ctaattttgg
    12901 gcaatacaat cttacgccaa attgaccata tatcatcctc cgaacggata taacccctac
    12961 ggtaaccttt agaattttcc aaatggtctg atacatcatg gattgaaaag aaaatatttt
    13021 ctgtaggcag attattaata cttaaaacgt aatcatcata aaaccttgaa atatcatgat
    13081 gatatttctg ttcttgtttg tgatattcaa cttttgcatc aaccaaataa cgctgtaaat
    13141 ttttcttatt aaaaaaacaa tttttctgaa tgagaggata ttctaccctc cttccatttt
    13201 ttgtctcagt aatcccccaa ttttcatact caaaaaatgt acttagtttt cgaccactat
    13261 catcaatata actacctaca tatttgcgtg cttccccatt accaccaaaa acagataact
    13321 tgttattcct gtgaataaaa ctatcttccg cacgtaaatt ttgaatacta tcgacaataa
    13381 aatactctat gttttcaata gtaattcttt gaaaatccgg cattttactc tccataaagc
    13441 gtaatatcca tttgttttaa tatagcgatt aatacatcaa caacaatact gtttcccgct
    13501 tggcgataca tttgagtatc actaactaaa attttaaaat catctctaaa acccattagc
    13561 cgcaaacatt ccctaggtgt taatttacga atacgtccac gattatgagt aacataatta
    13621 tcaaccccgg cacgatgcat tttatgcata gtttgcaata atgggcgagc tacaggcaaa
    13681 tcagtttccg tactggtttt aaaatttttt gttcctcctg ccaaaacata atttttgatt
    13741 ttttcagaaa gataatattt ttcctcaacg ttatttacat caaaaataaa gtcatcaaat
    13801 tcagattcgc gggctgcctg aaaaataaaa tcaccatgcc aattaaattg ttgatttgct
    13861 ttttggcata aggcaatttc tccattaatc tgtgtataac gtttttgtct atttttagaa
    13921 ctggtaacaa atttcacacc cttttcacgt aaaaaatatt tgctatcagt atagtcctcc
    13981 aaaaaatctt gcatagtatg ttctaattca atcttttcag gaaactgaaa accatttata
    14041 ggaggggtat gaaagccaac aacaaaaata cgctcacgat gttgaggaat cccataatcc
    14101 ttactattca ttatttggaa atataagtca taaccaagtg aataaaaaac actttttaca
    14161 actttccaag tttttccatt atcatgattg agcaagccct ttacattttc ataaataaat
    14221 atctttggtt ggacttcatc cacaacgcga gaaaattcat agaataatgt tcctcgtgta
    14281 tcttctaatc ctgcacgttt gccaaccatg gaaaatgctt ggcaaggact gcctccaact
    14341 aaaatatcaa cttgatttct aaactttctc gcatcaaatt gagtaatgtc gttatgccaa
    14401 aaatcttcat ttaatttata gtttccaaga taactttttt taacgtatgg atcaatatct
    14461 cctgcaaaaa caatggtatg gtttaaattt aatcggtgga atgcctgttc aaccgcacca
    14521 atcccgctga atacggttgc taatctaata tgtgaatcag gtttaagaaa agttttagat
    14581 ttccaacctt gttgactggg aaagagcaaa gttttttgta atcgagtatc gtgtgtctgt
    14641 gccattgtcg aaatagtcat acttatatcg ttctgtttat cttatcaata tgaaaactac
    14701 attgttgatt gccctgacaa tgccttgatc aattcggcaa acgagcaaac cgccgtaccg
    14761 agtttcgcca cgacaacccc ggccgcagta ttggcaaggt acatggcttc gggcatggtg
    14821 cagcctgccg ccaaacccaa gcccattccg gcaatgacgg tgtcgcccgc accggatacg
    14881 tcgtaaactt cttgggcgcg ggtgggctgg taaatcggtt cgccttcgct gaacaaggtc
    14941 atgccttctt cgcttcgggt cagtaaaacg gcggtcaggt cgaggtggcg gcgcaggttt
    15001 tgcgcttttt cggtcagctc gctttcgttt ttccaactgc cgaccacttc tttcaattcg
    15061 gcgcggttag gcgtaatcag agttgcaccg acatattttt cgtaatcgtc gcctttgggg
    15121 tcgattaaga cggttttgcc ggcgtgtttc gcccaatcga tcatatcgga gatatgcgac
    15181 aggccgcctt tgccgtagtc tgaaaaaatg attgcgtcgt attcgggcaa gatttcgcgg
    15241 tatttctgct tgatttgttc caacacttcg cagttgggat gttcttcaaa atcaagacgg
    15301 ataagctgct ggttgcgggc gacgacgcgc agtttgacgg tggtggcgat ttgtttgtcg
    15361 cgcatcagat aggaggcgac gccgtcctgc accatcagcg catcgagcgc gtcggcggct
    15421 tcgtcgttgc cggttacgga caacagccct gccctgccgc ccaacgaagc gatgttgcgc
    15481 gcgacatttg ccgctccgcc cgcgcgttgg tcgattcgtc cgattttcgc caccggcacg
    15541 ggggcttcgg gcgaaatacg ggacacatcg ccgaaccaat agcggtcgag catcacgtcg
    15601 ccgacaacca ggactttggc ttgcgcgaaa cgggatttga gggtttcttg ttggaacttg
    15661 gcggacatat tgcctccgtt gtattttttc agacggcctc agcctgtaag gccgtctgaa
    15721 aatcagtttg cttcaaggtt tgccacgcgg ttcacttcgc gcaatacggc taccggatcg
    15781 gcagcttggg ttacaggacg acccattacc aaataagtcg aaccggcagc caaggcttcg
    15841 gccggtgtca tgatgcggcg ctggtcatca ttattgccgg caacgtccaa gcggatgccg
    15901 ggcgtgacca agacaaaatc ctgtcccaat tcgcggcgca gcggcgcggc ttcttgggcg
    15961 gaacagacca cgccgtccaa gcccgaactt tgcgccagtt ttgccaagcg gatgacttgt
    16021 tcttcagggg cggtgttcaa accgatttcc gccaaatcgc tttgttccat gctggtcaac
    16081 acggttacgc cgattaagag cggcttcgtg ccgtatccgg caacggcttc tgctgcggct
    16141 tccatcatac ggcggccgcc cgatgcgtgc atatcgacca tccaaacgcc catatcggca
    16201 gcgactttgc aggcttgcgc gacggtgtgg ggaatatcgt ggtatttcaa atcgaggaaa
    16261 agtttgaaac cttgattgat taagctttct gccaaattgc gtcccgtcgc ggtaaacagc
    16321 tctttgccga ttttgatttg acacaatgtc gggtcaaggt tgcggacgaa tccgagcgtg
    16381 tctttttcgt tggaaaaatc aagggcgacg ataacggggg tgcgttgttg cggagtttgg
    16441 aagtcggaga ttaaaggatt catggtgttt tcgtttcggg ttttcagacg acctttatcg
    16501 tctttttcgc agtatagtgg attaacttta aaccggtacg gcgttgtctc gccttagttc
    16561 aaagagaacg cttctctaag gtgctgaagc acaaagtgaa tcggttccgt actatctgta
    16621 ctgcctgcgg cttcgtcgcc ttgtcctgat ttttgttaat ccactataac aacgtaaatt
    16681 caaaccgtag gtcgggcatt gatgtccgac ctacgcgaac tcaagcctcc gacaaactgt
    16741 ttcggataaa tttgaaccgg tacatcagcc gtcattcccg cgcaggcggg aatccattga
    16801 taaaactcag ttcatcagat ttaaacagcg attgcccaaa ttcagaaatg gattcccgcc
    16861 tgcgcgggaa tgacgccaaa tgattatttt tcggttgcaa cacgctgttt atcaaaaaca
    16921 ggtcgtctga aaacctgatt ttctgttttc agagtgcgaa gcctgcccgt gggtacgacc
    16981 ttttcgattt atttgcccaa tgcgcccaat acttcggctt tcacggcttc taccggctga
    17041 gtgccgtcaa ctttgatgta tttaggcgcg tgttcgcctt ccagtttgct gtaaaaatcg
    17101 accaaaactt cggtttgctc gtggtaaacg gcaaggcgtt ttttcacggt ttcttctttg
    17161 tcgtcgtcgc gctgaatcaa atcttcgccg gttacgtcgt ctttgccttc aactttgggc
    17221 gggttgtagg taacgtggta agtacggccg gaagccaaat gcacgcggcg gccgctcata
    17281 cggtcgacaa tcacgctgtc aggcacgtcg atttcaacga ctgcatccaa atccacgcct
    17341 gcttcaacca tcgcttcggc ttgtgccaat gtgcgcggga aaccgtcgaa caggaaaccg
    17401 tttttgcagt cgtcttgcgc gatgcgttct ttgaccatgc cgataatgat gtcgtcgcgc
    17461 accaagccgc cttcgtcaat gatttttttc gcttccaaac ccaagggcgt gccagcctta
    17521 atcgcggcgc ggagcatgtc gccggtagag atttgcggaa tgccgaacgc ggcggtgatg
    17581 aattgcgcct gagtgccttt gcccgcgccc ggcgcgccta aaagtaatgc tttcatgaag
    17641 tgatcctttg aaatgtgttt attggaatca aacagatggt ttacgattct acacggcttg
    17701 gcacaatagt tcaaaaacca actgcacaaa ctgccatttg caagcaaatg ttttgcatac
    17761 ctttgccgag tctgatattc acaagccggc aactttttgg gacaatcccc aaaatttcaa
    17821 aacatcacac cctaccaaaa aggaacatcc gtgaaacgaa tttttctgtt tttggctacc
    17881 aatatcgctg ttttggtcgt aatcaacatt gttttggcgg ttttgggcat caacagccgg
    17941 ggcggcacgg gcagcctgtt ggcgtattcc gccgtcgtcg gcttcactgg ttcgattatt
    18001 tcgctgctga tgtccaaatt catcgccaaa caatcggtcg gcgcggaagt tatcgacacg
    18061 ccgcgcaccg aagaagaagc ctggcttttg aacactgtcg aagcccaagc gcggcaatgg
    18121 aacctgaaaa cgcccgaagt cgccatctac cactcccccg aacccaatgc ctttgccacg
    18181 ggcgcatcga gaaacagctc cctgatcgcc gtcagcaccg gtttgctcga ccatatgacg
    18241 cgcgacgaag tggaagccgt attggcgcac gaaatggcac acgtcggcaa cggcgatatg
    18301 gttacgctga cgctgattca aggcgtggtc aataccttcg tcgtgttcct gtcgcgcatt
    18361 attgccaacc tgattgcccg aaacaacgac ggcagccagt cccagggaac ttatttcctg
    18421 gtcagcatgg tattccaaat cctattcggc ttccttgcca gcttaattgt catgtggttc
    18481 agccgacaac gcgaataccg cgccgacgcg ggcgcggcaa aactggtcgg cgcaccgaaa
    18541 atgatttccg ccctgcaaag gcttaaaggc aacccggtcg atttgcccga agaaatgaac
    18601 gcaatgggca tcgccggaga tacgcgcgac tccctgctca gcacccaccc ttcgctggac
    18661 aaccgaatcg cccgcctcaa atcgctctga gccgatttga aacaacaaaa aaaccgtacg
    18721 cgcaagcagt acggtttttt gtatatgctg tctgaaaaca tcaggtttcc ataccaacac
    18781 caaccgtatc catttccgca ccggatacgc cgcattgata taccctgata aaccgtgtcc
    18841 ggaca
//
LOCUS       DAWGKF010000022        18425 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.022, whole genome shotgun sequence.
ACCESSION   DAWGKF010000022 DAWGKF010000000
VERSION     DAWGKF010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18425)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18425)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18425
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.022"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            142..1539
                     /gene="aspA"
                     /locus_tag="WHR07_000548"
     CDS             142..1539
                     /gene="aspA"
                     /locus_tag="WHR07_000548"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HEZ2129797.1"
                     /translation="MTVRIEHDLLGDREIPAEVYWGIHTLRAIENFKISTQKISDVPQ
                     FVRSMVMVKKATAQANGELGAVKPEIAAAIEKACDEVLLNNRCLDQFPSDVYQGGAGT
                     SVNMNTNEVIANLALEVLGYEKGRYDIVNPMDHVNASQSTNDAYPTGFRLAVYYSIGE
                     LLDKLTVLKNAFAAKAEEFKDVLKMGRTQLQDAVPMTAGQEFQSFQVLLEEEILNLDR
                     TRQLLLEVNLGATAIGTGVNTPKGYAELVVKKLSEVSGLPCKLTENLIEATSDCGAYV
                     MVHGALKRTAVKLSKICNDLRLLSSGPRAGLKEINLPELQAGSSIMPAKVNPVIPEVV
                     NQVCFKVIGNDTTITFAAEAGQLQLNVMEPVIAQCMFETISLLGNAAVNLSDKCVKGI
                     TVNREICERYVFNSIGLVTYLNPYIGHHNGDLVGKICAQTGKGVREVVLERGLLSEEE
                     LNRILSPENLMNPHL"
     gene            complement(1611..2486)
                     /locus_tag="WHR07_000549"
     CDS             complement(1611..2486)
                     /locus_tag="WHR07_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ2129798.1"
                     /translation="MAYLLISIVFSVSVSILLKMARKKKIDIAQAVAVNYVVAVILTL
                     LVLKPDIGNIGAFLPTWPLFAALGVLLPSVFVIMGKSVEAAGIVKSDAAQRLSLFLPI
                     VAALTLFGEKLSEGKLIGLCLAFAALFCLLWKHSGGKKSGSAWRQAALLLGVWAGYGI
                     IDILFKQLAKSGTAFAGNLLVAFVLAGVLMFACLFAKSVRWRVESVVGGIFLGGLNFM
                     NIVTYITAHQMMKDNPTLVFAGMNIGVIVLGTLSGALFFKEKINTINTAGIVLALCSI
                     ACLFYWGEVKVLFGI"
     gene            complement(2488..3210)
                     /locus_tag="WHR07_000550"
     CDS             complement(2488..3210)
                     /locus_tag="WHR07_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HEZ2129799.1"
                     /translation="MDKDLYAVLGVSPQAGADEIKRAYRKLAMKYHPDRNPGNPQAEE
                     KFKEIQRAYDTLSDLSKRTQYDASFRGHEERGRQEEAFRREQARREQFYREQMRREQA
                     LRQAFERQASRSRHAYEPSGGGSGRNYVLAAYILFGLGAIMLFMPIVGVIFAYMPIVG
                     VILAYMKRNSLDSIVYAAHTEYLIKTFWRTFWLYILGALTALLGIGVLIIIATNVWYF
                     YRIIAGFIRFNGGRAVAPEKWI"
     gene            complement(3232..3711)
                     /gene="ybaK"
                     /locus_tag="WHR07_000551"
     CDS             complement(3232..3711)
                     /gene="ybaK"
                     /locus_tag="WHR07_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HEZ2129800.1"
                     /translation="MSKQTYPVTPAVRVLRENGIKFEPFIYPYEEHGGTAQFAHLFGK
                     DEHLVIKTIVLQDENGKGLIVLMHGDKQISTRNLARHLGAKHIEPATPAQANKWTGYL
                     VGGTTPFGIRTKLDIYVEQSVMDLETIYINGGKRGFIIGIRPGDLNILNPKTIQAAV"
     gene            3787..4149
                     /locus_tag="WHR07_000552"
     CDS             3787..4149
                     /locus_tag="WHR07_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEZ2129801.1"
                     /translation="MDIRYFGTTPRYSEAVGANGLIFLSGMVPENGETAAEQTADVLA
                     QIDRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAAGRTPARACVEARLARP
                     EWRVEIKITAVKKDAATE"
     gene            4184..5047
                     /locus_tag="WHR07_000553"
     CDS             4184..5047
                     /locus_tag="WHR07_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein YgfZ"
                     /protein_id="HEZ2129802.1"
                     /translation="MKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYN
                     TPKGRVIANMIVVNRGDDLLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAEL
                     AASAEPLAAQEPCLAFTAECGSDGICSVVLPHRGILHIAPETALPPYDAAAENAWRLH
                     EILSGYPWICAATKETAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAV
                     LSGNSAVEAGTLLTADGEETGIVLDSVKDSESFTALAVIKFSAAQKELTVPNGGIFKA
                     VHPFFKTENAE"
     gene            5145..6104
                     /gene="ttcA"
                     /locus_tag="WHR07_000554"
     CDS             5145..6104
                     /gene="ttcA"
                     /locus_tag="WHR07_000554"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HEZ2129803.1"
                     /translation="MSKKTKQELENNKLSKRLRHAVGDAINDFNMIEPDDKIMVCLSG
                     GKDSYALLDILRQLQASAPIDFELVAVNLDQKQPGFPEEVLPTYLESIGVPYKIVEED
                     TYSTVKRVLDEGKTTCSLCSRLRRGILYRTAKELGCTKIALGHHRDDILATMFLNMFY
                     GGKLKAMPPKLVSDNGEHIVIRPLAYVKEKDLIKYAELKQFPIIPCNLCGSQPNLQRQ
                     VIGDMLRDWDKRFPGRIESMFSALQNVVPSHLADTELFDFAGLERGQTLKHGGDLAFD
                     SEKMPERFSDGSEEDESEIKIAPQKAERKVINILANKPKTCGA"
     gene            complement(6198..9137)
                     /locus_tag="WHR07_000555"
     CDS             complement(6198..9137)
                     /locus_tag="WHR07_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III restriction-modification system
                     endonuclease"
                     /protein_id="HEZ2129804.1"
                     /translation="MSGFNYEKNQPHQMRAVSAVLGVFDGATPKYRTADENPELLFAA
                     KQYANNILKVQSQNGIDGRFPDRSDDQNILDISMETGTGKTYTYTQTMFELHRWLGVF
                     KFIVVVPTLSIKAGTQQFLQSKALAEHFEQDFGGDYEGVRLKTYVVESAKKNKGKKSN
                     APITIEQFVKAENKKEIHVLLINAGMVNSSSMNDTGDKALKDLFDNPVDALAAVRPFV
                     IVDEPHKFPTRESAKTWGNIKRLKPQYILRYGATFNDEYYNLLYRLTAVDAFNDGLVK
                     GVRVFQEEMQGGMDAAVKLVSSGGKEAKFELNEKDKKQTFKLAKGEDLAQIHPAISDL
                     KIDKMNKTVVVLSNGLELKTGAVINPYSYSQTVQDAMMQRAVAEHFKLERALLAERAP
                     QPKIKPLTLFFIDDIAGYRSGNELSGSLKDKFESWIRVEAARRLKTESDPFYRDYLQK
                     TLDDVSACHGGYFSKDNTDSDDRIEQEINEILHDKEKLLSLDNPRRFIFSKWTLREGW
                     DNPNVFQICKLRSSGSTTSKLQEVGRGLRLPVNELMARVRDVPYKLNYFVDSSEKDFV
                     KQLVGEINDNSFQEEISKKFTEELKQKILQKYPDIKPLVLVNQLFSDGIIDDNENFAE
                     DGYDKLKAAYPEAFPKGLDKGKVSNAKDEGKDTIIMREGKYEELKALWELIHHKAVLQ
                     YKIKDEAEFVDLFTAYLRENAAKFPQAGIRTAVNEAYINNGLMLSRRIDSFEDEDFIR
                     FNTMTYRELLEKLAQTAKIRMQTLHQAFYRVRDELNIGDFLNMQTIAQIKNGFNRFLL
                     HHSFHKFELDYRLVGSKIHPTKFTDKDGKPRAVKKADLGRFEDTEHRPAAGYLFDEIF
                     YDSDIEHENVANNQIEGVTVFTKIPRNSIKIPVAGGGTYSPDFAYIVKTKSGEILNFV
                     IEAKGTDGAEDLRKSEERKIKHAEKLFAEISKEIKVVFKTQFDGERIAELIGQNMPAG
                     GHSENGH"
     gene            complement(9150..10841)
                     /locus_tag="WHR07_000556"
     CDS             complement(9150..10841)
                     /locus_tag="WHR07_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEZ2129805.1"
                     /translation="MNWLGKSYARLLRNLPPETLISEDKTHNAKPENAGSQNLLIRGD
                     NLEVLKHLKNAYTNSVKMIYIDPPYNTGSDGFVYQDDRKFTPAELACLANIDEDEAAR
                     ILDFTDKGSNSHSAWLTFMYPRLYIARELLKDDGVIFISIDDNEAAQLKLLCDEVFGE
                     GNFIKDLIVNTSEGGGNAKYVVNGHETVLVYAKDITHFDNLKRPKDIRGKKIVINDEL
                     YWIQEDAVREQFGKYGNLHYEDIIEIKGIEFKNKIDKDIENNEYILIPKSYGKTIIGK
                     LRKVSDDFSKFHSILNIGNISKNLTKDGIRELEELFETGKGYSPFETPKPLDLLKRLV
                     LSATFKGNQTDLILDFFAGSGTTAHAVMQLNAEGQNGNRRYICVQLPEKTAEKSEARK
                     AGYPTIFDITKARIEKAAAKIRVEHPDYTGDSGFKIFQTADNFRQHPDKDFSPEQPDL
                     PLNDELSEEQLQTLLTTWTLYDGAALTTPVEPVRLGAYTAYLCEKRLYLMNAGFTSAD
                     LLAFIRKLDDDAAFNPNRVIVFGSNMASAMQHELDQAVRGYANKKEIELNVVIRV"
     gene            complement(11195..11752)
                     /locus_tag="WHR07_000557"
     CDS             complement(11195..11752)
                     /locus_tag="WHR07_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ2129806.1"
                     /translation="MKPKFKTVLTALLLAVSLPSMAATHVLMETDMGNIRLVLDESKA
                     PKTVANFVRYARKGFYDDTVFHRVIDGFVIQGGGFTEDLVQKATDKAVANESGNGLKN
                     TAGTIAMARTANPDSATSQFFINLADNDSLNYKNGQYGYTVFGRVESGMNTVSKIARV
                     KTATHGLYQNVPVQPVKIRRIVVGQ"
     gene            complement(11817..12743)
                     /locus_tag="WHR07_000558"
     CDS             complement(11817..12743)
                     /locus_tag="WHR07_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEZ2129807.1"
                     /translation="MSEMKKTKVHLISGFLGTGKTTALKSLMAQKDPNEKWVIIVNEF
                     GEIGIDGAVLSDNGIPVAEIAGGCLCCTAGPQMGVTVQKMLRDAKPDRLMIEASGLAH
                     AASVIDELKAKPLDSLLEIGAVFTVVNPRQFINPDYAQQALYKDQIGICDVLVASKTD
                     LCTPEQLAEFHDKAAKLFPPKAKVVEVQNAQLDIRWLDIPVIEKSRYRLKALPDNTMG
                     FQSQGFTFPAGRDFDGEKLTNFFNDLPKMTEGLVRAKGVFQVLGTWVWLNWVDGQWGA
                     NQVSWRRDSRFELIAKSFDADLIEQKLKDALE"
     gene            complement(12731..13207)
                     /locus_tag="WHR07_000559"
     CDS             complement(12731..13207)
                     /locus_tag="WHR07_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HEZ2129808.1"
                     /translation="MKTNFKQKIIEQARSEGLQVTALREQVLDIVLQQSGVIKAYNVL
                     SQMQQQSEGVLAPPTAYRALDFWAEQGVLHKVAAVNGYILCSHAQHECDDHCHDHEEA
                     EAHHSAFILVCTECGTADEQTLSHEWAALRAGVAESGFALKEEHVVLTGICKKCQK"
     gene            complement(13278..13733)
                     /locus_tag="WHR07_000560"
     CDS             complement(13278..13733)
                     /locus_tag="WHR07_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HEZ2129809.1"
                     /translation="MKKPKILFVCLGNICRSPMAEYILRRRAAEAGIPLEADSAGTSG
                     WHDGEDMHRETAKILKKHGIDASGFTSRKIRQSDAAAFDCIIAMDGKNLSELERTFGR
                     RPEKIFKLTDLIPESGYDHVPDPWYTGDFEETFRLADAGCRALLEKISK"
     gene            complement(13858..14973)
                     /locus_tag="WHR07_000561"
     CDS             complement(13858..14973)
                     /locus_tag="WHR07_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HEZ2129810.1"
                     /translation="MKIVIAPDSFKESLTAQQVAEAIKRGFQQSIADVECLLCPVGDG
                     GEGTVDAIRHSLDLEEKCLQVTGPFGQKEVMRYFQKEQLALFEVADLVGLGKIPLEKR
                     NPLQIQTRGIGELIRHLISQEIKEIYIGVGGTASNDGGIGIAAGLGYQFYDEDGNALP
                     ACGQSLLNLASVSTENRYKIPEDVHIRILADVVSPLCGHQGATYTFGKQKGLDSTMFE
                     AVDQAIQDFYEKVSPATLKLKGAGAGGGIAGGLCAFAQASIVSGIDTCLDLIDFDKKV
                     SDVDLVIVGEGRLDRQSLAGKAPIGVAKRTPVGVPVVAICGSLVEDLPSLPFENIQAA
                     FSILEKSEPLEDSLKNASLYLEHTASNIGHLLNMPKI"
     gene            complement(15087..16184)
                     /locus_tag="WHR07_000562"
     CDS             complement(15087..16184)
                     /locus_tag="WHR07_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HEZ2129811.1"
                     /translation="MNQTFTLPDTRPYPQNPIKNHLLLNAYQLAHNSSQASRKLSSGQ
                     LQTEIRGMLEQNHYINLSLALTMSPDAGTYAALLSSVNAVLDCEKEGEVQWFALPVVL
                     VSGCKKERAIEMKLPTEGLFACLQNYPHLRALTQETQWLPYLVHSSDLSAVAPDEWWR
                     AKQNTEAAAQHLRRFAPRPLLLPEGQSVHVVYALGFGSGKVQTALGQNLLQAGLPLMQ
                     VWQENLASEGVTLFANPLSPDSPVRALSDGSHTRQRMAMDVFAANAIRAVRMQSPRVG
                     VVAAAKAGGQILFGFNATDGAFEVVPQVFSWQLSFTDNIGVIQQNFLDLMAECRVEHV
                     YLLHNPLGEQESIPSYAEALKREGHNPFFSA"
     gene            complement(16266..17849)
                     /locus_tag="WHR07_000563"
     CDS             complement(16266..17849)
                     /locus_tag="WHR07_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase regulatory domain-containing
                     protein"
                     /protein_id="HEZ2129812.1"
                     /translation="MPNKKKKAAFARAATENGVPDVSNIKNSYDDLMYESKAFSQTAI
                     NALEARARMMGLQPAPAANAKVLELGCSMGGNIITQALYYPDAEFVGIDLSGRQVAQG
                     NAIIEKMGLKNVRLEEKDILTVDESFGKFDYIIVHGIWSWVPDAVKDKIFSICRNNLT
                     KHGIAYISYNVYPGWKRQEQLREIMYFAGRDVLEEPLEARTRKGLDALKALAEILEND
                     KGLGGGGKLPAIQKILNHNTYYVAHEYMEIFNDPIYVNGFIEWANRHRLAYIGDTDLH
                     ASFVSWMAEHTRERILALAGGDYIAKEFYSDILSDRQFRRSLLCREEVGDTVRRDESV
                     AVEVIESLNFRPARGETINFDENDTLLSGIRDVMKTGEAFKTEDVAENLARRFPGLTF
                     DRMKINSQLLLQTILGRFSVSSDNAGKQFFEDHKTYVPARFTDYVAAFVEHGAEAFVQ
                     PANRYNESTPSFGYGHLYIMRQLSRPTSKQALIETVAENLNIVSTTPDGLTFHPPAEV
                     YVEEILADLADRHFLVSAD"
     gene            complement(17997..18209)
                     /locus_tag="WHR07_000564"
     CDS             complement(17997..18209)
                     /locus_tag="WHR07_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HEZ2129813.1"
                     /translation="METLILDIGGMSCGGCVKSVTRILEGVKGVASVEVSLENKSATV
                     GYDPAQTDAGALIEAVEDGGYDAALK"
BASE COUNT         4362 a         4860 c         4429 g         4774 t
ORIGIN      
        1 cccgaaaaca acgtttcccg ttttcagacg gcatacgata tggacaattt catccggccg
       61 gtatagtgtt catcctgcgg cggcatcttt ccgatggcgc attttttcaa tattaattat
      121 ccgacttaca aaggtaaaaa catgactgtc cgtatcgaac acgatttatt gggcgaccgc
      181 gagattcccg ccgaagtgta ttggggcatc cacaccctgc gcgccattga aaactttaaa
      241 atctccacac aaaaaatttc tgacgtgccg cagtttgtcc gcagtatggt gatggtgaaa
      301 aaggcgacgg cacaggcaaa cggtgagttg ggcgcggtca agcccgaaat cgccgccgcc
      361 attgaaaaag cctgcgacga agttctgctg aacaaccgct gcctcgacca attcccgtcc
      421 gacgtgtatc agggcggtgc gggtacttcg gtcaatatga acaccaacga agtcatcgcc
      481 aacctcgcat tggaagtctt gggatacgaa aaaggccgct acgacatcgt caatccgatg
      541 gatcacgtca atgccagcca atcgaccaac gatgcctatc ccacgggctt ccgccttgcc
      601 gtgtattaca gcatcggcga attgctcgac aaactgactg tcctgaaaaa cgcctttgcc
      661 gccaaagccg aagaatttaa agacgttttg aaaatgggcc gcacccagct tcaagatgcc
      721 gtgccgatga ctgccggcca agaattccaa tctttccaag tgttgttgga agaagaaatc
      781 ctcaacctcg accgcacccg ccaactgctg ttggaagtca atttgggcgc aacggcaatc
      841 ggcacgggcg tgaacacgcc caaaggctac gccgaactgg tggtcaaaaa actctccgaa
      901 gtcagcggct tgccttgcaa actgaccgaa aacctgattg aggcgacctc cgactgcggc
      961 gcatatgtga tggtacacgg cgcattgaag cgcacggcgg tcaaactctc caaaatctgc
     1021 aacgacttgc gcctgctctc ttccggcccg cgtgccggct tgaaagaaat caacctgccc
     1081 gaattacagg ccggttcttc cattatgcct gccaaagtca atcccgtgat tcccgaagtg
     1141 gtcaaccaag tctgcttcaa agtcatcggc aacgacacga cgattacctt cgccgccgaa
     1201 gccgggcaac tgcaattaaa cgtgatggag ccggtcatcg cccaatgtat gtttgaaacc
     1261 atttccctct tgggcaatgc cgcagtcaac ctgtccgaca aatgcgtcaa aggcattacg
     1321 gtcaaccgcg aaatctgcga acgttacgtt ttcaactcca tcggtttggt gacttatctg
     1381 aatccgtata tcggacacca caacggcgat ttggtcggca aaatctgcgc ccaaaccggc
     1441 aaaggcgtgc gcgaggttgt cttggaacgc gggctgttga gcgaagaaga actcaaccgc
     1501 atcctctctc ccgagaacct gatgaacccc catctgtaac gttgcagaca aatgccgtct
     1561 gaagcaggga tgctgcttca gacggcattt tgttatatca atcagccgga ttatatgccg
     1621 aacagtacct tgacttcccc ccaataaaac aggcaggcga tagaacacag tgccaacacg
     1681 attcccgccg tattgattgt gttgattttt tccttaaaga acaatgcgcc cgaaagcgta
     1741 cccaaaacaa tcacgccgat attcataccg gcaaaaacca aggtcggatt atccttcatc
     1801 atttggtgcg cggtgatgta ggttacgata ttcataaaat tcaaaccgcc caagaatatg
     1861 ccgccgacca cactctcaac acgccatctg accgatttgg caaacaggca ggcaaacatc
     1921 agcacacccg ccagcacaaa tgcaaccagc aggttgcccg caaatgccgt tccgcttttg
     1981 gcaagctgtt tgaacaggat atcgataatg ccgtaacctg cccacacgcc cagcagcaat
     2041 gccgcctgcc gccacgcgct tcctgatttt ttgccaccgc tgtgtttcca aagcaggcag
     2101 aacagtgcgg caaatgcgag gcacagcccg attagtttgc cttcgctgag tttttcgcca
     2161 aacagcgtca aggcggcaac aatcggcaaa aacagcgaca aacgctgcgc cgcgtcggat
     2221 ttgacgatac cggcggcttc cacagatttg cccattatca cgaatacgga cggcagcagc
     2281 acgcccaaag cggcaaacag cggccacgtc ggcaaaaatg cgccgatatt gccgatatcc
     2341 ggcttcaata ccagcagggt cagtatgacc gcgaccacat aattgacggc gaccgcctgc
     2401 gcgatgtcga tttttttctt ccttgccatt ttcagcaaaa tggaaaccga cacgctgaac
     2461 acgatgctga ttaacaggta agccatacta tatccatttc tcgggtgcaa ccgccctgcc
     2521 gccgttgaag cggataaagc cggcgatgat gcggtagaaa taccagacgt tcgttgcaat
     2581 aataatcagc acgccgatac ccaaaagggc agtcagcgca cccaaaatat aaagccaaaa
     2641 tgtgcgccaa aaggttttaa tcaggtattc ggtatgtgcg gcatagacaa tgctgtccaa
     2701 actgttccgt ttcatatagg cgagaatcac gccgactatg ggcatatagg cgaaaatcac
     2761 gccgactatg ggcatgaaca gcatgattgc acccaaaccg aacaggatgt aggcggcgag
     2821 gacatagttg cgcccgcttc cgccgccgga cggttcgtaa gcatggcgcg aacgtgaggc
     2881 ctgccgttca aacgcctgtc ttaacgcctg ttcgcggcgc atctgttcgc ggtaaaactg
     2941 ctccctgcgc gcctgttcac ggcggaatgc ctcttcctgc cgcccgcgtt cctcatgccc
     3001 tctgaaagac gcgtcgtatt gcgtccgttt cgacaggtcg gaaagcgtat cgtaagcccg
     3061 ttggatttct ttgaactttt cttccgcctg cggattaccc ggattgcggt cgggatggta
     3121 tttcatcgcc agcttgcggt aggcgcgttt gatttcgtcc gcccccgcct gcggcgacac
     3181 gcccaatacg gcatacaaat ctttgtccat attgctcctt atacttcccc gtcaaaccgc
     3241 tgcctgtatt gttttcgggt tcaaaatatt taaatctccg ggacggatgc cgataatgaa
     3301 cccgcgtttt ccgccgttga tatagatggt ttccaaatcc atcaccgact gttcgacgta
     3361 aatatccaat tttgtccgga tgccgaacgg cgttgtgccg ccgaccagat agcccgtcca
     3421 cttgtttgcc tgtgcgggcg tggcgggttc gatgtgtttc gcacccaaat gccgcgccag
     3481 attgcgggtt gaaatctgtt tgtcgccgtg catcaagaca atcagcccct taccgttttc
     3541 atcttgcaaa acaatggttt taataaccaa gtgttcgtct ttgccgaaca ggtgcgcaaa
     3601 ttgggccgta ccgccgtgtt cctcgtaggg atagatgaaa ggttcgaact tgatgccgtt
     3661 ttcacgcaaa acgcgtacgg caggtgttac cggataggtc tgtttactca tttttcgtca
     3721 tgcaaaacat ggaaatcacc caaatgcaat gttaccatat atcccccttt attgaaggaa
     3781 accgatatgg atatccgata tttcggcaca acgccccgct attccgaagc cgtcggcgca
     3841 aacggcttga ttttcctctc cggcatggtt cccgaaaacg gtgaaacggc tgccgaacag
     3901 actgccgacg tgcttgccca aatcgaccgc tggctggcgg aatgcggctc ggacaaggca
     3961 cacgttttag atgcggtcat ctatctgcgc gatatgggcg actacgcgga aatgaacggc
     4021 gtgtgggacg cttgggttgc cgccggcaga acgcctgccc gcgcctgcgt ggaagctcgg
     4081 ctcgcccgtc cggagtggcg cgtcgaaatc aaaataaccg ccgtgaagaa agacgcggca
     4141 accgaataaa cagatttcct ttatatttca gagtacgcaa atgatgaaaa ccttactgcc
     4201 ctttttcggc gtggtgcgcg tcagcggcga agaccgccaa accttcctgc acggacagct
     4261 ttccaacgac atcaataatc ttcagaccgg gcaggcgtgt tatgcgactt acaacacgcc
     4321 caaaggccgc gtcatcgcca atatgattgt cgtcaaccgt ggagacgatt tgctgctgat
     4381 tatggcgcaa gacttgcttg aagcaacggt caaacgtttg cggatgtttg tgttgcgtgc
     4441 caaagccgtt tttgaaatcc ttgaagatta cgccgtcggc gcggaattgg cagcatccgc
     4501 cgaaccgctt gccgcgcaag aaccctgcct tgcctttacc gccgaatgcg gttcagacgg
     4561 catctgttcc gtcgtcctgc cccatcgggg cattttgcac atcgcccccg aaaccgccct
     4621 gccgccttat gatgccgccg ccgaaaacgc gtggcggctg cacgaaatcc tcagcggtta
     4681 tccgtggata tgcgcggcta ccaaagaaac tgccgttgcc caaatgctca accagcacat
     4741 catcggcggt gttcacttca aaaaaggctg ctacccggga caggaaatca ttgcccgtgc
     4801 ccagtatcgg gggcaggtca aacgcggctt ggcggtattg tcgggaaatt cggccgtcga
     4861 agcaggaacc ctgctgacgg cagacggcga agagaccggc atcgtgctcg acagcgttaa
     4921 agattcggaa agctttaccg cccttgccgt gattaaattc tccgccgcac aaaaagaact
     4981 gaccgtccca aacggcggta tcttcaaagc ggttcatccc ttctttaaaa ccgaaaatgc
     5041 agaataatcc ctctaatgcc gtctgaacct ttttcagacg gcattttaaa atcgcccctg
     5101 ttttcggtta caatgccgca tccctaattt ttcaaaccac cgccatgtcc aaaaaaacca
     5161 aacaagaact cgaaaacaac aaactcagca aacgcctgcg ccacgccgtc ggcgacgcga
     5221 ttaacgattt caatatgatc gagccggacg acaaaatcat ggtctgcctc tccggcggca
     5281 aagacagcta tgccctgtta gacatcctgc gccagctcca agccagcgcg ccgattgatt
     5341 ttgaactggt cgccgtcaat ctcgaccaaa agcagccggg tttccccgaa gaagtattgc
     5401 cgacctatct cgaaagcata ggcgtgccgt acaaaatcgt cgaagaagac acctactcca
     5461 ccgtcaaacg cgtattagac gaaggcaaaa cgacttgttc gctgtgcagc cgcctgcgcc
     5521 gcggcatcct ctaccgcacc gcaaaagaat tgggctgcac caaaatcgcc ttaggacacc
     5581 accgtgacga catccttgcc accatgtttt taaatatgtt ttacggtgga aaactcaaag
     5641 ccatgccgcc caagctggtg agcgacaacg gcgaacacat cgtcatccgt ccgctggcgt
     5701 atgtaaaaga aaaagactta atcaaatacg ccgaattaaa acaattcccc atcatcccgt
     5761 gcaacctctg cggctcgcaa cccaacctgc aacgccaagt catcggcgat atgctgcgcg
     5821 attgggacaa acgctttccc ggccgcatcg aatcgatgtt ctccgccctg caaaacgtcg
     5881 tcccttccca ccttgccgat accgaactct tcgactttgc cggattggaa cgcggtcaaa
     5941 ccctgaaaca cggcggcgat ttggcgtttg acagcgaaaa aatgcccgaa cgtttttcag
     6001 acggcagcga agaagacgaa agcgaaatca aaatcgcgcc gcaaaaagcc gaacgcaaag
     6061 tcatcaacat tctggcgaac aagccgaaaa cctgcggcgc gtaacccccc gccgtcaaaa
     6121 atgccgtctg aagcccgttt ggcgtttcag acggcatttt aaaatcccga agcagacggc
     6181 ttccaaacat ttgtttctca gtgtccgttt tcagaatgcc cgcctgcggg catattttgc
     6241 ccgatcagtt cggctatcct ctcgccgtca aactgcgttt tgaacaccac cttgatttct
     6301 ttggaaatct cggcaaacag cttttcggca tgtttgattt tccgctcttc gctttttcgc
     6361 aaatcttccg ccccgtcagt ccctttggct tcaatcacaa agttcagaat ctcgccgctt
     6421 ttggttttca cgatataggc aaaatcgggc gaatacgtgc cgccgccggc aacggggatt
     6481 ttgatggagt ttctcggtat tttggtgaat acggttacgc cttcaatttg gttgttggcg
     6541 acattttcat gttctatatc cgaatcgtag aaaatttcgt cgaagagata gccggcggca
     6601 ggccggtgct ccgtatcttc aaatctgccc aaatctgctt ttttcaccgc gcgcggtttg
     6661 ccgtctttat cggtaaattt ggtcggatgg attttgctgc cgacaagccg gtaatccagt
     6721 tcaaatttat ggaaggaatg atgaagcaaa aaccggttga agccgttttt gatttgggcg
     6781 atggtctgca tattcaaaaa atcgccaatg ttcagttcgt cgcggacgcg ataaaacgcc
     6841 tgatgcaaag tctgcatgcg gatttttgcc gtttgtgcca gtttttccag aagctcacgg
     6901 taagtcattg tgttaaaacg gataaaatct tcatcttcaa aactgtctat gcggcgggaa
     6961 agcataagcc cgttgttgat ataagcttcg tttaccgccg tgcgtatgcc tgcctgcggg
     7021 aatttggcgg cgttttcacg caaataggcg gtaaataaat cgacaaattc ggcttcatcc
     7081 ttgattttgt actgcaaaac ggctttatgg tgaatcagct cccacaaggc tttgagttct
     7141 tcatatttgc cttcgcgcat gatgatggtg tctttgccct cgtctttggc gttgctgact
     7201 ttgcctttgt ccaaaccttt ggggaaggct tcgggatagg cggcttttaa tttgtcatag
     7261 ccgtcttcgg caaagttttc attgtcgtca atgatgccgt ctgaaaacag ttggtttacc
     7321 aataccagcg gtttgatatc ggggtatttt tgcaatattt tttgtttcag ctcttcggta
     7381 aactttttgg agatttcttc ctgaaaagaa ttgtcgttga tttcgccgac aagctgcttc
     7441 acaaagtctt tttcgctgct atcgacaaaa taattcagtt tgtacggtac atcgcgcacc
     7501 cgcgccatca gctcgtttac cggcaggcgc aggccgcgtc cgacttcttg cagcttggaa
     7561 gtcgtgctgc cgctggaacg cagtttgcaa atctggaaaa cgttgggatt gtcccagcct
     7621 tcgcgcagcg tccatttgga aaaaataaag cggcgcgggt tgtccaaaga cagcagtttt
     7681 tccttatcgt gcaggatttc attgatttcc tgctcgattc tatcgtcgct gtctgtattg
     7741 tctttggaaa aatagccgcc gtggcaggcg gatacatcgt ccaacgtctt ttgcaggtaa
     7801 tcgcggtaaa acgggtcgct ttccgttttc agacggcgtg ccgcttccac gcgaatccag
     7861 ctttcaaatt tatctttcag gctgcctgaa agctcgttgc cgctgcggta gcccgcgata
     7921 tcgtcaataa aaaacagcgt cagcggcttg attttgggct gtggcgcgcg ttctgccaaa
     7981 agcgcgcgtt ccagcttgaa atgttcggca accgcccgct gcatcatcgc atcctgcacc
     8041 gtttgcgaat aggaataagg gttgatgacg gcacccgttt tcaactccaa gccgttgctt
     8101 aacaccacca cggttttatt cattttgtcg attttcaaat ccgaaatagc cggatggatt
     8161 tgcgccaaat cttcgccttt tgccagtttg aacgtctgct ttttgtcctt ttcgtttaat
     8221 tcaaatttcg cttctttgcc gcccgacgac accagtttta ccgccgcatc catgccgccc
     8281 tgcatttctt cctgaaacac gcgcacgcct ttgaccagcc cgtcgttaaa cgcgtctact
     8341 gccgtcaaac ggtaaagcaa gttgtaatat tcatcgttaa atgtcgcacc gtagcgcaaa
     8401 atatattgcg gttttaagcg tttgatattg ccccacgttt tcgcgctctc ccgggtcggg
     8461 aatttatgcg gttcgtccac aatcacaaac gggcgcacgg cggccaatgc atcaacggga
     8521 ttgtcaaaca aatctttcaa tgccttgtcg cccgtatcgt tcatggacga cgaattaacc
     8581 atgcccgcgt taatcagcag cacatggatt tcctttttgt tttccgcttt gacaaattgc
     8641 tcaatcgtta tgggcgcatt ggactttttg cccttattct ttttcgcgct ttccaccaca
     8701 taggttttca ggcgcacgcc ttcataatcg ccgccgaaat cctgttcaaa atgctctgcc
     8761 aaagccttgc tttgcaaaaa ctgctgtgtt cccgccttaa tggacaaagt cggcacgacc
     8821 acgataaatt tgaacacgcc cagccaacgg tgcagctcga acatggtttg tgtgtaggta
     8881 taggttttgc ccgtgcccgt ttccatggaa atatcaagga tattttggtc gtccgaacgg
     8941 tcggggaatc ggccgtctat accgttttgg ctttgcactt tcaggatatt gtttgcgtat
     9001 tgttttgcag caaacaaaag ttcgggattt tcgtctgccg tccgatattt gggcgttgcc
     9061 ccgtcaaaca cgcccaaaac cgccgaaacc gcccgcattt ggtgcggctg gtttttctcg
     9121 taattaaaac cgctcatgaa ttgcctccgt caaaccctga taaccacatt caactcaatc
     9181 tcttttttat tggcataacc gcgaaccgcc tggtcaagtt cgtgctgcat ggcgcttgcc
     9241 atattgctgc cgaatacaat cacgcggttg ggattgaaag ccgcatcgtc gtccagcttg
     9301 cggataaacg ccaacaaatc ggcagaagta aaaccggcat tcatcagata cagccgtttt
     9361 tcgcacagat acgccgtgta agcccctaac cgcacaggct caaccggcgt ggtcagtgcc
     9421 gccccgtcat acagcgtcca ggtggtcaga agcgtttgca gctgttcttc gcttaattca
     9481 tcgttaagcg gcaaatccgg ttgttcgggc gaaaaatcct tgtccggatg ctgcctgaaa
     9541 ttgtctgccg tttgaaagat tttgaagccc gaatcgcccg tgtaatcggg atgttcgacg
     9601 cggattttgg cggcggcttt ttctatgcgg gctttggtga tgtcgaagat ggtcgggtag
     9661 cctgctttac gggcttcgga tttttcagcg gttttttcgg gaagctgtac acagatatag
     9721 cggcggttac cgttttgtcc ttcggcgtta agctgcatca cggcgtgggc ggttgtgccg
     9781 ctgcctgcga agaagtctag gattaggtca gtttgatttc ccttgaaagt tgcagaaaga
     9841 actaatcttt tcaataaatc taatggtttt ggtgtttcaa aaggagaata accttttcca
     9901 gtttcaaaca actcttctaa ttcacgaata ccatctttag taagattttt acttatattt
     9961 ccaatattta agatgctatg aaatttggaa aaatcatcgg atacttttct aagttttcca
    10021 ataattgttt tcccataaga cttcggaatt aagatatatt cattattttc aatatcttta
    10081 tcaattttgt ttttaaactc aattcctttt atttcaataa tatcttcgta atgcaagttc
    10141 ccatatttgc caaactgttc gcgaacggca tcttcctgta tccaatataa ttcatcattg
    10201 attacaattt ttttgccgcg tatatctttt ggtcttttta gattgtcaaa atgagtaata
    10261 tctttcgcat aaactaaaac agtttcatgc ccatttacaa catattttgc attaccacca
    10321 ccttctgatg tattaacaat taaatcttta ataaaattcc cttccccaaa cacttcatca
    10381 cacaacaact tcaactgcgc cgcttcgtta tcgtcaatcg agataaaaat cacgccgtcg
    10441 tcctttaaca gttcgcgggc gatatacagg cgcggataca taaaggtcaa ccatgcactg
    10501 tgcgagtttg agcctttgtc ggtgaaatct aaaatccgcg cggcttcgtc ttcgtcaata
    10561 ttggctaagc aggcaagttc ggctggtgtg aatttgcggt cgtcctgata gacaaagccg
    10621 tctgatccgg tgttgtaggg cgggtcgatg taaatcatct tcacgctgtt tgtgtaggcg
    10681 ttttttaagt gtttcaacac ttctagattg tcgccacgaa tcagtaggtt ttggctgcct
    10741 gcattttcgg gtttggcgtt gtgcgtcttg tcttcactta tcagggtttc gggcggcagg
    10801 ttgcgaagca ggcgagcata tgatttgccc agccagttca tttcgtaaaa ttcgcgtccg
    10861 atgtcggtct gtggcgcaat ttcggcttgt aatctgtcga taaggaaatt tccgtctgcg
    10921 tcaaaacagg cgggaaacag ttttttgagc tgttcgagtt gggtagagtt ggcggtaatg
    10981 ccgtctgaag tgtagattgc ctcggtgttc accccggctg tgtcgattag atcaggggct
    11041 tgggttgggt tgggttgggt tgggttgggt tggcagcatt ttaaaatcct cggtttgaat
    11101 ttgtcaatat caactatctg ttttaaaata ttttttcact tcagacggcg ttttttgtga
    11161 aacgggcgac gccgtctgaa catctgtctg cgtgttactg tccgacaaca atgcgacgga
    11221 ttttgacggg ctgtacgggt acgttttgat aaaggccgtg cgtggcggtt ttgacgcggg
    11281 cgattttgga aacggtgttc atgccgcttt cgaccctgcc gaaaacggta tagccgtatt
    11341 gtccgttttt gtagttgagt gaatcattgt ccgccagatt gataaagaat tggctggtgg
    11401 cggaatccgg attggccgtc cgcgccatgg cgatggtacc ggcagtgttt ttcaagccgt
    11461 taccggattc gttggcaacg gccttatcgg ttgccttttg taccaagtct tcggtaaatc
    11521 cgccgccctg gataacgaaa ccgtcgataa cgcggtgaaa aacggtgtcg tcgtaaaagc
    11581 cttttcgggc atagcgcacg aaattagcaa cggtcttggg ggctttggac tcgtccaaaa
    11641 ccaaacggat attgcccata tcggtttcca tcaaaacatg ggttgccgcc atagacggca
    11701 gggaaaccgc caaaagcagc gcggttaaaa cggttttgaa tttgggtttc atcccgtcct
    11761 cctcagacct tcagacggca ttttcatttc atatgccgtc tgaaggcgcg tgaacgctat
    11821 tccaatgcgt ctttgagctt ttgttcgatt aaatccgcat caaacgattt ggcaatcaat
    11881 tcaaaacgcg aatcgcgccg ccatgagact tggttcgcgc cccactgtcc gtctacccag
    11941 ttgagccaca cccacgttcc caatacttga aacacgcctt tggcgcggac gagtccttcg
    12001 gtcattttgg gcaggtcgtt gaaaaagttg gtcagctttt cgccgtcgaa atcgcgtccg
    12061 gcggggaatg tgaaaccttg cgactggaag cccatggtat tatccggcag ggctttgagg
    12121 cggtagcgtg atttttcgat gacgggaata tcgagccacc ggatgtcgag ttgtgcgttt
    12181 tggacttcaa ccactttggc tttgggcggg aacagttttg ccgctttgtc gtgaaattcg
    12241 gcaagctgtt cgggggtgca taaatcggtt ttgctggcga ccaatacgtc gcagatgccg
    12301 atttggtctt tatacaacgc ctgttgcgcg taatcggggt tgatgaactg gcgcggattg
    12361 acgacggtaa agacggcgcc gatttccaaa aggctgtcca gcggtttggc tttgagttcg
    12421 tcgatgacgc tggctgcgtg agccagtccg cttgcttcaa tcatcaggcg gtcgggcttg
    12481 gcgtcgcgca gcattttctg cacggttacg cccatttgcg ggccggcggt gcaacacaaa
    12541 cagccgccgg cgatttctgc cacagggata ccgttgtcgc tcaataccgc gccgtcaatg
    12601 ccgatttcgc cgaactcgtt gacgatgatg acccattttt cgttcgggtc tttttgcgcc
    12661 atcaggcttt tgagcgcagt ggttttgcct gttcccagaa aacctgaaat caggtggact
    12721 ttggtttttt tcatttctga cattttttac agattccagt taaaacaacg tgttcttctt
    12781 tcagcgcaaa gccgctttcg gcaacgcctg cgcgcagtgc cgcccactcg tggctgaggg
    12841 tttgctcgtc cgccgtgccg cattcggtgc agaccaaaat aaacgcgctg tggtgcgctt
    12901 cggcttcttc gtggtcgtgg caatggtcgt cgcactcgtg ctgcgcgtgg ctgcacaaaa
    12961 tatagccgtt gaccgccgcc actttgtgca aaacgccctg ctccgcccaa aaatcaaggg
    13021 cgcggtaggc ggtaggcggt gcaagcacgc cctcgctttg ctgctgcatc tgcgacaaga
    13081 cgttgtaggc tttaatcacg ccgctttgct gcaagacaat atctaatacc tgctcgcgca
    13141 aagcggttac ctgcaagcct tcgctgcgtg cctgttcgat aattttctgt ttgaaatttg
    13201 ttttcataaa ttctctgttt atgccgtctg aacaaccgat acggcaggag gcggttttat
    13261 atttgtattc aattgcttta tttggaaatc ttttccaaca atgcccgaca gcccgcatcc
    13321 gcaagcctga aggtttcttc aaaatcgccc gtataccacg gatcggggac atggtcgtaa
    13381 ccgctttcgg gtatcaggtc ggtcagcttg aatatttttt ccggccgcct gccgaaggtt
    13441 ctttccaatt cggacaaatt cttgccgtcc atcgcgatga tgcagtcaaa cgccgccgca
    13501 tcgctttggc ggattttgcg gctggtaaag cctgaagcat cgataccgtg ttttttcaat
    13561 atctttgccg tctcgcggtg catatcttcg ccgtcgtgcc agcccgatgt ccccgcgctg
    13621 tccgcttcaa ggggaatgcc cgcttcggcg gcgcggcggc gcaaaatgta ttccgccatc
    13681 ggcgaacggc agatgttgcc gaggcagaca aaaaggattt tcggtttttt catatcccct
    13741 ccctgttccg gcgcgatgcc gtctgaagcg gaaacccttt cagacgtcat cggtcggtta
    13801 atcgtaaccg cataaggcag aaccagccaa aacatccatc tggaagaaat ggtttggcta
    13861 aatcttaggc atatttaata agtgtccaat attagaagcc gtatgctcca aatagagact
    13921 ggcatttttc aaactatctt ctaaaggttc acttttctcc aaaatagaaa aggcagcttg
    13981 gatattttca aatggcaggg aaggcaaatc ttcaacgaga ctgccacaaa tagcgacaac
    14041 aggaactccg acaggggttc tttttgctac accaataggc gctttccctg ctaaactttg
    14101 acgatctagt cttccttcac caacgataac caagtcaaca tctgacactt tcttatcaaa
    14161 gtcaatcaag tccaggcagg tgtcaattcc agatacgata cttgcctgag caaaggcgca
    14221 caaaccacca gcgatgcctc caccagctcc tgctccttta agttttaatg ttgcagggga
    14281 gactttttca taaaaatctt gtattgcctg atctacggcc tcaaacatag tagaatccaa
    14341 ccctttttgc ttgccaaacg tataggtcgc accttggtgt ccacataagg gactcacaac
    14401 atctgctaaa atacgaatgt gaacatcttc aggaatttta tagcgatttt ctgttgaaac
    14461 agaagctagg tttagtaagg attgaccgca agcgggtaag gcatttccat cctcatcata
    14521 aaattgataa cctaaaccag cagcaatccc aatacctcca tcattactgg ccgtaccgcc
    14581 aacgccaata tagatttctt taatttcttg actaatgagg tggcgaatca attctccaat
    14641 accacgagtt tggatttgta atggatttcg tttctctagc gggatttttc caagaccaac
    14701 caaatcagca acttcgaata gggctagttg ttctttttga aaatagcgca tgacttcttt
    14761 ttgtccaaaa ggtcctgtca cttggagaca tttttcttct aggtcaagag aatgtcggat
    14821 agcatctaca gtgccttctc ccccatcacc gacaggacag aggagacatt ccacatctgc
    14881 tatcgattgt tggaagcctc tttttattgc ttcagctacc tgttgagctg tcaagctttc
    14941 cttaaacgaa tccggtgcaa ttacaatctt catatttata attcatcctt tcgtttcact
    15001 caaggcacaa cacagaatga aaaagtgttg tgctctttat tttgatttat tatagaaatg
    15061 agaaagccta tcactactac aaatcactat gcgctgaaaa acggattgtg cccttcccgt
    15121 ttcaatgctt ccgcatagct cgggatgctt tcctgttcgc ccaagggatt gtgcaacagg
    15181 taaacgtgtt ctacacggca ttctgccatt aaatccaaaa aattttgctg aataacgcca
    15241 atattgtcgg taaaggaaag ctgccacgaa aacacctgcg gcacgacttc aaacgcgccg
    15301 tcggtcgcat taaacccgaa taaaatctgt ccgcccgcct ttgccgctgc gaccacgccg
    15361 acgcgcggac tctgcatacg gacggcgcgt atcgcgtttg ccgcaaacac atccatcgcc
    15421 atgcgctggc gcgtgtggct gccgtcggaa agcgcgcgta ccggagaatc cggggaaagc
    15481 ggattggcaa acagcgtaac gccttccgat gcaagatttt cctgccatac ctgcatcaag
    15541 ggcagacctg cctgaagaag gttctgaccc aatgccgtct gaactttgcc gctgccgaaa
    15601 cccagcgcgt aaacgacgtg gacggactgc ccttcgggca aaagcaaagg gcgcggggcg
    15661 aaacggcgta agtgttgcgc cgccgcttcg gtattttgtt tggcacgcca ccactcatcc
    15721 ggcgcgaccg cactcaaatc ggaggaatgt acaagataag gcagccattg cgtctcttgc
    15781 gtcaacgcgc gcaggtgcgg atagttttgc aaacaggcaa acaatccctc cgtcggcagc
    15841 ttcatctcga ttgcccgttc cttcttgcag ccggacacca gcacgaccgg cagggcgaac
    15901 cactgcactt cgccttcttt ctcgcaatcg agtaccgcgt tcacactgga aagcagcgcg
    15961 gcataagttc cggcatcggg cgacatcgtc agcgcgaggg aaaggttgat atagtggttt
    16021 tgctcaagca tccccctgat ttcggtttga agttggccgg acgagagttt gcgcgaagcc
    16081 tgggaagaat tatgcgccaa ctggtaggca ttgagcagca ggtggttttt aatcggattt
    16141 tggggatacg ggcgcgtatc gggcaaggta aatgtctggt tcatatatgt cgtgtaccgc
    16201 ttttcgcagt gtgtgttttt cctgtttgaa aatatatcgg acggattgcc gtcgggactt
    16261 gcccgtcaat ccgccgaaac gagaaaatgc ctgtctgcca agtctgccaa tatttcttcc
    16321 acatacactt cggcaggcgg atggaatgtc aaaccgtcgg gcgtggtgct gacgatgttc
    16381 aagttttcgg caaccgtttc aatcaatgcc tgtttgctcg tcggccgcga caattgccgc
    16441 ataatgtaca aatgcccgta cccgaatgag ggggtgcttt cgttgtaacg gttggcaggc
    16501 tggacaaacg cttccgcgcc gtgttccaca aaggcggcga cataatctgt aaaacgcgcc
    16561 ggcacatagg ttttatggtc ttcaaaaaat tgtttgcccg cattgtctga tgaaacagaa
    16621 aaacgcccga gaatggtttg caataaaagc tgggaattga ttttcatacg gtcgaatgtc
    16681 aaaccgggaa atcggcgggc gagattttcc gcaacatctt ccgttttaaa cgcctctccg
    16741 gttttcatca catcgcgtat gcccgaaagc agggtatcgt tttcatcaaa gttgattgtt
    16801 tcccctcttg ccgggcggaa attcaaactt tctatcactt cgacggcaac cgactcgtca
    16861 cgcctgacag tatccccgac ttcctcacgg cataaaagcg aacggcggaa ttggcggtcg
    16921 gataaaatat cgctgtaaaa ttctttggca atataatcgc cccctgccaa tgccagaatc
    16981 cgctcccgcg tatgctccgc catccaagaa acaaaagacg cgtgcaaatc ggtatccccg
    17041 atatacgcca gccggtggcg gtttgcccat tcgatgaagc cgttaacgta aatcgggtcg
    17101 ttgaatattt ccatatattc gtgtgcgaca taataagtat tgtgattcaa tattttttga
    17161 atcgccggaa gtttgccgcc gccgcccaag cctttgtcgt tttccaaaat ttccgccagc
    17221 gccttgagcg cgtccaagcc tttccgcgtc cgcgcttcca agggttcttc aagcacatcc
    17281 ctgccggcaa agtacataat ttcgcgcaac tgctcctgcc gtttccagcc agggtaaaca
    17341 ttgtatgaaa tataggcaat gccgtgtttg gtcaggttgt tccggcaaat cgaaaagatt
    17401 ttgtctttaa ctgcgtcagg cacccacgac caaatgccgt ggacgatgat atagtcgaac
    17461 ttcccgaatg actcatcgac ggtcaaaata tctttttctt ccagacgcac atttttcaag
    17521 cccatttttt caatgatggc gttgccctgc gcaacctgcc tgccggacaa gtcgataccg
    17581 acaaattccg catccgggta ataaagagcc tgcgtgatga tgttgccgcc catcgaacag
    17641 cccagctcca agaccttggc attggcggcg ggcgcgggct gcaaacccat catgcgggcg
    17701 cgagcctcca aggcgttgat ggcggtttgg gaaaatgctt tggattcata catcaaatca
    17761 tcatatgaat ttttgatgtt ggacacgtcc ggcacaccgt tctccgttgc agcacgcgca
    17821 aaggcggctt ttttcttttt gttcggcata ttttgtttgt ctgaaggcac tattgcccgc
    17881 aagtttaacc aattcatcct acccgttcaa ctaaatcaaa tgccatctga aggcgcggag
    17941 cgtacttcag acggcatcgg ggaggcgcga aggcttcaga cggcattttt gccgctttat
    18001 ttcaacgcgg catcatagcc gccgtcttca acggcttcaa tcaacgcccc tgcatcggtt
    18061 tgcgcggggt cgtatccgac ggtcgcactt ttgttttcaa ggctgacttc gacgcttgcc
    18121 acgcctttta cgccttccaa tatccgggta acgcttttga cgcagccgcc gcagctcatg
    18181 ccgccgatgt cgaggataag ggtttccatc attttccttt cgttggaact gcaatctgac
    18241 gggcgttatt gtaagtcggg gcgtgaactt gggcaaacgc ggaaacggta cggcggtttg
    18301 gaaaaagacg gacgcttgcg cataatggcg gcaattccca tcaggacgac aacaatgaac
    18361 gcttcacaaa aaccctggtt gagcatcatc gccttggcaa tcggcgcatt tatagtggat
    18421 taaca
//
LOCUS       DAWGKF010000023        17577 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.023, whole genome shotgun sequence.
ACCESSION   DAWGKF010000023 DAWGKF010000000
VERSION     DAWGKF010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17577)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17577)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17577
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.023"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..446)
                     /locus_tag="WHR07_000565"
     CDS             complement(<1..446)
                     /locus_tag="WHR07_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEZ2129814.1"
                     /translation="MQTANKKTILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAG
                     NLESLTDIADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEF
                     IQTNIVGTFNLLEAARAYWQQMPSEQHEAFRFHHISTDEVYGDLGGT"
     gene            complement(447..1490)
                     /gene="galE"
                     /locus_tag="WHR07_000566"
                     /pseudo
     CDS             complement(447..1490)
                     /gene="galE"
                     /locus_tag="WHR07_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223275.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
     gene            complement(1483..2481)
                     /gene="dcm"
                     /locus_tag="WHR07_000567"
     CDS             complement(1483..2481)
                     /gene="dcm"
                     /locus_tag="WHR07_000567"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ2129815.1"
                     /translation="MHTPLTYIDLFSGAGGLSLGFEQAGFQQLLSVEMESDYCQTYRT
                     NFPHHQLLQKDLTTLTEQDLINCLNGQAVDLIIGGPPCQGFSMAGKIGRTFTDDPRNH
                     LFKEFVRIVKIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQNIGYSVECKILSAADF
                     GVPQIRSRVIFIGRRDKGKISFPEPLQISHQTVGSAIGHFPKLAAGESNPHVANHEAM
                     NHSAQMLEKMAFVKNGGNRNDIPEPLRPKTGDIRKYIRYNSNKPAVCITGDMRKVFHY
                     EQNRALTVRELAALQSFPDNFIFCGSKIAQQQVGNAVPPLLAKAIAESILKMSENE"
     gene            complement(2512..4785)
                     /locus_tag="WHR07_000568"
     CDS             complement(2512..4785)
                     /locus_tag="WHR07_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HEZ2129816.1"
                     /translation="MNITQILSQELSATTAQINAAIELLDDGATVPFIARYRKEATGG
                     LDDTQLRRLAERLQYLRELEERKAVVLKSIEEQGKLSDGLRAQIEAADNKTALEDLYL
                     PYKPKRRTKAQIAREHGLQPLADVLLAEQSQDVEAAAQGYLNENVPDAKAALDGARAI
                     LMEQFAEDAELIGTLRDKLWNEAEIHAQVVGGKETEGEKFSDYFDHREPIRAMPSHRA
                     LAVLRGRNEGVLNIALKYQPDDTPITQQSEYEQIIARRFKVSDGHKWLRDTVRLTWRA
                     KIFLSLELEALNRLKEAADTDAITVFARNLKDLLLAAPAGRLTTLGLDPGYRNGVKCA
                     VVDDTGKLLDTVIVYLHQENNMLATLSRLIKQHGVKLIAIGNGTASRETDKIAGELVR
                     EMSKMGLHKIVVSEAGASIYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKID
                     PKSIGVGQYQHDVNQSQLAKSLDAVVEDCVNAVGVDVNTASAPLLARISGLNQTLAQN
                     IVAYRDENGAFDSRKKLLKVPRLGEKTFEQAAGFLRINGGKEPLDASAVHPEAYPVVA
                     KMLAQQGISAAELIGNRERVKQIKASDFTDERFGLPTILDILSELEKPGRDPRGEFQT
                     ASFAEGIHEISDLQVGMILEGVVSNVANFGAFVDIGVHQDGLVHISALSNKFVQDPRE
                     VVKAGDVVKVKVLEVDAARKRIALTMRLDDEPGGAKHKMPSENRSRERTAGRKPQRND
                     RAPANSAMADAFAKLKR"
     gene            complement(4850..5500)
                     /locus_tag="WHR07_000569"
     CDS             complement(4850..5500)
                     /locus_tag="WHR07_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ2129817.1"
                     /translation="MISVEHVSKQYQMRGGMRTVLDDINFSLQKGEKVGILGRNGAGK
                     STLIRLISGVEPPTTGEIKRTMSISWPLAFSGAFQGSLTGMDNLRFICRIYNVDIDYV
                     KNFTEEFSELGQYLYEPVKRYSSGMKARLAFALSLAVEFDCYLIDEVIAVGDSRFADK
                     CKYELFEKRKDRSIILVSHSHSAMKQYCDNAMVLEKGHMHQFEDMDKAYEYYNSLP"
     gene            complement(5497..6294)
                     /locus_tag="WHR07_000570"
     CDS             complement(5497..6294)
                     /locus_tag="WHR07_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_157140410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ2129818.1"
                     /translation="MKALHKTSFWESLAIQRRVIGALLMREIITRYGRNNIGFLWLFV
                     EPLLMTFVIVLMWKFLKADRYSTLNIVAFAITGYPMLMMWRNASKRAVGSISSNASLL
                     YHRNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMPADMFYMLMAWLLMAFF
                     AIGLGLVICSIAFNFEPFGKIWGTLTFVMMPLSGAFFFVHNLPPKVQEYALMIPMVHG
                     TEMFRAGYFGSDVITYENPWYIVLCNLVLLLFGLAMVSKFSKGVEPQ"
     gene            complement(6294..7457)
                     /gene="ctrB"
                     /locus_tag="WHR07_000571"
     CDS             complement(6294..7457)
                     /gene="ctrB"
                     /locus_tag="WHR07_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export protein CtrB"
                     /protein_id="HEZ2129819.1"
                     /translation="MSEQLPVAVATETKAERKKPKKKSWIKKLSPLFWVTVIIPTVIS
                     LVYFGFFASDRFTSQSSFVVRSPKSQSSLNGLGAILQGTGFARAQDDIYTVGEYMRSR
                     SSLDELRKILPVREFYETKGDVFSRFNGFGFRGEEEAFYQYYKNQVMINFDTVSGIST
                     LNVTSFDALESKKINEALLKQGEALINQLNDRARADTVRYAEEVVKTAAERVKEASQN
                     LTDYRIANGVFDLKAQSEVQMGLVSKLQDELIVIQTQLDQVKAVTPENPQIPGLQARE
                     QSLRKEIDQQLRAISGGGHSSLSNQAAEYQRVYLENQLAEQQLAAAMTSLESAKVEAD
                     RQQLYLEVISQPSLPDLAHEPKRLYNIVATLIIGLMVYGILSLLTASIREHKN"
     gene            complement(7472..8647)
                     /gene="ctrA"
                     /locus_tag="WHR07_000572"
     CDS             complement(7472..8647)
                     /gene="ctrA"
                     /locus_tag="WHR07_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export outer membrane
                     protein CtrA"
                     /protein_id="HEZ2129820.1"
                     /translation="MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSE
                     VQIPEVELIDVNHTVAQLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAV
                     LFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKK
                     MANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNV
                     QLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSAR
                     GLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVY
                     RVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFSPVTSGANSINNLTN"
     gene            8782..9915
                     /gene="neuC"
                     /locus_tag="WHR07_000573"
     CDS             8782..9915
                     /gene="neuC"
                     /locus_tag="WHR07_000573"
                     /EC_number="3.2.1.183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (hydrolyzing)"
                     /protein_id="HEZ2129821.1"
                     /translation="MKRILCITGTRADFGKLKPLLAYIENHPDLELHLIVTGMHMMKT
                     YGRTCKEVTRENYQHTYLFSNQIQGEPMGAVLGNTITFISRLSDEIEPDMVMIHGDRL
                     EALAGATVGALSSRLVCHIEGGELSGTVDDSIRHSISKLSHIHLVANEQAVTRLVQMG
                     EKRKHIHIIGSPDLDVMASSTLPSLEEVKEYYGLPYENYGISMFHPVTTEAHLMPQYA
                     AQYFKALELSGQNIISIYPNNDTGTESILQELLKCQSEKFIAFPSIRFEYFLVLLKHA
                     KFMVGNSSAGIREAPLYGVPSIDVGTRQSNRHMGKSIIHTDYETKNIFDAIQQACSLG
                     KFEADDTFNGGDTRTSTERFAEVINNPETWNVSAQKRFIDLNL"
     gene            9919..10605
                     /gene="neuA"
                     /locus_tag="WHR07_000574"
     CDS             9919..10605
                     /gene="neuA"
                     /locus_tag="WHR07_000574"
                     /EC_number="2.7.7.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acylneuraminate cytidylyltransferase"
                     /protein_id="HEZ2129822.1"
                     /translation="MEKQNIAVILARQNSKGLPLKNLRKMNGISLLGHTINAAISSKC
                     FDRIIVSTDGGLIAEEAKNFGVEVVLRPAELASDTASSISGVIHALETIGSNSGTVTL
                     LQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMEHHPLKTLLQINNGEYAPMRHLSD
                     LEQPRQQLPQAFRPNGAIYINDTASLIANNCFFIAPTKLYIMSHQDSIDIDTELDLQQ
                     AENILNHKES"
     gene            10606..11655
                     /gene="siaC"
                     /locus_tag="WHR07_000575"
     CDS             10606..11655
                     /gene="siaC"
                     /locus_tag="WHR07_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysialic acid capsule biosynthesis protein
                     SiaC"
                     /protein_id="HEZ2129823.1"
                     /translation="MQNNNEFKIGNRSVGYNHEPLIICEIGINHEGSLKTAFEMVDAA
                     YNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVES
                     KGMIFISTPFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSI
                     ESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTLD
                     NYACLGAVALGGSILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGGKKD
                     TIIAGEKPTKDFAFASVVADKDIKKGELLSGDNLWVKRPGNGDFSVNEYETLFGKVAA
                     CNIRKGAQIKKTDIE"
     gene            11735..13213
                     /locus_tag="WHR07_000576"
     CDS             11735..13213
                     /locus_tag="WHR07_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2,8-polysialyltransferase family protein"
                     /protein_id="HEZ2129824.1"
                     /translation="MLQKIRKALFHPKKFFQDSQWFATPLFSSFAPKSNLFIISTFAQ
                     LNQAHSLTKMQKLKNNLLVILYTTQNMKMPKLIQKSVDKELFSVTYMFELPRKPGIVS
                     PKKFLYIQRGYKKLLKTIQPAHLYVMSFAGHYSSLLSLAKKMNITTHLVEEGTATYAP
                     LLESFTYKPTKFEQRFVGNNLHQKGYFDKFDILHVAFPEYAKKNFNANEYHRFFAHSG
                     GISTSQSIAKIQDKYRISQNDYIFVSQRYPVSDEVYYKTIVETLNQMSLRIEGKIFIK
                     LHPKEMENKNIMSLFLNMVTINPRLVVINEPPFLIDPLIYLTTPKGIIGLTSTSIVYT
                     PLLSPTTQCLSIGQIVIDSIHHTAQQENTALIEEHLEIVKQFDFIKILSSIEDGIDTN
                     SFKTEETLEMLLKSAEYAYKNKNFYQAIFYWQLASNNDLSVLGYKSLWYYNALNKVKQ
                     NYKMKYLEINYIERISLYFNDKDKMIWQNIKNDFFKYSLCNQ"
     gene            13242..14624
                     /locus_tag="WHR07_000577"
     CDS             13242..14624
                     /locus_tag="WHR07_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129825.1"
                     /translation="MSINTFETFIYELYQSTNFAEIARITGFSNHKALNLETIRMMAI
                     SCFKTKNTTKCIELSEYFNEKSDIKDFFIFEILAECYFLQNDLVKSLENYEKALLLNP
                     KLISARFKHMCLKYRLFNELDSTTFSKYEIESQQKKKISNLRIIAYIQLKEKKYFKAY
                     NNLKLLIELNKSPFYPDYLSIIHAIENLEYSKQSQNTKKELTEYIKISKAIALKSEFV
                     CNGSNNLFVTLSPATGFVLKKYNYPADKLCFIDNTNTYYTFAYELIAEHIISLVKKYK
                     YENISIIGSSKGGTATIILLNLLQTALPNTTICAVSCSPQIQIFPFNKNLTIPSYQKF
                     AEYFSYNSILESKCAQAQKLINFDILYRNKLTIFYGDKFKMDAQEVSTIRPINNTTII
                     PLNYSGHGSLIPLTIPENKSFDELKQKYSKLEIDTDFQALGGNNLSSIVDEIFEIYSN
                     PDMRLHKFLC"
     gene            complement(14675..15631)
                     /locus_tag="WHR07_000578"
     CDS             complement(14675..15631)
                     /locus_tag="WHR07_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129826.1"
                     /translation="MHQYYDAVILSVGNGLLKRFFKQNAQLNIASRPLIITLFPGVVF
                     GDQASILSRMGADIVLYNNKHDFRIAETYKKQYKLSCQNILYGYPNFRHASKGCHGER
                     IYFIDQVKIPFKKEERIYTLKKLIALAEKYPEKEFTILLRVADKDITVHQDKHSYIEL
                     AKQFQLPSNLTIERKSTAQAFQEMGYCLSYSSTMLFEAECKGIPVGVVADLGFSKSYA
                     NQHFLGSGVLIYFDQIDFTSPKIANPGWLDCYATKKVITTDEFNKLLKQVVPLQHDYQ
                     EYLFAVNSIESTQTIFLRKFKKLIRDPKQFFYDSKWFRRRNS"
     gene            16012..17031
                     /gene="galE"
                     /locus_tag="WHR07_000579"
     CDS             16012..17031
                     /gene="galE"
                     /locus_tag="WHR07_000579"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEZ2129827.1"
                     /translation="MKKILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSINILPR
                     LKTITGQEIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYDNNV
                     SGSLVLAEEMARAGVFSIVFSSSATVYGDPGKVPYTEDMPLGDTTSPYGTSKSMVERI
                     LTDIQKADPRWSVILLRYFNPIGAHESGLIGEQPNGIPNNLLPYICQVASGRLPQLSV
                     FGGDYPTPDGTGMRDYIHVMDLAEGHVAAMQAKSNVAGTHLLNLGSGRASSVLEIIRA
                     FEAASGLTIPYEVKPRRAGDLACFYADPSYAKAQIGWQTQRDLTQMMEDSWRWVSNNP
                     NGYDD"
     gene            17147..>17577
                     /locus_tag="WHR07_000580"
     CDS             17147..>17577
                     /locus_tag="WHR07_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEZ2129828.1"
                     /translation="MRKILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESL
                     EPVSHHPRYAFEQVDICDRAALDRVFAQHQPDAVMHLAAESHVDRSIDGPAAFIETNI
                     VGTYTLLEAARAYWHDMPSEKKAAFRFHHISTDEVYGDLSGT"
BASE COUNT         5157 a         4016 c         3491 g         4913 t
ORIGIN      
        1 gtgccgccta aatcgccata gacttcatcg gtggaaatat ggtggaaacg gaaggcttcg
       61 tgctgttcag acggcatttg ttgccagtag gcgcgggctg cttcaagcag attgaatgtg
      121 ccgacgatat tggtttggat aaactcgcct gccgaaccga tagagcggtc gacatggctt
      181 tccgccgcca agtgcatcac ggcatcgggc cggtgttgtg cgaatacgcg gtcgagttcg
      241 gcgcggtcgc aaatgtccac ttgctcgaaa gcatagcggg gattatcggc aatgtcggtc
      301 agcgattcga gattgcccgc gtaggtcagt ttgtcgaggt tgacgacgga atcttgggtg
      361 tttcggataa tatgacggac aacggcagaa ccgataaagc ccgcaccgcc ggtaacgagg
      421 atggtttttt tgtttgcggt ttgcatttaa tccccatatc cgttggggtt gcggctgacc
      481 caacgccacg aatcttccat catttgctgc aagccgcgtt tggtttccca gccggtttgt
      541 tgtttggtat gggacgggtc ggcaaaggaa cacgccaaat caccggcgcg gcgcggtttg
      601 atttcaaatg gaatggttaa acccgaagcc gcttcaaatg cgcggatgat ttccaatacc
      661 gaagaagcgc ggccggagcc taagttcagc aaatgcgtgc ctgctacatt actttttgcc
      721 tgcatagccg cgacatggcc ttctgccaaa tccatcacat gaatatagtc acgcatcccc
      781 gtgccgtcgg gggtagggta gtcatcgcca aataccgcca attgcggcag tttgcctgcc
      841 gccacttggc agatataagg caacaaatta ttcgggatgc cgtttggctg ctcgccaatc
      901 aaaccacttt cgtgcgcccc aatcgggttg aaatagcgca acaaaatcac gctccaacgc
      961 ggatcggcct tttggatgtc ggttaacatc cgttccacca tcgctttgga tgcgccataa
     1021 ggattagcgg tatcgcccgg gcgcatatct tccgtatagg gcattttacg tatcatggcg
     1081 cgacgcatta aagtaaacgc caaagcgcgt ttatactggt tatccagttt ccctatattt
     1141 ttacgttaca aatcaagttg ttggtattca tcgtgaaaat agaatttttc ggcataacgc
     1201 tgactcataa aaccggcatg cgggctacct gaaaaaatca ttgcgccatc atcgtcattt
     1261 aatgtttcat ggttgttttc tattaatgct aaagcaattt ggtaattaat tgccaaaata
     1321 tcgttagtaa tcacacgata gccgcgtttt ttggcttcat aggcaaagga acagcctcca
     1381 ctaaatacat ctgcaactgt atctacatca gacggaagct ggtcacaaat ccaggaagct
     1441 attttctctt tattaccgat atagttaatt ttcggatatt gcttattcat tttcactcat
     1501 ttttaaaata ctttcagcaa tagcttttgc caataaaggc ggtacggcgt taccaacctg
     1561 ctgctgggca attttgctgc cgcaaaaaat aaaattatca gggaaagatt gtaaggcagc
     1621 taattcacga acggttaaag cccgattctg ttcatagtga aaaactttgc gcatatctcc
     1681 tgtaatacaa acggctggtt tgttgctgtt gtaacggatg tatttacgga tatcacctgt
     1741 tttcggacgt aatggttcag gaatatcgtt acggttacct ccatttttaa caaatgccat
     1801 tttttctaac atttgtgccg aatgattcat agcttcatga tttgcaacgt gtggattgct
     1861 ttcgccagca gccagttttg gaaaatgtcc tattgctgat ccaacagtct gatgggaaat
     1921 ctgcaaaggt tcgggaaagg aaattttgcc tttatccctc ctcccgataa atatcactcg
     1981 gctacgtatc tgaggaacac cgaaatcggc tgcactcagt atcttacatt ccaccgaata
     2041 accgatattc tgaaatgctt gaataatctc aatacgtgtt ttacctgaat tgtgtgtata
     2101 gagtcgcgct acattttcca taacaaaaaa atatggttgg acaattttaa ctattcggac
     2161 aaactcttta aataaatggt tgcgtgggtc atctgtaaat gtccgtccaa tctttcctgc
     2221 catactaaaa ccttgacaag gtggtcctcc aataatcaaa tcaactgctt gtccgttaag
     2281 acaattgatt aaatcttgtt cggttagtgt ggttaaatct ttttgcagta attgatgatg
     2341 ggggaagttg gtacggtaag tctgacaata atcagactcc atttcaacag aaagcaattg
     2401 ttggaatccg gcttgttcaa aacccaagga taggcctcct gctcctgaga aaaggtcaat
     2461 ataggtaagt ggtgtgtgca taagtcaaaa tccataaact cttcgattat tttaccgctt
     2521 cagcttcgca aacgcatccg ccatcgccga attggctggg gcgcggtcgt tgcgttgggg
     2581 tttgcggccg gctgtccgtt cgcggctgcg gttttcagac ggcattttat gttttgcgcc
     2641 gcccggttcg tcatccaagc gcatggtcag cgcgatgcgt ttgcgtgcag catcgacttc
     2701 cagcactttc actttcacca cgtcgccagc tttcaccact tcgcgcgggt cttggacgaa
     2761 cttgttggac agggcggaga tgtgcaccaa gccgtcctga tggacgccga tgtccacgaa
     2821 cgcgccgaag ttggcgacgt tggaaaccac gccttcgagt atcataccga cttgcaagtc
     2881 gctgatttcg tggatacctt cggcaaacga tgccgtctga aactcgccgc gcggatcacg
     2941 gccgggtttt tccagttcgg acaggatgtc caaaatggtc ggcaggccga agcgttcgtc
     3001 ggtgaagtcg gacgctttga tttgcttcac gcgctcgcgg ttgccgatga gttcggcggc
     3061 gctaatgcct tgttgcgcca gcattttggc gacgacggga taggcttcgg ggtggacggc
     3121 gctcgcgtcc aacggctctt taccgccgtt aatccgcaaa aagcctgccg cctgctcgaa
     3181 ggttttttcg cccaaacgcg gtactttcag caattttttg cggctgtcga acgcgccgtt
     3241 ttcatcgcgg taggcaacga tgttttgggc aagggtttga ttcaaaccgg aaattcgcgc
     3301 caagagcggg gcggaggcgg tgttcacgtc cacgccgacg gcgttcacgc agtcttcgac
     3361 caccgcgtcc agcgatttgg cgagctggct ttggttcacg tcgtgctgat actgccccac
     3421 gccgatggat ttggggtcga ttttgaccaa ctcggcaagc gggtcttgta gcctgcgggc
     3481 gatggacacc gcgccgcgca gggaaacgtc caagtcgggg aactcgcgcg ccgccagttc
     3541 ggacgcggaa taaatcgacg cgccggcttc ggacacgacg attttatgca gccccatttt
     3601 cgacatttca cgcaccagtt cgcccgcgat tttgtcggtt tcacggctgg cggtgccgtt
     3661 accgatggcg atgagcttca cgccgtgctg tttaatcagg cgcgacagcg ttgccaacat
     3721 attgttttct tgatgcaaat agacgatgac ggtatccagc agcttgccgg tgtcgtccac
     3781 cacggcgcat ttcacgccgt tgcggtagcc ggggtcgaga cccagcgtgg tcagccgtcc
     3841 ggcgggcgca gcaagcagca agtctttgag attgcgggcg aacacggtaa tcgcgtcggt
     3901 gtcggcggct tctttcaaac gattgagagc ttcaagttcc aacgacaaaa agattttcgc
     3961 gcgccaagtc aggcgcacgg tgtcgcgcag ccatttgtgg ccgtctgaaa ctttgaagcg
     4021 gcgggcgatg atttgctcgt attcgctttg ctgcgtaatc ggcgtgtcgt cgggctgata
     4081 tttgagcgcg atgttcaaca cgccttcatt gcgtccgcgc aaaaccgcta gcgcacgatg
     4141 gctgggcatc gcacgaatag gttcgcggtg gtcaaaataa tcgctgaatt tttcgccttc
     4201 ggtttctttg cctccaacaa cttgcgcgtg gatttcggct tcgttccaca gcttgtcgcg
     4261 cagcgtgccg atgagttccg cgtcttcggc aaactgctcc atcagaatcg cacgcgcgcc
     4321 gtccaacgcg gctttggcat cggggacgtt ttcgttcagg tagccttgtg cggcggcttc
     4381 cacgtcctgc gactgctcgg caagcaacac gtccgccagc ggctgcaaac cgtgttcgcg
     4441 cgcaatttgc gccttggtgc ggcgtttggg cttgtagggc agatacaggt cttccagcgc
     4501 ggttttgttg tcggcggctt cgatttgcgc gcggaggccg tctgaaagtt tgccttgctc
     4561 ttcaatgctt tttaacacaa cggctttgcg ctcttccaac tcgcgcaggt attgcagccg
     4621 ctcggcaagc cggcgcagct gcgtgtcgtc cagcccgccg gtggcttctt tacggtaacg
     4681 cgcgataaac ggcacggttg cgccgtcgtc taaaagctca atagcggcat tgatttgcgc
     4741 ggtagtcgcg gaaagttctt gggaaagaat ttgagtaatg ttcatcaata gaattccaac
     4801 ggacaggccg tctgaaattt cagacggcct gatttaaaaa acaatcgctt taaggcagcg
     4861 aattataata ttcgtaggct ttgtccatat cttcaaactg gtgcatatgc cctttttcca
     4921 gcaccatcgc attatcgcaa tattgcttca tggcgctgtg gctgtgcgac accaagatga
     4981 tggaacggtc tttgcgcttt tcaaacaact cgtacttaca tttatcggca aagcgcgagt
     5041 caccaactgc aatcacttcg tcaatcaaat agcaatcaaa ctctaccgcc aacgacaaag
     5101 caaatgccaa acgcgccttc atacctgaag aataacgctt gaccggctcg taaagatatt
     5161 gccccaactc ggaaaactct tcggtaaagt tcttcacata atcgatatcg acattgtaaa
     5221 tccggcagat gaaacgcaaa ttgtccatac cggtcagact accttgaaac gcaccggaga
     5281 atgccaaagg ccaagaaata ctcattgtcc gcttgatttc acccgtggtc ggcggctcga
     5341 caccactaat caaacggatc aacgtcgatt tacctgcacc gtttcgaccc aaaataccaa
     5401 ctttctcacc cttttgcagc gaaaaattga tatcgtctaa caccgtccgc ataccgccgc
     5461 gcatttgata ctgcttggaa acatgttcaa ccgaaatcat tgcggctcga ctcctttact
     5521 gaatttactg accatcgcca agccaaacaa caacaacacc agattgcaca atacgatata
     5581 ccaaggattt tcataggtaa ttacatcgct gccaaaatat ccggcacgga acatttctgt
     5641 gccatgcacc atcgggatca tcaatgcata ctcttgcact ttcggaggca aattatgtac
     5701 aaaaaagaat gcacccgata acggcatcat cacaaaagtc aatgtgcccc aaatcttgcc
     5761 aaacggctcg aaattaaagg caatcgaaca aatcaccaaa cccaaaccaa tcgcaaaaaa
     5821 agccatcaaa agccaagcca tcagcatata aaacatatct gccggcattt caatccagcc
     5881 aatcgcaatc aataccgcca taatcacaat ctgcgcaatg gttgcaccag caatttccaa
     5941 aatcatgcgc gccaagatgg tatccaaaac tcttacattg cggtgataaa gcaagctggc
     6001 atttgaagaa atcgacccaa ctgcccgttt tgaggcatta cgccacatca tcaacatcgg
     6061 atagccagta atcgcaaatg cgacaatatt caaagttgaa tatcggtctg cctttaaaaa
     6121 tttccacatc aagacgataa cgaatgtcat cagcaacggc tcaacaaaca gccataaaaa
     6181 gccaatatta ttgcgaccgt aacgggtgat aatttcccgc atcaaaagcg caccgattac
     6241 gcgcctttga atggctaaag attcccaaaa tgatgtttta tgcaaggctt tcatcagttt
     6301 ttatgctcac gaatgctggc agtcaacagg ctcaaaatac cataaaccat caagccgata
     6361 atcagagtgg caacaatgtt gtataaccgt ttaggctcat gtgccaaatc cggcaggctc
     6421 ggttgcgaga tcacttccaa ataaagctgc tgacggtctg cttcaacctt ggcactttcc
     6481 aaagaagtca tggcggctgc caactgctgc tctgccaact ggttttccaa atacacacgc
     6541 tgatattcgg cagcctgatt agacaacgaa gaatgcccac cgcccgaaat ggcacgtaac
     6601 tgttggtcaa tttctttacg caagctctgc tcacgcgcct gcaaacccgg aatctgcgga
     6661 ttctccggag tgactgcttt cacctgatcc agctgggttt gaatcacaat caattcatct
     6721 tgcagcttgg aaaccaaccc catttgcact tccgattgcg ctttcaaatc aaaaacgcca
     6781 ttggcaatcc ggtaatccgt cagattctga gaggcttcct ttacccgctc tgccgccgtt
     6841 ttcactactt cttccgcata gcgcaccgta tcagcacgtg cacgatcgtt caactggtta
     6901 atcaatgctt caccttgttt taacaaagcc tcattgattt tcttagattc cagcgcatca
     6961 aaggaagtta cattcaacgt ggaaataccc gaaaccgtat caaaattgat catcacctga
     7021 tttttatagt attgataaaa agcctcttcc tcgccacgga atccaaaacc attaaatcgg
     7081 ctaaatacat cgcccttagt ttcataaaat tcacgcaccg gcaagatttt acgcagttca
     7141 tccaaagacg agcgcgaacg catatactcc ccaaccgtgt aaatatcatc ttgcgcacgg
     7201 gcaaaacctg tgccctgcaa aatggcaccc aggccattga gagaagattg gcttttaggc
     7261 gagcgcacca caaagctcga ttgcgacgta aaacgatcgg aagcgaagaa gccgaaatac
     7321 accaacgaaa ttaccgtagg gataatcacc gttacccaaa ataaagggct tagcttttta
     7381 atccaacttt tctttttcgg ctttttacgc tcggctttgg tttcagtggc aactgccaca
     7441 ggaagttgct cagacatctt aattactcac attaattagt taaattatta atactgttcg
     7501 cgccactggt aaccggcgag aacacaaacg acaagaattt ctgcacttca gccaacggcg
     7561 cattcgacac atacaataca tctttattct tcacaggaaa gcgctgcata gaaaatagcg
     7621 aatgcgcatc agccatattc acacgatata ccgttggaat ctctgcctca ctgccataac
     7681 cttgagcaat ccatttatcc tgacgttctg ccggcaattc caccaatggc gtatagcgga
     7741 acacaaacac accacgcgca tcagaacggc gatcttgcaa accgcccata cggccaatgg
     7801 cttcagaaag cgataagcct ctggctgaaa aaccgatttc ttgtgttctc cccaccgcac
     7861 ccatagacgt aaaggtatag ggattggtaa tcatggtaac cacatcaccg cgacgcagca
     7921 aaatattttg tcgcggattt gcaactaaat cttccaaggc aacagttcgt actacattgc
     7981 cacgtgtcag ctgcacattc gtatcctgca catttgccgt tgaaccacct accgcagcca
     8041 ccgcatccaa cacacgctca ccggctgccg tcagcggcat acgcacacta ttcccagcac
     8101 gaatcaccga cacattcgcc gcattattct gcaccaaacg caccatcact tgtggctgat
     8161 tggccatttt tttcaggcgg cctttaataa tttcctgaac ctgaccaggc gttttaccga
     8221 ccaccgaaat atcgccaaca aacggcacag aaaccgtacc acgtgccgtg accaactgct
     8281 ctggcaactt agtttgatgc gcactacccg agcccatcga agaaaggcca ccaccaaaca
     8341 atactgccgg cggcgcttcc caaatcataa tatccaatac atcaccaata tttagcgtac
     8401 cagccgaagc ataaccatcg ccaaactgag tgaatgactg atttatctga gccttatata
     8461 ataactgagc aaccgtatga ttcacatcaa tcagctccac ttcaggaatt tgaacttcag
     8521 attgttgccc taaagagaca attttttttg cgctggggcc tgatgaagga atcgcagagc
     8581 atcctacaat taaacttcca cacaataata atactgcgtg acgaatataa aatttcactt
     8641 taaacacaag ccaaatccta atataattat aaatggccta attatagcac ttaatcgaaa
     8701 taaatttatg agtacgtaga gtataattag tattcttctt tccaacttcc ttatacttat
     8761 atacttatag attctaaaat catgaaaaga attctttgca ttacaggtac cagagccgac
     8821 ttcggcaagc taaaaccttt attagcctat attgaaaatc acccagacct tgaattgcat
     8881 ttgattgtaa ctggtatgca tatgatgaaa acatatggca gaacctgcaa ggaagtaact
     8941 cgagaaaact atcaacatac atatctgttt tcaaatcaaa tccaaggtga accaatgggt
     9001 gccgttttag gcaataccat tacgtttatc tctcgtctat ctgatgaaat tgaacctgat
     9061 atggtcatga ttcacggcga ccgtttagaa gcactagcag gcgcaactgt aggtgcatta
     9121 agcagccgtt tagtttgcca tatcgaaggt ggtgaactat ctggtacagt agatgactcc
     9181 attcgtcatt ctattagtaa actttctcat atccacttgg tagcaaatga acaagctgtc
     9241 actcgcctag tgcaaatggg agaaaaaaga aagcatattc acatcatcgg ctcccccgat
     9301 ttagatgtta tggcctcttc caccctccca tccttagaag aagtcaaaga atattacggt
     9361 ttaccatacg aaaattatgg tatttctatg tttcaccccg tgactacaga agcacattta
     9421 atgccacaat atgcggccca atatttcaaa gcattagaat taagtggcca aaatatcatt
     9481 agcatttacc ctaacaacga cacgggtact gaaagtattt tacaagagtt attaaaatgt
     9541 caatctgaaa aatttatcgc atttccatct atacgatttg aatacttttt agtcttattg
     9601 aaacatgcta aatttatggt cggcaactca agtgcaggta ttagagaagc tcctctctac
     9661 ggtgtccctt caattgatgt tggtacacgc caaagtaacc gccatatggg aaaatctatt
     9721 attcatacag attatgaaac taaaaatatc tttgatgcga ttcaacaagc atgcagttta
     9781 ggcaaatttg aagcagatga tacctttaat ggcggagata ctcgcaccag cacagaaaga
     9841 tttgctgaag taatcaacaa tcctgaaacg tggaatgttt ctgctcaaaa acgttttatc
     9901 gatttgaatc tttaaattat ggaaaaacaa aatattgcgg ttatacttgc gcgccaaaac
     9961 tccaaaggat tgccattaaa aaatctccgg aaaatgaatg gcatatcatt acttggtcat
    10021 acaattaatg ctgctatatc atcaaagtgt tttgaccgca taattgtttc gactgatggc
    10081 gggttaattg cagaagaagc taaaaatttc ggtgtcgaag tcgtcctacg ccctgcagag
    10141 ctggcctccg atacagccag ctctatttca ggtgtaatac atgctttaga aacaattggc
    10201 agtaattccg gcacagtaac cctattacaa ccaaccagtc cattacgcac aggggctcat
    10261 attcgtgaag ctttttctct atttgatgag aaaataaaag gatccgttgt ctctgcatgc
    10321 ccaatggagc atcatccact aaaaaccctg cttcaaatca ataatggcga atatgccccc
    10381 atgcgccatc taagcgattt ggagcagcct cgccaacaat tacctcaggc atttaggcct
    10441 aatggtgcaa tttacattaa tgatactgct tcactaattg caaataattg tttttttatc
    10501 gccccaacca aactttatat tatgtctcat caagactcta tcgatattga tactgagctt
    10561 gatttacaac aggcagaaaa cattcttaat cacaaggaaa gctaaatgca aaacaacaac
    10621 gaatttaaaa ttggtaatcg ttcagtaggt tacaaccacg aaccattgat tatctgtgaa
    10681 atcggcatca atcatgaagg ctctttaaaa acagcttttg aaatggttga tgctgcctat
    10741 aatgcaggcg ctgaagttgt taaacatcaa acacacatcg ttgaagacga aatgtctgat
    10801 gaggccaaac aagtcattcc aggcaatgca gatgtctcta tttatgaaat tatggaacgt
    10861 tgcgccctga atgaagaaga tgagattaaa ttaaaagaat acgtagagag taagggtatg
    10921 atttttatca gtactccttt ctctcgtgca gctgctttac gattacaacg tatggatatt
    10981 ccagcatata aaatcggctc tggcgaatgt aataactacc cattaattaa actggtggcc
    11041 tcttttggta agcctattat tctctctacc ggcatgaatt ctattgaaag catcaaaaag
    11101 tcggtagaaa ttattcgaga agcaggggta ccttatgctt tgcttcactg taccaacatc
    11161 tacccaaccc cttacgaaga tgttcgattg ggtggtatga acgatttatc tgaagccttt
    11221 ccagacgcaa tcattggcct gtctgaccat accttagata actatgcttg cttaggagca
    11281 gtagctttag gcggttcgat tttagagcgt cactttactg accgcatgga tcgcccaggt
    11341 ccggatattg tatgctctat gaatccggat acttttaaag agctcaagca aggcgctcat
    11401 gctttaaaat tggcacgcgg cggcaaaaaa gacacgatta tcgcgggaga aaagccaact
    11461 aaagatttcg cctttgcatc tgtcgtagca gataaagaca ttaaaaaagg agaactgttg
    11521 tccggagata acctatgggt taaacgccca ggcaatggag acttcagcgt caacgaatat
    11581 gaaacattat ttggtaaggt cgctgcttgc aatattcgca aaggtgctca aatcaaaaaa
    11641 actgatattg aataaaaatc tataaattga ctcaatttaa tgataatcgg ctgacttttc
    11701 agtcgattat cattaaaaat atacggaaaa acaaatgttg cagaaaataa gaaaagctct
    11761 cttccaccca aaaaaattct tccaagattc ccagtggttt gcaacacctt tatttagcag
    11821 cttcgcaccc aaaagcaatc tttttattat ttctacattt gcccaactta atcaagctca
    11881 tagtctgact aagatgcaaa aattaaaaaa taatttactg gttattttat ataccacaca
    11941 aaatatgaaa atgccgaaat taattcagaa atcagttgat aaagaattat tttcagtaac
    12001 ttacatgttt gaactcccaa gaaagccggg aatcgtttcc ccaaaaaaat tcctatatat
    12061 ccagcgtgga tataagaagc ttctcaaaac tatccaacct gcacaccttt atgttatgtc
    12121 ttttgctggg cattattcct ctctgctcag cttagcaaaa aaaatgaata tcacaacaca
    12181 tttagtagaa gagggaaccg caacctatgc cccactctta gaatcattta catacaaacc
    12241 cacaaaattt gagcaacgtt ttgtgggtaa caacttacat caaaaaggct attttgataa
    12301 atttgatatt ttgcatgtag ctttccctga gtatgcgaaa aaaaatttca atgctaatga
    12361 ataccaccgt ttttttgcac attcaggcgg gattagcaca agccaatcta ttgctaaaat
    12421 tcaagacaaa taccgcatat ctcaaaatga ctatattttt gtaagtcaac gctatcctgt
    12481 ttcagatgaa gtttattata aaactattgt cgaaacatta aatcaaatga gtttgcgaat
    12541 agaaggtaaa atttttatta aactccatcc taaagaaatg gagaataaaa atattatgtc
    12601 tttattcctg aatatggtaa caattaatcc ccgtctagta gtgattaatg aacccccttt
    12661 tctcattgac ccactaattt atttaacaac ccctaaagga attattggac tgacatcgac
    12721 ttctattgtt tatacacctt tactttcccc tactacccaa tgtctgtcaa ttgggcaaat
    12781 cgtgattgat tcgatacacc atacagccca acaagagaac accgctttaa ttgaagagca
    12841 tttagagatt gttaaacaat tcgattttat taaaatatta tcaagtatag aggatggtat
    12901 agacaccaat tcttttaaga cagaagaaac attagaaatg cttctaaaat cagctgaata
    12961 tgcatataaa aacaaaaact tttaccaagc aattttttat tggcaactgg ccagtaataa
    13021 tgatctatct gtattaggct ataaatcatt atggtattac aatgccctta ataaagttaa
    13081 gcagaattat aaaatgaaat atttagaaat taactacatt gaaagaattt ccttatattt
    13141 taatgataaa gataaaatga tttggcaaaa catcaaaaat gattttttta aatatagcct
    13201 ttgtaaccaa taaatatatt taagctggag tcttattcat catgtcaatc aatacgtttg
    13261 aaacctttat ttacgaatta taccaatcaa ctaatttcgc agaaattgct cgcattacgg
    13321 gatttagtaa ccataaagcg ctaaacttgg aaaccatccg aatgatggca attagctgct
    13381 ttaaaaccaa aaacaccaca aaatgcatcg agctaagtga atatttcaat gaaaaatcag
    13441 atattaaaga tttttttatt tttgaaattt tggctgaatg ctattttctg caaaatgacc
    13501 ttgttaaatc tttagagaac tatgagaaag cattattatt aaatccaaaa ctaatctcag
    13561 caagatttaa acatatgtgt ctcaaatata ggctttttaa tgaactagat agtactactt
    13621 tctcaaaata tgaaattgaa tctcaacaaa agaaaaagat ttcaaactta cgcattattg
    13681 cctatatcca attaaaagaa aaaaagtatt ttaaggcata taataacctg aaattactca
    13741 tagagctaaa caaatctcct ttctatcccg attatttatc aataatacac gctattgaaa
    13801 atttagagta ttctaaacaa tcccaaaata ctaaaaaaga actaacagaa tatatcaaaa
    13861 tttccaaagc aattgcacta aaatcagaat tcgtatgcaa cgggagtaac aatttatttg
    13921 ttactttatc acctgctaca ggtttcgttc ttaagaaata taattaccct gctgataaac
    13981 tatgctttat tgacaacaca aacacatatt atacttttgc ttatgaattg atcgcagagc
    14041 atattattag cttagttaaa aaatataaat atgaaaatat ttctattatt ggctcatcaa
    14101 aaggaggaac tgccacaatt atacttctaa atttattgca gactgcatta cctaatacta
    14161 caatatgcgc agtatcttgc tctcctcaaa tacagatttt tccattcaat aagaacctaa
    14221 ctattcctag ttatcaaaaa tttgcagaat atttctctta taactcaatt ctagaaagca
    14281 aatgtgctca agctcaaaag ttaataaatt ttgatattct ctatagaaat aaactaacta
    14341 ttttttatgg tgataaattt aaaatggacg cccaagaagt atctacaatt agacctataa
    14401 acaatactac tattattcct ttaaactatt caggacatgg ttctcttatc ccattaacaa
    14461 ttcctgaaaa taaaagtttt gacgaattaa agcagaaata ttctaaactt gaaatcgaca
    14521 ctgatttcca agccttaggt ggcaataacc tttcaagtat tgtggatgag atttttgaaa
    14581 tctattccaa tcctgatatg cgattacata aattcttatg ttaaatccaa tcaaaaaagc
    14641 gtgaaggaac catcttcacg cttttttttc aaactcaact atttcttctt ctaaaccatt
    14701 tagagtcata aaaaaattgc ttgggatctc taatgagctt tttaaacttc cgcaaaaaaa
    14761 tggtttgggt tgattctata ctgttcactg caaataaata ttcttggtaa tcatgttgca
    14821 atggcacaac ctgctttaat agcttattaa actcatcagt tgtaatcacc tttttagtag
    14881 catagcaatc aagccagccc ggatttgcta tttttgggga agtgaaatct atttgatcaa
    14941 aataaattaa aaccccacta cctaaaaaat gctgatttgc ataggattta gaaaagccta
    15001 agtctgcaac aacaccaaca gggataccct tacattcagc ttcaaaaagc atagtagatg
    15061 aataagataa acaatacccc atttcttgga aggcttgcgc ggtacttttt cgctctattg
    15121 tcaaattact cggcaactga aactgctttg ccagctctat atacgaatgt ttatcctgat
    15181 gcacagtaat atctttatct gcaaccctta gcaaaatagt aaattctttc tcagggtatt
    15241 tttcagccaa ggcaatcaat ttttttaatg tgtaaattct ttcttctttt ttaaatggaa
    15301 ttttgacttg gtcaataaaa taaattctct ctccatgaca acctttcgaa gcatggcgaa
    15361 aatttggata accataaagt atattttgac aacttaattt atattgtttt ttatatgtct
    15421 ctgcaattct aaaatcatgc ttattattat ataaaacaat atcagccccc atacgagata
    15481 gaatacttgc ctgatcaccg aatactacac ctggaaacaa ggtaataatc aatggccttg
    15541 aagcaatatt taattgcgca ttctgcttaa agaacctttt taacaaccca tttccaaccg
    15601 ataaaattac tgcgtcataa tattgatgca tattcttaat aaagtaatca tcaatatgaa
    15661 aaaaaattgc ttggtcttta tctatccctg attctaataa ctgtcgattt gaaagaatgt
    15721 tttctcgatt tttgtggata taaatatcaa tttgagcatc ttttatctct tttgcaacag
    15781 catagcccga gttaaggaac gagtcataac tggcaattag taatactttt ttcactattt
    15841 tcccttaatt ctacaccata tgaataaaat tatagtattt taccttagat atcaaatata
    15901 cttaaccaaa aaaatctgaa gaaatctact gctacttcag ggataattat ttcattaaga
    15961 ttttacaacc attattatca atctatcaaa gtatttttag tattttattc tatgaaaaaa
    16021 attctcgtta ccggcggcac cggttttatc ggctcgcata ccgttgtttc tttgctgaaa
    16081 agcggccatc aagtcgtgat tttggataac ctatgcaatt ccagcatcaa tatcctgcca
    16141 cgcttgaaaa cgattaccgg ccaagagatt ccgttttatc aaggcgatat ccgcgatcgt
    16201 gagattttgc gccgtatttt tgcggaaaac cgcattgatt cggtgattca ttttgccggc
    16261 ttgaaagcgg tgggtgaaag tgtggccgag ccgatgaaat attatgataa taatgtttcc
    16321 ggcagcttgg tgttggcgga agaaatggcg cgtgcgggcg tgtttagcat tgtgttcagt
    16381 tcttcggcga cggtttatgg cgatccgggc aaagtgcctt ataccgagga tatgccactg
    16441 ggcgatacca ccagccctta cggcacatcg aaatcaatgg ttgagcgcat tctcactgat
    16501 attcaaaaag ccgatccgcg ctggagcgtg attttgttgc gttatttcaa tccgattggc
    16561 gcgcacgaaa gtggtttgat tggcgagcag ccaaacggta tcccaaacaa tctgctgcct
    16621 tatatctgcc aagtggcttc gggcaggctg ccgcaactgt cagtattcgg cggcgattat
    16681 ccgacccccg acggtacggg aatgcgcgac tatattcatg tgatggattt ggcagaaggc
    16741 catgtcgcgg ctatgcaggc gaaaagcaat gtagcaggca cgcatttgtt gaacttaggt
    16801 tccggccgcg cttcttcggt attggaaatc atccgcgcat ttgaagcagc ttcgggtttg
    16861 acgattccgt atgaagtcaa accgcgccgt gccggtgatt tggcgtgctt ctatgccgac
    16921 ccttcctatg caaaggcgca aatcggctgg caaacccagc gtgatttaac ccaaatgatg
    16981 gaagactcat ggcgctgggt gagtaataat ccgaatggct acgacgatta agttgacctg
    17041 atacaggccg tctgaaagag atgttttcag acggcctctt tatctgaaaa acacacattc
    17101 tgtctgctat aatctgttta tattttttgg ctatcctctg aaatttatga gaaaaatcct
    17161 tgttaccggc ggcgcgggct ttatcggttc tgccgttgtc cgtcatatta tccgaaacac
    17221 ccaagattcc gtcgtcaacc tcgacaaact gacctacgcg ggcaatctgg aatcgctgga
    17281 acctgtgtcc catcatccgc gctatgcgtt tgagcaagtc gatatttgcg accgcgcagc
    17341 actggatcgt gtgtttgccc aacaccagcc ggatgcggtg atgcacttgg cagcagaaag
    17401 ccatgtcgac cgcagtattg atgggccggc ggcatttatc gaaaccaata ttgttggtac
    17461 ttacacgctt ttggaagcgg cgcgtgctta ttggcatgat atgccgtctg aaaaaaaagc
    17521 ggctttccgt ttccatcata tttcgactga tgaagtgtat ggcgatttaa gcggcac
//
LOCUS       DAWGKF010000024        17477 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.024, whole genome shotgun sequence.
ACCESSION   DAWGKF010000024 DAWGKF010000000
VERSION     DAWGKF010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17477)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17477)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17477
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.024"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(122..1447)
                     /locus_tag="WHR07_000581"
     CDS             complement(122..1447)
                     /locus_tag="WHR07_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HEZ2129829.1"
                     /translation="MKKYLFRAALCGIAAAILAACQSKSIQTFPQPDTSVINGPDRPV
                     GIPAPAGTTVAGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCA
                     QAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDRRTAQARFPIY
                     GIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGTHTADLSQFPITARTTAIK
                     GRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIR
                     IGYADKNEHPYVSIGKYMADKGYLKLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFF
                     RELTGSGNDGPVGALGTPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQ
                     DTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP"
     gene            1659..2498
                     /locus_tag="WHR07_000582"
     CDS             1659..2498
                     /locus_tag="WHR07_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family iron permease"
                     /protein_id="HEZ2129830.1"
                     /translation="MLVAFLIMLREGIEAALIVGIVAGFLKQSGHSKLMPKVWFGVVL
                     ASLMCLGLGYGIHSATGEIPQKQQEFVVGIIGLVAVAMLTYMILWMKKAARSMKRQLQ
                     DSVQAALNRGSGQGWALVGMAFLAVAREGLESVFFLLAVFKQSPTWQMPAGAVAGVLA
                     AAVIGALIYQGGMRLNLAKFFRWTGAFLIAVAAGLLAGSLRALHEAGIWNALQDIVFD
                     SSKYLHEDSPLGVLLGGFFGYTDHPTQGEALVWLLYLIPVITWFLCGSRPSETLTRKE
                     ELK"
     gene            2495..3661
                     /locus_tag="WHR07_000583"
     CDS             2495..3661
                     /locus_tag="WHR07_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake system protein EfeO"
                     /protein_id="HEZ2129831.1"
                     /translation="MRKFNLTALSVMLALGLTACQPPEAEKAAPAASGEAQTANEGGA
                     VSIAVNDNACEPMELTVPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDK
                     MTVTLLPGEYEMTCGLLTNPRGKLVVTDSGFKDTANEADLEKLSQPLADYKAYVQGEV
                     KELVAKTKTFTEAVKAGDIEKAKSLFADTRVHYERIEPIAELFSELDPVIDAREDDFK
                     DGAKDAGFTGFHRIEYALWVEKDVSGVKEIAAKLMTDVEALQKEIDALAFPPGKVVGG
                     ASELIEEVAGSKISGEEDRYSHTDLSDFQANVDGSKKIVDLFRPLIEAKNKALLEKTD
                     TNFKQVNEILAKYRTKDGFETYDKLGEADRKALQASINALAEDLAQLRGILGLK"
     gene            3925..5190
                     /gene="efeB"
                     /locus_tag="WHR07_000584"
     CDS             3925..5190
                     /gene="efeB"
                     /locus_tag="WHR07_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deferrochelatase/peroxidase EfeB"
                     /protein_id="HEZ2129832.1"
                     /translation="MSKKQPAQPTRRTLFKTAIAAGAVGAIGGYLGGKKQGETAERTA
                     ESQHSPQAYPCYGEHQAGIVTPQQAFSIMCAFDVTAQSAKQLENLFRTLTARIEFLTQ
                     GGEYQDGDDKLPPAGSGILGKAFNPDGLTVTVGVGSSLFDGRFGLKDKKPIHLQEMRD
                     FSNDKLQKSWCDGDLSLQICAFTPETCQAALRDIIKHTVQTAVIRWSIDGWQPKSEPG
                     AMAARNLLGFRDGTGNPKVSDPKTADEVLWTGVAANSLDEPEWAKNGSYQAVRLIRHF
                     VEFWDRTPLQEQTDIFGRRKYSGAPMDGKKEADQPDFAKDPEGNTTPKDSHIRLANPR
                     DPEFLKKHRLFRRAYSYSRGLASSGQLDVGLVFVCYQANLADGFIFVQNLLNGEPLEE
                     YISPFGGGYFFVLPGVEKGGFLGQGLLGV"
     gene            complement(5262..5591)
                     /locus_tag="WHR07_000585"
     CDS             complement(5262..5591)
                     /locus_tag="WHR07_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HEZ2129833.1"
                     /translation="MSLPPCPQCASEYTYEDGGQYICPECAHEWNETESAADLAAQVL
                     DANGAALQNGDTVILIKDLKVKGSSMVIKQGTKVKGIRLQEGDHNIGCKIDGSAMNLK
                     SEFVKKA"
     gene            complement(5668..7038)
                     /gene="glmU"
                     /locus_tag="WHR07_000586"
     CDS             complement(5668..7038)
                     /gene="glmU"
                     /locus_tag="WHR07_000586"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEZ2129834.1"
                     /translation="MPQNTLNIVILAAGKGTRMYSKMPKVLHRIGGKPMLGRVIDTAA
                     ALNPQNICVVIGHGKDQVLNAVKRDVVWVEQTEQLGTGHAVKTALPHLSAEGRTLVLY
                     GDVPLIDVKTLKTLLEAAGNEVGLLTDVPADPTGLGRIIRDGNGSVTAIVEEKDADAA
                     QKAVKEINTGILVLPNAKLENWLNSLSSNNAQGEYYLTDLIAKAVADGIKVHPVQVHT
                     SYLAAGVNNKLQLAELERIFQTEQAQELLKAGVTLSDPARFDLRGRLKHGQDVVIDVN
                     CIFEGEVEIGDNVEIGANCVIKNAKIGANSKIAPFSHLEDCEVGENNRIGPYARLRPQ
                     AKLAADVHIGNFVEIKNAAIGKGTKANHLTYIGDAEVGSKTNFGAGTIIANYDGVHKH
                     KTVIGNEVRIGSNCVLVAPVTLGNKVTTGAGSAITRNVEDGKLALARARQTVIEGWVR
                     PEKDKQ"
     gene            complement(7093..8070)
                     /locus_tag="WHR07_000587"
     CDS             complement(7093..8070)
                     /locus_tag="WHR07_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HEZ2129835.1"
                     /translation="MQENPTVWLFDLDNTLHNADAGIFTLINRAMTRYMARRLKLSES
                     AASDLRQDYWHRYGATLAGLQIHHPEIDIAEFLRESHPIDAILTRLHGMPETQNTLSR
                     LKGRKAVFSNGPSFYVRAVVNALGLENRFDALFGTDDFGLLYKPNPQAYLNVCRLLDV
                     PPECCIMVDDSADNLHQAKALGMKTVRFGAKSHALPFIDASVSDMAQLARYAETLSEH
                     RQNHYNTPYPPKIRKNVMRKTFLILMTAAALLSGCAWETYQDGNGKTAVRQKYPAGTP
                     VYYQDGSYSKNMNYNQYRPERHAVLPDQTDGSEQDVRGQNWQKPKFQNR"
     gene            8129..9130
                     /locus_tag="WHR07_000588"
     CDS             8129..9130
                     /locus_tag="WHR07_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ2129836.1"
                     /translation="MKRKIWLLPLLAVSAYLQAQTEVRLAVHKSFSLPKGLIARFERA
                     NDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPESAP
                     VAVGLPSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSP
                     GLGFLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAA
                     SPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREV
                     QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK"
     gene            9224..10072
                     /locus_tag="WHR07_000589"
     CDS             9224..10072
                     /locus_tag="WHR07_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEZ2129837.1"
                     /translation="MDFKQFDFLHLISVSGWEHLAEKAWAFGLNLAAALLIFLVGKWA
                     AKRIVAVMRAAMTRAQVDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGG
                     AGLAVALSLKDQLSNFAAGALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTTDN
                     EEVVLPNSVVMGNSIVNRSTLPLCRAQVIVGVDYNCDLKVAKEAVLKAAVEHPLSVQN
                     EERQAAAYITALGDNAIEITLWAWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRD
                     IHIINS"
     gene            10099..10584
                     /locus_tag="WHR07_000590"
     CDS             10099..10584
                     /locus_tag="WHR07_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HEZ2129838.1"
                     /translation="MDALHTIARNLTKKRQTVSCAESCTGGMLAAAFTSVAGSSQWFD
                     QSFVTYSNKAKEDRLGVLPETLLEHGAVSRQTVYEMARGAKAVAQADYAVGISGIAGP
                     GGGSESKPVGTVWFGFAFPGGSCEAMRRFDGNRESVRAQAVAFALERLAGLIENGGDA
                     V"
     gene            complement(10686..12254)
                     /gene="msrAB"
                     /locus_tag="WHR07_000591"
     CDS             complement(10686..12254)
                     /gene="msrAB"
                     /locus_tag="WHR07_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional peptide-methionine (S)-S-oxide
                     reductase MsrA/peptide-methionine (R)-S-oxide reductase
                     MsrB"
                     /protein_id="HEZ2129839.1"
                     /translation="MKHRTFFSLCAKFGCLLALGACSPKIVDAGAATVPHTLSTLKTA
                     DNRPASVYLKKDKPTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITVASPGFLH
                     EKKDGDFQKWYAGLNYPKLPVVTDNGGTIAQSLNISVYPSWALIGKDGDVQRIVKGSI
                     NEAQALALIRDPNADLGSLKHSFYKPDTQKKDSKIMNTRTIYLAGGCFWGLEAYFQRI
                     DGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVDP
                     TSLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQKYQLPLVVENEPLKNFYDAE
                     EYHQDYLIKNPNGYCHIDIRKADEPLPGKTKTAPQGKGFDAATYKKPSDAELKRTLTE
                     EQYQVTQNSATEYAFSHEYDHLFKPGIYVDVVSGEPLFSSADKYDSGCGWPSFTRPID
                     AKSVTEHDDFSYNMRRTEVRSHAADSHLGHVFPDGPRDKGGLRYCINGASLKFIPLEQ
                     MDAAGYGALKSKVK"
     gene            12400..13665
                     /gene="ftsY"
                     /locus_tag="WHR07_000592"
     CDS             12400..13665
                     /gene="ftsY"
                     /locus_tag="WHR07_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEZ2129840.1"
                     /translation="MFSFFRRKKKQETPAPEEAQVQETAAKAESEVTQIVENIKEEVE
                     SLTESVKGQVESAVETVSGAVEQVKETVAEMLSEAEEAAEKAAEQVEAAKEAVAETVG
                     EAVGQVQEAVATTEEHKLGWAARLKQGLTKSRDKMAKSLAGVFGGGQIDEDLYEELET
                     VLITSDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPET
                     KEPFVIMLAGINGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNN
                     VTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKA
                     MPDAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRP
                     VPVRYIGVGEGIDDLRPFDARAFVDALLD"
     gene            14751..15035
                     /locus_tag="WHR07_000593"
     CDS             14751..15035
                     /locus_tag="WHR07_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEZ2129841.1"
                     /translation="MQPAVYILASQRNGTLYIGVTSDLVQRIYQHREHLIEGFTSRYN
                     VTMLVWYELHPTMESAITREKQLKKWNRAWKLQLIEENNVSWQDLWFDII"
     gene            15612..>17477
                     /locus_tag="WHR07_000594"
     CDS             15612..>17477
                     /locus_tag="WHR07_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly/adherence protein PilC"
                     /protein_id="HEZ2129842.1"
                     /translation="MNNQKLPEVKWGNDYSSLTDKSNEREVTHTSKFVVAKKHISFSF
                     NNTDEVVAEKKDAVVFGAATYLPPYGKVSGFDTAKLAERKNALDQIGTTHPGLIGYNY
                     QDVTCASGNCPELSYRTQFTFNNGLKRNGNGGRLDIYEDKSRDSSPIYKLKDYPWLGV
                     SFNLGGESSFKPKRQGSLVSSFSEDVTQQNGTQDQYKSKNLVYTTDDYNSKGNKNHQD
                     KHHAVAFYLNAKLHLLDKKQIKNIAQGVTVDLGTLKTRIEPTDAWKNRQGSYFNNSTW
                     TYEEKGSVSVKLKLPEVKAGRCVNANNPNKSTKAPSPALTAPALWFGPVQNGKVQMYS
                     ASVSTYPDSSSSRIFLQNLERKTDPGRPGRYSLKPLNEAQIKSKEPSFTSRQTIIRLD
                     GGVQQIKLDRNNTEVTGFNGNTNNDTFGIVKDLGVDPDTNEWKKVLLPWTVRVSNDDG
                     RFNTVNKEKNNGKPKYSQKYRSRDNGKHERNLGDIVNSPIVAVGGYLATAANDGMVHI
                     FKKGNGVDERNYSLKLSYIPGTMPRKDIQNTESTLAKELRTFAEKGYVGDRYGVDGGF
                     VLRQVERDGKTRVFMFGAMGFGGRGAYALDLTKADDNDPTKASLFDVKDNGNNGNN"
BASE COUNT         4034 a         4344 c         5089 g         4010 t
ORIGIN      
        1 aatttgatcc actataattc cgtcaaataa gaaaggaatt ttgtgcctgc ggtatcgcaa
       61 aacttcgcct taatgcgccc gattgcctag ggatgggctt cagacggcat tgttttccgg
      121 tttacgggcg gtattcgggc ttcataccgt tgggcagaag ctgccagaca tatcccgtgg
      181 ttttctgttt gccggcaagt tcgccggctt cgtcgccgta accccaaaaa taatccacgc
      241 gcaccgcgcc tttaatcgcg ctgccggtat cctgcgccat aatcaggcgg ttgagggctt
      301 tgcgggtaac cggatgggcg gtggcgacaa ataagggcgc acccaaggta atgtagtgcc
      361 ggtcgactgc gccggcatat tcccccatca gcggcgtgcc cagtgcgccg acagggccgt
      421 cattgccgct tccggtaagc tcgcggaaaa agatatagct ggggttttga cccaaaactt
      481 cggcgaggcg ttgcggattt tgccgcatat aagacttaat gccctgcatg gaggtttgtc
      541 cgagtttgag gtagccctta tccgccatgt attttccgat ggaaacatac ggatgctcgt
      601 ttttgtcggc atagccgatg cggatgtatt tgccggacgg ggttttcaga cggcccgagc
      661 cttggatgtg cataaaaaaa agttcgacag ggtcttcggc gtaaccgagt atcggtgctt
      721 tgccgtcaag cgcgccgccg ttgatttggt tgcgcgtgtg gtaggggagg aagcggcttc
      781 cttcaaacct gcctttgatt gccgttgtgc gcgcagtgat ggggaattgg gagaggtcgg
      841 cggtatgtgt gccgccggta ttgtcgattg tgccgctgtt ttttcctgtc tgcctgatgc
      901 ggacaagggc ttttccgctc cgcaaaccgg caggcagggg gacggagata aaatcgtcgg
      961 gaataccgta aatcgggaag cgggcttgtg ccgtccgcct gtcgtcgccc ttcagcaccg
     1021 gctcgtaata gccggtaacc gtgccggcaa ggcttccgtt gcctgcaacc tgccacggcg
     1081 tgaaatagcg ttcaaaaaac tgttttgcct gaaaggaatg gacgggggtt tgaaaggctt
     1141 gggcacacac atcctgccag ccttggcggt ttttcaaatt ggcgcagccg aggcggaagg
     1201 attgcaggct tttggcgaaa tcctgcgccg cccagtgggg cagggacagg tgcggcacaa
     1261 cggtataaac ggccccgccg ccggcaaccg tcgttccggc gggggcgggg ataccgaccg
     1321 gccggtccgg gccgttgatg acggatgtgt cgggttgcgg aaaggtttgg atgctcttgc
     1381 tttggcaggc ggcgaggatg gcggcggcga tgccgcacag ggcggcgcgg aacaggtatt
     1441 ttttcataat ggacaatgtt gtcagcagta ataaaaaaag atggtttcgg gcggcgttgc
     1501 agcagccgtg gagaggggat tttaacacag ggcgcagctg cagcctgcgg aactttccgc
     1561 cgcgcggtac tgcagataaa aataacttgc atttgtattt acaagcaatg aaaatattcc
     1621 gataatatat tattcatcat ccttgttcgt tcgcgtttat gctggtcgct tttttaatta
     1681 tgttgcgcga gggtatcgaa gccgcgctca ttgtcggcat cgttgccggt tttctgaaac
     1741 agtccggaca ttccaaactg atgcctaagg tctggttcgg ggttgttctt gcttctttga
     1801 tgtgtttggg gctggggtac ggcatccatt cggcaacagg cgagattccc cagaagcagc
     1861 aggagtttgt cgtcggcatc atcggtttgg ttgccgttgc catgctgact tatatgattt
     1921 tatggatgaa aaaggcggcg cgttcgatga agcggcagct tcaggattct gtgcaggcgg
     1981 ctttgaaccg tggcagcggt caaggatggg ccttggtcgg tatggcgttt cttgccgtgg
     2041 cgcgcgaagg tctggagagc gtttttttcc tgcttgccgt attcaaacag agcccgacgt
     2101 ggcagatgcc ggccggtgcg gtagcggggg ttttggctgc cgccgtgatt ggcgcgttga
     2161 tttatcaggg cgggatgcgc ctgaatctgg cgaagttttt ccgttggacg ggggcgtttt
     2221 tgattgccgt tgccgccggt ctgcttgccg gctcgctgcg cgcgctgcat gaggcaggta
     2281 tttggaacgc gcttcaggac attgtgttcg actcatcaaa atatttgcac gaagacagcc
     2341 cgttgggcgt gctgctcggc ggatttttcg gctataccga ccatccgacg cagggcgagg
     2401 ccttggtttg gctgctgtac cttattcccg tcataacttg gtttttgtgc ggcagcaggc
     2461 cgtctgaaac tttaacccgt aaagaggagc tgaaatgaga aaattcaatt tgaccgcatt
     2521 gtccgtgatg cttgccttag gtttgaccgc gtgccagccg ccggaggcgg agaaagctgc
     2581 gccggcagcg tccggtgagg cgcaaaccgc caacgagggc ggtgcggtca gtatcgccgt
     2641 caacgacaat gcctgcgaac cgatggaact gaccgtgccg agcggacagg ttgtgttcaa
     2701 tattaaaaac aacagcggcc gcaagctcga atgggaaatc ctgaaaggcg tgatggtggt
     2761 ggacgagcgc gaaaacatcg cccccggact ttccgataaa atgaccgtca ccctgttgcc
     2821 gggcgaatac gaaatgactt gcggtctttt gaccaatccg cgcggcaagc tggtggtaac
     2881 cgacagcggc tttaaagaca ccgccaacga agcggatttg gaaaaactgt cccaaccgct
     2941 cgccgactat aaagcctacg ttcaaggcga ggttaaagag ctggtggcga aaaccaaaac
     3001 ctttaccgaa gccgtcaaag caggcgacat tgaaaaggcg aaatccctgt ttgccgacac
     3061 ccgcgtccat tacgaacgca tcgaaccgat tgccgagctt ttcagcgaac tcgaccccgt
     3121 catcgatgcg cgtgaagacg acttcaaaga cggcgcgaaa gatgccggat ttaccggctt
     3181 tcaccgtatc gaatacgccc tttgggtgga aaaagacgtg tccggcgtga aggaaattgc
     3241 agcgaaactg atgaccgatg tcgaagccct gcaaaaagaa atcgacgcat tggcgtttcc
     3301 tccgggcaag gtggtcggcg gcgcatccga actgattgaa gaagtggcgg gcagtaaaat
     3361 cagcggcgaa gaagaccggt acagccacac cgatttgagc gatttccaag ccaatgtgga
     3421 cggttcgaaa aaaatcgtcg atttgttccg tccgctgatc gaggctaaaa acaaagcctt
     3481 gttggaaaaa accgatacca acttcaaaca ggtcaacgaa attctggcga aataccggac
     3541 taaagacggt tttgaaacct acgacaagct gggcgaagcc gaccgcaaag cgttacaggc
     3601 ctctattaac gcgcttgccg aagaccttgc ccaacttcgc ggcatactcg gcttgaaata
     3661 agccgcaagc gttcagacgg tatttggcgg cagatgccgt ctgaagtttt atagtggatt
     3721 aacaaaaacc agtacggcat tgcctcgcct tgccttgccg tactatttat actgtctgcg
     3781 gcttcgtcgc cttgtcctga tttttgttaa tccactatat ccgccatata ttgcagggcg
     3841 ggatttcaac ctgccgctat cggttaatgg aaaaacggcg tgcagggata cccatcctgc
     3901 tgcacggata ttgaaggaaa caccatgagc aaaaaacaac ccgcacaacc gaccaggcgc
     3961 actcttttta aaaccgcgat cgcagccgga gcagtcggcg caatcggagg ttatctcggc
     4021 ggcaaaaaac agggcgaaac cgccgaacgc accgccgaaa gccaacactc gccccaagcc
     4081 tatccctgct acggcgaaca tcaggcaggc atcgttacgc cgcagcaggc gttttcgatt
     4141 atgtgcgcct tcgacgtaac cgcgcaaagt gccaagcagc tggaaaacct gttccgcacg
     4201 ctgaccgccc gcatcgagtt tctcacccaa ggcggcgaat accaagacgg cgacgacaaa
     4261 cttccgccag ccggcagcgg cattttgggc aaagccttca accccgacgg gttgaccgtt
     4321 accgtggggg tgggcagcag cctgtttgac ggccggttcg gactcaaaga caaaaaaccg
     4381 attcatttgc aggaaatgcg cgacttctcc aacgataagc tgcaaaaaag ctggtgcgac
     4441 ggcgatttga gcctacaaat ctgtgccttt acccccgaaa cctgccaagc cgccctgcgc
     4501 gacatcatca aacacaccgt ccaaaccgcc gttatccgtt ggagtatcga cgggtggcag
     4561 cccaaatccg aacccggcgc gatggcggcg cgcaacctgt tgggcttcag ggacggcacg
     4621 ggcaacccca aagtttccga ccccaaaacc gccgacgagg ttttgtggac gggtgtggcc
     4681 gccaacagcc tcgacgaacc ggagtgggcg aaaaacggca gctatcaggc agtccgcctt
     4741 atccgccact ttgtcgagtt ttgggacagg acgccgcttc aagagcaaac cgacattttc
     4801 gggcggcgca aatacagcgg tgcgccgatg gacggcaaaa aagaagccga ccaaccggat
     4861 tttgccaaag accccgaggg gaataccacg cccaaagaca gccatatacg cctggcgaat
     4921 ccgcgcgatc ccgaattcct caaaaaacac cgcctcttcc gccgcgccta cagctattcg
     4981 cgcggactcg cctcaagcgg acagcttgat gtcggactgg tgttcgtctg ctatcaggca
     5041 aaccttgccg acggattcat cttcgtgcaa aacctcctca acggcgaacc gctggaagaa
     5101 tacatcagcc ccttcggcgg cggctatttc ttcgtcttgc ccggcgtgga aaaaggcggc
     5161 tttttggggc aagggctgct gggcgtataa atccgccata taaaaaacgc cgtccgaacc
     5221 ttgccaaacg ggttcggacg gcgtttcttg tttttgggcg gtcaggcttt tttgacgaat
     5281 tcggatttta aattcatcgc gctgccgtcg attttgcagc cgatgttgtg atcgccttcc
     5341 tgcaggcgta tgcctttgac ttttgtacct tgtttgatca ccatcgagct gccttttacc
     5401 ttgaggtctt tgatgaggat gacggtatcg ccgttttgca gtgccgcgcc gttggcatcg
     5461 agcacttgag ccgcaaggtc ggcggcggat tcggtttcat tccattcgtg ggcgcattcg
     5521 gggcagatgt attgtccgcc gtcttcatag gtgtattcgg aggcgcattg tgggcatggg
     5581 ggtaatgaca tggtttgcag tccttatctg atatcggagg ggtttgatgc cgtctgaaac
     5641 ctgaaaccgg cttcagacgg catggcttta ttgtttgtct ttttccggcc tcacccagcc
     5701 ttcgatgacg gtttggcggg cgcgggcgag ggcgagtttg ccgtcttcga cgttgcgggt
     5761 aatcgcgctg cctgcgcctg tggttacttt gttgccgagg gtaacggggg caaccagtac
     5821 gcagtttgaa ccgatgcgca cttcgttgcc gatgacggtt ttgtgtttgt gcacgccgtc
     5881 gtagttggca ataatcgtac ctgcgccgaa gttggttttg ctgccgactt cggcatcacc
     5941 aatgtaggtg aggtggttgg ctttggtgcc tttgccgatg gcggcgtttt tgatttcgac
     6001 gaagttgccg atgtgtacgt cggcggctag tttggcttgc ggacgcaaac gggcgtacgg
     6061 gccgattcgg ttgttttcgc cgacttcgca gtcttcgagg tgggagaagg gggcgatttt
     6121 gctgtttgcg ccgattttgg cgtttttgat gacgcagttt gcgccgattt cgacgttgtc
     6181 gccgatttcg acttcgcctt caaagataca gttcacatca attacgacat cttgtccgtg
     6241 tttcagacgg cctcgtaaat cgaaacgtgc cgggtcgctc agggtaacgc ctgctttgag
     6301 caattcttga gcctgttcgg tttggaaaat acgctcgagt tcggcgagct ggagtttgtt
     6361 gttcacgccg gcggcgaggt aggaggtgtg cacttggacg ggatgaactt taataccgtc
     6421 ggcaacggct ttggcgatga ggtcggtcag atagtattcg ccttgggcat tgttgctgga
     6481 gaggctgttc agccagtttt ccagtttggc gttgggcaga accaaaatgc cggtattgat
     6541 ttcttttacg gctttttggg cggcgtcggc gtctttttct tcgacgatgg cggttacgct
     6601 gccgttgccg tcgcggatga tgcggcccaa gcctgtcggg tcggcgggaa cgtcggtcaa
     6661 cagaccgact tcgttgccgg cggcttcgag cagggttttg agggttttaa cgtcaatcag
     6721 gggaacgtcg ccgtacagta ccagcgtgcg gccttcggcg gaaaggtggg gcagggcggt
     6781 tttgacggcg tggccggtac cgagctgttc ggtttgttca acccaaacga catcgcgttt
     6841 gacagcgttt aaaacttggt ctttgccgtg cccgatgacg acgcagatgt tttgcggatt
     6901 cagcgcggcg gcggtgtcga taacgcgccc gagcatgggc ttgccgccga tgcggtgcag
     6961 cactttgggc attttggaat acatgcgcgt gcctttgccg gcggcgagga taacgatgtt
     7021 taaagtgttt tgcggcatga cggtttcctg tgcaatgccg tctgaagcag cttcagacgg
     7081 catagggtag gtttatcggt tttgaaattt gggcttttgc cagttctgtc cgcgtacgtc
     7141 ttgttcggaa ccgtcggttt ggtcgggcag cacggcatgg cgttcggggc ggtattggtt
     7201 gtagttcata tttttcgagt agctgccgtc ttggtaataa acgggcgtgc cggcgggata
     7261 tttttgacgg acggcggtct tgccgttgcc gtcttgataa gtttcccacg cgcagcccga
     7321 caaaagggcg gcggcagtca tcaggataag gaaggtttta cgcataacat tctttcgtat
     7381 tttcgggggg tagggggtat tgtaatgatt ttggcggtgt tctgacaaag tttctgcata
     7441 ccgagccagt tgcgccatat cgcttacgga ggcatcgata aagggcagcg cgtgggattt
     7501 tgcaccgaac cggacggttt tcatacccag cgcctttgcc tgatgcaggt tgtccgcgct
     7561 gtcgtccacc ataatgcagc attcgggcgg tacgtccaac aggcggcaga cattgagata
     7621 cgcttgcgga ttgggtttgt acagcagccc gaaatcatcc gtgccgaaaa gcgcgtcgaa
     7681 acggttttcc aaaccgagtg cgttgacaac ggcacggacg taaaacgacg ggccgttgga
     7741 aaaaaccgcc ttgcgccctt ttaggcggct cagggtgttt tgtgtttcag gcatgccgtg
     7801 cagcctggtc aggattgcat cgatcggatg gctttcgcgc aaaaattcgg cgatgtcgat
     7861 ttcgggatgg tggatttgca gtccggcgag cgttgcgccg tagcggtgcc aatagtcttg
     7921 acgcaggtcg gacgcggcag attcggagag tttgaggcgg cgtgccatat agcgtgtcat
     7981 ggcgcggttg atgagtgtga agatgccggc atcggcattg tgcagcgtgt tgtcgaggtc
     8041 gaacagccac acggtcgggt tttcttgcat gttgaaccgt gaaaatttgt tagaatgtta
     8101 ttttacagcg aatagaggag gactcggaat gaaacggaaa atttggctgc tgccgctgct
     8161 ggcggtttcg gcatacctgc aggcgcagac ggaagtcagg ctggcggtgc ataagtcgtt
     8221 cagcctgccc aaagggctga ttgcgcgctt cgagcgggca aacgatgcga aggtgtcgat
     8281 tattcaggcg ggcggcgcga acgaaatgct caacaaactg attttgagcc gcgccaaccc
     8341 gattgccgac gcggtgtacg gtttggacaa cgccaatatc ggcaaggcgc gggaaatggg
     8401 cattttggcg gcagcgcaac ccgaatccgc ccccgtcgcg gtcgggctgc cttcggcttt
     8461 ggcggtcgat tacggctatg tgtccatcaa ttacgacaaa aaatggtttg aaggcaaaaa
     8521 gctgcccctg ccgcaaaccc tgcaggattt gacccgcccc gaatataaaa acctattggt
     8581 cgtgccgtct cccgccacgt cgtccccggg gctgggcttc ctgatggcga acatcagcgg
     8641 tctgggcgaa gaaggcgcgt tcaaatggtg ggcacagatg cggcagaacg gcgtgaaggt
     8701 cgccaaaggc tggagcgagg cgtattacac cgacttttcg cacaacggcg gcgcgtatcc
     8761 gctggtggtc ggttatgccg ccagcccggc ggcggaagtg tatttttcca aaggcaaata
     8821 cagcgagccg ccgacgggca acctgttttt aaaaggcggc gtattccgcc aggtcgaagg
     8881 cgcggcggtc ttgaagggcg cgaaacagcc ggaattggcg gcaaaactgg tgcaatggct
     8941 gcaaagtcgg gaagtgcagc aggcggttcc gtccgaaatg tgggtttacc ccgccgtcaa
     9001 aaacacgcgc ctgcccgacg tgttccgctt cgcccaagcc ccgacgcaca ccaccgcccc
     9061 cgcgcagcgc gatattgatg cgaaccagcg cggatgggtt tcccgttgga ttagaacggt
     9121 tttgaaataa aacaaacata ccgccccgca gggcttcata cggcattttt acacctgtgc
     9181 cgattacgcc gcacggggcg gatgttcgat caagaggaaa acaatggact tcaaacaatt
     9241 tgatttttta cacctgatca gtgtttccgg ttgggagcat ctggctgaaa aggcgtgggc
     9301 gttcgggctg aaccttgccg ccgcgctgct tatttttttg gtcggaaaat gggcggcgaa
     9361 acgcattgtc gctgtgatga gggcggcgat gacgcgcgcg caggtcgatg ccacgctgat
     9421 tagttttttg tgtaatgttg ccaatatcgg cttattgatt ttggtgatta ttgccgcatt
     9481 gggcagattg ggcgtttcca caacatccgt aaccgcctta atcggcggcg cgggtttggc
     9541 ggtggcgttg tccttgaaag accagctgtc caattttgcc gccggtgcgc tgattatcct
     9601 gttccgcccg ttcaaagtcg gcgattttat ccgcgtcggc ggttttgaag gatatgtccg
     9661 agagattaaa atggtgcaga cttctttgcg gacgaccgac aacgaagaag tcgtgctgcc
     9721 caacagcgtg gtgatgggca acagcatcgt caaccgttcc accctgccgc tttgccgcgc
     9781 ccaagtgata gtcggcgtcg attacaactg cgatttgaaa gtggcgaaag aggcggtgtt
     9841 gaaagccgcc gtcgaacacc ccttgagcgt tcaaaacgaa gagcggcagg ccgccgccta
     9901 catcaccgcc ttgggcgaca atgccatcga aatcacatta tgggcttggg caaacgaagc
     9961 agaccgctgg acgctgcaat gcgatttgaa cgaacaagtg gtcgaaaacc tccgcaaagt
    10021 caatatcaac atcccgttcc cgcaacgcga catacacatc atcaattctt aaacgccgtc
    10081 tgaaagggga gtgggaaaat ggacgcgctg cacaccatcg cccgaaacct gacgaaaaaa
    10141 cgtcaaaccg taagctgtgc cgagtcctgt acgggcggaa tgcttgccgc cgcattcaca
    10201 agcgttgcag gcagttcgca atggttcgac cagagttttg taacatacag caacaaagcc
    10261 aaagaagacc gcttgggcgt gttgcccgaa accctgctcg aacacggcgc ggtcagccgc
    10321 caaaccgtct atgagatggc gcgcggcgcg aaagccgtgg cgcaggcgga ttacgccgtc
    10381 ggtatttccg gcatcgccgg accgggcggc ggcagcgaaa gcaaacccgt cggcacggtt
    10441 tggttcgggt ttgcctttcc gggcggaagt tgcgaagcaa tgcgccgttt tgacggcaac
    10501 cgcgaatccg tccgcgcgca ggcggtcgcc ttcgcgttgg aacggttggc ggggctgatt
    10561 gaaaacggcg gcgatgctgt ctaaacaaaa tctccgtctg gacagaatcc ccgccggata
    10621 aaaaataccg tctgaaacgt tgcaggtttc agacggtatt ttgtcgggtt aggcggcggt
    10681 gcggcttatt tcactttact cttcaacgcg ccgtagcctg ccgcgtccat ttgttccagc
    10741 gggatgaatt tcaagctcgc gccgttgatg cagtagcgca gtccgccttt gtcgcgcggg
    10801 ccgtcgggga agacgtgtcc caaatgcgaa tcggcggcgt ggctgcgcac ttcggtgcgg
    10861 cgcatgttgt agctgaaatc atcgtgttcg gtaacggatt ttgcatcaat cgggcgcgtg
    10921 aagctcggcc agccgcagcc ggaatcatat ttgtcggcgg agctgaacaa aggttcgccg
    10981 ctgacaacgt ccacataaat gccgggtttg aacaaatggt cgtattcgtg gctgaaggca
    11041 tattcggtcg cgctgttttg ggtcacttgg tattgctctt cggtcagggt gcgtttgagt
    11101 tcggcgtcac tcggtttttt atacgttgcc gcgtcgaagc ctttgccttg cggggcggtc
    11161 ttggttttgc ccggcagcgg ttcgtcggct ttgcggatat cgatgtggca gtagccgttg
    11221 gggtttttaa tcaggtagtc ctgatggtat tcctcggcat cgtagaagtt tttcagcggc
    11281 tcgttttcaa caacgagggg cagttggtat ttttgctgct cgcgtttgag ggcggcggcg
    11341 atgacggctt tttcggcggg gtcggtgtag tacacgccgc tgcggtattg cgtaccggtg
    11401 tcgttgccct gtttgttgag gctggtcgga tcaacgacgc ggaagaaata ttgcaggatg
    11461 tcgtctaggc tgagtttgtc ggcatcgtag gtcactttaa cggtttcggc gtggcccgta
    11521 tggcggtagg acacgtcttc atagctcgga tttttcgtgt tgccgttggc gtagccggat
    11581 accgcgtcaa ccacgccgtc gatgcgttgg aaataggctt ccaagcccca gaagcagccg
    11641 ccggcgaggt aaatggtgcg tgtgttcatg atttttgaat cctttttctg agtgtcgggt
    11701 ttgtagaacg aatgtttcaa actgcccaaa tcggcattcg ggtcgcggat taacgccaac
    11761 gcctgcgctt cgttgatgct gcctttgacg atgcgctgca cgtcgccgtc tttaccgatt
    11821 aacgcccacg aagggtaaac gctgatattc aggctttggg cgatcgtgcc gccgttgtcg
    11881 gttacgacgg gcagcttggg ataattcaaa ccggcatacc atttttggaa gtcgccgtct
    11941 tttttctcgt gcaaaaagcc cggagacgcg acggtaatca ggttggcgga gctgaatttt
    12001 gcatcttgcg cccatttttc ggtctgtccc aattcggaca gacacaaagg acaccagctt
    12061 gcccaaaatt taatcagcgt cggtttgtct tttttcaagt aaacactggc ggggcggttg
    12121 tctgcggttt tcaaagtgga taaagtgtgc ggcacggtcg cggctccggc atcgacgatt
    12181 ttgggcgaac aagcacccag cgcaagcagg cagccgaact tggcgcaaag ggaaaagaaa
    12241 gtacggtgtt tcattttaat gtttcctgtg tggacggttt gcatgattag acgtttgaga
    12301 tgccgaaacc ttacagctcg gattttcaga cagccttgcc gcgtaaaata cgctacaata
    12361 caccctattt caagtttcta aaattaaaag gaaaattcaa tgttcagctt cttccgtcgc
    12421 aagaaaaaac aggaaacgcc ggctcccgag gaggctcaag ttcaggaaac tgcagcaaaa
    12481 gcagaatccg aagttactca aatagttgaa aatattaaag aagaagtcga atctttaacg
    12541 gaaagcgtca aagggcaggt cgaatcggct gttgaaaccg tcagcggtgc ggttgaacag
    12601 gtaaaggaaa ccgttgccga gatgctgtct gaagcagagg aagcggcgga aaaagcagcg
    12661 gaacaagtcg aagcggcaaa agaagccgtt gccgaaaccg tcggcgaggc tgtcgggcaa
    12721 gttcaagaag ccgttgcgac aactgaagaa cacaagctcg gttgggcggc gcgtttgaaa
    12781 caaggtttga ccaaatcgcg cgacaaaatg gcgaaatcgc tggcgggcgt gttcggcggc
    12841 ggacaaatcg acgaagattt gtacgaagag ctggaaaccg tgctgattac cagcgatatg
    12901 ggcatggaag ccaccgaata cctgatgaaa gacgtgcgcg accgcgtcag cctcaaaggg
    12961 ctgaaagacg gcaacgaatt gcgcggcgcg ctgaaagaag ccttgtacga cctgattaag
    13021 cctctagaga aaccgctggt tttgcccgaa accaaagagc cgtttgtcat catgcttgct
    13081 ggcatcaacg gcgcgggcaa aaccacatcc atcggcaaac tcgccaaata tttccaagcg
    13141 cagggcaaat ctgtgctgct tgccgccggc gatactttcc gcgccgccgc gcgtgagcag
    13201 cttcaagctt ggggcgaacg caacaacgta accgtgattt cgcaaaccac gggcgattcc
    13261 gccgccgtgt gcttcgatgc cgtccaagcc gccaaagcgc gcggcatcga cattgtgctg
    13321 gccgacaccg ccggccgcct gcccacgcag cttcacttga tggaagaaat caaaaaagtg
    13381 aaacgcgtgc tgcaaaaagc catgcccgac gcgccacacg aaatcatcgt cgtgcttgat
    13441 gccaatatcg gtcaaaacgc cgtcaaccaa gtcaaagcct ttgacgacgc attggggctg
    13501 accggtttaa ttgttaccaa gctagacggc acggcaaaag gcggcatcct cgccgcgctt
    13561 gcctccgacc gccccgtccc cgtccgctat atcggcgtgg gcgaaggcat agacgatttg
    13621 cgcccgtttg acgcgcgcgc gtttgtggac gcactgctgg attgagccga aatgccgtcc
    13681 gaaaacagca gaccgatgcc gtcattcccg cgcaggcggg aatctagaac catcggcacg
    13741 gaaacttatc gggtaaacgg tttcttgaga tttttcgtcc tggattccca ctttcgtggg
    13801 aatgacggaa tgtaggttcg tgggaatgac gggatttgag attgcggcat ttatcggaaa
    13861 aaacagaaac cgttctgccg tcattcccgc gcaggcggga atccagacct tagaataaca
    13921 gcaatattca aagattatct gaaagtccgg gattctagat tcccactttc gtgggaatga
    13981 cggaatgtag gttcgtggga atgacgcggt gcaggtttcc gtatggatgg gttcgtcatt
    14041 cccgcgcagg cgggaatcta gaccttagaa taacagcaat attcaaagat tatctgaaag
    14101 tccgggattc tggattccca ctttcgtggg aatgacggga tgtaggttcg cgggaatgac
    14161 gggatttgag attgcggcat ttatcggaaa aaacagaaac cgttctgccg tcattcccgc
    14221 gcaggcggga atctagacct tagaataaca gcaatattca aagattatct gaaagtccga
    14281 gattctagat tcccactttc gtgggaatga cgggatgtag gttcgcggga atgacgggat
    14341 ttgagattga ggcatttatc ggaaaaaaca gaaaccgctc cgccgtcatt cccgcgcagg
    14401 cgggaatcta gaccttagaa caacagtaat attcaaaggt tagctgaagc tttagagatt
    14461 ctagattccc actttcgtgg gaatgacggg atttgagatt gcagcattta tcggaaaaaa
    14521 cagaaaccgc tccgccgtca ttcccgcgca ggcgggaatc taggtttgtc ggtgcggaaa
    14581 cttatcgggt aaaacggttt ctttagattt tgcgttctag attcccactt tcgcgggaat
    14641 gacgaagagt tgcgggaatg atggaaagct atgggaataa cgaagggtta aagtaatcac
    14701 gggatggtgt tcgcgggaat ataaatttaa ataattcaaa agggtgttat atgcagcctg
    14761 cggtttatat tttagcaagc caacgtaatg gcacgttata cattggcgtt acatctgatt
    14821 tggtgcaacg tatttaccaa catagggaac atttgattga gggatttaca tcacggtaca
    14881 acgttactat gctggtttgg tatgaactgc atcctacgat ggagagcgca attactcggg
    14941 aaaaacagtt gaagaaatgg aacagggctt ggaaattgca actgattgaa gaaaataatg
    15001 tttcttggca ggatttatgg tttgatatta tttagcccgt cattcccgcg caggcgggaa
    15061 tctagaacgt aaaatctaaa gaaaccgttt tacccgataa gtttctgtgc cgacagacct
    15121 agattcccac tttcgtggga atgacggaat gtaggttcgt gggaatgacg cggtgcaggt
    15181 ttccgtgcgg atggattcgt cattcccgcg caggcgggaa tccagacctt gggataacag
    15241 caatattcaa aggttataaa agacccgtca ttcccgcgca ggcgggaatc cagaccgttg
    15301 ggcatctgca gcggtttgct aaaaaacgct ttaccgtgat cagtgtgcaa agttaaaatg
    15361 gggaggtaag cttttcaacc agcaattcgg cgggcgcgga atcgggcggt ttaccgaacc
    15421 ccggcgttcg cggcgcgccg ccccgtcccg tgaaggcaaa ctcaaggaat aaaagatgaa
    15481 taaaacttgg aaacggcagg ttttccgcca taccgcgctt tataccgcca tattgatgtt
    15541 ttcccatacc ggcggggggg gggcaggcgc aggcgcaagc gcaaacgcaa acgcataaat
    15601 acgctattgt aatgaacaat caaaagctgc ctgaggtaaa gtgggggaac gactatagct
    15661 cattgacgga caaaagcaat gaacgcgaag ttacccatac gagtaaattt gttgtagcaa
    15721 aaaagcacat tagtttctca ttcaataata ccgatgaagt tgttgctgaa aaaaaagatg
    15781 ctgtcgtttt cggcgcggcg acttatctgc cgccctacgg caaggtttcc ggttttgata
    15841 ccgctaagct ggccgagcgc aaaaatgccc ttgatcagat tggtacgacc caccctgggt
    15901 tgataggcta caactaccaa gatgtcactt gcgccagcgg aaactgtcct gaacttagct
    15961 atagaaccca atttaccttc aataacgggt tgaaaagaaa tggaaacggc ggcaggctgg
    16021 atatatacga agacaaaagc cgcgacagtt cgcccattta caaattgaag gattatcctt
    16081 ggttgggcgt gtctttcaat ttgggcggcg agagctcctt caaaccaaag agacaaggtt
    16141 ctttggtatc ttcttttagc gaggatgtga cgcagcaaaa tggtacacaa gaccaataca
    16201 aaagcaaaaa cctcgtttat acgacagacg attacaatag taagggtaat aaaaaccatc
    16261 aggacaaaca ccacgccgtc gccttttatc tgaacgccaa gctgcatttg ctggataaaa
    16321 aacaaatcaa aaatatcgcg caaggcgtaa cagttgattt gggtaccttg aaaacacgca
    16381 tcgagccgac ggacgcgtgg aaaaacaggc aggggagcta ttttaataat agtacttgga
    16441 cgtatgaaga gaaaggatca gtcagcgtca aactcaaatt gccggaagtc aaagcaggcc
    16501 gctgcgtcaa cgcaaataac cccaataaga gtaccaaagc cccttccccc gccctgactg
    16561 cccccgcgct gtggttcgga cctgtgcaaa atggtaaggt gcagatgtat tccgcttcgg
    16621 tttctaccta ccccgacagt tcgagcagcc gcatcttcct tcaaaatctg gaaagaaaaa
    16681 ccgaccccgg cagacccggc cgctattccc tcaaaccctt gaatgaggcg cagattaaaa
    16741 gtaaagagcc gagtttcaca agtcggcaaa caatcatccg attggatggc ggcgtgcagc
    16801 agatcaaact ggatagaaac aatactgagg tcactggttt taatggaaac accaacaacg
    16861 acactttcgg tattgttaag gacttgggcg tcgatcctga taccaatgag tggaaaaaag
    16921 tattgctgcc ttggacggtt cgtgtttcca atgatgacgg tcgatttaac acagtcaaca
    16981 aagaaaaaaa caacggcaag ccaaaataca gtcaaaaata ccgcagccgc gacaacggca
    17041 agcacgagcg caatttgggc gacatcgtca acagccccat cgtggcggtc ggcgggtatt
    17101 tggcaaccgc cgcgaacgac gggatggtgc atatcttcaa aaaaggcaac ggcgtggacg
    17161 agcgcaacta tagtctgaag ctcagttata tcccgggcac gatgccgcgc aaggatattc
    17221 aaaacaccga atccaccctt gccaaagagc tgcgcacctt tgccgaaaaa ggctatgtgg
    17281 gcgaccgcta cggcgtggac ggcggctttg tcttgcgcca agtcgaacgg gacgggaaaa
    17341 cccgcgtgtt tatgttcggc gcgatgggct ttggcggcag aggcgcgtac gccttggatt
    17401 tgaccaaagc cgacgacaat gacccgacaa aagcctcttt gtttgatgta aaagataacg
    17461 gcaataatgg caataac
//
LOCUS       DAWGKF010000025        17358 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.025, whole genome shotgun sequence.
ACCESSION   DAWGKF010000025 DAWGKF010000000
VERSION     DAWGKF010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17358)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17358)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17358
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.025"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..200)
                     /locus_tag="WHR07_000595"
     CDS             complement(<1..200)
                     /locus_tag="WHR07_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129843.1"
                     /translation="MPSERLSDGIFPCVLNRIHETPDAFGGNVGCRAMFGGDQRTKYA
                     GKGLMPSEGSDGIGIGESEVVA"
     gene            complement(218..775)
                     /locus_tag="WHR07_000596"
     CDS             complement(218..775)
                     /locus_tag="WHR07_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEZ2129844.1"
                     /translation="MDALKLLTNRRSSKKLKHPAPDAAELEQIFQAATQVPDHGNMRP
                     FRFTVIQGEVGLQRFRDVLKQTVAELNFGDDAMKKAEKVGNMAPMVIGVTFAPNRDVP
                     KPKPEWEQMLTAGCAAYALQLAATAQGFDNVWITGMWVNSPLLREAFGCADKDKIIGL
                     MMVGTPTEEVHKPKNTDLEAFVSHW"
     gene            complement(851..2485)
                     /locus_tag="WHR07_000597"
     CDS             complement(851..2485)
                     /locus_tag="WHR07_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     transferase LptA"
                     /protein_id="HEZ2129845.1"
                     /translation="MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELHPFNGT
                     GADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKS
                     MLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAA
                     VSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLD
                     MAVVQNRPVGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLLAARGDEIVNFPQVRSC
                     GTSTAHSLPCMFSTFDRTDYDEIKAEHQDNLLDIVQRAGVEVTWLENDSGCKGVCGKV
                     PNTDVTSLNLPEYCRNGECLDNILLTKFDEVLNKNDKDAVLILHTIGSHGPTYYERYT
                     EAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESVVHYV
                     SDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENE
                     YSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR"
     gene            complement(2559..2891)
                     /locus_tag="WHR07_000598"
     CDS             complement(2559..2891)
                     /locus_tag="WHR07_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129846.1"
                     /translation="MSRCCLKRLQTASAVSAFSGGVLGCGVKLCCRRLSVLFNPGVML
                     FVPDCPVGGAAGFFQYEMLCPFFWQGRLQTGSNLAYDVFMSAGRLNGGRNPPHSRRFL
                     ALLCSVAL"
     gene            complement(2891..3997)
                     /gene="serC"
                     /locus_tag="WHR07_000599"
     CDS             complement(2891..3997)
                     /gene="serC"
                     /locus_tag="WHR07_000599"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HEZ2129847.1"
                     /translation="MSLYPIYNFSAGPAVLPEAVLETARQEMLDYNGTGFPVMAMSHR
                     SEMFLSILHHAEQDLRQLLKVPDNYKILFLQGGATTQFNMAAMNLAHGFRTADAVVTG
                     NWSRIAYEQMSRLTDTEIRLAAHGGEQFDYLDLPPVETWDVAPDSAFVHFAVNETVNG
                     LQYREVPRLSEGMPPLVCDMSSEILSREFDVADYGLIYAGAQKNIGPAGVTVVIVRED
                     LLERCPNDIPDVFNYRSHINRDGMYNTPSTYAIYMSGLVFRWLQAQGGVKKIEAVNRL
                     KAQTLYETIDGSGGFYINRIRPNARSKMNVVFQTGDEELDRRFVLEAELQGLCLLKGY
                     KSVGGMRASIYNAMPLEGVRALADFMRDFQRRYG"
     gene            4362..4793
                     /gene="rimP"
                     /locus_tag="WHR07_000600"
     CDS             4362..4793
                     /gene="rimP"
                     /locus_tag="WHR07_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HEZ2129848.1"
                     /translation="MDIQTILEKTLPGLGYELVDFELTAQGTLRVFIDKEGGITVEDC
                     ATVSNHLSRVFMVEDIDYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQK
                     NFIGKIEGCENDTVTVSFDGKTVQIELGNIDKARLRPEFKF"
     gene            4821..6323
                     /gene="nusA"
                     /locus_tag="WHR07_000601"
     CDS             4821..6323
                     /gene="nusA"
                     /locus_tag="WHR07_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HEZ2129849.1"
                     /translation="MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKADREHM
                     DVRVQINRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTTIQIGEYYEEQL
                     PNEGFGRQAAQTAKQIILQRIRDAEREQNLNEFLAVKEDIVSGTVKRVERHGIIVEVV
                     AGKLDALIPRDQMIPRENFRSGDRIRALFLRVEEIGNIGRKQVILSRTSGDFLVKLYA
                     NEVPEIADGMLEIRAVARDPGQRAKVAVKANDQRIDPQGTCIGVRGSRVNAVSNELSG
                     ERIDVVLWSPEPAQFVMSALSPAEVSRIVIDEDKHAVDVIVAEDQLALAIGRGGQNVR
                     LASDLTGWQLNIMTSAEADERNAAEDAAIRRLFMDYLNVDEETADVLVQEGFATLEEV
                     AYVPAAELLAIEGFDEEIVDMLRNRARDAILTMAIAAEEKLGEVSDDMRNLEGIDADM
                     LRSLAEAGITTRDDLAELAVDELIEITGVNEETAKAVILTAREHWFTEDK"
     gene            6335..9223
                     /gene="infB"
                     /locus_tag="WHR07_000602"
     CDS             6335..9223
                     /gene="infB"
                     /locus_tag="WHR07_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEZ2129850.1"
                     /translation="MSNTTVEQFAAELKRPVEDLLKQLKEAGVSKNSGSDSLTLDDKQ
                     LLNAYLTKKNGSNGGTISIRRTKTEVSTVDGVKVETRKRGRTVNIPSAEELAAQVKAA
                     QTQAAPVRPEQTAEDAAKARAEAATRAEARAKAEAEAAKLKAAKAGNKAKPAAQKPTE
                     AKAETAPVAAETKPAEESKAGKAQADKMPSKKPAEPKEKAAKPKHERNGKGKDAKKPA
                     KPAAPAVPQPVVSAEEQAQRDEEARRAAALRAHQEALLKEKQERQARREAMKQQAEQQ
                     AKAAQEAKTGRQRPAKPAEKPQAAAPAVENKPVNPAKAKKEDRRNRDDEGQGRNAKGK
                     GGKGGRDRNNARNGDDERVRGGKKGKKLKLEPNQHAFQAPTEPVVHEVLVPETITVAD
                     LAHKMAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLD
                     EGAEAVEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVET
                     PRGVITFLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPM
                     VVAVNKIDKEAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLE
                     AEVLELTAPVDAPAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAM
                     VDENGKSITEAGPSIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLA
                     KQQAAKLENMFNNMGETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGV
                     GGITESDVNLAIASGAFIIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMS
                     GMLSPEEKEQVTGTVEIRQVISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGE
                     LASLKRYKDDVKEVRMGFECGLMLKGYNEIMEGDQLECFDIVEVARSL"
     gene            complement(9435..10829)
                     /locus_tag="WHR07_000603"
     CDS             complement(9435..10829)
                     /locus_tag="WHR07_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase/DUF3482 domain-containing protein"
                     /protein_id="HEZ2129851.1"
                     /translation="MNKQPLSLAVVGHTNTGKTSLLRTLLRDSGFGEVRNAPSTTRHV
                     EEAAISDGADTLVFLYDTPGLEDAGGVLEWLENHTDNRSDGIERLQQFLGSHGAHHDF
                     NQEAKVLRQVLQSDMAMYVIDAREPVLDKYRDELTILSWCAKPVMPVFNFTGGQLPES
                     WTTMLARRNLHVFAGFDTVAFDFEGELRLWENLATMLPERSTLDRLTAMRRREWQRLD
                     GEARREIADFLLDAAAFRQEVDENEDTATVLQTMQAEIRQLERQMQQRLFALYRFYHS
                     EIDGGDWMPQAFRQDPFDSELLKQYGIRTGTGAATGALIGLGLDIATLGGSLGLGTAI
                     GGFLGGILPNTRTISDKLAGRQTLHTDPETLTLLAARALDLLHVLQTRGHAAQSDIEL
                     HSRKAPWDAARLPPELNKARSHWKWSSLNTHRPETSRAERAGYVEKLQIRLSGKYSEL
                     NLNQDKAASRRQYK"
     gene            complement(10903..12243)
                     /locus_tag="WHR07_000604"
     CDS             complement(10903..12243)
                     /locus_tag="WHR07_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2868 domain-containing protein"
                     /protein_id="HEZ2129852.1"
                     /translation="MLNPSRKLVELIRILDEGGFIFSGDPVQATEALRRVDGSTEEKI
                     IRRAEMIDRNRMLRDTLERVRAGSFWLWVAAATFAFFTGFSGTYLLMDNQGLNFFLVL
                     AGVLGMNTLMLAVWLAMLFLRVKVGRFFSSPATWFRGKDPVNQAVLRLYADEWRQPSV
                     RWKIGATSHSLWLCTLLGMLVSVLLLLLVRQYTFNWESTLLGDSSSVRLVEMLAWLPA
                     KLGFPVPDARAIIEGRLNGNIADARAWSGLLVGSIACYGILPRLLAWAVCKILLKTSE
                     NGLDLEKPYYQAVIRRWQNKITDADTRRETVSAVSPKIVLNDAPKWAVMLETEWQDGE
                     WFEGRLAQEWLDKGVAANREQVAALETELKQKPAQLLIGVRAQTVPDRGVLRQIVRLS
                     EAAQGGAVVQLLAEQGLSDDLSEKLEHWRNALAECGAAWLEPDRAAQEGRLKDQ"
     gene            12386..13012
                     /locus_tag="WHR07_000605"
     CDS             12386..13012
                     /locus_tag="WHR07_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HEZ2129853.1"
                     /translation="MYTGERFNTYSHLSGLILAAAGLALMLLKTIGHGDGYRIFSVSV
                     YGISLLLLYLSSSLYHGIAAGKLKSILKKTDHCMIYVLIAGSYTPFALVSLRNGPGWT
                     VFSLSWLLAAAGIAQELTIGRKSEKRLLSIAIYVVMGWMVLAVMKSLTASLPLAGLAW
                     LAAGGMLYSVGIYWFVNDEKIRHGHGIWHLFVLGGSITQFVSVYGYVI"
     gene            complement(13076..14494)
                     /locus_tag="WHR07_000606"
     CDS             complement(13076..14494)
                     /locus_tag="WHR07_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEZ2129854.1"
                     /translation="MENILSVLVGTVNRFLWDYLLIYALLGIGLFFTLYLGAPQITKL
                     GAGFKSVFGGLFAKGDKDDKSLSQFQALAVAISAQIGTGNVAGVATAITAGGPGAIFW
                     MWVSAVLGMSTIFAEALLAQKYRVVSHGKYIGGPAFYITHGLTPKIGRGAARFLSGFF
                     SIALIIALGFIGNATQANSIASAVTIAFDVPSLAVGIVLAVLAGMVVIGGVNRIANIA
                     QFVVPFMAVVYILCAVVILFEFSDYIVPMFNHIFTAAFNPEAVLGGAAGIGMREAIRF
                     GVARGLFSNEAGMGSTPHAHATADVKHPVQQGMAAFVGVFIDTILVCTATALIILLTD
                     ANLSGEQGAAVTQFAFNKAFPGFGSQLLAVCLTFFALTTIIGWYYFGESNIRFLFRGR
                     HLGIYRALVLLAIVLGTLGKVDLVWSLSDMFNGFMVIPNLIALFLLRKEIRAIYDDYL
                     AQKKAGRDLSYQYEFHEFHDKG"
     gene            14821..15549
                     /locus_tag="WHR07_000607"
     CDS             14821..15549
                     /locus_tag="WHR07_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEZ2129855.1"
                     /translation="MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPG
                     ANPRLRLALEKAAENNMPKDNVQRAIDKGTGNLEGVEYIELRYEGYGIGGAALMVDCL
                     TDNKTRTVADVRHAFTKNGGNLGTDGCVAFNFVHQGYLVFEPGVDEDALMEAALEAGA
                     EDVVTNDDGSIEVITAPNDWAGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQ
                     KLIDALEDLDDVQDVYTSAVLNLD"
     gene            complement(15608..16096)
                     /locus_tag="WHR07_000608"
     CDS             complement(15608..16096)
                     /locus_tag="WHR07_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HEZ2129856.1"
                     /translation="MTPLFRKAVWLLFAVSVCAFAGSLAAQYVLGMEPCVLCISQRLC
                     VLATALCTAIVLMCRPRRRAGGLFGAVFISIPAVTGISVAAYQLWLQSLPPGTAPSCG
                     APWTFRLKGWSLFDWFEPVVRGFGNCAEPDYLLGVALPVWSAAYFLAVVLTVWWAWAR
                     AK"
     gene            complement(16854..17318)
                     /locus_tag="WHR07_000609"
     CDS             complement(16854..17318)
                     /locus_tag="WHR07_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HEZ2129857.1"
                     /translation="MKELDKIDFRILKILQQNARIPMTELAEKVGLSTTPVTERVRRL
                     EREHYISGYHAHLNPHLLGKPLLVFVELKLQSKSGNIFEDFKKEVLKIPQIMECHLVS
                     GEYDYLIKVRLPDMSAYRDMLGNILLQLPAASESRSYVVMEEVKENPVLDLD"
BASE COUNT         4564 a         4848 c         4368 g         3578 t
ORIGIN      
        1 tgcgctacca cttctgattc cccgataccg atgccgtctg aaccttcaga cggcatgaga
       61 cctttgcctg cgtacttggt acgctggtcg cctccgaaca tggcgcgaca cccgacattt
      121 ccgccgaacg catcgggcgt ttcatgaatc cggtttaaaa cgcatggaaa aatgccgtct
      181 gaaagccttt cagacggcat ttcgcttgag attccgttta ccaatggctg acaaacgctt
      241 ccaaatcggt attcttgggc ttatgcactt cctctgtcgg cgtgccgacc atcatcagcc
      301 cgatgatttt atccttatcc gcacatccga aagcctcacg caacaggggg ctgttgaccc
      361 acatccccgt aatccagaca ttgtcgaaac cttgcgccgt tgccgccagt tgcagcgcat
      421 acgccgcaca acccgccgtc agcatctgct cccattccgg tttcggctta ggcacatcgc
      481 ggttcggcgc aaacgttacc ccgataacca tcggcgccat attgcccact ttttcagcct
      541 ttttcatcgc atcgtcgccg aaattcaatt cggcaaccgt ttgcttcaac acatcgcgaa
      601 aacgttgcaa tcctacctcg ccttgaatca cggtaaaacg gaaggggcgc atattgccgt
      661 gatcgggaac ttgggttgcc gcctgaaata tttgttccaa ctccgccgca tcgggggcgg
      721 ggtgcttcag ctttttggaa gatcggcggt tcgtcaataa ttttaaagca tccatatcgt
      781 tatactccgg tcatcggtcg ggtgttcgga cacatatgcc gtccgaaggc ttcagacggc
      841 atatccggca tcagcgcgga cggcggcagg ctgccaatat atccatttcc ttccgatagg
      901 tttggctatt ggaaatgtcc atcagcccca ataccgtgct gaaatagtgg tcgtgcgaat
      961 attcgttttc cgccgctttt tgtttgaggc attggaaatc tatgcccccg tgttggcgga
     1021 aggctttgga aaaccacata accatcggga tatgcgtctg cccggaaggc gcgatggcgt
     1081 aaggcgcggc gtgcaggtac atcccgtttt cgcccaaact ttcgccgtgg tcggaaacat
     1141 aatgcaccac gctttccaaa tcgtcgcggt tttcaagttt gcggataacc ttgtcgataa
     1201 actggtccac atacaaaacc gtattgtcgt aagtgttgac cagcgtggcg cgggtgcatt
     1261 tgttgatttc gttggtgtcg caggtcggcg tgaatttgcg ttcggcttcg gtatagcgtt
     1321 cgtaatacgt cggcccgtgg ctgccgatgg tatgcaggat taaaaccgcg tctttatcgt
     1381 ttttgttgag gacttcgtcg aacttagtca gcaggatatt gtcgagacac tcgccgttgc
     1441 ggcagtattc gggcaggttg agcgaggtaa cgtcggtatt cggcactttg ccgcacacgc
     1501 ccttgcagcc ggaatcgttt tccaaccaag taacttccac gccggcgcgc tgcacgatgt
     1561 ccagcaggtt gtcttggtgt tcggctttga tttcgtcata atccgtgcgg tcgaaggttg
     1621 agaacataca cggcagggag tgcgcggtcg atgtgccgca gcttctgacc tgcgggaaat
     1681 tgacaatttc atcgccgcgc gcggcaagca gcggcgtagt ttggcggctg taaccgttca
     1741 aaccccagtt ggcggcacgc gtggtctcgc ccacgaccag caccacgaaa cggcgcaggc
     1801 tgccgaccgg ccggttttgc acgaccgcca tatccaattg cgtataagga atattggaac
     1861 gcttccaatc tttgtatttc gacacgcccg cgccgatgaa attagacggc acaatcagat
     1921 gggttactga tttattgttg cggaaaaacg aggcgtaatc ctgatattgc aacattgcga
     1981 tgcccaacgc gcacaaaaag gaaacggcgg caagcacaag gcgtgtcaaa agctccttat
     2041 accaaacgcg gtatttaacc ttgacggcga tatacgccag cgcgggcaat acgcccaaac
     2101 atacaatcca cagcacatag cccggcgtaa tcaggcgcgc gctttcggca gccgtagttt
     2161 gcaagacatt attcaacatc gacttgttga aatagatatt gaaaaatatt tcttggtaag
     2221 acaccgccgc actgataacc aatatcaacg gaatcaatac cttatgcacg aaaggcaggg
     2281 caatgacgtg aaaaacgaaa ttacttaaaa aaaacagcac caccggcatc gtatagagga
     2341 agatatccgc cccggtgccg ttaaaaggat gaagctcgac aactttggca aaaaaggcgt
     2401 aattcaatac cagcgaggaa tacagggaaa ggaaggcaat cagcgcggaa gagccgagct
     2461 tcggcctcag gttcggtttt atcatttgga atgtgtcgga taagggttgg aaaaggcatc
     2521 cggcatttgg aatccggatt attgaaaaag attcttaatt ataaggcaac ggagcaaagc
     2581 agggcaagaa aacggcggct gtgcgggggg ttccgcccgc cattcaaacg tccggcagac
     2641 ataaaaacat cgtaagcaag attcgaaccg gtctgcaacc gcccctgcca gaaaaacggg
     2701 caaagcattt catattggaa aaacccggcc gcgccgccga cgggacagtc cggcacaaac
     2761 agcatcacgc ccggattgaa aaggacggat agccgccggc agcacagttt taccccgcat
     2821 cccaaaacgc cgccggagaa cgccgaaaca gccgatgccg tctgaagccg cttcagacaa
     2881 catcgggaca tcaaccgtaa cgccgttgga aatcgcgcat aaaatctgcc aaagcccgca
     2941 cgccttcgag cggcatcgca ttgtagatgc tggcgcgcat cccgccgaca gacttatagc
     3001 ccttcaacag gcacaagccc tgcaattcgg cttccagcac aaaacggcgg tcaagctcct
     3061 catcccccgt ttggaacacg acattcattt tagaacgcgc attcggacgg atacggttga
     3121 tataaaaacc gccactgccg tctatcgtct catacaaggt ttgcgccttc agccgattga
     3181 ccgcttcaat ttttttcaca ccgccctgcg cctgcagcca gcggaacacc agccccgaca
     3241 tataaatcgc gtaagttgac ggcgtgttgt acataccgtc gcggttgatg tgcgaacggt
     3301 agttgaacac atcgggaata tcgttcggac aacgctcgag caaatcctca cgcacaatca
     3361 ccaccgtaac ccctgccggc ccgatgtttt tctgtgcgcc tgcgtaaatc agtccgtagt
     3421 cggcaacatc aaactcgcgc gacaaaatct cgctggacat atcgcacacc agcggcggca
     3481 tgccttctga aaggcgcggc acttcacggt attgcagccc gttgaccgtt tcattgacgg
     3541 caaaatggac aaacgccgaa tcgggtgcaa catcccacgt ttccacaggc ggcaggtcga
     3601 gatagtcgaa ctgctcgccg ccatgcgccg ccaaacggat ttccgtatcg gtcaaacggc
     3661 tcatctgttc ataagcgata cggctccagt tgcccgttac caccgcgtcg gcagtgcgga
     3721 aaccgtgtgc cagattcatg gctgccatat taaattgggt tgttgctccg ccctgcagaa
     3781 acaatatctt atagttgtca ggcactttca aaagctgcct caaatcctgt tccgcatgat
     3841 gcaggatgct caaaaacatt tccgaacggt ggctcatcgc catcacggga aaacccgtac
     3901 cgttgtagtc caacatttcc tgccgcgccg tttccaacac ggcttcgggc aatacggcag
     3961 ggccggcgga aaaattgtaa atcggataaa gagacatgat gcagccttga ttctgaacaa
     4021 taacccgccc gattttaggc ttgcagcagg ctttgtgcaa ggatggaaaa tacctgtcct
     4081 ccgccccgct tcatgccgcc cgaacacaga aaacaacatc aatatattga tttacaaaca
     4141 taaaaatcat gcacgcgaca aatagataca tttgttttgt caacaatatt cacgatttcc
     4201 cattacaaac ctcccttaca tccgcttttt tccgtcccaa aaacacaaaa taaatcaaca
     4261 ctttcatttc tccgcaaaag cggttataat tacgccgatt tttcaacttt gacgaaaaat
     4321 ggccacgggg ccattttttt attatgtaca tagggagcag catggatatc caaaccatcc
     4381 tcgaaaaaac cctgcccggc ctgggctacg aactggtcga ttttgaactg accgcgcaag
     4441 gaacattgcg cgtgttcatc gacaaagaag gcggcattac cgtcgaagac tgcgcaaccg
     4501 tcagcaacca cttgagccgc gtcttcatgg ttgaagacat cgactacaaa aacctggaaa
     4561 tttccagccc cggactcgac cgccccttga aaaaagccgc cgacttcgta cgctttgccg
     4621 gtcagaatgc caaaatcaaa acccgcctgc cgatagacgg tcagaaaaac tttatcggta
     4681 aaatcgaagg ctgcgaaaac gacactgtta ccgtttcctt cgacggcaaa accgtacaaa
     4741 tcgaattggg caacatcgac aaagcccgcc tgcgccccga attcaaattc taaaacacaa
     4801 caatattgga gatgttcaaa atgagtcgtg aaatgttaca gctggcagaa gcactggcaa
     4861 gcgaaaaaaa cgttgatgcg gaagtcgtct tccaagcact ggaattcgcc ctgtctaccg
     4921 ccgccaagaa aaaggcagac cgcgaacaca tggacgtgcg cgtccaaatc aaccgcgaca
     4981 ccggcgaata ccaaaccttc cgccgctggc tgattgtcgc cgatgaagac tatacctatc
     5041 ccgatgtcga aaaaaccatc gaggaaatcc aagaggaaat tcccggcact accatccaaa
     5101 tcggcgaata ctacgaagag cagctaccca acgaaggctt cggccgccaa gccgcacaaa
     5161 ccgccaaaca aatcatcctg caacgcatcc gcgatgcgga gcgcgagcaa aatctgaacg
     5221 agtttctcgc cgtcaaagaa gacatcgtgt ccggtacggt caaacgcgtc gaacgccacg
     5281 gcatcatcgt cgaagtcgtt gccggcaaac tggacgcgct gattccgcgc gaccaaatga
     5341 ttccgcgcga aaacttccgc agcggcgacc gcatccgcgc cctcttcctg cgcgtcgaag
     5401 aaatcggcaa catcggccgc aaacaagtca tcctgagccg tacttccggc gatttcctcg
     5461 tcaaactgta cgccaatgaa gtacctgaaa ttgcagacgg catgcttgaa atccgcgctg
     5521 tcgcccgcga cccgggacaa cgtgccaaag tcgccgtcaa agccaacgac cagcgcatcg
     5581 atccgcaagg cacctgtatc ggcgttcgcg gttcgcgcgt caacgcggtc agcaacgaat
     5641 tgtccggcga acgcatcgac gttgtccttt ggtcgcccga gcctgcccaa ttcgtcatga
     5701 gcgcgctctc acccgccgag gtcagccgca tcgtcatcga cgaagacaaa cacgccgtcg
     5761 atgtcatcgt tgccgaagac cagctcgcgc tcgccatcgg acgcggcggt caaaacgtgc
     5821 gccttgcttc cgacctgact ggctggcagc tcaacatcat gacctctgca gaagcagacg
     5881 agcgcaatgc ggcagaagat gccgccatcc gccgcctgtt tatggattac ttgaacgtgg
     5941 acgaagaaac cgccgacgta ctggttcagg aaggttttgc aaccttggaa gaagtcgcct
     6001 atgttcctgc cgccgaactg cttgccattg aaggatttga cgaagaaatc gtcgatatgc
     6061 tccgcaaccg cgcccgcgat gccatcctga ccatggcgat tgccgccgaa gaaaaactgg
     6121 gcgaagtatc cgacgatatg cgcaacctcg aaggcataga tgccgatatg ctccgcagcc
     6181 ttgccgaagc aggcattacc acccgcgacg acttggcaga gcttgctgtg gacgaactga
     6241 ttgaaatcac cggtgtaaac gaagaaaccg caaaagccgt catcctgacc gcacgcgaac
     6301 actggtttac cgaagacaaa taaagggggt acagatgagt aacacaaccg tagaacaatt
     6361 tgccgccgag ctgaaacgcc ccgtcgaaga cctgttgaaa cagttgaaag aagccggcgt
     6421 cagcaaaaac agcggcagcg attccctgac gctggacgac aaacagcttc tgaacgccta
     6481 cctgaccaag aaaaacggca gcaacggcgg caccatcagc atccgccgca ccaaaaccga
     6541 agtcagcacc gttgacggcg taaaagtcga aacacgcaaa cgcggacgca ctgtcaacat
     6601 tccttctgcc gaagaattgg cagcacaggt aaaagccgcc caaacccaag ccgcacctgt
     6661 ccggccggag cagacggcag aagacgcggc aaaagcccga gccgaagctg ccacacgtgc
     6721 agaagcccgt gccaaggcag aagcggaagc ggcaaaactg aaagcggcaa aagcaggcaa
     6781 caaagccaaa cctgccgcgc agaaacccac cgaagcaaaa gccgaaaccg cacccgttgc
     6841 ggcggaaacc aaacccgccg aagaaagcaa agcgggaaaa gcccaagccg acaaaatgcc
     6901 gtctaaaaaa cccgccgagc ccaaagaaaa agccgccaag ccgaaacacg agcgaaacgg
     6961 caaaggcaaa gatgccaaaa aaccggcgaa acctgccgca cctgccgtgc cgcaacccgt
     7021 ggtcagcgcg gaagaacagg cgcaacgcga tgaagaagca cgccgtgccg ccgcacttcg
     7081 cgcccaccag gaagccctgt tgaaagagaa acaggaacgc caggcacgcc gcgaagccat
     7141 gaaacaacag gcagaacaac aggcaaaagc cgcacaggaa gccaaaaccg gcagacagcg
     7201 tcccgccaaa cctgccgaga aaccgcaggc agccgcgccg gccgtcgaaa acaaacctgt
     7261 caatccggca aaagcgaaaa aagaagaccg ccgcaaccgc gatgacgaag gtcaaggccg
     7321 caacgccaaa ggcaaaggcg gaaaaggcgg acgcgaccgc aacaatgcac gcaatggcga
     7381 cgacgagcgc gtacgcggcg gcaaaaaagg caaaaaactc aaactcgagc cgaaccaaca
     7441 cgccttccaa gcaccgaccg aacctgtcgt acacgaagtt ttggtgcctg aaaccattac
     7501 cgttgccgac ttggcacaca aaatggcagt caaaggcgtg gaagtggtca aagccctgat
     7561 gaagatgggc atgatggtta ccatcaacca atccatcgac caagacaccg ccctgattgt
     7621 cgtcgaagaa ctcggacata tcggtaaacc tgccgcagcg gacgaccccg aagccttctt
     7681 ggacgagggc gcggaagcag tggaagccga agcattgccg cgtccgcccg tcgttaccgt
     7741 gatgggccac gtcgaccacg gcaaaacctc gctgctggac tacatccgcc gtaccaaagt
     7801 ggtacagggc gaagcgggcg gcattacgca gcacatcggc gcgtaccacg ttgaaacccc
     7861 tcgcggcgtg attaccttct tggacacccc gggccacgaa gcctttaccg ctatgcgcgc
     7921 acgcggtgcg aaagcaaccg acatcgtgat tcttgtggtc gccgccgacg acggcgtgat
     7981 gccgcaaacc atcgaagcga ttgcccacgc caaagcggca ggcgtaccga tggtggttgc
     8041 cgtcaacaaa atcgataaag aagccgccaa cccagagcgt atccgccaag agctgaccgc
     8101 acacgaagtc gtgcctgacg aatggggcgg cgatgtacag tttatcgacg tttccgctaa
     8161 aaaaggcctg aacatcgatg cattgctcga agcagtcttg ctcgaagccg aagttttgga
     8221 actgactgcc cctgtcgatg cacctgccaa aggtatcatc gttgaggcac gtttggacaa
     8281 aggccgcggc gcggttgcca cattgctggt tcaaagcggt acgctgaaaa aaggcgatat
     8341 gctgctggcc ggtacggcat tcggcaaaat ccgcgcgatg gtcgatgaaa acggcaaatc
     8401 cattaccgaa gccggcccgt ccatccccgt cgaaatcctc ggcttgtccg acgtaccgaa
     8461 tgcgggtgaa gacgcgatgg tattggcgga cgagaaaaaa gcgcgcgaaa tcgccctctt
     8521 ccgccaaggc aaataccgcg acgtgcgcct tgccaaacag caggcggcga agctggaaaa
     8581 tatgttcaac aatatgggcg aaacccaggc ccaatccttg tccgtcatca tcaaagcaga
     8641 cgttcagggc tcttacgagg ctttggcggg cagcctgaaa aaactgtcca ccgacgaggt
     8701 gaaagtgaac gtgttgcaca gcggcgtggg cggcattacc gaatcggatg tcaaccttgc
     8761 catcgcttcg ggcgcgttca ttatcggctt taacgtgcgt gcagatgcct cttcgcgcaa
     8821 acttgccgaa aatgaaaacg tggaaatccg ctactacaac atcatctatg atgccatcga
     8881 cgacgtgaaa gcggcgatga gcggtatgct ttctcccgaa gagaaagaac aggttaccgg
     8941 tacggtcgaa atccgtcagg ttatctccgt ttccaaagtc ggcaatattg caggctgtat
     9001 ggttaccgac ggcgtggtca aacgcgattc ccatgtccgc ctcatccgca acaacgtggt
     9061 tatccacacg ggcgaactgg cttcgttgaa acgctataaa gacgatgtaa aagaagtccg
     9121 catgggcttc gagtgcggtc tgatgctcaa aggctacaac gaaatcatgg aaggcgacca
     9181 actggaatgc ttcgacatcg tcgaagttgc ccgcagcctg taattccttt gcaaataaaa
     9241 tgccgtctga agcgttcaga cggcatacga aacgggttct gtatcataca gaacccgttt
     9301 tttgtcgcaa atcggcttca gacagccctc ctgccttatc ccgatttgaa tctgacttgc
     9361 catacaaaca ggcttcagac ggcattatag tgaattaaat ttaaaccggt acagcgttgg
     9421 ctcgccttgc cgtactattt gtactgtctg cggctcgccg ccttgtcctg atttaaattt
     9481 aattcactat attttcccga caggcggatt tgaagtttct ccacatatcc ggcgcgttcg
     9541 gcgcggctgg tttcggggcg gtgcgtattg agcgacgacc atttccaatg actgcgggct
     9601 ttgttgagtt cgggcgggag tctggcggcg tcccacgggg ctttgcggct gtgcaactcg
     9661 atatccgatt gtgccgcgtg tccgcgcgtt tgcaggacgt ggagcagatc gagggcgcgg
     9721 gcggcgagca gggtcagggt ttcagggtcg gtgtgcaagg tttggcggcc ggcgagtttg
     9781 tcggaaatgg tgcgggtatt gggcaggatg ccgcccaaaa agccgccgat tgccgtaccc
     9841 aatccgagcg agccgccgag tgtggcgatg tccagcccca agccgatgag tgcgccggtt
     9901 gccgcgcccg tgccggtgcg gatgccgtat tgtttgagca attcgctgtc gaacgggtct
     9961 tggcggaagg cttgcggcat ccagtcgccg ccgtcgattt cgctgtggta gaaacggtag
    10021 agggcaaaca gccgctgctg catctgccgt tcgagttggc gtatttccgc ctgcatggtt
    10081 tgtagcacgg tggcggtatc ctcgttttcg tccacttcct gcctgaaggc ggcggcatcg
    10141 agcaggaaat cggcgatttc gcggcgcgct tcgccgtcca gccgctgcca ttcgcgccgg
    10201 cgcatggctg tcaggcggtc aagtgtgctg cgttcgggca acatggtggc gaggttttcc
    10261 cacaggcgta gttcgccttc aaaatcaaag gcgacggtgt cgaaccctgc gaaaacgtgc
    10321 aggtttctcc tcgccagcat ggttgtccac gattcgggaa gctgtccgcc ggtaaagttg
    10381 aacacgggca taactggttt ggcacaccat gaaaggatgg tcaattcatc ccgatatttg
    10441 tcgaggacgg gctcgcgcgc gtcgatgacg tacattgcca tatcgctttg caagacttgc
    10501 cgtaagactt tggcttcctg attgaaatca tggtgcgcgc cgtggctgcc gagaaactgt
    10561 tgcagccgtt cgatgccgtc tgaacgattg tccgtatggt tttccagcca ttccagcacg
    10621 ccgcccgcgt cttcaagtcc gggcgtgtcg tacaggaaaa ccagcgtgtc tgcgccgtcg
    10681 ctgatggcgg cttcttcgac atggcgtgtg gtcgatgggg cgtttctgac ttcgccgaaa
    10741 ccgctgtcgc gcaacagggt acgaaggagc gaggttttgc cggtattggt atgcccgacg
    10801 acggcgaggg aaaggggttg tttgttcatg atgtttttga agaatggatt ttcagacggt
    10861 cttttttcag aatggcggct taacagaaca tttcaagtga gtttattggt ctttcaaacg
    10921 cccttcctgc gccgccctgt caggctcaag ccacgccgcg ccgcattcgg ccagcgcgtt
    10981 acgccaatgt tccagctttt ccgaaaggtc gtctgaaagc ccctgttccg ccaaaagctg
    11041 caccaccgcg ccgccctgcg ccgcttccga aagtcggacg atctgccgca acacgccgcg
    11101 gtcgggcaca gtttgggcgc gcacgccgat aagcagttgc gccggtttct gcttcagctc
    11161 tgtctccagc gcggcaacct gttcccgatt ggcggcaacg cccttatcca gccattcctg
    11221 cgccagcctg ccctcgaacc attcgccgtc ctgccattcg gtctccagca tgaccgccca
    11281 tttcggcgca tcgttcaaga cgattttcgg cgaaacggcg gacacggttt cccgacgcgt
    11341 atccgcatcg gtgattttgt tctgccagcg gcggatgacc gcctgataat agggtttttc
    11401 caaatccaat ccgttttcgc ttgttttcaa aaggattttg cataccgccc aagccaagag
    11461 gcgcggcagg atgccgtagc aggcgatact gccgaccagc agccccgacc aagcccgcgc
    11521 atcggcaata ttgccgttca gacggccttc gatgatcgcc cgcgcatcag gcacgggaaa
    11581 acccagtttc gcaggcagcc atgccaacat ttccaccagc cgtaccgaag acgaatcgcc
    11641 caacagcgtg ctttcccagt tgaacgtata ttgccgcacc aaaagcagca acaataccga
    11701 caccagcatt ccgagcagcg tgcagagcca caggctgtgc gacgttgcgc ctattttcca
    11761 acgtaccgaa ggttgccgcc actcgtccgc atacagccgc aacaccgcct gatttacagg
    11821 gtctttgccc cgaaaccacg tcgccggact gctgaaaaaa cgccccactt tcacgcgcag
    11881 gaacaacatt gccaaccata ctgccagcat cagcgtattc atgcccaaca cgcccgccaa
    11941 aaccaaaaag aaattcagac cctgattgtc cattagaaga taagtgcctg aaaaaccggt
    12001 aaaaaacgca aacgtcgccg ccgccaccca caaccagaac gaccccgcac gcacacgttc
    12061 caatgtgtcc cgcagcatac ggttcctgtc gatcatctcc gcccgacgga tgattttttc
    12121 ctccgtactg ccgtccacgc ggcgcaaagc ctccgtcgcc tgcacgggat cgccgctgaa
    12181 aataaaaccg ccttcgtcca aaatacggat cagctcaacc agttttcggg atggattcaa
    12241 cataaaatgc cgtctgaaaa taaaaaacag attttaacac acgcattttc aagaatattc
    12301 acagtgtagg caaagagtaa atctcacaca gaagcaaaag tatcggcgta aactgactgc
    12361 ctctactttc ccgaaagatt gtgcgatgta tacaggcgaa cgcttcaata cttacagcca
    12421 tttgagcggt ttgattctgg cggcggcagg tttggcgctg atgctgctga aaaccatagg
    12481 acacggggac ggctaccgta tcttcagcgt atcggtttac ggcatcagcc ttcttctgct
    12541 ctatttgagt tcctcgctgt accacggaat tgcagccgga aaactgaaaa gcattttgaa
    12601 aaaaaccgac cactgcatga tttatgtgct gattgccgga agctacacac cgtttgcact
    12661 ggtttctttg agaaacgggc cgggctggac ggtattttca ctgtcctggc tgctggcggc
    12721 tgcaggaatc gcacaagaac tcaccatcgg acggaaaagc gaaaaacgac tgctgtctat
    12781 tgcgatttat gtcgtcatgg gttggatggt cttggcggta atgaaatccc tgacagcctc
    12841 actcccgctg gcaggactgg cttggctggc ggcaggcggt atgctgtaca gcgtcggcat
    12901 ttactggttt gtaaacgatg aaaaaatccg acacgggcac ggaatctggc atctgttcgt
    12961 attgggcggc agcatcaccc aatttgtcag tgtgtacggt tatgtaatct gaatgccgtc
    13021 tgaaaagcaa aacctcccga tcctgaagat tgggaggttt tctgtttgcc ggacatcagc
    13081 ccttgtcgtg gaactcgtga aattcatact gataggacaa atcccgaccc gcttttttct
    13141 gtgccaaata atcatcataa atggcacgga tttccttacg caacaaaaac agggctatca
    13201 agttcgggat aaccataaag ccgttgaaca tatcggacag gctccaaacc aaatcgactt
    13261 tgccgagcgt acccaaaacg atggcaagca gaaccaatgc gcgatagatg cccaagtgtc
    13321 ttcccctgaa aagaaaacgg atgttggact caccgaaata ataccagccg ataatggtcg
    13381 tcaaggcgaa aaaggtcaga cacacggcaa gcaattgcga accgaagccc ggaaatgcct
    13441 tgttaaaggc aaactgggta accgccgcgc cctgttcgcc cgaaaggttg gcatcagtca
    13501 gcaggataat caatgccgta gccgtacata ccaaaatcgt atcgataaac acaccgacaa
    13561 atgccgccat accttgctgc acaggatgct tcacatcagc ggttgcatgt gcatgcgggg
    13621 tagaacccat acctgcttcg ttggaaaaca gaccgcgcgc cacgccgaaa cgtatcgctt
    13681 cacgcatacc gatacccgca gcaccgccca aaacggcttc aggattgaag gcggcggtaa
    13741 agatgtggtt gaacatcggc acaatatagt cggaaaattc aaacaggata acgacggcgc
    13801 acaaaatata aacaaccgcc ataaacggca cgacaaactg ggcaatattg gcaatacggt
    13861 tcacgccgcc aatcacaacc atgcccgcaa ggacggcaag cacaataccg actgccaaag
    13921 aaggcacatc aaatgcaatg gtaacggcag aagcaatgga gtttgcctgt gtcgcattac
    13981 cgataaagcc caatgcgata atcaacgcaa tggagaaaaa gcccgacagg aaacgcgccg
    14041 cgcccctgcc gattttcgga gtcagaccgt gcgtaatata aaacgccggc ccaccgatgt
    14101 atttgccgtg gctgacgacg cggtatttct gcgccagcag tgcctccgca aaaatcgtgg
    14161 acatccccaa aacggcagaa acccacatcc aaaaaatcgc gcccggcccg cctgcggtga
    14221 tggcggtcgc cacgccggcg acgttgcccg taccgatttg cgcggatatg gcaaccgcca
    14281 acgcctgaaa ctgcgataaa gacttatcgt ctttatcgcc tttggcaaac aagccgccga
    14341 atacagattt gaatcccgca cccagcttgg taatctgcgg cgcaccgaga tacagcgtaa
    14401 aaaacaggcc gatacccaaa agcgcgtaaa tcagcaggta gtcccaaagg aaccgattga
    14461 ctgtacccac cagaacagac aatatatttt ccataaaata aaccttatct tacaattaaa
    14521 atgactgcct tccaaaagac attccaataa ggaaacacgg cgagcagacc gtatttgccg
    14581 caacagatgc cttaaattgt caacaatcgg ggagaagctg cgccatcata ccgtaaaata
    14641 tcgttaatta aaacatttct ttatttttaa gcggaaagcg gaggaaatcg ctttcagacg
    14701 gcatcgacaa cggcacggca taaaacagga tattttgggt acttgcaact tatgttaaaa
    14761 tgccgaccgt aaaaaatctg acaaaaacag attaattatt tgaaataaga aaggaaattt
    14821 atggcaggtc atagcaagtg ggcgaatatc cagcataaaa aagcccgtca ggatgccaaa
    14881 cgcggcaaaa tcttcacccg tttaatcaaa gaaatcaccg ttgcggcgcg tatgggcggc
    14941 ggcgatcccg gcgcaaatcc gcgcctgcgc ctggctttgg aaaaagcagc cgaaaacaat
    15001 atgcccaaag acaatgtgca acgcgccatc gacaaaggca cgggcaactt ggaaggcgtg
    15061 gaatacatcg aattgcgcta cgaaggctac ggcatcggcg gcgcggcttt gatggtggac
    15121 tgcctgaccg acaacaaaac ccgcaccgtt gcggacgtac gccacgcgtt taccaaaaac
    15181 ggcggcaact tgggtaccga cggctgcgtg gcgttcaact tcgtgcatca gggctatttg
    15241 gtattcgaac ccggcgttga cgaagacgcg ctgatggaag cggctttgga agccggtgcg
    15301 gaagacgtgg ttaccaacga cgacggttcc atcgaagtca ttaccgcgcc aaacgattgg
    15361 gcgggcgtaa aatccgcttt ggaggcggca ggttacaaat ccgttgacgg cgacgttacg
    15421 atgcgcgccc aaaacgaaac cgaactctcc ggcgacgatg ccgtcaaaat gcaaaaactg
    15481 attgacgcgc tggaagactt ggacgacgtg caagacgttt acacttccgc cgtattgaat
    15541 ttggactgat acgcagcaca gcagacatac aataaaatgc cgtctgaacc tttcagacgg
    15601 cattgattta tttagccctt gcccacgccc accaaaccgt caggacaacc gccagaaaat
    15661 acgccgcgct ccaaacaggc aaagcaaccc ctaacagata atccggttcg gcacaatttc
    15721 cgaacccgcg cacgacaggc tcgaaccaat caaacaaaga ccagcccttc aagcggaacg
    15781 tccacggcgc accgcacgaa ggagcggttc ccggcggcag cgactgcaac cacaactgat
    15841 atgccgcaac agaaataccc gtaacggccg gaatgctgat aaagacagca ccgaacaaac
    15901 cgcccgccct tcttcttggt ctgcacatca ggacaattgc cgtacacaat gcggttgcca
    15961 aaacgcataa ccgctgactg atacacaaaa cgcaaggctc catacccaaa acatactgtg
    16021 ccgccaaaga accggcaaat gcacagaccg aaacggcaaa cagcagccaa acggcttttc
    16081 taaataacgg ggtcattttc tcaacacacc aatcaaaata ccgatatgcc gattttgctg
    16141 gatatatccc gagatggcaa gggacgaatc gacaccggcg caggtgcgga cgatttcggt
    16201 tttcccgata tacacaagac ctgacaaggg acaaaacggc gatttgcccg cacaatgccc
    16261 gcaaaaaaat acatccggag gatttgaatt tcggcaaatt tagcgaatca aaagtttatt
    16321 tcaatgaaat tatatgattt ttttgaataa gcggattgac aggtttttga aggaatttgt
    16381 taccggatag ccatcgggca agttttttgc aaaatttgaa tcggtcgggt aaattttcaa
    16441 aaaataattg acagcggata agaaacggcg gataattccc gccgtcgagt tgcttgatgc
    16501 agcttgattt ttctcctcta tttctccttt gtagacttgg cacacattca actggatgtg
    16561 tgcatttttt tatctccgct ttttttgaaa tttaattact tttattgttt gaaattccat
    16621 tctttaagaa atttaacaag aaaaacgctt gctttttgac cggaaaagct gcataattcg
    16681 ttccgttagc tggttcgagt agtcagttaa tagtttctcc tatatttctc ctttgtagac
    16741 ttggcacaca ttctattgaa tgtgtgcatt tttttatctg aagcaacaag cctctgtgcg
    16801 tgatgttgtt atgtttcatt taggtgtcaa accgcatacc cggtctgaaa tattcaatcc
    16861 aaatccaaaa ccggattttc tttgacctcc tccatcacaa cataactcct actctccgaa
    16921 gcggcaggca gttgcaatag gatattgcct agcatatccc gataggcaga catatcgggc
    16981 aaacgtactt taatcagata gtcgtattcg cccgacacca agtggcattc cataatttgc
    17041 ggaattttca gcacttcttt tttgaaatct tcgaaaatat tgcccgattt ggattgcagc
    17101 ttcagctcga caaaaaccaa tagcggtttg cccaacagat ggggattgag gtgggcgtga
    17161 tagccggaaa tataatgttc ccgctccaaa cggcgcaccc tctctgtaac gggcgtggtg
    17221 gacaagccta ccttctcggc aagctccgtc atcgggatgc gggcattctg ttggaggatc
    17281 ttaagaatgc ggaaatcgat tttatctagt tctttcattt ggattgcctt gtatttatta
    17341 ttgattttaa caaataga
//
LOCUS       DAWGKF010000026        17008 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.026, whole genome shotgun sequence.
ACCESSION   DAWGKF010000026 DAWGKF010000000
VERSION     DAWGKF010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17008)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17008)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17008
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.026"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            335..979
                     /gene="rplC"
                     /locus_tag="WHR07_000610"
     CDS             335..979
                     /gene="rplC"
                     /locus_tag="WHR07_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HEZ2129858.1"
                     /translation="MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTD
                     GYTAVQVTFGQKKANRVNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVS
                     MFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFP
                     GKRMAGQYGNTKATVQKLEVVRVDAERQLLLVKGAVPGAVNSDVVVRPSVKVGA"
     gene            979..1599
                     /gene="rplD"
                     /locus_tag="WHR07_000611"
     CDS             979..1599
                     /gene="rplD"
                     /locus_tag="WHR07_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HEZ2129859.1"
                     /translation="MELKVIDAKGQVSGSLSVSDALFAREYNEALVHQLVNAYLANAR
                     SGNRAQKTRAEVKHSTKKPWRQKGTGRARSGMTSSPLWRKGGRAFPNKPDENFTQKVN
                     RKMYRAGMATILSQLTRDERLFAIEALTAETPKTKVFAEQVKNLGLEQVLFVTKQLDE
                     NVYLASRNLPNVLVLEAQQVDPYSLLRYKKVIITKDAVAQLEEQWV"
     gene            1596..1910
                     /gene="rplW"
                     /locus_tag="WHR07_000612"
     CDS             1596..1910
                     /gene="rplW"
                     /locus_tag="WHR07_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HEZ2129860.1"
                     /translation="MNQQRLTQVILAPIVSEKSNVLAEKRNQMTFKVLANAAKPEIKA
                     AVELLFGVQVASVTTVTTKGKTKRFGRTLGRRSDVKKAYVSLAAGQELDLEAAAAAAD
                     KE"
     gene            1916..2749
                     /gene="rplB"
                     /locus_tag="WHR07_000613"
     CDS             1916..2749
                     /gene="rplB"
                     /locus_tag="WHR07_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEZ2129861.1"
                     /translation="MAIVKMKPTSAGRRGMVRVVTEGLHKGAPYAPLLEKKNSTAGRN
                     NNGHITTRHKGGGHKHHYRVVDFKRNKDGIPAKVERIEYDPNRTAFIALLCYADGERR
                     YIIAPRGIQAGAVLVSGAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGA
                     SAVLLAKEGAYAQVRLRSGEVRKINVNCRATIGEVGNEEQSLKKIGKAGANRWRGIRP
                     TVRGVVMNPVDHPHGGGEGRTGEAREPVSPWGTPAKGYRTRNNKRTDNMIVRRRYSNK
                     G"
     gene            2756..3034
                     /gene="rpsS"
                     /locus_tag="WHR07_000614"
     CDS             2756..3034
                     /gene="rpsS"
                     /locus_tag="WHR07_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HEZ2129862.1"
                     /translation="MARSLKKGPYVDLHLLKKVDAARASNDKRPIKTWSRRSTILPDF
                     IGLTIAVHNGRTHVPVFISDNMVGHKLGEFSLTRTFKGHLADKKAKKK"
     gene            3043..3372
                     /gene="rplV"
                     /locus_tag="WHR07_000615"
     CDS             3043..3372
                     /gene="rplV"
                     /locus_tag="WHR07_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HEZ2129863.1"
                     /translation="MRVNAQHKNARISAQKARLVADLIRGKDVAQALNILAFSPKKGA
                     ELIKKVLESAIANAEHNNGADIDELKVVTIFVDKGPSLKRFQARAKGRGNRIEKQTCH
                     INVTVGN"
     gene            3382..4074
                     /gene="rpsC"
                     /locus_tag="WHR07_000616"
     CDS             3382..4074
                     /gene="rpsC"
                     /locus_tag="WHR07_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEZ2129864.1"
                     /translation="MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLR
                     QKLANASVGRVVIERPAKSARITIHSARPGVVIGKKGEDIEVLKRDLQVLMGVPVHVN
                     IEEIRRPELDAQIIADGIAQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGA
                     DIARSEWYREGRVPLHTLRANVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHESK
                     QRKAGRRNAAAN"
     gene            4058..4474
                     /gene="rplP"
                     /locus_tag="WHR07_000617"
     CDS             4058..4474
                     /gene="rplP"
                     /locus_tag="WHR07_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEZ2129865.1"
                     /translation="MLQPTRLKYRKQQKGRNTGIATRGNKVSFGEFGLKAVGRGRLTA
                     RQIEAARRAMTRHIKRGGRIWIRVFPDKPITEKPIQVRMGGGKGNVEYYIAEIKPGKV
                     LYEMDGVPEELAREAFELAAAKLPIPTTFVVRQVGQ"
     gene            4474..4665
                     /gene="rpmC"
                     /locus_tag="WHR07_000618"
     CDS             4474..4665
                     /gene="rpmC"
                     /locus_tag="WHR07_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEZ2129866.1"
                     /translation="MKANELKDKSVEQLNADLLDLLKAQFGLRMQNATGQLGKPSELK
                     RVRRDIARIKTVLTEKGAK"
     gene            4665..4928
                     /gene="rpsQ"
                     /locus_tag="WHR07_000619"
     CDS             4665..4928
                     /gene="rpsQ"
                     /locus_tag="WHR07_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEZ2129867.1"
                     /translation="MSETKNVRTLQGKVVSDKMDKTVTVLVERKVKHPLYGKIIRLST
                     KIHAHDENNQYGIGDVVVISESRPLSKTKSWVVSELVEKARSI"
     gene            5150..5518
                     /gene="rplN"
                     /locus_tag="WHR07_000620"
     CDS             5150..5518
                     /gene="rplN"
                     /locus_tag="WHR07_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009124801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEZ2129868.1"
                     /translation="MIQMQTILDVADNSGARRVMCIKVLGGSKRRYASVGDIIKVAVK
                     DAAPRGRVKKGDVYNAVVVRTAKGVRRPDGALIKFDNNAAVLLNNKLEPLGTRIFGPV
                     TRELRTERFMKIVSLAPEVL"
     gene            5530..5853
                     /gene="rplX"
                     /locus_tag="WHR07_000621"
     CDS             5530..5853
                     /gene="rplX"
                     /locus_tag="WHR07_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEZ2129869.1"
                     /translation="MNKIIKGDRVVVIAGKDKGKQGQVVRVLGDKVVVEGVNVVKRHQ
                     KPNPMRGIEGGIITKEMSLDISNIAILNPETNKADRVGIKLIENEGKVKRVRFFKSNG
                     SIIGA"
     gene            5863..6402
                     /gene="rplE"
                     /locus_tag="WHR07_000622"
     CDS             5863..6402
                     /gene="rplE"
                     /locus_tag="WHR07_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEZ2129870.1"
                     /translation="MARLREFYKETVVPELVKQFGYKSVMEVPRIEKITLNMGVGEAV
                     ADKKVMEHAVSDLEKIAGQKPVVTVARKSIAGFKIRDNYPVGCKVTLRRDQMFEFLDR
                     LITIALPRVRDFRGVSGKSFDGRGNYNMGVREQIIFPEIEYDKIDALRGLNITITTTA
                     KTDEEAKALLSLFKFPFKG"
     gene            6405..6710
                     /gene="rpsN"
                     /locus_tag="WHR07_000623"
     CDS             6405..6710
                     /gene="rpsN"
                     /locus_tag="WHR07_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HEZ2129871.1"
                     /translation="MAKKALINRDLKRQALAKKYAAKRAAIKAVINDSNATEEERFEA
                     RLRFQSIPRNAAPVRQRRRCALTGRPRGTFRKFGLGRIKIREIAMRGEIPGVVKASW"
     gene            6726..7118
                     /gene="rpsH"
                     /locus_tag="WHR07_000624"
     CDS             6726..7118
                     /gene="rpsH"
                     /locus_tag="WHR07_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEZ2129872.1"
                     /translation="MSMHDPISDMLTRIRNAQRANKAAVAMPSSKLKCAIAKVLKEEG
                     YIEDFAVSSDVKSILEIQLKYYAGRPVIEQIKRVSRPGLRIYKASSEIPSVMNGLGIA
                     IVSTSKGVMTDRKARSQGVGGELLCIVA"
     gene            7132..7665
                     /gene="rplF"
                     /locus_tag="WHR07_000625"
     CDS             7132..7665
                     /gene="rplF"
                     /locus_tag="WHR07_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEZ2129873.1"
                     /translation="MSRVAKNPVTVPAGVEVKFGTEALVIKGKNGELSFPLHSDVAIE
                     FNDGKLTFVANNSSKQANAMSGTARALVSNMVKGVSEGFEKRLQLIGVGYRAQAQGKI
                     LNLSLGFSHPIVYEMPEGVSVQTPSQTEIVLTGSDKQVVGQVAAEIRAFRAPEPYKGK
                     GVRYVGEVVVMKEAKKK"
     gene            7679..8032
                     /gene="rplR"
                     /locus_tag="WHR07_000626"
     CDS             7679..8032
                     /gene="rplR"
                     /locus_tag="WHR07_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEZ2129874.1"
                     /translation="MDKHTTRLRRARKTRARIADLKMVRLCVFRSNNHIYAQVISAEG
                     DKVLAQASTLEAEVRGSLKFGSNVEAAAIVGKRIAEKAKAAGVEKVAFDRSGFQYHGR
                     VKALAEAARENGLSF"
     gene            8051..8569
                     /gene="rpsE"
                     /locus_tag="WHR07_000627"
     CDS             8051..8569
                     /gene="rpsE"
                     /locus_tag="WHR07_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HEZ2129875.1"
                     /translation="MAKHEIEERGDGLIEKMVAVNRVTKVVKGGRIMAFSALTVVGDG
                     DGRIGMGKGKSKEVPVAVQKAMDQARRSMIKVPLKNGTIHHEVIGRHGATKVFMQPAK
                     EGSGVKAGGPMRLVFDAMGIHNISAKVHGSTNPYNIVRATLDGLSKLHTPADIAAKRG
                     LTVEDILGVNHG"
     gene            8562..8747
                     /gene="rpmD"
                     /locus_tag="WHR07_000628"
     CDS             8562..8747
                     /gene="rpmD"
                     /locus_tag="WHR07_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HEZ2129876.1"
                     /translation="MAEQKKIRVTLVKSLIGTIESHRACARGLGLRRREHTVEVLDTP
                     ENRGMINKISYLLKVES"
     gene            8749..9183
                     /gene="rplO"
                     /locus_tag="WHR07_000629"
     CDS             8749..9183
                     /gene="rplO"
                     /locus_tag="WHR07_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HEZ2129877.1"
                     /translation="MFLNTIQPAVGATHAGRRVGRGIGSGLGKTGGRGHKGQKSRSGG
                     FHKVGFEGGQMPLQRRLPKRGFKSLTASANAQLRLSELESIAVNEIDILVLKQAGLIA
                     STVSNVKVIASGEISKAVALKGIKVTKGARAAIEAVGGKIEM"
     gene            9195..10505
                     /gene="secY"
                     /locus_tag="WHR07_000630"
     CDS             9195..10505
                     /gene="secY"
                     /locus_tag="WHR07_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEZ2129878.1"
                     /translation="MANQQTSSGSSKFGDLKKRLLFLFGALIVFRIGAHIPVPGVDAV
                     ALAKLYESAGNGILGILNMFSGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKAL
                     KKEGEAGRKVITKYTRYGTVLLAILQSLGVASFVFQQGIVVTSSFEFHVSTVVSLVTG
                     TMFLMWLGEQITERGIGNGISLIITAGIASGIPSGIAKLVTLTNQGSMSMLTALFIVF
                     GALLLIYLVVYFESAQRKIPIHYAKRQFNGRAGSQNTHMPFKLNMAGVIPPIFASSII
                     LFPSTLLGWFGSADTNSVLHKIAGLLQHGQLLYMALFAATVIFFCYFYTALVFSPKEM
                     AENLKKSGAFVPGIRPGEQTSRYLEKVVLRLTLFGALYITTICLIPEFLTTVLNVPFY
                     LGGTSLLILVVVTMDFSTQINSYRLTQQYDKLMTRSEMKSFSRK"
     gene            10510..10728
                     /gene="infA"
                     /locus_tag="WHR07_000631"
     CDS             10510..10728
                     /gene="infA"
                     /locus_tag="WHR07_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEZ2129879.1"
                     /translation="MAKEDTIQMQGEILETLPNATFKVKLENDHIVLGHISGKMRMHY
                     IRISPGDKVTVELTPYDLTRARIVFRAR"
     gene            10749..10862
                     /gene="rpmJ"
                     /locus_tag="WHR07_000632"
     CDS             10749..10862
                     /gene="rpmJ"
                     /locus_tag="WHR07_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006232360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HEZ2129880.1"
                     /translation="MRVQPSVKKICRNCKIIRRNRVVRVICTDLRHKQRQG"
     gene            10928..11290
                     /gene="rpsM"
                     /locus_tag="WHR07_000633"
     CDS             10928..11290
                     /gene="rpsM"
                     /locus_tag="WHR07_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEZ2129881.1"
                     /translation="MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTK
                     AKDLDETQLDALRDQVAKYEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRT
                     RTNARTRKGPRKAIAGKK"
     gene            11310..11705
                     /gene="rpsK"
                     /locus_tag="WHR07_000634"
     CDS             11310..11705
                     /gene="rpsK"
                     /locus_tag="WHR07_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEZ2129882.1"
                     /translation="MAKANTASRVRKKVRKTVSEGIVHVHASFNNTIITITDRQGNAL
                     SWATSGGAGFKGSRKSTPFAAQVAAEAAGKVAQEYGVKNLEVRIKGPGPGRESSVRAL
                     NALGFKITSITDVTPLPHNGCRPPKKRRI"
     gene            11725..12345
                     /gene="rpsD"
                     /locus_tag="WHR07_000635"
     CDS             11725..12345
                     /gene="rpsD"
                     /locus_tag="WHR07_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004282443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEZ2129883.1"
                     /translation="MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGAK
                     KPRLSDYGLQLREKQKIRRIYGVLERQFRRYFAEADRRKGSTGELLLQLLESRLDNVV
                     YRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVRIQEALG
                     LATQIGLPGWVSVDADKLEGVFKNMPDRSELTGDINEQLVVEFYSK"
     gene            12371..13357
                     /gene="rpoA"
                     /locus_tag="WHR07_000636"
     CDS             12371..13357
                     /gene="rpoA"
                     /locus_tag="WHR07_000636"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEZ2129884.1"
                     /translation="MQNSTTEFLKPRQIDVNTFSATRAKVSMQPFERGFGHTLGNALR
                     RILLSSMNGFAPTEVAIAGVLHEYSTVDGIQEDVVDILLNIKGIVFKLHGRSQVQLVL
                     KKSGSGVVSAGDIELPHDVEILNPGHVICHLADNGQIEMEIKVEQGRGYQSVSGRQVV
                     RDENRQIGAIQLDASFSPISRVSFEVEPARVEQRTDLDKLVLDIETDGSIDPEEAVRS
                     AARILIDQMSIFADLQGTPVEEVEEKAPPIDPVLLRPVDDLELTVRSANCLKAEDIYY
                     IGDLIQRTETELLKTPNLGRKSLNEIKEVLASKGLTLGSKLEAWPPVGLEKP"
     gene            13381..13749
                     /gene="rplQ"
                     /locus_tag="WHR07_000637"
     CDS             13381..13749
                     /gene="rplQ"
                     /locus_tag="WHR07_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEZ2129885.1"
                     /translation="MRHRNGNRKLNRTSSHRAAMLRNMANSLLTHETIVTTLPKAKEL
                     RRVVEPLITLGKKPSLANRRLAFDRTRDRDVVVKLFGDLGPRFTARNGGYVRVLKYGF
                     RKGDNAPLALVELVDKPAAE"
     gene            13896..14609
                     /gene="minC"
                     /locus_tag="WHR07_000638"
     CDS             13896..14609
                     /gene="minC"
                     /locus_tag="WHR07_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HEZ2129886.1"
                     /translation="MMVYIMNAFDIKSTKMDVLSISLHTSDLFDLEDVLVKLGKKFQE
                     SGVVPFVLDVQEFDYPESLDLAALVSLFSRHGMQILGLKHSNERWAAAAMKYHLLFCL
                     SHSENVKELGQVEVQNTEDGQKARKTVLITSPVRTGQQVYAEDGDLIVTGAVSQGAEL
                     IADGNIHIYAPMRGRALAGAKGDTSARIFIHSMQAELVSVAGIYRNFEQDLPNHLHKQ
                     PVQILLQDNRLVISAIGSE"
     gene            14637..15452
                     /gene="minD"
                     /locus_tag="WHR07_000639"
     CDS             14637..15452
                     /gene="minD"
                     /locus_tag="WHR07_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HEZ2129887.1"
                     /translation="MAKIIVVTSGKGGVGKTTTSASIATGLALRGYKTAVIDFDVGLR
                     NLDLIMGCERRVVYDLINVIQGEATLNQALIKDKNCENLFILPASQTRDKDALTREGV
                     EKVMQELSGKKMGFEYIICDSPAGIEQGALMALYFADEAIVTTNPEVSSVRDSDRILG
                     ILQSKSHKAEQGGSVKEHLLITRYSPERVAKGEMLSVQDICDILHIPLLGVIPESQNV
                     LQASNSGEPVIHQDSVAASEAYKDVIARLLGENREMRFLEAEKKSFFKRLFGG"
     gene            15456..15719
                     /gene="minE"
                     /locus_tag="WHR07_000640"
     CDS             15456..15719
                     /gene="minE"
                     /locus_tag="WHR07_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HEZ2129888.1"
                     /translation="MSLIEFLFGRKQKTATVARDRLQIIIAQERAQEGQAPDYLPTLR
                     KELMEVLSKYVNVSLDNIRISQEKQDGMDVLELNITLPEQKKV"
     gene            15723..16643
                     /gene="oxyR"
                     /locus_tag="WHR07_000641"
     CDS             15723..16643
                     /gene="oxyR"
                     /locus_tag="WHR07_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator OxyR"
                     /protein_id="HEZ2129889.1"
                     /translation="MTLTELRYIVAVAQERHFGRAARRCFVSQPTLSIAIKKLEEELA
                     VSLFDRSSNDIITTEAGERIVAQARKVLEEAELIRHLANEEQNELEGAFKLGLIFTVA
                     PYLLPKLIVSLRRTAPKMPLMLEENYTHTLTESLKRGDVDAIIVAEPFQEPGIVTEPL
                     YDEPFFVIVPKGHSFEELDAVSPRMLGEEQVLLLTEGNCMRDQVLSSCSELAAKQRIQ
                     GLTNTLQGSSINTIRHMVASGLAISVLPATALTENDHMLFSIIPFEGTPPSRRVVLAY
                     RRNFVRPKALSAMKAAIMQSQLHGVSFIRD"
     gene            complement(16640..16831)
                     /locus_tag="WHR07_000642"
     CDS             complement(16640..16831)
                     /locus_tag="WHR07_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129890.1"
                     /translation="MLIHYTWHCIGTDENIHSDAKVEYLQDGSFRGDAILKIDDDGNI
                     LAYRVVGSGKWRFENNACA"
BASE COUNT         4668 a         3218 c         4217 g         4905 t
ORIGIN      
        1 gggagggaaa ggaattttgc aaaggtccca gcatacgaaa actaccatct caaagaaata
       61 atggatgcag tcatcaacca tattccggtt tgtcggagaa agatgcatac gctgtgatga
      121 ccggataccg accctttaaa agagtccgac cctatgccgt ctgaaaattc aaaacgcttc
      181 agacggcata ttgaagatat ttctgatatt tctgttgata tttctttgac ttgtcagata
      241 taatgccgag cttggtacat ttgtgccaag tttaactttg tctgaaagac aggccaatcg
      301 tagcctgtcc ctttacttta aaaggaaaat aatcatgact ttaggtctgg ttggacgcaa
      361 agttggtatg acccgcgtgt tcgacgaaca gggtgtttct gttccggtaa ccgttttgga
      421 tatgtctgcc aaccgcgtta cacaagtaaa atccaaagat actgacggct atactgccgt
      481 tcaagttacc tttggtcaga aaaaagccaa tcgtgtcaat aaagccgaag ccgggcactt
      541 tgcaaaagca ggtgttgaag ccggtcgcgg tttgattgag tttgctttga ctgaagaaaa
      601 actggctgaa ttgaaagccg gtgacgaaat caccgtttct atgtttgaag tcggccagct
      661 ggtcgatgta accggtacct ctaaaggtaa aggtttctcc ggtacgatca aacgtcataa
      721 cttcggtgcc caacgtactt cccacggtaa ctcccgctct caccgcgttc caggctctat
      781 cggtatggcg caagacccgg gtcgcgtgtt ccccggtaaa cgcatggccg gccaatacgg
      841 caacaccaaa gcaactgttc aaaaattgga agttgtccgt gttgatgcag aacgccaact
      901 gctgttggtt aagggtgctg ttccaggtgc ggtcaacagc gatgttgtag ttcgtcccag
      961 cgtgaaagta ggtgcgtaat ggaattgaaa gtaattgacg ctaaaggaca agtttcaggc
     1021 agtctgtctg tttctgatgc tttgttcgcc cgcgaataca atgaagcgtt ggttcatcag
     1081 ctggtaaatg cctatttggc aaacgcccgc tccggcaatc gcgctcaaaa aacccgtgcc
     1141 gaagtaaaac actcaaccaa aaaaccatgg cgtcaaaaag gtaccggccg tgcccgttcc
     1201 ggtatgactt cttctccgct gtggcgtaaa ggtggtcgcg cgttcccgaa caaacccgac
     1261 gaaaacttca ctcaaaaagt aaaccgcaaa atgtaccgtg ccggtatggc gactattctg
     1321 tcccaattga ctcgtgacga gcgtttgttt gcgattgagg cgttgactgc cgaaactcct
     1381 aaaaccaaag tttttgccga acaagtgaaa aatctgggtc tggagcaagt gttgtttgta
     1441 accaaacagc tcgacgagaa tgtttacttg gcttcacgca acttgccaaa cgtgttggtt
     1501 ttggaagctc aacaagttga tccttacagc ttgctgcgtt acaaaaaagt aatcatcact
     1561 aaagatgcag ttgcacaatt agaggagcaa tgggtatgaa tcaacaacgt ttgactcaag
     1621 tgattttggc acctatcgtt tctgaaaaaa gcaacgtatt ggctgaaaaa cgcaaccaaa
     1681 tgacgtttaa agttttggca aatgcagcca aacctgaaat caaagcggct gtcgagctgc
     1741 tgttcggtgt tcaagttgct tctgtaacta ccgttacaac taaaggcaaa actaagcgtt
     1801 ttggtcgtac tttgggccgc cgcagcgatg ttaaaaaagc ttatgtaagc ttggctgccg
     1861 gtcaagagtt ggatttggaa gccgctgctg cagctgcaga taaggaataa acaaaatggc
     1921 aatcgttaaa atgaagccga cctctgcagg ccgtcgcggc atggttcgcg tggtaacaga
     1981 aggtttgcac aaaggtgcac cttatgcacc cttgcttgaa aagaaaaatt ctactgccgg
     2041 ccgtaacaat aatggtcata tcaccacccg tcacaaaggc ggcggtcata aacaccatta
     2101 ccgtgttgta gactttaaac gtaacaaaga cggcattcct gctaaagtag agcgtatcga
     2161 atacgatcct aaccgtactg ccttcatcgc actgttgtgc tatgcagacg gcgagcgtcg
     2221 ttacatcatt gctcctcgcg gtattcaagc cggtgctgta ttagtttccg gcgctgaagc
     2281 tgccatcaaa gtaggcaaca ccctgccgat ccgcaacatt cccgttggta cgactatcca
     2341 ctgtatcgaa atgaaacccg gtaaaggtgc tcaaatcgca cgttctgccg gtgcttctgc
     2401 ggtattgctg gctaaagaag gcgcgtacgc tcaagtccgt ctgcgctctg gcgaagtccg
     2461 taaaatcaac gtaaattgcc gtgcgaccat cggtgaagtt ggtaacgaag agcaaagcct
     2521 gaaaaaaatc ggtaaagccg gtgccaaccg ttggcgcggt attcgtccga ccgtacgcgg
     2581 tgttgtcatg aatcctgtcg atcacccgca tggtggtggt gaaggccgta cgggcgaggc
     2641 ccgcgaaccg gtcagcccat ggggtactcc tgctaaaggc taccgcactc gtaataacaa
     2701 acgcacggat aacatgattg ttcgtcgccg ttactcaaat aaaggttaat ttagtatggc
     2761 tcgttcattg aaaaaaggcc catatgtaga cctgcatttg ctgaaaaaag tagatgctgc
     2821 tcgcgcaagc aacgacaaac gcccgattaa aacctggtct cgtcgttcta ccattctgcc
     2881 tgattttatc ggtctgacca ttgctgtgca caacggccgc acccatgtgc ctgtgtttat
     2941 cagcgacaat atggttggtc ataaattagg cgaattctca ttgacccgta cctttaaagg
     3001 ccacttggcc gataaaaagg ctaaaaagaa ataaggtgaa tcatgagagt aaatgcacaa
     3061 cataaaaatg cccgtatctc tgctcaaaag gctcgtttgg tagctgattt gattcgtggt
     3121 aaagacgttg cccaagcttt gaatattttg gctttcagtc ctaaaaaagg tgccgagctg
     3181 attaaaaaag tattggagtc agctattgct aatgccgagc acaataacgg tgcggacatt
     3241 gatgaactga aagtggtaac tatctttgtt gacaaaggcc caagcttgaa acgttttcaa
     3301 gctcgcgcca aaggtcgcgg taaccgcatc gaaaaacaaa cttgtcatat caatgtgaca
     3361 gtgggtaact aaggaaaagc tatgggacaa aagattaacc ctacaggctt tcgcctggcg
     3421 gtaactaaag actgggcttc aaaatggttt gctaaaagca ccgacttttc tactgttttg
     3481 aagcaggata tcgatgttcg caattatttg cgtcaaaaat tggccaatgc ttcggttggt
     3541 cgagtggtta ttgaacgccc tgcaaaatct gcacgcatta ccattcactc cgctcgtccg
     3601 ggtgtggtta tcggtaaaaa aggtgaggat atcgaggttt tgaaacgtga cttgcaagtc
     3661 ttgatgggtg tacctgttca tgtaaatatt gaagagatcc gccgtcctga gttggatgct
     3721 caaattattg ctgacggtat tgcccagcag ttggaaaagc gcgttcaatt ccgtcgtgct
     3781 atgaaacgag caatgcaaaa tgcaatgcgt tctggtgcta aaggcattaa gattatgact
     3841 tcaggccgtc tgaatggtgc ggatattgcc cgtagcgaat ggtatcgtga aggtcgcgtg
     3901 ccattgcata ctttacgtgc aaatgtagat tatgcaacca gcgaagcgca caccacatat
     3961 ggtgtattgg gtctgaaagt ttgggtttat acggaaggca atattaaatc ttccaaacct
     4021 gaacatgaga gtaaacaaag aaaggcaggt agacgtaatg ctgcagccaa ctagactgaa
     4081 ataccgtaag caacaaaagg gtcgcaatac tggcatcgct actcgcggta ataaggtaag
     4141 tttcggtgag ttcggcttga aagccgtagg tcgtggtcgt ttgactgccc gtcaaatcga
     4201 agctgctcgt cgtgcaatga cccgtcatat caaacgtggt ggtcgtattt ggattcgtgt
     4261 attccctgat aaaccgatta ctgaaaagcc tattcaagtt cgtatgggtg gcggtaaagg
     4321 taacgtggaa tattacattg ccgaaattaa accaggtaaa gtgttgtatg aaatggatgg
     4381 cgttccagag gaactggctc gtgaagcatt cgagttggct gctgccaaat tgcctattcc
     4441 tacaaccttt gtagtaagac aggtgggtca ataatgaaag caaatgaatt gaaagacaaa
     4501 tccgttgagc agttgaatgc agatttgttg gacttgttga aagctcagtt tggcttacgt
     4561 atgcaaaacg ctaccggtca attaggcaaa ccaagtgaat tgaaacgtgt acgtcgcgat
     4621 attgctcgta ttaaaaccgt tttaactgaa aaaggtgcta agtaatgagc gaaactaaaa
     4681 atgttcgtac tttgcaaggc aaagtagtaa gcgacaaaat ggataaaacc gtaacagtat
     4741 tggttgagcg taaagtaaaa catccgctgt atggtaagat tattcggtta tctactaaaa
     4801 tccatgccca tgatgaaaat aatcaatatg gaattggtga tgtggttgtt atatcggaat
     4861 cccgtccatt gtcaaaaact aaatcttggg ttgtcagtga gctggttgag aaagcacgtt
     4921 ctatttaaga attaaagcaa cgtgcttgga atgggaaacg aagtattgca gcaaatttaa
     4981 tttgcgtgta aacttcgttt cctgtctttc agtttcttct ggaagtttct tccctttcgg
     5041 ggtccaagac tggtttactt gaaccgcaag gtttcattta ataagcagcg gctttgctgt
     5101 aagttatctg aaagtggtaa attaagttgg ttaatttaaa ggtaataaca tgattcaaat
     5161 gcagaccatc ttagatgtgg ctgataactc tggtgcgcgt cgcgtaatgt gtatcaaggt
     5221 attgggcgga tctaagcgtc gctacgcttc tgttggcgat attattaaag tggcagttaa
     5281 agatgcggct ccgcgtggcc gtgtcaaaaa aggcgatgta tataatgcgg tagttgttcg
     5341 tactgctaag ggtgtacgtc gtcctgatgg tgcgttaatt aaattcgata acaatgccgc
     5401 cgtgttactg aataataaac ttgaaccttt gggtactcgt atctttggtc cggtaacccg
     5461 tgaattgcgt actgagcgat ttatgaaaat cgtttcattg gcacctgaag tattataagg
     5521 aatggcacga tgaataaaat cattaaaggc gatagggttg tagtaattgc tggtaaggat
     5581 aaaggtaagc agggtcaagt agttcgagtg ttgggtgata aagttgttgt tgagggcgtt
     5641 aatgttgtaa aacgccatca aaaacctaat ccaatgcgtg gcattgaggg cggtattatt
     5701 actaaagaaa tgtctttgga tatttctaat atcgcaatcc tgaatccgga aactaataaa
     5761 gcggaccgtg ttggtattaa gctgattgaa aatgaaggca aagttaaacg cgttcgtttc
     5821 ttcaaatcaa atggctctat cattggggca taaggagata acatggctcg gttgagagag
     5881 ttttataaag agacagttgt tcctgaattg gttaaacaat ttggttacaa atcagtaatg
     5941 gaagtcccgc gtattgaaaa aatcaccttg aatatgggtg tgggtgaggc tgttgctgac
     6001 aaaaaagtta tggaacatgc tgtttccgat ttagagaaaa ttgccggtca aaaaccggtt
     6061 gttactgttg cccgtaaatc tatcgcaggt tttaaaatcc gtgataacta tccggttggt
     6121 tgcaaagtaa cattgcgtcg tgatcaaatg tttgaattct tggatcgttt gattactatt
     6181 gcattacctc gcgtacgtga cttccgtggt gtgagcggta aatcatttga tggccgtggc
     6241 aattacaata tgggtgttcg tgagcaaatt atttttccgg aaattgaata cgataaaatt
     6301 gatgctttgc gtggtttgaa tattactatt actactacag caaaaaccga tgaggaagcg
     6361 aaagctttat tgtcattgtt taaatttccg ttcaaaggat aatcatggct aagaaagcac
     6421 ttattaatcg tgatctgaaa cgtcaagctt tggctaaaaa atatgcggct aaacgcgcgg
     6481 caattaaagc ggtaatcaat gattcgaatg caactgagga agagcgtttt gaggctcgtt
     6541 tgaggtttca atccattcct cgtaatgcgg cacctgtgcg tcaacgtcgt cgttgtgctt
     6601 tgacaggtcg ccctcgtggt actttccgta aatttggttt gggtcgtatt aaaatccgtg
     6661 aaatcgccat gcgtggcgaa attccgggtg ttgttaaagc cagctggtaa taggagtaat
     6721 taagaatgag tatgcatgat cctatttccg atatgttgac tcgtatccgc aatgcgcaac
     6781 gtgctaataa agcagcagtt gcaatgcctt cttcaaaatt aaagtgtgct attgcaaagg
     6841 tattgaaaga agaaggatat attgaggact tcgcagtttc atctgacgta aagtctatat
     6901 tggaaattca attaaaatac tatgcaggtc gtcctgtaat tgaacaaatc aagcgtgtat
     6961 ctcgccccgg tttgcgtatt tataaagcgt ctagtgagat tccaagtgtt atgaatggct
     7021 tgggtattgc tattgttagt acttctaaag gtgtaatgac tgatcgtaaa gcacgttctc
     7081 aaggtgttgg tggtgagttg ttatgcattg tagcctagtg gaggaaaaga aatgtcacgt
     7141 gtcgcaaaaa acccagtgac tgttcccgct ggtgtagaag taaaatttgg aacagaggca
     7201 ttagttatta agggtaagaa cggtgaattg tcttttcctt tgcattctga tgtagccatt
     7261 gaatttaatg atggcaaatt gacttttgtt gcgaataaca gcagtaaaca agcaaatgca
     7321 atgtctggta ctgctcgcgc attagtcagc aatatggtta aaggtgtttc agaaggtttt
     7381 gagaaaagat tgcaattgat aggtgtgggt tatcgtgctc aagcacaagg taaaatcttg
     7441 aatctgtctt tgggtttttc tcatccgatc gtatatgaaa tgcctgaagg tgtctccgtt
     7501 caaactccta gccaaacaga gattgtttta accggctcgg ataaacaagt tgttggtcaa
     7561 gttgctgctg agattcgtgc gttccgtgct cctgagcctt ataaaggtaa aggtgttcgc
     7621 tatgtaggag aagtagtggt aatgaaagaa gccaagaaaa aataattgag gttcactaat
     7681 ggataaacat acaacccgac tccgtcgtgc acgcaaaacc cgtgctcgta ttgcggactt
     7741 gaaaatggta agattatgtg tgttccgaag caataatcat atttatgctc aagtaattag
     7801 tgctgaaggt gataaagtat tggctcaagc ctctacattg gaagctgagg tgcgcggtag
     7861 tctgaaattt ggaagcaatg ttgaagcagc tgcaatagtt ggtaaacgta tcgctgagaa
     7921 ggctaaagca gcaggtgtag aaaaggttgc ttttgatcgt tcaggtttcc aatatcacgg
     7981 tcgtgtgaag gctttggctg aagctgctcg tgaaaatggt ttaagcttct aaatatttgg
     8041 agactttcag atggcaaaac atgaaattga agaacgcggt gacggtctga ttgaaaagat
     8101 ggtcgcagtt aaccgtgtaa ccaaagtagt taaaggtggt cgcattatgg ctttctctgc
     8161 gctaactgtt gttggtgatg gagatggtcg tattggtatg ggtaaaggta agtcaaaaga
     8221 agtgcctgtt gcagtccaaa aggcgatgga tcaagcacga cgctctatga ttaaggtacc
     8281 attaaaaaat ggtacgattc atcatgaggt tattggtcga catggtgcta ctaaagtatt
     8341 tatgcagcct gctaaagagg gtagtggcgt aaaagccggt ggacctatgc gtttggtttt
     8401 tgatgctatg ggcattcata atatctccgc caaagtgcac ggatctacta acccatataa
     8461 tatcgtacgt gcaacattag atggtttgtc taagttgcat actcctgctg atatcgcagc
     8521 caaacgtggc ttgacagtgg aagacatttt gggagttaac catggctgaa caaaaaaaga
     8581 ttagggttac attggttaaa agcctgattg gtacaattga atctcatcgt gcatgtgcac
     8641 gcggtttagg tttgcgtcgt cgcgagcata cggtagaggt tttagatacc cctgaaaacc
     8701 gtggtatgat taataaaatc agctacttgt tgaaagtgga gtcttgatat gtttttgaat
     8761 acaattcaac ctgctgttgg tgctacgcat gctggtcgtc gtgttggacg cggtattggt
     8821 agtggtcttg gcaaaacggg tggtcgtggt cataaaggtc aaaagagccg gtctggtggg
     8881 tttcataagg tgggtttcga gggtggtcaa atgcccttgc aacgacgcct ccctaaaaga
     8941 ggttttaaat ctttaacagc atcagctaat gcacagcttc gtttaagtga actggaatca
     9001 attgctgtta atgagattga tattttggtc ttaaagcaag cgggtctgat tgcatctaca
     9061 gtctctaatg ttaaagttat tgcttctggt gaaatttcta aggcagttgc tttgaagggt
     9121 attaaagtta ccaaaggtgc gagagctgct atcgaggctg ttggtggtaa gattgaaatg
     9181 taaggtttaa tattgtggct aatcaacaaa cgtcatcagg ttcatccaaa tttggagatc
     9241 ttaagaaacg tcttttgttt ctatttggag cattgattgt ttttcgaatt ggtgcccata
     9301 tacccgtacc tggagttgat gctgttgctt tagctaaatt atacgaaagc gctggaaacg
     9361 gcatcctggg aatattgaat atgttttccg gtgggtcgtt agagcgcttt agtatatttg
     9421 caataggaat tatgccatat atttcagctt ctattattgt acagctcgct tctgaaattt
     9481 tgccatcatt gaaggcttta aaaaaagaag gggaggctgg tagaaaggta attacgaaat
     9541 atactaggta tggtactgtt ttgttagcaa ttcttcaaag tctaggtgtt gcatctttcg
     9601 tatttcagca aggaattgtt gtaacaagtt catttgagtt tcatgtttcc acggtagttt
     9661 ctttggtaac gggaaccatg tttcttatgt ggcttgggga gcaaattact gaaaggggta
     9721 tcgggaacgg tatttcttta atcattacgg caggtattgc ttcaggtatt ccttcgggta
     9781 ttgcaaagct ggttacactg acgaaccaag gttctatgag catgcttacg gcgttgttta
     9841 ttgtatttgg tgccttatta ttaatttatt tggttgtata ctttgaaagt gcacagcgga
     9901 agattcctat tcattatgca aaacgccagt ttaatggtag ggcgggtagt caaaatacgc
     9961 atatgccttt caagttgaat atggctggtg ttattccccc aatttttgct tccagtatta
    10021 ttctatttcc atctactctt ttaggttggt ttggttcggc tgatacaaat agtgttttgc
    10081 acaaaatagc tggattgtta caacacggtc aattgctgta tatggcttta tttgcagcga
    10141 cagttatttt cttttgttat ttttatacgg ctttggtttt tagccctaaa gaaatggcag
    10201 agaatttaaa aaagagtggt gcttttgttc ctgggattag acctggtgag cagacctcta
    10261 ggtatttaga aaaagttgta ttacgtttga cattgtttgg agctctttat attacaacta
    10321 tttgtttaat tccagagttc ttaactacgg ttttaaatgt acctttttat ttgggtggca
    10381 cgtctttgtt gattctagtt gttgtaacga tggattttag tacacaaata aattcgtata
    10441 ggcttactca acagtatgat aagttaatga ctcgttcaga aatgaaatca ttttctcgga
    10501 aatagaatta tggcgaaaga agatactatc caaatgcaag gtgaaattct tgaaacttta
    10561 cctaatgcaa catttaaagt aaaacttgag aatgaccata ttgtattggg tcatatttct
    10621 gggaagatgc ggatgcatta cattcgtatt tctccgggag ataaggtcac agtagagctg
    10681 acaccttatg atctaactag ggctcgaatc gttttcagag caagataaac caataaaagg
    10741 aaaataaaat gcgtgtacaa ccatctgtta agaaaatttg ccgaaattgc aagattattc
    10801 gtcgaaatcg tgtagttcgt gtaatttgta ctgatctccg tcacaaacag cgtcaaggtt
    10861 aatggaatat ttcttttaat gtgattctgt gatatagtga cacactttgc cctaaaaagg
    10921 aaaaaatatg gctcgtattg caggggtaaa tatccctaat aacgcacaca tcgtaattgg
    10981 tcttcaggct atttacggta ttggtgctac tcgtgctaaa ttgatttgtg aggctgcaaa
    11041 tattgcgcct gatactaaag caaaagattt ggacgagact caattagatg ctttgcgtga
    11101 ccaagttgcc aagtatgaag tagaaggtga tttgcgtcgt gaggtaacta tgagtatcaa
    11161 gcgattgatg gacatgggct gctatcgtgg cttccgtcat cgtcgcggct taccatgccg
    11221 cggtcaacgc actcgtacaa atgcgcgtac ccgcaaaggt ccgcgtaaag cgattgctgg
    11281 taagaaataa attttaagga attttattaa tggctaaagc aaacacagct tcacgtgtac
    11341 gtaaaaaagt acgtaaaacc gtgagtgagg gtattgtgca cgttcatgca tctttcaaca
    11401 ataccatcat tacaatcact gaccgtcaag gcaatgcgtt gtcttgggct acctctggcg
    11461 gcgctggttt taaaggttct cgtaaaagta caccatttgc agcacaagtt gcagcagaag
    11521 cagctggtaa agttgcccaa gagtatggcg ttaaaaattt agaggttcgt attaaaggtc
    11581 caggtccagg tcgcgaatcc tctgtacgtg ctttgaatgc tcttggtttc aagattacca
    11641 gcattactga cgttaccccg ttgcctcata acggttgccg tccgcctaaa aaacgtcgta
    11701 tttaatattg gagtgatttg aaacatggca cgttatattg gccctaaatg taagttggca
    11761 cgtcgcgaag gtacggattt gtttttgaag agtgcgcgcc gctctttgga ttctaaatgt
    11821 aaaattgatt ccgctcctgg tcagcatggt gcaaaaaaac cgcgtttgtc agactatggt
    11881 ttgcagttgc gtgaaaaaca aaaaatccgc cgtatttatg gcgtattaga acgtcagttc
    11941 cgtcgttatt tcgcagaagc tgatcgtcgt aaaggttcta ccggcgagtt gctgttgcag
    12001 ttgctggaat ctcgtttgga taatgtcgtt tatcgtatgg gtttcggttc tacccgagct
    12061 gaagcaagac agcttgtttc tcataaggcg atagttgtga atggacaagt tgtcaatatt
    12121 ccttctttcc aagtgaaagc tggtgatgtt gtctcagttc gtgaaaaagc caaaaaacag
    12181 gtacgtattc aagaagcatt gggtttggca actcaaatcg gcttgccggg ttgggtttct
    12241 gtagatgcgg ataaacttga gggtgtgttc aaaaacatgc cggatcgctc ggaattgacc
    12301 ggtgatatta atgaacagct ggtggtagag ttctactcta aataatgcta gctcagtgag
    12361 ggacagttaa atgcagaata gcacaaccga atttttgaaa cctcgtcaaa ttgatgtaaa
    12421 tactttttct gcaactcgtg caaaagtatc tatgcagcca tttgaacgtg gtttcggtca
    12481 taccttaggt aatgctttgc gccgtatctt actgtcatcc atgaatggtt ttgctcctac
    12541 tgaagtagct attgccggtg tattacacga atattctact gttgatggta ttcaggaaga
    12601 tgttgttgac attttgctga atattaaagg tattgtgttt aaactccatg gtcgtagcca
    12661 agttcaactt gtgttgaaga aatcaggttc aggtgtcgta tctgccggtg atattgagtt
    12721 gccgcatgat gtagaaattc tgaatcctgg tcatgtcatt tgtcatttgg ctgataacgg
    12781 tcaaattgag atggaaatta aagtagagca aggtcgtggt tatcaatctg tttcaggtcg
    12841 tcaggtagtt cgtgatgaga accgtcagat tggtgcaatc cagttggatg cgagcttttc
    12901 gcccatcagc cgtgttagct ttgaggttga acctgcacgt gtagagcagc ggacggatct
    12961 tgataagttg gttttggata tcgaaaccga cggttctatt gatcctgagg aagctgtacg
    13021 cagtgcggca cgtattttga ttgatcagat gtctattttt gctgatttgc agggtacgcc
    13081 tgtggaggag gttgaagaaa aagcacctcc tatcgaccct gttcttttgc gtccggtgga
    13141 tgatctggaa ttgacagtac gttcagctaa ttgtttgaaa gctgaggata tttattatat
    13201 tggcgatttg attcaacgca ctgaaaccga gcttcttaaa acgccgaatt tgggacgtaa
    13261 atctttgaat gagattaagg aagtattggc atctaaaggt ttgacactgg gttctaagtt
    13321 ggaagcatgg ccacctgtag gcttggaaaa gccttaatga agaattaaag gataattgat
    13381 atgcgtcatc gtaatggcaa tcgcaaatta aaccgtacca gcagtcatcg tgctgcaatg
    13441 ctgcgtaata tggcgaattc attattgact cacgaaacta ttgtaacaac tctgcctaag
    13501 gccaaggaat tgcgccgtgt agtagagccg ttgattacat tgggtaaaaa gccgtcattg
    13561 gcaaaccgcc gtttggcatt tgaccgtact cgcgaccgtg atgttgtagt aaaactgttt
    13621 ggcgatttgg gtcctcgttt tactgctcgt aacggtggtt atgttcgggt gttgaaatac
    13681 ggattccgta aaggtgataa tgcacctctg gcactggttg aattggttga caaaccggct
    13741 gctgagtaat tttagtcata taacgccatc tgccgaaaag caggtggcgt tatttttgca
    13801 atatctgata ggtaataggg tattggctat catgtttaaa atattaattg aatagctaag
    13861 gtttgcgcgg taaacttaca tcattaaaaa attctatgat ggtttatata atgaatgctt
    13921 tcgatataaa gtcgacaaag atggacgtat tgtctatatc tttgcatacg tcagacttgt
    13981 ttgatttgga agatgtgctg gtcaaattgg gcaagaagtt tcaagagtct ggtgttgttc
    14041 catttgtgct ggatgttcaa gagtttgatt atcccgagtc tttggatctt gctgcattgg
    14101 tttcgttgtt ttcaaggcat ggtatgcaaa ttttgggtct gaagcattct aatgaacgtt
    14161 gggctgctgc ggctatgaag tatcatttgc tgttttgtct gtctcattcg gaaaatgtta
    14221 aagaactggg tcaggttgag gtgcagaaca cggaggatgg tcagaaagca aggaaaacag
    14281 tattgattac atcccctgtc cgtaccggtc agcaggttta tgccgaagat ggcgatttga
    14341 ttgttacggg ggcggtcagc cagggggcgg aattgattgc ggatggcaat atacatattt
    14401 atgcgccgat gagggggcgt gctttggccg gtgccaaggg tgatacttct gcccgcatat
    14461 ttatccactc catgcaggca gaactggttt ctgtggcggg tatttaccgt aattttgaac
    14521 aggatttgcc gaaccatctg cacaagcagc cggtacagat attgttgcag gataaccgat
    14581 tggttatcag tgcaattggc tcagagtaat tgtttgatat ttaaaaagga aatattgtgg
    14641 caaaaattat tgtagtaact tcaggtaagg gcggtgtcgg taaaacgact accagtgcca
    14701 gtattgcgac aggtttggca ttacgcggat ataaaactgc ggtaattgat tttgatgtgg
    14761 gtttgcgtaa cctcgacctc attatgggtt gcgagcgtcg tgtcgtttat gacctgatca
    14821 atgtcattca gggggaggcg acgctcaacc aagctttgat taaagataaa aattgtgaaa
    14881 acctgtttat tttgccggct tcccagactc gggataaaga cgctttgaca cgcgagggcg
    14941 tagaaaaagt gatgcaggag ctgtccggca agaaaatggg ctttgagtat attatttgcg
    15001 actctcctgc cggtattgag cagggtgcat tgatggcgtt gtattttgct gatgaagcca
    15061 ttgtaacgac caatcctgag gtttccagtg tgcgtgactc cgacaggatt ttgggaattt
    15121 tgcaaagcaa atcccataag gcagagcaag gcggttcggt taaagaacat ctgttgatta
    15181 cgcgttattc tcccgaacgt gtggcaaaag gcgaaatgct gtctgtacag gatatttgcg
    15241 atattctgca tattcctttg ctgggtgtga ttcctgaatc ccaaaacgtc ttgcaggcat
    15301 ccaattccgg agaaccggtc atccatcagg acagcgtggc ggcttccgag gcatataagg
    15361 acgttattgc ccgtcttttg ggcgagaacc gtgaaatgcg tttcttggaa gctgagaaaa
    15421 aaagcttctt caaacgtctg tttggaggat aaggtatgtc attaatcgaa tttttattcg
    15481 gcagaaagca gaaaacggca accgttgccc gcgaccgcct tcaaatcatc attgcccaag
    15541 agcgcgccca agaaggtcag gctccggatt acctgccgac tttacgtaaa gagttgatgg
    15601 aagtcctgtc caaatatgtg aatgtttcat tagacaatat ccgtatttcc caggaaaaac
    15661 aggatggtat ggatgtgctt gagttgaaca ttactttgcc ggaacagaaa aaggtatagg
    15721 acatgacctt aaccgaattg cggtacatcg tcgcagtcgc ccaagaacgt catttcggca
    15781 gggcggcgcg gcgttgtttt gtcagccagc ccactttgtc tattgccatt aagaaattgg
    15841 aagaagagct tgccgtctct ttgtttgacc ggagcagcaa cgatattatt acgaccgagg
    15901 cgggggaacg tatcgttgca caggcgcgta aggtgttgga agaggcagag cttatcaggc
    15961 atttggcaaa tgaagaacaa aacgagctgg agggtgcgtt caaactcggg ctgattttta
    16021 cggttgcgcc gtacctgctg ccgaaactga ttgtctcgtt gcgccgtact gcaccgaaaa
    16081 tgcctttgat gttggaagag aattacacgc atactttgac cgagtcgctc aaacgcgggg
    16141 acgttgatgc gattatcgtt gccgaaccgt ttcaagagcc gggcattgtt accgaaccct
    16201 tgtatgacga accgtttttc gtgattgtcc cgaaagggca ttcatttgag gaactggatg
    16261 ccgtttcgcc ccggatgctg ggtgaggagc aggttttgct gctgacggaa ggcaactgta
    16321 tgcgggatca ggtactctca agctgttccg aattggcggc gaaacaacgt atacaggggt
    16381 tgaccaatac attgcagggc agctcgatta atacaatccg ccatatggtt gccagcggtt
    16441 tggcaatcag cgtgttgccg gcaaccgcac tgaccgaaaa cgatcatatg ctgttcagca
    16501 ttattccgtt tgagggtacg ccgccaagcc ggcgggtcgt attggcgtac cgccgcaatt
    16561 ttgtccgtcc gaaggcgttg tcggcgatga aggcggcgat tatgcagtcg cagcttcacg
    16621 gggtaagttt tatccgcgac taggcgcagg cattgttttc aaaacgccat ttccctgagc
    16681 cgacaacacg gtatgccaag atattgccgt catcatcgat tttgagtata gcatcgccac
    16741 ggaaactgcc gtcctgaaga tattcgactt ttgcatcact gtgaatgttt tcatcagtgc
    16801 cgatgcaatg ccatgtatag tggattaaca aaaaccagta cggcgttgcc tcaccttgcc
    16861 gtactatttg tactgtctgc ggcttcgtcg ccttgtcctg atttttgtta atccactata
    16921 aaagaggccg agacctttgc aaaactcccc aaaatcccct aaattcccac caagacattt
    16981 aggggatgtt ccatgagcac cttcttcc
//
LOCUS       DAWGKF010000027        17004 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.027, whole genome shotgun sequence.
ACCESSION   DAWGKF010000027 DAWGKF010000000
VERSION     DAWGKF010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17004)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17004)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17004
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.027"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(65..1312)
                     /gene="fabF"
                     /locus_tag="WHR07_000643"
     CDS             complement(65..1312)
                     /gene="fabF"
                     /locus_tag="WHR07_000643"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEZ2129891.1"
                     /translation="MSQRRVVITGLGQVSPVGNTVAEAWDTLLTGKSGIGAITRFDAS
                     DINSRVAGEVRGFDIGQYISAKEARRMDVFIHYGIAAALQAIADSGLDDVENLDKDRI
                     GVNIGSGIGGLPGIEVTGKAVIEGGARKINPFFIPGSLINLISGHVTILKGYRGPSYG
                     MVSACTTGAHAIGDSLRMIKYGDADIMVAGGAEGAISTLGVGGFAAMKALSTRNDDPA
                     TASRPWDKGRDGFVIGEGAGILVLEELEHAKKRGAKIYAEIVGFGMSSDAYHITAPNE
                     EGPALAVTRALKDAGINPEDVDYVNAHGTSTPLGDANETKALKRAFGEHAYKTVVSST
                     KSMTGHLLGAAGGVEAVYSILAIHDGKIPPTINIFEQDVEAGCDLDYCANEARDAEID
                     VAISNSFGFGGTNGTLVFKRFKG"
     gene            complement(1468..1704)
                     /gene="acpP"
                     /locus_tag="WHR07_000644"
     CDS             complement(1468..1704)
                     /gene="acpP"
                     /locus_tag="WHR07_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEZ2129892.1"
                     /translation="MSNIEQQVKKIVAEQLGVNEADVKNESSFQDDLGADSLDTVELV
                     MALEEAFGCEIPDEDAEKITTVQLAIDYINAHNG"
     gene            1936..2943
                     /locus_tag="WHR07_000645"
     CDS             1936..2943
                     /locus_tag="WHR07_000645"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HEZ2129893.1"
                     /translation="MYPLARRILFALDAEKAHHFTLDALYTVYKLGLIPVTGNRTKPV
                     KLMGMDLPNPVGLAAGLDKNGEYIDALGALGFGFIEIGTVTPKPQPGNPQPRLFRVPE
                     HQGIINRMGFNNHGIDTMIRNIEKSKFSGVLGINIGKNAVTPIENAADDYLICLEKAY
                     AHASYITVNISSPNTKNLRALQGGDELSALLEALKNKQAQLASVYGKYVPLAVKIAPD
                     LDEAQIEDIAHVVKSVEMDGIIATNTTIDKSSLGSHPLAGEQGGLSGRPVHEKSNRVL
                     KLLADHIDGKLPIIGVGGIMEGRDAADKIRLGATAVQVYSGLIYKGPALVKECLKALA
                     R"
     gene            3276..3599
                     /locus_tag="WHR07_000646"
     CDS             3276..3599
                     /locus_tag="WHR07_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129894.1"
                     /translation="MFKDELNEFIRLISDPESELDEWYLSDFKDEHIWEMQSYEAFSC
                     LREAVPYLFAYPRYGYELLEIISALKETSDTTELFYEPGIVPLLIDLYKEDSYLVNMV
                     KRIFK"
     gene            3686..3967
                     /locus_tag="WHR07_000647"
     CDS             3686..3967
                     /locus_tag="WHR07_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129895.1"
                     /translation="MENGQRNNRFPLEKRIFYLEHSGRYLMICALSDYSQNKHTVVMA
                     NFIYPDEKTDWRNLDDLFNELVLEELQASFMDWHPTVEEAISRHLEDFS"
     gene            4020..4493
                     /locus_tag="WHR07_000648"
     CDS             4020..4493
                     /locus_tag="WHR07_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2247 family protein"
                     /protein_id="HEZ2129896.1"
                     /translation="MNLDLTAQKVRLSWKDILWGYGNKYLGWADVAAYARKMTLSDHD
                     ERVFKLSLINKSNILELKPVLEDLASEMRDYSPKNWLYVLLSDVFHRKEEFEDPLGEV
                     EKIYADFDYLEEIESFVRYMPPKDGYIPSAHTYEENIARLYSHWEHYLNNGGGQG"
     gene            4747..5082
                     /locus_tag="WHR07_000649"
     CDS             4747..5082
                     /locus_tag="WHR07_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129897.1"
                     /translation="MTVDKEQVEKMIYSENKQSVIDGMLGMTFSSEEDEIPWISEKLT
                     ELSKHKDLDIARLSLTCFGHLARMHENIGDCDKVIALLLSKQGDPDFQGFAEDALDEI
                     SLFIFKKRP"
     gene            5262..7952
                     /gene="glnE"
                     /locus_tag="WHR07_000650"
     CDS             5262..7952
                     /gene="glnE"
                     /locus_tag="WHR07_000650"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HEZ2129898.1"
                     /translation="MSDNRLDTARRHSLFLARQLDNGKLKPEIFLPMLDKVLTEADFQ
                     AFADWDKIRAEENEEELARQLRGLRRYVVSQIIVRDINRISDLNEVTRTITLFADFAV
                     NTALDFAYAYYRDMYGTPIGRYTKSPQHLSVVAMGKAGGYELNVSSDIDLIFVYPESG
                     DTDGRRERGNQEFFTKVGQKLIALLNDITADGQVFRVDMRLRPDGDSGALVLSETALE
                     QYLITQGREWERYAWCKGRVVTPYPNDIKALVRPFVFRKYLDYGAYEAMRKLHRQIRS
                     EVSKKGMADNIKLGAGGIREVEFIAQIFQMIRGGQMRALQLKGTQETLKKLAETGIMP
                     SENVETLLAAYRFLRDVEHRLQYWDDQQTQTLPTSPEQRQLLAESMGFDSYSAFSDGL
                     NVHRNKVNQLFNEILSEPEEQTQDNSEWQWAWQDKPDEEGRRCRLKAHGFDAETVAAR
                     LDQIRHGHKYRHLSAHAQPRFDAVVPLFVQAAAAQSNPTDTLMRLLDFLENISRRSAY
                     LAFLNEHPQTLAQLAQIMGQSSWVAAYLNKYPILLDELISAQLLDTAFDWQALAAALS
                     DDLKACGGDTEAQMDTLRRFQHAQVFRLAVQDLAGLWTVESLSDQLSALADTILAAAL
                     LCAWADMPKKHRDTPQFAVVGYGKLGGKELGYASDLDLVYLYDDPHPDAGDVYSRLAR
                     RLTNWLSAATGAGSLYETDLRLRPNGDAGFLAHSIAAFEKYQRENAWTWEHQSLTRAR
                     FICGTSEIQTAFDRIRTEILTAERDQTALAGEIIEMREKMFPTHPPADSNVKYARGGV
                     VDVEFIVQYLILAHARQYPQLLDNYGNIALLNISADCGLIDKTLAGQSRTAYRFYRRQ
                     QHNTKLRDAAKTEVTGELLAHYGNVRKLWREVFGEEAATA"
     gene            complement(8252..8944)
                     /locus_tag="WHR07_000651"
     CDS             complement(8252..8944)
                     /locus_tag="WHR07_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEZ2129899.1"
                     /translation="MKRFTYTLSDGLCIEIELKRSAKKNLILRPVNMQTVSINVPPFF
                     QDHALANWLAANETILRNTLAKTPVHPVSHPNLPEWIWYRGIKTKLDTHSQSHIRITS
                     SEILLPRKETAAQIDHLRRLLNERAREYLLPRLEKHAAETGLTPTATDLSNAKTFWGV
                     CRPHTGIRLNWRLIGTPEYVADYVCIHELCHLRHPDHSPRFWHLVNTLTPHTDNAKSW
                     LKAHGRELFVLG"
     gene            complement(9052..10245)
                     /locus_tag="WHR07_000652"
     CDS             complement(9052..10245)
                     /locus_tag="WHR07_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HEZ2129900.1"
                     /translation="MSDQKNRRNALIGAAFLMATSAIGPGFLTQTATFTQALAASFGF
                     VILLSILLDIGAQLNIWRIVAVSEKQAQDIANQVLPGAGYFLAVLIVMGGLAFNIGNV
                     GGAGLGLNLLTGLSPETGAVISGVIAIGVFLFKEAGKVMDKFAQVMGFVMIALTVYVA
                     WQANPPLADAAVHTFMPEKLDAMAIVTLVGGTVGGYITFAGAHRLLDAGIKGKSALPE
                     VSQSSVRAILIASIMRIVLFLAVLGVVSQGVQLNPDNPASTPFEYAAGYIGLLIFGVV
                     IWAASITSVIGAAYTSVSFFSGLSPSIERNKNKWIIAFIAVSTAVFSTIGKPAQVLVF
                     VGALNGLILPISLGLILIAAYKTKIVGDYKHPLWLTVSGVIVVGLMAVLSAITISKYI
                     GGLFG"
     gene            complement(10374..11111)
                     /gene="pxpA"
                     /locus_tag="WHR07_000653"
     CDS             complement(10374..11111)
                     /gene="pxpA"
                     /locus_tag="WHR07_000653"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HEZ2129901.1"
                     /translation="MKQVDLNADLAEGCGSDEALLQLITSANIACAQHAGSIADIRAA
                     LAYAQQNGVRIGAHPGYPDRENFGRTEMNLSEADLRACLNYQLGALQALCRDQGLEMA
                     YVKPHGAMYNQAAKNRALADTVARIVADFDPKLKLMALSGSLLLEAGKAAGLGVISEV
                     FADRRYMPDGTLVPRSRPDAQVDSDEEAIAQVLQMVRDGQVKAVDGSLVAVQADSICL
                     HGDGPHAVVFAEKIRQELLAAGIKVSA"
     gene            complement(11098..12027)
                     /locus_tag="WHR07_000654"
     CDS             complement(11098..12027)
                     /locus_tag="WHR07_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HEZ2129902.1"
                     /translation="MIHVSAVQAPAHIQDTGRYGHRRYGIGHAGAMDTVALAAGNILL
                     GNDEGTAAIEIALGGIMLVFERDTPFCLTGAVYQAELDGEPVYSYWRYTARKGQTLKM
                     VRAVQGMYGYVCVAGGFDVPEVMGSRSTDLKAGFGGHQGRMLQKGDYLPIGKGAQELS
                     KVGIAPIPFTDTVHLVPSSEYAAFSEKGRLNLERETWTLQSDSNRMGYRFDGQPLTLS
                     QPLEMLSHAVQAGTVQVPPGGKPIILLADAQTTGGYPKIATVAAADLGRLAQVRFGSK
                     VKFKIIGLKEATALRRKNQAYLNQIRRITHEAG"
     gene            complement(12024..12671)
                     /gene="pxpB"
                     /locus_tag="WHR07_000655"
     CDS             complement(12024..12671)
                     /gene="pxpB"
                     /locus_tag="WHR07_000655"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HEZ2129903.1"
                     /translation="MRIEITPISESALVCRLNAPSELGKQQKLWAFAAALGQHDRIEE
                     VVVGMNNLTVFTRFDTDLATLADELQYVWEHTAVTDHQGKLVEIPVCYGGEYGPDLAE
                     VAAFHQTVISEIVRRHTAQTYTVFMMGFQPGFPYLGGLPEALHTPRRAVPRTSVPAGS
                     VGIGGSQTGVYPFASPGGWQIIGRTELPLFRADLNPPTLLAAGDQVRFVAERIEP"
     gene            12855..15062
                     /gene="uvrD"
                     /locus_tag="WHR07_000656"
     CDS             12855..15062
                     /gene="uvrD"
                     /locus_tag="WHR07_000656"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HEZ2129904.1"
                     /translation="MFPDQSAPNLLQGLNPEQLSAVTWPPQSALVLAGAGSGKTRVLT
                     TRIAWLLQTGQASVHSIMAVTFTNKAAKEMQTRLGAMIPVDVRAMWLGTFHGLCHRFL
                     RLHHRDAGLPSSFQILDGGDQLSLIKRLLKSLNIAEEIIAPRSLQGFINAQKESGLRA
                     SVLSAPDPHTSRMIECYAEYDKICQREGVVDFAELMLRSYEMLQSNEILRQHYQNRFN
                     HILVDEFQDTNKLQYAWLKLMAGGNAAVFAVGDDDQSIYRFRGANVGNMTALMEEFHI
                     DAPVKLEQNYRSVGNILAAANAVIENNDERLGKNLRTDAEAGDKIRYYSAFTDLEEAR
                     FILDETKALEREGWDLDEIAVLYRSNAQSRVIEQSLFRSGIPYKIYGGLRFYERQEIK
                     HALAYLRLAVNPDDDNALLRVINFPPRGIGARTVENLQTASNEQGITLWQAACNAGAK
                     AAKIAAFVRLIEALRNQVGQLPLSEIIVGILKDSGLTEHYRTQKGDNQDRLDNLDELV
                     NAAIEFKPEDSNFEILPENISDDPAFPILAFLSNAALESGENQAGAGEKAVQLMTVHA
                     AKGLEFNAVFLTGMEEGRFPSEMSLAERGGLEEERRLMYVAITRARKRLYITMAQQRM
                     LHGQTQFGIVSRFVEEIPPEVLHYLSIKKTAYDSYGNTRQTATFKDKIIDDYKQPQTY
                     AGFRIGQNVRHAKFGTGVIIDAADKGESARLTINFGKQGVKELDTKFAKLEEM"
     gene            15297..15755
                     /locus_tag="WHR07_000657"
     CDS             15297..15755
                     /locus_tag="WHR07_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HEZ2129905.1"
                     /translation="MSQVFKDFDLSSVWESDSWADENYKEAPFTPEILAAVESELGYK
                     LPQSFIELMAVQNGGIFVKNCFPTTQRNSWAKDHVQICEVSGIGFEKEGSLCGAMGQK
                     LWLEEWEYPPIGVYFANDPSGGHAMFALDYRECGRDGEPKVVFVEQESDF"
     gene            complement(16026..16241)
                     /locus_tag="WHR07_000658"
     CDS             complement(16026..16241)
                     /locus_tag="WHR07_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129906.1"
                     /translation="MNIINYTGDDIIISLTREELQLLRSLVIEIYAGVCIDAEEFEIV
                     SGIRNPQSVQELEQHLIEAYDLMDTTG"
     gene            complement(16364..16722)
                     /locus_tag="WHR07_000659"
                     /pseudo
     CDS             complement(16364..16722)
                     /locus_tag="WHR07_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215099.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
     gene            16775..>17004
                     /locus_tag="WHR07_000660"
     CDS             16775..>17004
                     /locus_tag="WHR07_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ2129907.1"
                     /translation="MRKSRLSRYKQNKLIELFVAGVTARTATEPDSIVYTDCYRSYDV
                     LDVSEFSHFRINHSTHFAERQNHINGIENFWNR"
BASE COUNT         4241 a         4531 c         4345 g         3887 t
ORIGIN      
        1 ctataaaaat gccgtctgaa acggtttcag acggcatttc gatgtcggcg gcggctttgc
       61 ggaatcagcc tttgaagcgt ttgaagacca gcgtgccgtt ggtgccgccg aagccgaagg
      121 agttggaaat ggcaacgtcg atttccgcgt cgcgcgcttc gttggcgcag tagtccaaat
      181 cgcagccggc ttcaacgtct tgttcaaaaa tgttgatggt cggcgggatt ttgccgtcgt
      241 gtatcgccaa aatgctgtac acggcctcca cgccgcccgc cgcgccgagc aggtggccgg
      301 tcatggattt ggtcgagctg acgacggttt tgtaggcgtg ttcgccgaac gcgcgtttga
      361 gggctttggt ttcgttggca tcgcccaagg gggtggacgt gccgtgcgcg ttgacgtaat
      421 ccacgtcttc gggattgatg ccggcatctt tcagcgcgcg ggtaacggca agggcggggc
      481 cttcttcgtt cggcgcggtg atatggtaag catcggaact catgccgaag ccgacgattt
      541 cggcgtagat tttcgcgccg cgttttttgg cgtgttccaa ttcttccaac accaatatgc
      601 ccgcgccttc gccgataacg aagccgtcgc ggcctttgtc ccacggacgg gaagcggtgg
      661 cggggtcgtc gttgcgggtg gagagggctt tcatcgcggc aaaaccgccc acgcccaaag
      721 tgctgattgc gccttccgcg ccgccggcaa ccattatgtc cgcgtcgccg tatttaatca
      781 tacggaggga atcgccgatg gcgtgcgcgc cggtggtgca ggcggaaacc atcccgtagc
      841 tcgggccgcg gtagcctttg aggatggtaa cgtgtccgga aatcagatta atcagagaac
      901 cggggataaa gaaagggttg attttgcgcg cgccgccttc gattacggct ttgccggtga
      961 cctcgatgcc gggcagtccg ccgatgccgg aaccgatgtt cacgccgatg cggtctttgt
     1021 cgaggttttc cacatcgtcc aaacccgaat cggcgattgc ctgcaatgcg gcggcaatgc
     1081 cgtagtggat gaatacgtcc atccggcgcg cttctttcgc gctgatgtat tgtccgatgt
     1141 cgaaaccgcg cacctcgccg gcgacacggc tgttgatgtc ggatgcgtca aagcgggtaa
     1201 tcgcgccgat gccgcttttg ccggtgagca gggtgtccca agcctctgcg acagtgttgc
     1261 cgacagggga aacctgacct aagcctgtaa tgactactct tctctgactc atgataacct
     1321 cgctgttggt tgtcggaatg ggggcatatg cggctgtcgt gcagatgccg tctgtaattt
     1381 gcggcagggg ttcaaacagt ttgccatata agggaaaagc ctctattgcg cggtgcagca
     1441 gaggctgttg tgtcgggcga cgaccggtta gccgttgtgg gcattgatgt agtcgatagc
     1501 cagttggacg gtggtgattt tttcggcatc ttcgtcgggg atttcgcagc cgaatgcttc
     1561 ttccaaagcc ataaccagct ccacggtgtc caaagaatcc gcgcccaagt cgtcttggaa
     1621 agaagattcg tttttcacgt cggcttcgtt tacgcccagt tgttcagcaa caattttttt
     1681 aacttgttgt tcgatgtttg acatatcagt cgttccttta tgccttgcgg caggttgttt
     1741 aagggaaata aatcggtggt attgtaccga cttttaatag agttttctat ctaatgacta
     1801 ttatatcaat atttgccgat ttgtacattt ttgggtgcgg cgggttttgt cgttcaagtt
     1861 tgacctgtgt gccgtatgtt tgacgggatt tcggttaaaa tgacggcatt tccatctgaa
     1921 gcagaaagcc ctgtcatgta tccacttgcc cgccgcatcc tgtttgcact cgatgccgag
     1981 aaagcccacc acttcacgct cgacgcgctc tacacggttt ataaattggg tctgattccc
     2041 gtaaccggca accgtaccaa acctgtaaaa ttgatgggta tggatttgcc caaccctgtc
     2101 ggacttgccg ctggactcga caaaaacggc gaatacatcg acgcattggg cgcgctcggc
     2161 tttggtttca tcgaaatcgg cacggtaacg cccaaaccgc agcccggcaa cccgcagccg
     2221 cgcctcttcc gcgttcccga acaccaaggc atcatcaacc gcatgggttt caacaaccac
     2281 ggtatcgaca ccatgatacg caacatcgaa aaaagtaaat tcagtggcgt attgggcatc
     2341 aacatcggta aaaacgcggt tacacccatc gaaaacgctg ccgatgatta tttaatctgc
     2401 cttgaaaaag cctacgcaca cgcaagttac attaccgtca acatttcctc gcccaacacc
     2461 aaaaacctcc gcgcgctgca aggtggcgac gagttgagcg cattgcttga ggctttgaaa
     2521 aacaaacagg cacagcttgc ctctgtatac gggaaatacg ttccgctcgc cgtcaaaatc
     2581 gcccccgatt tggatgaagc acaaatcgaa gacatcgccc acgttgtcaa atccgtcgaa
     2641 atggacggca tcatcgctac caataccacc atcgacaaat caagtctcgg cagccatccg
     2701 ctcgcaggcg agcagggcgg tttgagcggg cggcccgttc atgaaaaaag taatcgggtg
     2761 ttgaagctgt tggcagacca tatagacggc aagctgccga ttatcggcgt aggcggcatt
     2821 atggaaggca gggacgcggc agataaaatc cgcttgggcg caactgccgt ccaggtgtac
     2881 agcggattga tatacaaagg tccggcattg gtcaaagaat gtttgaaggc tttggcgcga
     2941 tgacgcgatc cgcccaaaat gccgtctgaa cgcacgtttt gccgttcaga cggcattttc
     3001 atttcctttt tccgcctgcc gccccttgaa aatcccttac gcgccgccct gtttgaaaca
     3061 aagcaaacgc ccgccgcgaa ccggacaatc ttgatacgca gccaaagcaa gtccggcggt
     3121 aagttgttaa atatataagc aattgataca aaaaataatt ttatgccgtg gtggacggtt
     3181 tgagaaaacg caaaatatga acggcgttga aattcatgat gtggaaaata aggatacggc
     3241 ggataatcaa aagattttat atttaaggat ttgatatgtt taaggacgaa ctaaatgaat
     3301 ttatccgatt gatatccgat ccggaaagtg aattggatga atggtatttg agtgatttta
     3361 aagatgaaca tatatgggaa atgcaaagtt acgaagcatt ttcatgtttg cgggaagcag
     3421 tcccctattt gtttgcttat ccccgatacg ggtatgaact gttggagata atttccgcgt
     3481 taaaagaaac atctgatacg acagaattat tttatgagcc gggtatcgtg cctttgctga
     3541 ttgatttata taaagaagat agttatctgg taaatatggt caaacggata ttcaaatgat
     3601 gaaaggggcg cgggcgtttg cttggcggaa ggcaggtaac tcaatttgaa ggacgcggaa
     3661 gccgatacgt taaaaaggat gaaaaatgga aaacgggcaa cggaataacc ggtttccttt
     3721 ggaaaaacga attttttatc tggagcattc ggggcggtat ctgatgattt gcgccttatc
     3781 ggattattcc caaaacaaac atactgtcgt tatggcaaat ttcatctatc cggatgaaaa
     3841 aacggattgg cggaatttgg atgatttatt caatgagttg gttttagagg aattgcaggc
     3901 ttcatttatg gattggcatc cgactgttga agaggcaatc agccgtcatt tggaagactt
     3961 ttcgtaacag gcgtcaatcg gaaggggcgg aatgacgggg caggcaatcg gagtaaaaaa
     4021 tgaaccttga tttaaccgcg caaaaagtcc gtctttcttg gaaggatatt ctgtgggggt
     4081 atgggaataa atacttgggt tgggctgatg tggcagctta tgcccgaaaa atgacgcttt
     4141 cagatcatga tgaacgtgtg ttcaaactat ctttaatcaa caaatccaat attcttgaat
     4201 taaagcctgt tctggaagat ttggcttcgg aaatgaggga ttattcccct aaaaattggc
     4261 tgtacgtcct cttaagcgat gtattccata gaaaagaaga atttgaggat cctttggggg
     4321 aagttgaaaa aatttatgca gattttgatt atctggaaga aatagaatca tttgtcaggt
     4381 atatgccgcc caaagacggt tatattcctt ctgcccacac ctatgaagaa aatattgccc
     4441 ggttatattc tcactgggaa cactatttga acaacggcgg agggcagggt taaaaccggc
     4501 aatccgatgc cgtctgaagc attatccggc cttcagacgg caaacggatt agagcggaag
     4561 atttgaaagc gggggcgggc tgcattccgg aagcggcaaa acccgaaccg cccgcatcgt
     4621 tgccgataaa ccgataagga aatcgttttg ccggaccggg tgcaaatgtt tgataacaat
     4681 cctgccgccc ggcaaaaatg ctttaaagaa agcaggattg gttaatttaa aaggaaaaat
     4741 taaaaaatga cggttgataa ggaacaagta gaaaagatga tttattctga aaataaacag
     4801 agtgttattg acggtatgct cggtatgacc ttcagctcgg aggaggatga aatcccctgg
     4861 atttccgaga agttgacgga gttgtcgaaa cataaagact tggatattgc cagattgtca
     4921 ttaacctgtt tcggacatct cgccaggatg catgaaaata tcggcgattg cgataaagtg
     4981 attgctttat tgctctcaaa acaaggtgat ccggattttc aaggttttgc cgaagatgcg
     5041 ttagacgaga tttctttatt tatatttaaa aagcgtccgt aagcgcggat taaacctgtc
     5101 aatccgatgc cgtctgaagc gttatccggc tttcagacgg catcgaaggt tgctatgata
     5161 tagtggcttg actttaaacc ggtacggcat cccctcgccc tgtcctgatt tgaagtgaat
     5221 ccgccatcat cttcctgcca ttttttcaaa cggaatccga aatgtccgac aaccgcctcg
     5281 acaccgcccg ccgccattcc ctcttcctcg cccgccagct cgacaacggc aaactcaagc
     5341 ccgaaatttt cctgcctatg ctggacaagg ttttgaccga agcggatttc caagcctttg
     5401 ccgactggga caaaatccgt gcggaagaaa acgaggaaga attggcgcgg cagttgcgcg
     5461 ggttgcgccg ttatgtggtg tcgcagatta tcgtgcgcga tataaaccgc atcagcgatt
     5521 tgaacgaagt aacccgcacg attacgctgt ttgccgattt tgccgtcaat accgcgctgg
     5581 attttgccta cgcctattat cgggacatgt acggcacgcc gatcgggcgt tataccaaat
     5641 cgccgcagca tttgagcgtg gtggcgatgg gcaaggcggg cggctatgag ttgaacgtgt
     5701 cttccgacat cgatttgatt ttcgtctatc ccgaatcggg cgacaccgac ggcaggcgcg
     5761 aacgcggcaa tcaggagttt ttcaccaaag tcgggcagaa actgattgcg ttgctgaacg
     5821 acattaccgc cgacgggcaa gtgttccgcg tcgatatgcg gctgcggccg gacggtgatt
     5881 cgggcgcgtt ggtattgagc gaaaccgcgc tggagcaata tttgattaca caggggcgag
     5941 aatgggaacg ctacgcgtgg tgcaaaggtc gcgtggttac gccgtatccg aacgacatca
     6001 aagcactggt gcgccccttt gtgttccgca aatatctgga ttacggcgcg tatgaggcga
     6061 tgcgtaagct gcaccgccaa atccgcagcg aagtcagcaa aaaaggcatg gcggacaaca
     6121 tcaaactcgg cgcgggcggc atccgcgaag tcgaatttat cgcccagatt ttccagatga
     6181 tacgcggcgg ccaaatgcgt gcgctgcaac tgaaaggcac gcaggaaacg ctgaagaaac
     6241 ttgccgaaac cgggatcatg ccgtctgaaa acgtcgaaac cctgcttgcc gcctaccgct
     6301 tcctgcgcga cgtcgaacac cgcctgcaat actgggacga ccaacaaacc caaaccctgc
     6361 ccacttcgcc tgaacagcgg caactgctcg ctgaaagcat gggtttcgac agttattccg
     6421 ctttttcaga cggtctcaat gttcatcgga acaaagtcaa tcagttgttc aacgaaattt
     6481 tgagcgaacc cgaagagcaa acgcaagaca acagcgaatg gcaatgggca tggcaggaca
     6541 aacccgacga agaagggcgg cgatgccgtc tgaaggcgca cgggttcgat gccgaaaccg
     6601 tcgccgcaag gctcgaccaa atccgccacg gccataaata ccgccatctt tccgcacacg
     6661 cccagccgcg tttcgatgcg gttgtgccgc tgttcgtaca ggcggcggca gcgcaaagca
     6721 acccgaccga tacattgatg cggctgttgg attttctcga aaacatcagc cgccgatccg
     6781 cctatctcgc cttcctcaac gaacatccgc aaaccttggc gcaactggcg cagattatgg
     6841 gccaaagttc ttgggtggcg gcgtatctga acaaatatcc gattttgttg gacgaactca
     6901 tcagcgcgca gcttttggat accgcgtttg attggcaggc gctcgccgcc gccctttcag
     6961 acgacctcaa agcctgcggc ggcgatactg aagcgcaaat ggacaccctg cgccgcttcc
     7021 agcacgccca agtcttccgt ctcgccgtcc aagacctcgc cggactgtgg acggtagaat
     7081 ccctctccga ccaactctcc gccctcgccg acaccatcct cgccgccgcc ctgctgtgcg
     7141 catgggcgga catgcccaaa aaacaccgcg acacaccgca attcgccgtc gtcggctacg
     7201 gcaaactcgg cggtaaagaa ctcggctacg cctccgacct cgacctcgtc tacctctacg
     7261 acgatcccca ccccgacgca ggcgacgtgt acagccgcct cgcccgtcgc ctgaccaact
     7321 ggctttccgc cgccactggc gcaggcagcc tctacgaaac cgacctgcgc ctgcgcccta
     7381 atggcgacgc cggtttcctc gcccacagca tcgccgcctt tgaaaaatac cagcgcgaaa
     7441 acgcctggac gtgggaacac caatccctta cccgcgcccg cttcatctgc ggcacgtccg
     7501 aaattcagac ggccttcgac cgcatccgca ccgaaatcct caccgccgaa cgcgaccaaa
     7561 ccgccttggc aggcgaaatc atcgaaatgc gcgaaaaaat gttccccacc cacccgcctg
     7621 ccgacagcaa cgtcaaatac gcgcgcggtg gcgtggtcga tgtcgaattt atcgtccaat
     7681 atctgatact tgcccatgcc cgccagtatc cgcaactctt ggacaactac ggcaacatcg
     7741 ccctcttaaa catctccgcc gactgcggtt tgattgacaa aaccctcgcc ggacaaagcc
     7801 gcaccgccta tcgcttctac cgccggcagc agcacaacac caaactgcgc gacgcggcaa
     7861 aaaccgaagt aaccggcgaa ctgttggcac attacggcaa tgtcaggaaa ttgtggcggg
     7921 aagtgttcgg cgaagaagcg gcaaccgcct gaacaaaaaa tgccgtctga agcctgacaa
     7981 tctgggtttc agacggtatt ttcgtaccgt gccgttttaa ggttgcggca gagctaaagc
     8041 gatttatcgg gaatggctga aacccaaaaa ccggattcct ctttcagtta cagcagcttg
     8101 atccctttcc cttatccaac gggggaaggc taggataggg tggcttgcaa atatacagaa
     8161 caagggacaa gagccaccct ctctccaacc ctctccctcc gtacgggagg gggtggattc
     8221 tcgcgggcga agcccacgct acggttagcc tttaccccag cacaaacaat tcccgcccgt
     8281 gcgccttcag ccaactttta gcattgtcgg tatgcggcgt cagcgtgttc accaaatgcc
     8341 aaaagcgcgg actgtggtcg gggtggcgga ggtggcagag ttcgtggatg cagacatagt
     8401 cggcgacgta ttcgggcgtg ccgatcagcc gccagttgag gcggatgccg gtgtgcgggc
     8461 ggcatacgcc ccaaaaggtt ttggcgttgc tcaggtctgt ggcggtgggc gtcagtcctg
     8521 tttcggctgc gtgtttttca aggcggggca gcaggtattc gcgggcgcgt tcgttcaaca
     8581 ggcggcgcag gtggtcgatt tgtgcggcgg tttcttttcg gggaagcagg atttcagacg
     8641 acgtgatacg gatatggctt tggctgtggg tatccagctt ggtctttatt ccccgatacc
     8701 aaatccactc gggtaagttt gggtgggaaa caggatgcac gggcgttttg gcaagcgtgt
     8761 tccgcaaaat cgtttcgttt gccgccagcc agtttgctaa cgcgtggtct tgaaaaaagg
     8821 gtgggacgtt gatgctgacc gtctgcatat tgacggggcg cagaatcaga tttttcttgg
     8881 cactgcgttt gagttcgatt tcgatgcaca aaccgtcgga aagagtatag gtgaagcgtt
     8941 tcatagttgt gaataggttt cagaccggat acatcgtctg aaacaggaat tttccatatc
     9001 aggcggcaaa cttcggataa tatacaaaat caaacatctg cgctacaagg ttcagccgaa
     9061 caagccgccg atatatttgc tgatggtgat ggcgctgagt actgccatca aaccgaccac
     9121 aatcacgccg gaaacggtga gccacagcgg gtgtttgtag tcgccgacaa ttttggtttt
     9181 gtaggcggca atcagaatca gaccgaggga aatcggtaaa atcaggccgt ttaatgcgcc
     9241 tacgaacacc agcacctgcg ccggtttgcc gatggtggaa aatacggcgg tggacacggc
     9301 gataaaggca ataatccatt tgtttttatt gcgttcgata gacgggctga gaccggagaa
     9361 gaacgacacc gaagtataag ccgcaccaat caccgaagta atcgaagccg cccaaatcac
     9421 cacgccgaaa atcagcaggc cgatgtatcc cgccgcatat tcaaacggtg tggaagcagg
     9481 gttgtcggga ttgagctgta cgccttggct gaccacgccc aaaaccgcca aaaacaatac
     9541 aatccgcata atcgaggcaa tcaggatcgc ccgcaccgag ctttggctca cttccggcaa
     9601 cgccgatttg cctttgatac ctgcgtccag cagacggtgc gcaccggcga aggtgatgta
     9661 gccgccgacc gtgccgccca ccagtgtaac aatcgccatt gcatcgagtt tttccggcat
     9721 aaaggtatgc acggcggcat ctgccagcgg cggattcgcc tgccatgcca cataaaccgt
     9781 cagcgcaatc attacgaaac ccatcacttg ggcgaatttg tccatcactt tgcctgcttc
     9841 tttaaacaga aacacaccga tggcaatcac gccgctgatc acggcaccgg tttccggtga
     9901 cagtccggtc agcaggttca gacccaagcc tgcgccgccg acgttgccaa tattgaacgc
     9961 caaaccgccc atcacaatca gcacagccaa gaaatagcct gcgccgggca agacctgatt
    10021 ggcaatatcc tgcgcctgtt tttcggaaac ggcgacaatc cgccaaatat tgagctgcgc
    10081 cccgatgtcg agcagaatcg agagcagaat cacaaagccg aaacttgccg ccagtgcttg
    10141 ggtgaaggtg gcggtttggg tcagaaagcc cgggccgatg gcggaagtcg ccatcaggaa
    10201 tgcagcgccg attaaggcat ttctgcggtt tttttgatca gacataatcg cttatcctct
    10261 ataaaattgg ttgttgctgt gtttgggcga aacctgcggt tttagctacg cagaaactcg
    10321 ctttgctcgt tttggcgaaa cctgcggttt tcagacggcc tatgaactgt ttttcaagca
    10381 gaaactttga tgcctgccgc cagtagttcc tgccggattt tttcggcaaa caccacggcg
    10441 tgcggcccgt ctccgtgcag acagatgctg tcggcttgca cggcaaccag gctgccgtcc
    10501 actgctttga cctgcccgtc ccgcaccatc tgcaatactt gggcgatggc ttcttcgtcg
    10561 ctgtccacct gcgcatcggg gcggctgcgg ggaaccagcg taccgtcggg catatagcgg
    10621 cggtcggcga atacttcgga aatcacaccc aagcctgcgg cttttccggc ttccaagagc
    10681 aggctgccgg aaagtgccat caatttcaat ttcgggtcga aatccgccac aattcgggca
    10741 acggtatccg ccagcgcacg gtttttcgcc gcttgattgt acattgcgcc gtgcggtttg
    10801 acataagcca tttccaaacc ctgatcacgg cacaaggcct gcaatgcgcc caactggtaa
    10861 ttcagacacg cccgcaaatc ggcttcggac agattcattt cggtacggcc gaagttttcc
    10921 cgatcgggat agccggggtg tgctccgatg cgcacgccgt tttgttgggc atacgccaat
    10981 gccgcccgaa tatcggcaat gctgccggcg tgttgggcgc aggcgatgtt ggccgaagta
    11041 atcagctgca acaaggcttc gtcgctgccg cagccttcgg cgagatcggc gtttaaatca
    11101 acctgcttca tgggtgattc tccgtatttg gttcagatag gcttggtttt tgcgccgcag
    11161 ggcggtggct tctttcaagc cgattatttt gaatttgact ttgctgccga agcgcacctg
    11221 tgccagcctg cccaaatcgg cggcggcaac ggtagcgatt ttcggataac cgccggtggt
    11281 ttgcgcatcg gccagcagga taatcggttt gccgccgggc ggcacctgca cggttcctgc
    11341 ctgaacagcg tgggacagca tttccaaagg ttgcgacagg gtcagcggct gtccgtcgaa
    11401 gcggtagccc atgcggttgc tatcgctttg cagcgtccac gtttcccgtt ccagattcag
    11461 acgccctttt tcactgaaag cggcatattc cgacgaagga acaaggtgga cggtatcggt
    11521 aaacggtatc ggggcaatgc cgactttgga caattcctgc gcacctttgc cgatggggag
    11581 ataatcgcct ttttgcagca ttctgccctg atggccgccg aaaccggctt tcaggtcggt
    11641 acttctcgaa cccatcactt ccggcacatc aaatccgccc gccacgcaca catagccgta
    11701 catgccctgc acggcacgca ccattttcaa ggtctgccct ttgcgggcgg tataacgcca
    11761 atacgaatag accggttcgc cgtccaattc cgcctgatac acggcaccgg tgagacaaaa
    11821 cggcgtatcc cgttcaaaca ccagcattat cccgcccaaa gcgatttcga ttgcggccgt
    11881 gccttcgtcg ttgcccaata aaatattacc cgccgccaaa gcaaccgtgt ccatcgcacc
    11941 ggcatgaccg atgccgtaac gccggtgtcc gtagcgtccg gtatcctgaa tatgcgccgg
    12001 tgcctgcact gccgaaacgt gaatcatggc tcaatccttt ctgcaacaaa gcggacttgg
    12061 tcacccgccg ccagcagggt cggcggattc aaatcggctc ggaacaaggg taattcggtt
    12121 ctgccgataa tctgccagcc gccgggcgaa gcgaacggat acacaccggt ctgactgccg
    12181 ccgataccga ccgaaccggc aggaacggac gttctcggca cggcacggcg gggcgtgtgc
    12241 aatgcttcgg gcaagccgcc cagataaggg aaaccaggct ggaagcccat cataaatacg
    12301 gtataagttt gcgccgtatg gcggcggacg atttcggaaa taaccgtctg atggaaagca
    12361 gcgacttccg ccaaatccgg gccgtattcg ccgccgtagc agacgggaat ttccaccagt
    12421 ttgccctgat ggtctgtaac ggcggtgtgt tcccacacat attgcaattc atcggcaagc
    12481 gtcgccaaat cggtatcgaa acgggtgaac acggtcagat tgttcatgcc gaccaccact
    12541 tcctcaatcc tgtcgtgctg cccgagcgca gcggcaaacg cccacaactt ttgctgtttg
    12601 cccagttcgg aaggtgcatt cagtcggcag accaaagcgg attcgctgat tggtgtgatc
    12661 tctattctca tttgttgttc attttggtta tgttttaatg aatctatatg caggggcggc
    12721 ggtttgtcaa tatcttctgt gctgcatcat caaaccgtcg attggaaaag tgctgccctg
    12781 ccgctgcact ttttcagacg accttaaacc gtttctatta aaatagcgca ttccactttt
    12841 cagacggcat ctctatgttt cccgaccaat ccgcccccaa cctgctgcaa ggcttgaacc
    12901 ctgaacaact ttccgccgta acctggccgc cgcaatccgc ccttgtgctg gcaggcgcgg
    12961 gcagcggcaa aacgcgcgtg ctgaccacgc gtatcgcatg gcttttgcaa accggtcagg
    13021 caagcgtgca cagcattatg gcggtaacgt ttaccaacaa agccgccaaa gaaatgcaaa
    13081 cccgactcgg cgcgatgatt cccgtcgacg tccgcgctat gtggctcggc acgttccacg
    13141 gcctctgcca ccgctttcta cggctgcacc accgcgatgc cggtttgccg tcttcctttc
    13201 aaatcctcga cggcggcgac cagctttccc tcatcaaacg cctgctcaaa agcctcaaca
    13261 tcgccgaaga aatcatcgcg ccgcgttcgc tgcaaggctt tatcaacgcg caaaaagaat
    13321 ccggtttgcg cgcttccgtc ttgagtgcgc ccgatccgca cacaagccgc atgattgaat
    13381 gctacgccga atacgacaaa atctgccaac gcgaaggcgt ggtcgatttt gccgaactca
    13441 tgctccgcag ctacgaaatg ctgcaaagca acgaaatcct gcgccagcat taccaaaacc
    13501 gcttcaacca cattctcgtc gacgagttcc aagacaccaa caaactgcaa tacgcctggc
    13561 tcaaactcat ggcgggcgga aacgcagcgg tatttgccgt cggcgacgac gaccaaagca
    13621 tttaccgttt ccgtggcgca aacgtcggca acatgaccgc gctgatggaa gaattccaca
    13681 tcgacgcgcc cgtcaaactc gaacaaaact accgctccgt cggcaacatc cttgccgccg
    13741 ccaatgccgt gattgaaaac aacgacgaac gactcggcaa aaacctgcgc accgacgccg
    13801 aagcaggcga caaaatccgc tactactccg cctttaccga cctcgaagaa gcccggttca
    13861 tcttggacga aaccaaagcc ctcgaacgcg aaggctggga tttggacgaa atcgccgtcc
    13921 tctaccgtag caacgcccaa tcccgcgtta tcgaacaaag cctgttccgc agcggcatcc
    13981 cctacaaaat ctacggcggc ttgcgctttt acgaacgcca agaaatcaaa cacgcgctcg
    14041 cctacctacg cctcgccgtc aatcccgacg acgacaacgc ccttttgcgc gtcatcaact
    14101 tcccaccgcg cggcatcggc gcacgcaccg tcgagaacct tcagacggcc tcaaacgaac
    14161 aaggcatcac cctttggcag gcagcctgca acgccggcgc gaaagccgcc aaaatcgccg
    14221 ccttcgtccg cctgattgaa gcactgcgca accaagtcgg acaactgccc ctgtccgaaa
    14281 tcatcgtcgg catcctcaaa gacagcggcc tgaccgaaca ctaccgcacc caaaaaggcg
    14341 acaaccaaga ccgtctcgac aaccttgacg aactcgtcaa tgccgccatc gagttcaaac
    14401 ccgaagacag caacttcgaa atcctgcctg aaaacatttc agacgaccca gccttcccca
    14461 tcctcgcctt cctaagcaat gccgccctcg aatccggcga aaaccaagca ggcgcgggcg
    14521 aaaaagccgt ccaactcatg accgtccacg ccgccaaagg cttggaattt aacgccgtct
    14581 tcctcaccgg catggaagaa ggccgtttcc ccagcgaaat gagccttgcc gagcgcggcg
    14641 gcctcgaaga agaacgccgc ctcatgtacg tcgccatcac ccgcgcccgc aaacgcctct
    14701 acatcaccat ggcgcaacaa agaatgctgc acgggcaaac ccaattcggc atcgtctccc
    14761 gcttcgtcga agaaatcccg cccgaagtat tgcactacct gtccatcaaa aaaaccgcct
    14821 acgacagcta tggcaacacg cgtcaaactg ccacgttcaa agacaaaatc atcgacgact
    14881 acaaacagcc gcaaacctac gcaggcttcc gcatcggaca aaacgtccgc cacgccaaat
    14941 ttggcaccgg cgtgattatc gatgccgcag ataaaggcga atccgcccga ctgaccatca
    15001 atttcggcaa acagggcgtg aaagagttgg acaccaagtt tgcgaaattg gaagagatgt
    15061 agaagggaga tggcagaggc cgtctgaaaa cgggaacaac aatttttgcc caaacctccg
    15121 ccgtcattcc cgcgcaggcg ggaatccaga cctttcggca cgggaactta tcggataaaa
    15181 ggtttcttta gattccacgt tctagattcc cgcctgcgcg ggaatgacgg acggtaaaag
    15241 ccgggtatag atacctaacc cttgtttata gctgaaaatc aataaggaag aacattatgt
    15301 cccaagtttt taaagatttt gatttgtcct ccgtatggga atccgacagt tgggcagatg
    15361 aaaactacaa agaagccccg tttacccctg aaattttggc tgccgtagaa agtgaactgg
    15421 gctataaatt gccgcaaagt tttattgaat tgatggcggt acaaaacggc ggaatatttg
    15481 tcaaaaactg ttttccgacc acacagagaa attcgtgggc gaaagatcat gtgcaaattt
    15541 gcgaggtatc gggaatcggt tttgaaaaag aagggagttt gtgcggcgcg atggggcaaa
    15601 aactttggct ggaagaatgg gaatacccgc ctatcggcgt gtattttgcc aacgacccgt
    15661 caggcggtca tgccatgttt gccttggact atcgggagtg tggaagagac ggagagccga
    15721 aagtggtgtt tgtcgaacaa gaatcggatt tttaaatcgt cgaacttgcc cccgattttg
    15781 aaacctttat tcacagcttg cggcatgaag atgagtttat tgacgaggaa atataaaacg
    15841 gcggttgaaa aaccagaatc atcaaaggaa aacgggcgga ataacagata accgattgaa
    15901 tccgtaagga aaacggtttg taggaacgtg ccatccaaga cctttgcaaa gaaaaactgt
    15961 ccccgacagc attgacatta ttaacagaac ttatcaattt tggagctatc tcaaatataa
    16021 ttcggttatc ctgttgtatc cattaaatca tatgcttcaa ttaaatgttg ttctagctct
    16081 tgcactgatt gaggattgcg aattcctgat acaatctcaa attcttctgc atctatgcaa
    16141 acacctgcat aaatttcaat aacaagggaa cgcaataatt gaagctcttc tcttgttaaa
    16201 gaaataataa tgtcatcacc tgtgtaattg attatattca taataatttt atttttgctt
    16261 gtcaaagtaa gttttgccta aggttggtct caatgcttcc caccatcttt tgaatttggg
    16321 tctctgatta caaccgttcc agacttatca tcccaaattg ctcttatgtg tttggattgt
    16381 aatcttcgaa ttcccaagaa aaaaatcgta ataagtttga aagtgtcaaa tcccaagttt
    16441 cttttgagca atattctaat attttatcaa tttcactttt aataatctta tgatcaaact
    16501 gttctaatat taatgcatta gaccaaaaaa accttcttta ttacaatgat gggaaatcca
    16561 tttaggagaa caaatgcaaa gtgaaaaaat agatgagcct tgttctcctt cgattccgat
    16621 atccaaatct atccatctat ggaaattatc tggaatttcg ggggtaaatt tttcaaaatc
    16681 aatatcatat aaatttatgc tttttaaatc caatttaatc attagggctg tcctagataa
    16741 atagggaaat tcaaattaag ttagaattat ccctatgaga aaaagtcgtc taagccggta
    16801 taaacaaaat aaactcattg agctatttgt cgcaggtgta actgcaagaa cagcaacaga
    16861 gcctgacagc attgtttata cggattgtta tcgtagctat gatgtattag atgtgagcga
    16921 atttagccat ttccgtatca atcacagcac acattttgct gaacgacaaa accatatcaa
    16981 tggaattgag aatttttgga accg
//
LOCUS       DAWGKF010000028        16912 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.028, whole genome shotgun sequence.
ACCESSION   DAWGKF010000028 DAWGKF010000000
VERSION     DAWGKF010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16912)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16912)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16912
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.028"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(65..904)
                     /locus_tag="WHR07_000661"
     CDS             complement(65..904)
                     /locus_tag="WHR07_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c5 family protein"
                     /protein_id="HEZ2129908.1"
                     /translation="MKQLRDNKAQGSALFTLVSGIVIVIAVLYFLIKLAGSGSFGDVD
                     ATTEAATQTRIQPVGQLTMGDGIPVGERQGEQIFGKICIQCHAADSNVPNAPKLEHNG
                     DWAPRIAQGFDTLFQHALNGFNAMPAKGGAADLTDQELKRAITYMANKSGGSFPNPDE
                     AAPADNAASGTASAPADSAAPAEAKAEDKGAAAPAVGVDGKKVFEATCQVCHGGSIPG
                     IPGIGKKDDWAPRIKKGKETLHKHALEGFNAMPAKGGNAGLSDDEVKAAVDYMANQSG
                     AKF"
     gene            1189..1264
                     /locus_tag="WHR07_000662"
     tRNA            1189..1264
                     /locus_tag="WHR07_000662"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1222..1224,aa:Arg,seq:ccg)
     gene            complement(1329..2522)
                     /locus_tag="WHR07_000663"
     CDS             complement(1329..2522)
                     /locus_tag="WHR07_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HEZ2129909.1"
                     /translation="MYRHIEYYPGDPILSLVETFKNDPRPEKVNLSIGIYFDDEGKMP
                     VLESVSRAETARAATPVPSPYLPMEGLDTYRSAVQHLLFGKDNPALAQGRIATVQTLG
                     GSGALKVGADFLHRWFPEARAYVSDPTWDNHRGIFESAGFEVGTYPYYDPAAVGVKFD
                     EMTAFFNTLPENSVLILHPCCHNPTGVDMSEQQWDEVLHIIKTRKLIPFMDIAYQGFG
                     GDLDSDAYAVRKAVEMELPLFVSNSFSKNLSLYGERVGGLSVVCPNKEEADLVFGQLK
                     FTVRRIYSSPPAHGAYIAADVMNSPELYALWQNEVYMMRDRIRAMRQKLYDVLTAQIP
                     DRDFTYFIKQRGMFGYTGLSVEQVRRLRDEFAVYLLDSGRMCVAGLNTSNTDYVARAF
                     AEVLK"
     gene            complement(2528..3631)
                     /gene="trmA"
                     /locus_tag="WHR07_000664"
     CDS             complement(2528..3631)
                     /gene="trmA"
                     /locus_tag="WHR07_000664"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HEZ2129910.1"
                     /translation="MSDYTQQLQDKKDHLKTLFAGLDVPEWEVYESPDKHYRMRAEFR
                     IWHEGGEMFYAMFEKGQKAGGASLIRCDRFEAASEAVNRLMPELIAVAAQSAELRNRW
                     YAVEFLSTLSGEMLVTMIYHKRLDNEWMQAAQALQQQLDISVIGRSRGQKIVLKQDYV
                     TETLKVGNRDFRYRQIEGSFTQPNAAVCQKMLEWACGAAEGLDGDLLELYCGNGNFTL
                     PLSEKFERVLATEISKTSVSAAQWNIEANRIGNIKIARLSAEEFTEAYTGKREFKRLK
                     DGGIALTDYAFSTIFVDPPRAGIDEETLKLVSQFDNIIYISCNPETLRTNLDTLAETH
                     TVERAALFDQFPFTHHIESGVLLKKKILGKSKR"
     gene            3774..4874
                     /gene="aroC"
                     /locus_tag="WHR07_000665"
     CDS             3774..4874
                     /gene="aroC"
                     /locus_tag="WHR07_000665"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEZ2129911.1"
                     /translation="MAGNTFGQLFTVTTFGESHGAGLGCIIDGCPPGLELSEADIQFD
                     LDRRKPGTSRHVTQRRETDQVEILSGVFKGKTTGTPIALLIRNTDQRSKDYGNIAQSF
                     RPGHADYTYWHKYGTRDYRGGGRSSARETAARVAAGAVAKKWLKEKFGTEITAYVTQV
                     GEKEIRFEGCEHISQNPFFAANHSQIAELENYMDSVRKSLDSVGAKLHIEAANVPVGL
                     GEPVFDRLDAEIAYAMMGINAVKGVEIGAGFDSVTQRGSEHGDELTPQGFLSNHSGGI
                     LGGISTGQDICVNIAIKPTSSIATPRRSIDINGNPIELATHGRHDPCVGLRAAPIAEA
                     MLALVLIDHALRHRAQNADVAVDTPDIARSDK"
     gene            4965..5390
                     /locus_tag="WHR07_000666"
     CDS             4965..5390
                     /locus_tag="WHR07_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmoprotectant transport activator ProQ"
                     /protein_id="HEZ2129912.1"
                     /translation="MTQETALGAALKSAVQTMSKKKQTEMIADHIYGKYDVFKRFKPL
                     ALGIDQDLIAALPQYDAALIARVLANHCRRPRYLKALARGGKRFDLNNRFKGEVTPEE
                     QAIAQNHPFVQQALQQQSAQAAAETPSVEAEAAESSAAE"
     gene            complement(5464..7449)
                     /gene="parE"
                     /locus_tag="WHR07_000667"
     CDS             complement(5464..7449)
                     /gene="parE"
                     /locus_tag="WHR07_000667"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HEZ2129913.1"
                     /translation="MAKNNQYSESSITVLKGLEPVKERPGMYTRTDSPTHICQEVIDN
                     AADEALGGFATAIDVQIHEDGSLSVRDNGRGIPVGLHPEEGVPVVELVFTRLHAGGKF
                     NKKDGGSAYAFSGGLHGVGVSVTNALSTRLEVTVKREGKIHRIVFAGGDVVEPLAQVG
                     KCAVKDSGTEVRVWPDGKYFESPNYSIPELERLLRAKAVLLPGVRVSLTRPVKGEDEA
                     HTQTWHYPDGLKSYLTDLIADAQEAVPIFSCENYISDGHNGDFSIGEGAAFALTWLEE
                     GSCANESYVNLIPTPLGGTHEAGLKQAVFNAVSNFINLHNLLPRGVKVQSDDVFGKTA
                     FVLSARVLDPQFQGQTKDKLTNRDALKLVATVSGDPLELWLNQNVDFGKKIAELAIRQ
                     AQARMRSVKKIEKKKGSGVAVLPGKLTDCESEDIRENELFLVEGDSAGGSAKLARDKA
                     TQAILPLRGKVLNSFEVHPDQLFGNAEIHDISVAIGVDPHGINDHPDLSGLRYGKIAI
                     LSDADVDGSHIQVLLLTLFYRHFPKLVADGHIYVAQPPLFRVDVNAQGKSKPARKFYA
                     LDQNELDGILERLQKEGVKETAYSISRFKGLGEMNPDQLKDTTMHPDTRRLLQVQIPE
                     GADDETRDIFVKLMGKGEAAARRAWMEREGDTAELDI"
     gene            complement(7516..8040)
                     /locus_tag="WHR07_000668"
     CDS             complement(7516..8040)
                     /locus_tag="WHR07_000668"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HEZ2129914.1"
                     /translation="MLDREGYRPNVGIILTNNRDEVFWGKRVREHSWQFPQGGIKPGE
                     SPETAMYRELYEEVGLLSQHVKIVGRTRDWLRYDVPNNWVRREWRGSYRGQKQIWYLL
                     RLTGRDCDVNLRATRHPEFDGWRWHQYWAPVDEVIDFKRDVYLGALKELSSRFLRGME
                     SYEDFAARQLSGNR"
     gene            8205..9500
                     /gene="serS"
                     /locus_tag="WHR07_000669"
     CDS             8205..9500
                     /gene="serS"
                     /locus_tag="WHR07_000669"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEZ2129915.1"
                     /translation="MLDIQLLRSNTAAVAERLARRGYDFDTARFDALEERRKSVQVKT
                     EELQASRNSISKQIGALKGQGKHEEAQAAMDQVAQIKTDLEQAAADLEAVQKELDAWL
                     LSIPNLPHEDVPFGKDETENVEVRKVGTPREFDFEIKDHVDLGEPLGLDFEGGAKLSG
                     ARFTVMRGQIARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDL
                     FHVTRGGDETKTTQYLIPTAEVTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGK
                     DTRGLIRQHQFDKVEMVQIVHPEKSYEALEEMVGHAENILKALELPYRVITLCTGDMG
                     FGATKTYDLEVWVPAQNTYREISSCSNCEDFQARRMKARFKDENGKNRLVHTLNGSGL
                     AVGRTLVAVLENHQNADGSINIPAALQPYMGGVAKLEVK"
     gene            complement(9578..10576)
                     /locus_tag="WHR07_000670"
     CDS             complement(9578..10576)
                     /locus_tag="WHR07_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HEZ2129916.1"
                     /translation="MKIAIYGTKSYDREHFTRANRHFGFELEFFDFMLDAKTAKMAEG
                     AEAVCIFVNDDGSRPVLEKLAQIGVKTVALRCAGFNNVDLKAAEELGLKVVRVPAYSP
                     ESVAEHTVGLMLTLNRRIHKAYQRTRDANFSLEGLTGFNMYGKTAGVIGTGKIGIATM
                     RILKGFGMNLLAHDPFCNPEAEKIGGRYVDLDELYAQSDIITLHCPATPENHYMLNEA
                     AFDKMKDGVMIINTSRGGLIDSAAAIEALKRRKIGALGMDVYENERELFFEDKSNDVI
                     TDDVFRRLSSCHNVLFTGHQAFLTEEALGNISEVTLSNIREVGQTGDCGNAVRADG"
     gene            complement(10701..11777)
                     /gene="prfA"
                     /locus_tag="WHR07_000671"
     CDS             complement(10701..11777)
                     /gene="prfA"
                     /locus_tag="WHR07_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003790927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEZ2129917.1"
                     /translation="MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAE
                     LTPVVEVFQNYRLAQSDLADAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLP
                     KDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYK
                     EVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELN
                     PADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAA
                     RLNDAQKREAQAKEAAERKSLIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMD
                     GDLAEITDALIAEHQAELLAAMGD"
     gene            complement(11867..12637)
                     /locus_tag="WHR07_000672"
     CDS             complement(11867..12637)
                     /locus_tag="WHR07_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEZ2129918.1"
                     /translation="MRLTDTHCHLADSVLRGNLAQVLAEARQAGVWRFIVPATRPQDW
                     QSVAELSEMPSEHGQIRIALGIHPWFSDGIAERDCVRLETMLARYPQAWVGEIGLDFY
                     DKTQTPPQRERQIQVFVRQLAIAQTLRRRVIIHNLKATADIAAAVKQTGFAQGGIVHA
                     FSGSAEEARVLTKLGFKIGIGSLLLNPNARKVRDTLKALNDGDFVLETDSPFMLKKEI
                     NTPANILRIAEIAAQIRGTGAAEIAAITERNADSLLRP"
     gene            complement(12640..13632)
                     /locus_tag="WHR07_000673"
     CDS             complement(12640..13632)
                     /locus_tag="WHR07_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HEZ2129919.1"
                     /translation="MKQKIFVLYTGGTIGMTQSSEGLRPDTALVGQALAPFSNGMDFD
                     WHVCGTLIDSSAVQLQNWCAWLDIIATALPQYDGVLVLHGTDTLAYTANLFALALQGL
                     DKPIVLTGSQWPYNAVGSDAPRNLATAVAAFPLGLKQTLIAFDGKLYPAVGSSKVSTE
                     TAAGFDNPHFGALAEWDETQGWHNVRIPNQDTADVSDGLKIRYPDPQAKIAVRTLIPG
                     FAVQELADGLGQLPAHALILQSYGHGNTPADEGFIRAVQDFTQQGRLLLNISQVRQGR
                     TAAVYAQGNAFRNSGIINGGKCNLETATALMTLAVSEGWGADEVKHELQRLGLV"
     gene            complement(13699..14382)
                     /locus_tag="WHR07_000674"
     CDS             complement(13699..14382)
                     /locus_tag="WHR07_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEZ2129920.1"
                     /translation="MFALLEAFFVEYGYAAVFFVLVICGFGVPIPEDLTLVTGGVISG
                     MGYTNPHIMFAVGMLGVLVGDGIMFAAGRIWGQKILKFKPIARIMTPKRYAQVQEKFD
                     KYGNWVLFVARFLPGLRTAVFVTAGISRKVSYLRFLIMDGLAALISVPVWIYLGEYGA
                     HNIDWLMAKMHSLQSGIFIALGVLAAALAWFWWRKRRHYQLYRAQLSEKRAKRKAEKA
                     AKKAAQKQQ"
     gene            complement(14571..15905)
                     /gene="glmM"
                     /locus_tag="WHR07_000675"
     CDS             complement(14571..15905)
                     /gene="glmM"
                     /locus_tag="WHR07_000675"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEZ2129921.1"
                     /translation="MAKKYFGTDGVRGEVGQFPITPDFVLKLGYAAGQVLVQHDTDQK
                     PTVLIGKDTRISGYMLEAALVAGFTAAGVNVVQTGPLPTPGVAYLTRALRLSAGVMIS
                     ASHNAYSDNGIKFFAEGGVKLSDEIELEIEAKIDEEMKTQPSARLGRARRISGADDRY
                     IEFCKSTFPSHSDLRGLKLVIDTANGAGYGVAPKVFHELGAQVVSIGDEPNGYNINEK
                     CGATYTKTLQAAVLQHEADYGIALDGDGDRLMMVDKNGKVYDGDSLIYVIAKARAREG
                     INIGGVVGTVMTNMAMEIALKEQGVDFCRAKVGDRYVLAQLNQRSWLIGGEASGHILC
                     MDKHNTGDGIISALQVLAALQTLNQDLATVCADWQPYPQTMINVRIQKGQKWQEASKD
                     VLAEVEKELEGKGRVVLRASGTEPVVRVMVEARQADWARDGAERIASAIGSL"
     gene            complement(16035..16886)
                     /gene="folP"
                     /locus_tag="WHR07_000676"
     CDS             complement(16035..16886)
                     /gene="folP"
                     /locus_tag="WHR07_000676"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEZ2129922.1"
                     /translation="MARHGWQAGRFEIGLDKPKIMGIVNLTPDSFSDGGAYSQNAKTA
                     LAHAERLLKEGADILDIGGESTRPGADYVSSEEEWARVEPVLVEVAGWGVPVSLDTRR
                     TVVMEKALALGGIDIINDVAALTDEGAVELLARQTDTGICLMHMQGLPETMQINPKYQ
                     DVVGEVARYLKARAAECIAAGIAPQRITLDPGFGFGKTLQHNIALMRHLPELMAETGF
                     PLLIGVSRKRMIGELTGEADAAARVHGSVAAALASVARGAQIVRVHDVKATADALKAW
                     EALGINL"
BASE COUNT         3728 a         4741 c         4544 g         3899 t
ORIGIN      
        1 tcccataaaa aaacggagca gatacctgcc ccgtttttat ttaatccgaa attttaatct
       61 aaatttagaa ttttgcaccg gattggtttg ccatatagtc aacagccgct ttgacttcgt
      121 catcgctcaa accggcattg ccgcctttgg ccggcatcgc gttaaagcct tcaagggcgt
      181 gtttgtgcaa ggtttctttg ccttttttga tacgcggtgc ccaatcgtct tttttgccta
      241 tgccgggaat accgggaatc gaaccgccgt ggcacacctg acaggttgct tcgaagactt
      301 ttttaccgtc aacgccgacc gcaggggctg ccgcaccctt gtcttctgcc ttcgcttctg
      361 ccggagctgc actatcggca ggagcagaag ctgttcctga agcggcattg tcggcaggcg
      421 cagcctcatc aggattcggg aaagaaccgc cgcttttgtt cgccatgtaa gtaatcgccc
      481 gtttgagttc ctgatcggtc aggtctgccg caccgccttt ggcaggcatg gcgttaaagc
      541 cgttcagcgc gtgttggaac aaggtatcga agccttgcgc gatacgcggt gcccaatcgc
      601 cgttgtgttc cagtttcgga gcgttcggca cattgctgtc cgccgcgtgg cattggatac
      661 agattttgcc gaaaatctgt tcgccttggc gttcgccgac ggggatgccg tcgcccatcg
      721 tcaattgtcc gacaggctgg atacgggtct gcgttgctgc ttccgtagtg gcatcgacat
      781 cgccgaacga gccgctgccc gccagcttaa tcaggaaata aaggactgca ataacaataa
      841 cgataccgct cacaagggta aacagtgcag agccttgggc tttgttgtcg cggagttgtt
      901 tcatttggta ggcctcgccg tcaggttagg ttgtgctgta aattatagtt tggtgtgtta
      961 aacgcagtta acaatatttt gctggattat actgaattca cagggtcttt ccaatcgcta
     1021 tcattgaaaa tatgaaaaaa tttgccaacg gtatctgtat aaaacaaata atcctttgaa
     1081 aataatggtt tatcctcaag aaaactctcc ttatgccgcc atacgccgcc tgccggcgca
     1141 agataacctt tgccaatttg cagaatttac gttaacctta cgttttacgc acccatagct
     1201 cagttggaag agtgtcagtt tccgaagctg gaggtcacag gttcgatccc tgttgggtgc
     1261 gccaattata aagagaccgt ctgaaagata aatatttttc agacggtctt ttgacttact
     1321 tcaaactctt atttcaagac ttccgcaaat gcgcgggcaa catagtcggt attcgacgta
     1381 ttcagtccgg cgacgcacat cctgccggaa tccagcaggt aaacggcaaa ttcgtcgcgc
     1441 agcctgcgga cttgttccac gctcaatcct gtgtagccga acatgccgcg ctgtttgatg
     1501 aaataagtga aatcgcgatc ggggatttgc gcagttaaga catcataaag tttctgccgc
     1561 atcgcacgga tgcggtcgcg catcatataa acctcgtttt gccacaaggc gtaaagttcg
     1621 gggctgttca tcacgtcggc ggcgatatac gcgccgtgcg cgggcgggct ggagtagatg
     1681 cggcggacgg tgaatttgag ctgtccgaac accaaatccg cttcttcctt attcgggcaa
     1741 accacgctca ggccgccgac gcgctcgccg tagagcgaca ggttttttga gaaggaattg
     1801 ctgacgaaca agggcaattc catttccacc gctttgcgga cggcgtaggc atcgctgtcc
     1861 aaatcgccgc cgaagccttg gtaggcgatg tccataaacg gaatcagttt gcgcgttttg
     1921 atgatgtgca acacttcgtc ccattgttgt tccgacatat ccacgccggt cgggttgtgg
     1981 cagcagggat ggaggatcag gacgctgttt tcgggcaggg tgttgaaaaa cgcggtcatt
     2041 tcgtcgaatt tcacgccgac ggcagcaggg tcgtaatatg ggtaagtgcc gacctcgaaa
     2101 cctgcgcttt caaaaatgcc gcgatggttg tcccaagtcg ggtcgctgac gtaggcgcgc
     2161 gcttcgggaa accagcggtg cagaaagtcc gccccgactt tgagcgcgcc tgagccgccc
     2221 aaggtttgta cggtagcgat gcgtccttgc gcgagcgcgg ggttgtcttt gccgaacaac
     2281 aaatgctgca ccgcgctgcg gtaagtgtct aagccttcca tcggcaggta gggcgacggc
     2341 acaggagtgg cggcgcgggc ggtttcggcg cggctcacgg attccaacac gggcattttg
     2401 ccttcgtcgt cgaaataaat gcctatgctc aaattgactt tttcggggcg cgggtcgttt
     2461 ttgaaggttt cgaccaaact caaaatcgga tcgccgggat agtattcgat gtgtcggtac
     2521 atagtcctta cctcttgctt tttccaagga ttttcttttt caacagcaca ccgctttcaa
     2581 tatggtgcgt aaacggaaat tgatcgaaca gggcggcacg ttcaaccgta tgggtttccg
     2641 ccaaggtgtc caaattggta cgcagcgttt cgggattgca ggaaatgtag atgatgttgt
     2701 caaactgcga caccagcttc aaagtttcct catcgatacc ggcacgcggc ggatcgacga
     2761 aaatagtgga aaatgcgtaa tccgtcaaag caataccgcc atccttaagg cgtttaaact
     2821 cacgttttcc ggtataggct tcggtaaatt cttcagcaga cagacgggcg attttgatgt
     2881 tgccgatgcg gttggcttcg atattccatt gcgccgcgct gacggaggtt ttggagattt
     2941 cggttgccaa aacacgttca aacttttcag ataaaggaag cgtaaagttg ccgtttccgc
     3001 aatacagttc gagcaaatcc ccatccaatc cttctgctgc accgcaggcc cattcaagca
     3061 ttttctgaca cacggcggca ttcggttggg taaaactgcc ttcaatttgc cgataacgga
     3121 aatcccggtt gccgaccttc aaagtttccg ttacatagtc ctgttttaag actattttct
     3181 gtcccctgct ccgcccgatg acggaaatat ccaactgttg ctgtaacgct tgcgccgcct
     3241 gcatccactc attatcaagc cttttgtggt aaatcatggt aaccagcatt tccccgctga
     3301 gcgtagacaa aaattcgacg gcataccaac ggtttctcag ttcggcagat tgggcggcaa
     3361 cggcaatcaa ttctggcatc aggcggttga cggcttcgga agccgcttca aaacggtcgc
     3421 aacggatcag gcttgccccg ccagcctttt gtcctttttc aaacatggca taaaacattt
     3481 caccgccttc gtgccaaata cggaactcgg cacgcatacg gtaatgtttg tccggagatt
     3541 cgtacacttc ccactcagga acatccaaac ctgcaaaaag ggttttaagg tggtcttttt
     3601 tatcttgaag ctgctgcgtg tagtcgctca tatcgctatc ctgaaaaatc agaccggatt
     3661 ataagccgat tcactgcaaa acacgcaacc cctttaccgg catataaccc gttttcctcc
     3721 aacttttatg ctaaaatccg ccgtctccaa cataccgccg acagaaggaa aatatggcag
     3781 gcaacacttt cggacaactc ttcaccgtga ccacgttcgg cgaaagccac ggcgcaggtt
     3841 tgggctgcat catcgacggc tgcccgcccg gcttggaatt aagcgaagcg gatatccaat
     3901 ttgacctcga ccgacgcaaa cccggcacca gccgccacgt tacccaacgc cgcgaaaccg
     3961 accaagtaga aatcctctcc ggcgtattca aaggcaaaac caccggcacg cccatcgccc
     4021 tcttaatccg caataccgac cagcgcagca aagactacgg caacatcgcc caaagtttcc
     4081 gccccggcca tgccgactat acctattggc acaaatacgg cacgcgcgac taccgcggcg
     4141 gcggcaggag ctccgcccgt gaaaccgccg cccgcgttgc tgccggagcc gttgccaaaa
     4201 aatggttgaa agaaaaattc ggcacggaaa tcaccgccta cgttacccaa gtcggcgaaa
     4261 aagaaatccg gtttgaaggc tgcgaacaca tttcccaaaa tccttttttt gccgccaacc
     4321 atagccaaat tgccgagctg gaaaactata tggacagcgt gcgcaaatcg ttggattccg
     4381 tcggcgcgaa gctgcatatt gaagccgcca atgtccccgt cggcttgggc gaacccgttt
     4441 tcgaccgcct cgatgccgaa atcgcctacg cgatgatggg catcaacgcc gtaaaaggcg
     4501 tggaaatcgg cgcaggtttt gacagcgtaa cgcaacgcgg cagcgaacac ggcgacgaac
     4561 tgaccccgca aggcttcctg tccaaccatt cgggcggcat cctcggcggc atcagtaccg
     4621 ggcaagacat ctgcgtcaat atcgccatca aacccaccag ctccatcgcc accccgcgcc
     4681 gcagtatcga catcaacggc aaccccatcg aactcgccac gcacggcagg cacgacccct
     4741 gcgtcggctt gcgcgccgcg ccgattgccg aagctatgct cgccttggtt ttaatcgacc
     4801 acgccctgcg ccatcgtgcg caaaatgcgg atgttgccgt ggatacgccc gatatcgccc
     4861 gctcggacaa gtaaaaagat ttagccaaaa cacgggcttt atactaaaat accgaccatt
     4921 gccgtgccgt ctgaacgcac gattcttaga ggaatacaac cgaaatgaca caagaaaccg
     4981 ctttgggtgc ggcactgaaa tccgccgtcc aaactatgag caaaaagaaa cagaccgaaa
     5041 tgatcgccga ccacatctac ggcaaatacg atgtgttcaa acgcttcaaa ccgttggcac
     5101 tcggcatcga tcaggatttg attgccgctt tgccgcaata cgatgccgca ctgattgcac
     5161 gcgtcctcgc caaccactgc cgccgtccgc gctatctgaa agccttggcg cgcggcggca
     5221 aacgtttcga tttgaacaac cgtttcaaag gcgaagttac ccccgaagaa caggcgatcg
     5281 cgcaaaacca tcctttcgtg cagcaggctt tgcaacagca gtccgcccaa gctgccgccg
     5341 aaacgccgtc tgttgaagcc gaagcagccg aatcttccgc agcagaataa atccccaaat
     5401 gaaatgccgt ctgaaaaccg atttggtttc agacggcatt tttccgtatg cggcaatcac
     5461 ggttcaaata tcgagttccg ccgtatcgcc ttcgcgctcc atccaggcac ggcgggcggc
     5521 ggcttcgcct ttgcccatca gtttgacgaa gatgtcgcgc gtctcgtcat ccgcgccttc
     5581 ggggatttgt acctgcaaca ggcggcgggt gtcggggtgc atggtagtat ctttgagctg
     5641 gtctgggttc atctcaccca aacctttgaa acggctgatg gaataagcag tttctttaac
     5701 gccttctttt tgcagccgct ctaaaatgcc gtcaagttcg ttttggtcga gggcgtagaa
     5761 tttgcgggcg ggtttgcttt taccttgtgc gttgacatct acgcggaaca gcggcggctg
     5821 ggcgacgtag atgtgtccgt cagcgaccag tttcgggaag tggcggtaga acagggtcag
     5881 cagcaaaact tgaatatgcg agccgtccac gtcggcatcg gacaggatgg cgattttgcc
     5941 gtaacgcagg ccgcttaaat cgggatggtc gttgatgccg tgcggatcga cgccgatggc
     6001 aactgaaatg tcgtggattt cggcgttgcc gaagagctgg tcggggtgga cttcaaagct
     6061 gttgagcact ttgccgcgca ggggcaggat ggcttgggtg gctttgtcgc gggcgagttt
     6121 ggcggagccg ccggcggaat cgccttcgac gaggaagagt tcgttttcgc ggatgtcttc
     6181 gctttcgcag tcggtcagct taccgggcag gacggcgacg ccgctgcctt ttttcttttc
     6241 aatcttttta accgaacgca tccgcgcctg tgcctgacgg atggcgagtt cggcgatttt
     6301 tttgccgaag tccacgtttt ggttcagcca caattccaaa gggtcgcccg atacggtagc
     6361 aacgagtttc agcgcgtcgc ggttggtcag tttgtctttg gtctgacctt ggaactgcgg
     6421 gtcgaggaca cgggcagaga ggacaaaggc ggttttgccg aacacgtcgt cgctttgcac
     6481 tttcacgccg cgtggtaaaa ggttgtgcag attgatgaag ttgctgacgg cgttgaacac
     6541 ggcttgtttc aagcccgctt cgtgcgtgcc gcccagcggg gtggggatga ggttgacgta
     6601 gctttcgttg gcgcacgagc cttcttccag ccaggtcagg gcaaacgcgg cgccttcgcc
     6661 gatgctgaaa tcgccgttgt ggccgtctga aatgtagttt tcgcaagaga agataggcac
     6721 ggcttcctgc gcgtcggcaa tcaggtcggt cagatagctt ttcagaccgt cggggtaatg
     6781 ccaggtttgg gtgtgcgctt cgtcttcgcc tttgaccgga cgggtcaggg aaacgcgcac
     6841 gcccggcagc agcacggctt tggcgcgcag caggcgttcg agttcgggga tgctgtaatt
     6901 cgggctttca aaatatttgc cgtccggcca gacgcgcact tcggtgccgc tgtctttgac
     6961 ggcgcatttg cccacttgtg ccaacggttc gaccacgtcg ccgccggcaa acacgatgcg
     7021 gtggattttg ccttcgcgtt tgaccgttac ctcaaggcgg gtggaaaggg cgttggtcac
     7081 ggatacgccc acgccgtgca ggccgcctga aaaggcatac gcgctgccgc cgtctttttt
     7141 gttgaacttg ccgcccgcgt gcagacgggt gaacacgagt tcgactacgg gtacgccttc
     7201 ttcagggtgc agaccgacgg gaataccgcg gccgttgtcg cgtacggaaa gcgaaccgtc
     7261 ttcatgaatt tgcacgtcga ttgccgtagc gaaaccgccc aacgcctcgt ccgccgcgtt
     7321 gtcgatgact tcttggcaga tatgggtcgg gctgtcggtg cgggtgtaca taccgggacg
     7381 ttctttgacc ggttccaaac ctttgaggac ggtgatgctg gattcgctgt attggttgtt
     7441 tttagccata ggaataatct gaaagtaaga aaaacaacgc tttcagacgg cctgaaagcg
     7501 ttgcgttccg ttgttttacc ggttgccgga aagttggcgg gcggcaaagt cttcataact
     7561 ttccataccg cgcaggaagc gggaagaaag ttctttcaat gcccccaaat aaacgtcgcg
     7621 tttgaaatca atcacttcgt caacgggcgc ccaatattgg tgccaacgcc agccgtcaaa
     7681 ttcggggtgg cgggtggcgc gcaggttgac atcgcaatcc cggccggtca ggcgcaggag
     7741 ataccaaatc tgcttctgcc cgcgataaga gccgcgccat tcgcggcgta cccagttgtt
     7801 cggcacgtcg taacgcagcc agtcgcgcgt ccgcccgacg attttgacgt gttgcgacag
     7861 aagtccgact tcttcgtaaa gctcgcggta catcgcggtt tcggggcttt cgcccggctt
     7921 gatgccgcct tgcggaaact gccaagaatg ttcgcgcacg cgcttacccc aaaagacttc
     7981 gtcgcggttg ttggttaaga tgataccgac attggggcga tagccttccc tgtccaacac
     8041 ggtgtcgccc tccgttaaat tcaatcttgg gattttccca caaatcgaac ggttttgaca
     8101 aatcagacgg tatggttcaa gcatgtcgaa acacagacgg actcgggaaa atatcttaaa
     8161 tttggtttac aataatgtgt ttcaaattat tcgggaatca gaccatgtta gacatccaat
     8221 tgctccgcag caacaccgcc gccgttgccg aacggcttgc acggcgcggt tatgactttg
     8281 ataccgcacg ttttgacgca ctggaagaac gacgcaagtc cgttcaggtg aaaaccgaag
     8341 aattacaagc ctcgcgtaac agcatttcca agcaaatcgg cgcactgaaa ggtcagggca
     8401 aacacgaaga ggcacaggcg gccatggatc aagtcgccca aatcaaaacc gatttggaac
     8461 aggcagccgc cgatttggaa gccgtgcaaa aggaactgga cgcatggctg ttgagcattc
     8521 cgaacctgcc gcatgaggac gtgcctttcg gtaaggatga aaccgaaaac gtcgaagtcc
     8581 gcaaagtcgg caccccgcgc gaatttgact ttgaaatcaa agaccatgtc gatttgggcg
     8641 aacctttggg tttggatttc gaaggtggcg cgaaactttc cggcgcacga tttaccgtga
     8701 tgcgcggaca aatcgcccgt ctgcaccgcg ccttggcaca gttcatgctg gatacgcaca
     8761 cgctgcaaca cggctacacc gagcattaca cgccttatat cgttgacgat acgacgctgc
     8821 aaggtacggg ccaactacca aaatttgcgg aagatctgtt ccacgttacc cgtggcggcg
     8881 acgaaaccaa aaccacccaa tacctgattc cgacagccga agttaccctg accaataccg
     8941 ttgccgacag cattatcccg tccgaacaac tgccgctgaa gctgaccgcg cattcgccct
     9001 gtttccgcag cgaggcgggt tcgtacggca aagacacgcg cggtctgatt cgccagcacc
     9061 agttcgacaa agtagaaatg gtacaaatcg ttcatcccga aaaatcatac gaagcactgg
     9121 aagaaatggt cggccatgcc gaaaacatcc tgaaggcttt ggaactgccc taccgcgtga
     9181 ttaccctgtg taccggcgac atgggcttcg gcgcaaccaa aacgtatgac ttggaagttt
     9241 gggttcccgc gcaaaatacc taccgcgaaa tctcaagctg ctccaactgc gaagatttcc
     9301 aagcccgccg catgaaggcg cgtttcaaag acgaaaacgg caaaaaccgc ttggtacata
     9361 ctttgaacgg ctccggcttg gctgtcggca gaacgctggt cgccgtattg gaaaaccatc
     9421 aaaacgccga cggcagcatc aacatccctg ccgcactgca accgtatatg ggcggcgttg
     9481 ccaagttgga agtgaaataa gtttgcaagc tgcctgaacg tcaaatgccg tctgaaacct
     9541 ggttcagacg gcatttcctt taaactttta aaacacgtca gccgtcggca cgaaccgcat
     9601 tgccgcaatc gccggtctgt ccgacctcgc ggatattgga cagcgtaact tccgaaatat
     9661 tacccaacgc ctcttccgtc aaaaacgcct gatgaccggt aaacagcacg ttatggcagg
     9721 acgacaaccg gcggaacacg tcgtcggtaa tcacatcgtt ggatttgtct tcaaaaaaca
     9781 gctcgcgctc gttctcgtac acatccatgc ccaatgcgcc gattttccgg cgtttcaacg
     9841 cctcaatcgc ggcggcactg tcaatcagcc cgccccggct ggtgttgata atcatcacgc
     9901 cgtctttcat tttgtcgaac gccgcttcgt tcagcatata gtggttttcc ggcgtggcgg
     9961 ggcaatgcag cgtgatgatg tccgactggg catacagctc gtccaaatcc acatacctgc
    10021 cgccgatttt ttccgcttcg gggttgcaaa acggatcgtg agccagcagg ttcatgccga
    10081 aaccctttaa aatccgcatg gttgcaatac cgattttccc cgtgccgata acgcccgccg
    10141 ttttgccgta catattgaaa ccggtcagac cttccagcga aaaattcgca tcgcgggtac
    10201 gctgataggc tttgtggata cggcggttca aagtcagcat cagaccgacc gtatgttccg
    10261 caaccgattc gggcgaatag gcaggcacgc gcacgacttt caagcccaac tcttcagccg
    10321 cctttaaatc cacattattg aagccggcac aacgcaacgc cacagttttc acgccaattt
    10381 gcgccaattt ttccaacacg ggccggctgc cgtcgtcgtt tacaaaaata caaaccgctt
    10441 ccgcgccttc cgccattttc gccgttttcg catccagcat aaaatcaaaa aactccagct
    10501 cgaagccgaa atgccggttg gcgcgggtaa aatgttcgcg gtcatagctt ttcgtaccgt
    10561 aaatcgcaat cttcatcaat atgtccagtt gtcgcctatg gttgagaaac ggcataatac
    10621 actgaattca aacaaatcag tagaatatgg cagattaaaa ttgattgcat gcacggcatt
    10681 tccatttcaa aacacaaaac tcaatcgccc attgccgcca aaagctccgc ctgatgttcg
    10741 gcaatcaggg catcggtgat ttctgccaaa tcgccgtcca tcacaaaatc cagcttgtgc
    10801 agggtgaggt tgatgcggtg gtctgttacc ctgccttggg gatagttgta ggtgcggatg
    10861 cgttcgctgc ggtcgccgct gccgatgagg gatttgcgtt cggcggcttc tttggcttgg
    10921 gcttcgcgtt tttgcgcgtc gttcaggcgg gcggcgagga ctttcatcgc ctgcgctttg
    10981 ttggcgtgtt ggctgcgtcc gtcttggcat tcgaccacca tgcctgtggg caggtgggtg
    11041 atgcggacgg cggaatcggt tttattgatg tgctgcccgc ccgcgccgga tgcgcgaaag
    11101 gtgtcgatgc gaaggtcggc tgggttcagt tcgatgtctt ccagttcgtc cgcttcgggc
    11161 atgacggcaa cggtgcaggc ggaggtgtgg atgcggcctt ggctttcggt ggcggggacg
    11221 cgctgcacgc ggtgtccgcc cgattcaaat ttcaaacggc tgtacgcccc gagtccgaca
    11281 atacgggcga tgacttcttt atagccgccc aattcgcttt cgttggcgga cacgatttca
    11341 acctgccaac ggttgcgctc ggcgtagcgg ctgtacatac gcagcaaatc gccggcaaac
    11401 agcgcggctt cgtcgccgcc cgttccggcg cgtatttcga tgaagatgtt tttgtcgtcg
    11461 tcggcatctt tgggcagcag cagtttttgc agttcggtat cgagttcgcc gattttggct
    11521 ttggccgctt cgatttcttc ggcggcaaaa tctttcattt cggggtcgga cagcatttct
    11581 tcggcatctg ccaagtcgct ttgggcaagc cgatagtttt ggaatacttc gacgacgggg
    11641 gtcagttcgg cgtgttcgcg cgtgagcttg cggtagttgt ccatatcgga tgtggcttcg
    11701 ggttgcccta aaaggtgggt aacttcttcc aaccggtcgc cgagttgttg cagtttttct
    11761 aagatagacg gcttcataat tcttccataa caaacgccgc ctgaatttca gacggcatca
    11821 aaccgcggtc attataatat attttctgaa tattcaaaaa gataatctag ggacggagca
    11881 ggctgtcggc attgcgttcc gttatcgcgg cgatttccgc cgcgccggta ccgcgtatct
    11941 gcgcggcaat ttcggcaatc cgaagaatgt tggcaggcgt attaatctct tttttcagca
    12001 taaacgggct gtcggtttcc aatacgaaat ccccgtcgtt caaggcttta agcgtatcgc
    12061 gcactttacg cgcgttcgga ttgagcaaca acgaaccgat gccgattttg aaacccagtt
    12121 tcgtcaacac gcgcgcttct tccgcgctgc ctgagaaggc gtgaacgatg ccgccttggg
    12181 caaagcctgt ctgtttgacg gcggcggcga tgtcggcggt ggctttgaga ttatggataa
    12241 tcacgcggcg gcgcagggtt tgcgcgatgg caagctggcg gacgaaaact tggatttgcc
    12301 gttcgcgctg cggcggcgtt tgggttttgt cgtaaaaatc caagccgatt tcgccgaccc
    12361 atgcctgcgg ataacgtgcc aacatcgttt ccaggcggac gcaatcacgc tcggcaatgc
    12421 cgtctgaaaa ccaaggatgg atgccgagcg caatacggat ttgaccgtgt tcggacggca
    12481 tttccgacag ttccgccacg ctttgccaat cctgcgggcg cgtcgcggga acgataaacc
    12541 gccacacacc cgcctgtcgc gcttcggcaa gcacctgcgc cagattgccg cgcaaaacag
    12601 aatcggcaag atggcaatgt gtgtcggtca gcctcatctt cacaccagcc ccaaccgctg
    12661 caactcgtgt ttcacctcgt ccgcgcccca tccttcagaa acggcaagcg tcatcaatgc
    12721 ggttgcggtt tccaaattgc atttgccgcc gttgatgatg cccgagttgc ggaacgcatt
    12781 gccttgcgcg taaacggcgg cagttctgcc ttgtcggact tggctgatgt tgagcagcag
    12841 cctgccttgc tgcgtgaagt cttgcacggc gcggataaag ccttcgtctg ccggggtgtt
    12901 gccgtgcccg tagctttgca ggataagggc gtgggcggga agctgtccga gtccgtccgc
    12961 aagttcttgg acggcaaagc cggggataag cgtgcggaca gcgatttttg cctgaggatc
    13021 gggataacgg attttgaggc cgtctgaaac atctgccgtg tcctgattcg ggatgcggac
    13081 attgtgccag ccctgggttt cgtcccactc cgccagtgcg ccgaaatgcg gattgtcgaa
    13141 accggcggcg gtttcggtgc tgactttgct gctgccgacg gcgggataaa gtttgccgtc
    13201 aaaggcaata agcgtctgct tcaatccgag tgggaatgcg gcaacggcag tcgccagatt
    13261 gcgcggcgcg tcgctgccca cggcgttgta cggccattgg gagccggtca ggacgattgg
    13321 cttgtccaaa ccctgcagcg cgagggcgaa cagattggcg gtataggcga gcgtgtccgt
    13381 gccgtgcagc accaaaacgc cgtcgtactg cggcagcgcg gtggcaatga tgtccagcca
    13441 agcgcaccag ttttgcagtt ggacggcgga agaatcaatc agcgtcccac aaacgtgcca
    13501 atcgaaatcc atgccgtttg aaaacggcgc gagtgcctgc ccgaccagcg cggtatcggg
    13561 gcgcaggcct tcgctgcttt gcgtcatgcc gatggtgccg ccggtataaa ggacaaaaat
    13621 tttctgtttc atggctcatc ctgaaaatgc aaagaccgcc tgaaacgcga aatgcgtccg
    13681 gacggtcgaa aatctgattt actgctgctt ctgtgccgct tttttcgctg ccttttccgc
    13741 cttgcgtttg gcgcgttttt cgctcaattg tgcgcggtaa agctgataat gtcggcgttt
    13801 gcgccaccag aaccacgcca gcgccgccgc cagcacgccc aatgcgatga agatgccgga
    13861 ttgcaggctg tgcattttcg ccatcagcca atcgatgttg tgcgcgccgt actcgcccaa
    13921 gtaaatccaa acgggcacgg aaatcagcgc ggcaagcccg tccataatca gaaagcgcag
    13981 atacgatact ttgcggctga tgccggcggt aacgaaaacg gcagtccgca aacccggcag
    14041 gaaacgagcg acaaacagaa cccagttgcc gtatttgtcg aatttttcct gaacctgtgc
    14101 gtaacgtttc ggcgtcatga tgcgcgcaat cggtttgaac ttgaggattt tctgccccca
    14161 gatgcgtccg gcggcgaaca tgatgccgtc cccgaccaat acgccgagca taccgactgc
    14221 aaacataata tgcggattgg tataacccat acccgaaatc acgccgcctg ttaccaaggt
    14281 caaatcctcg ggaatcggca cgccgaaacc gcagatgacc aaaacgaaaa acacggccgc
    14341 atagccgtat tcgacaaaaa aggcttccaa aagggcaaac atagcggata ttccattgtc
    14401 ggagataaaa agtcagaaca agccgaaaca ttttctgcgc gaaacggcat tctatcaaag
    14461 attatgccgt ctgaaagcgg caaggggcag attcgcgccc tctgccggac gttcagacgg
    14521 catttaaaca ggaaaaccgc cgctgttgaa acggttttgc ctgattttgc ctaaaggctg
    14581 ccgatggcgg aagcaatacg ttccgcaccg tcgcgcgccc aatccgcctg ccgcgcctcc
    14641 accatcacac gcacgacggg ttcggttccc gaagcgcgca acacgacacg ccctttgcct
    14701 tcgagttctt tttccacttc cgccaacacg tcttttgagg cttcctgcca tttctgacct
    14761 ttttggatgc gcacgttaat catcgtttgc ggatacggct gccaatcggc gcaaacggtg
    14821 gcgaggtctt ggttcagcgt ttgcagtgcc gccaaaactt gcagcgcgga aataatgccg
    14881 tcgccggtgt tgtgtttgtc catgcacaaa atatggccgc tggcttcgcc gccgatgagc
    14941 cagctgcgtt ggttcagctg tgccaacaca tagcggtcgc cgactttggc gcggcagaaa
    15001 tccacgccct gctctttcag ggcgatttcc atcgccatat tggtcatgac cgtgccgacc
    15061 acgccgccga tgttgatacc ttctcgggcg cgggctttag caatgacgta aatcaggctg
    15121 tcgccgtcgt aaaccttacc gtttttatcg accatcatca ggcggtctcc gtcgccgtct
    15181 aaggcgatgc cgtagtcggc ttcatgctgt aaaacggctg cctggagtgt cttggtataa
    15241 gtcgcaccgc atttttcatt gatattgtag ccgttgggtt cgtcgccgat gctgacgact
    15301 tgtgcgccca gttcgtgaaa caccttgggt gcgacaccgt accccgcgcc gttggcagta
    15361 tcgataacca acttcaaacc ccgaaggtcg gaatggctgg gaaaggtaga tttgcaaaat
    15421 tcgatatagc ggtcgtccgc accactgatg cggcgtgcgc gaccgaggcg tgcagaaggc
    15481 tgggttttca tttcttcgtc gattttggct tcgatttcca actcgatttc atcgctcagt
    15541 ttcacgccgc cctcggcaaa gaatttgatg ccgttgtcgg aataggcgtt gtgcgacgcg
    15601 gaaatcatca cgccggcgga caggcgcaac gcgcgggtca gataagccac gccgggcgtg
    15661 ggcagcggtc cggtctgtac cacattcaca cccgccgccg taaaaccggc caccaaagcg
    15721 gcttccagca tatagccgga aatgcgcgtg tctttgccga tgaggacggt cggtttctgg
    15781 tcggtgtcgt gctgcaccaa aacctgcccc gccgcatagc cgagtttcaa tacgaaatcg
    15841 ggcgtaatcg gaaattgccc cacttcgccg cgcacgccgt ccgtgccgaa atattttttt
    15901 gccatgtgtt gctccgagaa tgtggaccgt tgtccgagat tatacagtca gtttatgcct
    15961 tgctgtctgc accgttgatg ccgtctgaag ccgccccgtc cttttcagac ggcatgaagt
    16021 atgcgaaccg ctgtttacag attgatgccc aacgcttccc atgccttcaa cgcatccgcc
    16081 gtcgccttca catcatgcac ccgcacgatt tgcgcgccgc gcgccacgga agccagtgcc
    16141 gccgccacgc tgccgtgtac gcgcgccgcc gcgtctgcct cgccagtcag ctcgcctatc
    16201 atacgtttgc gcgacacgcc gatgagcagc ggaaaacccg tttccgccat caattcgggt
    16261 aaatgccgca tcagtgcgat attgtgttgt aaggttttgc cgaaaccgaa accggggtcg
    16321 agtgtgatgc gttgcggggc gatgcctgcc gcgatgcatt ccgccgcccg cgctttcaaa
    16381 taccgcgcca cttcaccaac aacatcctga tatttcggat taatctgcat ggtttcaggc
    16441 aaaccctgca tatgcatcag gcaaataccc gtgtccgtct ggcgcgccag caattcgacc
    16501 gcgccttcgt cggtcaacgc cgccacatcg ttaataatat cgatgccgcc gagtgccaac
    16561 gctttttcca taaccaccgt gcggcgcgtg tccaaactga cgggaacgcc ccatcccgcg
    16621 acttctacca atacaggctc aacccgcgcc cattcttctt cggacgaaac ataatccgca
    16681 cccggccgcg tcgattcgcc gccaatgtcg agaatgtccg caccctcttt caaaagccgt
    16741 tcggcgtgcg ccaaagcggt tttggcattt tgcgaatacg cgccgccgtc ggaaaaagaa
    16801 tcaggcgtga gattcacgat gcccataatt ttcggcttgt ccaaaccgat ttcaaaccgt
    16861 cctgcctgcc aaccgtgtcg tgccatctga actcctccca aaataaaaaa ac
//
LOCUS       DAWGKF010000029        16637 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.029, whole genome shotgun sequence.
ACCESSION   DAWGKF010000029 DAWGKF010000000
VERSION     DAWGKF010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16637)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16637)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16637
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.029"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(51..1220)
                     /locus_tag="WHR07_000677"
     CDS             complement(51..1220)
                     /locus_tag="WHR07_000677"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEZ2129923.1"
                     /translation="MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAET
                     LVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPD
                     IAQGVNEGEGIDLNQGAGDQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGLL
                     PWLRPDAKAQLTVVYDSESGKVKRIDTVVLSTQHDPEIGYEELKNAVIEQIIKPVLPS
                     ELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVD
                     RSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLITLV
                     REHFDLRPKGIVQMLDLLRPIYSKSAAYGHFGREEPEFTWERTDKAAALRAAAGL"
     regulatory      complement(1403..1513)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01725"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitches modulate the expression of
                     downstream genes in response to levels of
                     S-adenosylmethionine; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF01725"
     gene            1566..2462
                     /locus_tag="WHR07_000678"
     CDS             1566..2462
                     /locus_tag="WHR07_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEZ2129924.1"
                     /translation="MFRLQFGLFPPLRTAMHILLTALLKCLSLLPLSCLHTLGNRLGH
                     LAFYLLKEDRARIVANMRQAGMNPDPKTVKAVFAETAKGGLELAPAFFRKPEDIETMF
                     KAVHGWEHVQQALDKHEGLLFITPHIGSYDLGGRYISQQLPFPLTAMYKPPKIKAIDK
                     IMQAGRVRGKGKTAPTSIQGVKQIIKALRSGEATIVLPDHVPSPQEGGEGVWVDFFGK
                     PAYTMTLAAKLAHVKGVKTLFFCCERLPGGQGFDLHIRPVQGELNGDKAHDAAVFNRN
                     AEYWIRRFPTQYLFMYNRYKMP"
     gene            complement(2506..3570)
                     /gene="tsaD"
                     /locus_tag="WHR07_000679"
     CDS             complement(2506..3570)
                     /gene="tsaD"
                     /locus_tag="WHR07_000679"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEZ2129925.1"
                     /translation="MLVLGIESSCDETGVALYDTERGLRAHCLHTQMAMHAEYGGVVP
                     ELASRDHIRRLVPLTEGCLAQAGASYGDIDAVAFTQGPGLGGALLAGSSYANALAFAL
                     DKPVIPVHHLEGHLLSPLLAEEKPDFPFVALLVSGGHTQIMAVRGIGDYALLGESVDD
                     AAGEAFDKTAKLLGLPYPGGAKLSELAESGRPEAFVFPRPMIHSDDLQMSFSGLKTAV
                     LTAVEKVRAENGADDIPEQTRNDICRAFQDAVVDVLAAKVKKALLQTGFRTVVVAGGV
                     GANRKLRETFGNMTVQIPTPKGKPKHPSEKVSVFFPPTAYCTDNGAMIAFAGAMHLKT
                     GREAGAFNVRPRWPLSEIVK"
     gene            complement(3686..4873)
                     /gene="ccsB"
                     /locus_tag="WHR07_000680"
     CDS             complement(3686..4873)
                     /gene="ccsB"
                     /locus_tag="WHR07_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcsB"
                     /protein_id="HEZ2129926.1"
                     /translation="MTEHYKTLPEHELLIQKSLISNLNLWDWVFAVLVFAATVFVQTR
                     SGMHMDIYETVMLWASAGIAVFLGWFFKPMRWFVPLSVLLAYAAVGLYGGNIKSAEIF
                     LLRYFLSSQSAIMWQCAFVFFALFAYISGAVLASVKNVPTNTLLGMGTVFAWVSAVAG
                     FTGLLVRWHESYLLRPDAGHIPVSNLYEVFILFLVITALMYLYYEGKFAIQKLGGFVF
                     GFMAVVVGFVLWYSVSREAHTIQPLIPALQSWWMKIHVPANFIGYGAFCISAMLGIAE
                     LVSLRAEEKGGKSWLPQSVLIEEVMYKAIAVGFLFFTIATILGALWAADAWGRYWSWD
                     PKETWAFIVWLNYAVWLHLRLVAGWRGKVLAWWAIIGLFVTAFAFIGVNMFLSGLHSY
                     GTL"
     gene            complement(4866..6818)
                     /locus_tag="WHR07_000681"
     CDS             complement(4866..6818)
                     /locus_tag="WHR07_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein"
                     /protein_id="HEZ2129927.1"
                     /translation="MRFAVALLSLLGIASVIGTVLQQNQPQTDYLVKFGPFWAQIFGF
                     LGLYDVYASAWFVVIMMFLVVSTSLCLIRNVPPFWREMKSFREKVKEKSLAAMRHSSL
                     LDVKIAPEVAKRYLEVQGFQGKTVSREGGSVLIAAKKGTMNKWGYIFAHVALIVICLG
                     GLIDSNLLLKLGMLTGRIVPDNQAVYAKDFKPESILSASNLSFRGNVNISEGQSADVV
                     FLNADNGILVQDLPFEVKLKKFHIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNH
                     PLTLHGITIYQASFADGGSDLTFKAWNLGDASREPVVLKATSIHQFPLEIGKHKYRLE
                     FDQFTSMNVEDMSEGAEREKSLKSTLNDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAV
                     EYKNYMLPVLQEQDYFWITGTRSGLQQQYRWLRIPLDKQLKADTFMALREFLKDGEGR
                     KRLVADATKDAPAEIREQFMLAAENTLNIFAQKGYLGLDEFITSNIPKEQQDKMQGYF
                     YEMLYGVMNAALDETIRRYGLPEWQQDEARNRFLLHSMDAYTGLTEYPAPMLLQLDGF
                     SEVRSSGLQMTRSPGALLVYLGSVLLVLGTVLMFYVREKRAWVLFSDGKIRFAMSSAR
                     SERDLQKEFPKHVESLQRLGKDLNHD"
     gene            complement(7095..7718)
                     /locus_tag="WHR07_000682"
     CDS             complement(7095..7718)
                     /locus_tag="WHR07_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c4"
                     /protein_id="HEZ2129928.1"
                     /translation="MKRLTLLAFVLAAGAVSASPKADVEKGKQVAATVCAACHAADGN
                     SGIAMYPRLAAQHTAYIYHQTIGIRDGKRTHGSAAVMKPVVMNLSDQDILNVSAFYAK
                     QQPKSGEANPKENPELGAKIYRGGLSDKKVPACMSCHGPSGAGMPGGGSEIQAYPRLG
                     GQHQAYIVEQMNAYKSGQRKNTIMEDIANRMSEEDLKAVANFIQGLR"
     gene            7924..8553
                     /locus_tag="WHR07_000683"
     CDS             7924..8553
                     /locus_tag="WHR07_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HEZ2129929.1"
                     /translation="MNLFQNAKFFTTVNHLKDLPDTPLEIAFVGRSNAGKSSAINTLT
                     NHVRLAYVSKTPGRTQHINFFELQNGNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQ
                     RKQLIGLVLIMDARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVK
                     KLLKPYSDRQNISVQLFSSLKKQGIDEANRTVGSWFDAADAAASSPKEN"
     gene            complement(8674..11070)
                     /locus_tag="WHR07_000684"
     CDS             complement(8674..11070)
                     /locus_tag="WHR07_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HEZ2129930.1"
                     /translation="MIKKILTTCFGLVFGFCVFGVGLVAIAILVTYPKLPSLDSLQHY
                     QPKMPLTIYSADGEVIGMYGEQRREFTKIGDFPEVLRNAVIAAEDKRFYRHWGVDVWG
                     VARAAVGNVVSGSVQSGASTITQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDK
                     ILELYFNQIYLGQRAYGFASAAQIYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPE
                     RAKLRQKYILNNMLEEKMITVQQRDQALNEELHYERFVQKIDQSALYVAEMVRQELYE
                     KYGEDAYTQGFKVYTTVRADHQKVATEALRKALRNFDRGSSYRGAENYIDLSKSEDVE
                     ETVSQYLSGLYTVDKMVPAVVLDVTKKKNVVIQLPGGRRVTLDRRALGFAARAVNNEK
                     MGEDRIRRGAVIRVKNNGGRWAVVQEPLLQGALVSLDAKTGAVRALVGGYDFHSKTFN
                     RAVQAMRQPGSTFKPFVYSAALSKGMTASTVVNDAPISLPGKGPNGSVWTPKNSDGRY
                     SGYITLRQALTASKNMVSIRILMSIGVGYAQQYIRRFGFRSSELPASLSMALGTGETT
                     PLKVAEAYSVFANGGYRVSSHVIDKIYDRDGRLRAQMQPLEAGQNAPQAIDPRNAYIM
                     YKIMQDVVRVGTARGAAALGRTDIAGKTGTTNDNKDAWFVGFNPDVVTAVYIGFDKPK
                     SMGRVGYGGTIAVPVWVDYMRFALKGKQGKGMKMPEGVVSSNGEYYMKERMVTDPGLT
                     LDNSGIAPQPSRRAKEDDGGAAEGGRQAADDEVRQDMQETPVLPSNTGSKQQQLDSLF
                     "
     gene            11222..12337
                     /locus_tag="WHR07_000685"
     CDS             11222..12337
                     /locus_tag="WHR07_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilM"
                     /protein_id="HEZ2129931.1"
                     /translation="MRLFKSLKNPKKTDAKLPKKSSGLNNRAAIGIDIDQHSIKMVQL
                     SGRSLNQIQLEKYVIAKLPKNIIQGNKVQNYDQLVTYLQQAYAKLGTSCKNIIASVPQ
                     NLATIEQLTYTDKDAELDLQGFVESSISEVSSISLEEANYDYQVLSQSAAGEAVLAVA
                     SRKDEIEPLIDAFNAAGMKLSALDVDIFGQYNAYALWINHFAPELAAEKVAIFGVYAA
                     QTYALVIQDGKILYKQETSVSEEQLNQLIQRTYQVTEEKAEEIINSPQKPSDYQESVA
                     NYFNQQITQEIQRVLQFYYTTQTADDMTDIKHILLTGEAARQEGITQTVASQTNADVQ
                     CVHPARYFADNLKTDKQQFELDAPTLTRAFGLAVRGL"
     gene            12340..12939
                     /locus_tag="WHR07_000686"
     CDS             12340..12939
                     /locus_tag="WHR07_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HEZ2129932.1"
                     /translation="MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYL
                     FIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQEKDAFLIKKNKIEELQLKRLQAA
                     KILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
                     SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN"
     gene            12940..13587
                     /locus_tag="WHR07_000687"
     CDS             12940..13587
                     /locus_tag="WHR07_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HEZ2129933.1"
                     /translation="MASKSSKTNLDLNNLHLLNLPARLFIALLAVAAVLGLGYAGLFK
                     SQMESLEEYEAKETELKNTYKQKSIDAASLNNLRDELASIRSAFDIMLKQLPTDAEIP
                     NLVQELHQAGSSNGLRLDSVMPQPPVDDGPIKRLPYSISITGNYEQISQFTRDVGSLS
                     RIITLESLKIAQSPENGGNPDGKSSILNLSAIATTYQAKSVEELAAEAAQNAEQK"
     gene            13605..14150
                     /locus_tag="WHR07_000688"
     CDS             13605..14150
                     /locus_tag="WHR07_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilP"
                     /protein_id="HEZ2129934.1"
                     /translation="MKHYALLISFLALSACSQGSEDLNEWMAQTRREAKAEIIPFQAP
                     TLPVAPVYSPPQLTGPNAFDFRRMETDKKGENAPDTKRIKETLEKFSLENMRYVGILK
                     SGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDNSIVLNELIEDSTGNWVSRKAE
                     LLLNSSDKNTEQAAAPAAEQN"
     gene            14169..16454
                     /locus_tag="WHR07_000689"
     CDS             14169..16454
                     /locus_tag="WHR07_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HEZ2129935.1"
                     /translation="MNTKLTKIISGLFVATAAFQTASAGNITDIKVSSLPNKQKIVKV
                     SFDKEIVNPTGFVTSSPARIALDFEQTGISMDQQVLEYADPLLSKISAAQNSSRARLV
                     LNLNKPGQYNTEVRGNKVWIFINESDDTVSAPARPAVKAAPAAPAKQQAAAPSTKSAV
                     SVSKPFTPAKQQAAAPFTESVVSVSAPFSPAKQQAAASAKQQTAAPAKQQAAAPAKQT
                     NIDFRKDGKNAGIIELAALGFAGQPDISQQHDHIIVTLKNHTLPTTLQRSLDVADFKT
                     PVQKVTLKRLNNDTQLIITTAGNWELVNKSAAPGYFTFQVLPKKQNLESGGVNNAPKT
                     FTGRKISLDFQDVEIRTILQILAKESGMNIVASDSVNGKMTLSLKDVPWDQALDLVMQ
                     ARNLDMRQQGNIVNIAPRDELLAKDKAFLQAEKDIADLGALYSQNFQLKYKNVEEFRS
                     ILRLDNADTTGNRNTLVSGRGSVLIDPATNTLIVTDTRSVIEKFRKLIDELDVPAQQV
                     MIEARIVEAADGFSRDLGVKFGATGKKKLKNDTSAFGWGVNSGFGGDDKWGAETKINL
                     PITAAANSISLVRAISSGALNLELSASESLSKTKTLANPRVLTQNRKEAKIESGYEIP
                     FTVTSIANGGSSTNTELKKAVLGLTVTPNITPDGQIIMTVKINKDSPAQCASGNQTIL
                     CISTKNLNTQAMVENGGTLIVGGIYEEDNGNTLTKVPLLGDIPVIGNLFKTRGKKTDR
                     RELLIFITPRIMGTAGNSLRY"
BASE COUNT         4502 a         4733 c         3784 g         3618 t
ORIGIN      
        1 aaaatgccgt ctgaactgtt cagacggcat ttttgatttt caaaccggaa ttacagcccc
       61 gctgccgccc tcaatgcagc agctttgtcg gtgcgctccc aagtgaactc aggttcttcg
      121 cggccgaaat gtccgtaagc ggcggattta ctgtaaatcg ggcgcaagag atcgagcatt
      181 tggacgatgc ctttggggcg caggtcgaaa tgttcgcgaa ctaaggtaat cagtttttcc
      241 tcgctgattt tgcctgtgcc gaaagtgtcg atggaaatcg aagtcggttc ggcaacgccg
      301 atggcgtagg aaacttggat ttggcattgg gttgccaaac cggcggcgac gatgtttttc
      361 gcaacgtagc ggcaggcgta agcggcggaa cgatccactt tggacgggtc tttgccggag
      421 aacgcgccgc cgccgtgcgg agccgcgccg ccgtaggtat caacgatgat tttacggccg
      481 gtcaaaccgc agtcgccttg cgggccgccg atgacgaagc ggccggtcgg gttgatcagg
      541 tatttggttt cgtcggtcag cagttcagac ggcaggacgg gcttgataat ctgctcaatg
      601 acggcgtttt tcaactcttc ataaccgatt tccgggtcgt gttgcgtaga gaggacgacg
      661 gtatcaatgc gttttacttt gccggattcg ctatcgtaaa ccacggtcag ttgggctttt
      721 gcgtcgggac gcagccaagg caggaggccg tctttgcgta attcgctttg acgctgcatc
      781 aggcggtggc tgtaatagat ggcaaacggc atcagggtcg gggtttcgtc gcaggcatag
      841 ccgaacatca aaccttggtc gccagcgcct tggttcaagt caatgccttc gccttcgttc
      901 acgccttggg cgatgtccgg agattgctgg tcgtagtaca cgccgaccgc gcagccgttg
      961 gcatcaaagc ccagctcgga ggagttgtag ccgatgcgtt tgatggtttc gcgtgcgact
     1021 ttgatgtagt ccacttgggc ggtggtggtg atttcgcctg ccaatacgca caagcctgtg
     1081 ttgaccaaag tttctgcggc gacacgcgct ttggggtctt gcgccaagat ggcatccaaa
     1141 atcgcgtcgg atacttggtc ggcaactttg tccggatggc cttcggatac cgattcggaa
     1201 gtaaacagat attcgctcat tgagattttc cttgaaaaac aaaccatctt cttcagacgg
     1261 catgttgtat gaacataatg tcgacagcgg gaaatatagc aaaatttccc tattcatacc
     1321 attcagttga gaaatattcc catttgaatg gcactttgga atctctgccc gtacgtttct
     1381 tacaggcaaa aaaattcccg catcaagcgg gtttggattg ctctggtgag ccacatcggc
     1441 ttttcaaccg tccaccttac ttttcctttt gaaaagcagg ttggcatgga attcccaact
     1501 cttaatgcag cgcggatggt agcagaaaag cctttccgcc gcaatacttc cctttttcag
     1561 acggcatgtt tcgtttacaa ttcgggctgt ttcccccttt gcgaaccgcc atgcacatcc
     1621 tgttgaccgc cctgctcaaa tgcctctccc tgctgccact ttcctgtctg cacacgctgg
     1681 gaaaccggct cggacatctg gcgttttacc ttttaaagga agaccgcgcg cgcatcgtcg
     1741 ccaatatgcg tcaggcaggc atgaatcccg accccaaaac agtcaaagcc gtttttgcgg
     1801 aaacggcaaa aggcggtttg gaacttgccc ccgcgttttt cagaaaaccg gaagacatag
     1861 aaacaatgtt caaagcggta cacggctggg aacatgtgca gcaggctttg gacaaacacg
     1921 aagggctgct attcatcacg ccgcacatcg gcagctacga tttgggcgga cgctacatca
     1981 gccagcagct tccgttcccg ctgaccgcca tgtacaaacc gccgaaaatc aaagcgatag
     2041 acaaaatcat gcaggcgggc agggttcgcg gcaaaggaaa aaccgcgcct accagcatac
     2101 aaggggtcaa acaaatcatc aaagccctgc gttcgggcga agcaaccatc gtcctgcccg
     2161 accacgtccc ctcccctcaa gaaggcgggg aaggcgtatg ggtggatttc ttcggcaaac
     2221 ctgcctatac catgacgctg gcggcaaaat tggcacacgt caaaggcgtg aaaaccctgt
     2281 ttttctgctg cgaacgcctg cctggcggac aaggtttcga tttgcacatc cgccccgtcc
     2341 aaggggaatt gaacggcgac aaagcccacg atgccgccgt gttcaaccgc aatgccgaat
     2401 attggatacg ccgttttccg acgcagtatc tgtttatgta caaccgctac aaaatgccgt
     2461 aacgaaaata aaaatgccgt ctgaacaatt tcagacggca ttttgtcatt tgacgatttc
     2521 cgacagcggc cagcgcgggc gtacattaaa tgcaccggct tccctacccg ttttcaaatg
     2581 catcgcgcct gcaaaggcaa tcatggcacc gttgtccgtg cagtatgccg tcggcgggaa
     2641 aaacacgctg actttttcgg acggatgttt cggcttgcct ttgggggtcg ggatttgcac
     2701 cgtcatgttg ccgaaagttt cacggagttt gcggtttgca ccgaccccgc cggcgaccac
     2761 tacggttctg aaccctgtct gcaacagggc ttttttcact ttcgccgcca acacatcgac
     2821 taccgcatct tgaaacgcac ggcagatgtc gttgcgtgtc tgctcaggaa tgtcatccgc
     2881 cccgttttcc gcgcgcactt tctcgacggc agtcaaaaca gcggttttca aacctgaaaa
     2941 actcatctgc aaatcgtcgg aatgaatcat cgggcgcgga aaaacaaacg cttcgggcct
     3001 gcccgattcc gcaagttccg acagtttcgc accgcccgga tacggcaagc ccagcagttt
     3061 cgccgttttg tcgaatgcct cgcccgccgc atcatcgacg ctctcgccca aaagcgcgta
     3121 gtcgcctatg cccctgaccg ccataatctg cgtatgcccg cccgaaacca acagcgcgac
     3181 aaaaggaaag tcgggttttt cctccgccaa cagcggcgac agcagatgcc cttccaaatg
     3241 atggacggga ataacaggct tatccagcgc aaaagccaag gcattggcgt aactcgaacc
     3301 cgccagcaac gcgccgccca aaccgggccc ctgcgtaaag gcaaccgcgt caatgtcgcc
     3361 atacgatgcg cctgcctgcg ccagacagcc ttccgtcaac ggaacaaggc ggcggatatg
     3421 gtcgcggctt gccagctccg gcacaacccc gccgtattcg gcgtgcattg ccatctgcgt
     3481 gtgcagacag tgcgcccgca atcctcgttc ggtgtcatac agcgcaacgc ctgtttcgtc
     3541 gcaagaagat tcgattccca ataccaacat ggtctgatgc cgttaaaaac tgaaaaacgt
     3601 attctagcgg atttcggcac gactgccgta tcccaaaaac ggaacatgcc gtctgaagcc
     3661 cttcagacgg catcgtcgca ccgtatcaaa gcgttccgta agaatgcagc ccgctcaaaa
     3721 acatattcac gccgataaag gcaaatgcgg ttacgaacaa accgataatc gcccaccacg
     3781 ccagcacttt gccgcgccaa ccggcaacca gccgcaagtg cagccaaacg gcgtaattga
     3841 gccagacgat gaacgcccac gtctctttcg ggtcccaact ccaatagcgt ccccaagcat
     3901 ccgccgccca cagcgcaccc aaaatggtgg caatggtaaa gaacagaaag ccgacggcaa
     3961 tcgccttata cataacttcc tcaatcaaca cggattgcgg cagccacgat ttcccgcctt
     4021 tttcttccgc acgcagggaa accagttcgg caataccgag catcgcggaa atgcaaaacg
     4081 cgccgtaacc gataaagttt gccggaacgt ggattttcat ccaccaagat tgcaatgccg
     4141 gaatcagcgg ctggatggta tgcgcctcgc gggacacgct gtaccacaag acaaatccaa
     4201 ccacgaccgc cataaagccg aacacgaagc cgcccaattt ctgtatggcg aacttacctt
     4261 cataataaag atacatcagc gcggtaatca ccaaaaacag gatgaacact tcatacaggt
     4321 tggaaaccgg aatatgcccc gcatcgggac ggagcagata gctttcgtgc caacgtacca
     4381 gcagaccggt aaagcctgct acggcagaca cccatgcaaa cacggttccc atacccaaca
     4441 gcgtgttggt cggcacattt tttacgcttg ccaaaaccgc gcccgaaata taggcgaaca
     4501 gggcgaagaa gacaaaggcg cactgccaca taatcgccga ctggctgctg aggaaatacc
     4561 gcaacaggaa aatctctgcc gatttgatgt tgccgccata caaaccgacg gcggcatagg
     4621 caagcaatac gcttaaagga acaaaccagc gcatcggttt gaaaaaccaa cccaaaaaca
     4681 cggcaatacc ggcacttgcc cacaacatga ccgtttcgta aatgtccata tgcataccgg
     4741 aacgggtctg tacgaaaacc gtagccgcaa aaaccagcac ggcaaatacc caatcccaaa
     4801 gattcagatt gctgatcaaa gacttctgaa tcagcagctc gtgttccgga agggttttat
     4861 agtgttcagt catgattcaa gtccttgccg agccgttgca gactctcgac gtgttttgga
     4921 aattccttct gcaaatcccg ttcgctgcgg gccgaagaca tggcaaaacg gattttgccg
     4981 tctgaaaaca atacccacgc ccgtttttcg cgcacataaa acatcaatac cgtacccaat
     5041 accaacagca ccgagccgag atagaccaaa agcgcacccg gggaacgggt catctgcaaa
     5101 cccgacgaac gcacctcgga aaacccatca agttgcagca gcataggcgc gggatattcg
     5161 gtcaaacccg tgtacgcatc catactgtgc agcaggaaac ggttccgcgc ttcatcctgc
     5221 tgccattcgg gcaagccgta ccggcgtatg gtttcatcca aagcagcgtt catcacgccg
     5281 taaagcattt cgtagaaata accctgcatc ttatcctgct gctctttcgg gatattggac
     5341 gtaataaatt cgtccaatcc caaatagcct ttttgtgcaa agatgttcag cgtgttttcc
     5401 gcagccagca tgaattgttc gcggatttcg gcaggtgcgt ctttggttgc gtcggcaacc
     5461 agacgtttgc gcccttcccc atctttcaaa aactcacgca atgccataaa ggtgtccgct
     5521 ttcaactgct tgtccaaggg gatacgcagc cagcggtatt gctgctgcaa gccgctgcgc
     5581 gtgccggtaa tccaaaaata atcctgttcc tgcaaaaccg gcagcatata gtttttatat
     5641 tcgaccgcct gccctgccgc atcacggata cggtaaacaa tggaagggcc gatattggtg
     5701 tattttttac cttcctgagt aacggcgcgg acatcgttca gcgtggattt caggcttttt
     5761 tcccgttccg cgccctcgct catgtcctcc acattcatag aagtgaactg atcgaactca
     5821 agacgatatt tgtgtttgcc aatttccaac ggaaactggt gtatggatgt tgccttcaac
     5881 acgacaggct cgcgcgaagc atcacccaaa ttccacgcct tgaatgtcaa atccgaaccg
     5941 ccgtcggcaa aactcgcctg ataaatcgtg atgccgtgca aggtcaaagg atggttcacg
     6001 cggatggtgc gctcgagttt ctcaccggtt gccttgtccg tcacttcaat atcgctggcg
     6061 aaatcacgcg gcatacccgt attgtaaaaa tcgatatgga attttttcag tttgacttca
     6121 aaaggcaagt cctgaaccaa tatcccgttg tcggcattca ggaaaaccac atccgcactc
     6181 tgcccctcgg aaatattgac gttgccccta aatgagagat tggacgcact caaaatactt
     6241 tcgggcttga aatccttggc ataaaccgcc tgattgtccg gaacaatccg accggtcagc
     6301 atacccagtt tcaacagcag gttactgtct atcaacccgc ccaggcaaat gacaatcaaa
     6361 gcaacatggg caaagatata gccccatttg ttcatcgtgc cttttttggc ggcaatcaga
     6421 accgacccgc cctcacggct gacggttttt ccctgaaaac cctgcacctc cagataacgt
     6481 ttggcaactt cgggggcaat ttttacatcc aacagcgaag aatggcgcat cgccgccaga
     6541 gatttttctt taaccttttc ccgaaaagac ttcatttcgc gccagaacgg cggcacattg
     6601 cgaatcaggc acaaactggt agaaaccacc aaaaacatca tgataacgac aaaccatgcc
     6661 gaagcataga cgtcatacag tcccagaaaa ccaaaaatct gcgcccaaaa aggtccgaat
     6721 ttgaccaaat aatccgtctg cggctggttt tgctgcaaca ccgtaccgat aaccgatgca
     6781 atacccagca gactgagcaa agcgaccgca aagcgcatgg agctgaaaaa agcgaaccac
     6841 ggacgggaaa gaagtggggg agatctacgg gatttactca ttgtgtgttt attccgccat
     6901 caggaatatg ggaaagcaga attgggcaaa cagaaaacaa cgtcccgatt ctactgtctt
     6961 gatgcttttt atttcaagac aatgaagaca gcctgcatcg attccaacgg ttgcgattga
     7021 aaaaacttat cgcagaattg cctgaagccg tctgaaaact tttcagacgg cctctaaaac
     7081 agactattgc ggaattaacg caaaccttgg ataaagttgg cgaccgcttt caaatcttct
     7141 tcagacatac ggtttgcaat atcttccatg atggtatttt tacgctgacc ggacttgtag
     7201 gcattcatct gttcaacaat atatgcctga tgctgaccgc ccaaacgcgg ataagcctga
     7261 atttcgcttc cgcctcccgg catacccgca ccgctcggac cgtggcagga catacacgcc
     7321 ggcacttttt tatcgctcaa accgccgcga tagattttcg cacccaattc gggattttcc
     7381 ttaggattgg cttcaccgga tttgggctgc tgtttggcat agaatgcgga tacgttcaaa
     7441 atatcctgat cgctcaaatt cattaccacc ggtttcatca cagctgccga accgtgggtg
     7501 cgtttaccgt cgcggatgcc gatagtttga tgatagatgt aagcagtatg ctgtgccgcc
     7561 aaacgcggat acatcgcaat gccgctgtta ccgtctgctg catggcaagc cgcacaaacc
     7621 gttgcggcaa cctgtttgcc tttttccacg tctgctttgg gagaggcgga aaccgcaccg
     7681 gcagccaaaa caaaggccaa taaagtcaat cgtttcatgg agtgctcctg attacagcat
     7741 tggataacgc aacaatgctc tttttatatt caaatacggg atttttgacc cgattaaaac
     7801 cgatgattct gtaaacgtgt tattctatac taaatttaca ttaaattacc actgtgtttc
     7861 acataaaacc aaccgcatat ttttgctgtc ggacaaacgg cggcggaaaa caaggatatg
     7921 cccatgaacc tttttcaaaa cgccaaattc ttcacgacgg tcaaccacct taaagacctg
     7981 cccgacaccc ctctcgaaat tgcctttgtc ggcaggagca atgccggaaa atccagtgcc
     8041 atcaataccc tgaccaacca tgtccgtctt gcctacgttt caaaaacacc cggacggacg
     8101 cagcatatca acttcttcga gctgcagaac ggcaatttta tggtcgattt gcccggctac
     8161 ggttatgccc aagtccccga agcagtacgc gcacattggg tcaatctgct cggcgactat
     8221 ctgcaacagc gcaaacagct tatcgggctg gttttgatta tggatgcccg ccatccttta
     8281 aaagaactcg acatccgtat gctggacttt ttccacacga ccggcagacc ggttcacatc
     8341 ctgctgtcaa aagccgacaa attatccaaa aacgaacaga taaaaaccct gtcccaagtc
     8401 aaaaaactgc tcaaacctta ttccgacagg caaaacatca gcgtacagct gttttccagc
     8461 ctgaaaaaac aaggtattga cgaggccaac cgaactgtcg gaagctggtt tgacgcagca
     8521 gatgccgccg cttcctctcc aaaggaaaac tgaccccaat tatacggaaa ccgtatttcc
     8581 cccacttgac cgaccgcaaa catttaaaaa attgccactg ccaaatctaa aatgccgtct
     8641 gaaagacttt tcagacggca ttttgcggag tctttaaaac agagaatcca actgctgctg
     8701 tttggaacca gtattactcg gaagcaccgg cgtttcctgc atatcttggc ggacttcgtc
     8761 atccgccgcc tgccgtccgc cttctgccgc gcccccgtca tcttcttttg cccgtcggga
     8821 aggttgcggc gcaataccgc tgttgtccag cgtcaagccc ggatcggtta ccatacgttc
     8881 cttcatatag tattcgccat tgctgctgac cacaccttca ggcattttca tccccttgcc
     8941 ctgctttcct ttcaacgcaa aacgcatata gtccacccaa accggcaccg caatcgtacc
     9001 gccgtagccg acacgcccca tactcttagg tttgtcgaag ccgatatata cggcagtaac
     9061 cacatcgggg ttaaaaccga caaaccacgc atccttattg tcattggtcg tacccgtttt
     9121 accggcaata tccgttcttc ccaacgcagc tgcccccctt gccgtaccga cacggaccac
     9181 atcctgcata atcttataca taatataggc attgcgcgga tcgattgcct gaggcgcatt
     9241 ttgcccggcc tccaaaggtt gcatttgggc gcgcaacctg ccgtctctgt cataaatctt
     9301 atcgattacg tgcgaagaaa ccctatatcc gccgttcgca aatacgctat atgcctccgc
     9361 cactttcaac ggcgttgtct cgcccgtacc taaagccata gacaggcttg ccggcagctc
     9421 ggacgacctg aagccgaaac gccggatata ctgttgcgcg taaccgacac cgatagacat
     9481 caaaatacgg atggaaacca tattcttgga agccgtcaga gcctgtctca aagtaatgta
     9541 gccggaatat ctgccgtctg aatttttagg tgtccaaacc gaaccgttcg gccctttccc
     9601 cggcagggaa atcggcgcat cgttaaccac tgtggacgcg gtcatcccct tagataatgc
     9661 cgccgaatag acaaacggct taaaggtcga acccggctgc cgcattgcct gaacggcacg
     9721 attgaatgtt ttgctgtgaa aatcataacc gccgaccagc gcgcgcacag ctccggtttt
     9781 tgcatccagc gaaaccaaag ccccctgcag caacggctct tgaaccaccg cccaacgccc
     9841 gccgttgttt ttgacacgga tgaccgcgcc cctgcggata cggtcctccc ccattttttc
     9901 attattgacc gcgcgggccg caaaacccaa ggcgcgcctg tcaagcgtaa cccgcctgcc
     9961 gccgggcagc tgtatgacga catttttctt tttagtcaca tccaacacaa cggcgggaac
    10021 cattttatcg acggtataga gtcccgacag atactggctg acagtctcct cgacatcttc
    10081 actcttactc aaatcgatat agttttccgc accgcggtag ctgctgccgc gatcgaaatt
    10141 ccgtagagcc ttgcgcaatg cctcggttgc caccttctga tgatcagcgc ggaccgtggt
    10201 ataaacctta aaaccctgcg tataggcatc ttcaccgtat ttctcataca gttcctgacg
    10261 caccatttcc gccacatata aagcactctg atcgattttc tgaacaaacc gctcgtaatg
    10321 cagttcctca ttcaacgcct gatcgcgctg ttgcacggta atcatcttct cctcgagcat
    10381 attgttcaaa atatacttct ggcgcaactt ggcacgttcc ggattaacaa tcggattata
    10441 ggcagacgga gccttgggca gtcccgcaag catggcggct tccgccaaag tcaaatctcg
    10501 gacattctta ttgaaataga tttgcgcggc agatgcaaaa ccataggcgc gctgaccgag
    10561 gtaaatctga ttgaaataca actcgaggat tttgtctttg cttaaagact gctcgatttt
    10621 ataggcaagc aacacctcat tgaatttgcg tgtgaacgtt ttttcactgc tcaaataaaa
    10681 atttttcgcc acctgctgcg taatcgtact cgcacccgac tgcacgctgc cggacacgac
    10741 attgccgacg gcagcgcggg caacacccca aacatccacc ccccaatgcc ggtaaaagcg
    10801 tttatcctcg gcggcgataa ccgcattccg caacacctct gggaaatcgc cgatttttgt
    10861 aaattcgcgc cgctgctccc catacatacc gatgacttcc ccatccgccg aataaatagt
    10921 caacggcatt ttaggctggt aatgctgcaa agaatccaaa gacggcagtt tcggatacgt
    10981 taccaaaata gcaatggcaa ccaaacccac tccaaataca caaaacccaa aaaccaaacc
    11041 aaaacaagtc gttaaaatct ttttaatcat agctgaataa taatttacca ttattggtat
    11101 taaataaagt aaaatagcaa ccgatttcta caaagcacgg tttcaatgtg caaagaacaa
    11161 ggaatccatt acggataccg aaacggttac tcactgtaca aataaagcag gaactttcat
    11221 catgcgcttg tttaaaagct tgaaaaaccc taaaaaaaca gatgccaagc tccctaaaaa
    11281 atcttcggga ctcaataacc gcgcggcaat cggcatcgat atcgaccagc attccatcaa
    11341 aatggtccaa ttgtcaggac gtagtttaaa ccaaattcaa ttggaaaaat acgtcattgc
    11401 caaattacca aagaatatca ttcaaggcaa taaagtccaa aattacgatc aacttgttac
    11461 atatttgcaa caagcctatg ccaaactggg tacgtcgtgc aaaaacatca tcgcgtccgt
    11521 cccgcaaaat ctggcaacca tcgaacaatt gacctacaca gacaaagatg cagaattaga
    11581 cctgcagggg ttcgtggagt cctccatctc cgaagtcagc tcgatatcgc tcgaagaagc
    11641 caattacgac tatcaggtct tgtcccaatc ggccgccggc gaagctgtgt tggccgtcgc
    11701 atcgagaaag gatgaaatcg aacccctgat tgacgcattc aacgccgccg gtatgaaatt
    11761 atccgcgctt gatgtggaca ttttcggaca atacaacgcc tacgcgctat ggataaacca
    11821 tttcgccccc gagcttgcag ccgaaaaagt cgccattttc ggcgtatatg ccgcacagac
    11881 ctacgccttg gtcatccaag acggaaaaat cctatacaaa caggaaacct ccgtcagcga
    11941 agaacagctc aaccaactca tccagcgcac ctatcaggta acagaagaaa aagcggaaga
    12001 aatcatcaac tccccgcaaa aaccttccga ttaccaagaa agcgtggcaa actatttcaa
    12061 ccagcagatt acccaagaaa tacaaagggt cttgcagttt tattacacca cgcagaccgc
    12121 agacgatatg accgacatca agcatatcct gctgaccggg gaagcggcgc gccaggaagg
    12181 catcacccaa accgtcgcct cacaaaccaa tgcagatgta caatgcgtcc atcccgcgcg
    12241 ttattttgcg gacaacctca aaacagacaa acaacaattc gaacttgatg cgccgacact
    12301 gaccagggcg ttcggtttgg cggtacgggg attataatta tgaacaattt aatcaaaatc
    12361 aacctcctcc cctacaggga agagatgaac aagcgcaaac agcagcagtt taaaacgctg
    12421 atgtacggtg ccgtgctgac gggcgttgcc gccgttgcgg caacctacct gtttatcgac
    12481 aatatgatca ataaccagtc ggaaagaaac acgctgctgg aaacctccat cgcacacttg
    12541 gataccgagc tgtcggaaat acaaaagctc aaacaggaaa aagatgcctt cctgattaag
    12601 aaaaacaaaa tcgaggagct ccagctcaaa cgcctccaag ccgcaaaaat cctcgacagc
    12661 ctgaatgagg ccgtccccgg aagcacctac ctgacctcgc tggatgccgt taccgccgac
    12721 tcttatcggc tcagcggcag gacatccagc gacaaccgcg ttgccgccat gatgagggcg
    12781 atgcccaata ccggcatatt caagcaaccc gaattgttaa gcatcaagaa aaacaattcg
    12841 catcaagaat ttacccttca ggcaacatta caacccatcg taaaggcggc cgaatccaaa
    12901 gagaatccgg cttcgggaaa cgcacaggag gcaaactgaa tggcttctaa atcatctaaa
    12961 accaacttgg atctcaacaa ccttcacctg ctcaaccttc ctgccaggct ttttatcgcc
    13021 ctgctggccg ttgccgccgt gctggggctc ggttatgccg gattgttcaa aagccagatg
    13081 gaatcccttg aggaatacga agcaaaagaa accgaactga aaaacaccta caaacagaaa
    13141 agtatcgacg ctgccagcct gaacaacctg agggacgaac ttgcctcaat ccgctctgcc
    13201 ttcgatatca tgttgaaaca gctgccgaca gatgcagaaa ttcccaatct ggttcaagag
    13261 cttcatcagg caggttcgag caacggcctg cgcttggaca gcgttatgcc ccaacctccc
    13321 gtagatgacg gccccatcaa aagattaccc tattccattt ccattaccgg aaattacgaa
    13381 cagatcagcc aatttacccg cgatgtcggc agcctctccc gaatcattac ccttgagtcg
    13441 ctgaaaatcg cccaatctcc ggaaaacggc ggcaatcctg acggcaagag cagcatcctg
    13501 aacctcagcg ccattgccac cacctaccaa gcaaaatccg tagaagagct tgccgcagaa
    13561 gcggcacaaa atgccgagca aaaataactt acgttaggga aaccatgaaa cactatgcct
    13621 tactcatcag ctttttggct ctctccgcgt gttcccaagg ttctgaggac ctaaacgaat
    13681 ggatggcaca aacgcgacgc gaagccaaag cagaaatcat acctttccaa gcacctaccc
    13741 tgccggttgc gccggtatac agcccgccgc agcttacagg gccgaacgca ttcgacttcc
    13801 gccgcatgga aaccgacaaa aaaggggaaa atgcccccga caccaagcgt attaaagaaa
    13861 cgctggaaaa attcagtttg gaaaatatgc gttatgtcgg cattttgaag tctggacaga
    13921 aagtctccgg cttcatcgag gctgaaggtt atgtctacac tgtcggtgtc ggcaactatt
    13981 tgggacaaaa ctacggtaga atcgaaagca ttaccgacaa cagcatcgtc ctgaacgagc
    14041 taatagaaga cagcacgggc aactgggttt cccgtaaagc agaactgctg ttgaattctt
    14101 ccgacaaaaa caccgaacaa gcggcagcac ctgccgcaga acaaaattaa gaagaggatt
    14161 actccattat gaataccaaa ctgacaaaaa tcatttccgg tctctttgtc gcaaccgccg
    14221 cctttcagac agcatcggca ggaaacatta cagacatcaa agtttcctcc ctgcccaaca
    14281 aacagaaaat cgtcaaagtc agctttgaca aagagattgt caacccgacc ggcttcgtaa
    14341 cctcctcacc ggcccgcatc gccttggact ttgaacaaac cggcatttcc atggatcaac
    14401 aggtactcga atatgccgat cccctgttga gcaaaatcag tgccgcacaa aacagcagcc
    14461 gtgcacgtct ggttctgaat ctgaacaaac cgggccaata caataccgaa gtacgcggga
    14521 acaaagtttg gatattcatt aacgaatcgg acgataccgt gtccgccccc gcacgccccg
    14581 ccgtaaaagc cgcgcctgcc gcaccggcaa aacaacaggc tgccgcaccg tctaccaagt
    14641 ccgcagtatc cgtatccaaa ccctttaccc cggcaaaaca acaggctgcc gcaccgttta
    14701 ccgagtccgt agtatccgta tccgcaccgt tcagcccggc aaaacaacag gcggcggcat
    14761 cagcaaaaca acagacggca gcaccagcaa aacaacaggc ggcagcacca gcaaaacaaa
    14821 ccaatatcga tttccgcaaa gacggcaaaa atgccggcat tatcgaattg gctgcgttgg
    14881 gctttgccgg gcagcccgac atcagccaac agcacgacca catcatcgtt acgctgaaaa
    14941 accataccct gccgaccacg ctccaacgca gtttggatgt ggcagacttt aaaacaccgg
    15001 ttcaaaaggt tacgctgaaa cgcctcaata acgacaccca gctgattatc acaacagccg
    15061 gcaactggga actcgtcaac aaatccgccg cgcccggata ctttactttc caagtcctgc
    15121 cgaaaaaaca aaacctcgag tcaggcggcg tgaacaatgc gcccaaaacc ttcacaggcc
    15181 ggaaaatctc ccttgacttc caagatgtcg aaatccgcac catcctgcag attttggcaa
    15241 aagaatccgg gatgaacatt gttgccagcg actccgtcaa cggcaaaatg accctctccc
    15301 tcaaagacgt accttgggat caggctttgg atttggttat gcaggcacgc aacctcgata
    15361 tgcgccagca agggaacatc gtcaacatcg cgccccgcga cgagctgctt gccaaagaca
    15421 aagccttctt acaggcggaa aaagacattg ccgatctggg cgcgctgtat tcacaaaact
    15481 tccaattgaa atacaaaaat gtggaagaat tccgcagcat cctgcgtttg gacaatgccg
    15541 acacgaccgg aaaccgcaat acgcttgtca gcggcagggg cagcgtgctg atcgatcccg
    15601 ccaccaatac cctgattgtt accgataccc gcagcgtcat cgaaaaattc cgcaaactga
    15661 ttgacgaatt ggacgtaccc gcgcaacaag tgatgattga ggcgcgtatc gtcgaagcgg
    15721 cagacggctt ctcgcgcgat ttgggcgtta aattcggcgc gacaggcaag aaaaagctga
    15781 aaaatgatac aagcgcattc ggctgggggg taaactccgg cttcggcggc gacgataaat
    15841 ggggggccga aaccaaaatc aacctgccga ttaccgctgc cgcaaacagc atttcgctgg
    15901 tgcgcgcgat ttcctccggt gccttgaatt tggaattgtc cgcatccgaa tcgctttcaa
    15961 aaaccaaaac gcttgccaat ccgcgcgtgc tgacccaaaa ccgcaaagag gccaaaatcg
    16021 aatccggtta cgaaattcct ttcaccgtaa cctcaatcgc gaacggcggc agcagcacga
    16081 acacggaact caaaaaagcc gtcttggggc tgaccgttac gccgaacatc acgcccgacg
    16141 gccaaatcat tatgaccgtc aaaatcaaca aggactcgcc tgcgcaatgt gcctccggta
    16201 atcagacgat cctgtgtatt tcgaccaaaa acctgaatac gcaggctatg gttgaaaacg
    16261 gcggcacatt gattgtcggc ggtatttatg aagaagacaa cggcaatacg ctgaccaaag
    16321 tccccctgtt gggcgacatc cccgttatcg gcaacctctt taaaacacgc gggaaaaaaa
    16381 ccgaccgccg cgaactgctg attttcatta ccccgaggat tatgggtacg gccggcaaca
    16441 gcctgcgcta ttgatgcgtc aaaataaggg catatgtttt acggcatatg ccctttcttt
    16501 atgcttttgc cgcgaccgaa atgccgtcat tcccgcgcag gcgggaatcc agtccgttca
    16561 gtttcggtca tttctgataa attcctgttg cttttcattt ctggattccc acttttgtgg
    16621 gaatgacggc ggaaggg
//
LOCUS       DAWGKF010000030        16630 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.030, whole genome shotgun sequence.
ACCESSION   DAWGKF010000030 DAWGKF010000000
VERSION     DAWGKF010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16630)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16630)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16630
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.030"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(3..227)
                     /locus_tag="WHR07_000690"
     CDS             complement(3..227)
                     /locus_tag="WHR07_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HEZ2129936.1"
                     /translation="MNSETLDVTGLKCPLPILRAKKALAQMQQGDVLTVLATDGGAPG
                     DFEAFCRQTGHVLLDASEQEGVFTLVVKHK"
     gene            336..947
                     /locus_tag="WHR07_000691"
     CDS             336..947
                     /locus_tag="WHR07_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNP1-like family protein"
                     /protein_id="HEZ2129937.1"
                     /translation="MRRTALLLLALTAGTSLAAGFNQKDTPINTRYRETPEEAAAREF
                     KEHTAKLPPLPDTHSDGWFDIYVDENYGKQPKILLDSLQIMPAPDGSIRYILNIRSDK
                     GYDNLTAEGIFCARFSIRFGNGKPSSYKVFGYGDTVNRRWIQPRNAEWKPIGGTLSRN
                     DALRTVLYQAFCEGDVPADTKGLVQRLKERAGRYAPSIKPHNK"
     gene            complement(1007..1879)
                     /locus_tag="WHR07_000692"
     CDS             complement(1007..1879)
                     /locus_tag="WHR07_000692"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HEZ2129938.1"
                     /translation="MSWLDKILPPKIKNRSKDGSSNVPEGLWHKCPSCSATVYSTELQ
                     QNNQVCPKCNHHNPLSARQRLNLLLDDDGREEVAGNVKPTDPLKFKDGKKYPDRLSAA
                     RKLTGEDDALVVMKGKMNGLPVVVAAFEFRFIGGSMGSVVGERFVQGVRRAVADNCPF
                     VCVAASGGARMQEGVNSLMQMTKTSAALHLLTEKRLPFISVLTDPTMGGVSASFAFLG
                     DVVLAEPNALIGFAGPRVIEQTVRETLPEGFQRAEFLLEKGAIDQIVDRREMKRRISD
                     LITLLCRQDKVSAA"
     gene            complement(1916..2701)
                     /locus_tag="WHR07_000693"
     CDS             complement(1916..2701)
                     /locus_tag="WHR07_000693"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEZ2129939.1"
                     /translation="MSRIRQAFAALDGGKALIPYITVGDPDIRTTLALMHGMVANGAD
                     ILELGVPFSDPMADGPVIQRAAERALANGISLRDVLDVVRKFRETDTQTPVVLMGYLN
                     PVHKMGYREFAQEAAMAGVDGVLTVDSPVETIDPLYRELKDNGVDCIFLIAPTTTEDR
                     IKTIAELAGGFVYYVSLKGVTGAASLDTDEVSRKIEYLHQYIDIPIGVGFGISNAENA
                     RKIGRVADAVIVGSRIVKEIENNAGNEAAAVGALVKELKDAVR"
     gene            complement(3128..3220)
                     /locus_tag="WHR07_000694"
     tRNA            complement(3128..3220)
                     /locus_tag="WHR07_000694"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3184..3186),aa:Ser,seq:gct)
     gene            complement(3377..3574)
                     /locus_tag="WHR07_000695"
     CDS             complement(3377..3574)
                     /locus_tag="WHR07_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129940.1"
                     /translation="MAHGHKARADGLAQQPDKAAEANEEEYLTKALSQNLLSTLDVAL
                     ARFPEDAWFQEIKQDAQKHFA"
     gene            complement(3679..3996)
                     /locus_tag="WHR07_000696"
                     /pseudo
     CDS             complement(3679..3996)
                     /locus_tag="WHR07_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237659.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
     gene            complement(4019..4780)
                     /gene="kdsB"
                     /locus_tag="WHR07_000697"
     CDS             complement(4019..4780)
                     /gene="kdsB"
                     /locus_tag="WHR07_000697"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HEZ2129941.1"
                     /translation="MTEFVVLIPARLDSSRLPGKALADIHGKPMVVRVAEQAAKSKAV
                     RVVVATDHPDIQTACQAHGVEVVMTSNRHESGTTRLAEASAALKLPPHLVVVNVQGDE
                     PLIAPELIDRTAEVLVENNVQMATAAHELHDFDELMNPNAVKVVLDKNRNAIYFSRAP
                     IPYPRDAMRAGKREMPFETAVLRHIGIYAYRVGFLQRYTEMSVSSLETIESLEQLRVL
                     WHGYSIAVETAKEAPAAGVDTQEDLDRVRAVFQTV"
     gene            complement(4777..4959)
                     /locus_tag="WHR07_000698"
     CDS             complement(4777..4959)
                     /locus_tag="WHR07_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HEZ2129942.1"
                     /translation="MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPY
                     MLENEARALSEEELKA"
     gene            complement(5028..5609)
                     /locus_tag="WHR07_000699"
     CDS             complement(5028..5609)
                     /locus_tag="WHR07_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HEZ2129943.1"
                     /translation="MKLKTLLLPFATLALCTNAFAAPPSDASLARWLDTQNFDRDIEK
                     NMIEGFNAGFKPYADKALAEMPEAKKDQAAKAFNRYRENVLKDLITPEVKQAVRNTLL
                     KNAREIYTQEEIDGMIAFYGSPVGQSVVAKNPRLIKKSMSEIAVSWTALSGKIARHHL
                     PAFTEELRRIICGGKNPDAGCKQAGQVGKRHQK"
     gene            complement(5815..6849)
                     /locus_tag="WHR07_000700"
     CDS             complement(5815..6849)
                     /locus_tag="WHR07_000700"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_025462052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HEZ2129944.1"
                     /translation="MPNCFKFHTVIERHWQKPYPVLSFLLKPLSGLFAKIAAKRRTDF
                     LSGKRQSEKLPVPVVVVGNIHAGGTGKTPIVAALVSGLQEKGVKVGIISRGYGRKSKA
                     VHVLNAESRAEDAGDEPLLLFRKTGAPTAVGSSRAEAGRALLAAHPDIGLIVADDGLQ
                     HYALRRDVEIAVFPSADTGRTDLDLLPNGSLREPLLRLDSVDAVVVSGGKADALFRPS
                     ENMFHSRIEAGRIYRLNNPSEILDTGRLKNQTVVAVAGIAKPARFFDSLRNMGITVKR
                     TVALPDHADISAADLPDADAVIITEKDAVKFSDGICTDNVWVLPVCAIIEPDLAAFVL
                     ERLEDVPKAV"
     gene            complement(6889..7160)
                     /locus_tag="WHR07_000701"
                     /pseudo
     CDS             complement(6889..7160)
                     /locus_tag="WHR07_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713445.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(7396..8676)
                     /locus_tag="WHR07_000702"
     CDS             complement(7396..8676)
                     /locus_tag="WHR07_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme"
                     /protein_id="HEZ2129945.1"
                     /translation="MENSLKEAALKFHELPVPGKISVTPTKSLATDKDLALAYSPGVA
                     APCMEIHADPQNAYKYTAKGNLVAVISNGTAVLGLGDIGALAGKPVMEGKGVLFKKFA
                     GVDVFDIEIDEKDPQKLVDIIAALEPTFGGINLEDIKAPECFYIERELRKRCKIPVFH
                     DDQHGTAIITAAAVLNALRFTGRKIEEATLVCSGAGAAAIACLNQLLDLGLKRENVTV
                     CDSKGVIYKTREDKDRMDESKQFYAIEDNGQRVLADAVKGKDIFLGLSGANLLTPEML
                     NTMNEKPIVFAMANPNPEILPPLAKETRPDVVIGTGRSDFPNQVNNVLCFPFIFRGAL
                     DVGATTINEEMKRACVYALADLAMEEVTEEVVAAYGKKFEFGAEYLIPTPFDSRLLPR
                     VATAAAKAAMESGVATRPIADLEAYAAKLSEWKL"
     gene            complement(8898..9518)
                     /locus_tag="WHR07_000703"
     CDS             complement(8898..9518)
                     /locus_tag="WHR07_000703"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEZ2129946.1"
                     /translation="MKPQFITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTP
                     VGETLREILLNPETKAGLRAETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFA
                     YQGGGRGMPSEDIEILEHWVQGGLRPDLTLLLDVPLEVSMARIGQTREKDRFEQEQAD
                     FFMRVRSVYLNRAAACPERYAVIDSNLGLDEVRNSIEKVLDGHFGC"
     gene            complement(9578..10573)
                     /gene="mltG"
                     /locus_tag="WHR07_000704"
     CDS             complement(9578..10573)
                     /gene="mltG"
                     /locus_tag="WHR07_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEZ2129947.1"
                     /translation="MLKKMLKWTAVFLTVSAAVFAALLFVPKDNGRAYRIKIAKNQGI
                     SSVGRKLAEDRIVFSRHVLTAAAYALGVHNRLHTGTYRLPSEVSAWDILQKMRGGRPD
                     SVTVQIIEGSRFSHMRKIIDATPDIEHDTKGWSNEKLMAEVAPDAFSGNPEGQFFPDS
                     YEIDAGGSDLQIYQTAYKAMQRRLNEAWESRQDGLPYKNPYEMLIMASLVEKETGHEA
                     DRDHVASVFVNRLKIGMRLQTDPSVIYGMGAAYKGKIRKADLRRDTPYNTYTRGGLPP
                     TPIALPGKAALDAAAHPSGEKYLYFVSKMDGTGLSQFSHDLIEHNAAVRKYILKK"
     gene            10657..11229
                     /gene="ampD"
                     /locus_tag="WHR07_000705"
     CDS             10657..11229
                     /gene="ampD"
                     /locus_tag="WHR07_000705"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HEZ2129948.1"
                     /translation="MDNHAEAHWQDGWLQSVRHIPSPNFGPRESKEEVSLVVLHNISL
                     PPFEYGTDAVEKLFANRLDPNDHPFFGLIHTLRVSSHFLIKRDGKTVQFVSCGDMAYH
                     AGVSSFRGREKCNAFSIGIELEGCDFEPFAEAQYRSLEALLDAICRRYPITAVTGHQD
                     IAPGRKTDPGHFFDWRRIRGKGFPVDRNAV"
     gene            11423..12709
                     /locus_tag="WHR07_000706"
     CDS             11423..12709
                     /locus_tag="WHR07_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HEZ2129949.1"
                     /translation="MIYIVLFLAAVLAVVAYNMYQENQYRKKVRDQFGHSDKDALLNS
                     KTSHVRDGKPSGGSVMMPKPQPAVKKTAKPQDPAMRNLQEQDAVYIAKQKQAKVSPFK
                     TEIETALEESGIIGNSAHTVSEPQTGHSAPKPADAPAKPAPVPQTPAKPLITLKELSK
                     VELPWFDVRFDFISYIALTEAKELHALPRLSNRCRYQIVGCTMDDHFQIAEPIPGIRY
                     QAFIVGIQAVSRNGLASQEELSAFNRQVDAFAQSMGGQTLHTDLAAFIEVASALDAFC
                     ARVDQTIAIHLVSPTSISGVELRSAVTGVGFVLEDDGAFHYTDTSGSTMFSICSLNNE
                     PFTNALLDNQSYKGFSMLLDIPHSPAGEKTFDDLFMDLAVRLSGQLNLNLVNDKMEEV
                     STQWLKDVRTYVLARQSEMLKVGIEPGGKTALRLFS"
     gene            12857..15382
                     /gene="ligA"
                     /locus_tag="WHR07_000707"
     CDS             12857..15382
                     /gene="ligA"
                     /locus_tag="WHR07_000707"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEZ2129950.1"
                     /translation="MNPNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEY
                     YTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVGGEPLAGFAEVRHEVPML
                     SLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGKPEYVIEPKFDGLAISLLYRDGVL
                     VQAATRGDGTTGEDVTQNIKTVANIPLRLHGENTPELIEVRGEVLMQKADFAALNKRQ
                     AENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSVARQQGGFVAEEHIQELAYF
                     QALGFSLPNGNFGCFKNIDEVLAFYEQMQQKRPELPYEIDGMVVKVNSLAQQRELGFI
                     SRAPRWAIAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGGVTVTNATLHNQ
                     DEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMRETAVAVSDGIGHRQDDLFAET
                     PSANQTQSVPLHKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRAQGLIHFAS
                     RKAMDIDGLGEKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETADKTVAESDQMPSEG
                     SSVGASGKHKKQPVKWAENILAGIEASKTPELARFLFALGIRHVGERTAKTLAQAFGT
                     LERVRRAPEPVLACLPDIGTVVARSIAHFFAQAEQQAMIDELLAAGVAPQTQAVTIPP
                     ARHAEPQRWIARLPGFKISENKAQALWELAGKNIEGLQTDKALPTDWQAWRSEPQNAA
                     LLENLKTFFAQMPSEDEAAQGSDGINKAVAGKTFVLTGTLPTLKRDQAQSLIEAAGGK
                     VSGSVSKKTDYVVAGEAAGSKLEKANALGVSVLSEAELLTLLG"
     gene            15439..16614
                     /locus_tag="WHR07_000708"
     CDS             15439..16614
                     /locus_tag="WHR07_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase-like protein"
                     /protein_id="HEZ2129951.1"
                     /translation="MHTISFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNG
                     LPEAAYIDALLTDLQLELPNIWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQ
                     PEAEITLEANPGTFEIEKFQGFKDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAI
                     DTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIATGATHISAYHLTMEPNTPFGHTP
                     PKGLPQDEAALDIEDAVHGALEGAGFVHYETSAFAKPAMQCRHNLNYWQFGDYLGIGA
                     GAHGKISYPDRIERTVRRRHPNDYLALMQSQPSEAVERKTVAAEDLPFEFMMNALRLT
                     DGVPAAMLQERTGVPSAKIMAQIETARQKGLLETDPAVFRPTEKGRLFLNDLLQCFL"
BASE COUNT         4005 a         4894 c         4056 g         3675 t
ORIGIN      
        1 atttatttgt gcttgacgac cagcgtgaac acgccctcct gttcggaagc atccaacagc
       61 acatgaccgg tttggcggca aaaagcctca aaatcccccg gtgcgccgcc gtcggttgcc
      121 agaacggtca acacgtcgcc ctgctgcatt tgcgccaaag cctttttcgc ccgcaaaatc
      181 ggcaggggac atttcaatcc ggttacgtct aaagtttcgc tgttcatcgt ttgtaccgtt
      241 taaaaaatgg gaatcggggg gagattatac cccagttgct tgcagccccc tttgccaacc
      301 cataaaataa cgccgttttc aatttggaga aacttatgcg ccgcaccgcc ctcctgctgc
      361 tcgcactcac cgccggcacg tcccttgctg ccggcttcaa ccaaaaagac acgccgatca
      421 acacccgcta ccgcgaaacg cccgaagaag ccgccgcccg cgaatttaaa gaacataccg
      481 ccaaactgcc gccgctgccc gatacgcact cggacggctg gttcgacatt tatgtggatg
      541 aaaattacgg caaacagccg aaaatcctgc tcgacagcct gcaaattatg cccgcgcccg
      601 acggcagcat ccgctacatt ctcaatatcc gctccgacaa aggctacgac aacctgactg
      661 ccgaaggcat attctgcgcc cgcttctcca tcaggttcgg caacggcaaa ccttcctcct
      721 ataaagtgtt cggctacggc gacacggtca accgccgctg gatacagccc cgaaacgccg
      781 aatggaaacc gataggcggt acattaagcc gcaacgacgc actgcgcacc gtcctgtatc
      841 aggcattctg cgagggcgat gtacccgccg acacgaaagg tttggtacaa cgcctgaaag
      901 aacgtgccgg acgctatgcc ccgtcgataa agccgcacaa caaataacca gacacaaaaa
      961 taccgtctga aacatcggtt tcagacggta ttcgattcat cagccatcaa gcggcggaaa
     1021 ctttgtcctg acggcacaac agcgtaatca aatcactgat gcgccgcttc atctcacgcc
     1081 ggtcaacaat ctggtcgatt gcgcctttct ccagtaaaaa ctcagcacgc tggaagcctt
     1141 ccggcaaggt ttcccgtaca gtctgttcaa taacgcgcgg tcccgcaaaa ccgattaggg
     1201 cattgggttc agccaatacg acatcaccca aaaatgcgaa gctggcggat acgccgccca
     1261 tagtcggatc ggtcaacacc gatataaacg gcaggcgttt ttccgtcagc aaatgcagcg
     1321 cggcactggt tttcgtcatc tgcatcaatg agttcacacc ctcctgcata cgcgcaccgc
     1381 cggaagccgc cacacagacg aacggacaat tgtcggcaac cgcccggcgg acgccctgta
     1441 cgaatcgttc gcccacaacc gaacccatcg aaccgccgat aaagcggaac tcaaacgcag
     1501 caaccacaac gggcagaccg ttcatcttgc ctttcattac caccaaagca tcatcttccc
     1561 cggtcagctt gcgtgccgca ctcaaacgat ccggatattt tttgccgtct ttaaacttca
     1621 aaggatctgt cggtttgaca tttccggcaa cctcctctct gccatcatca tccaaaagca
     1681 gattcaggcg ttgtcgtgcc gacaacggat tgtggtggtt gcatttcgga caaacctgat
     1741 tgttctgctg caactcggtc gaataaacgg ttgccgaaca agacggacat ttgtgccaca
     1801 aaccctcggg aacattggaa gaaccgtctt tgctgcggtt tttgattttg ggtggcagga
     1861 ttttatctaa ccagctcatg gacaactcct aaaatattta gaatgcgtga cagaatcagc
     1921 gcacggcatc cttcaactct ttgaccaaag caccgacggc cgcagcctcg ttgcccgcat
     1981 tgttttcaat ctctttcaca atccggctgc cgacaatgac cgcgtcggca acccggccga
     2041 ttttgcgcgc gttttccgca ttgctgatgc cgaaaccgac accgatggga atatcgatat
     2101 actgatgcaa atactctatt ttacgcgaaa cctcatccgt atccaaactt gccgcgcccg
     2161 ttacgccctt gagcgaaaca taatagacaa atccgcctgc cagctcggca atggttttaa
     2221 tacggtcttc cgtcgtcgtc ggcgcaatca ggaaaataca gtcgaccccg ttatccttca
     2281 gctcgcgata gagcggatcg atggtttcga caggggaatc caccgtcaac acgccgtcca
     2341 cacccgccat tgcggcttcc tgagcaaact cccgataacc catcttatgt acagggttca
     2401 aatatcccat caaaacaacc ggcgtttgcg tgtcggtttc acggaatttt ctgacgacat
     2461 ccaagacatc gcgcagcgaa atcccgtttg ccaacgcccg ctccgccgca cgctgaataa
     2521 ccggtccatc cgccatcgga tcggaaaacg gcacgcccaa ctccaaaata tccgcaccgt
     2581 ttgcaaccat gccgtgcatc aatgccaaag ttgtccgaat atcggggtcg cccaccgtaa
     2641 tatagggaat caatgccttt ccgccatcca aagcggcaaa agcctgccgg attctgctca
     2701 tttgtctctt ccatcctatc ggcaaatatg ccataaaaca caatcagtaa atttttccca
     2761 gtataacatt tgcggtacgg ataggcgaat acggcaaaca gaaaccacgc aaatcagagc
     2821 cgccgtttga acgaggcgga aataaacggc aagcatctcg gattatagtg gattaacaaa
     2881 aatcaggaca aggcggcgaa gccgcagaca gtacaaatag tacggagccg attcacttgg
     2941 tgctccagca ccttagagaa tcgttctctt tgagctaagg cgaggcaacg ccgtactggt
     3001 ttttgttaat ccactataac aaaattcaga atcaagacag ggcaatacca tactggtttt
     3061 gcaccaaccc gctataaaat tgcataaaaa aaatagacgc tgtaaaacac agcgtctatt
     3121 ttttatctgg cggagtaaga gggattcgaa ccctcgatgc aggttgaccc cacatgcttc
     3181 cttagcaggg aagtgccttc agcctctcag ccattactcc taaggaggct gtaactataa
     3241 tcaacttttc cgataccgtc aaggaaaaac agaaagcaaa tattaatctt ttgaaataaa
     3301 ataagattta ccctgattat acccaatcag gcacttcttt tcttcctgaa tggaaatatt
     3361 cctgactgcc acatcctcaa gcaaaatgct tttgtgcatc ctgtttgatt tcctgaaacc
     3421 acgcgtcttc aggaaaacgt gcaagcgcga catccaatgt tgacagcagg ttttgcgaca
     3481 gggctttggt caggtattcc tcctcgttgg cttctgccgc tttgtcgggc tgttgtgcca
     3541 aaccgtcggc acgggctttg tgtccgtgtg ccaaatatag tggattaaca aaaatcagga
     3601 caaggcgacg aagccgcaga cagtacagat agtacgacaa ggcgaggcaa cgccgtactg
     3661 gtttaaattt aatccactat aattgagcgc ggtaattttt tgcgcccaaa gctgcggtat
     3721 gtcgggattg tcttcaatca tgacggaaag gatggatacg gcggtcgcca gcctgccgcc
     3781 gttcattcta aggtcgaggg aacggttggg cggcagggtg ctgagtgttt ctgccattct
     3841 gaaccaaaat tcgccgctgg cttcgtcggg tgcgttcaat ttaagcattt catagtgaac
     3901 ctcctgatca tcgttttgca cgagacccca tacttcggca aggattttct gttcttcacg
     3961 gcttaagtgc tgccactttt caatatgttg ctgcatatct tttccctttg aacctgtttt
     4021 atacggtctg aaatacggcg cggaccctgt ccaaatcttc ctgcgtatcc acaccggcgg
     4081 cgggggcttc tttggcggtt tcgacggcaa tcgagtagcc gtgccacagg acgcgcagtt
     4141 gctccagcga ttcaatggtt tccagcgacg aaacgctcat ttcggtgtag cgttgcagga
     4201 agccgacgcg gtaggcgtag atgccgatat ggcgcaggac ggcggtttca aacggcattt
     4261 cgcgttttcc tgcacgcatc gcatcgcgcg gatagggaat cggggcgcgg ctgaagtaga
     4321 tggcgttgcg gtttttgtcg aggacgactt tgacggcatt gggattcatc aattcgtcga
     4381 aatcgtgcaa ttcgtgtgcc gcagttgcca tctgtacgtt gttttccacc aagacttcgg
     4441 cagtgcggtc gatgagttcg ggggcaatca gcggctcgtc gccctgtacg ttgacaacca
     4501 ccagatgcgg cggcagcttc agcgcggcag aggcttcggc aaggcgcgtc gtgccgcttt
     4561 cgtgccggtt tgaagtcatg acgacttcga cgccgtgcgc ctgacaggcc gtctgaatat
     4621 cgggatggtc ggtggcaacg acgacgcgca cggctttact ttttgccgcc tgttcggcaa
     4681 cgcgcacgac catcggttta ccgtggatat ccgccaaggc ttttccgggc aggcgcgatg
     4741 aatccagccg cgccggaatc aatacgacga attcagtcat gctttgagtt cctcttcgct
     4801 caacgctcgc gcttcgtttt ccagcatata gggaatgccg tctttaatcg gataggcaag
     4861 cttcgcctga cggctccaca attcctgttt gtcctgatga tattccagcc tgcctttggt
     4921 aacggggcag acgaggatgt ctaagaattt tttttccata gggttgcttt cgggtttgat
     4981 ggttcaatca atcggatgcc ctcttcaata tttcagacgg ctatcattta tttctgatgc
     5041 cttttcccaa cctgtccggc ttgtttacag cccgcatcgg gatttttacc gccgcagatg
     5101 atgcgccgca actcttccgt aaacgcgggc agatgatgtc gcgcgatttt ccctgacaat
     5161 gcagtccaag atactgctat ttcactcatc gatttcttga ttaagcgcgg atttttggca
     5221 acgacggact gaccgacagg cgaaccgtaa aaggcaatca tgccgtcaat ttcttcttgc
     5281 gtgtatatct cacgggcatt cttcaataaa gtattgcgga cagcctgttt cacttcgggc
     5341 gtaatcaaat ctttcaaaac attctcacga tagcggttaa aggcttttgc cgcctgatct
     5401 tttttcgctt ccggcatttc ggcaagggct ttgtccgcat acggtttaaa tccggcatta
     5461 aagccctcaa tcatattttt ttctatatcc cggtcaaaat tctgcgtatc cagccaacgc
     5521 gccaacgacg cgtcgctggg cggggcggca aaagcgttgg tgcacaatgc cagcgtggcg
     5581 aagggcaata acaaggtttt cagtttaata ttcaatactt taacgaatga ttaatgcaga
     5641 taaaaaatac gaccgatttt ctcattcctg tccaagtgga aatccggaga tttgggattt
     5701 ctgaagcctc ctaggcattc ctgaaaattc gagacttaga ttcccgcctg cgcgggaatg
     5761 acggcgcgag gcgttcttat tcaaatccgt aatcactccg cccaaaccgt gctttcagac
     5821 ggccttcggt acatcttcca accgctccaa cacaaacgcc gccaaatcag gttcgattat
     5881 cgcacaaacg ggcaacaccc aaacattatc ggtgcaaatg ccgtctgaaa atttgaccgc
     5941 atctttctcc gtaataatga ccgcgtccgc atcgggcaaa tctgccgccg aaatgtcggc
     6001 gtggtcaggc agcgcgacgg ttcgcttcac ggtaatgccc atattccgca acgaatcgaa
     6061 aaaacgcgcc ggcttggcaa tacctgccac ggcgacgacg gtttgatttt tcagacggcc
     6121 tgtgtccagt atttcggacg gattgttcaa acggtaaatc cgtcccgctt cgatacggct
     6181 gtgaaacata ttttcagacg gcctaaacag cgcatccgcc ttgccgccgc tgacgacgac
     6241 cgcatccacc gaatccagcc gcaacaaagg ttcgcgcaaa ctgccgttgg gcagtaaatc
     6301 caaatccgtg cgccccgtat ccgccgacgg aaacaccgcg atttccacat ctcgccgcag
     6361 ggcgtaatgc tgcaaaccgt cgtccgccac aatcagtccg atgtcgggat gcgccgccag
     6421 caacgccctg cctgcctctg cacggctgct gcccaccgcc gtcggcgcac cggttttgcg
     6481 gaacagcagc aaaggctcat cgcccgcatc ttccgctcgg ctctcagcat tcaatacatg
     6541 aaccgccttg ctcttgcgcc cgtagccccg gctgatgatg ccgaccttga cgcccttttc
     6601 ctgcaaaccc gacaccagcg cggcaacaat cggcgttttc cccgtcccac ccgcgtgaat
     6661 attgccgacc acgaccacag gcacgggcag cttttcgctt tgccgttttc ccgataaaaa
     6721 atccgtccgc cgttttgccg caattttggc aaacagcccg gagagcggct taagcagaaa
     6781 agacaaaacc ggataaggtt tttgccaatg ccgttcgata acggtatgaa atttgaaaca
     6841 attcggcata ttcgatacaa atcctcgaag caaaatcagc ccggggcatt aatcatgcgt
     6901 acccgataca gacccaccta taaacaacgc gaagaccaaa ccgataagcg aaccaatcag
     6961 gtaaataagc aactgcgctt tacagaaatt ggcgcggttc gggttgcctc tgccgaacac
     7021 ccaaacaaaa attgaccaaa ggaatcatga aaacaatcat cgtcaacacc cactgccctg
     7081 tcgtcatgac gggaggcggt ttgttttgaa gtctcgggca tatcgccaat atgataacgg
     7141 acaggtttca tctctttcat ttgccagtat ctttcattta tagtggatta acaaaaacca
     7201 gtacggcgtt ggctcgcctt agctcaaaga gaacgattct ctaaggtgct gaaacaccaa
     7261 gtgaatcggt tccgtactat ttgtactgtc tgcggcttcg tcgctttgtc ctgatttttg
     7321 ttaatccact atatcaatct gacagcaaaa tgccgcctga aaacagttca gacggcattt
     7381 taaaccgcaa acggcttaca gcttccattc gctcagcttg gcagcgtaag cttccaaatc
     7441 tgcaatcgga cgggttgcca cgccgctttc catcgctgct ttggcggcag ccgtagcaac
     7501 gcgcggcagc aggcgggaat cgaacggagt cggaatcagg tattccgcgc cgaattcaaa
     7561 tttcttaccg taagcggcaa ccacttcttc ggttacttct tccatcgcca aatccgccaa
     7621 agcatacacg caggcgcgtt tcatttcttc gttgatggtc gtcgcgccga catccaacgc
     7681 gccacggaag atgaacggga agcacaatac attgttcact tggttcggga agtcggagcg
     7741 gccggtaccg ataaccacgt ccggacgggt ttctttcgcc agcggcggca ggatttccgg
     7801 attcgggttg gccatagcga acacgatggg tttttcgttc atcgtgttca acatttcggg
     7861 ggtcagcagg ttcgcgccgg acagacccaa gaagatgtct ttgcctttaa ccgcatcggc
     7921 caatacgcgc tggccgttgt cttcaatggc gtagaactgt ttagactcat ccatgcgatc
     7981 tttgtcttcg cgggttttgt aaatcacgcc ttttgagtcg caaacggtca cgttttcgcg
     8041 tttcaagccc aaatccagca attggttcaa gcaggcaatc gcggccgcac ccgcaccaga
     8101 gcaaaccaag gtcgcttctt cgattttacg gccggtaaaa cgcagggcgt tcaatacggc
     8161 agcggcggta atgatggccg tgccgtgctg gtcgtcgtgg aatacgggga ttttgcagcg
     8221 tttgcgtaat tcgcgttcga tgtagaaaca ctcgggtgct ttgatgtctt cgaggttgat
     8281 gccgccgaag gtcggctcta aagcggcgat gatgtccacg agtttttgcg ggtctttttc
     8341 atcgatttcg atgtcgaaca cgtccacacc ggcgaatttt ttgaacaata cgcctttacc
     8401 ttccatcacg ggtttgcccg ccagcgcgcc gatgtcgccc aagcccaaaa cggccgtacc
     8461 gttggaaatg acggcgacca agttgccttt ggcggtgtat ttgtaggcat tttgcggatc
     8521 ggcatggatt tccatacaag gagcggctac gcccggagag tacgccaacg ccaaatcttt
     8581 gtcggtcgcc aaagatttgg tcggggtaac ggaaattttg cccggaacgg gtaattcgtg
     8641 gaacttgagg gcggcttctt tcaatgagtt ttccatgtgt caatcctgtt gcgagaaaaa
     8701 gatttgaatc ggactgtccg aaacgctttc gggtcatcat gttacgggcg gttcgttaat
     8761 attgccgacg catcctgcct tgtaaccgag cgtaattcta tcatgccgaa agtttggcgc
     8821 ataccgccat tttcacctgc ggcactgccg tttgattttc ggcgcgggcg gatgcgcttg
     8881 tttcaatatt tgccgcatta acagccgaaa tgtccgtcca acactttttc tatgctgttt
     8941 ctgacttcat ccaagccgag gttactgtcg ataacggcgt aacgttccgg acaggcggcg
     9001 gcacggttca gataaacgct gcgcacacgc atgaagaaat ctgcctgttc ctgctcgaaa
     9061 cggtctttct cgcgcgtctg cccgatacgc gccatcgaca cttccagcgg cacatccaac
     9121 agcagggtca aatcggggcg caaaccgccc tgcacccaat gttccaaaat ttcaatgtct
     9181 tcagacggca tcccccgccc gccgccctga taggcgaagg ttgcatcggt aaaacggtcg
     9241 gacacgacat ggatgccgtc tgaaagcgcg ggcaatatca cgtcttcaat atgctgcatt
     9301 ctggcggcga acatcatcag ggtttccgca cgcaaaccgg ctttggtttc agggttgagc
     9361 aggatttcgc gcaaggtctc accgaccggc gttccgcccg gctcgcgcgt gaacagcacg
     9421 ggcagccccc tccgttcaaa ccatgccttg atgacggcaa ggttggtgga tttgccggca
     9481 ccgtctatgc cgtccaaagt gatgaattgc ggtttcatgc ttgcagttcc ggtaagggta
     9541 tgccgtctga aaacacaaac ttttcagacg gcatggttta ttttttcaaa atatatttgc
     9601 gaacggcggc gttgtgttcg atcaaatcat ggctgaactg gctcaagccc gtgccgtcca
     9661 ttttggacac gaaatacagg tatttttcgc cagacggatg ggcggcggca tcaagcgcgg
     9721 ccttgccggg cagcgcgatc ggggttggcg gcagaccgcc gcgcgtgtag gtgttgtacg
     9781 gcgtgtcgcg gcgcaggtcg gctttacgga ttttgccctt gtatgccgca cccatgccgt
     9841 aaatcacgga cgggtcggtt tgcaggcgca taccgatttt cagccggttg acgaagacgg
     9901 aagcgacatg gtcgcggtcg gcttcatgcc ccgtttcctt ttcgaccagg ctcgccataa
     9961 tcagcatttc ataaggattt ttataaggca gcccgtcctg cctgctttcc catgcctcat
    10021 tcaggcggcg ttgcatcgcc ttgtaggcgg tttggtaaat ctgtaaatcg ctgccgcccg
    10081 catcgatttc gtagctgtcg gggaaaaact gcccttcagg attgccgctg aaggcatcgg
    10141 gcgcaacttc cgccatcagt ttttcattgc tccagccttt ggtgtcgtgt tcgatgtcgg
    10201 gcgttgcgtc gatgattttc ctcatatgcg aaaaacgcga accttcgata atctgcacgg
    10261 taacggaatc cggcctgccg ccgcgcattt tctgcaagat atcccaagcc gacacttccg
    10321 aaggaagcct gtacgtacct gtgtgcaacc tgttatgcac gcccaaagca taggctgccg
    10381 ccgtcaaaac atgtctgctg aacacgatgc ggtcttcggc aagtttcctg ccgaccgacg
    10441 aaataccctg gtttttggca attttgattc ggtatgccct gccgttgtct ttagggacaa
    10501 aaagcagcgc ggcgaaaacg gctgccgata cggtcaaaaa aacggcagtc catttcaaca
    10561 tttttttcaa catggtagga ttcccagcat tcggaatacg tcttaaaatt cgggcgacag
    10621 tataacccaa attgcccgcc ggacaggaag aacatcatgg acaatcacgc cgaagcacac
    10681 tggcaggacg gttggctgca aagcgtgcgc cacattccgt cgccgaattt cggcccgagg
    10741 gagtccaaag aagaggtttc ccttgtcgta ttgcacaata tctcgctgcc gccgttcgaa
    10801 tacggcacgg atgcggtgga aaagcttttt gccaaccgcc tagacccgaa cgaccacccg
    10861 tttttcggat tgatacacac tttgcgcgta tccagccatt tcttaatcaa acgcgacggc
    10921 aaaacggtgc agttcgtatc atgcggcgat atggcgtacc acgcgggcgt atcctcgttt
    10981 cgcggacggg aaaaatgcaa cgcattttcc atcggcatcg aactggaagg ctgcgatttc
    11041 gaaccgtttg ccgaagcgca ataccgttcg ctcgaagcct tgttggacgc aatctgccgc
    11101 cgctacccca tcacagcggt aacggggcac caagacatcg cgcccggccg caaaaccgac
    11161 cccggccatt ttttcgactg gcggcggata cgggggaaag ggtttcccgt ggacagaaat
    11221 gccgtctgaa aaccacagat ttcagacggc atttcggaaa atttccgctt atttcgacac
    11281 actgctgtca gaccctgcaa ttttcgttat aattcaaacg ttataaccgg ccgttccatc
    11341 agactgccgg aaacgcaagc ccgatttaac cgcagtaccc gcacttcgcg catcctgcat
    11401 cccgaaattt aaagtgattg ccatgattta catcgtactg ttcctcgccg ccgtcctcgc
    11461 cgttgtcgcc tacaatatgt atcaggaaaa ccaataccgc aaaaaagtgc gcgaccagtt
    11521 cggacactcc gacaaagatg ccctgctcaa cagcaaaacc agccatgtcc gcgacggcaa
    11581 accgtccggc gggtcagtca tgatgccgaa accccaaccg gcggtcaaaa aaacggcaaa
    11641 accccaagac cccgccatgc gcaacctgca agaacaggat gccgtctaca tcgccaagca
    11701 gaaacaggca aaagtatcac cgttcaaaac cgaaatcgaa accgccttgg aagaaagcgg
    11761 cattatcggc aactccgccc acaccgtttc cgaaccccaa accggacatt ccgcaccgaa
    11821 acctgccgac gcgccggcaa aacctgcacc cgttccgcaa acacctgcaa aaccgctgat
    11881 tacgctcaaa gaactgtcaa aagtcgaatt accctggttt gacgtgcgct tcgacttcat
    11941 ctcctatatc gcgctgaccg aagccaaaga actgcacgca ctgccgcgcc tttccaaccg
    12001 ctgccgctac cagattgtcg gctgcaccat ggacgaccat ttccagattg ccgaacccat
    12061 cccgggcatc cgctatcagg catttatcgt gggtattcag gcagtcagcc gcaacggact
    12121 tgcctcgcag gaagaactct ccgcattcaa ccgccaggtg gacgcattcg cacaaagcat
    12181 gggcggtcag acgctgcaca ccgaccttgc cgcctttatc gaagtggctt ccgcactgga
    12241 cgcattctgc gcgcgcgtcg accagaccat cgccatccat ttggtttccc cgaccagcat
    12301 cagcggcgta gaactgcgtt ccgccgtaac gggcgtgggt ttcgttttgg aagacgacgg
    12361 cgcgttccac tataccgaca cgtcgggctc aaccatgttc tccatctgct cgctcaacaa
    12421 cgagccgttt accaatgccc ttttggacaa ccagtcctac aaaggcttca gtatgctgct
    12481 cgacatcccg cactctccgg caggcgaaaa aaccttcgac gatttgttta tggatttggc
    12541 ggtacgcctg tccggccagt tgaacctgaa tctggtcaac gacaaaatgg aagaagtttc
    12601 gacccaatgg ctcaaagacg tgcgcactta tgtattggct cgtcagtccg agatgctcaa
    12661 agtcggtatc gaaccgggcg gcaaaaccgc attgcgcctg ttctcctaaa atcgaatgca
    12721 atcaaagcgg atatgtcgtt acggcatatc cgcttttttt cgggtaaaat tcagctgttt
    12781 tcaacctatc atttttcaga cgacctttgc ccgtttcatc ccgtatcaga caaaggtcgt
    12841 ctgaaaacct tctctcatga atccaaactc aaaacataac actaacttta ccaatcttct
    12901 taaaccgtct gatagtgata taaaacaatt tgccgcacaa cacatccgcc acctcaccga
    12961 cctgctcaac cgctatgcct acgaatacta caccctcgac gcgcccagcg tacccgatgc
    13021 cgaatacgac aaattattcc gcgagctcga agcgttggaa ttaaaccatc ccgagctcaa
    13081 actgcccgac agtccgaccc agcgcgtcgg cggcgagcct ttagcgggat ttgccgaagt
    13141 gcgccacgaa gtgccgatgc tgtcgctgac caacgctttt tccccgcaag atgaaaacgg
    13201 cgtgttcgac catgccgaaa tgtacgcttt cgaccaacgc gtgcgcgacg gtttggacgg
    13261 cggcaaaccc gaatacgtta tcgaacccaa attcgacggc ctcgccatca gcctgctcta
    13321 ccgcgacggc gtattggtac aggcggcaac gcgcggcgac ggcacaacgg gcgaagacgt
    13381 tacccaaaac atcaaaaccg tcgccaacat ccccctgcgg ctgcacggcg aaaatacgcc
    13441 cgaactcatc gaagtacgcg gcgaagtact aatgcaaaaa gccgattttg ccgccctcaa
    13501 taaaagacaa gccgaaaacg ggcaaaaacc ctttgccaat ccgcgcaacg ccgctgccgg
    13561 cagcctgcgc caactcgatt cgcgcatcac tgcgcaacgc aaactgcact ttttccccta
    13621 ctccgtcgcc cgccagcaag gcggtttcgt cgcggaagaa cacatccaag aactcgccta
    13681 tttccaagca ctcggcttca gtctgccaaa tggcaatttc ggctgtttca aaaatatcga
    13741 cgaagtattg gcgttttacg aacaaatgca gcaaaaacgc cccgaactgc cctacgaaat
    13801 cgacggtatg gtggtcaaag tcaacagctt ggcgcaacag cgcgaactcg gcttcatctc
    13861 acgcgcgcca cgctgggcga ttgcccacaa attccctgcc gaagaagccc tgaccattgt
    13921 cgaagcgatt gacgtgcaaa tcggcaggac gggcgcggta acgccggttg cccgattaca
    13981 acccgtattc gtcggcggcg taaccgttac caacgccacc ctgcacaatc aggacgaagt
    14041 atcgcgtaaa gacgtgcgcg tcggcgatac cgtcgtcgtg cgccgcgccg gagacgtgat
    14101 tcccgaagtt gtgcgcgtga tttttgaacg ccgcccgatg cgggaaaccg ccgttgccgt
    14161 ttcagacggc atcgggcatc ggcaggacga tttgtttgcc gaaacaccgt ccgccaatca
    14221 aacccaatcc gttccgctcc acaagcccta ccgcctgccg acccactgcc ccatctgccg
    14281 cagcgaaatc gaacgcgaag aaggcgaagc cgtcgcccga tgcagcggcg gtatgctttg
    14341 tcaggcacaa cgcgcgcaag gcttaatcca cttcgcctcg cgcaaagcga tggacatcga
    14401 cggcttgggt gaaaaacaaa tcgaacagct tgtcgcgcaa gacctcgtcc gccacttcgc
    14461 cgatctctac cgcctcgaca tcccgacctt gcaaaaaatg aaggaaacag cggacaaaac
    14521 cgttgccgaa tcggatcaaa tgccgtctga aggcagttcg gtcggcgcgt cgggcaaaca
    14581 taaaaaacaa ccagtcaagt gggcggaaaa catcctcgca ggcatagaag ccagcaaaac
    14641 gcccgaactc gcccgcttcc tgttcgcgct cggcatccgc cacgtcggcg aacgcaccgc
    14701 caaaacgctg gcacaggcat tcggcacatt ggaacgcgtc cgccgcgccc ccgaacccgt
    14761 cctcgcctgc ctgcccgaca tcggtacggt agtggcgcgt tccattgccc acttcttcgc
    14821 ccaagccgaa cagcaggcga tgatagacga actgctcgcc gcaggcgttg ccccgcaaac
    14881 ccaagccgtt accatcccgc ccgcccgcca cgccgaaccg caacgctgga tcgcccgcct
    14941 gcccggtttc aaaatcagcg aaaacaaagc ccaagcctta tgggaactcg ccggcaaaaa
    15001 catagaaggg ctgcaaaccg acaaagccct ccccaccgac tggcaggcgt ggcgcagcga
    15061 accacaaaac gccgccctgc tcgaaaacct gaaaaccttc ttcgcgcaaa tgccgtctga
    15121 agacgaggcg gcgcaaggtt cagacggcat caataaagcc gtggcgggca aaaccttcgt
    15181 gttaaccggc accctgccca ccctcaaacg cgaccaagcc caatccctaa tcgaagccgc
    15241 aggcggcaaa gtttccggca gcgtgtccaa aaaaaccgat tacgtcgtcg ccggagaagc
    15301 cgcgggcagc aagctggaaa aagccaatgc cttgggcgtt tccgtcctca gcgaagccga
    15361 actgcttacc ctgctcggct gaacccatgc cgtctgaacc gccttcagac ggcattgccc
    15421 acttttccga accacaccat gcacaccatt tcctttccaa accgcacccg actcaccgcc
    15481 ctgccgcccc tgtcgcttta catccacatc ccgtggtgca tcaaaaaatg cccgtattgc
    15541 gacttcaatt cccacagcct gaaaaacgga ttgcccgaag ccgcctatat cgacgcgctg
    15601 ctgaccgatt tgcagcttga attgcccaat atttggggca ggccggtgga aacgatcttt
    15661 ttcggcggcg gtacgcccag cctgtttcag gcggaatcga ttgaccgttt gttaagcggc
    15721 gtgcgttcgc tgttgcgctt gcagccggaa gcggaaatta ccttggaagc caatccgggg
    15781 acatttgaaa tcgagaagtt tcaaggattt aaagacgcgg gtattacgcg gctttctatc
    15841 ggcgtacaga gtttcaacga cgatatgctc tcaaggctgg ggcgcgtcca caacggtaag
    15901 gaagccttaa ccgctatcga taccgccttg aaattatttg ataaagtcaa tatcgacttg
    15961 atgtatgccc tgccgaacca aaccgttcag acggcattgg acgacgtaca aaccgctatc
    16021 gctacgggcg cgacccacat cagcgcgtat catctgacga tggaaccgaa cacgccgttc
    16081 ggtcatacgc cgccgaaagg tttgccgcaa gacgaagccg ccctcgacat cgaagacgcg
    16141 gtacacggcg cgctggaagg cgcgggtttt gtccactacg aaacatcggc ttttgcgaaa
    16201 ccagccatgc agtgccgcca caatttgaac tactggcagt tcggcgatta tttaggcata
    16261 ggcgcgggcg cgcacggcaa aatttcctat cccgaccgca tcgagcgcac cgtccgccgc
    16321 cgccacccca acgactacct cgccttaatg caaagccaac cgagtgaagc cgtcgaacgc
    16381 aaaaccgtcg ctgccgaaga tttgccgttc gaattcatga tgaacgccct gcgcctgacc
    16441 gacggcgtac ccgccgcgat gttgcaggag cgcacgggcg taccgagtgc caaaatcatg
    16501 gcgcaaatcg aaacggcaag gcaaaaaggc ctgctggaaa ccgaccctgc cgtattccgc
    16561 ccgaccgaaa aaggacgctt gtttttaaac gatttgctgc agtgtttttt atagtggatt
    16621 aacaaaaacc
//
LOCUS       DAWGKF010000031        16542 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.031, whole genome shotgun sequence.
ACCESSION   DAWGKF010000031 DAWGKF010000000
VERSION     DAWGKF010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16542)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16542)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16542
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.031"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            118..1293
                     /locus_tag="WHR07_000709"
     CDS             118..1293
                     /locus_tag="WHR07_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS aminotransferase family
                     protein"
                     /protein_id="HEZ2129952.1"
                     /translation="MLNTFLSPWPCFTQEEADAVSKVLLSNKVNYWTGNECREFEKEF
                     AAFAGTRYAVALANGTLALDVALKAIGIGAGNDVIVTSRTFLASASCIVNAGANPVFA
                     DVDLNSQNISAETIKAALTSNTKAIIVVHLAGMPAEMDGIMDLAKEHDLWVIEDCAQA
                     HGAKYKGKSVGSIGHVGAWSFCQDKIMTTGGEGGMVTTNDKTLWEKMWSYKDHGKSYD
                     AVYHREHAPGFRWLHESFGTNWRMMEMQAAIGRIQLKRLPEWTACRQAHAAKLAESLG
                     KFKSIRLVEVADYIGHAQYKFYAFVKPEHLKDGWTRDRIVSELNARKVPCYQGSCSEV
                     YLEKSFDDTPWRPKERLKNAVELGDTSLMFLVHPTLTDDEIAFCKEHIEAVLAEATR"
     gene            1341..3251
                     /gene="pglD"
                     /locus_tag="WHR07_000710"
     CDS             1341..3251
                     /gene="pglD"
                     /locus_tag="WHR07_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent dehydratase PglD"
                     /protein_id="HEZ2129953.1"
                     /translation="MTLETLIALPRNIKKICFLIHDFLMIFIAFWFTQSLKADYSDEW
                     FDFANWQSFLLTALLTITLFIRMGLYRAVTRFVSFRILSTALAGSIVSAVLFFLNTLI
                     FEERLRLALPIVYFLLLFVSVTGSRMVLRGLLSEHPKKQMIPVIIYGAGRSGRQLLEV
                     VKQMREYSAAAFVDDDPKLWHTVICGLAVYRPDDISALIERYGVEKILLAIPSATQEQ
                     RRRIINKLEAYPCEVLTIPGMKDLMDGKISIGTLKKISVSDLLGRDSVAPDNRLMSAD
                     IEGKTVMVTGAGGSIGSELCRQIIRRRPEKLLLFELSEFALYAIEKELRETCIQKRLN
                     TEILPFLGSVQNRTLLEHVMTAFSVATVYHAAAYKHVPMVEFNTVEGIRNNIFGTLEC
                     ALAATASGVETFVLISTDKAVRPTNTMGAGKRMAELCLQALAAEPGQKTRFSMVRFGN
                     VLGSSGSVVPLFEKQIAEGGPLTLTHPEITRYFMTIPEAAQLVIQAGAMGTGGDVFVL
                     DMGESVKIIDLARQMITLSGLKPNTPEQPDGDIEILITGLRPGEKLYEELLIGDNVRK
                     TAHPRIMTADEAMLPWHELSVLLDRIRAACDRYDQQAIRTLLINAPTGFTPSDGICDL
                     LWVRETHRKNAV"
     gene            3307..4599
                     /locus_tag="WHR07_000711"
     CDS             3307..4599
                     /locus_tag="WHR07_000711"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HEZ2129954.1"
                     /translation="MQFSAFGEKFTQHSGILQLMDDLGDALKSDKPVNMLGGGNPARI
                     PEIDQAFADIFSKLAAEHAVENIGNYSNPQGDAVLIDALTAFLNREYSWNLTADNIAL
                     TNGSQNAFFYLFNLFGGKFKLSDGTSAEKAILLPLAPEYIGYADVHVEGQHFVSVKPK
                     IENVEHEGEAGFFKYRVDFDALENLPELKEGKIGAICCSRPTNPTGNVLTDSEMARLD
                     ALAREHGIPLIIDNAYGMPFPNIIYSDVTLNWHENIILCFSLSKVGLPGVRTGIIVAA
                     PEVVKAVSSLNAIVNLAPTRFGAAIAAPLLESGEMKRLADQVIRPFYRNQAQTAVSLL
                     KRELGAYPMKIHKPEGAIFLWLWFENLPVSSQTLYEMLKAEGTLIIPGEHFFVGIDTQ
                     DYPHAGECIRMSIAQDAQTLEKGIAAIGKTVRKLYDNV"
     gene            complement(4651..5487)
                     /locus_tag="WHR07_000712"
     CDS             complement(4651..5487)
                     /locus_tag="WHR07_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HEZ2129955.1"
                     /translation="MIDLHCHSIVSDGMLSPAEVVRLAHQNGCTLLALTDHDHTGGIA
                     EARAEADRLGLRLINGVEISVTWRGRTIHVVGLDFDEQDENLQNLLAQVRQGRLKRLE
                     AIAAKLEKRGISGAYDGALALAANKEMVSRTHVAEFLIRVGHVKNKQQAFTKYLGDGK
                     SCAVRHEWATLEDCVSAVNGAGGLAVIAHPMRYDLSATAKRNLFEEFKKLGGAGIEVH
                     SGNCCKNDRLNYALLAERFGLLASAGSDFHRLNDFSGGILGACPELPENCKPVWTHFS
                     RH"
     gene            complement(5797..6198)
                     /locus_tag="WHR07_000713"
     CDS             complement(5797..6198)
                     /locus_tag="WHR07_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129956.1"
                     /translation="MAIYDLNEIVTSAALGMYKGKWQNMDFEQVLQDIVQETDFTYSW
                     EYGENWAIFCLNEKSVGMLCKQIPFAIIENEKLSQKIYQEYPWILTQQVYHFDTDKIL
                     LNKYVCKLTIGIMSAISQEPISLQDLYVDTV"
     gene            complement(6303..6506)
                     /locus_tag="WHR07_000714"
     CDS             complement(6303..6506)
                     /locus_tag="WHR07_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129957.1"
                     /translation="MDTTLKNKAEAILGEPLLDEPIRPESWECCGSDCGEACIQTIYW
                     ADKARYDAQRRKLKEAGWSDDAV"
     gene            complement(6484..6717)
                     /locus_tag="WHR07_000715"
     CDS             complement(6484..6717)
                     /locus_tag="WHR07_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEZ2129958.1"
                     /translation="MEATVYLEDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVLRNG
                     ETETRKTAKIRGGEVIEFDGARLEIADGYDPEE"
     gene            6883..10317
                     /gene="dnaE"
                     /locus_tag="WHR07_000716"
     CDS             6883..10317
                     /gene="dnaE"
                     /locus_tag="WHR07_000716"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEZ2129959.1"
                     /translation="MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDL
                     MNEFGLVKFYKACRSAGIKPVGAADVWIGNPDAPDKPFRAMLIIRNDAGYLRLSELLT
                     AAYVGKDRNVHHAELNPEWLENGDNSGLICLSGAHYGEVGVNLLNGNEDAARAAALKY
                     AAWFPDAFYLELQRLPERPEWEACVSGSVKLVEELGLPVVATHPTQFMSRDDFNAHEA
                     RVCIAGGWVLTDKKRPRDFTPSQFFIPPETMAERFADLPEALENTVEIAKRCNLHITL
                     GKNFLPLFPTPDGLSLDDYLIKLSNEGLQERMVQLYPDEAERAEKMPEYQERLDFELN
                     IIIQMKFPGYFLIVQDFINWAKTHGCPVGPGRGSGAGSLVAYSLKITDLDPLKYALLF
                     ERFLNPERVSMPDFDVDFCQANRGRVIEYVREKYGAEAVSQIVTFGTMSSKAVIRDVG
                     RVLELPFMLCDKLSKLIPLEANKPLGLDDAMKAEPQIQELIEAEEADELITLAKKLED
                     LTRGLGMHAGGVLIAPGKISDYSPVYQADESASPVSMYDKGDVEDVGLVKFDFLGLRN
                     LTIIEMAQNNIKNTTGDIIDVGKIPLDDQVAYQIFRDANTTAVFQFESTGMKKMLKTA
                     HTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQYIHPLLEGILAPTYGIMVYQEQ
                     VMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIFAEGAAKQGISREKSDEIFNY
                     MEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATMSSELDNTDQLKHFYDDCR
                     ANGIEFLPPDINESDYRFTPYPNMKIRYALGAIKGTGEAAVESITAARQSGGKFTGLL
                     DFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMDNADQKAANANQGGL
                     FDMMEDAIEPVRLIDAPMWSESEKLAEEKTVIGFYLSGHPFGPYAQEVRQIAPQKLSK
                     LKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDLSGQVEIMVGGQTLENCADCLKADQ
                     VLIIESKVSRDDYGGGDGLRILANQVMTLQTARERYARSLSLALAPHHDIGGLVQLLA
                     AHQLPDTPRIPLQLSYANEKASGRLQVPPKWTVTPSSALFGELETLLGSRSVRVNW"
     gene            10465..10614
                     /locus_tag="WHR07_000717"
     CDS             10465..10614
                     /locus_tag="WHR07_000717"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129960.1"
                     /translation="MHDTDSTKGKNGIFQSIGIKTALSLQKYQIDKPGKEIRPCRLKK
                     RPPVR"
     gene            complement(10751..11683)
                     /locus_tag="WHR07_000718"
     CDS             complement(10751..11683)
                     /locus_tag="WHR07_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEZ2129961.1"
                     /translation="MLSQLEYGIAKENRPNRQADRFAGSVLPLAASLTHKPNIMKPIP
                     TDTFQPAILPQAFETEIKSTCTGRIYRIQTATLGEMPSEGYPVLFVLDGEAFFPALFN
                     IMQSLMPNPVTRSNAPCLIVGIGYTTGSVRDLAQRAADYTPPLGDNATADERQQFGQA
                     DRFAAFIDSELTAFLESRYTLNRNETAVFGHSFGALFGLYSLLSHRRFRRHWLVSPSI
                     WWHNRRILDFMPSENRLNGIDVCLNIGALERGSDCKRREERDMAGQAEQMAAELDRHG
                     AAVFFREYPNADHGNVPFYSLTDCVEYLRKAWQR"
     gene            complement(11753..13909)
                     /locus_tag="WHR07_000719"
     CDS             complement(11753..13909)
                     /locus_tag="WHR07_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HEZ2129962.1"
                     /translation="MSVFRINMTAATVLAALSSSVFAAQTADLETVHIKGQRSYNAIA
                     TEKNGDYSSFAATVGTKIPASLREIPQSVSIITNQQVKDRNVDTFDQLARKTPGLRVL
                     SNDDGRSSVYARGYEYSEYNIDGLPAQMQSINGTLPNLFAFDRVEVMRGPSGLFDSSG
                     EMGGIVNLVCKRPAKAFQGHAAAGFGTHKQYKAEADVSGSLNSDGSVRGRVMAQTVGA
                     SPRPAEKNNRHETFYAAADWDINPDTVLGAGYLYQQRHLAPYNGLPADANNKLPSLPQ
                     HVFVGADWNKFKMNSHDVFADLKHYFGNGGYGKVGMRYSDRDADSNYAFAGSKLGMKT
                     LAGRPGCNTADDKACAVGLGTEIKQKALAFDASYSRPFRLGNTANEFVIGADYNRFRS
                     TNEQGRTTLYARGGLALNEFRSIPQVDLIANARKGVRGYSHTVATENLDEFGIYGKST
                     FHPADGLSLIGGGRLGHYKIELGEGKTLHKASKTKFTGYAGAVYDLNDNNSLYLSLSQ
                     LYTPQTNLDADGKLLKPRQGNQFEVGYKGSYMDDRLNARVSFYRMKDKNAAAPLNPNN
                     KKTRYAALGKRVMEGVETEISGAVTPKWQIHAGYSYLHSQIKTASNSRDDGIFLLMPK
                     HSANLWTTYQVTPELTIGGGVNAMSGITSSAGMHAGGYATFDAMAAYRFTPKLKLQIN
                     ADNIFNRHYYARVGGANTFNIPGSERSLTANLRYSF"
     gene            14069..14728
                     /locus_tag="WHR07_000720"
     CDS             14069..14728
                     /locus_tag="WHR07_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEZ2129963.1"
                     /translation="MTTPKLIIFDWDGTLADTTQPIIDTMRRSFAECGFPPPEAERVR
                     SLIGYSLPEIIRDLLEMPSETAVADIARTYSAHYLNPNNRNMTLFPDALPCLDKLKAQ
                     GFRLAVATGKGRAGLDNAISQTATGGYWLATACAGEYPSKPSPEMVFGICGELGFDPK
                     EALVVGDTSHDLHMAANAGAAAVGVATGAHSREQLLSAPHLAVLDGLSELPGFLARHY
                     A"
     gene            complement(14815..15783)
                     /gene="ispH"
                     /locus_tag="WHR07_000721"
                     /gene_synonym="lytB"
     CDS             complement(14815..15783)
                     /gene="ispH"
                     /locus_tag="WHR07_000721"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEZ2129964.1"
                     /translation="MNEKTIILANPRGFCAGVDRAISIVERALEEFGAPIYVRHEVVH
                     NKFVVDNLREKGAVFIEDLAEVPPGATLVYSAHGVSKAVRQEAAERGFRVFDATCPLV
                     TKVHKEVARLDAQDCEIIMIGHKGHVEVEGTMGQLAPGKMLLVETVGDVAKLEVRNPD
                     KLAYVSQTTLSVDETKDIIAALNARFPNIRNPHKEDICYATTNRQTAVKELAEQCDIV
                     IVVGSPNSSNSNRLREVAASRGIDAYMVDNAGYLQRAWFEGKNKVGVTAGASAPEVLV
                     REVLATIRGWGHETVREGEGAEESIVFVLPKELRREGETKPNLCKR"
     gene            complement(15812..16309)
                     /locus_tag="WHR07_000722"
     CDS             complement(15812..16309)
                     /locus_tag="WHR07_000722"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HEZ2129965.1"
                     /translation="MSSSVSSKTRYWVLALAAIVLDQWSKWAVLSSFQYRERVNVIPS
                     FFDLTLVYNPGAAFSFLADQGGWQKYFFLVLAVAVSAYLVRAILRDEFATLGKTGAAM
                     IIGGALGNVIDRLIHGHVVDFLLFYWQNWFYPAFNIADSFICVGAVLAVLDNIVHRKT
                     QEEKY"
BASE COUNT         3811 a         4776 c         4294 g         3661 t
ORIGIN      
        1 ccccgtacag accgattttg acaacacctg cggcgcgcgc ccgattcttc ggaacacgcc
       61 ccccttcaga cggcataggg tcggaaatgc cgtctgaaaa ccgacggaca aaccatcatg
      121 ctgaacactt tcctttcccc gtggccctgc ttcacccaag aagaagccga tgccgtttcc
      181 aaagtcctgc tgtccaacaa agtcaactac tggacgggca acgaatgccg cgaatttgaa
      241 aaagaatttg ccgcctttgc cggcacgcgg tacgccgtcg cccttgccaa cggcacgctg
      301 gcactcgatg tcgcgctcaa agcaatcggc ataggcgcgg gcaacgatgt gattgttacc
      361 tcgcgcactt tcttggcttc cgcttcctgc attgtgaacg cgggcgcaaa tcccgtgttt
      421 gccgatgtgg atttgaacag ccaaaacatc agcgccgaaa ctatcaaagc cgcgctgacg
      481 tcgaatacca aagccatcat cgtcgtccac ctcgccggta tgcccgccga aatggacggc
      541 atcatggact tggcaaaaga acatgatttg tgggtcatcg aagactgcgc ccaagcgcac
      601 ggcgcgaaat acaaaggcaa atccgtcggc agcatcggac acgtcggcgc atggtcgttc
      661 tgccaagaca aaatcatgac cacgggcggc gaaggcggca tggttacgac caacgacaaa
      721 accctgtggg aaaaaatgtg gtcgtacaaa gaccacggca aaagctacga tgccgtgtac
      781 caccgcgaac acgcgcccgg tttccgctgg ctgcacgaaa gtttcggcac aaactggcgt
      841 atgatggaaa tgcaggcggc aatcgggcgc atccagctca aacgcctgcc cgaatggact
      901 gcctgccgtc aagcgcacgc cgccaagctg gcggaaagcc taggcaaatt caaaagtatc
      961 cgcttggttg aagtcgccga ctacatcgga cacgcgcaat ataagttcta cgctttcgtc
     1021 aaacccgaac acctcaaaga cggctggacg cgcgaccgca tcgtcagcga actgaacgcg
     1081 cgcaaagtcc cctgctatca aggcagctgc tccgaagtct atttggaaaa atctttcgac
     1141 gacacgcctt ggcggccgaa agagcgtttg aaaaatgctg tcgaactggg cgacaccagc
     1201 ctgatgttct tggtgcaccc gacgctgacc gacgacgaaa tcgcgttctg caaagaacac
     1261 atcgaagccg tattggcaga agccacacga taaccattca gacggcatat gccgtctgaa
     1321 aaatacacgc cgccgacaac atgactctgg aaaccctgat cgccctgccg cgcaacatca
     1381 agaaaatctg tttcctcata cacgattttc tgatgatttt cattgccttt tggttcaccc
     1441 aaagcctaaa ggccgactac tcggacgaat ggttcgattt tgccaactgg cagtcttttt
     1501 tgctgactgc cttgctgacc atcacattat ttatccgaat ggggctttac cgcgccgtta
     1561 cacgcttcgt cagcttccgc atcctctcca ccgcgctggc aggcagcatt gtttccgccg
     1621 tcctgttctt cctcaacaca ttgatttttg aagaaaggct gcgcctcgcc ctgccgattg
     1681 tctatttctt actgctgttt gtttccgtga ccggctcgcg tatggttttg cgcggactgt
     1741 tgtccgaaca ccccaaaaaa cagatgatcc ccgtcattat ttacggcgcg gggcgttcgg
     1801 gcagacagct tctcgaggtc gtcaaacaaa tgcgcgaata ttccgccgcc gcctttgtgg
     1861 acgacgaccc caaactgtgg cacaccgtca tctgcggcct tgccgtttac cgccccgacg
     1921 acatctccgc cctcatcgaa cgctacggcg tggaaaaaat cctgcttgcc attcccagcg
     1981 cgactcagga acaacgccgc cgaatcatca acaaactgga agcctatccc tgcgaagtgt
     2041 tgaccattcc cggaatgaaa gacctgatgg acgggaaaat cagcatcggc acgctcaaaa
     2101 aaatctccgt gtccgacctg ctcgggcgtg attccgtcgc gcccgacaac cgcctcatga
     2161 gtgccgacat cgaaggcaaa accgtcatgg taaccggcgc gggcggctcc atcggttcgg
     2221 aactctgccg ccagattatc cgccgccgcc ccgaaaagct gctgctgttc gagttatccg
     2281 aattcgccct gtacgccatc gaaaaagaat tgcgcgaaac ctgcatccaa aaacgcctca
     2341 acaccgaaat cctgcccttt ctcggttcgg tgcaaaaccg caccctgctc gaacacgtca
     2401 tgaccgcctt ttccgttgcg accgtctatc acgccgccgc ctacaaacac gtccccatgg
     2461 tcgaattcaa caccgtcgaa ggcatacgca acaacatctt cggcacactc gaatgcgcgc
     2521 ttgccgccac ggcttcgggc gtggaaacct tcgtcctcat ctccaccgac aaagccgtcc
     2581 gccccaccaa cacgatgggc gcgggcaaac gcatggcgga actctgcctt caggcactcg
     2641 ccgccgaacc cggacaaaaa acccgcttca gcatggtacg tttcggcaat gttttaggtt
     2701 cgtccggctc cgttgtcccg ctgtttgaaa aacagattgc agaaggcggc ccgcttaccc
     2761 tgacccaccc cgaaatcaca cgttatttca tgaccatacc cgaagccgcc caactcgtca
     2821 tacaggcagg cgcgatgggt acgggcggcg acgtattcgt cctcgacatg ggtgaatccg
     2881 tcaaaatcat cgaccttgcc cgccaaatga ttaccctaag cggcctcaaa cccaacacac
     2941 ccgaacaacc cgacggcgac atcgaaatcc tcattaccgg actgcgtccc ggcgaaaaac
     3001 tctacgaaga gctgctcatc ggcgacaacg tccgcaaaac cgcccatccg cgcattatga
     3061 cggctgacga ggcgatgctg ccgtggcacg agctctctgt cctgctcgac cgcatccgtg
     3121 cggcctgcga ccgttacgac cagcaggcaa tccgcaccct gctcatcaac gccccgaccg
     3181 gctttacccc aagcgacggt atctgcgacc tgctttgggt acgagaaaca cacagaaaaa
     3241 atgccgtctg aaccttcaga cggcataacg tacaaaccaa cctaccttac acacacggag
     3301 tttgacatgc agttttcagc attcggcgaa aaattcacgc aacacagcgg catcctccaa
     3361 ctgatggacg acctcggcga cgcgctcaaa agcgacaagc ccgtcaacat gctcggcggc
     3421 ggcaacccgg cgcgcattcc ggaaatcgat caggcgttcg ccgacatatt ctccaaactg
     3481 gcggcagaac acgccgtcga aaacatcggc aactactcca atccccaagg cgatgccgtg
     3541 ctgattgacg cgctgaccgc cttcctcaac cgcgaataca gctggaatct gaccgccgac
     3601 aatatcgcgc tgaccaacgg ttcgcaaaac gcgtttttct atttattcaa cctcttcggc
     3661 ggcaaattca agctttcaga cggcacatcc gcagaaaaag ccattttgtt gccgctcgcg
     3721 cccgaataca tcggctatgc cgacgtgcat gtcgaagggc agcacttcgt ttccgtcaag
     3781 cccaaaatcg aaaacgtcga acacgaaggc gaagcaggct tcttcaaata ccgcgtggac
     3841 tttgacgcac tggaaaacct gcccgaactg aaagaaggca aaatcggcgc gatttgctgt
     3901 tcgcgcccga ccaacccgac cggcaacgtg ctgaccgaca gcgaaatggc gcggctggac
     3961 gctttggcgc gtgaacacgg gattccgctg attatcgaca acgcctacgg aatgccgttc
     4021 cccaacatca tttacagcga cgtgacgctg aattggcacg aaaacatcat cctctgcttc
     4081 agcctttcca aagtcggcct gccgggcgtt cgcaccggca tcatcgtcgc cgcgcccgaa
     4141 gtcgtcaaag ccgtcagcag cctgaacgcg attgtaaacc ttgcccccac acgcttcggc
     4201 gcggccatcg ccgccccgct actggaaagc ggcgagatga aacggcttgc cgaccaagtc
     4261 atccggccgt tttaccgcaa tcaggcgcaa accgccgtct cgctgctcaa gcgcgagctg
     4321 ggcgcgtacc cgatgaaaat ccacaaaccc gaaggcgcga ttttcctgtg gctctggttt
     4381 gaaaacctgc ccgtttcttc gcaaaccctg tacgaaatgc tcaaagccga aggtacgctg
     4441 attattccgg gcgaacattt cttcgtcggc atcgacacgc aggattaccc gcacgcgggc
     4501 gagtgcatcc gcatgagcat cgcgcaggac gctcaaacgc tggaaaaagg cattgccgcc
     4561 atcggcaaaa ccgtccgaaa actgtacgac aacgtttaaa ccgcaaaaaa tgccgtctga
     4621 aaagttttca gacggcattt ttatccgcat tcaatgtcgg gaaaagtgcg tccacaccgg
     4681 tttgcagttt tccggcagtt cgggacacgc gccgagaatg ccgccgctga agtcgtttaa
     4741 acggtggaag tcgctgcccg cgcttgccaa caatccgaag cgttctgcca aaagcgcgta
     4801 gttgaggcgg tcgtttttgc aacagtttcc gctgtggact tcgatacccg caccgccgag
     4861 ttttttaaat tcttcaaaca gattgcgctt ggcggtggcg gacaaatcat aacgcatcgg
     4921 atgggcgatg accgccaacc cgcccgcgcc gttgacggcg gagacgcagt cttccagcgt
     4981 cgcccattcg tggcggacgg cgcaggattt gccgtcgccc aagtatttgg tgaacgcctg
     5041 ctgcttgttt ttgacgtgtc ccacccgaat gaggaactcg gcgacgtgtg tgcggctgac
     5101 catttctttg tttgccgcca gcgcgagcgc gccgtcgtat gcgcccgaaa tgccgcgttt
     5161 ttccagcttg gcggcgatgg cttcgaggcg tttcagacgg ccttgccgca cttgcgccaa
     5221 caggttttgc aggttttcgt cttgttcgtc aaagtctaag ccgacaacgt gtatggtacg
     5281 cccgcgccac gttacggaga tttccacgcc gttaatcagg cgcaaaccga gcctgtcggc
     5341 ttcggcacgc gcttcggcga tgccgccggt gtggtcgtgg tcggtcaacg ccagcagcgt
     5401 gcagccgttt tgatgcgcga ggcgcacgac ttcggcgggg gaaagcatac cgtcggaaac
     5461 gatggaatgg cagtgcaggt ctatcatggg gtgttatgtg tgtggtgaat gaaggtcggg
     5521 atgtttcaat gttgttgggc agtgtggcgg cggcggtcat tttaaaaaac aggtgtatgg
     5581 caaatgcaaa ggaaaagccg ctatgccgtc attcccaacc cccaaatgta cggatagagc
     5641 cagtagggat gggtacatta tttgtttgca ttattagtta tcctgctgta tccattaaat
     5701 catatgcttc aattaattgt tgttctagct cttgtaccaa ttttggattg cgaattccta
     5761 acgcaatttc aaacagcgag ttctcactat gtacatctac acagtatcta cataaagatc
     5821 ttgtaaagat ataggttctt ggctgatggc actcattatt ccaatagtta atttgcatac
     5881 atatttgttt aataaaattt tatctgtatc aaaatgataa acttgttgag ttagtatcca
     5941 agggtattct tggtatattt tctgtgataa tttttcattc tctataatcg cgaaaggtat
     6001 ctgtttacat aacataccaa cagacttttc gtttagacag aaaatagccc aattttcccc
     6061 atattcccaa gagtatgtaa aatctgtttc ctgaacaata tcttgtaaaa cttgctcaaa
     6121 atccatgttt tgccatttac ctttatacat acctaatgcg gcactggtta ctatttcgtt
     6181 taagtcataa atagccattt atgttccttg ctaatttcta ggtgagacat gtataggact
     6241 gagaccagta tgcccattag gttcccctct atacacatta atagtagatg ttggttccgt
     6301 tttcagacgg catcgtccga ccaacccgct tctttcaatt tccgccgttg cgcgtcgtag
     6361 cgggccttat ccgcccaata aatcgtctga atgcacgcct cgccgcagtc gctgccgcaa
     6421 cattcccacg actcggggcg gataggttcg tctaaaagcg gttcgcccaa gatggcttcg
     6481 gctttattct tcagggtcgt atccatcggc aatttccaag cgtgcgccgt caaattcaat
     6541 cacttcgccg ccgcgtattt tggcggtttt acgggtttcg gtttcgccgt tgcgcaacac
     6601 cagcccttcg gcgataaacg cttttgcctg tccgccgctt tcagcaagac cggccagttt
     6661 caacaggtcg cataaagcga tgtattcatt atcttcaaga tagactgttg cttccatcat
     6721 tcaatccttt tcaataaggg cgatatttta acatggccgt ctgaaagaaa gcccccttct
     6781 gtttgatttg ctttatccaa ccccattaca tttgattttc agacggcctt tagctgccaa
     6841 ccctgctaca atacgccttt tattgttcac gccgattttg ccatgaccga gccgacctac
     6901 atccccctgc gcctgcatac cgaattttcg attaccgacg gtatggtgcg gattaaaaaa
     6961 ctgattgcca aagcgcagga atacggtttg cctgctttgg gcatcagcga tttgatgaac
     7021 gaattcggtt tggtgaaatt ttataaagcc tgccgcagcg cggggattaa gcccgtcggc
     7081 gcggcggacg tatggatagg caatccggat gcgcccgaca agccgttccg tgctatgctg
     7141 attatccgca acgatgcggg ctatctgcgc ttgagcgagc ttttgacggc ggcttatgtc
     7201 ggcaaagacc gcaatgtcca tcatgcggaa ctcaatcccg aatggctgga aaacggcgac
     7261 aacagcggct tgatttgttt gagcggcgcg cattacggcg aagtgggcgt gaatctcttg
     7321 aacggcaacg aagacgcggc gcgggcggcg gcgttgaaat atgcggcgtg gtttcccgat
     7381 gcgttttatc tggagttgca acgcctgccc gagcgtcccg aatgggaggc ttgcgtttcg
     7441 ggcagcgtga agctggtgga ggaactgggt ttgccggtgg tggcgacgca tccgacgcag
     7501 tttatgagcc gcgacgattt caacgcgcac gaggcgcggg tgtgtatcgc aggcggctgg
     7561 gtattgacgg acaagaaacg tccgcgcgat ttcacaccga gccagttttt cattccgccg
     7621 gaaacgatgg ccgaacgttt cgccgattta cccgaagccc tcgaaaacac ggtggaaatt
     7681 gccaaacgct gcaatctgca catcacattg ggcaaaaact tcctgcccct tttccccacg
     7741 cccgacggtt tatcactcga tgactatctc atcaaactct ccaatgaggg cttgcaggaa
     7801 cgcatggttc agctttatcc cgacgaggcg gagcgtgcgg aaaaaatgcc ggaatatcag
     7861 gaacgtttgg attttgagct gaacatcatc atccagatga aattccccgg ctatttcctt
     7921 atcgtacaag actttatcaa ctgggcgaaa acacacggct gcccggtcgg gccgggacgc
     7981 ggttcgggcg cgggttcgct ggtggcgtat tcgctgaaga ttaccgacct cgatccgctg
     8041 aaatacgcgc tgctgttcga gcgtttccta aaccccgaac gcgtttctat gcccgacttc
     8101 gacgtggact tctgtcaggc aaaccgcggc cgcgtgattg aatatgtacg cgaaaaatac
     8161 ggtgcggaag cagtcagcca gattgttacc ttcggcacga tgtcgtccaa agcagtgatt
     8221 cgcgacgtgg ggcgcgtact ggaactgccg tttatgctgt gcgacaaact gtccaagctg
     8281 attccgttgg aagccaacaa acctttgggt ttggacgacg cgatgaaggc ggagccgcag
     8341 attcaggaat taatcgaagc ggaagaagcg gacgaactga ttacgctggc gaaaaagctg
     8401 gaagatttga cgcgcggttt gggtatgcac gcgggcggcg tgttgattgc gccgggcaag
     8461 atttccgatt acagccccgt gtatcaggcg gacgaatccg cctcgcccgt atccatgtac
     8521 gacaagggcg acgtggaaga cgtgggtttg gtgaaattcg actttttagg tctgcgcaac
     8581 ctgaccatca tcgaaatggc gcagaacaac atcaaaaaca ccaccggcga catcatcgat
     8641 gtcggcaaaa ttccgcttga cgaccaggtt gcctaccaaa tcttccgcga tgcgaacacc
     8701 accgccgtgt tccagttcga gtcgacaggc atgaagaaaa tgctgaaaac ggcgcatacg
     8761 accaagtttg aagaactgat tgccttcgta tcgctctacc gacccggccc gatggacaat
     8821 attcccgact tcgtcgcgcg tatgaaaggt caggaattcc aatacatcca cccgctactc
     8881 gaaggcatcc tcgcaccaac ctacgggatt atggtgtatc aggaacaagt gatgcaggcg
     8941 gcgcagatta tcggcggcta ctcgctcggc ggcgcggacc tgctgcgccg cgccatgggt
     9001 aagaaaaagc ccgaagaaat ggtgaaacac cgcgaaatct tcgccgaagg cgcggcaaaa
     9061 caaggcattt cgcgcgaaaa atccgacgaa atcttcaact acatggaaaa attcgccggc
     9121 tacggtttca acaaatccca cgctgccgcc tacgccctga tttcctacca gaccgcatgg
     9181 ctcaaagccc actaccccgc cgaatttatg gcggcgacca tgtcgtctga attggacaac
     9241 accgaccagc tcaagcattt ctacgacgac tgccgtgcca acggcatcga gttcctgccg
     9301 cccgacatca acgaatcaga ctaccgcttc acgccgtatc cgaacatgaa aatccgctac
     9361 gcgctcggcg cgattaaagg cacgggcgaa gccgccgtcg aatccatcac cgccgcgcgg
     9421 caaagcggcg gcaagtttac cggcctcttg gacttctgtg agcgcgtcgg caaagaacac
     9481 atgaaccgcc gcaccctcga agctctgata cgcggcggcg cattcgacag catcgaaccc
     9541 aaccgcgcca tgctcttggc gaacatcgac ctcgctatgg acaacgccga ccaaaaagcc
     9601 gccaacgcca atcagggcgg gcttttcgac atgatggaag acgccatcga accggtgcgg
     9661 ctcatcgacg cgccgatgtg gagcgaatcg gaaaaactcg ccgaagaaaa aaccgtcatc
     9721 ggcttttacc tgtccggcca cccgttcggc ccgtatgccc aagaagtccg ccaaatcgcc
     9781 ccgcagaaac tgtcgaaact caaaccgcaa gacagcgtgc gcctcgccgg attcgttacc
     9841 gccgtacgca ccatgatggg caagcgcggc aaaatcgcct tcgtcagcct tgaagatttg
     9901 agcggacagg ttgaaatcat ggtcggcggt cagacgttgg aaaactgcgc cgactgcctc
     9961 aaagccgacc aagtgctgat tatcgaatcc aaagtcagcc gcgacgacta cggcggcggc
    10021 gacggactgc gtattctggc aaaccaagtc atgaccctgc aaacggcacg cgaacgctac
    10081 gcccgcagcc tcagcctcgc cctcgccccg catcacgaca tcggcggact ggtacaactg
    10141 ctcgccgccc accaactgcc cgacacgccg cgcatcccgc tgcaactgtc gtatgccaac
    10201 gaaaaagcgt cgggcaggct tcaagtgccg ccgaaatgga cggttacacc gagctccgca
    10261 ttgttcggcg aactggaaac attgctcggc agccggtcgg tgcgcgtcaa ctggtaacca
    10321 aaaatagaaa tgccgtctga agcccaaaaa ccggtttcat tcgtacttta ttcgaatgat
    10381 tgaataaaag taactgccaa gaaaaacgta ttttttggtt atttcgccag tctaaataga
    10441 gcaaccggga cgattgatat ccgtgtgcat gacacagaca gcaccaaagg gaaaaacggc
    10501 attttccaaa gtatcggtat caaaaccgcc ctttcactcc aaaaatacca aatcgacaaa
    10561 ccgggcaaag aaatcagacc gtgccgcctg aaaaaacgcc cacccgtccg ttaaattaac
    10621 ctatccctgt ttcagacggc ctgaagcagg gatttttata tcaaaataaa atgagaaagg
    10681 gagcaataac ccttaggtag ctcttgttat tttccgatgc aaaacaaagc agtcatatat
    10741 ttaattcccc ctacctctgc caagccttcc tcaaatattc gacgcaatcg gtcagcgagt
    10801 agaacgggac attgccgtgg tcggcattcg gatattcccg gaaaaagacg gcggccccgt
    10861 gcctgtctaa ctctgccgcc atttgttcgg cctgccctgc catatcgcgt tcttccctgc
    10921 gtttacaatc gctaccccgt tctagcgcgc cgatgttgag gcagacatcg atgccgttta
    10981 gccggttttc agacggcata aagtcgagta tccgcctgtt gtgccaccaa atcgatgggg
    11041 atacgagcca atgccgtctg aaacggcggt gggaaagcag ggaatacagt ccgaacagtg
    11101 cgccgaacga gtgtccgaat acggcggttt cattgcggtt gagggtgtag cggctttcta
    11161 aaaaggcggt cagctcgctg tcgataaagg cggcgaagcg gtctgcctgt ccgaactgct
    11221 gccgttcgtc tgctgtggcg ttgtctccaa gcggcggcgt gtagtcggcg gcacgttgtg
    11281 ccaaatcgcg cacactgcct gtcgtgtagc cgataccgac aatcaggcag ggggcgttgc
    11341 ttcgggtaac ggggttgggc atcagcgact gcatgatgtt gaaaagtgcg gggaaaaagg
    11401 cttcgccgtc caaaacgaag aggacgggat agccttcaga cggcatttcg ccgagtgtcg
    11461 ccgtctgaat ccgatagatt cgccccgtgc aggtggattt gatttcggtt tcaaaggctt
    11521 ggggcagtat ggcaggttgg aatgtgtcgg tcggtatggg tttcatgatg ttcggcttgt
    11581 gggtcagact ggcggcaagc ggtaaaaccg aaccggcaaa gcggtctgcc tgccggttcg
    11641 gtctgttttc cttcgcaatg ccatactcca gttgtgagag catagggtat gcagcgcagc
    11701 ttgttgtggt ttgatgatgc tgcggctgcc gtttcagacg gcatattggt ctttaaaaac
    11761 tgtaacgcag gtttgccgtc aggctgcgct ccgaaccggg aatgttaaag gtgttcgcgc
    11821 cgccgacgcg ggcgtagtaa tggcggttga agatgttgtc ggcgttgatt tgcagcttca
    11881 gcttgggcgt gaagcggtat gccgccatcg catcgaacgt ggcataaccg cctgcatgca
    11941 tccctgcaga tgaagtaatg ccgctcatcg cgttcacgcc gccgccgatg gtcagctcgg
    12001 gcgtaacttg gtaagtcgtc cacaggtttg cgctgtgttt gggcatcaat aggaagatgc
    12061 cgtcgtcgcg tgaattggag gcggttttga tttggctgtg cagatagctg taacctgcat
    12121 ggatttgcca tttcggtgta accgcgccgc tgatttcggt ctcaacgcct tccatcacgc
    12181 gtttgcccaa tgcggcgtaa cgggtttttt tgttgttcgg gttcaacggt gcggcggcgt
    12241 ttttgtcttt catgcggtag aacgaaactc gggcattgag gcggtcgtcc atgtagctgc
    12301 ctttgtaacc gacttcaaac tggttgcctt ggcgcggttt gagcagcttg ccgtcggcat
    12361 cgaggttggt ttgcggtgtg tagagctggg acaggctcag gtagaggctg ttgttgtcgt
    12421 tcaagtcgta aaccgcgcct gcgtagccgg tgaacttggt tttgctggct ttgtgcaggg
    12481 ttttgccttc gcccaactcg attttatagt gtcccaaacg tccgccgccg ataagcgaca
    12541 gcccgtcggc aggatggaag gtggatttgc cgtaaatgcc gaattcgtcg aggttttcgg
    12601 tagcgacggt atggctgtaa ccgcgcacgc ctttgcgcgc gttggcaatc aaatcaacct
    12661 gcggtatgct gcggaactcg tttaaagcca ggccgccgcg tgcatataaa gtagtacggc
    12721 cttgttcgtt ggtgctgcgg aagcggttgt aatcggcgcc gatgacaaat tcgttggccg
    12781 tattgcccaa gcggaaaggc ctgctgtagc tggcgtcaaa cgcgagggct ttttgtttga
    12841 tttctgtacc caaacccacc gcgcaggctt tgtcgtcagc cgtattgcag cccgggcggc
    12901 ctgccagggt tttcatgccc agcttgctgc cggcaaaggc atagttggag tcggcatcgc
    12961 ggtcggaata gcgcataccg actttgccgt agccgccgtt gccgaagtaa tgtttcaaat
    13021 cggcaaacac gtcgtggctg ttcattttaa atttgttcca atccgcgccg acaaatacgt
    13081 gttgcggcag ggacggtaat ttgttattgg catcggctgg caagccgttg tacggcgcga
    13141 ggtggcgttg ctggtaaaga tagcccgcgc ccaaaaccgt atcggggttg atgtcccaat
    13201 ccgccgccgc gtagaaggtt tcgtgccggt tgtttttctc ggcgggacgc ggagacgcgc
    13261 cgacggtctg cgccatcacg cggccgcgca cgctgccgtc tgaattgagg ctgcccgata
    13321 cgtccgcctc ggctttatat tgtttgtgcg taccgaaccc tgccgcagca tgaccttgga
    13381 acgctttggc cgggcgtttg cacaccagat ttacgatgcc gcccatctcg ccgctgctgt
    13441 cgaacaagcc gctcggcccg cgcatcactt ccacacggtc gaaggcaaac agattgggca
    13501 gcgtgccgtt gatactctgc atctgcgcgg gcaggccgtc gatgttgtat tcgctgtatt
    13561 cgtaaccgcg cgcgtaaacc gaagagcgtc cgtcgtcgtt gctcaacacg cgcaggccgg
    13621 gcgttttgcg tgccaactgg tcaaacgtat caacattgcg gtctttgacc tgttgattgg
    13681 tgatgatgct gacagattgc ggaatttcgc gcaaagaagc ggggattttt gtgccgacgg
    13741 tggcggcaaa cgagctgtaa tcgccgtttt tctcggtggc aatcgcgttg tacgaacgct
    13801 gacccttaat atggacggtt tccaaatccg ccgtttgtgc ggcaaaaacc gaagacgaaa
    13861 gtgctgccaa aaccgtggcg gcggtcatat tgatgcggaa aactgacata aactgtccca
    13921 ttcacataaa tgataatggt tctattttaa taaagcacaa cgcggcttgt tcggaaaaac
    13981 atatcgcgca gccgacaaat tttgtcgaaa atgcgacacg tctgcgtttt ccgcataaaa
    14041 tctgactttt caccgtaaac aacctgccat gaccacgccc aaactcatca tcttcgactg
    14101 ggacggcacg cttgccgata cgacccaacc catcatcgac accatgcgcc gcagcttcgc
    14161 cgaatgcggt tttccgccgc ccgaagcgga acgcgtccgc agcctgattg gctacagcct
    14221 gcccgaaatc atccgcgacc tgctcgaaat gccgtctgaa accgccgttg ccgacatcgc
    14281 gcgcacttat tccgcacatt acctcaatcc caacaaccgc aatatgacgc tctttcccga
    14341 tgccctgccc tgtctggaca agctcaaagc acaaggcttc cggcttgccg tcgccacggg
    14401 caaagggcgg gcgggtttgg acaacgccat cagccaaacc gccaccggcg gctattggct
    14461 cgccaccgcc tgcgcggggg aatatccctc caaaccctcg cccgaaatgg tattcggaat
    14521 ctgcggcgaa ctggggttcg acccgaaaga ggcattggtc gtcggcgata cgtcgcatga
    14581 cctgcatatg gcggcaaacg caggcgcggc ggcagtcggc gtggccaccg gcgcacattc
    14641 gcgcgaacag ctccttagcg caccgcatct cgccgtattg gacggtttgt ccgaactgcc
    14701 cggttttctt gcacgacatt acgcctgatt ggtttccgca tccggcacgc ggcaaaaatg
    14761 ccgtctgaag cctgttcaga cggcatttgt gttgcccaaa cattcaacgc ttgctcaacg
    14821 tttgcacaaa ttgggtttgg tttcgccctc gcggcgcagc tctttgggca ggacgaacac
    14881 aatgctttct tccgcaccct cgccttcgcg tacggtttcg tgcccccatc cgcgtatggt
    14941 tgccagtact tcccgcacca acacttcggg cgcggacgcg cctgccgtta cgccgacttt
    15001 gtttttgccc tcaaaccatg cgcgttgcag gtagcctgca ttatccacca tatacgcatc
    15061 gattccgcgc gatgccgcca cttcgcgcaa gcggttgctg ttggacgaat tgggcgaacc
    15121 gaccacaatc acgatgtcgc actgttccgc cagctctttg acggcggttt gccggttggt
    15181 cgtcgcatag cagatgtctt ccttgtgcgg attgcggata ttggggaaac gcgcgttcag
    15241 cgcggcgatg atgtctttgg tttcatcgac cgagagcgtg gtttggctga cataggcgag
    15301 tttgtcgggg tttctgactt cgagttttgc cacatctccg accgtttcga ccaaaagcat
    15361 tttgcccggc gcaagctgcc ccatcgttcc ttcaacctcg acgtgcccct tatgcccgat
    15421 catgatgatt tcacagtctt gggcatccag tcgggcgact tccttatgca ctttcgtcac
    15481 cagcgggcaa gtcgcatcaa acacgcggaa accgcgctcc gccgcttctt gccgcaccgc
    15541 cttcgatacg ccgtgtgccg aataaaccag tgtcgcgccc ggcggcactt ccgccaagtc
    15601 ttcaataaac accgcacctt tttcacgcag gttgtccacg acgaatttgt tgtgaacgac
    15661 ttcgtggcgc acataaatcg gcgcgccgaa ctcttccaaa gcacgttcga caatactgat
    15721 tgcccgatcc acaccagcgc agaagccgcg cggattggca aggatgatgg ttttctcgtt
    15781 cataagcccg gtatttcgtt ttcagacggc atcaatattt ttcttcttgg gttttacggt
    15841 ggacgatgtt gtccaacacc gccaacaccg caccgacgca gataaagctg tcggcaatat
    15901 taaaggcggg ataaaaccaa ttttgccaat aaaacaataa gaaatcgacg acatgaccgt
    15961 gtatcaggcg gtcgatgaca ttgcctaacg caccgccgat aatcattgcc gcacccgttt
    16021 tgccgagggt tgcaaactca tcgcgcaaga tggcgcgtac caaatacgcg ctcaccgcca
    16081 ccgccagcac caaaaaaaag tatttttgcc agccgccctg atcggcaagg aagctgaacg
    16141 ccgcacccgg gttgtacacc agcgtcagat cgaaaaagga aggaatgaca ttgacgcgtt
    16201 cccgatactg aaacgacgac agcaccgccc acttcgacca ctggtccagc acgatggcgg
    16261 caagtgccaa tacccaatag cgcgttttac ttgaaacaga tgaagacata tttttcaaca
    16321 gccggtaaaa gagtaccatt ttacccgaaa accccctttc ctgtacccga aacggcaaat
    16381 gccgtaatct taaaacccgt cattcccgac aacaccgtaa tctcgaaacc cgtcattccc
    16441 gcgtaggcgg gaatccagac ctgtccgcac agaaacttat cggataaaaa cagttgccca
    16501 aaccccgcgt tctatagtgg attaaattca aaccagtacg gc
//
LOCUS       DAWGKF010000032        16536 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.032, whole genome shotgun sequence.
ACCESSION   DAWGKF010000032 DAWGKF010000000
VERSION     DAWGKF010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16536)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16536)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16536
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.032"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            208..1272
                     /locus_tag="WHR07_000723"
     CDS             208..1272
                     /locus_tag="WHR07_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-butanediol dehydrogenase"
                     /protein_id="HEZ2129966.1"
                     /translation="MKAARFYDKGDIRIEDIPEPTVAPGTVGINVAWCGICGTDLHEF
                     MEGPIFIPPCGHPHPISGESAPVTMGHEFSGVVYAVGEGVDDIKVGQHVVVEPYIIRD
                     DVPTGEGSNYHLSKDMNFIGLGGCGGGLSEKIAVKRRWVHPISDKIPLDQAALIEPLS
                     VGHHAYVRSGAKAGDVALVGGAGPIGLLLAAVLKAKGIKVIITELSKARKDKARESGV
                     ADYILDPSEVDVVEEVKKLTNGEGVDVAFECTSVNKVLDTLVEACKPAANLVIVSIWS
                     HPATVNVHSVVMKELDVRGTIAYCNDHAETIKLVEEGKINLEPFITQRIKLDELVSEG
                     FERLIHNNESAVKIIVSPNL"
     gene            1413..1736
                     /locus_tag="WHR07_000724"
     CDS             1413..1736
                     /locus_tag="WHR07_000724"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HEZ2129967.1"
                     /translation="MGDSVLSAIQQTITQRKSANPSESYVAQLLHKGEDKILKKVIEE
                     AGEVLMASKDKNPSHLVYEVADLWFHTMILLTHHDLKAEDVLDELARRQGLSGLAEKA
                     ARTES"
     gene            1808..2131
                     /locus_tag="WHR07_000725"
     CDS             1808..2131
                     /locus_tag="WHR07_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HEZ2129968.1"
                     /translation="MDNCIFCKIAAKDIPAQTVYEDGEMVCFKDINPAAPVHLLLIPK
                     VHFDSLAHAAPEHQPLLGKMMLKVPEIAKAAGLADGFKTLINTGKGGGQEVFHLHIHI
                     MGTPV"
     gene            2178..2381
                     /gene="tatA"
                     /locus_tag="WHR07_000726"
     CDS             2178..2381
                     /gene="tatA"
                     /locus_tag="WHR07_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HEZ2129969.1"
                     /translation="MGSFSLTHWIIVLIIVVLIFGTKKLRNVGKDLGGAVHDFKQGLN
                     EGTDGKEAQKDDVIEHKKDEDKA"
     gene            2385..3071
                     /gene="tatB"
                     /locus_tag="WHR07_000727"
     CDS             2385..3071
                     /gene="tatB"
                     /locus_tag="WHR07_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatB"
                     /protein_id="HEZ2129970.1"
                     /translation="MFDFGLGELVFVGIIALIVLGPERLPEAARTAGRLIGRLQRFVG
                     SVKQEFDTQIELEELRKAKQEFEAAAAQVRDSLKETGTDMQNSLHDISDGLKPWEKLP
                     EQRTPADFGVDENGNPFPDAANTLSDGISDVMPSERSDTSAEILGDSGQTGSTAEPAE
                     TDQDRAWREYLTASAAAPVVQTVEVSYIDTAVETPVPHTTSLRKQAISRKRGLRPKHR
                     AKPKLRVRKS"
     gene            3085..3855
                     /gene="tatC"
                     /locus_tag="WHR07_000728"
     CDS             3085..3855
                     /gene="tatC"
                     /locus_tag="WHR07_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEZ2129971.1"
                     /translation="MSETQNEQPVQPLVEHLIELRRRLMWTVVGILVCFFGLMPFAQQ
                     LYTFIADPLMANLPKDTSMIATDVIAPFFVPVKVTLMAAFLISLPHTLYQIWAFVAPA
                     LYQNEKRLITPLVLSSVSLFFIGMAFAYFLVFPVIFKFLASVTPVGVNMATDIDKYLS
                     FILGMFVAFGTTFEVPIVVILLTKIGVVTTEQLKRARPYVIVGAFVIAAIITPPDVIS
                     QTLLAIPLILLYEAGIWFGRFFTPRSEQDGDIQPPATT"
     gene            3908..4516
                     /gene="maf"
                     /locus_tag="WHR07_000729"
     CDS             3908..4516
                     /gene="maf"
                     /locus_tag="WHR07_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HEZ2129972.1"
                     /translation="MNTLYLGSNSPRRMEILTQLGYQVVKLPANIDETVRQNEDPARY
                     VQRMAEEKNRTALTLFCETNGTMPDFPLITADTCVVSDGIILGKPRSQAEAIEFLNRL
                     SGKQHTVLTAVCIHYRGKTSSRVQTNRVVFKPLSSEEISAYVQSGEPMDKAGAYAVQG
                     IGGIFIQSIEGSFSGIMGLPVYETVSMLQDLGYRSPLSALKP"
     gene            4525..4878
                     /locus_tag="WHR07_000730"
     CDS             4525..4878
                     /locus_tag="WHR07_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2069 domain-containing protein"
                     /protein_id="HEZ2129973.1"
                     /translation="MNRQTAYFLASFSLIALIILSLSWELWIAPLRPGGSWLALKALP
                     LCLPLSGILKKKIYTYQYSSMLVLIYFAEAVMRLFDAYPAEQICAALSAVFSIIFFIS
                     CLSFVKQYKETNNAR"
     gene            4868..6682
                     /locus_tag="WHR07_000731"
     CDS             4868..6682
                     /locus_tag="WHR07_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase C-terminal domain-containing
                     protein"
                     /protein_id="HEZ2129974.1"
                     /translation="MPAETTVSGAHPAAKLPIYILPCFLWIGIVPFTFALRLQPSPDF
                     YHDAAAAAGLIVLLFLTAGKKLFDVKIPPISFLLFAMAAFWYLQARLMNLIYPGMNDI
                     VSWIFILLAVSAWACKSLVAHYGQERIVTLLAWSLLIGSLLQSCIVVIQFAGWEDTPM
                     LQNIIVYSGQGVIGHIGQRNNLGHYLMWGILAAAYLNGQRKIPPALGAICLIMQTAVL
                     GLVNSRTILTYIAAIALILPFWYFRSDKSNRRTMLGIAAAVFLTALFQFSMNTILETF
                     TGIRYETAVERVANGGFTDLPRQIEWNKALAAFQSAPIFGHGWNSFAQQTFLINAEQH
                     NIYDNLLSNLFTHSHNIVLQLLAEMGISGTLLVAATLLTGIAGLLKRPLTPASLFLIC
                     TLAVSMCHSMLEYPLWYVYFLIPFGLMLFLSPAEASDGIAFKKAANLGILTASAAIFA
                     GLLHLDWTYTRLVNAFSPAPDDSAKTLNRKINELRYISANSPMLSFYADFSLVNFALP
                     EYPETQTWAEEATLKSLKYRPHSATYRIALYLMRQGKVAEAKQWMRATQSYYPYLMPR
                     YADEIRKLPVWAPLLPELLKDCKAFAAAPGHPEAKPCK"
     gene            6872..7549
                     /locus_tag="WHR07_000732"
     CDS             6872..7549
                     /locus_tag="WHR07_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEZ2129975.1"
                     /translation="MSRVLLVDDDALLTELLTEYLSAEGLNVRSVPDGEAGVQEILSG
                     QYDVVVLDSMMPKMNGLDVLKNVRARSTVPIIMLTAKGDDIDRIIGLEMGADDYVPKP
                     CTPRELLARINAILRRAQHSGEQNNAPNSISVSDVVLYPAKRQASVKDMPLELTSTEF
                     NLLEVLMRHAGQVVSKETLSVEALDRKLAKFDRSIDVHISSIRHKLGDASLIQTVRGL
                     GYLFVKN"
     gene            7562..8968
                     /locus_tag="WHR07_000733"
     CDS             7562..8968
                     /locus_tag="WHR07_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEZ2129976.1"
                     /translation="MKLFQRIFATFCAVIVCAIFVASFSFWLVQNTLAENQFNQRRTI
                     ETTLMGSIISAFRARGDAGAREILTEWKDSPVSSGVYVIQGDEKKDILNRYIDSYTIE
                     RARLFAAGHPHSNLVHIEYDRFGEEYLFFTKDWDKLQARRLPSPLLIPGLPLAPIWHE
                     LIILSFIIVVGLLMAYILAGNIAKPIRILGNGMDRVANGELETRISQQVDDRDDELSH
                     LAIQFDKMVEKLEKLVAKERHLLHHVSHEMRSPLARMQAIVGLIQAQPQKQEQYLKRL
                     EGELTRMDTLAGELLTLSRLETSNMALEKESLKLLPFLGNLVEDNQSIAQKNGQTVTL
                     SADGKIPENTTILANESYLYRAFDNVIRNAVNYSPEGSTILINIGQDHKHWIIDVTDN
                     GPGVDEMQLPHIFTAFYRADSSANKPGTGLGLALTQHIIEQHCGKIIAENIKPNGLRM
                     RFILPKKKTGSKTEKSAN"
     gene            9086..11512
                     /locus_tag="WHR07_000734"
     CDS             9086..11512
                     /locus_tag="WHR07_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetate--CoA ligase family
                     protein/GNAT family N-acetyltransferase"
                     /protein_id="HEZ2129977.1"
                     /translation="MSAQTDPGYFFMPNHIILIGASERPYSLGERVLSNLLSTPFQGK
                     ITPVNPRHHTIAGLPAYTSLNKIPGNADLIIAVTLPDSYDTLFKTCRKKQLRHIILIQ
                     DWDSLSAAELHTAETAIRKHHGNGLNITACTTAGIQLPSLGLNISTQDGYAAGHTAIL
                     TGNAAVSRQIDNILNKLRQGTSRHISLHPGISPITSADWLNRFGHSLHTKTAVLHHNP
                     EENQRKLFSAIRQFTRHTPLILHITCRTTETDRAVLHCLARHCNFLISFNADDLEAAL
                     RAQLSDLPPLSRLDILSDTPAEWLNAHAPKTLALHFPNLPHHIRNGHLTGTPTPSICH
                     DIASRQLARPDTQAVLTILSPSGHEDYKKTARALIRLSEQSAKPLLVSSPFSDGITHF
                     DTPTQAIRTLSYRNTAAALKQAQLDIAPPQPCRLKTPQPQNIKKALEAADPALIAEAL
                     HLPPYRHTTHNAVQFQFGSHSLYGDILTARCNGQTTAVLPPFTTLDSRHLARFAELDG
                     TQTLDQFLHTLTIIPEYRQHILGITLNLNGGQYSSDFILKTPETHDTPKRKNTGKAAQ
                     TLEHAAAKMQSAAAYLKHKNPTAAEFLRHTSEAAAELLGSKTETGAAVPNVLAPYPAA
                     YPKTLSLRNNTTVTITPILPEDAEAKQQFVRSLGPEARYTRFMTHTNELPAATLARLC
                     NPDYHCEAAWTAKDADSNIVAVVRHSRLNRNECEFGITLAEHMRGSGLAQKMMELIIQ
                     TAAQQGYRTMSADILKTNTPMIKLAEKSGFTLKESDTEKNLYRAYLNLAADKTTEKTN
                     KNLRTDHKIT"
     gene            11557..11802
                     /gene="rpsP"
                     /locus_tag="WHR07_000735"
     CDS             11557..11802
                     /gene="rpsP"
                     /locus_tag="WHR07_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEZ2129978.1"
                     /translation="MVVIRLARGGSKHRPFYNVIVTDSRSRRDGRFIERVGFYNPVAN
                     EKQERVRLNADRLNHWIAQGAQVSDSVAKLIKEQKAA"
     gene            11818..12327
                     /gene="rimM"
                     /locus_tag="WHR07_000736"
     CDS             11818..12327
                     /gene="rimM"
                     /locus_tag="WHR07_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HEZ2129979.1"
                     /translation="MTDTQNRVAMGYIKGVFGIKGWLKIAANTEYSDSLLDYPEWHLV
                     KDGKTVSVTLEAGKVVNSELQVKFEGINDRDLAFSLRGYTIEIPREAFAPTEEDEYYW
                     TDLVGMTVVNKDHTVLGKVSNLMETGANDVLMIDGEHGQILIPFVSQYIETVDTGSKI
                     ITADWGLDY"
     gene            12327..13076
                     /gene="trmD"
                     /locus_tag="WHR07_000737"
     CDS             12327..13076
                     /gene="trmD"
                     /locus_tag="WHR07_000737"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEZ2129980.1"
                     /translation="MLIQAVTIFPEMFDSITRYGVTGRANRQGIWQFEAVNPRKFADN
                     RLGCIDDRPFGGGPGMIMMAPPLHAAIEHAKAQSSQAAKVIYLSPQGKPLTHQKAVEL
                     AELPHLILLCGRYEGIDERLLQSSVDEEISIGDFVVSGGELPAMMLMDAVLRLVPGVL
                     GDMQSAEQDSFSSGILDCPHYTKPLEFQGMAVPEVLRSGNHGLIAEWRLEQSLRRTLE
                     RRPDLLEKRSLIPKESRILNKILQEQREIQS"
     gene            13092..13457
                     /gene="rplS"
                     /locus_tag="WHR07_000738"
     CDS             13092..13457
                     /gene="rplS"
                     /locus_tag="WHR07_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEZ2129981.1"
                     /translation="MNLIQQLEQEEIARLNKEIPEFAPGDTVVVSVRVVEGTRSRLQA
                     YEGVVIARRNRGLNSNFIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYL
                     RGLTGKAARIKEKLPARKG"
     gene            13779..14504
                     /locus_tag="WHR07_000739"
     CDS             13779..14504
                     /locus_tag="WHR07_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010361246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HEZ2129982.1"
                     /translation="MSIIVENLTVSYRRRPAVHHVDITFEEHSMWAVFGPNGAGKSTF
                     LKSLMGLQPIDTGSIRLDGLTRQNIAYLPQQSDIDRSQPMTVFDLAAMGLWYEIGFFR
                     GINAVQKQRVHESLERVGMRQFAGRQIAHLSNGQFQRVLFARMLVQNAKFLLLDEPFN
                     AVDARTTYELLDVLQKCHCGGHAIIAVLHDYEQVRAYFPNTLLLAREKIAAGATETIL
                     TEPYLAQANAKMQQQESPEWCAS"
     gene            14528..15403
                     /locus_tag="WHR07_000740"
     CDS             14528..15403
                     /locus_tag="WHR07_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEZ2129983.1"
                     /translation="MNLYDLLLAPFAEFDFMRYALVSVFCLSLSAAPVGVFLVMRRMS
                     LIGDALSHAVLPGAAVGYMFAGLSLPAMGLGGVAAGMLMALLAGLVSRFTTLKEDANF
                     AAFYLSSLAIGVVLVSKNGSSVDLLHLLFGSVLAVDIPALQLIAAVSSLTLITLAVIY
                     RPLVLESIDPLFLKSVGGKGGLWHVLFLVLVVMNLVSGFQALGTLMSVGLMMLPAITA
                     RLWAKHMGALILLSVLTALLCGLSGLLISYHIEIPSGPAIILCCSVLYLFSVILGKEG
                     GILTKWLKNHRHHTT"
     gene            15480..16394
                     /locus_tag="WHR07_000741"
     CDS             15480..16394
                     /locus_tag="WHR07_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HEZ2129984.1"
                     /translation="MKHLKLTLIAALLTTAATAAPLPVVTSFSILGDVAKQIGGERVS
                     IQSLVGANQDTHAYHMTSGDIKKIRSAKLILLNGLGLEAADIQRAVKQSKVSYAEATK
                     GIQPLKAEEEGGHHHDHDHDHEGHHHDHGEFDPHVWNDPVLMSAYAQNVAEALIKADP
                     EGKVYYQQRLGNYQMQLKKLHSDAQAAFNAVPAAKRKVLTGHDAFSYMGKRYHIEFIA
                     PQGVSSEAEPSAKQVAAIIRQIKREGIKAVFTENIKDTRMVDRIAKETGVNVSGKLYS
                     DALGNAPADTYIGMYRHNIKALTNAMKQ"
BASE COUNT         4309 a         5290 c         3645 g         3292 t
ORIGIN      
        1 cgtctgaagc cgattcggtt ttcagacgac atcattattt gacctgacgc aaacagaaag
       61 ccttccgcgt gcttaaacac atctcttgta gtaaaatatc taaacagatt caactggaaa
      121 cggtcaggct tcttcacgcc attcccattt caaccgccgc ctgccagatt cagacggtat
      181 tcctacttga aaacaaggag cgttacaatg aaagcagcac gtttttacga taaaggcgac
      241 atccgcatcg aagacatccc cgaaccgacc gtcgcccccg gcactgtcgg catcaatgtc
      301 gcctggtgcg gcatctgcgg tactgacctg cacgaattca tggaaggccc gattttcatt
      361 ccgccttgcg gtcatccgca cccgatttcc ggcgagtccg cacccgtcac gatgggacac
      421 gagttctccg gcgtggtcta tgccgtcggc gaaggcgtgg acgacatcaa agtcggccaa
      481 cacgtcgtgg tcgaacccta catcatccgc gatgacgtac cgaccggaga aggcagcaac
      541 taccacctct ccaaagatat gaactttatc ggcttgggcg gctgcggcgg cggtctgtcc
      601 gaaaaaatcg ccgtcaaacg tcgttgggtg catccgattt ccgacaaaat cccgttggat
      661 caagccgctt tgatcgaacc gctgtctgtc ggacaccacg cctatgtacg cagcggcgcg
      721 aaagcaggcg acgtcgcatt ggtcggcggc gcaggtccga tcggtttgct gttggctgcc
      781 gtgttgaaag ccaaaggcat caaagtcatc atcaccgagt tgagtaaagc acgcaaagac
      841 aaagcgcgcg aatccggcgt tgccgactac atcctcgacc cgtccgaagt cgatgttgtc
      901 gaagaggtga aaaaactgac caacggcgaa ggcgtggacg tggcattcga atgtaccagc
      961 gtgaacaaag tgttggatac tttggtcgaa gcctgcaaac ctgccgccaa tttggttatc
     1021 gtatccatct ggagccaccc tgcaaccgtc aacgtccaca gcgtcgtgat gaaagagctg
     1081 gatgtgcgcg gcacgattgc ctactgtaac gaccacgccg aaaccatcaa actggtcgaa
     1141 gaaggcaaaa tcaacctcga acccttcatc acccagcgca tcaagctgga cgaactggtt
     1201 tccgaaggct tcgagcgtct gatccacaac aacgaatccg ccgttaaaat tattgtgagt
     1261 ccaaacctgt aagcaaatta catttgcaac agcacaaatg ccgtctgaaa cgctcagacg
     1321 gcattttcca acgaagcgca acaggcgtat tgcccgagag cagccgttta gcctatcatt
     1381 ccgaacaaac agaaacaaac agaaggaaaa tcatgggaga ttccgtacta tccgccatcc
     1441 aacaaaccat cacccagcga aaatctgcca atccgtccga atcttacgtc gcacagctct
     1501 tgcataaggg cgaagacaaa atcctaaaaa aagtgattga agaggcgggc gaagtgttga
     1561 tggcatccaa agacaaaaac ccgtcccacc tggtttacga agttgccgac ttatggtttc
     1621 acaccatgat tcttctgaca caccacgacc tgaaggcgga agacgtattg gacgaacttg
     1681 cgcgccgcca aggtttgtcg ggcttggccg aaaaagccgc tcgcacagaa tcttgaattt
     1741 atattaaaat ccgcactttc ccacattcaa tccgtctgac cgctgttcag acggcaacgg
     1801 agccgttatg gacaactgta ttttctgcaa aatcgccgcc aaagacattc cggcgcaaac
     1861 cgtctatgaa gacggcgaaa tggtttgttt caaagacatc aaccccgctg ctccggttca
     1921 tctgctgctg attcccaaag tccatttcga ttcgttggca cacgccgcgc ccgaacatca
     1981 gccccttttg ggaaaaatga tgctgaaagt tcccgaaatc gccaaagcgg caggactggc
     2041 agacggcttc aaaaccctga tcaacaccgg aaaaggcggc ggacaagagg tcttccacct
     2101 gcatatacac atcatgggca cacccgtata aaccgttatt tcacaatcaa cccctaatac
     2161 ttacttaagg atacatcatg ggcagttttt ctctgacgca ctggattatc gtactgatta
     2221 tcgtcgtttt gatattcggc accaaaaaac tgcgcaacgt cggcaaagac ctcggcggtg
     2281 cggttcatga cttcaaacag gggctgaacg aaggtacaga cggcaaagaa gcccaaaaag
     2341 acgatgtaat cgaacacaaa aaagacgaag acaaagcgta atttatgttt gatttcggtt
     2401 tgggcgagct ggtttttgtc ggcattatcg ccctgattgt cctcggcccc gaacgcctgc
     2461 ccgaggccgc ccgcaccgcc ggacggctca tcggcaggct gcaacgcttt gtcggcagcg
     2521 tcaaacagga atttgacacg caaatcgaac tggaagaact aaggaaggca aagcaggaat
     2581 ttgaagctgc cgctgctcag gttcgagaca gcctcaaaga aaccggtacg gatatgcaga
     2641 acagtctgca cgacatttcc gacggtctga agccttggga aaaactgccc gaacagcgca
     2701 cgcctgctga tttcggtgtc gatgaaaacg gcaatccctt tcccgatgcg gcaaacaccc
     2761 tatcagacgg catttccgac gttatgccgt ccgaacgttc cgatacttcc gccgaaatcc
     2821 ttggggacag cgggcaaacc ggcagtacag ccgaacccgc ggaaaccgac caagaccgcg
     2881 catggcggga atacctgact gcttctgccg ccgcacccgt cgtacagacc gtcgaagtca
     2941 gctatatcga tactgctgtt gaaacgcctg ttccgcacac cacttccctg cgcaaacagg
     3001 caataagccg caaacgcggt ttgcgtccga aacaccgcgc caaacctaaa ttgcgcgtcc
     3061 gtaaatcata aagagagcaa tccggtgtcc gaaacacaaa acgaacaacc cgtccaaccg
     3121 cttgtcgagc atctcatcga gctgcgccgc cgcctgatgt ggacggttgt cggcatctta
     3181 gtctgctttt tcggcctaat gccgtttgcc caacaactct atacttttat cgccgacccg
     3241 ctgatggcaa acctgcccaa agacaccagc atgattgcca ccgatgtcat cgcaccgttt
     3301 ttcgtgccgg tcaaagttac cctgatggcg gcatttttaa tttcgctgcc gcatacgctc
     3361 taccaaatct gggcatttgt cgcgcccgca ctctaccaaa acgaaaaacg cctgattacg
     3421 ccgctcgtcc tctccagcgt cagcctgttt ttcatcggca tggcatttgc ctactttttg
     3481 gttttccccg tcattttcaa attccttgcc agcgttaccc ctgtcggtgt caatatggcg
     3541 acagacatcg acaaatacct ctccttcatc ttggggatgt ttgtcgcatt cggtacaacg
     3601 tttgaagtcc ccattgtcgt tatcctgtta accaaaattg gtgtggtaac aaccgaacag
     3661 ctcaaacgcg cccgccccta tgtgattgtc ggcgcgtttg tcattgccgc catcatcacg
     3721 ccgcccgatg tgatttcaca aaccctgctt gccattccgc tgattctctt atacgaagca
     3781 ggtatttggt tcggacgctt tttcacgcca cgttcagaac aggatggcga catacagccg
     3841 cctgcaacaa cctgacacta tgccgtccga acctccgcct cataccgcaa cagattaagg
     3901 aatacctttg aataccctct atttaggttc aaacagcccg cgccgaatgg aaatcctgac
     3961 acagttgggc tatcaggtcg tcaagctgcc tgccaacatc gacgaaacgg tcagacagaa
     4021 cgaagaccct gcccgttacg ttcaaaggat ggcagaagaa aaaaaccgaa ccgccctgac
     4081 cctcttttgc gaaaccaacg gcacaatgcc cgatttcccc ctgattaccg ccgacacctg
     4141 cgtcgtttca gacggcatta tattaggcaa accccgctcc caagccgaag caatcgaatt
     4201 tttaaaccga ttgtccggca aacaacatac cgtcctgact gctgtctgca ttcattatcg
     4261 cggcaaaacg tcaagccgcg tccaaaccaa ccgcgttgtt ttcaagcccc tgagttcgga
     4321 agaaatttcc gcctatgtgc aaagcggcga accgatggac aaagccggcg cctacgccgt
     4381 acaaggcata ggcggcatct ttatccaatc tatcgaaggc agcttcagcg gcattatggg
     4441 actgcccgtt tatgaaaccg tttcgatgtt gcaggatttg ggataccgct cccccttgtc
     4501 cgcccttaaa ccgtaaagac cgccgtgaac agacaaaccg cttacttcct tgcctccttc
     4561 agcctgatcg cactgataat cctgtccctt tcttgggaac tgtggattgc accgttacgc
     4621 ccgggcggct cgtggctcgc gctcaaagcc ctccccctct gtctgccgct ttcaggcatc
     4681 ttgaaaaaga aaatctatac ctaccaatac agctccatgc tggttctgat ttattttgcc
     4741 gaagccgtca tgcgcctgtt cgacgcctat ccggcagaac aaatttgcgc cgcgctttcc
     4801 gcagtattca gcatcatctt cttcatatcc tgcctgtcgt tcgtcaaaca atacaaggaa
     4861 acaaacaatg cccgctgaaa cgaccgtatc cggcgcgcac cccgccgcca aactgccgat
     4921 ttacatcctg ccctgcttcc tttggatagg catcgtcccc tttacctttg cgctcaggct
     4981 gcaaccgtcg cccgactttt accacgatgc cgccgccgca gccggcctga ttgtcctgtt
     5041 gttcctcacg gcaggaaaaa agctgtttga tgtcaaaatc ccacctatca gcttccttct
     5101 gtttgcaatg gcggcgtttt ggtatcttca ggcacgcctg atgaacctga tttaccccgg
     5161 tatgaacgac atcgtctctt ggattttcat cttgctcgcc gtcagcgcgt gggcctgcaa
     5221 gagtttggtc gcacactacg gacaagaacg catcgttacc ctgcttgcct ggtcgctgct
     5281 tatcggctcc ctgcttcaat cctgcatcgt cgtcatccag tttgccggct gggaagacac
     5341 ccccatgctt caaaacatta ttgtttacag cgggcaaggc gtaatcggac acatcggaca
     5401 gcgcaacaac ctcggacact acctgatgtg gggcatactc gccgccgcct acctcaacgg
     5461 acaacgaaaa atcccgcccg ccctcggcgc aatctgcctg attatgcaga ccgccgtttt
     5521 aggtttggtc aattcgcgca ccatcttgac ctacatagcc gccatcgccc tcatccttcc
     5581 cttctggtat ttccgttcgg acaaatccaa caggcggacg atgctcggca tagccgcagc
     5641 cgtattcctt accgcgctgt tccaattttc catgaacacc attctggaaa cctttaccgg
     5701 catccgctac gaaactgccg tcgaacgcgt tgccaacggc ggtttcacag acttgccgcg
     5761 ccaaatcgaa tggaataaag cccttgccgc cttccagtcc gccccgatat tcgggcacgg
     5821 ctggaacagt tttgcccaac aaaccttcct catcaatgcc gaacagcaca acatatacga
     5881 caacctcctc agcaacttgt tcacccattc ccacaacatc gtcctccaac tccttgcaga
     5941 gatgggaatc agcggcacgc ttctggttgc cgcaaccctg ctgacgggca ttgccgggct
     6001 gctgaaacgc cccctgaccc ccgcatcgct tttcctaatc tgcacgcttg ccgtcagtat
     6061 gtgccacagt atgctcgaat atcctttgtg gtatgtctat ttcctcatcc ctttcggact
     6121 gatgctcttc ctgtcccccg cagaggcttc agacggcatc gccttcaaaa aagccgccaa
     6181 tctcggcata ctgaccgcct ccgccgccat attcgcagga ttgctgcact tggactggac
     6241 atacacccgg ctggttaacg ccttttcccc cgcccctgac gacagtgcca aaaccctcaa
     6301 ccggaaaatc aacgagttgc gctatatttc cgcaaacagt ccgatgctgt ccttttatgc
     6361 cgacttctcc ctcgtaaact tcgccctgcc ggaatacccc gaaacccaga cttgggcgga
     6421 agaagcaacc ctcaaatcac taaaataccg cccccactcc gccacctacc gcatcgccct
     6481 ctacctgatg cggcaaggca aagttgcaga agcaaaacaa tggatgcggg cgacacagtc
     6541 ctattacccc tacctgatgc cccgatacgc cgacgaaatc cgcaaactgc ccgtatgggc
     6601 accgctgcta cccgaactgc tcaaagactg caaagccttc gccgccgcgc ccggtcatcc
     6661 ggaagcaaaa ccctgcaaat gacccgcgcc ggcggatacg gataccgccc gaaatgtaaa
     6721 gctccatgca agacattgca aaaaacagca aaccggtagg gaaatacgct atcaaaaaac
     6781 attgcagccg tgttaagata aaccgtcaaa caatcttttc acgccccgcc cgaaacaggg
     6841 tcggggcata cccttacgaa aaggaaacac catgagccgc gtattactcg tagatgacga
     6901 tgccctgctg accgaactgc tgaccgaata cctgagcgcc gaaggtctga acgtccgcag
     6961 cgttcccgac ggggaagcag gcgtacagga aatcctgagc gggcagtacg atgtagtcgt
     7021 attggattcc atgatgccca aaatgaacgg cttggatgtc ttgaaaaacg tacgcgcccg
     7081 aagcaccgtc cccatcatca tgctgaccgc caaaggcgac gacatcgacc gaatcatcgg
     7141 cttggaaatg ggcgcggacg actatgtccc caaaccctgc acaccacgcg aactcttggc
     7201 acgcatcaat gccatcctgc gccgcgcaca acacagcggc gaacagaaca acgcacccaa
     7261 cagcatctcc gtcagcgatg tcgtcctgta ccccgccaaa cgccaggcat ccgtcaaaga
     7321 catgccgctc gaactgacca gcaccgaatt caacctgctc gaagtcctga tgcgccatgc
     7381 cggacaggta gtcagcaaag aaaccctgtc cgtcgaagca ctcgaccgca agctggcaaa
     7441 attcgaccgc agtatcgacg tacacatctc cagcatccgc cacaagttgg gcgatgcctc
     7501 tctgattcaa accgtacgcg gcttgggcta cctgtttgtc aaaaactgaa gcaacgggca
     7561 aatgaaactg ttccaacgca ttttcgccac attttgcgca gttatcgtct gtgcaatctt
     7621 tgtggcgagt ttttcttttt ggctggtgca gaacaccctt gccgaaaacc agttcaacca
     7681 acgccgcacc atcgaaacca ctttgatggg cagcatcatt tccgcattcc gggcacgcgg
     7741 ggacgcgggc gcgcgcgaaa tcctgacgga atggaaagac agccccgtct catcgggcgt
     7801 gtacgttata cagggcgacg agaaaaaaga tatcctgaac cggtatatcg acagctacac
     7861 catcgaacgc gcccggcttt tcgccgccgg acacccgcat tccaacctcg tccatatcga
     7921 atacgaccgc ttcggcgaag aatacctgtt cttcaccaaa gactgggaca aactccaagc
     7981 ccgccgcctg cccagccccc tgttgatccc cggcctgccg ctcgccccga tttggcacga
     8041 actcatcata ttgtccttca tcatcgtcgt cggactgctg atggcgtaca tcctcgccgg
     8101 caatatcgcc aaacccatca gaatcttagg caacggcatg gacagggtgg caaacggaga
     8161 acttgaaacc cgtatctccc aacaggtcga cgaccgcgac gacgaattgt cccatcttgc
     8221 catccaattc gacaaaatgg tggaaaaact cgaaaaactc gttgccaaag aacgccacct
     8281 gctccaccac gtttcccacg aaatgcgctc cccgcttgcc cgtatgcagg cgattgtcgg
     8341 actgattcag gcgcagcccc aaaaacagga acaatatctc aaacggctgg aaggcgaact
     8401 gacccgcatg gatacgctgg ccggggaact gttaaccctg tcccgtctcg aaacttccaa
     8461 tatggctttg gaaaaagaaa gcctgaaact cctgcccttc ctgggcaacc tggtagaaga
     8521 caatcaaagc attgcccaga aaaacggaca aacggttacc ctgtctgccg acggaaaaat
     8581 ccccgaaaac acaaccatcc ttgccaacga aagctacctg taccgcgcct tcgacaacgt
     8641 catccgcaac gccgtcaact acagtcccga aggcagcacc atcctgatca acatcggaca
     8701 agaccacaaa cactggataa tcgacgttac cgacaacggc cccggcgtgg acgaaatgca
     8761 gctcccgcac atcttcaccg ctttctaccg tgcagactcc agtgccaaca aacccggaac
     8821 aggactgggg cttgcattga cccaacatat tattgaacag cactgcggca aaatcatcgc
     8881 cgaaaacatc aaaccgaacg ggctgcggat gcgcttcatc ctacccaaga aaaaaaccgg
     8941 ttccaaaaca gaaaaaagtg cgaactgacc ataatgccgt ctgaaccggc ttcagacggc
     9001 attgcacaaa cagttacccc aaaacaaaca cacagcgggt gcatctccaa aaatcacgca
     9061 cataccgtcc gcaaaggaat atatcatgtc ggcacaaacc gatcccggct acttcttcat
     9121 gcccaaccac attatcctga taggcgcgag cgaacgtccg tacagcctgg gcgaacgcgt
     9181 actcagcaac ctgctgagta cgccctttca aggaaaaatc acccccgtaa acccgcgcca
     9241 ccacaccata gccgggcttc ccgcctacac cagcctcaac aaaatccccg gcaatgcaga
     9301 cctgattatt gccgttaccc tacccgacag ttacgacacc ctcttcaaaa cctgccgcaa
     9361 aaagcagctc cgacacatca tcctcataca ggactgggac agcctgtctg ccgcagaact
     9421 gcacaccgcc gaaactgcca tccgcaaaca ccacggcaac ggactcaaca tcaccgcctg
     9481 caccaccgca ggcatccaac tgccctcact cggacttaac atcagtaccc aagacggata
     9541 cgccgcaggc cataccgcca tactgaccgg caatgccgcc gtcagccgcc aaatcgacaa
     9601 catcctgaac aaactccgtc aaggcacatc ccgccacatc agcctgcatc ccggcatcag
     9661 ccccatcaca tccgccgatt ggctcaaccg cttcggacac agcctgcaca ccaaaaccgc
     9721 cgtcctacac cacaaccctg aagagaatca gcgcaaactg ttcagcgcaa tccgccaatt
     9781 tacccgccat acgccgctga ttctccacat cacctgccgc acgacagaaa ccgaccgtgc
     9841 cgtactgcac tgcctcgccc gacactgcaa cttcctcatc agtttcaacg ccgacgacct
     9901 cgaagccgca ctgcgcgccc aactgtccga ccttccaccc ctgtcccgac tcgacatcct
     9961 gtccgacacg cctgccgaat ggctgaacgc gcacgcgcca aaaaccctcg ccctccactt
    10021 tcccaacctt ccccaccaca tccgcaacgg acacctgacc ggcacaccca caccctcaat
    10081 ctgccacgac atcgcctcac gtcagcttgc ccgccccgac acccaagccg tcctgaccat
    10141 cctcagcccc tccggacacg aggattacaa aaaaacagca cgcgccctta tccgcctgtc
    10201 cgaacagagc gccaaacccc tgctcgtcag cagccccttt tcagacggca taacacattt
    10261 cgacaccccc actcaggcaa tccgcaccct ttcctaccgc aacaccgccg ccgccctgaa
    10321 acaggcacag ctcgacattg caccgccgca gccatgccgt ctgaaaacac cgcaacccca
    10381 aaacatcaaa aaagccctcg aagccgccga ccccgcccta atcgccgaag ccctgcacct
    10441 ccccccctac cggcacacca cccataacgc cgtccaattc caattcggca gccactccct
    10501 ctatggcgac atcctgaccg cacgttgcaa cggacaaacc actgccgtac tcccgccgtt
    10561 taccacgctc gacagccgcc accttgcccg ctttgccgaa ctcgacggca cacaaaccct
    10621 cgaccagttc ctgcacacac tgaccatcat tcccgaatac cgccaacaca ttctcggcat
    10681 caccctcaac ctaaacggcg gacaatacag cagcgatttc atcttaaaga cacccgaaac
    10741 acacgacacg cccaaacgca agaacacagg caaagccgcc caaaccctcg aacatgccgc
    10801 cgcaaaaatg cagagtgccg ccgcatacct gaaacacaaa aacccgacag ccgccgaatt
    10861 tctccgccac acaagcgaag ccgccgcaga actgctcggc agcaaaaccg aaaccggagc
    10921 agccgtaccc aacgtacttg ccccctatcc cgcagcatac cccaaaacac tgtccctaag
    10981 aaacaacacg accgttacca ttacccccat tttgcccgaa gacgcagaag ccaaacagca
    11041 gttcgtccgc agcctcggtc ccgaagcacg gtacacacgc ttcatgaccc acaccaacga
    11101 actgcccgca gccacgttgg cacgcctgtg caaccccgat taccactgtg aagccgcatg
    11161 gacggcaaag gatgccgaca gcaacatcgt cgccgtcgtc cgccacagcc gcctgaaccg
    11221 caacgaatgc gaattcggca tcacactggc ggaacatatg cgcggcagcg gactggcaca
    11281 gaaaatgatg gaactcatca tccaaaccgc cgcacagcaa ggctaccgga ctatgagtgc
    11341 cgacattctc aaaaccaata cccccatgat caaacttgct gaaaaatcag gatttaccct
    11401 caaggaatcg gacaccgaaa aaaacctgta ccgcgcatat ctgaaccttg cggcagacaa
    11461 aacaacagaa aaaacaaata aaaacttgcg caccgaccac aaaataacct aaaatcggca
    11521 gtttccatat atccgatttt ctcaaaagga ctcaaaatgg tagttatccg tttggcacgc
    11581 ggcggctcga aacaccgccc cttctacaac gtcatcgtta ctgactcacg cagccgccgc
    11641 gacggccgct tcatcgaacg cgtaggcttc tacaaccccg tagccaacga aaaacaagag
    11701 cgcgtccgcc tcaatgcaga ccgcctgaac cactggattg cacaaggcgc gcaagtcagc
    11761 gactccgttg caaaactgat taaagaacaa aaagccgcct aattcacatt tgccgccatg
    11821 acagacactc aaaaccgggt agccatgggc tacatcaaag gcgtattcgg cataaaaggc
    11881 tggttgaaaa ttgccgccaa caccgaatat tccgacagcc ttttggacta ccccgagtgg
    11941 catttggtca aggacggcaa aaccgtcagc gttacccttg aagccggaaa agtcgtcaac
    12001 agcgaactcc aagtcaaatt cgaaggcata aacgaccgcg acttggcatt ctcattgcgc
    12061 ggttacacca tcgaaatacc ccgtgaagca ttcgccccga cagaagaaga cgaatactac
    12121 tggacagact tggtcggcat gaccgtcgtc aacaaagacc ataccgtttt aggcaaggta
    12181 agcaacctga tggaaaccgg cgcaaacgac gtattgatga ttgacggaga acacgggcag
    12241 attctgattc cgttcgtttc ccaatatatc gaaaccgtcg ataccggcag caagattatt
    12301 actgccgact ggggtttgga ctactgatgc ttatccaggc agttaccatt ttccccgaaa
    12361 tgttcgacag cattacccgc tacggcgtaa cgggacgcgc gaacagacag ggaatctggc
    12421 agtttgaagc agtcaatccc cgaaagtttg ccgacaacag attgggctgc atcgacgacc
    12481 gcccgttcgg cggcggcccg ggaatgatta tgatggctcc gccgcttcat gcagcaatag
    12541 aacacgccaa agcacaatcc tcccaagctg caaaagtcat ctacctcagc ccccaaggga
    12601 aaccgctgac acaccaaaaa gcggtagaac tggcagaact tccgcatctg attctgctgt
    12661 gcggacggta tgagggcata gacgaaaggc ttctgcaaag cagcgtcgat gaagaaatca
    12721 gcatcggaga cttcgttgtt tccggcggag agcttcccgc catgatgctg atggatgcgg
    12781 tattgaggct cgtacccggc gtattgggcg atatgcagtc tgccgaacaa gattcgttct
    12841 caagcggcat tttggactgc ccccactaca ccaaaccctt agaatttcaa ggcatggctg
    12901 ttccggaagt attacgttcc ggcaatcatg gcttgatagc ggaatggcgg ttggaacaat
    12961 cgctgcgccg caccttggag cgcagacccg atcttttgga aaagcgcagt ttaatcccaa
    13021 aggaatcccg catcttgaat aaaatcctac aagagcaacg ggaaatccaa tcataattta
    13081 ggaaaaaaac aatgaacctg attcaacagc tcgagcaaga agaaattgcc cgcctgaaca
    13141 aagaaatccc cgaattcgca ccgggcgaca ccgtagtcgt atccgtacgc gtcgtggaag
    13201 gtacccgcag ccgtctgcaa gcctacgaag gcgttgtcat tgcacgccgc aaccgtggtc
    13261 tgaacagcaa cttcatcgtc cgtaaaattt ccagcggcga aggtgttgaa cgtactttcc
    13321 aactgtactc tccgaccgtc gaaaaaatcg aagtcaaacg ccgtggcgac gtacgccgtg
    13381 ccaaactgta ctacctgcgc ggtctgaccg gcaaagctgc acgcatcaaa gaaaaactgc
    13441 ctgcacgcaa aggttgattc aaacccgttt tccccaatgc cgtctgaacc ttctgacggc
    13501 atttcttatt gccgcaacat ccgcaacgga acagcaccaa gaagcacacc ccttccggca
    13561 catcccgaat ccccgtccga accgaacaaa atttacagac caaacgttat acagtatcat
    13621 atcagccata taataataac cgctttaccg ccttcccttt caaaaccgca aatcatcatg
    13681 acaccttccc ttttactatc aggattgacc ttccgcctcg tccttgccct gattgccgta
    13741 tcccttttat ggggcgttta cttttgggca gtatccgcat gagcatcatt gtcgaaaacc
    13801 tgaccgtcag ctaccgccgc cgacctgccg tgcaccatgt ggacattact tttgaagaac
    13861 atagtatgtg ggcggttttc ggtcccaacg gcgcagggaa atccaccttt ctcaaatcct
    13921 taatgggatt gcagcctatc gatacgggca gcatccggct ggacggattg acccgtcaga
    13981 acattgccta ccttccccag cagtccgaca tcgaccgctc gcagcccatg accgttttcg
    14041 acttggcggc aatggggcta tggtatgaaa tcggtttttt cagaggaata aatgccgttc
    14101 aaaaacaacg cgttcacgaa tctttggaac gcgtcgggat gcggcagttt gccggccgcc
    14161 aaatcgccca cctctcaaac ggacaattcc agcgtgtcct ttttgcccga atgctggttc
    14221 aaaacgccaa attcctactt ctagacgaac ctttcaacgc tgttgatgca cggacgacct
    14281 acgaacttct cgacgtattg cagaaatgcc attgcggcgg acacgccatc atcgccgtac
    14341 tgcacgatta cgaacaagtc cgtgcctact ttcccaatac cctgctgctc gcccgcgaaa
    14401 aaattgcggc aggcgcaacc gagaccattc tgacagaacc ctacctcgcc caagccaacg
    14461 ccaaaatgca gcaacaggaa agccccgagt ggtgcgcgtc ataaatgccg tctgaaaccg
    14521 aaaaaccatg aacctctacg acctgctcct tgcccccttt gcagaatttg actttatgcg
    14581 ctacgccctc gtatccgtct tctgcctgtc cctcagtgcc gcacccgtcg gcgtattcct
    14641 cgtcatgcgc cgtatgagcc tgataggcga cgcattgagc cacgccgtcc tgcccggtgc
    14701 cgccgtcggc tacatgtttg ccggcttaag cctgcccgcc atgggtttgg gcggcgtagc
    14761 cgcaggtatg ctgatggcac tgcttgccgg actcgtcagc cgcttcacca ccctgaaaga
    14821 agatgccaac tttgccgcct tttatctcag cagcctcgcc atcggtgtag tcctcgtcag
    14881 caaaaacggc agcagcgtcg atctgctgca tctgcttttc ggctctgtac ttgccgtcga
    14941 tattcctgcc ctgcagctca tcgccgccgt atccagcctc acgctcatta cccttgccgt
    15001 catctaccgc ccgctcgtac tcgaaagcat cgaccccctg tttctcaaat ctgtcggcgg
    15061 caaaggcggg ctttggcacg tcctctttct cgtcctggtc gtcatgaacc tcgtatccgg
    15121 ctttcaagcc ctcggcacac tcatgtccgt cggactcatg atgctgccag ccattaccgc
    15181 ccgcctgtgg gcgaagcaca tgggcgcact catcctccta tccgttctga cagccctgct
    15241 gtgcggcttg agcgggctgc tcatttccta ccacatcgaa atcccttccg gccccgccat
    15301 catcctctgt tgcagcgtcc tttatctctt ttccgtcata ctcggcaaag aaggcggcat
    15361 tctgaccaaa tggctcaaaa accaccgcca ccacaccacc tgaccccgca agccgcttga
    15421 acaaacaggc ggcttgtttt accataacag atgttacgtt atatcacagg agaacagtta
    15481 tgaaacacct caaactcacc cttattgccg cattgctgac cactgccgca actgccgccc
    15541 cccttccggt tgtaaccagt ttcagcattt taggcgacgt tgccaaacaa atcggcggag
    15601 agcgcgtatc catacaaagt ttggtcggag ccaaccaaga tactcatgcc tatcacatga
    15661 ccagtggcga cattaaaaaa atccgcagtg caaaactcat cctgctcaac ggcttaggac
    15721 ttgaagccgc cgacatccaa cgtgccgtca aacagagcaa agtatcctat gccgaagcga
    15781 ccaaaggcat ccaacccctc aaagccgaag aagaaggcgg acaccatcat gaccacgacc
    15841 atgaccacga aggacaccac catgaccacg gcgaatttga cccgcacgtc tggaacgacc
    15901 ccgtcctcat gtccgcctat gcccaaaacg tcgccgaagc cctgataaag gccgaccccg
    15961 aaggcaaagt ttattatcaa caacgcttgg gcaactacca aatgcagctc aaaaaactgc
    16021 acagcgacgc acaagccgca tttaacgccg tccctgccgc caaacgcaaa gtcctgaccg
    16081 ggcacgatgc cttttcctac atgggcaaac gttaccatat cgaattcatc gccccgcaag
    16141 gtgtgagcag cgaagccgag ccttcagcca aacaagtcgc cgccatcatc cgacaaatca
    16201 aacgcgaagg catcaaagcc gtattcaccg aaaatatcaa agacacccgc atggttgacc
    16261 gtatcgccaa agaaaccggt gtcaacgtca gcggcaaact gtattccgac gcactcggca
    16321 acgcgcccgc agacacctac atcggaatgt accgccacaa catcaaagcc ttgaccaacg
    16381 cgatgaagca ataaaaccgt ttgattggtt tgaatttgaa aaggcaaaag gccgtctgaa
    16441 aattatagtg gattaacaaa aatcaggaca aggcgacgaa gccgcagaca gtacagatag
    16501 tacggtaagg cgaggcaacg ctgtactggt ttttgt
//
LOCUS       DAWGKF010000033        16486 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.033, whole genome shotgun sequence.
ACCESSION   DAWGKF010000033 DAWGKF010000000
VERSION     DAWGKF010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16486)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16486)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16486
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.033"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(36..761)
                     /locus_tag="WHR07_000742"
     CDS             complement(36..761)
                     /locus_tag="WHR07_000742"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HEZ2129985.1"
                     /translation="MRIPLLAPDNYAFPDPAYALARCDGLVGVSRDLDAGRLLEAYRN
                     GVFPWFLRDGWFFWYAVGPRAVIVPERLHVPRSLEKTLRNCSYRVTVNGCFAEVVAHC
                     AAAVRPNQDGTWIAPEFQTAYLKLHEMGYAHSFECHYPDENGKTRLAGGFYGVQIGRV
                     FYGESMFALQPDASKIAFACAVPFLASLGVELIDCQQDTGHMRRFGSELLPFADFAER
                     LRMLNAVPLKEEIGRREVACKGL"
     gene            complement(831..1334)
                     /gene="fur"
                     /locus_tag="WHR07_000743"
     CDS             complement(831..1334)
                     /gene="fur"
                     /locus_tag="WHR07_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HEZ2129986.1"
                     /translation="MIVGKQAEIAYYSVYYFTGILNIMEKFSNIAQLKDSGLKVTGPR
                     LKILDLFETHAEEHLSAEDVYRILLEEGVEIGVATIYRVLTQFEQAGILQRHHFETGK
                     AVYELDKGDHHDHIVCVKCGEVTEFHNPEIEALQDKIAEENGYRIVDHALYMYGVCSD
                     CQAKGKR"
     gene            1492..1869
                     /locus_tag="WHR07_000744"
     CDS             1492..1869
                     /locus_tag="WHR07_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEZ2129987.1"
                     /translation="MNKTLILVLSALFSLTACSVERVSLFPSYKLKIIQGNELEPRAV
                     AALRPGMTKDQVLLLLGSPMLRDAFHTDRWDYTFNTSRNGIIKERSNLTVYFENGVLV
                     RAEGDALQNAAEALRAKQNADKQ"
     gene            1879..2688
                     /gene="dapB"
                     /locus_tag="WHR07_000745"
     CDS             1879..2688
                     /gene="dapB"
                     /locus_tag="WHR07_000745"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HEZ2129988.1"
                     /translation="MIPLKIAIAGVNGRMGRVLVEAVNNHPDTVLSGALEHSGSEALG
                     LDAGYAVGLKTGIAISDDVDTVLAQSDVLIDFTRPEPTLKHLQKCVEKQVNIIIGTTG
                     FDDAGKAAIQAAGEKTGVVFAANFSVGVNLTFHLLDTVARVLNEGYDIEIIEGHHRHK
                     VDAPSGTALRMGEVIAGALGRDLKQCAVYGREGHTGPRDPSTIGFATVRAGDIVGDHT
                     ALFATDGERVEITHKASSRMTFAAGAVRAAVWVNGKTGLYDMQDVLGLNNR"
     gene            complement(2952..3362)
                     /locus_tag="WHR07_000746"
     CDS             complement(2952..3362)
                     /locus_tag="WHR07_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129989.1"
                     /translation="MTTYTIPKKDYQFLYIYEGTLLNYTLKNDEFHIIVQNVDYPDFP
                     QEIPTPNYTDWVKIKFKQFSYLKFIYGYATKNQDKNIKNVLELGELKQDDEILDYGGA
                     LEVIGSRYDLPTGFSIDIVCREIELEFLDQESFN"
     gene            3585..3974
                     /locus_tag="WHR07_000747"
     CDS             3585..3974
                     /locus_tag="WHR07_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF596 domain-containing protein"
                     /protein_id="HEZ2129990.1"
                     /translation="MNVKIKYNLLEYCEYLGGIFGVYKNYLNMDIKDPNLKIRFFDFL
                     EELLSDGVIELCDYRENPPKILTGSPKTQVDELRRIWPDMEEMLLYFPDNPWFYVEHF
                     WWGATCPIELTQLPKIEIYEEQMKQGK"
     gene            complement(4018..4176)
                     /locus_tag="WHR07_000748"
     CDS             complement(4018..4176)
                     /locus_tag="WHR07_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129991.1"
                     /translation="MDYFPEAARITKKGGEIVINGTSNNKYLRGIPNEAELARVGLRL
                     KYNGQLTD"
     gene            complement(4184..5356)
                     /gene="lpxB"
                     /locus_tag="WHR07_000749"
     CDS             complement(4184..5356)
                     /gene="lpxB"
                     /locus_tag="WHR07_000749"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HEZ2129992.1"
                     /translation="MWGQTNMVDKKSPLIAVSVGEASGDLLGAHLIRAIRKRCPQARF
                     TGIGGELMKAEGFESLYDQERLAVRGFVEVVRRLPEILRIRRGLVRDLLSLKPDVFVG
                     IDAPDFNLGVAEKLKRAGIPTVHYVSPSVWAWRRERVGKIVHQVNRVLCLFPMEPQLY
                     LDAGGRAEFVGHSMAQLMPLEDDRETARQTLGVDAGIPVFALLPGSRVSEIDYMAPVF
                     FQTALLLLKRYPAARFLLPAATEATKRRLAEILQRSEFAGLPLTVTDRQSETVCRAAD
                     AVLVTSGTATLEVALCKRPMVISYKISPLTYAYVKRKIKVPHVGLPNILLGKEAVPEL
                     LQHDAVPEKLAAALADWYEHPDKVAALQQDFRALHLLLKKDTADLAARAVLEEAGC"
     gene            complement(5404..6396)
                     /locus_tag="WHR07_000750"
     CDS             complement(5404..6396)
                     /locus_tag="WHR07_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEZ2129993.1"
                     /translation="MKTHEISKDSVSLIGVAEHEAGQRLDNYLIKILKGVPKSHIHRI
                     IRAGEVRLNKKRCKPDSRIAEGDTVRIPPVRVAEKEMPSERRAAVPARAFDVVYEDDA
                     LLVIDKPSGVAVHGGSGVSFGVIEQLRRARPEAKYLELVHRLDKDTSGLLMVAKKRSA
                     LVKLHEAIRNDHPKKIYLALGVGKLPDDNFHVKLPLFKYTGAQGEKMVRVSADGQSAH
                     TVFRVLSRFSDGILHGVGLSHLTLVRATLKTGRTHQIRVHLQSQGCPIAGDERYGDYQ
                     ANRRLQKLGLKRMFLHASELHLNHPLTGEPLVLKAELPPDLAQFAVMLENGTKM"
     gene            6890..9649
                     /locus_tag="WHR07_000751"
     CDS             6890..9649
                     /locus_tag="WHR07_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HEZ2129994.1"
                     /translation="MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKG
                     IITRIEPSLEACFVDYGTDRHGFLPFKEVSRSYFQDYEGGRARIQDVLKEGMEVIVQV
                     EKDERGNKGAALTTFISLAGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAQLDIPN
                     GMSIIARTAGIGRSAEELEWDLNYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRD
                     YFRPDIGEILVDNQEVYDQVAEFMSYVMPGNIGRLKLYEDHTPLFSRFQIEHQIESAF
                     SRSVSLPSGGAIVIDHTEALVSIDVNSARATRGADIEDTAFKTNMEAAEEVARQMRLR
                     DLGGLVVIDFIDMENPKHQRDVENVLRDALKKDRARVQMGKLSRFGLLELSRQRLKPA
                     LGESSHVACPRCAGTGVIRGIESTALHVLRMVQEEAMKDNTGEVRAQVPVDVATFLLN
                     EKRAELFAMEERLDVNVVLIPNIHLENPHYEINRIRTDDVEEDGEPSYKRVAEPEEDE
                     SAKPFGGEKAKAARPEPAVKGVRHTSPAPTAAPEKKTSWWDSFKAWLKRIFGGSETQA
                     ASAAETSEKRSTANRSGSRVNNRRQNPRRSKREGSKVEVREVAGKTAGQEARADKAET
                     RNNGNRRRNERGDRAAERANEAEIQGRNVQPAATVADAAPSETEVQTGKRRRNGSRNE
                     RGQTAPETAAVAETAVQTAENTPSEPHTAEDKGSKPKSERNRRERDSRDAKERRERNN
                     QRDRRQNGKKRNIPSAAKIEQYLNIHDTADKVRSAAAHVFGETDANAPITVSIADPVA
                     ERDLPTASPAVSNGDAPVYDAAEKIRRATAAILPEGATPKAEAQEMPSETATFTAAAE
                     QARETAQTGGLVLIETDPAALKAWAAQPEVQAGRGLRRSEQPKPSEVATVPAEEMIQV
                     ETRQG"
     gene            complement(10274..11263)
                     /gene="pdxA"
                     /locus_tag="WHR07_000752"
     CDS             complement(10274..11263)
                     /gene="pdxA"
                     /locus_tag="WHR07_000752"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HEZ2129995.1"
                     /translation="MKQPVFAVTSGEPAGIGPDICLDLAFARLPCRCAVLGDKNLLRA
                     RAEALGKSVVLRDFDPESGGAAYGELEVLHIPAAEAVEAGRLNPANAAYVLQLLDTAL
                     AGISDGIFDGIVTAPLNKGIINDARASTGFFSGHTEYLAEKSGTGQVVMMLAGKGLRV
                     ALVTTHLPLKDVAAAITQPLIESVARILHHDLKHKFGIKNPKILVAGLNPHAGEGGHL
                     GHEETDTIIPALENLRREGINLAGPYPADTLFQPFMLEGADAVLAMYHDQGLPVLKYH
                     SFGQGVNITLGLPFIRTSVDHGTALDLAATGRADSGSLITAVETAVEMARGSL"
     gene            11423..12850
                     /locus_tag="WHR07_000753"
     CDS             11423..12850
                     /locus_tag="WHR07_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEZ2129996.1"
                     /translation="MNENFTEWLHGWVGAINDPMWSYLVYMLLGTGLFFTVTTGFVQF
                     RLFGRSIKEMLGGRKQGDDPHGITPFQAFVTGLASRVGVGNIAGVAIAIKVGGPGAVF
                     WMWVTALIGMSSAFVESSLAQLFKVRDYDNHHFRGGPAYYITQGLGQKWLGVLFALSL
                     IFCFGFVFEAVQTNTIADTVKAAWGWEPHYVGVALVILTAPIIFGGIRRISKAAEIVV
                     PLMAVLYLFIALFIILTNIPMIPDVFGQIFSGAFKFDAAAGGLLGGLISQTMMMGIKR
                     GLYSNEAGMGSAPNAAAAAEVKHPVSQGMIQMLGVFVDTIIVCSCTAFIILIYQQPYG
                     DLSGAALTQAAIVSQVGQWGAGFLAVILFMFAFSTVIGNYAYAESNVQFIKSHWLITA
                     VFRMLVLAWVYFGAVANVPLVWDMADMAMGIMAWINLVAILLLSPLAFMLLRDYTAKL
                     KMGKDPEFKLSEHPGLKRRIKSDVW"
     gene            13175..15070
                     /gene="mnmG"
                     /locus_tag="WHR07_000754"
     CDS             13175..15070
                     /gene="mnmG"
                     /locus_tag="WHR07_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HEZ2129997.1"
                     /translation="MTHMIYPKTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIET
                     LGQMSCNPSIGGIGKGHLVRELDALGGAMALATDKSGIQFRRLNASKGAAVRATRAQA
                     DRILYKAAIREMLENQENLDLFQQAVEDVTLDGERISGVITAMGVEFKARAVVLTAGT
                     FLSGKIHIGLENYEGGRAGDPAAKSLGGRLRELKLPQGRLKTGTPPRIDGRTIDFSQL
                     TEQPGDTPVPVMSVRGNAEMHPRQVSCWITHTNTQTHDIIRSGFDRSPMFTGKIEGVG
                     PRYCPSIEDKINRFADKDSHQIFLEPEGLTTYEYYPNGISTSLPFDIQIALVRSMKGL
                     ENAHILRPGYAIEYDYFDPRNLKASLETKTIEGLFFAGQINGTTGYEEAAAQGLLAGA
                     NAVQYVRGQDPLLLRREQAYLGVLVDDLITKGVNEPYRMFTSRAEYRLQLREDNADMR
                     LTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLKTTWYTPQKLAEDEQIRVFGQKLSR
                     EANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIEQVEIQVKYQGYIDRQNEEIDSR
                     RDIETLKLPDGIDYGKVKGLSAEVQQKLNQHKPETVGQASRISGVTPAAVALLMVHLK
                     RGFKDAK"
     gene            15139..15723
                     /gene="rnhB"
                     /locus_tag="WHR07_000755"
     CDS             15139..15723
                     /gene="rnhB"
                     /locus_tag="WHR07_000755"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEZ2129998.1"
                     /translation="MHILTAGVDEAGRGPLVGSVFAAAVILPETFDLPGLTDSKKLSE
                     KKRDALAEMIKNQAAAWHVAAATPEEIASLNILHATMLAMKRAVDGLAVRPERIFIDG
                     NRIPEHLGIPAEAVVKGDSKIIEISAASVLAKTARDAEMYALAQRHPQYGFDKHKGYG
                     TKQHLEALKQYGVLPEHRRDFAPVRNLLAQQTLF"
     gene            15736..15981
                     /locus_tag="WHR07_000756"
     CDS             15736..15981
                     /locus_tag="WHR07_000756"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2129999.1"
                     /translation="MPSELQTAFPASQLQRERTHTAIPAKNRKSKKKPKIRHSRAGGN
                     PIRPVSVFFEFQVTSKPPFPQKRESRNSKLQEFIKND"
BASE COUNT         4166 a         4929 c         3999 g         3392 t
ORIGIN      
        1 accatatttg aacctgaccg aagcataagc cgccatcaaa gccccttgca cgccacttcg
       61 cgccgcccga tttcctcttt caacggcacg gcgttcaaca tccgcagacg ttcggcaaaa
      121 tccgcaaacg gcagcagctc cgaaccgaaa cggcgcatat gccccgtatc ctgctggcag
      181 tctatcagtt ccacacccaa agacgcgaga aacggcacgg cgcaggcaaa cgcgattttc
      241 gacgcatccg gttgtaatgc gaacatcgat tcgccgtaaa acaccctgcc gatctgaacg
      301 ccgtaaaacc cgcccgccaa cctcgtttta ccgttttcat cgggataatg gcactcaaac
      361 gaatgcgcgt atcccatttc gtgcagcttc aaatatgccg tctgaaactc gggcgcaatc
      421 caagttccgt cctgattcgg gcgcaccgct gccgcacaat gcgcgaccac ttccgcaaaa
      481 cagccgttga ccgtaacccg atagctgcag ttgcgtagcg ttttctccag cgagcgcgga
      541 acgtgcagac gttcgggaac aatcaccgca cgcggcccga ccgcatacca aaaaaaccaa
      601 ccgtctcgca aaaaccaagg aaacacgccg ttccgatacg cctcgagcag ccgccccgcg
      661 tccaaatccc tgctcacgcc gaccagcccg tcgcaccgtg ccaaagcata ggcaggatcg
      721 ggaaaggcat aattgtcagg ggcaagcagc ggaatacgca tggcagttct ccaaaaacac
      781 agacggcatc caaaatcatg aatgccgtct gaacaacaaa ccgtccggat ttaacgtttg
      841 cccttggcct gacagtcgct gcacacgccg tacatataaa gcgcgtgatc gacgatgcgg
      901 tagccgtttt cctcggcgat tttgtcttgc agggcttcga tttcgggatt gtggaattcc
      961 gttacctcgc cgcacttcac acagacgata tggtcgtggt ggtcgccctt gtccaactca
     1021 taaaccgcct tgcccgtttc aaaatggtgg cgttgcaaaa tgcccgcctg ctcaaattgc
     1081 gtcagcacgc gataaatcgt cgccacaccg atttccacac cctcttccaa caaaatacgg
     1141 tacacatcct cggcactcaa atgctcttcc gcatgagtct cgaacaaatc caaaatcttc
     1201 aaacgcgggc cggtaacttt cagtccactg tctttcagtt gcgcaatgtt gctgaatttt
     1261 tccataatat tcaatatccc tgtaaaataa tagacgctat aatacgcaat ttcagcctgc
     1321 ttgcccacta tcacaccata gcagtttgca atagcaaaac cgcaacggcg gacgggcagt
     1381 cggacacaga cagggtgaaa taccgcttaa gcgtatgatt atcgttcgct tttataaaat
     1441 attcaagcag tgctacacta gacatcccga tttgcacaga aaggttctcc cgtgaacaaa
     1501 accctcatac tcgtcctttc cgccctgttc agcctgaccg cgtgcagcgt cgaacgcgtt
     1561 tcactgttcc cctcgtacaa actcaaaatc atacagggca acgaactcga accccgcgcc
     1621 gttgccgccc tgcgccccgg catgaccaaa gaccaagtcc tgctcctgct cggcagcccc
     1681 atgctgcgcg acgcattcca taccgaccgc tgggactata ccttcaacac ctcccgcaac
     1741 ggcatcatca aagaacgcag caatctgacc gtctattttg aaaacggcgt gctcgtacgc
     1801 gccgaaggcg acgccctcca aaatgccgcc gaagccctcc gcgcgaaaca aaacgcagac
     1861 aaacaataag gaacacacat gataccgctc aaaatcgcca tcgccggcgt caacggccgc
     1921 atggggcgcg tattggttga agccgtcaac aaccatcccg acaccgtcct ttccggcgcg
     1981 ctcgaacact cgggctcaga agccctcggg ctggacgcag gctacgccgt cggactcaaa
     2041 accggcatcg ccatttcaga cgacgttgac accgttctcg cacaaagcga cgtactcatc
     2101 gactttaccc gccccgagcc gaccctcaaa cacctgcaaa aatgcgttga aaaacaagtc
     2161 aacatcatca tcggcacaac aggcttcgac gatgcgggca aagccgccat ccaagccgca
     2221 ggcgaaaaaa caggcgttgt cttcgccgcc aacttcagcg tcggcgtcaa cctcaccttc
     2281 cacctcctcg acaccgtcgc ccgcgtatta aacgaaggct acgacatcga aatcattgaa
     2341 ggtcaccacc gccacaaagt cgatgccccc agcggcaccg cgttacgcat gggtgaagtc
     2401 atcgccggcg cgctcggccg cgacctcaaa caatgcgccg tttacggccg tgaaggccac
     2461 accggtccgc gcgatccgtc caccatcggc tttgccaccg tccgcgcagg cgacatcgtc
     2521 ggcgaccaca ccgccctctt cgccaccgac ggcgaacgcg tggaaatcac ccacaaagcc
     2581 agcagccgca tgacctttgc cgccggtgcc gtccgcgccg cagtttgggt aaacggcaaa
     2641 acgggtttgt acgatatgca ggatgtactc gggctgaaca accgttaacc cccatacaaa
     2701 atgccgtctg aaaagatatt gttcagacgg cattttgccg acaggctccg tatcggcata
     2761 tcaatgtttc aacacacagg acgacacata aagcgtcgcc ctatgtgttg ccctgattcg
     2821 gaaggggtta cgcccctccc aaataaagtc tgattctacc gccccgaagg acagatgtcc
     2881 gagtggcggg gtttcaaccg aaaaggaaat acgataaagt tgcctgctca gcataacaag
     2941 ctacggctcg tttaattgaa actctcctga tctaaaaatt ctaactctat ttcccggcaa
     3001 actatatcta tactaaaacc ggtcggaaga tcatacctac tgcctatcac ttccagcgca
     3061 cctccataat ccaagatttc atcatcctgc tttaattctc caagttccaa tacatttttg
     3121 atatttttat cttggttctt cgtggcgtat ccatagataa atttcagata gctgaactgc
     3181 ttgaatttaa tttttaccca gtctgtataa tttggtgtag gaatctcttg aggaaagtcc
     3241 ggataatcca cattctggac gatgatatgg aattcatcgt ttttcaaagt atagtttaat
     3301 agagtgccct catatatata cagaaattga taatcttttt ttggaatggt ataagttgtc
     3361 atattatttt accttttcaa aaacaatgag tttaagattt tttgagtcca agttggttct
     3421 actactctta tgaaatttca gttgtttaaa ctcttccttt attttaagga atttttcaac
     3481 tagccgagaa caaactggag caaaatggac gattgagttt aggaatcaac ctgattcagt
     3541 acatgggcaa agattagaat taaaatttag ataaaggtta cgttatgaat gtgaagataa
     3601 aatataatct tttagaatat tgtgaatatt taggtggtat ttttggtgtt tataaaaatt
     3661 atttaaatat ggatatcaaa gatccaaatt taaaaattag attttttgat tttttggaag
     3721 aacttttatc agatggtgtt attgaattat gcgattatcg tgaaaatcct ccaaaaatat
     3781 taactggttc gccaaaaaca caggtagatg aattaagaag aatttggccg gatatggaag
     3841 agatgttgct atattttcca gataatcctt ggttttatgt agaacatttt tggtggggag
     3901 caacttgccc tattgaactg acacaattgc ctaaaataga aatttacgaa gaacaaatga
     3961 aacaaggtaa gtaagcgtat tagtataagc tataatcata aatcatatat aacaaaatta
     4021 atcagttaac tgaccattat attttaacct taatcccact cgagccagtt ctgcttcatt
     4081 tggaattcct cttaaatact tattgtttga tgtgccatta atcacaattt ctcccccttt
     4141 ttttgtaata cgtgctgctt cgggaaaata atccattaac cgctcaacat cccgcctctt
     4201 ccaaaaccgc gcgcgcggcc aaatccgccg tatctttttt caacagcagg tgcaacgccc
     4261 tgaaatcctg ttgcagcgcg gcaaccttat cggggtgttc gtaccagtcc gccaacgccg
     4321 ccgccagttt ttccggtacg gcatcatgtt gaagcagctc cggcacagcc tccttaccca
     4381 acaggatatt cggcaggcca acatgcggca ctttgatttt gcgtttcaca taagcataag
     4441 tcagcggcga aatcttgtag ctgatgacca tcggacgctt gcacagcgcc acttccaaag
     4501 tcgccgtacc gctcgttacc agcaccgcat ccgccgccct gcacaccgtt tcagactgtc
     4561 tgtcggttac cgtcagcggt aatccggcaa actccgaacg ctgcaaaatt tccgccaaac
     4621 gccgcttcgt cgcctccgtt gcggcaggca gcaggaagcg tgcggcggga tagcgtttca
     4681 acaacaataa tgccgtctga aaaaacaccg gcgccatata gtcgatttcg ctgacgcggc
     4741 tgccgggcag cagggcgaat acggggatgc cggcatccac gcccaaagtt tgccgcgccg
     4801 tttcacggtc gtcttccaag ggcataagct gcgccatcga atgaccgaca aactccgcac
     4861 gtccgcccgc atcgagataa agctgcggct ccatcgggaa caggcacagc acgcggttga
     4921 cctgatgcac gattttgccc acgcgttccc gccgccacgc ccacaccgac gggctgacat
     4981 aatgcacggt cggaatgccc gcccgtttca gcttttccgc cacacccaaa ttgaaatcgg
     5041 gcgcatcgat accgacaaag acatcaggtt tcaacgacag caaatcccgt accagccccc
     5101 tgcgtatccg taaaatttcc ggcagccgcc tgaccacttc gacaaagccg cgcaccgcca
     5161 gccgctcctg atcataaagg ctctcgaaac cttccgcctt catcagttcc ccgccgatgc
     5221 cggtaaaccg cgcctgcggg caacgcttgc ggatggcgcg tatcaggtgc gcccccaaca
     5281 ggtcgcccga cgcttcgccg acactgacgg caatcaaagg gcttttttta tcaaccatat
     5341 tcgtctgtcc ccacatactt tcacgtcccg atgccgtctg aaggcttcag acggcatcgg
     5401 ggttcacatt ttcgtcccgt tttccaacat caccgcaaac tgcgccaagt ccggcggcag
     5461 ctccgccttc aacaccagcg gctcacccgt gagcggatgg ttcaggtgca gctcggacgc
     5521 gtgcaaaaac atccgcttca aacccaactt ctgcaaacga cggttcgcct gataatcgcc
     5581 gtagcgttcg tcgcccgcaa tcggacagcc ttgagattgc aggtggacgc ggatttggtg
     5641 cgtgcgcccc gttttcaacg tcgcccgcac caaagtcagg tgcgacagcc cgacaccgtg
     5701 caaaatgccg tctgaaaaac ggcttaacac acggaacacc gtatgcgccg actgcccgtc
     5761 cgcactgacg cgcaccatct tttcgccttg tgcgccggta tatttgaaca ggggcagttt
     5821 gacatggaaa ttgtcgtccg gcagtttgcc cacccccagc gcaaggtaga tttttttggg
     5881 gtggtcgtta cggatggctt cgtgaagttt gacgagcgcg ctgcgtttct tcgccaccat
     5941 caacaagccg ctcgtatcct tgtccaaacg atgaaccaac tccaaatact tcgcctccgg
     6001 acgggcgcgg cgcaactgtt cgataacgcc gaaactcacg ccgctgccgc cgtggacggc
     6061 aacgccggac ggtttgtcga tgaccaaaag cgcatcgtct tcgtaaacaa cgtcaaacgc
     6121 acgcgccggt acggcggcac gcctttcaga cggcatttcc ttctccgcca cgcgcacagg
     6181 cggaatccgc accgtatccc cctccgcaat acggctgtcg ggtttgcagc gtttcttgtt
     6241 caaccgcacc tcgccggcgc ggataatgcg gtggatatgg ctcttgggaa cacccttgag
     6301 gatttttatc agatagttat caaggcgttg acccgcctca tgttcggcaa cccctatcaa
     6361 gctgaccgaa tctttgctta tttcgtgcgt tttcatctat aatccgaaca tccgtttcag
     6421 caaaaagcgc gcccgccgcg cccccctgaa acggtttact ttaaaacgga attttatatt
     6481 aaaaacgcac tccgcaaagc attttccctg cgcctgttcc cagccggcag gcgcagaacg
     6541 taatcaagtt tgaattgatt ttgccgtttc ggcgcggaag taagacggca gccgggcccc
     6601 aagtcccaaa cgcaaaccgc ccaaaacaca ggcatcacga taacaagaag aagccggccc
     6661 ccatttttcc gaccgcagcg ttcggaacgc ggcagacaaa ccgccgcatc gatctttata
     6721 gccttctgta tccgaccctt ccgcacacgg ttctccggaa cgtgcatccc tgcggatttt
     6781 caactcaaaa actgattacc ggttttatcc gaaaacatcg gaaaacccag ccttacggaa
     6841 tgccgaaccg gaccggcgcg cccgaatgcc gcccgtccac gaggtgatca tgaaaagaat
     6901 gttattcaac gcaacgcagg ccgaagagct gcgcgttgcc atcgtcgacg gacaaaacct
     6961 gctggatttg gacatcgaaa cgctgggcaa agaacagcgc aaaggcaata tctacaaagg
     7021 catcattacc cgcatcgagc cgtcgctgga agcgtgtttc gtggattacg gaaccgaccg
     7081 ccacggcttc ttgccgttta aagaagtctc ccgctcatac ttccaagact acgaaggcgg
     7141 acgcgcgcgc atccaagacg tgctcaaaga aggcatggaa gtcatcgtcc aagttgaaaa
     7201 agacgagcgc ggcaacaaag gcgcggcgct gaccaccttc atcagcctcg ccggacgcta
     7261 tctggtattg atgccgaaca acccgcgcgg cggcggcgta tcccgccgta tcgaaggcga
     7321 agaacgtcaa gaactcaaag ccgctatggc gcaactcgac attccgaacg gcatgagcat
     7381 catcgcccgt accgccggca tcggccgcag cgcggaagag ttggaatggg acttgaacta
     7441 cctcaaacaa ctctggcagg cgattgaaga agcaggaaaa gcgcatcacg acccctacct
     7501 gctctttatg gaaagctcgc tgctgatccg agccatccgc gactatttcc gccccgacat
     7561 cggcgagatt ttggtggaca atcaagaagt ttacgaccaa gttgccgagt tcatgagcta
     7621 cgtcatgccg ggcaatatag gccgtctgaa actctacgaa gaccacacgc cgctgttttc
     7681 ccgcttccaa atcgaacatc aaatcgaaag cgcgttctcg cgcagcgtca gcctgccctc
     7741 cggcggcgcg attgtgatcg accataccga agccctcgtt tccatcgacg tgaactccgc
     7801 acgcgccaca cgcggcgcgg acattgaaga caccgcgttc aaaaccaata tggaagccgc
     7861 cgaagaagtc gcccgacaaa tgcgcctgcg cgacttgggc ggtttggtcg tcatcgactt
     7921 catcgatatg gaaaacccca aacaccagcg cgatgtggaa aacgtcctgc gcgacgcgct
     7981 caaaaaagac cgcgcccgcg tgcagatggg caaactctcc cgcttcggcc ttttggaatt
     8041 gagccgccaa cgcctgaaac cagctttggg cgaaagcagc cacgtcgcct gtccgcgctg
     8101 cgccggcacc ggcgtgattc ggggcatcga atccaccgcc ctgcacgttt tgcgtatggt
     8161 tcaagaagaa gcaatgaaag acaacaccgg cgaagtgcgc gcccaagtgc ccgtcgatgt
     8221 cgccaccttc ctgttaaacg aaaaacgcgc cgagctgttt gcgatggaag agcgtttgga
     8281 tgtcaacgtc gtcctgattc cgaacatcca cctcgaaaac ccgcactacg aaatcaaccg
     8341 catccgcacc gacgacgtag aagaagacgg cgaaccgagc tacaagcgcg tcgccgagcc
     8401 tgaagaagac gaatccgcca aaccgttcgg cggcgaaaaa gccaaagccg cccgccccga
     8461 acccgccgtc aaaggcgtgc gccacaccag ccccgccccg actgccgccc ccgagaaaaa
     8521 aacctcctgg tgggacagct tcaaagcttg gctcaaacgc attttcggcg gcagcgaaac
     8581 ccaagccgcg tccgctgccg aaacctccga aaaacgcagc acggcaaacc gcagcggcag
     8641 ccgcgtcaac aaccgccgcc aaaacccgcg ccgcagcaaa cgcgaaggca gcaaagtaga
     8701 agtccgcgaa gtggcaggca aaactgccgg acaggaagcg cgcgccgaca aagccgaaac
     8761 gcgcaacaac ggcaaccgcc gccgcaacga acgcggcgac cgtgccgccg aacgcgccaa
     8821 cgaagcggaa atccaaggtc gcaacgtaca gcctgccgca accgttgcag atgccgcacc
     8881 gtccgaaacc gaagtgcaaa ccggaaaacg ccgccgcaac ggcagccgca acgaacgcgg
     8941 tcaaaccgcg ccggaaaccg ccgccgttgc cgaaacagcc gttcagacag cggaaaacac
     9001 gccgtccgaa ccgcataccg cagaagacaa aggcagcaag cccaaatccg aacgcaaccg
     9061 ccgcgaacgc gacagccgcg acgccaaaga acgccgcgag cgcaacaatc agcgcgaccg
     9121 ccgtcaaaac ggcaaaaaac gcaatattcc gtctgccgcc aaaatcgagc agtacctgaa
     9181 tattcacgac accgccgaca aagtccgttc cgccgccgcc catgttttcg gcgaaaccga
     9241 cgcaaacgcg ccgattaccg tcagcattgc cgatccggtt gcagaaaggg atcttccgac
     9301 agcatctccc gccgtttcaa acggcgacgc accggtttat gatgcggcgg aaaaaatccg
     9361 ccgtgccacc gccgccatcc tgcccgaagg cgcgacaccg aaagccgaag cacaggaaat
     9421 gccgtctgaa accgcaacct ttacggctgc ggcggaacag gcacgggaaa ccgcacaaac
     9481 cggcggactc gtcctgatcg aaaccgaccc tgccgcattg aaggcatggg cggcacaacc
     9541 cgaagtccaa gccggacgcg gtttgcgccg ttccgaacag cccaagccgt ctgaagtcgc
     9601 aaccgtccct gccgaagaaa tgatccaagt cgaaacccgg caaggctgaa ccgacggcgg
     9661 caaaaagagg ttctgttccg cagaacctct tttttacatg ggttcggata cctgcaatgc
     9721 cgtctgaaac ttcgccattc ccgtgattac cgaaacattc ctccattccc atgattcccg
     9781 caacattccg tcattcccat gattcccgca acattccgtc attcccgtga aaacgggaat
     9841 ctagaacctc aaactttcag ataatctttg aatattgccg ccgcccaaag gtctggattc
     9901 ccacaacatt ccgtcattcc cgtgaaaacg ggaatctaga acctctaaac tttcagataa
     9961 tctttgaata ttgccgtcgc ccaaaggcct ggattcccgc ctgcgcggga atgacggttt
    10021 agaagttgcc cgaaacctca aaaaaaaccg aaaccgaaca agccggattc ccgcaacctt
    10081 tcgtcattcc cgtgaaaacg ggaatctaga acctcaaact ttcagataat ctttgaatat
    10141 tgccgtcgcc cgaaggtctg gattcccgcc tgcgcgggaa tgacgatttg gaaattaccc
    10201 gaaacccaaa aacaactgaa accgaacaga ccggattccc gcctgcgcgg aaatgacggg
    10261 tcttttatca tctttaaagg ctgccgcgcg ccatctcgac ggcggtctcc acggcagtta
    10321 tcaggctgcc ggaatccgcc ctgccggttg ccgccaaatc aagcgcggtg ccgtgatcga
    10381 cggaggtgcg gataaagggc aggccgagcg tgatgttcac gccctgtccg aagctgtggt
    10441 atttcaacac gggcagccct tggtcgtggt acatcgccaa tacggcatcc gcaccttcga
    10501 gcataaacgg ttggaacaag gtatccgccg gatacgggcc ggcgaggttt atcccttcgc
    10561 ggcgcaggtt ttcgagcgcg gggataatgg tgtcggtttc ttcgtgtccg aggtgtccgc
    10621 cttcgccggc gtgggggttg agtccggcga ctaggatttt gggatttttg atgccgaatt
    10681 tgtgttttaa gtcgtgatgc aaaatgcgtg cgacgctttc aatcagcggt tgcgtgatgg
    10741 cggcggcaac gtctttcagc ggcaggtggg tcgttacgag ggcgacgcgc aggcctttgc
    10801 cggcaagcat catcacaacc tgccccgtgc cgcttttttc cgccagatat tcggtgtgtc
    10861 cgctgaaaaa acctgtgctt gcgcgcgcgt cgttgatgat gcctttgttc agcggcgcgg
    10921 taacgatgcc gtcgaaaatg ccgtctgaaa tgcctgcgag cgcggtatcc aaaagttgca
    10981 gcacataggc ggcgttggcg ggattgagcc gccctgcctc aaccgcttcg gcggcaggga
    11041 tgtgcagcac ttccagctcg ccgtatgccg cgccgcctga ttccggatcg aagtcgcgca
    11101 agacgacgct tttgcccaag gcttcggcgc gcgcgcgcaa taggtttttg tcgcccaata
    11161 ccgcgcagcg gcagggcagg cgtgcaaacg ccaagtccaa acaaatatcg gggccgatgc
    11221 cggcaggctc gccggaagta acggcaaaaa caggctgttt catcgtgttt gctccaaaca
    11281 aaatgcgatt ctaacgccgc agccgcgcgg cgatgtaaat ttttctgatt ttgttgacaa
    11341 tctgctagaa tgggcgttta caaaatttaa accctgcttg cataccgcca atatgtgcgg
    11401 gtttcaactt taaggaagcg atatgaacga gaactttacc gaatggctgc acggctgggt
    11461 cggcgccatc aacgatccga tgtggtcata cttggtttat atgcttttgg gtacggggct
    11521 tttcttcacc gtaaccacgg gctttgtcca attccgcctg ttcgggcgca gcatcaaaga
    11581 aatgctcggc ggccgcaaac agggggacga ccctcacggc atcacgccgt ttcaggcatt
    11641 tgtaaccggc cttgccagcc gcgtgggcgt gggcaatatc gcgggcgtgg caatcgccat
    11701 caaagtcggc ggaccgggcg cggtgttttg gatgtgggta accgccttaa tcggtatgag
    11761 ttcggcgttt gtcgaatctt cgctggcgca gctctttaaa gtccgcgact acgacaacca
    11821 ccatttccgg ggcggccctg cctactacat cactcaaggg ctggggcaga aatggctggg
    11881 cgtgttgttc gccctgagcc tgattttctg tttcggcttt gtgtttgaag cggttcagac
    11941 caataccatc gccgataccg tcaaagcggc atggggttgg gagcctcatt atgtcggcgt
    12001 cgccctggtg attttaaccg cgccgattat cttcggcggc atcaggcgca tatctaaagc
    12061 ggcggaaatc gtcgtccccc tgatggcggt tttgtacctc tttatcgcgc ttttcatcat
    12121 tttgaccaat attccgatga ttccagacgt gttcggtcag attttttcgg gcgcgttcaa
    12181 attcgacgcg gcagcaggcg gcttactcgg cggtctgatt tcacaaacga tgatgatggg
    12241 catcaaacgc ggcctgtatt ccaacgaggc gggtatgggt tccgcgccga acgccgctgc
    12301 cgccgccgaa gtgaaacacc ctgtttcgca aggtatgatt caaatgctgg gcgtgtttgt
    12361 cgataccatc atcgtttgtt cttgcaccgc cttcatcatc ttgatttacc aacagcctta
    12421 cggcgatttg agcggtgcgg cgttgacgca ggcggcgatt gtcagccaag tggggcaatg
    12481 gggcgcgggc ttcctcgccg tcatcctgtt tatgtttgcc ttttccaccg ttatcggcaa
    12541 ctatgcctat gccgagtcca acgtccaatt catcaaaagc cattggctga ttaccgccgt
    12601 tttccgtatg ctggttttgg cgtgggtcta tttcggcgcg gttgccaatg tgcctttggt
    12661 ctgggatatg gcggatatgg cgatgggcat tatggcgtgg atcaaccttg tcgccatcct
    12721 gctgctctcg ccactggcgt ttatgctgct gcgcgattac accgccaagc tgaaaatggg
    12781 caaagacccc gagttcaaac tttccgaaca tccgggcctg aaacgccgta tcaaatccga
    12841 cgtttggtaa atcccgccct taccggagcc gcttccccgc gaagcggctt ttccctttcc
    12901 gcacactgta aaaacagggc gaacaagcgt acaatcccaa ccctttactt ttgaatccat
    12961 ttcgtttttc agacggcata ttgaatatag tggtttaaca aaaatcagga caaggcgacg
    13021 aagccgcaga cagtacaagc agtacgaaac cgattcactt ggtacttcag caccttagag
    13081 aatcgttctc tttgagctaa ggcgaagcaa cgacgtactg gtttttgtta atccactata
    13141 aatgccgtct gaaacaccgt caggcaatac acacatgacc cacatgattt accccaaaac
    13201 ctacgacgtt atcgtcgtcg gcggcggaca cgccggcaca gaagccgcgc tcgccgccgc
    13261 ccgtatgggc gcgcagacgc ttttgctcac acacaatatt gaaacgctcg gacaaatgtc
    13321 gtgcaaccct tccatcggcg gcatcggcaa agggcatttg gtacgcgaac tcgacgcgct
    13381 cggcggcgca atggcgttgg ccaccgacaa atccggtatc cagttccgcc gcctgaacgc
    13441 cagcaaaggc gcggcagttc gagccacgcg cgcgcaggcc gaccgcattt tgtacaaagc
    13501 cgccatccgc gaaatgttgg aaaaccaaga aaacctcgac cttttccaac aagccgtcga
    13561 agacgtaacg ctcgacggcg aacgcatcag cggcgtaatc accgcgatgg gcgtggaatt
    13621 caaagcccgc gccgtggtgc tgaccgcagg cacatttttg tccggcaaaa tccatatcgg
    13681 tttggaaaac tacgaaggcg gccgcgccgg cgaccccgcc gccaaatcgc tgggcggacg
    13741 tttgcgcgaa ttgaagctgc cgcaaggccg tctgaaaacc ggcacgccgc cgcgcatcga
    13801 cggacgcacg attgactttt cccaactgac cgaacagccc ggcgacacac ccgttcccgt
    13861 catgtccgtg cgcggcaacg ccgaaatgca cccgcgccaa gtgtcctgct ggattacgca
    13921 taccaacacg caaacccacg acatcatccg ctcaggcttc gaccgcagcc cgatgtttac
    13981 cggcaaaatc gaaggcgtgg gcccgcgtta ttgtccgtct atcgaagaca aaatcaaccg
    14041 tttcgccgat aaagacagcc accagatttt cctagaaccc gaaggcctga ctacgtacga
    14101 atactatcct aacggtatct ccaccagcct gccgttcgac atccaaatcg cgctcgtccg
    14161 cagtatgaaa ggtttggaaa acgcccatat cctgcgcccc ggctacgcca tcgaatacga
    14221 ctacttcgac ccgcgcaacc tcaaagccag cctcgaaacc aaaaccattg agggactgtt
    14281 tttcgctggg caaatcaacg gtacgaccgg ctacgaagaa gccgccgcgc aaggtttatt
    14341 ggcaggcgcg aacgccgtgc aatatgtgcg cggacaagac ccgctcctgc tgcgccgcga
    14401 acaagcctac ctcggcgtat tggtggacga cctcatcacc aaaggcgtga acgaacccta
    14461 ccgaatgttc accagccgcg ccgaataccg cctgcaactc agggaagaca acgccgacat
    14521 gcgcctgacc gaagacggct acaaaatcgg cttggtgggt gaagcgcaat ggcgtatgtt
    14581 caacgaaaaa cgcgaagccg tcgaacgcga aatccaacgt ttgaaaacaa cgtggtacac
    14641 accgcaaaaa ctcgccgaag acgaacaaat ccgcgtattc ggacaaaaac tcagccgaga
    14701 agccaacctg cacgatttgt tacgccgccc gaacctcgac tacgccgcgc tgatgacgct
    14761 cgaaggcgcg atgccgtctg aaaacctctc cgccgaagtc atcgaacaag tcgaaatcca
    14821 agtcaaatac caaggctata tcgaccgcca aaacgaagaa atcgacagcc gccgcgacat
    14881 cgaaacctta aaactgcccg acggcatcga ttacggcaaa gtcaaaggct tgtcggcaga
    14941 agtgcagcaa aagctcaacc agcacaaacc cgaaaccgtc gggcaggcaa gccgcatttc
    15001 cggtgtaacg cctgccgccg tcgcactgct gatggtgcat ttgaagcgcg gatttaaaga
    15061 cgcgaaataa acacatcggc gcgatgccgt ctgaaacacc gttcagacgg cattcccacc
    15121 atcccgacag gaaacatcat gcacatactg accgccggcg tggacgaggc aggacgcgga
    15181 cctttagtcg gcagcgtgtt tgccgccgcc gtcatccttc cggaaacatt cgacctgccc
    15241 ggactgaccg actccaaaaa actcagcgag aaaaaacgcg acgcgcttgc cgaaatgata
    15301 aaaaatcagg cggccgcgtg gcacgtcgcc gccgccacgc ccgaagaaat cgccagcctc
    15361 aacatcctgc acgctaccat gctcgccatg aaacgcgccg ttgacggttt ggctgtgcgt
    15421 cccgaaagaa tattcatcga cggcaaccgc attccagaac atttaggtat ccctgccgaa
    15481 gccgtcgtca aaggcgacag caaaatcatc gaaatctccg ccgcatccgt tttggcaaag
    15541 accgcacgcg atgcggaaat gtacgcactg gcgcaacgcc atccccaata cggtttcgac
    15601 aaacacaaag gttacggcac gaagcagcat ctggaagccc tcaaacaata cggcgtgctg
    15661 cccgaacatc gccgcgactt cgcccccgtc agaaacctgc tcgcgcagca gacgctgttt
    15721 taaaccggca caaaaatgcc gtctgaactt cagacggcat ttccagcatc gcaacttcaa
    15781 agagaaagaa cccataccgc cattcccgcg aaaaacagaa aatcaaaaaa gaaacctaaa
    15841 atccgtcatt cccgcgcagg cgggaatcca atccgtccgg tttccgtttt ttttgaattt
    15901 caggtaactt ccaaaccgcc attcccgcaa aagcgggaat ctagaaactc aaagctgcaa
    15961 gaatttatca aaaatgactg aagctcaaaa aaccggattc ctacgaaaac aggaatccgg
    16021 agtctcaggg ctggcaaaac cgttttaccc gataagtttc cgtaccgaca gacctagatt
    16081 cccgccttcg cgggaatgac gaaattttag gcttctgttt tgattttttg tttttgcggg
    16141 aatgacgaaa ttttagattg caggcattta tcggataaaa cagaaattaa gcgtgacgaa
    16201 aatttatccg aaatcacagc aacttttccg cgtcattccc gcaaaagcgg gaatctagaa
    16261 actcaaagct gcaagaattt atcaaaaatg actgaaactc aaaaaaccgg attcccgcga
    16321 aaacaggaat ccggagtctc agggttggaa aaaccgtttt tcccgataag tttccgtacc
    16381 gacagaccta gattcccgcc tgcacgggaa tgacgatatt tcagttttgt gtttttgatt
    16441 tttttgtttt tgcgggaatg acgatatagt ggattaacaa aaatca
//
LOCUS       DAWGKF010000034        15896 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.034, whole genome shotgun sequence.
ACCESSION   DAWGKF010000034 DAWGKF010000000
VERSION     DAWGKF010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15896)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15896)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15896
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.034"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(206..277)
                     /locus_tag="WHR07_000757"
     tRNA            complement(206..277)
                     /locus_tag="WHR07_000757"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(242..244),aa:Arg,seq:cct)
     gene            complement(297..743)
                     /locus_tag="WHR07_000758"
     CDS             complement(297..743)
                     /locus_tag="WHR07_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HEZ2130000.1"
                     /translation="MNFSFVPLFLVTLILLGVVSNNNSITISATILLLMQQTALVQFV
                     PLVEKHGLNLGIILLTIGVLSPLVSGKAQVPPVAEFLNFKMISAVFIGIFVAWLAGRG
                     VPLMGQQPVLITGLLIGTVIGVAFMGGIPVGPLIAAGILSFVVGKG"
     gene            complement(748..1722)
                     /gene="ispB"
                     /locus_tag="WHR07_000759"
     CDS             complement(748..1722)
                     /gene="ispB"
                     /locus_tag="WHR07_000759"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HEZ2130001.1"
                     /translation="MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISA
                     GGKRLRPIMTILAGKAVGYDDGKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATAN
                     NLFGNAAAVLVGDFLYTRAFQLMVDSDSMRVLEVMADATNIIAEGEVMQLMNIGNTDI
                     TEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDY
                     SGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQVANDVRTALENADRSYFEKIHDYV
                     VRSDALAYSIGEARKAVDCAVTALDALPDSEVKDAMIQLAKESLVRVS"
     gene            complement(1738..1926)
                     /locus_tag="WHR07_000760"
     CDS             complement(1738..1926)
                     /locus_tag="WHR07_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130002.1"
                     /translation="MVNIRTPLCGTRHCIVICLFCQSLRGSDNHMPSEKMYPDGFADI
                     IARYLNQLSSGICRLMEA"
     gene            1946..2254
                     /gene="rplU"
                     /locus_tag="WHR07_000761"
     CDS             1946..2254
                     /gene="rplU"
                     /locus_tag="WHR07_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEZ2130003.1"
                     /translation="MYAVVKTGGKQYKVSVGEKLKVEQIPAELDSQIELTEVLMIADG
                     ESVKVGAPFIEGAKVTAKVVAHGRGEKVRIFKMRRRKHYQKRQGHRQNFTQIEIVAIA
                     "
     gene            2279..2551
                     /gene="rpmA"
                     /locus_tag="WHR07_000762"
     CDS             2279..2551
                     /gene="rpmA"
                     /locus_tag="WHR07_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEZ2130004.1"
                     /translation="MASKKAGGSTRNGRDSEAKRLGVKAYGNELIPAGSIIVRQRGTK
                     FHAGDNVGMGKDHTLFAKVDGYVEFKTKGALNRKTVSIRPYTGSEE"
     gene            2786..3970
                     /gene="ubiM"
                     /locus_tag="WHR07_000763"
     CDS             2786..3970
                     /gene="ubiM"
                     /locus_tag="WHR07_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-demethoxyubiquinol-8 5-hydroxylase UbiM"
                     /protein_id="HEZ2130005.1"
                     /translation="MSLHSDILVVGAGPAGLSFAAELAGSGLKVTLIERSPLTVLQNP
                     PYDGREIALTHFSREIMQRLGMWDKIPENEIYPLRDAKVLNGRSDYQLHFPQPTEARG
                     EPADCLGYLISNHNIRRAAYEVVSQLDNVSILTDTVVKEVKTSDNEAQVILENGKILT
                     ARLLLAADSRFSQTRRQLGISSDMHDYSRTMFVCRMKHTLSNQHTAYECFHYGRTIAL
                     LPLEEHLTNTVITVDTDKINSVQNLSPEELAASVKEQLKGRLGDMELVSSIHHYPLVG
                     MIAKRFYGKRSALIGDAAVGMHPVTAHGFNLGLSSADILAKLILEAEQRGQDIGASSL
                     LEKYSNKHMLHAHPLYHGTNMMLKLFTNETAPAKLLRGLVLRAGNNFPPLKKLITKQL
                     TG"
     gene            complement(4241..4396)
                     /gene="rpmG"
                     /locus_tag="WHR07_000764"
     CDS             complement(4241..4396)
                     /gene="rpmG"
                     /locus_tag="WHR07_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009766925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEZ2130006.1"
                     /translation="MRDKIKLESSAGTGHFYTTTKNKRTMPGKLEIKKFDPVARKHVV
                     YKETKLK"
     gene            complement(4428..4661)
                     /gene="rpmB"
                     /locus_tag="WHR07_000765"
     CDS             complement(4428..4661)
                     /gene="rpmB"
                     /locus_tag="WHR07_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007586227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEZ2130007.1"
                     /translation="MARVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESEN
                     RWVRLRVSNAALRTIDKVGIDVVLADLRARGEA"
     gene            complement(4911..6434)
                     /gene="farB"
                     /locus_tag="WHR07_000766"
     CDS             complement(4911..6434)
                     /gene="farB"
                     /locus_tag="WHR07_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     permease subunit FarB"
                     /protein_id="HEZ2130008.1"
                     /translation="MDYPPLKGAALAWITLSLGLAVFMEVLDTTIANVAVPVIAGNLG
                     AATTQGTWVITSFAVANAVSVPLTGFLAKRIGEVKLFTAAAVGFVITSWLCGIAPNLQ
                     ALVFFRILQGFIAGPLIPLSQSLLMASYPPAKRTLALALWAMTVVVAPVLGPILGGWI
                     SGNWHWGWIFFINIPIGIISAWITWKHLKYRETETVKMPTDYVGLTLMVVGIGALQMM
                     LDRGKELDWFASGEIITLGVTALVCLSYFIVWELGEKYPIVDLSLFKDRNFTVGVIAT
                     SLGFMVYMGTLTLLPLVLQTNLGYTSTWAGLAAAPVGILPVFLSPIIGRFGNKIDMRL
                     LVTASFLTFAFTFYWRTDFYADMDIGNVIWPQFWQGAGVAMFFLPLTTITLSHMKGGQ
                     IAAAGSLSNFLRVLMGGVGVSFVSTLWERREALHHTRFAEHITPYSATLHETAAHLSQ
                     QGISDIQTLGIINNTITQQGFIIGSNEIFMAGSLLFIIMIPVIWLAKPPFHNGGGGH"
     gene            complement(6458..7630)
                     /gene="farA"
                     /locus_tag="WHR07_000767"
     CDS             complement(6458..7630)
                     /gene="farA"
                     /locus_tag="WHR07_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     adaptor subunit FarA"
                     /protein_id="HEZ2130009.1"
                     /translation="MATHGDEVKIQNRQEADSAKAKRKRRLTALTLLFALAAAAAGSA
                     FFLWWQHEEETEDAYVAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVL
                     AYERAKNELIQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSA
                     EELAHARAAVSQAQAAVKAALAEESSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQ
                     RTQIRAPADGQVAKRSVQVGQQVAAGAPLMAVVPLSDVWVDANFKETQLRHMKIGQPA
                     ELVSDLYGKQIVYRGRVAGFSAGTGSAFSLIPAQNATGNWIKVVQRVPVRIVLNREDV
                     DRHPLRIGLSMTVKVDTSAAGAPVSKTPGAALPEMESTDWSEVDRTVDEILGQSAP"
     regulatory      7859..7903
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00522"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="PreQ1 riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF00522"
     gene            7907..8380
                     /gene="queF"
                     /locus_tag="WHR07_000768"
     CDS             7907..8380
                     /gene="queF"
                     /locus_tag="WHR07_000768"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HEZ2130010.1"
                     /translation="MSRNTEELQGISLLGNQKTRYPTGYAPEILEAFDNKHPDNDYFV
                     KFVCPEFTSLCPMTGQPDFATIYIRYIPHIKMVESKSLKLYLFSFRNHGDFHEDCVNI
                     IMKDLIALMDPKYIEVFGEFTPRGGIAIHPFANYGKAGTEFETLARKRLFEHDSQ"
     gene            8455..9141
                     /locus_tag="WHR07_000769"
     CDS             8455..9141
                     /locus_tag="WHR07_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HEZ2130011.1"
                     /translation="MYAFTAAQQQKALFWLVLFHILIIAASNYLVQFPFQIFGIHTTW
                     GAFSFPFIFLATDLTVRIFGSHLARRIIFWVMFPALLLSYVFSVLFHNGSWTGLGTLS
                     EFNTFVGRIALASFAAYALGQILDIFVFNKLRRLKAWWIAPTASTVIGNALDTLVFFA
                     VAFYASSDEFMAANWQGIAFVDYLFKLTVCGLFFLPAYGVILNLLTKKLTTLQTKQAQ
                     DRPAPSLQNP"
     gene            complement(9644..10936)
                     /locus_tag="WHR07_000770"
     CDS             complement(9644..10936)
                     /locus_tag="WHR07_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEZ2130012.1"
                     /translation="MAVFPLSAKHRKYALRALAVSIILVSAAYIASTERTERVRPQRV
                     EQKLPPLSWGGSGVQTAYWVQEAVQPGDSLADVLARSGMARDEIARITEKYGGEADLR
                     HLRADQSVHVLVGGDGGAREVQFFTDEDGERNLVALEKKGGIWRRSASEADMKVLPTL
                     RSVVVKTSARGSLARAEVPVEIRESLSGIFAGRFSLDGLKEGDAVRLIYDSLYFHGQQ
                     VAAGDILAAEVVKGGTRHQAFYYRSDKEGGGGGNYYDEDGRVLQEKGGFNIEPLVYTR
                     ISSPFGYRMHPILHTWRLHTGIDYAAPQGTPVRASADGVITFKGRKGGYGNAVMIRHA
                     NGVETLYAHLSAFSQAQGNVRGGEVIGFVGSTGRSTGPHLHYEARINGQPVNPVSVAL
                     PTPELTQADKAAFAAQKQKADALLARLRGIPVTVSQSD"
     gene            11014..11982
                     /locus_tag="WHR07_000771"
     CDS             11014..11982
                     /locus_tag="WHR07_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130013.1"
                     /translation="MKLTLAIPSLNLDKDETRIPLCLPAFNKILQYGSLHRQSCTASA
                     FYARYLWCGRLAERAAQSLNMPSETVALATPVWQKMGMHQANVLTAEYLDVGTDEAER
                     LCRDLSAFYGDIPWRFVPVLPELWLVSLPRAYRWGAKPVLDLGGLLGADDQPDGEDAL
                     EWLRVQTEIQMWLAAHPVNHNRKKRGLPELNGLWLWDSLHGSSQGGTLFADTVWSRFY
                     PDRRALPDNFRAYEETAAHLPDTHHILFMDDLRLTALTGDRERYASVLQQWEEHWFAP
                     IYEAVRTGKIKRLDITTDGQHGGTLTFKPADRWKFWRGAKTFDGIW"
     gene            complement(12183..13649)
                     /locus_tag="WHR07_000772"
     CDS             complement(12183..13649)
                     /locus_tag="WHR07_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ2130014.1"
                     /translation="MVIFYFCGKTFMPARNRWMLLLPLLASAAYAEETPREPDLRSRP
                     EFRLHEAEVKPIDREKVPGQVREKGKVLQIDGETLLKSPELLSRAMYSAVVSNNIAGI
                     RVILPIYLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDAPAVRMRLAA
                     ALFDNRQNEAAADQFDRLKAENLPPQLMEQVELYRKALRERDAWKVNGGFSVTREHNI
                     NQAPKRQQYGKWTFPKQVDGTAVNYRLGAEKKWSLKNGWYTTAGGDVSGRVYPGNKKF
                     NDMTAGVSGGIGFADRRKDAGLAVFHERRTYGNDAYSYTNGARLYFNRWQTPKWQTLS
                     SAEWGRLKNTRRARSDNTHLQISNSLVFYRNARQYWMGGLDFYRERNPADRGDNFNRY
                     GLRFAWGQEWGGSGLSSLLRLGAAKRHYEKPGFFSGFKGERRRDKELNTSLSLWHRAL
                     HFKGITPRLTLSHRETRSNDVFNEYEKNRAFVEFNKTF"
     gene            complement(13891..15896)
                     /locus_tag="WHR07_000773"
                     /pseudo
     CDS             complement(13891..15896)
                     /locus_tag="WHR07_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_180374912.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
BASE COUNT         3833 a         4587 c         3807 g         3669 t
ORIGIN      
        1 ccactatatc ataaaacaac agatttccaa gccggaacat cttttacgaa gcctgaaaat
       61 catttcatga ttctaccgtc ctaaaggtcg gtttttcaag caggaagaaa aggttttcag
      121 atggcaaaaa agccctccaa cactgaaagg ccttatatcg gaaacttccc gcaacacggg
      181 aaacagacaa atgcaaatcg tcaaacctcg ccaacaggaa tcgaacctgt attttacgct
      241 taggaggcat acgttctatc cgttgaacta tggcgagccg aaatgaaaag gagattttaa
      301 ccctttccga cgacaaaaga caagatgccg gccgcaatca gcggcccgac agggataccg
      361 cccataaatg ccaccccgat aaccgtcccg attaacagcc ctgtaattaa aacaggctgc
      421 tgtcccatca aaggcacgcc gcgtcccgcc agccaagcca cgaaaatacc gataaaaacg
      481 gcggatatca ttttaaaatt caaaaattcg gcaacgggag gaacctgcgc ctttcctgaa
      541 accaacggac tcaaaacccc tatggtcaaa agaatgatac cgagattcaa cccatgcttc
      601 tcgaccaacg ggacaaactg taccaatgcc gtctgctgca tcagcagcaa tatggttgcc
      661 gagatggtaa tcgaattgtt gttgctgacc acccccaaca gaatcagcgt aaccagaaac
      721 aggggaacaa aactgaaatt catcgcctca agacaccctg accaaagatt ccttcgccag
      781 ctgaatcatg gcatccttca cttcgctgtc gggcagggca tccaaggcgg taacggcaca
      841 atcgactgct ttgcgcgcct cgcctatcga atatgccaaa gcatccgaac ggacgacata
      901 atcgtggatt ttctcaaaat agctgcgatc tgcattttcc aaagcagtac gcacatcgtt
      961 cgcaacctgt tcggaaccct gacgcatcag ataaatcaaa ggcaaagtcg gttttccttc
     1021 cgccaaatcg tcgccgacgt ttttgccggt ttcttcggtt tcgccagaat agtccagcac
     1081 atcgtcaata atttggaatg ccgtaccgac atacataccg tagtctttca acgcccgttc
     1141 gtgttcgggg gaagccttgc ccaaaattgc gccgacttga gcggcagctt caaacaattt
     1201 tgccgtttta tattggatga cttggatata ttgttcttcg gtaatgtccg tattgccgat
     1261 gttcatcagc tgcatgactt cgccctcggc aataatgttg gttgcatccg ccatcacttc
     1321 caaaacgcgc atactgtccg agtcaaccat cagttgaaag gcgcgcgtgt ataaaaagtc
     1381 gccaaccaac actgccgccg cattgccgaa cagattgttt gccgttgccc gtccacggcg
     1441 caaatcgctt tcatcgacga catcgtcgtg cagcagcgtc gaagtgtgga taaattcgac
     1501 catcgccgcc agcgaataca gtttcccgtc atcataaccg accgccttac ccgccaaaat
     1561 cgtcataatc ggacgcaggc gtttgccgcc cgcgctgatg atatatgtac cgatttgcga
     1621 aatcagtgcg acatcggatt gcaccgcacg gttgatgact tcattgactt tggcaaggtc
     1681 ttcaggcaga tgtcgctgga aatagggcag attttcgagc atggcagact ctcaggttta
     1741 cgcttccatc aaacggcaga taccgcttga aagctgattc aaatagcggg caattatatc
     1801 agcaaagcca tcagggtaca tcttttcaga cggcatatgg ttatccgaac cgcgcaaact
     1861 ttgacaaaac aggcaaataa caatacaatg ccgagttccg cacaatggtg tgcggatatt
     1921 aaccataacc cttatggagt tgagtatgta cgcggtcgta aaaaccggcg gcaaacagta
     1981 taaagtttcc gtcggcgaaa aattgaaagt agaacagata ccagccgaac tcgacagcca
     2041 aatcgaactg accgaagttt tgatgattgc tgacggcgaa tctgtaaaag ttggcgcacc
     2101 ctttatcgaa ggtgcaaaag taacggctaa agtagtggca cacggtcgtg gcgaaaaagt
     2161 ccgcatcttc aaaatgcgcc gccgcaaaca ctaccaaaaa cgccaaggcc accgccaaaa
     2221 tttcacccaa atcgaaatcg tggcaatcgc ctaaccttaa aacttaggag cattacaaat
     2281 ggcaagtaaa aaagcaggcg gcagcacccg caacggtcgc gattcagaag ccaaacgctt
     2341 gggcgttaaa gcctacggca acgagctgat tcccgcaggt tccatcatcg tacgccaacg
     2401 cggtaccaaa ttccacgcag gcgacaacgt aggcatgggc aaagatcaca ctttgttcgc
     2461 caaagttgac ggttatgttg aattcaaaac caaaggtgcg ctgaaccgta aaactgtcag
     2521 catccgtcct tacaccggtt ctgaagaata atccaaccga tacctgaagc cgcatctttt
     2581 cacgatgcgg ctttttacat accccacacc cgatttgata cacattaagc tgaaagtaaa
     2641 aatccgcata catcctcccc tgcatatttc ttcaacagcg ggttttgata taatcgccta
     2701 tctgttacag atagttcaaa cggcattcaa acccttacaa atgccgtctg aaatcatcgg
     2761 catccgtcta tgcaaaggat attttatgag tttacacagc gacatcctcg tcgtcggcgc
     2821 aggcccggcg ggtttaagtt ttgcagccga acttgccggc agcggtttga aagttaccct
     2881 gatcgaacgc agcccactga ctgttctgca aaatcctcca tatgacggac gcgaaatcgc
     2941 cctgacccat ttttcccgcg aaatcatgca gcgtttgggt atgtgggaca aaattcccga
     3001 aaacgaaatc taccctttgc gcgatgccaa agtgctgaac ggacgttccg actaccagct
     3061 ccactttccc caaccgactg aagcgcgcgg cgaacctgcc gactgtttgg gctatctgat
     3121 ttccaaccac aatatccgcc gcgccgccta tgaagtcgta tcacaactcg acaatgtcag
     3181 cattctgacc gatacggttg tcaaagaagt caaaacatct gacaacgaag cacaagtcat
     3241 tttggaaaac ggcaaaatcc tgactgcacg cctgcttttg gcggcagaca gccgcttctc
     3301 gcaaacccgt cgacaactcg gtatctcctc cgatatgcac gattacagcc gaaccatgtt
     3361 cgtctgccgt atgaaacata ccctttccaa ccaacatacc gcttacgaat gcttccatta
     3421 cggacgcacc atcgcactgc tgccgctgga agagcacctg accaataccg tcattaccgt
     3481 cgataccgat aaaatcaaca gcgttcaaaa cctttcgccc gaagaattgg cggcaagcgt
     3541 aaaagaacaa ctcaagggta ggcttggcga catggaactg gtcagcagca tccaccatta
     3601 cccccttgtc ggtatgattg ccaaacgttt ctacggcaaa cgcagcgcgc tgatcggcga
     3661 tgcggctgtc ggtatgcacc ccgttaccgc acacggtttc aacttgggtc tgtccagcgc
     3721 agatattttg gcaaaactga tactcgaagc cgagcagcgc ggtcaggaca tcggcgcatc
     3781 ttccttgttg gaaaaataca gcaacaaaca tatgctgcac gcccatccgc tttatcacgg
     3841 aaccaatatg atgctgaaac tgtttaccaa cgaaaccgcg ccggcaaaac tgctgcgcgg
     3901 tttggtattg cgtgccggca acaacttccc gccgctgaaa aagctgatta ccaaacaact
     3961 gaccggttga aaactgccga aatgccgtct gaaacgtttc agacggcatt tttgtattat
     4021 agtggattaa caaaaatcag gacaaggcga cgaagctgca gacagtacaa atagtacgga
     4081 accgattcac ttggtgcttc agcaccttag agaatcgttc tctatccttg gcagacggtt
     4141 tgcagcagat tcgcatacgg cagatgtttc aagcggaaaa gaaacacgat aaaaataaaa
     4201 aagcctccga acagtcggag gctttgcttt caaactgaaa ttatttcagt ttggtttctt
     4261 tgtacactac gtgtttacgg gcaaccggat cgaatttttt aatttccagt ttgccgggca
     4321 tagtgcgttt gtttttggta gtggtgtaga agtgaccagt acctgcactg gattccagtt
     4381 tgattttatc gcgcattgca gtaatcctta attaaatagt gtttaaatta agcttcgccg
     4441 cgagcacgca aatcagccaa tacgacatca atgcctactt tgtcgatggt acgcagtgca
     4501 gcgttggaaa cgcgcaggcg aacccagcgg ttttcacttt ctacccaaaa acgacgtgat
     4561 tgcaagttgg gcaaaaaacg gcgtttggtt ttgttgttgg cgtgcgatac gttgttgccg
     4621 gacatcgggc gtttgccggt cactttgcaa actcgtgcca taatcagtct ccaaacttct
     4681 aaaatagtaa aacgcgattt ataccacgaa aaacagtgtt agttcaagtg ttttaaagaa
     4741 aaacggctgt tttgcgcgga taatccttcc gattgtcgca tctgtggaac gtttgcaggt
     4801 gcgaaacaga tggggcgcga ttatagcgga tttcgggaac tgctgcattc aaaatgccgt
     4861 ccgaacatat ttccagtatt ttcagacggc atttcaagtt ttcaaatccc tcaatgtcca
     4921 ccgccgccgt tgtggaacgg cggttttgcc agccatatga caggaatcat gatgatgaac
     4981 agcaggctgc ctgccataaa gatttcattc gatccgatga tgaagccctg ctgggtaatg
     5041 gtattgttga tgatacctag ggtttgaatg tcggaaatgc cttgttggga caaatgcgcc
     5101 gccgtttcgt gcaatgttgc ggaatagggc gtgatgtgtt cggcaaagcg tgtgtggtgc
     5161 aacgcttcgc gccgttccca cagggtactg acgaatgata cgccgacacc gcccatcagc
     5221 acgcgcaaga aattcgacag gctgccggcg gcggcaatct gtccgccctt catatgcgac
     5281 agtgtgatgg tggtcagcgg caggaagaac atggcaacgc ctgccccctg ccaaaactgc
     5341 ggccagatga cgttgccgat atccatgtcg gcataaaaat cggtgcgcca atagaaagtg
     5401 aaggcaaaag tcaggaagct ggcggttacg agcaggcgca tatcgatttt attgccgaac
     5461 ctgccgataa tgggggacag gaaaactggg aggatgccga cgggcgcggc ggcaagccct
     5521 gcccacgtgg aggtatagcc caggttggtc tgcaacacta acggcagcag ggtcagcgtc
     5581 cccatataca ccataaaacc caatgacgtg gcaatgacgc cgacggtaaa attccgatct
     5641 ttaaacagcg ataaatcgac aatcggatat ttttctccca attcccaaac aataaaatac
     5701 gacaagcaca ccaatgcggt tacgcccaag gtaatgattt ctcccgaagc gaaccagtcg
     5761 agttccttac ccctgtccag catcatctgt aacgcgccga taccgactac catcaatgta
     5821 agcccgacat agtcggtcgg cattttaacg gtttccgttt cccgatattt caaatgtttc
     5881 catgtaatcc atgccgatat gatgccgatg gggatgttga tgaagaaaat ccaaccccaa
     5941 tgccagtttc cggaaatcca gccgccgagt atcggcccga gaacaggggc gacaacgacg
     6001 gtcattgccc acaatgccag tgccagcgtc cgttttgcgg gcggatagga tgccattaac
     6061 aggctttgcg acaggggaat cagcggcccg gcgataaagc cctgcaaaat gcggaaaaac
     6121 accaaagcct gaaggttggg cgcgatgccg cacagccacg atgtgatgac gaaaccgacg
     6181 gcggcggcgg taaacaattt gacctcgccg atacgttttg ccaaaaagcc cgttaacggc
     6241 acggaaacgg cgtttgccac agcaaaagaa gtaatgaccc acgtcccctg cgtggttgcc
     6301 gcaccgaggt tgccggcgat aacgggaacg gcgacattgg cgatagtcgt atctaaaact
     6361 tccataaata cggcaagccc caaagacagc gtaatccatg ccaatgccgc acccttaagc
     6421 ggtggataat ccattgtgtc ctccgtttca gacggcatca gggcgcggat tgcccgagga
     6481 tttcatcgac cgtccgatcg acttccgacc agtcggtact ttccatttcc ggcaatgccg
     6541 cacccggcgt ttttgaaaca ggcgcgcctg cggcagaagt atccacttta accgtcatcg
     6601 acaaaccgat gcgcaaggga tgcctgtcca catcttcgcg gttcagcacg atacggacgg
     6661 ggacgcgctg caccacttta atccagttgc ccgttgcgtt ttgcgccgga atcagcgaaa
     6721 acgcgctgcc cgtacctgcc gaaaaccctg ccaccctgcc gcgataaaca atttgtttgc
     6781 cgtacaaatc ggacaccagc tcggcaggct gtccgatttt catatgccgc aactgcgtct
     6841 ctttaaaatt ggcatccacc cacacatccg acagcggcac caccgccatc agcggcgcgc
     6901 ctgccgccac ctgctgcccg acctgcaccg aacgcttcgc cacctgaccg tccgccggcg
     6961 cgcggatttg cgtccgctga aggttcaacc acgcatcttt caacctgccg attgccgtct
     7021 gaaccgccgg ctgttcgcgc aaagaaacct gaccgcccaa agccgcgcgt gccgaagatt
     7081 cttccgccaa agccgctttg accgccgcct gcgcctgaga cactgccgca cgggcgtgtg
     7141 ccagctcttc ggcggacacc gcgcccgatt ccgccaaagc agaccggcgg cgcaaatcat
     7201 cctgcgcgcg tgccaaatcc gcacggcgca aggcaacctg cgcccccgcc tgcgaagtgg
     7261 cggcattttg ccggcggttt tgccgcaccg cctgaatcag ctcgtttttt gcccgctcgt
     7321 aagccagcac atcattatcg tcgtccaata ccgccagcac gtcgcctttt ttcacggcat
     7381 ccgtatcgtc gtgcaaaacc ttccgcaccg taccgccctt ttgcggcgta acctgaacca
     7441 cgcgcccagc aacataagcg tcttccgttt cttcttcgtg ctgccaccat aaaaaaaacg
     7501 ccgacccggc ggctgcggcg gcaagcgcga acagcagcgt caatgccgtc aggcggcgtt
     7561 tgcgtttggc ttttgcgcta tcggcttctt gtctgttttg aattttcact tcgtctccgt
     7621 gtgttgccat tattccaatt ccgaatattt ttaatacgat ataaataaag ccgatcaaag
     7681 gcagctcgga ttctataccc tggcaataac ccaatcaagt taatgattta gaatgaatat
     7741 tcaaataaac cgccacaccc gcgttccgca aaattaattt atgttcaaaa ataatcggat
     7801 aagcgcgccg taccgggcgg ggacgctaca cagataccgc cgcttatatt acaatcgtcg
     7861 ccccgtggtt cgaaaacctc ccacactaaa aaactaagga aaccctatgt cccgcaatac
     7921 cgaagagctg caaggcatct cgcttttggg taatcaaaaa acccgatatc cgaccggcta
     7981 cgcgcctgaa attctcgaag cattcgacaa caaacatccc gacaacgact atttcgtcaa
     8041 attcgtctgc ccagagttca ccagcctctg ccccatgacc gggcagcccg acttcgccac
     8101 catctacatc cgctacattc cgcacatcaa aatggtggaa agcaaatccc tgaaactcta
     8161 cctcttcagc ttccgcaacc acggcgattt tcatgaagac tgcgtcaaca tcatcatgaa
     8221 agacctcatt gccctgatgg atccgaaata catcgaagta ttcggcgagt tcacaccgcg
     8281 cggcggcatc gccattcatc ctttcgccaa ttacggcaaa gcaggcaccg agttcgaaac
     8341 attggcgcgt aaacgcttgt tcgaacacga cagccaataa accatccttc ccatatttca
     8401 gacggcattc cttcgatacg atatgccgtc tgaacgcctt tccgaaagat ttttatgtac
     8461 gcatttactg ccgcacagca acagaaggca ctcttctggc tggtgctttt ccatatcctc
     8521 atcatcgccg ccagcaacta tctggtgcag ttccccttcc aaattttcgg catccacacc
     8581 acttggggtg cgttttcctt tcccttcatc ttcctcgcca ccgacctgac cgtccgcatt
     8641 ttcggttcgc acttggcacg gcggattatc ttttgggtga tgttccccgc ccttttgctt
     8701 tcctacgtct tttccgtttt gttccacaac ggcagttgga caggcttggg cacactatcc
     8761 gaattcaaca cctttgtcgg acgcatcgcc ttggccagct ttgccgccta cgcgctcgga
     8821 caaatccttg atatttttgt gttcaacaaa ttacgtcgtc tgaaagcgtg gtggattgca
     8881 ccgaccgcat caaccgtcat cggcaatgca ctggacacgt tagtgttttt tgccgttgcc
     8941 ttttacgcca gcagcgatga atttatggcg gcaaactggc agggcatcgc ttttgtcgat
     9001 tacctgttca aacttaccgt ctgcggtctg tttttcctgc ccgcctacgg cgtgattctg
     9061 aatctgctga cgaaaaaact gacaaccctg caaaccaaac aggcgcaaga ccgccccgcg
     9121 ccctcgctgc aaaatccgta aaacagccct gccgggaatc gggacggttg ggttttcttt
     9181 tatttgcaaa cactgtcgga acggataaat ccggattccc gcccacttcg tcattcccgc
     9241 gaaagcggga atccggtacg ttgggtttca gtcatttccg ataaactcct accgcattgt
     9301 atttctagat tcccgctttc gcgggaatga cggcggatgg gtttccgtgc cgtggtgtcc
     9361 ggattcccga cggtacggga atgacggcag tgcttcctta acttagtttt attttaatcg
     9421 actgtatggt ggattaacaa aaatcaggac aaagcgacga agccgcagac agtacaaata
     9481 gtacgaaacc gattcacttg gtgcttcagc atcttagaga atcgttctct ttgagctaag
     9541 gcgaggcaac gacgtactgg tttttgttaa tccactataa atgccgtctg aaaacctgtt
     9601 tgcaggtttt cagacggcat tgttttcgtc gccggttcaa acttcaatcc gattgcgaca
     9661 cggtaaccgg tatgccgcgc aagcgcgcaa gcagcgcgtc cgccttctgt ttctgcgcgg
     9721 caaacgccgc cttgtccgcc tgcgtcaatt cgggtgtcgg caatgcgacc gaaacaggat
     9781 tgacgggctg cccattgatg cgcgcctcgt aatgcaggtg cggccccgtc gaacgcccgg
     9841 tagaaccgac aaaaccgatg acctcgccgc cgcgcacatt gccttgtgcc tgcgaaaacg
     9901 cgctcaagtg cgcatacagc gtttccacac cgttggcgtg gcgtatcatc accgcgttgc
     9961 cgtagccacc cttccggcct ttaaaggtaa tcacgccgtc ggcggaagcc ctgaccggcg
    10021 ttccctgcgg tgcggcataa tcgatgcccg tgtgcagccg ccaagtgtgc aggatggggt
    10081 gcatacggta gccgaacggc gaagaaatgc gcgtatagac cagtggctcg atgttgaagc
    10141 cgcctttttc ctgcaacacc ctgccgtctt catcgtaata attgccgccc cctcctcctt
    10201 ccttgtccga acggtaatag aacgcctgat gccttgtgcc gcccttaacg acttccgccg
    10261 ccagaatatc gcccgccgcc acctgctgcc cgtggaaata caggctgtcg taaatcaggc
    10321 gcacggcatc gccttccttc aaaccatcaa ggctgaagcg gccggcgaaa atcccgctta
    10381 aggattcgcg aatttcgacg ggcacttccg cccgcgccag cgaaccgcgc gccgacgttt
    10441 tgaccacgac cgaacgcagc gtcggcaaaa ccttcatatc cgcctcagaa gccgaccgcc
    10501 gccatatgcc gccttttttt tccaaagcga ccagattgcg ctcgccgtct tcgtcggtaa
    10561 aaaactgcac ttcgcgcgcg ccgccgtcgc cgccgaccaa aacatgaacc gactggtcgg
    10621 cacgcaaatg ccgcaaatcg gcttcgccgc catatttttc cgttattcgg gcaatttcgt
    10681 cccgcgccat acccgaacgc gccagcacgt ccgccagcga gtcgcctggc tgcaccgcct
    10741 cctgcaccca atatgccgtc tgaacaccgc tgccgcccca agacagcggc ggcagttttt
    10801 gttccacgcg ctgcggtctg acgcgctccg tcctctctgt cgaagcaatg tatgccgccg
    10861 acaccaaaat aatcgaaacg gcaagcgcgc gcagcgcgta tttccgatgt tttgccgaaa
    10921 gtgggaagac agccatattg ttcctttttg acggcgtttg cgccgaatcc tctataatgt
    10981 tgcgcctgac ctgcatttct gaaacgtcaa acgatgaaac tcaccctcgc cattccctcg
    11041 ctcaatttgg ataaagacga aacccgaata cctctatgcc tgcccgcctt caacaaaatc
    11101 ctgcaatacg gctcgctgca ccgccaaagc tgcacggctt cggcatttta cgcgcgttat
    11161 ttgtggtgcg gcagactggc ggaacgcgcg gcacaaagcc tgaatatgcc gtctgaaacc
    11221 gtcgcgctcg ccacgcccgt ctggcaaaag atggggatgc atcaggcaaa tgtgctgacg
    11281 gcggaatatt tggatgtcgg tacggatgaa gcggaacggc tctgccgcga tctgtcggcg
    11341 ttttacggcg atattccgtg gcgtttcgtt cccgtcctgc ccgaattatg gctggtttcc
    11401 cttccccgcg cgtaccgctg gggcgcgaag cccgttttgg acttgggcgg actgttgggt
    11461 gcggacgatc aaccggacgg ggaagacgcg ttggaatggc tgcgcgtcca aaccgaaatc
    11521 caaatgtggc tggcggcgca ccccgtcaac cataaccgca agaaacgcgg gctgcccgag
    11581 ttgaacggct tatggctttg ggacagtctg cacggaagca gtcaaggcgg cacgcttttc
    11641 gccgatacgg tttggagccg tttctacccc gaccgccgcg cattgcccga caacttccgc
    11701 gcctatgaag aaacggcggc acacctgccc gacacgcacc atatcctgtt tatggacgat
    11761 ttgcgcctga ccgccctgac aggggacagg gagcggtatg catcggtttt acagcagtgg
    11821 gaagaacact ggttcgcacc gatctacgaa gccgtccgta ccggcaaaat caaacggctg
    11881 gacatcacca cggacggaca acacggcggt acgctgacct tcaaacccgc cgacaggtgg
    11941 aaattttggc gcggcgcgaa aacctttgac ggaatctggt gaacccgccc gccgcaaccg
    12001 cgacaatgcc gtctgaagcc cgaatcgggt ttcagacggc attttacctc gcatcgccgt
    12061 tatgccggaa aaaccggaat gcgtttccgc acacgcggcg gcacgcaaag caccgcccga
    12121 aagccgccga tgcccgccgt gataccgccg ccggcagggt ttcctccgaa aaggaacagc
    12181 aatcagaacg ttttattaaa ctcgacaaac gcccgatttt tctcgtattc gttgaacaca
    12241 tcgttactcc gcgtttcgcg gtgcgacaac gtcaggcgcg gcgtgatgcc tttgaaatgc
    12301 aatgcccggt gccaaaggct caaggatgtg ttcaattctt tatccctgcg cctttcccct
    12361 ttaaaaccgc tgaaaaagcc gggtttttca taatgccgtt tcgccgcgcc gaggcgcaac
    12421 agcgaagaca ggccgctgcc gccccattcc tgcccccagg caaagcgcag gccgtaacgg
    12481 ttgaaattgt cgccccggtc ggcggggttg cgctcgcggt aaaaatccaa accgcccatc
    12541 caatattggc gcgcattccg gtaaaacacc agcgaattgg aaatttgcaa atgggtattg
    12601 tcggaacgcg cccggcgcgt attcttcaaa cgcccccact ccgccgaaga caacgtttgc
    12661 catttcgggg tttgccaacg gttgaaataa aggcgtgcgc cgttggtgta agaataagcg
    12721 tcgttgccgt aggtgcggcg ttcgtggaac actgccagcc cggcatcttt gcgccggtcg
    12781 gcaaaaccga tgccgccgga aacgcctgcc gtcatatcgt tgaatttctt attccccgga
    12841 taaaccctgc cggacacgtc gccgcccgcc gtcgtgtacc agccgttttt cagcgaccat
    12901 tttttctccg cgccgagccg gtaattgacc gccgtgccgt ccacctgttt cgggaaagtc
    12961 catttgccgt actgctgccg tttcggggct tggttgatat tgtgttcgcg ggtaacgctg
    13021 aagccgccat ttaccttcca cgcatcgcgt tcgcgcaatg ccttgcggta cagctcgacc
    13081 tgctccatca gctgcggcgg caggttttcc gccttcaggc ggtcgaactg gtctgccgcc
    13141 gcctcgttct gcctgttgtc aaacaatgcc gccgccaaac gcatacggac ggcgggcgcg
    13201 tcgggttggg cggcaatcaa ttcccggtaa tgggaaatcg cctccttcac cctaccgtct
    13261 gcctgcgcca aaatcccttg tgcataaagt gccaacatct tatcctgctg cgcctgttgt
    13321 aggtaaatcg gcaaaataac gcggataccg gcaatattgt ttgagaccac tgcggaatac
    13381 atcgcgcggg acaacaattc gggacttttc agcagggttt ctccgtcaat ctgcaaaact
    13441 tttccttttt cccgcacctg ccccggtacc ttctccctgt cgattggttt gacctccgct
    13501 tcatgaagcc tgaactcggg acggcttctc aaatccggtt cgcgcggtgt ttcttcggca
    13561 tatgccgcac ttgccaataa aggcagcagc agcatccatc tgtttcgtgc aggcataaat
    13621 gtcttcccac aaaaataaaa aataaccatt atcaatcggc ggattgtatc agttttttat
    13681 gccgctgttc caaaccctgc cgcccgatgc cgcgacaatg ccgtctgaag ccagaatcgg
    13741 gtttcaaacg gcggcaaaaa accggcggtt ttccgccggt ttcatcatta tgccccgccc
    13801 ttcggggcag cagggttcgg attggtttgc ggggcggcgt gcggtgccgt gccggtgtgc
    13861 cgcctgtacg tcaaaacatt tcccgacgca tcaaaacagc catttgagcg acaatgcggc
    13921 ttctttgtcg ccgtccgtcc ttttgccgta tccgatgcgt gcggacatat gacctttcca
    13981 accggcttca atgccgaacc gcccttcgag cgccgtcctg cctgccagcg tctgtttttc
    14041 gccgtccatt tccacgccga aagattttga cctgtgcaaa acattaaaag cggcaaaagg
    14101 ctgaagattg acaccattac gcaaagcaaa acggtttttt gcccgaatgc cggcgcggct
    14161 ttgccactga ccgctgccga gcagtccgac ccccgtcccc tcgctgtcgg taaagccgcc
    14221 gtttacgccc aagtaggtaa actgcgcctg cggttgcagg taaaaccgca cattattgcc
    14281 ttttccgaca actccttccg ccacaagcgt gttgtagccg ccttcgacag aagccgtcca
    14341 acctttggtt ttgtagcgtt ccgcacggtt ttcatcattg atgcggtgtt tgaaacgttg
    14401 gtattgcaac cagccgtcca aatacgcacc cgtttgttta tcgcgcaact gatgccacgc
    14461 agcataaaca cccccgccat aaccatgcaa atcactgcct gccgcaccgc ctttgctgtt
    14521 aactgatgcg tgctggccga ccctgccgcc catcacgccg attgccagcc ggctgccttc
    14581 attttgccgt acaaacacct cgccgccgat ttgcacgcct ttgcgccgcc cgtccgcagc
    14641 cgcgccaccc cgtatatttt gacgggacgg atcggcggca tacacgtcgt cgcccctgtc
    14701 ggcggcacgc agcccaaaca aagtatttgc cgcataagcc tgttgggcat ataaaaccgc
    14761 ttccgcctcg gggatagcca aacgctgcac gcccaagcaa aatccgcctt cgcattgctt
    14821 gagcaataat tcgtacagtc cctgccggta attttgttta aacgcaaacg aaccggaatc
    14881 cgccgttttt gccgcaatca gtttgcgccc gtcgagcgtt ttcagatttt ccggccggcg
    14941 ttccaaaacc acgccggatt gtccgctgac tttgtcttca aaggtcaggg cgggttcgtc
    15001 cgactcccgc acgtcgtagc cgaacaggaa atccgcgccg cccgcataat ccttatggac
    15061 ggtcagtttt tcatctttcg tgttcaggcg gatgcgggca ttatcggaag tttccagcgt
    15121 atggatgtcg gaatggcggc gcggttccca aagggaatct ttcagcgtca tcttggtcag
    15181 ttccaacacc tgtccggcga cgtgggattt gttttcgatt ttgacgtgta attttttatt
    15241 gaagatgttg ttgagactag tctgtgatgt attactatga ggagtgagta cggaatcttc
    15301 taccaattta ttaattaaat cggggttttt ctgtttgagt atactaaatt ttggtccaag
    15361 ctgttctata tacgcctcct cagtccgttt tttattttct tcccaagctt cgggtcttgt
    15421 tttgtataaa tcctgtaatt gcttcttaac cgcatccttt aaattatccc cgtaagtatc
    15481 tgtaatatat ttcttaacaa cgggcatatt atcgacggcg agtatgccgc tattgtagtt
    15541 tttaccttgg atattgattt cgtcataccc atattcggat gaattttgat cggttttacc
    15601 gctggaaaaa taatgggaag tgccgggttt cggcttgtct gaaaatgaaa aatcggcatc
    15661 gtcgccgatt ttggtagaac gagtatttga accaagctga gctctgaaca taccgaagca
    15721 atcaaaagat atgctgcacg ggccgcgcca aacgtgggaa tttctgtctt ccgccgcttc
    15781 taaaataaat ttgtttttaa tctcggcttc tttgacggga tcgtacgcat ccgaacctca
    15841 aacatatggc gtgcaaaaca gcgataaaac agataatgtt aatagattaa cccgac
//
LOCUS       DAWGKF010000035        15618 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.035, whole genome shotgun sequence.
ACCESSION   DAWGKF010000035 DAWGKF010000000
VERSION     DAWGKF010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15618)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15618)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15618
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.035"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            582..1457
                     /gene="prpB"
                     /locus_tag="WHR07_000774"
     CDS             582..1457
                     /gene="prpB"
                     /locus_tag="WHR07_000774"
                     /EC_number="4.1.3.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylisocitrate lyase"
                     /protein_id="HEZ2130015.1"
                     /translation="MSQHSAGARFRQAVKESNPLAVAGCVNAYFARLATQSGFKAIYL
                     SGGGVAACSCGIPDLGITTMEDVLIDARRITDNVDTPLLVDIDVGWGGAFNIARTIRN
                     FERAGVAAVHIEDQVAQKRCGHRPNKAIVSKDEMVDRIKAAVDARVDENFVIMARTDA
                     LAVEGLDAAIERAQACVEAGADMIFPEAMTDLNMYRQFADAVKVPVLANITEFGSTPL
                     YTQSELAENGVSLVLYPLSSFRAASKAALNVYEAIMRDGTQAAVVDSMQTRAELYEHL
                     NYHAFEQKLDKLFQK"
     gene            1543..2697
                     /gene="prpC"
                     /locus_tag="WHR07_000775"
     CDS             1543..2697
                     /gene="prpC"
                     /locus_tag="WHR07_000775"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HEZ2130016.1"
                     /translation="MTETTQTPTFKPKKSVALSGVAAGNTALCTVGRTGNDLSYRGYD
                     ILDLAQKCEFEEVAHLLIHGHLPNKFELAAYKTKLKSMRGLPIRVIKVLESLPAHTHP
                     MDVMRTGVSMLGCVHPERESHPESEARDIADKLIASLGSILLYWYQYSHNGKRIEVES
                     DEETIGGHFLQLLHGKRPSESHIKAMHVSLILYAEHEFNASTFTARVIAGTGSDMYSS
                     ITGAIGALKGPKHGGANEVAYDIQKRYRNADEAEADIRERIGRKEIVIGFGHPVYTIS
                     DPRNVVIKEVARGLSKETGDMRLFDIAERLESVMWEEKKMFPNLDWFSAVSYQKLGVP
                     TAMFTPLFVISRTTGWSAHVLEQRKDGKIIRPSANYTGPEDLAFVEIEER"
     gene            2790..3512
                     /locus_tag="WHR07_000776"
     CDS             2790..3512
                     /locus_tag="WHR07_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HEZ2130017.1"
                     /translation="MDKDKGSYAGIPVQNTKELVWQKIQDIPISECGEPLVSVGNTGR
                     IRVNPVYFSQGIEGAINSVLLRRSVADRLTQVVSLLPEVYGLEIFDGWRPVIVQRALR
                     ENMKQEIEKRHPEYDEVQVREALDCFAADPDRAGMPLPHLTGGSVDVGLFDIKSGKSL
                     DMGSEFDATGHLSYSDALEKEGEYFSSARNLRRILIHAMKEAGFSNLPTEWWHFDYGN
                     QNWAYFTQQSNAVFGAVEEQDT"
     gene            3538..4743
                     /locus_tag="WHR07_000777"
     CDS             3538..4743
                     /locus_tag="WHR07_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF819 domain-containing protein"
                     /protein_id="HEZ2130018.1"
                     /translation="MQTLISADNHLLLWAFVMLAAAAAIFIEQNSRLAGKVPGAVLAL
                     LIALIASNLGVIPTDAPVFDAVWSYIVPLAIPLLLFQLDLHALFKESGRMLFIFLISS
                     LGTVIGTLVSFALLKNYIPELDKVAGMISASYTGGGVNFAAMSAKLNPAKDVIAATIV
                     ADNLMMACYFFILIGISSSYWVRKVWGSPYQDKLEQEYHDPSVNKAAEYWKPKSISLQ
                     SIALSLAASILLVAVSFSLSSFLQNHFQSVDGVALKMLTGLISDKYLLLTTFTLAVVL
                     FFRKGIQKLDGSQELGTYCIYLFFVVIGVPASIPLIIKTAPLLFVFTLIIAVLNLLLT
                     LVLGKLFKFSIEEIVLACNANIGGPTTAAALAISKGWRDLVGAILLIGTVGYIIGNYI
                     GSFVYALLS"
     gene            4846..7452
                     /gene="acnD"
                     /locus_tag="WHR07_000778"
     CDS             4846..7452
                     /gene="acnD"
                     /locus_tag="WHR07_000778"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe/S-dependent 2-methylisocitrate dehydratase
                     AcnD"
                     /protein_id="HEZ2130019.1"
                     /translation="MAANQRYRKPLPGTDLEYYDARAACEDIKPGSYDKLPYTSRILA
                     ENLVNRADKVDLPTLQSWLGQLIEGKQEIDFPWYPARVVCHDILGQTALVDLAGLRDA
                     IAEKGGDPAKVNPVVQTQLIVDHSLAVECGGYDPDAFRKNREIEDRRNEDRFHFINWT
                     KTAFENVDVIPAGNGIMHQINLEKMSPVVQVKNGVAFPDTCVGTDSHTPHVDALGVIS
                     VGVGGLEAETVMLGRASMMRLPDIVGVELNGKRQAGITATDIVLALTEFLRKERVVGA
                     FVEFFGEGARSLSIGDRATISNMTPEFGATAAMFAIDEQTIDYLKLTGRDDAQVKLVE
                     TYAKTAGLWADALKTAVYPRVLKFDLSSVTRNMAGPSNPHARFATADLASKGLAKPYE
                     EPSDGQMPDGAVIIAAITSCTNTSNPRNVVAAALLARNANRFGLKRKPWVKTSFAPGS
                     KVAEIYLKEAGLLPEMEKLGFGIVAFACTTCNGMSGALDPKIQKEIIDRDLYATAVLS
                     GNRNFDGRVHPYAKQAFLASPPLVVAYALAGSIRFDIENDVLGVADGKEIRLKDIWPA
                     DEEIDAVVAEYVKPQQFRDVYVPMFDTGTAQKAPSPLYDWRPMSTYIRRPPYWEGALA
                     GERTLSGMRPLAILPDNITTDHLSPSNAILASSAAGEYLAKMGLPEEDFNSYATHRGD
                     HLTAQRATFANPKLFNEMVRNEDGSVRQGSLARVEPEGQTMRMWEAIETYMNRKQPLI
                     IIAGADYGQGSSRDWAAKGVRLAGVEAIVAEGFERIHRTNLIGMGVLPLQFKPGTNRH
                     TLQLDGTETYDVVGERKPRCDLTLVIHRKNGETVEVPVTCRLDTAEEVLVYEAGGVLQ
                     RFAQDFLEGNAA"
     gene            7805..8974
                     /gene="prpF"
                     /locus_tag="WHR07_000779"
     CDS             7805..8974
                     /gene="prpF"
                     /locus_tag="WHR07_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylaconitate cis-trans isomerase PrpF"
                     /protein_id="HEZ2130020.1"
                     /translation="MPQIKIPAVYYRGGTSKGVFFKRSDLPEAAREAGSARDKILLRV
                     LGSPDPYGKQIDGLGNASSSTSKAVILDKSERADHDVDYLFGQVSIDKPFVDWSGNCG
                     NLTAAVGAFAIEQGLVDKSKIPSDGICTVKIWQKNIGKTIIAHVPMQHGAVLETGDFE
                     LDGVTFPAAEVQIEFLDPADGEGSMFPTGNLVDEIDVPNIGRLKATLINAGIPTIFLN
                     AVDLGYTGKELQDDINNDAAALEKFEKIRAYGALKMGLISDVSEAAARAHTPKVAFVA
                     PAADYTASSGKTVNAADIDLLVRALSMGKLHHAMMGTASVAIATAAAVPGTLVNLAAG
                     GGTRKEVRFGHPSGTLRVGAAAECQDGQWTATKAVMSRSARVMMEGWVRVPEDCF"
     gene            9388..10587
                     /locus_tag="WHR07_000780"
     CDS             9388..10587
                     /locus_tag="WHR07_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEZ2130021.1"
                     /translation="MSDQLILVLNCGSSSLKGAVIDRKSGSVVLSCLGERLTTPEAVI
                     TFNKDGNKRQVPLSGRNCHAGAVGMLLNELEKHGLHDRIKAVGHRIAHGGEKYSESVL
                     IDQAVMDELNACIPLAPLHNPANISGILAAQEHFPGLPNVGVMDTSFHQTMPERAYTY
                     AVPRELRKKYAFRRYGFHGTSMRYVAPEAARILGKPLEDIRMIIAHLGNGASITAIKN
                     GKSVDTSMGFTPIEGLVMGTRCGDIDPGVYSYLTSHAGMDVAQVDEMLNKKSGLLGIS
                     ELSNDCRTLEIAADEGHEGARLALEVMTYRLAKYIASMAVACGGVDALVFTGGIGENS
                     RNIRAKTVSYLDFLGLHIDTKANMDKRYGNSGIISPTDSSPAVLVVPTNEELMIACDT
                     AELAGIL"
     gene            10694..11314
                     /locus_tag="WHR07_000781"
     CDS             10694..11314
                     /locus_tag="WHR07_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HEZ2130022.1"
                     /translation="MAQFFAIHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKL
                     GDKAAMERILSIRKIDLKHHLTLMCADLSELGTYAKIDNVQFRQLKAATPGPYTFILQ
                     ATKEVPARTLHPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEI
                     RERLEHAVDLVIDGGWCGTEPTTVIDMTDGTELVRQGCGDTAVFGL"
     gene            complement(11476..11919)
                     /locus_tag="WHR07_000782"
     CDS             complement(11476..11919)
                     /locus_tag="WHR07_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEZ2130023.1"
                     /translation="MYLTQHTDYGLRVLIYTAINDDALVNISTIAVTYGISKSHLMKV
                     VTALVKGGFLHSVRGKGGGLRLAAPPDRINIGSVVRHLEPMQLVECMGENNECLITPS
                     CRLTGILGGAMKSFFTYLDGFTLQDLLNKPTYDLLYEPRIPIAVQ"
     gene            12093..12461
                     /locus_tag="WHR07_000783"
     CDS             12093..12461
                     /locus_tag="WHR07_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEZ2130024.1"
                     /translation="MKPLKRHPALIGLSRDHHHSLSLCVRLLRTPEERHRDELEPHFA
                     ELETHFREEEAKFAPIWQNVAPELKQRFEKDHARLRQMMASPEYGNAAWNTAFATTLR
                     DHARFEERELFPAAEPFLPA"
     gene            12506..13660
                     /locus_tag="WHR07_000784"
     CDS             12506..13660
                     /locus_tag="WHR07_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HEZ2130025.1"
                     /translation="MKFTKHPVWAMAFRPFYSLAALYGALSVLLWGFGYTGTHELSGF
                     YWHAHEMIWGYAGLVVIAFLLTAVATWTGQPPTRGGVLVGLTIFWLAARIAAFIPGWG
                     ASASGILGTLFFWYGAVCMALPVIRSQNQRNYVAVFALFVLGGTHAAFHVQLHNGNLG
                     GLLSGLQSGLVMVSGFIGLIGTRIISFFTSKRLNVPQIPSPKWVAQASLWLPMLTAML
                     MAHGVMPWLSAAFAFAAGVIFTVQVYRWWYKPVLKEPMLWILFAGYLFTGLGLIAVGA
                     SYFKPAFLNLGVHLIGVGGIGVLTLGMMARTALGHTGNPIYPPPKAVPVAFWLMMAAT
                     AVRMVAVFSSGTAYTHSIRTSSVLFALALLVYAWKYIPWLIRPRSDGRPG"
     gene            complement(13717..14589)
                     /locus_tag="WHR07_000785"
     CDS             complement(13717..14589)
                     /locus_tag="WHR07_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HEZ2130026.1"
                     /translation="MPILNHIALIGVGLIGGSFVLDLKRQGLVRTVTGIDTDRDNLER
                     ALERGVIDRASVAIDADSIGGADLVLIATPVATVPAILTALRPVLPEHTWISDVGSTK
                     SSVIEAFRRCLPDRLHHCIAAHPIAGSDRSGAQAAQFGLFRHRKLIITPHGGEHSDGI
                     ALVEELWHAVGAEIYTMDAQRHDAVFAAVSHMPHLTAFAYVHQILDHPDGQEYLKFAA
                     TGFRDFTRIASGHPAVWADICLANKDSLLQLVQGLGKQLDVLANILTTDDREALYRYF
                     EEAKTTRDRWLDGN"
     gene            14674..15486
                     /locus_tag="WHR07_000786"
     CDS             14674..15486
                     /locus_tag="WHR07_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HEZ2130027.1"
                     /translation="MDKIRVAAVQMVSGVSPETNVAAMKRLVARAAEQGVDWVLLPEY
                     WVLMGANDTDKLALAEPLGGGRFQTALSETAKECGVVLFGGTVPLQSPEAGKVMNTLL
                     VYGRDGKRTGLYHKMHLFGFSGLGERYAEADTISAGREVPHLSAEGVSVAAGICYDVR
                     FPEFFRRQLPFDVLMLPAAFTHTTGKAHWELLLRARAVENQCYVVAAAQGGLHENGRR
                     TFGHSMIVDPWGDVLDVLPEGEGIVTADIDANRLNSVRNRLPALKYRVLDAV"
BASE COUNT         3707 a         3980 c         4216 g         3715 t
ORIGIN      
        1 aattcaatcc actatatatt taaatttaat taaataatat aaaaatcaaa tagataacaa
       61 actacataag attacttaaa aataatacat tgtttttatg tataaaatat tttataagtt
      121 ttcaggattt tgattattga aaatttttct tgatttcctg acaattttat tgaaacaaat
      181 aattcaaaat taatctagtt taatcataga attaaaataa aatattaaaa ttatgtaatg
      241 agtctcctta aaaatgtttg acattttcag tcttgtgttt tagattatcg aaaaataaaa
      301 ctacataaca ctacaaagga acattactat gaaaccaatt cagatgtttt ccccttttct
      361 gaataatccc cttgttttct tcttgtctgc ggttttgccg cataattccg aacggtctgc
      421 tgtttttctt tgattcgttt taaatatcaa taagataatt gttcccatat atttttaatg
      481 attggattgg gatgcccgac gcgtcggatg gctgtgtttt gccgtccgaa tgtgatggaa
      541 gcctgtccat actgaaaaaa agtctataaa ggagaaatat gatgagtcaa cactctgccg
      601 gagcacgttt ccgccaagcc gtgaaagaat cgaatccgct tgccgtcgcc ggttgcgtca
      661 atgcttattt tgcacgattg gccacccaaa gcggtttcaa agccatctat ctgtccggcg
      721 gcggcgtggc agcctgttct tgcggtatcc ctgatttggg cattaccaca atggaagatg
      781 tgctgattga cgcgcgacgc attacggaca acgtggatac gcctctgctg gtggacatcg
      841 atgtgggttg gggcggtgca ttcaatattg cccgtaccat ccgcaacttt gaacgtgccg
      901 gtgttgcagc ggttcacatc gaagatcagg tagcgcaaaa acgctgcggc caccgtccga
      961 acaaagccat tgtatctaaa gatgaaatgg tcgaccgtat caaagctgcc gtagatgcgc
     1021 gcgttgatga gaacttcgtg attatggcgc gtaccgatgc gctggcggta gaaggtttgg
     1081 atgccgctat cgaacgcgcc caagcttgtg tcgaagccgg tgcggacatg attttccctg
     1141 aagccatgac cgatttgaac atgtaccgcc aatttgcaga tgcggtgaaa gtgcccgtgt
     1201 tggcgaacat taccgagttt ggttccactc cgctttatac ccaaagcgag ctggctgaaa
     1261 acggcgtgtc gctggtgctg tatccgctgt catcgttccg tgcagcaagc aaagccgctc
     1321 tgaatgttta cgaagcgatt atgcgcgatg gcactcaggc ggcggtggtg gacagtatgc
     1381 aaacccgtgc cgagctgtac gagcatctga actatcatgc cttcgagcaa aaactggata
     1441 aattgtttca aaaatgattt accgctttca gacggtcttt caacaaatcc gcatcggtcg
     1501 tctgaaaacc cgaaacccat aaaaacacga aggagaaata ccatgactga aactactcaa
     1561 accccgacct tcaaacctaa aaaatccgtt gcgctttcag gcgttgcggc cggtaatacc
     1621 gctttgtgta ccgttggccg taccggcaac gatttgagct atcgcggtta cgacatcttg
     1681 gatttggcac aaaaatgcga gtttgaagaa gtcgcccacc tgctgattca cggtcatctg
     1741 cccaacaaat tcgagctggc cgcttataaa accaagctca aatccatgcg cggcctgcct
     1801 atccgtgtga ttaaagtttt ggaaagcctg cctgcacata cccatccgat ggacgtaatg
     1861 cgtaccggcg tatccatgct gggctgcgtt catcctgaac gtgaaagcca tccggaaagt
     1921 gaagcgcgcg acatcgccga caaactgatc gccagcctcg gcagcatcct cttgtactgg
     1981 tatcaatatt cgcacaacgg caaacgcatt gaggttgaaa gcgacgaaga gaccatcggc
     2041 ggtcatttcc tgcaactgtt gcacggcaaa cgcccaagcg aatcccacat caaagccatg
     2101 cacgtttcac tgattctgta tgccgaacac gagttcaacg cttctacctt caccgcccgc
     2161 gtgattgccg gtacaggctc tgatatgtac tccagcatta ccggagcaat cggcgcgttg
     2221 aaaggtccga aacacggcgg cgcgaacgaa gtggcttacg atattcaaaa acgctaccgc
     2281 aatgccgacg aagctgaagc cgacatccgc gaacgcatcg gccgcaaaga aatcgtgatc
     2341 ggtttcggtc atccggtgta caccatctcc gaccctcgca acgttgtcat taaagaagtg
     2401 gcacgcggtt tgagcaaaga aaccggcgat atgcgcctct ttgacattgc cgaacgtttg
     2461 gaaagcgtga tgtgggaaga gaaaaaaatg ttcccgaatc tggactggtt ctctgccgtt
     2521 tcctaccaaa aattgggcgt accgaccgct atgttcacac cgctgttcgt aatttcccgt
     2581 acaaccggtt ggagcgcaca cgttcttgag caacgcaaag acggcaaaat catccgtccg
     2641 agcgcaaact acacgggccc tgaagatttg gcgtttgtgg agattgaaga acgctgatga
     2701 ttttcagacg accttgtttg tacaaggtcg tctgaaaaaa gaaatttaat gaatttattg
     2761 gcacactaat tattaatgcg gaacatttga tggataagga caaggggtct tatgcgggta
     2821 ttcctgtaca aaataccaaa gagttagttt ggcagaaaat acaagacata cctatttctg
     2881 aatgtgggga accgttggtc agtgttggta ataccggacg cattcgtgtc aatcctgttt
     2941 atttttctca gggtattgaa ggggcgataa atagtgtttt attgcgtaga agtgttgctg
     3001 ataggctgac tcaggttgtc tctttgctgc cggaagtgta cgggttggaa atttttgatg
     3061 gttggcgtcc tgtcatagtg caaagagcat tacgagaaaa tatgaagcaa gaaattgaaa
     3121 aacgccatcc ggaatatgat gaagttcaag ttagagaagc actggactgt tttgctgctg
     3181 atccagatcg ggcaggaatg cctctgcccc atttgacagg cggatctgtt gatgtcggat
     3241 tgtttgatat aaaaagtggc aaaagtttgg atatgggaag tgagtttgat gcaactggac
     3301 atttatctta tagcgatgct ttagagaaag aaggtgagta tttctcctct gctcgtaatt
     3361 tacgccggat tttgattcat gcgatgaaag aggcaggatt tagtaatttg ccaaccgaat
     3421 ggtggcattt cgattatggc aaccaaaatt gggcttattt tacccaacaa agcaacgcag
     3481 tttttggggc ggtagaagag caggatactt aaattaaaat aaaaattggg aggaaaaatg
     3541 caaactttaa tttcagcaga taatcatttg ctgctgtggg cttttgttat gttagctgcc
     3601 gctgctgcga tttttattga gcaaaacagt cgcttggctg ggaaagtccc tggtgcagta
     3661 ttagctttat tgattgcgtt gattgcttct aatttgggtg ttattccgac ggatgctcca
     3721 gtatttgatg ctgtatggtc ttatattgta cctcttgcta ttccgttgtt attgtttcaa
     3781 ttagatcttc atgctctatt taaggaaagt ggacgtatgc tgtttatttt cctgattagt
     3841 tcactaggga cggtcattgg aacgcttgtc tcatttgcac tattgaaaaa ctatattcct
     3901 gaactagata aggtagctgg catgatttca gcatcttata cgggaggtgg tgttaatttt
     3961 gcagctatgt cagctaagct taaccctgct aaagatgtta ttgcagcaac aattgttgct
     4021 gataatttga tgatggcttg ttactttttt attttgattg gtatctcttc ctcatattgg
     4081 gtcagaaaag tttggggaag tccatatcag gataaattgg agcaggaata tcatgatccg
     4141 agtgtgaata aggctgccga gtattggaaa cctaaatcca tttcgctaca gagtatagcc
     4201 ttatctttgg ctgcctcgat tttgttggtc gcagtttcat tctcattatc cagttttttg
     4261 caaaatcatt ttcaaagtgt tgatggtgtt gcattaaaaa tgctgacagg tttaattagt
     4321 gacaaatatt tgctgttaac gacatttaca ttggcagttg ttttattttt ccgtaaaggc
     4381 attcaaaaac tagatggcag tcaagaatta gggacatatt gtatttatct gttttttgtt
     4441 gtgattggtg ttcctgcctc tataccgtta attattaaaa cagcaccatt actctttgtt
     4501 tttactttga ttattgcggt attgaatttg ttactgacgt tagtgttagg caagctgttc
     4561 aaattcagta ttgaagaaat tgtattggct tgtaatgcca atattggagg gccgactact
     4621 gcagcagcct tagccatcag taaaggttgg cgtgatttag tcggtgcaat tttgttaatt
     4681 ggtactgtag gctacattat cggtaactat ataggttcgt ttgtatatgc cctattgagc
     4741 tgaagactaa tctaacaatc catgaacatt ttcagacgac ccccttccaa aaacgtcggc
     4801 tgaaacctca aaccacaaga aaaacagatc cccaggagaa ccgacatggc tgccaaccaa
     4861 cgttaccgca aaccgctgcc cggtacggat ttggaatact acgacgcgcg tgcggcgtgt
     4921 gaggacatca agcccggctc ttacgacaag ctgccttata caagccgtat cttggctgag
     4981 aacttggtca accgcgcgga caaagtcgat ttgccgacgc tgcaaagctg gctgggccag
     5041 ttgatagaag ggaagcagga aatcgacttt ccgtggtatc ccgcgcgggt ggtgtgccac
     5101 gatattctgg ggcagaccgc gttggtggat ttggcaggcc tgcgcgatgc gattgccgaa
     5161 aaaggcggcg atcctgccaa agtgaatccg gtggtgcaaa cccagctcat cgtcgaccac
     5221 tcgctggcgg tggagtgcgg cggttacgat cctgatgctt tccgcaaaaa ccgcgaaatc
     5281 gaagacagac gtaacgaaga ccgtttccac ttcatcaact ggacaaaaac cgcatttgaa
     5341 aatgtggacg tgattccggc gggcaacggc atcatgcacc aaatcaatct agaaaaaatg
     5401 tcgcccgtcg tccaagtcaa aaacggcgtg gcgttccccg atacctgcgt cggcacggat
     5461 tcgcacacgc cgcacgtcga tgcgctgggc gtgatttccg tgggcgtggg cggattggaa
     5521 gcggaaaccg taatgctggg acgcgcgtcc atgatgcgcc tgcccgatat tgtcggcgtt
     5581 gagctgaacg gcaaacggca ggcgggcatt acggcgacgg atattgtgtt ggcgctgacc
     5641 gagtttctgc gcaaagagcg cgtggtcggg gcgtttgtcg aatttttcgg cgagggcgcg
     5701 agaagcctgt ctatcggcga ccgcgcgacc atttccaaca tgacgccgga gttcggcgcg
     5761 actgccgcga tgttcgctat tgatgagcaa accattgatt atttgaaact gaccggacgc
     5821 gacgacgcgc aggtgaaatt ggtggaaacc tacgccaaaa ccgcaggctt atgggcagat
     5881 gccttgaaaa ccgccgttta tcctcgcgtt ttgaaatttg atttgagcag cgtaacgcgc
     5941 aatatggcag gtccaagcaa cccgcacgcg cgttttgcga ccgccgattt ggccagcaaa
     6001 ggcttggcta aaccttacga agagccttca gacggacaaa tgcccgacgg cgcggtcatc
     6061 atcgccgcga ttaccagttg caccaacact tccaacccgc gcaacgtcgt tgccgccgcg
     6121 ctcttggcgc gcaacgccaa ccgcttcggg ctgaaacgca aaccgtgggt caaaacctcg
     6181 tttgcccccg gttcgaaagt ggcggaaatt tatttgaaag aagcaggcct gctgcccgaa
     6241 atggaaaaac tcggcttcgg tatcgtcgcc ttcgcctgca ccacctgcaa cggcatgagt
     6301 ggcgcgctgg atccgaaaat ccagaaagaa atcatcgacc gcgatttgta cgccaccgcc
     6361 gtattatcag gcaaccgcaa cttcgacggc cgtgtccatc cgtatgcgaa acaggctttc
     6421 ctcgcttcgc ctccgttggt cgttgcctac gcgctggcag gcagtatccg tttcgatatt
     6481 gaaaacgacg tactcggcgt tgcagacggc aaggaaatcc gcctgaaaga catttggcct
     6541 gccgatgaag aaatcgatgc cgtcgttgcc gaatatgtga aaccgcagca gttccgcgat
     6601 gtgtatgtac cgatgttcga caccggcaca gcgcaaaaag cacctagtcc gctgtacgat
     6661 tggcgtccaa tgtccaccta tatccgccgc ccaccttact gggaaggcgc attggcaggg
     6721 gagcgcacat tgagcggtat gcgtccgctg gcgattttgc ccgacaacat caccaccgac
     6781 cacctctcgc catccaatgc gattttggca agcagtgccg caggcgaata tttggcgaaa
     6841 atgggtttgc ctgaagaaga cttcaactct tacgcaaccc accgcggcga ccacttgacc
     6901 gcccaacgcg caacctttgc caatccgaaa ctgtttaacg aaatggtgag aaacgaagat
     6961 ggcagtgtac gccaaggttc gctggcacgc gttgaacccg aaggccaaac catgcgcatg
     7021 tgggaagcca tcgaaaccta tatgaaccgc aaacagccgc tcatcatcat tgccggtgcg
     7081 gactacggtc aaggctcaag ccgcgactgg gctgcaaaag gcgtacgcct cgccggtgtg
     7141 gaagcgattg ttgccgaagg cttcgagcgt atccaccgta ccaacttgat cggtatgggc
     7201 gtattgccgc tgcagttcaa accgggtacc aaccgccaca ccttgcaact ggacggtacg
     7261 gaaacctacg acgtggtcgg tgaacgcaaa ccgcgctgcg atctgaccct cgtgattcac
     7321 cgtaaaaacg gcgaaaccgt cgaagttccc gttacctgcc gcctcgatac tgcagaagaa
     7381 gtattggtat atgaagccgg cggcgtgttg caacggtttg cacaggattt tttggaaggg
     7441 aacgcggctt agaggtcgtc tgaaaagcaa gacgtagcgt gggtcgggtt caacattttg
     7501 ctcattcacg taattctcga tatggcaggc atctactgta aatcgtcatt cccgcgcagg
     7561 cgggaatcca gaaagtggaa ttgaggaaac cttatttatc cgatgagttt ctgtgcggac
     7621 aaatttggat tcccgcctgc gcgggaatga cggggtttaa taatctgccg tatcacaaca
     7681 cagtagccgt agattgtggc gaaccccgac agtttgcgga atcaaacggc tttggtcgga
     7741 gtggcagcct aatccactat aaaaatcgtg ggcagagccc acgctacata aggagaatct
     7801 agaaatgccg caaattaaaa tccccgccgt ttactaccgc ggtggcacat caaaaggcgt
     7861 gtttttcaaa cgttccgacc tgcccgaggc ggcgcgggaa gcgggcagcg cacgcgacaa
     7921 aatcctcttg cgcgtactcg gcagcccgga cccctacggc aagcagatag acggtttggg
     7981 caacgccagt tcgtccacca gcaaagccgt gattttggac aagtccgaac gcgccgatca
     8041 cgatgtcgat taccttttcg ggcaagtttc catcgacaaa ccttttgtcg attggagtgg
     8101 caactgcggc aacctcaccg ccgccgtagg cgcatttgcc atcgaacaag gtttggtcga
     8161 taaatccaaa atcccttcag acggtatctg cacggtgaaa atctggcaga aaaacattgg
     8221 caaaaccatt attgcccatg ttccgatgca acacggcgca gttttggaaa cgggcgattt
     8281 tgagcttgac ggcgtaacgt tcccggcagc cgaagtacaa atcgaatttt tagatccggc
     8341 cgacggcgaa ggcagtatgt tcccaaccgg caatttggtc gatgaaattg atgtgccgaa
     8401 tataggccgt ctgaaagcca cgcttatcaa tgccggtatt ccaaccattt tcctgaatgc
     8461 cgtagatttg ggctacacag gcaaagagtt gcaagacgac atcaacaacg atgccgcggc
     8521 tttggaaaaa ttcgagaaaa tccgcgctta cggtgcgctg aaaatgggtc tgatcagcga
     8581 cgtatccgaa gctgccgccc gcgcgcacac gccgaaagtc gccttcgtcg cgcccgccgc
     8641 cgattacacc gcctccagtg gcaaaaccgt gaacgccgcc gacatcgatt tgctggtacg
     8701 cgccctgagc atgggcaaat tgcaccacgc gatgatgggt accgcctctg ttgccattgc
     8761 gaccgccgcc gccgtgcccg gtacgctggt caaccttgcc gcaggcggcg gaacgcgtaa
     8821 agaagtgcgc ttcgggcatc cttccggcac attgcgcgtc ggtgcagccg ccgaatgtca
     8881 ggacggacaa tggacggcca ccaaagcggt tatgagccgc agcgcacgcg tgatgatgga
     8941 aggttgggtc agggtgccgg aagattgttt ttaaattgac gtagcatggg tttgcccgcg
     9001 agccataaac aggtcgtctg aaaaacaagt aaacatcaaa tcactgacca ttcctttccc
     9061 ttgccctgtg gcggaaggcg gcaaatcaca aggaagaaca cggaaacccc gataaaagac
     9121 agcttcccgt attaccgtca ttcccgcgca ggcgggaatc tagacctgtc aatatggagg
     9181 attggtaggg gaaaacaggt ttcgtgagtt ctacattctg gattcccgcc acagcctgtc
     9241 ctcgcgtagg cggggacgga ataacgatag aaaatgcggc atatgctttg cccaaagagg
     9301 ccgtctgaaa caccttgcgc ctgatgtctg cctttttcag acgaccccac accaaaaaaa
     9361 caaccacaaa ctacaaggag aaacatcatg tccgaccaac tcatcctcgt tctgaactgc
     9421 ggcagttcat cgctcaaagg cgccgttatc gaccgaaaaa gcggcagcgt cgtcctaagc
     9481 tgcctcggcg aacgcctgac cacgcccgaa gccgtcatta cgttcaacaa agacggcaac
     9541 aaacgccaag ttcccctgag cggccgcaac tgccatgccg gcgcggtggg tatgctgctg
     9601 aacgaactgg aaaaacacgg actgcacgac cgcatcaaag ccgtcggcca ccgcatcgcc
     9661 cacggcggcg aaaaatacag cgagtctgtt ttgatcgacc aggccgtaat ggacgaactc
     9721 aatgcctgca ttccgcttgc gccgctgcac aaccccgcca acatcagcgg catccttgcc
     9781 gcacaggaac atttccccgg cctgcccaat gtcggcgtga tggatacttc gttccaccaa
     9841 accatgccgg agcgtgccta cacttatgcc gtgccgcgcg agttgcgtaa aaaatacgct
     9901 ttccgccgct acggtttcca cggcaccagt atgcgttacg ttgcccctga agccgcacgc
     9961 atcttgggca aacctctgga agacatccgc atgattattg cccacttagg caacggcgca
    10021 tccattaccg ccatcaaaaa cggcaaatcc gtcgatacca gtatgggttt cacgccgatc
    10081 gaaggtttgg taatgggtac acgttgcggc gacatcgatc cgggcgtata cagctatctg
    10141 acttcccacg ccgggatgga tgttgcccaa gtggatgaaa tgctgaacaa aaaatcaggt
    10201 ttgctcggta tttccgaact ttccaacgac tgccgcaccc tcgaaatcgc cgccgacgaa
    10261 ggccacgaag gcgcgcgcct cgccctcgaa gtcatgacct accgcctcgc caaatacatc
    10321 gcttcgatgg ctgtggcctg cggcggcgtt gacgcactcg tgttcaccgg cggtatcggc
    10381 gaaaactcgc gtaatatccg tgccaaaacc gtttcctatc ttgatttctt gggtctgcac
    10441 atcgacacta aagccaatat ggacaaacgc tacggcaatt cgggtattat cagcccgacc
    10501 gattcttctc cggctgtttt ggttgtcccg accaatgaag aactgatgat tgcctgcgac
    10561 actgccgaac ttgccggcat cttgtagcca aaaaagggac gagtccgcac aatgccgtct
    10621 gaaattttca gacggcattt tgtttggatt ttgggcgtac aatacggaaa acatgacgat
    10681 aaggacacaa accatggcac agtttttcgc tattcatccc gacaaccccc aagaacgcct
    10741 catcaagcag gcggtcgaaa tcgtcaataa aggcggcgtg gtcgtttatc cgaccgattc
    10801 ctgttatgcc ttgggttgca aactcggcga taaggcggcg atggaacgca tactctccat
    10861 ccgaaaaatc gatttgaaac accacctgac cctgatgtgc gccgatttga gcgagttggg
    10921 cacatacgcc aaaatcgaca acgtacagtt tcgtcagctt aaggccgcca cgcccgggcc
    10981 ttataccttt atcttgcagg cgacgaagga agtgccggcg cgcacgctgc acccgaaacg
    11041 caaaaccatc gggctgcgta ttcccgataa tgccattgca caagccctgc tgggggaatt
    11101 gggcgaaccg cttttaagct gcaccctgat gctgcccgaa gacggcgaac cattgaccga
    11161 tccttatgaa atccgcgagc gtttggaaca cgccgtcgat ttggtgattg acggcggctg
    11221 gtgcggaacc gagccgacca ccgtcatcga catgaccgac ggtacggaat tggtgcgcca
    11281 aggttgcggc gatacggcgg tgttcggttt gtagggaaac cgatgccgtc tgaagcatcg
    11341 gctgttcaga cggcattgcg cgccttgccg gcggcagtcc gaaatgccgg cgcgtatcgc
    11401 gctcggtcgg aatatccgtt tgaaacggca aacaaaatgc cgtccgaacg cgggttcgga
    11461 cggcattttg atgcattact gcaccgcaat cggaattctc ggttcgtaga gcaggtcgta
    11521 ggtcggcttg ttgagcaggt cttggagcgt gaaaccgtcc aaatacgtga aaaacgactt
    11581 catcgcgccg ccgagtatgc ctgtcagacg gcaggacggt gtgatcaggc attcgttgtt
    11641 ctcgcccatg cactcgacca gctgcatcgg ttcgaggtgg cggacgaccg agccgatgtt
    11701 gatgcggtcg ggcggtgcgg caagccgcag accgccgcct tttccgcgca cgctgtggag
    11761 gaagccgcct ttgaccagcg cggtaacgac cttcatcaga tggcttttgg aaatgccgta
    11821 ggttacggcg atggtactga tgttgaccag cgcatcgtcg ttgatggcag tgtagataag
    11881 gacgcgcagc ccgtagtccg tatgttgtgt caaatacatg attttctcgg tatggattgt
    11941 tattcttatc ggtacggttt aaggttcacg gacaatacct taatggttga aaccctgtcc
    12001 gtcggggcgg tagaatgcag cctgtctgcg gcggtatgcc gtctgaaaca tccgcgctac
    12061 cgtttgataa tttgttattg taactcaaaa tcatgaaacc gttgaaacga catcccgccc
    12121 ttatcgggct ttcgcgtgac caccaccatt cgctttccct gtgcgtgcgt ctgttgcgga
    12181 cgccggaaga aaggcatcgg gacgaactcg aaccgcattt tgccgaattg gaaacccatt
    12241 ttcgcgaaga agaagccaag tttgccccaa tttggcagaa tgtcgccccc gaattgaaac
    12301 aacgtttcga gaaagaccac gcccgactgc ggcagatgat ggcaagcccc gaatacggta
    12361 acgcggcgtg gaataccgct tttgccacaa ccctgcgcga ccacgcgcgc tttgaagaac
    12421 gcgagctgtt tcccgccgcc gaaccgtttt tgccggcatg attccgtttt gcggcaaata
    12481 tattaatgat aaacaaggaa cacacatgaa atttaccaag caccccgtct gggcaatggc
    12541 gttccgccca ttttattcgc tggcggctct gtacggcgca ttgtccgtat tgctgtgggg
    12601 tttcggctac acgggaacgc acgagctgtc cggtttctat tggcacgcgc atgagatgat
    12661 ttggggttat gccggactgg tcgtcatcgc cttcctgctg accgccgtcg ccacttggac
    12721 ggggcagccg cccacgcggg gcggcgttct ggtcggcttg actatctttt ggctggctgc
    12781 gcggattgcc gcctttatcc cgggttgggg tgcgtcggca agcggcatac tcggtacgct
    12841 gtttttctgg tacggcgcgg tgtgcatggc tttgcccgtt atccgttcac agaatcaacg
    12901 caactatgtt gccgtgttcg cgctgttcgt cttgggcggc acgcatgcgg cgttccacgt
    12961 ccagctgcac aacggcaacc taggcggact cttgagcgga ttgcagtcgg gcttggtgat
    13021 ggtgtcgggt tttatcggtc tgattggtac gcggattatt tcgtttttta cgtccaaacg
    13081 gttgaatgtg ccgcagattc ccagtccgaa atgggtggcg caggcttcgc tgtggctgcc
    13141 catgctgacc gccatgctga tggcgcacgg cgtgatgcct tggctgtcgg cggctttcgc
    13201 gtttgcggca ggtgtgattt ttaccgtgca ggtgtaccgc tggtggtata aacccgtgtt
    13261 gaaagagccg atgctgtgga ttctgtttgc cggctatctg tttaccggat tggggctgat
    13321 tgcggtcggc gcgtcttatt tcaaacccgc tttcctcaat ctgggtgtgc atctgatcgg
    13381 ggtcggcggt atcggcgtgc tgactttggg catgatggcg cgtaccgcgc tcggtcatac
    13441 gggcaatccg atttatccgc cgcccaaagc cgttcccgtt gcgttttggc tgatgatggc
    13501 ggcaaccgcc gtccgtatgg ttgccgtatt ttcttccggc actgcctaca cgcacagcat
    13561 acgcacctct tcggttttgt ttgcactcgc gcttttggtg tatgcgtgga agtatattcc
    13621 ttggctgatt cgtccgcgtt cggacggcag gcccggttga gacaaaccgc cgcagatttc
    13681 gggtctgggc ggtttgcttt tcagacggca gggcggtcag ttgccgtcca gccagcggtc
    13741 gcgtgtggtt ttggcttctt caaaatagcg gtacagggct tcgcggtcgt cggtggtcag
    13801 gatgtttgcc aaaacgtcca actgtttgcc caagccttga accagttgca gcaggctgtc
    13861 tttgttggca aggcagatgt ccgcccacac ggcgggatga ccggaggcga tgcgggtgaa
    13921 gtcccgaaag cccgtggcgg cgaatttcag atattcctgt ccgtcggggt ggtcgagaat
    13981 ctggtggaca taggcgaagg cggtcaggtg gggcatatgg gagacggcgg cgaaaaccgc
    14041 gtcgtggcgt tgcgcgtcca tcgtataaat ttccgcaccg accgcgtgcc acagttcttc
    14101 taccaaggca atgccgtctg aatgttcgcc gccgtgtggc gtgatgatga gttttctgtg
    14161 gcggaacagc ccgaactgcg cggcttgcgc accgcttctg tccgaaccgg caatcgggtg
    14221 ggcggcgatg cagtggtgca gacggtcggg cagacagcgg cggaaggctt cgatgaccga
    14281 agatttggtg ctgccgacat cggaaatcca agtgtgttcc ggcaaaacgg ggcgcagcgc
    14341 ggtcaaaatg gcgggaacgg tggcgacggg cgtggcaatc agtaccaagt ccgcaccgcc
    14401 gatgctgtcc gcgtcgatgg caacggacgc acggtcaatc acgccgcgtt ccaatgcacg
    14461 ttcgaggttg tcgcggtcgg tgtcgatacc ggtaacggtg cggacgagtc cctgcctttt
    14521 gaggtcgaga acgaacgaac cgccgatcag ccctacaccg atgagggcaa tatggttcaa
    14581 aatgggcatt tgtgtaaacg gttttcgcaa agtaccgtca tggtagccta tcggcggaat
    14641 atgccgcaag ttcggcagga aaaaggagaa gaaatggaca aaatcagagt tgccgccgtg
    14701 cagatggtgt cgggcgtgtc gccggaaacc aacgtcgctg ccatgaaacg cctggtcgca
    14761 cgggcggcgg agcagggtgt ggattgggtg ctgctgcccg aatattgggt gctgatgggc
    14821 gcaaacgata ccgacaaact cgcgcttgcc gagcctttgg gcggcggacg ctttcagacg
    14881 gcattgagcg aaacggcgaa agaatgcggc gtggtgctgt tcggcggaac cgtgccgctg
    14941 caaagccccg aggcgggcaa ggtcatgaat actttattgg tgtacgggcg cgacggcaaa
    15001 cggacggggc tgtaccacaa aatgcacctc ttcggctttt ccggtttggg cgaacgctat
    15061 gccgaagccg ataccatcag cgcagggcgg gaagtgccgc acttgtcggc agaaggcgtg
    15121 tcggtggcgg cgggcatttg ttacgatgtc cgctttcccg aatttttccg ccgccagctg
    15181 ccgtttgacg tattgatgct gcccgctgcg tttacgcaca cgacgggcaa ggcgcattgg
    15241 gagctgctgc tgcgcgcgcg tgccgtcgaa aaccaatgtt acgtcgtggc ggcggcacag
    15301 ggcggtttgc acgaaaacgg acggcgcacg ttcggacaca gcatgattgt cgatccgtgg
    15361 ggcgacgtat tggacgtatt acccgaaggc gaaggcatcg ttacggcaga catcgatgcc
    15421 aaccgcctga acagcgtccg caaccgcctg cccgccttga aataccgggt tttggatgcc
    15481 gtctgaaggt tcagacggca tcggtgccgg ggaatcagcg ggctgtagga tgggcttcag
    15541 cctgccattt ccatcaatcc cacatttcta ccgttttcat cgaatccatc gaatccgccc
    15601 ctttcgacga cccagtcc
//
LOCUS       DAWGKF010000036        15528 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.036, whole genome shotgun sequence.
ACCESSION   DAWGKF010000036 DAWGKF010000000
VERSION     DAWGKF010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15528)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15528)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15528
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.036"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            6..81
                     /locus_tag="WHR07_000787"
     tRNA            6..81
                     /locus_tag="WHR07_000787"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:39..41,aa:Trp,seq:cca)
     gene            196..474
                     /gene="secE"
                     /locus_tag="WHR07_000788"
     CDS             196..474
                     /gene="secE"
                     /locus_tag="WHR07_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HEZ2130028.1"
                     /translation="MTEHTPEKKNVKVDQLVVQDKESASNSGKEGFFAYFSNSWSEFK
                     KVVWPKREDAVRMTVFVIVFVAVLSIFIYAADTAISWLFFDVLLRREG"
     gene            476..1012
                     /gene="nusG"
                     /locus_tag="WHR07_000789"
     CDS             476..1012
                     /gene="nusG"
                     /locus_tag="WHR07_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HEZ2130029.1"
                     /translation="MSKKWYVVQAYSGFEKNVQRILEERIAREEMGDYFGQILVPVEK
                     VVDIRNGRKTISERKSYPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRANRPTPISQR
                     EAEIILQQVQTGIEKPKPKVEFEVGQQVRVNEGPFADFNGVVEEVNYERNKLRVSVQI
                     FGRETPVELEFSQVEKIN"
     gene            1113..1547
                     /gene="rplK"
                     /locus_tag="WHR07_000790"
     CDS             1113..1547
                     /gene="rplK"
                     /locus_tag="WHR07_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEZ2130030.1"
                     /translation="MAKKIIGYIKLQIPAGKANPSPPVGPALGQRGLNIMEFCKAFNA
                     ATQGMEPGLPIPVVITAFADKSFTFVMKTPPASILLKKAAGLQKGSSNPLTNKVGKLT
                     RAQLEEIAKTKEPDLTAADLDAAVRTIAGSARSMGLDVEGVV"
     gene            1547..2242
                     /gene="rplA"
                     /locus_tag="WHR07_000791"
     CDS             1547..2242
                     /gene="rplA"
                     /locus_tag="WHR07_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEZ2130031.1"
                     /translation="MAKVSKRLKALRSSVEANKLYAIDEAIALVKKAATAKFDESVDV
                     SFNLGVDPRKSDQVIRGSVVLPKGTGKITRVAVFTQGANAEAAKEAGADIVGFEDLAA
                     EIKAGNLNFDVVIASPDAMRIVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ
                     VQYRTDKAGIVHATIGRASFAEADLKENFDALLDAIVKAKPAAAKGQYLKKVAVSSTM
                     GLGIRVDTSSVNN"
     gene            2472..2972
                     /gene="rplJ"
                     /locus_tag="WHR07_000792"
     CDS             2472..2972
                     /gene="rplJ"
                     /locus_tag="WHR07_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEZ2130032.1"
                     /translation="MSLNIETKKVAVEEISAAIANAQTLVVAEYRGISVSSMTELRAN
                     ARKEGVYLRVLKNTLARRAVQGTSFAELADQMVGPLVYAASEDAVAAAKVLHQFAKKD
                     DKIVVKAGSYNGEVMNAAQVAELASIPSREELLSKLLFVMQAPVSGFARGLAALAEKK
                     AGEEAA"
     gene            3030..3401
                     /gene="rplL"
                     /locus_tag="WHR07_000793"
     CDS             3030..3401
                     /gene="rplL"
                     /locus_tag="WHR07_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HEZ2130033.1"
                     /translation="MAITKEDILEAVGSLTVMELNDLVKAFEEKFGVSAAAVAVAGPA
                     GAGAVDAEEKTEFDVVLASAGDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTIKEGVS
                     KAEAEDIQKQLEEAGAKVEIK"
     gene            3592..7770
                     /gene="rpoB"
                     /locus_tag="WHR07_000794"
     CDS             3592..7770
                     /gene="rpoB"
                     /locus_tag="WHR07_000794"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEZ2130034.1"
                     /translation="MSYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENA
                     FDKRTDDGLQAAFNSIFPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRA
                     RIRLVILDKEASKPTVKEVRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVF
                     FEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALG
                     YNNEQILDIFYDKETFYLSSNGVQTDLVAGRLKGETAKVDILDKEGNVLVAKGKRITA
                     KNIRDITNAGLTRLDVEPESLLGKALAADLIDSETGEVLASANDEITEELLAKFDING
                     VKEITTLYINELDQGAYISNTLRTDETAGRQAARVAIYRMMRPGEPPTEEAVEQLFNR
                     LFFSEDSYDLSRVGRMKFNTRTYEQKLSEAQQNSWYGRLLNETFAGAAEKGGYVLSVE
                     DIVASIATLVELRNGHGEVDDIDHLGNRRVRSVGELTENQFRSGLARVERAVKERLNQ
                     AESENLMPHDLINAKPVSAAIKEFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLT
                     RERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRRVIDG
                     KVTEEIDYLSAIEEGRYVIAQANADLDSDGNLIGDLVTCREKGETIMATPDRVQYMDV
                     ATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPMVGTGIERSVAVDSA
                     TAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNLVKFTRSNQSTNINQRPAV
                     KAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNYEDSILISEKVAADDRYT
                     SIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYIGAEVEAGDVLVGKV
                     TPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQVFTREGIQRDKRA
                     QSIIDSELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKLAKGSEITTEYLA
                     GLPSRHDWFDIRLTDEDLAKQLELIKVSLQQKREEADELYEIKKKKLTQGDELQPGVQ
                     KMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLNPLGVPS
                     RMNIGQILEVHLGWAAKGIGERIDRMLKEQRKAGELREFLNRLYNGSGKKEDLDSLTD
                     EEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSEDPEVEKLGFNDSKTQITL
                     YDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF
                     GEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVK
                     EIRSLGLDIDLERY"
     gene            7927..12102
                     /gene="rpoC"
                     /locus_tag="WHR07_000795"
     CDS             7927..12102
                     /gene="rpoC"
                     /locus_tag="WHR07_000795"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEZ2130035.1"
                     /translation="MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPE
                     TINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRE
                     RMGHIELAAPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQ
                     LLTEDDYYNKLDEYGDDFDAKMGAEGIRELLRTLNVAGEIEILRQELESTGSDTKIKK
                     IAKRLKVLEAFHRSGMKLEWMIMDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVIN
                     RNNRLKRLLELHAPDIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIK
                     GKGGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIFHKLEKQGL
                     ASTVKAAKKLVEQEVPEVWDILEEVIREHPIMLNRAPTLHRLGIQAFEPILIEGKAIQ
                     LHPLVCAAFNADFDGDQMAVHVPLSLEAQMEARTLMLASNNVLSPANGEPIIVPSQDI
                     VLGLYYMTRDRINAKGEGSLFADVKEVHRAYHTKQVELGTKITVRLREWVKNEAGEFE
                     PVVNRYETTVGRALLSEILPKGLPFEYVNKALKKKEISKLINASFRLCGLRDTVIFAD
                     HLMYTGFGFAAKGGISIAVDDMEIPKEKVALLAEANAEVKEIEDQYRQGLVTNGERYN
                     KVVDIWGRAGDKIAKAMMDNLSKQKVIDRDGNEVDQESFNSIYMMADSGARGSAAQIK
                     QLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHGARKGLADTALKTANSGYL
                     TRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRERILGRVTASDVVDPSSG
                     ETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHCYGRDLARGKLVNAG
                     EAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTARFSSQMRYVANN
                     KGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTLATWDPHTRPM
                     ITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRPTVKLLDEN
                     GVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGGLPRVA
                     ELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIITDVDGVAYETLISKEKQILVHDG
                     QVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIRQ
                     MLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENVLLGITKASLSTD
                     SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQE
                     VEQETAETQVTDE"
     gene            12360..12731
                     /gene="rpsL"
                     /locus_tag="WHR07_000796"
     CDS             12360..12731
                     /gene="rpsL"
                     /locus_tag="WHR07_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005306278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEZ2130036.1"
                     /translation="MPTINQLVRKGRQKPVYVNKVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSL
                     DTAGVKDRKQARSKYGAKRPK"
     gene            12849..13319
                     /gene="rpsG"
                     /locus_tag="WHR07_000797"
     CDS             12849..13319
                     /gene="rpsG"
                     /locus_tag="WHR07_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEZ2130037.1"
                     /translation="MPRRREVPKRDVLPDPKFGSVELTKFMNVLMIDGKKSVAERIVY
                     GALEQIEKKTGKVAIEVFNEAIANAKPIVEVKSRRVGGANYQVPVEVRPSRRLALAMR
                     WVRDAARKRGEKSMDLRLAGELIDASEGRGGALKKREEVHRMAEANKAFSHFRF"
     gene            13338..15443
                     /gene="fusA"
                     /locus_tag="WHR07_000798"
     CDS             13338..15443
                     /gene="fusA"
                     /locus_tag="WHR07_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEZ2130038.1"
                     /translation="MARKTPISLYRNIGISAHIDAGKTTTTERILFYTGLTHKLGEVH
                     DGAATTDYMEQEQERGITITSAAVTSYWSGMAKQFPEHRFNIIDTPGHVDFTVEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYQVPRLAFVNKMDRQGANFFRVVEQMKT
                     RLRANPVPIVIPVGAEDNFSGVVDLLKMKSIIWNEADKGTTFTYGDIPAELVETAEEW
                     RQNMIEAAAEASEELMDKYLGGDELTEEEIVGALRQRTLAGEIQPMLCGSAFKNKGVQ
                     RMLDAVVELLPAPTDIPPVQGVNPNTEEADSRQASDEEKFSALAFKMLNDKYVGQLTF
                     IRVYSGVVKSGDTVLNSVKGTRERIGRLVQMTAADRTEIEEVRAGDIAAAIGLKDVTT
                     GETLCAESAPIILERMEFPEPVIHIAVEPKTKADQEKMGIALNRLAKEDPSFRVRTDE
                     ESGQTIISGMGELHLEIIVDRMKREFGVEANIGAPQVAYRETIRKAVKAEYKHAKQSG
                     GKGQYGHVVIEMEPMEPGGEGYEFIDEIKGGVIPREFIPSVDKGIRDTLPNGIVAGYP
                     VVDVRIRLVFGSYHDVDSSQLAFELAASQAFKEGMRQASPALLEPIMAVEVETPEEYM
                     GDVMGDLNRRRGVVLGMDDDGIGGKKVRAEVPLAEMFGYSTDLRSATQGRATYSMEFK
                     KYSEAPAHIAAAVTEARKG"
BASE COUNT         4146 a         3445 c         4010 g         3927 t
ORIGIN      
        1 tttagaggcc aatagctcaa ttggtagagt atcggtctcc aaaaccgagg gttgggggtt
       61 cgagaccctc ttggcctgcc aaataaaaaa ttaaccggcc ttgtgccggt taattttttt
      121 gtatttgtta tttagtaaac tctcttgcca tttacatgga ttgagaatag acagatgcta
      181 tgatggataa ataatatgac agaacatacg cctgaaaaaa agaacgttaa agtggatcaa
      241 ctggttgttc aagataaaga atctgcatct aattccggta aggaagggtt ttttgcatat
      301 ttctcaaatt cttggtccga attcaaaaag gtggtttggc ctaagcgtga agatgctgtc
      361 agaatgactg tatttgttat agtgtttgtt gctgtgcttt ctatatttat ctatgcggca
      421 gatacagcaa tttcgtggtt attttttgat gtattgctga gaagggaagg ttgagatgtc
      481 gaaaaaatgg tatgttgtac aggcgtattc ggggtttgag aagaatgtcc aacgaatatt
      541 ggaagagcgt attgcccgtg aggagatggg agattatttc ggacaaattc tggtgcctgt
      601 agagaaagtt gttgatatcc gcaatggtcg taagactatt agtgaaagaa agtcatatcc
      661 tggttatgtg ctagttgaga tggaaatgac agatgactct tggcatcttg taaaaagcac
      721 cccccgtgtt tccggtttta ttggagggag ggctaataga cctacgccga ttagtcagag
      781 agaggctgaa attattttac agcaggttca gaccggcata gagaagccga aaccaaaagt
      841 tgaatttgag gtcggtcaac aggttcgtgt aaatgaaggg ccgtttgcgg attttaacgg
      901 ggtggttgag gaggtcaatt atgaacggaa taagttacgc gtgtctgttc agatatttgg
      961 tagagaaaca cccgttgagc tggagttcag ccaggttgaa aagattaact gatttttata
     1021 cttgaaaaaa aagcaataag aggatagaat caaaaattaa cttggggagc ggaaatggtt
     1081 ccgcgtctta cccgttttta ggagtccgtt aagtggcaaa gaaaattatc ggctatatta
     1141 aactgcaaat tcctgcaggt aaagccaatc catctcctcc ggttggtcct gctttgggtc
     1201 agcgcggttt gaatattatg gaattttgta aggcatttaa tgctgcaacc caaggtatgg
     1261 agcctggctt accgattccg gttgtgatta ctgcatttgc agataaatca ttcacatttg
     1321 tgatgaaaac cccgccagct tctatcttgt tgaaaaaggc tgccggtttg caaaaaggta
     1381 gttctaatcc tctgaccaac aaagtgggta aattgacccg tgcccagttg gaagaaattg
     1441 ctaaaactaa agagcctgat ttgactgctg ctgacttgga tgcggctgtc cgtactatag
     1501 caggttctgc tcgctcaatg ggcttggatg tggagggtgt tgtataatgg ctaaagtatc
     1561 taaacgcttg aaagctcttc gctcttctgt ggaagccaat aaattatatg caattgatga
     1621 agcaattgct ttggtaaaaa aagcagcgac tgctaaattt gacgagtctg ttgacgtatc
     1681 tttcaacttg ggcgttgatc cgcgtaaatc tgaccaagtt atccgtggtt cggtcgttct
     1741 gcctaaaggc accggtaaga taacccgtgt ggctgtattt actcaaggtg caaatgcaga
     1801 agctgctaaa gaagctggtg cagatatcgt cggtttcgaa gatttggctg ctgaaatcaa
     1861 agcaggcaat ctgaactttg acgttgttat tgcttctccc gatgcaatgc gtattgttgg
     1921 tcaattgggt actattttgg gtcctcgagg cttgatgcca aaccctaaag taggtactgt
     1981 tactcctaac gttgctgaag cagtaaaaaa tgcaaaagca ggtcaagtgc agtaccgtac
     2041 cgacaaggca ggtattgttc atgcaacgat tggtcgtgct tcattcgctg aagctgattt
     2101 gaaagagaac tttgatgcgt tgctggatgc tatcgttaaa gccaagcctg ctgccgctaa
     2161 aggtcagtat ctgaaaaaag ttgctgtgtc tagcaccatg ggtttgggta ttcgcgttga
     2221 tacatcaagc gtaaataact aatcttaagg aattttcaag cagtttggtt ttctgggctg
     2281 cttgaatttg ggctacttaa aattaagtag atgtccaaga ccgtagggat cgtaagattt
     2341 aatcgtaact gccctacgca gacggtagtc ctgaaacaca ttgcaagatt gcttgtaaga
     2401 tgtcttttta ggttaccgcg ctggtgggat atcgttttgg tatcctgttt ataaacagtg
     2461 ggaggtagac cttgagtctc aatattgaaa ccaagaaagt ggcggtcgag gaaattagcg
     2521 cggcaattgc taatgctcaa accctcgtag tcgctgaata tcgcggtatc agtgtttcca
     2581 gtatgactga gcttcgtgcg aatgcacgta aagaaggcgt ttatttgcgc gttctgaaaa
     2641 atactttggc tcgtcgtgca gtgcaaggta cttcatttgc agaattggcc gatcaaatgg
     2701 ttggtccgtt ggtttacgct gcttctgaag atgctgttgc tgctgctaaa gtgttgcacc
     2761 aattcgcgaa aaaagatgac aaaattgtcg ttaaagccgg ttcttacaat ggcgaagtaa
     2821 tgaatgctgc tcaggttgct gagttggctt ctattccgag ccgcgaagag ctgttgtcca
     2881 aactgttgtt cgttatgcaa gctcctgtat cgggctttgc gcgcggtttg gctgctttgg
     2941 cagagaaaaa agccggcgaa gaagccgctt aatcgatttt gtttctgtta atcaattatt
     3001 ttttaataca atatttggag taaaatagca tggctattac taaagaagac attttggaag
     3061 cagttggttc tttgaccgta atggaattga acgacttggt taaagctttt gaagaaaaat
     3121 tcggtgtttc tgctgctgct gttgcagttg caggtcctgc tggtgccggt gctgtcgatg
     3181 ctgaagaaaa aaccgaattt gatgtcgttt tggcttctgc cggcgatcaa aaagtcggcg
     3241 tgattaaagt tgtccgtgca attaccggtt tgggtctgaa agaagctaaa gacatcgttg
     3301 acggtgcacc taaaaccatt aaagagggtg tttctaaagc tgaagccgaa gacatccaaa
     3361 aacaactgga agaagccggc gctaaagtcg aaatcaaata atttgatgct tcttatgaag
     3421 gctggcagtt ttctgccagc cttattttgc ttcttaaaat aaacatcaag tattgtttac
     3481 atttatttgc atagttttta tcaaatcatt gcaaataaat gtaaacatca gattgatgcg
     3541 tgccgttgct ttcaaacggc ctattattga aaattacttt tcggagtgta tatgagctat
     3601 tcgtttaccg agaaaaaacg tatccgtaag agttttgcaa agcgggaaaa tgttttggaa
     3661 gttcctttct tgctagcaac ccaaattgat tcttatgcga agtttttgca gctggaaaat
     3721 gcttttgaca aacgtaccga tgacggtctg caggcagcat ttaattctat tttcccgatt
     3781 gtgagccata acggttatgc gcgattggag tttgtgcatt acacattggg cgagcctttg
     3841 ttcgatattc ccgaatgtca gttgcgcgga atcacttatg cagccccctt gcgcgcgcgt
     3901 atccgtttgg tgattttgga taaggaagca tctaaaccga cggtaaaaga agttcgtgaa
     3961 aacgaagtgt atatgggcga aattccgttg atgaccccga gcggttcttt tgtgattaac
     4021 ggcacagagc gtgtgattgt ctcccagttg caccgttcgc ccggcgtatt cttcgagcat
     4081 gacaaaggta agacgcactc ttccggcaaa ttgttattct ccgcccgcat cattccctac
     4141 cgtggttcat ggttggattt tgaatttgat ccgaaagatt tgctgtattt ccgtatcgac
     4201 cgccgccgta aaatgccggt aacgattttg ttgaaggctt tgggctacaa caatgagcaa
     4261 atcttggata ttttctacga caaagaaacg ttctatttgt cttcaaacgg tgttcaaacc
     4321 gatttggtcg caggccgtct gaaaggcgaa actgccaagg tcgatatctt ggataaagaa
     4381 ggcaatgtat tggttgccaa aggtaagcgt attactgcga aaaatatccg tgatattacc
     4441 aatgcaggcc tgacccgttt ggatgtagaa ccggaaagcc tgctgggcaa agcattggct
     4501 gccgatctga ttgattcgga aaccggcgag gtattggctt ctgccaatga tgaaattaca
     4561 gaagagttgt tggccaaatt tgatatcaac ggcgtaaaag aaattacgac cctttacatc
     4621 aatgagttgg atcagggtgc ttatatctcc aataccttgc gcacggatga gactgccggc
     4681 cggcaggcgg cgcgtgttgc gatttaccgt atgatgcgtc cgggcgaacc gcccaccgaa
     4741 gaggcagtcg agcaattgtt taaccgcttg ttcttcagtg aagacagcta cgatttgtcc
     4801 cgcgtaggtc gtatgaaatt taatacgcgc acatacgaac aaaaactgtc cgaagcccaa
     4861 caaaactctt ggtacggccg cctgctgaac gaaacgtttg ccggtgctgc cgaaaaaggc
     4921 ggttatgtcc tgagcgtcga agatattgtc gcctcgattg cgactttggt cgagttgcgt
     4981 aacggccatg gtgaagttga cgatatcgat cacttgggca accgccgagt acgttcggta
     5041 ggcgagctga ctgaaaacca attccgcagc ggtttggccc gtgtggaacg tgctgtaaaa
     5101 gaacgtttga atcaggcgga atcagaaaac ttgatgccgc acgatttgat taatgcaaaa
     5161 cctgtttctg ccgctattaa agaattcttc ggctccagcc aattgagtca gtttatggat
     5221 cagaccaacc ccttgtctga agtaacccat aaacgccgcg tatctgcatt gggtccgggc
     5281 ggtttgaccc gcgaacgtgc cggcttcgag gtacgggacg tgcatccgac ccactacggc
     5341 cgcgtatgtc cgattgaaac gcctgaaggt ccgaacatcg gtttgatcaa ctcattgtcc
     5401 gtttatgcgc gcaccaatga ttacggtttc ttggaaacgc cttaccgccg cgttatcgac
     5461 ggcaaagtaa ccgaggaaat cgattacttg tctgccatcg aagaaggccg ctatgtgatt
     5521 gcacaggcga atgccgattt ggattcagat ggcaatctga ttggcgattt ggttacctgt
     5581 cgtgaaaaag gcgaaaccat tatggcaacg cccgaccgcg tccaatatat ggacgtggca
     5641 accggccagg tggtatccgt tgcggcatcc ctgattccgt tcttggaaca tgatgacgcg
     5701 aaccgcgcat tgatgggtgc caacatgcaa cgtcaggcag tgccttgctt gcgtcctgaa
     5761 aaaccgatgg tcggtaccgg tatcgagcgt tccgttgccg ttgactctgc tactgcaatc
     5821 gttgcccgcc gaggcggcgt ggtcgagtat gtcgatgcca accgtgttgt gattcgtgtc
     5881 catgacgacg aagcgactgc cggcgaagtg ggtgtcgata tttacaactt ggttaaattt
     5941 acccgttcca accagtctac caatatcaat cagcgtcctg ccgtcaaagc cggcgatgtt
     6001 ttgcaacgcg gcgatttggt ggccgatggc gcgtccaccg atttgggcga attggctttg
     6061 ggtcaaaata tgaccatcgc cttcatgccg tggaacggtt acaactacga agactcgatt
     6121 ctgatttccg aaaaagtggc tgcggatgat cgttacactt cgattcacat tgaggaattg
     6181 aatgtcgttg cccgcgatac caagctgggt gcggaagaca ttacccgcga tattccgaac
     6241 ttgtccgagc gtatgcaaaa ccgcttggac gaatccggta tcgtttacat cggtgcagaa
     6301 gtagaagccg gcgatgtgtt ggtaggcaaa gtaacgccta aaggcgaaac ccaactgacg
     6361 ccggaagaaa aactgttgcg cgccatcttc ggcgaaaaag cgtctgacgt aaaagatact
     6421 tcactgcgta tgcctaccgg tatgagcggt acggttatcg acgttcaagt cttcactcgt
     6481 gaaggtattc aacgcgacaa acgcgcccaa tccattatcg attccgagtt gaaacgctac
     6541 cgtttggatt tgaacgacca attgcgtatt ttcgacaacg acgcattcga ccgtatcgaa
     6601 cgtatgattg tgggtcaaaa agccaatggt ggtccgatga agctggctaa aggcagcgaa
     6661 attactaccg aatatttggc gggtctgccg agcaggcacg attggttcga tatccgtctg
     6721 accgatgaag atttggccaa gcagttggaa ctgattaaag tgagcctgca acaaaaacgc
     6781 gaagaagcgg acgagttata cgaaatcaag aagaaaaaac tgacccaagg cgacgaattg
     6841 caacccggcg tacaaaaaat ggtgaaagtt tttatcgcca tcaaacgccg tctgcaagcc
     6901 ggcgacaaaa tggcgggccg ccacggtaac aaaggcgtgg tatcgcgcat tctgccagtg
     6961 gaagacatgc cttacatggc ggacggccgt ccggtagaca tcgtactgaa cccattgggc
     7021 gtaccttccc gtatgaacat cggtcagatt ttggaagttc acttgggttg ggcagcaaaa
     7081 ggtatcggcg agcgtatcga ccgtatgctg aaagagcaac gcaaagcagg cgagttgcgc
     7141 gagttcttga acagactcta caacggcagc ggtaagaaag aagatttgga cagcctgaca
     7201 gatgaagaaa tcatcgaatt ggcttccaac ctgcgtaaag gtgcatcttt cgcttctcct
     7261 gtattcgacg gtgcgaaaga gtctgaaatc cgcgaaatgt tgaacttggc ttacccaagc
     7321 gaagatcctg aggttgagaa actgggcttc aacgacagta aaactcaaat cacgctgtat
     7381 gacggccgtt caggcgaagc atttgatcgc aaggttacag tcggtgtgat gcactatctg
     7441 aaactgcacc acttggttga cgaaaaaatg cacgcccgtt ctaccggtcc atacagtctg
     7501 gttacccaac agcctttggg cggtaaagct cagttcggtg gccaacgttt cggtgagatg
     7561 gaggtttggg cattggaagc atacggtgcg gcatacacgc tgcaagagat gctgactgtg
     7621 aagtctgatg acgtgaacgg ccgtaccaaa atgtacgaga acatcgtcaa aggcgaacac
     7681 aaaatcgatg ccggtatgcc cgagtccttc aacgtattgg ttaaagagat tcgttcactg
     7741 ggcttggata tcgatttgga acgctactaa gcagaagttt tcagacggcc tttcaaggtc
     7801 gtctgaaaaa gcggtttcag aataagaatg aagcaatcgg catttaggcc gtctgaaatc
     7861 gaaagtaccg tttcccaata tcgaaaatcc gccacgcggt aaaaatactt ccttcaagga
     7921 gcaaaaatga atttgttgaa cttatttaat ccgttgcaaa ctgccggcat ggaagaagag
     7981 tttgatgcca tcaaaatcgg cattgcttct cccgaaacca tccgttcatg gtcttacggc
     8041 gaagttaaaa aacctgaaac catcaactac cgtacgttca aacctgagcg tgacggtctg
     8101 ttctgcgcca aaatctttgg tccggtcaaa gactacgaat gcttgtgcgg aaaatacaaa
     8161 cgcttgaaat ttaaaggcgt aacctgtgaa aaatgcggcg tagaagtgac cctgtccaaa
     8221 gtgcgccgcg aacgcatggg ccacattgaa ttggcagcac ccgttgccca tatttggttc
     8281 ttgaaatccc tgccttcccg cttgggtatg gtactggaca tgactttgcg cgacatcgaa
     8341 cgcgtattgt actttgaagc atttgtggta accgaccccg gtatgactcc gctgcaacgc
     8401 cgccaattgc tgactgaaga cgattactac aacaaactgg acgaatacgg cgatgacttc
     8461 gatgccaaaa tgggtgcgga aggtatccgc gaattgctgc gtaccttgaa tgtggcgggc
     8521 gaaatcgaaa tcctgcgcca agagttggaa tcgaccgggt ccgacaccaa aatcaaaaaa
     8581 atcgccaaac gtttgaaagt attggaagcc ttccaccgtt ccggtatgaa gctggaatgg
     8641 atgattatgg atgtgctgcc ggtattgccg cctgatttgc gtccgttggt tccattggat
     8701 ggcggtcgtt ttgccacttc cgatttgaac gatttgtacc gtcgcgtcat caaccgtaac
     8761 aaccgtctga aacgtctgtt ggaactgcat gcgcccgaca ttatcgtccg caacgaaaaa
     8821 cgtatgttgc aagaagcggt cgactctctg ttggataacg gccgtcgcgg taaagccatg
     8881 accggcgcca acaaacgccc gctgaaatca ttggcagaca tgattaaagg taaaggcggt
     8941 cgcttccgtc aaaacctgtt gggcaaacgt gtggactact ccggccgttc cgtgattacc
     9001 gtaggcccat acctgcgtct gcaccaatgc ggtctgccga aaaaaatggc tttggaactg
     9061 ttcaaaccgt tcattttcca caaattggaa aaacaaggtt tggcctctac cgttaaagca
     9121 gcgaaaaaat tggtagagca agaagtaccg gaagtatggg acatcttgga agaagtcatc
     9181 cgcgaacatc cgattatgct gaaccgtgcg ccgaccctgc accgtttggg tattcaagcg
     9241 ttcgaaccta tcttgattga aggtaaagcg attcagttgc acccattggt gtgtgctgcg
     9301 ttcaacgccg actttgacgg cgaccaaatg gcggtacacg ttccattgag cttggaagca
     9361 caaatggaag cacgcacgct gatgctggct tcaaacaacg tattgtctcc tgccaacggc
     9421 gaaccgatta tcgtaccttc ccaagacatc gtattgggcc tgtactacat gacccgcgac
     9481 cgtatcaatg ccaaaggcga gggcagcctg tttgccgatg tgaaagaagt gcatcgcgca
     9541 taccatacca aacaggttga actgggtacg aaaattaccg tacgtctgcg cgaatgggtg
     9601 aaaaacgaag caggtgagtt tgagcctgtc gttaaccgtt acgaaacaac cgtcggccgt
     9661 gcattgttga gcgaaatcct gccgaaaggc ctgccgtttg aatatgtcaa caaagcgttg
     9721 aagaaaaaag aaatttctaa actgattaac gcatcgttcc gcctgtgcgg cttgcgcgat
     9781 acggttatct ttgctgacca cctgatgtac accggtttcg gatttgcggc aaaaggcggt
     9841 atttccattg ccgttgacga tatggaaatt ccaaaagaaa aagtggcctt gctggctgaa
     9901 gccaatgccg aggttaaaga aatcgaagac caataccgtc aaggtttggt taccaacggc
     9961 gaacgctaca acaaggtggt cgatatttgg ggtcgtgccg gcgataagat tgctaaagcg
    10021 atgatggaca acttgtccaa acaaaaagtt atcgaccgtg acggcaacga agtcgatcaa
    10081 gagtcattca actccattta tatgatggcg gactccggtg cccgtggttc tgcagctcag
    10141 attaaacagt tgtccggtat gcgtggcttg atggcaaaac ctgacggctc gattattgaa
    10201 acgccgatta cctcaaactt ccgtgaaggt ctgaccgtat tgcaatactt tattgcgacc
    10261 cacggtgcgc gtaagggttt ggcggatacc gcattgaaaa ccgcgaactc cggttacctg
    10321 acccgtcgtc tggtagacgt aactcaagat ttggtcgttg ttgaagacga ttgcggtact
    10381 tcagacggct ttgtcatgaa ggcagtggta caaggcggtg atgtgattga agcattgcgc
    10441 gagcgtattt tgggccgtgt tactgcgtct gacgttgtcg atccgtcaag cggcgagacc
    10501 ttggttgaag caggcacgtt gttgactgaa aaactggtgg atatgattga ccaatccggt
    10561 gtcgatgaag tcaaagtccg tactccgatt acttgtaaaa cccgccacgg tttgtgcgcg
    10621 cactgttacg gccgcgactt ggcgcgcggc aaactggtca atgccggaga ggcagtcggc
    10681 gtgattgccg cccaatcaat cggcgaaccg ggtacccagc tgactatgcg tacgttccac
    10741 atcggtggtg cggcatcccg tgcggcagca gccagccaag tggaagccaa atccaacggt
    10801 acggcacgat tcagcagcca aatgcgttat gttgccaaca ataaaggcga gttggttgtc
    10861 atcggccgtt cttgtgaagt cgtgattcac gatgacatcg gccgtgaacg cgaacgccac
    10921 aaagtacctt acggtgccat cctgctggta caagacggta tggccattaa agccggtcaa
    10981 accttggcaa cctgggatcc gcatacccgt ccgatgatta ccgaacacgc aggtatggtg
    11041 aaattcgaaa acgtggaaga gggcgttacc gttgccaaac aaaccgatga tgtaaccggt
    11101 ttgtccactt tggtagtgat cgacggtaaa cgtcgttcct ctagtgcttc caaactgctg
    11161 cgtccgactg tgaaactctt ggacgaaaac ggcgtggaaa tctgtattcc cggtacttct
    11221 actccggtat ccatggcatt ccccgttggt gcggtgatta ccgtacgcga aggtcaggaa
    11281 atcggtaaag gcgacgtatt ggcgcgtatc ccgcaagcct cttccaaaac ccgcgacatt
    11341 accggtggtc tgccgcgcgt tgccgaattg tttgaagcac gcgtgccgaa agatgccggt
    11401 atgttggcgg aaattaccgg taccgtttcc ttcggcaaag agaccaaagg caagcaacgt
    11461 ctgattatta ccgacgtgga cggcgtagca tacgagactt tgatttccaa agagaaacag
    11521 attttggtac acgacggtca agtggtaaac cgcggcgaaa ccattgtgga cggcgcggtc
    11581 gatccgcacg atattctgcg tctgcaaggt atcgaagcac tggcacgcta cattgtccaa
    11641 gaggtgcaag aggtttaccg tctgcaaggt gtgaagattt ccgacaaaca catcgaagtc
    11701 atcatccgtc aaatgttgcg ccgtgtgaac attgcggatg ccggcgaaac cggcttcatt
    11761 accggcgagc aggtcgaacg cggcgatgtg atggctgcca atgaaaaagc tttggaagaa
    11821 ggcaaagaac cggcacgtta cgaaaacgta ttgctgggta ttaccaaagc ctccctgtct
    11881 accgacagct tcatttctgc cgcatcgttc caagaaacga cccgcgttct gaccgaagcc
    11941 gcgattatgg gcaaacaaga cgagctgcgc ggtctgaaag agaacgtgat tgtcggtcgt
    12001 ttgattcctg ctggtactgg tttgacttac caccgcagcc gtcatcaaca atggcaagag
    12061 gtggagcagg agactgctga aacccaagta acggatgaat aatctttggt gcgtttattc
    12121 aatacaaaac cgcaagcttt aggcttgtgg tttttctttc agacggcatt taaattatta
    12181 gtgatttcct ttccggtaat agttgtttat gagcataagg gacctaaatg tttatctgaa
    12241 aaaagaaaaa tgatgaatct tcctgatctc acgcttgact gtctgcttgc aataaaaata
    12301 taattccact cttgccgaca tggtgtcggc aagtatttaa ctcaacagga cgagaaaata
    12361 tgccaactat caaccaattg gtacgcaaag gccgtcaaaa gcccgtgtac gtaaacaaag
    12421 tgcccgcact ggaagcctgc ccgcaaaaac gcggcgtgtg cacccgtgta tacacgacta
    12481 cccctaaaaa acctaactct gcattgcgta aagtatgtaa agtccgcctg accaacggtt
    12541 ttgaagtcat ttcatacatc ggcggcgaag gccacaacct gcaagagcac agtgtcgtat
    12601 tgattcgcgg cggtcgtgta aaagacttgc caggtgtgcg ttaccacact gtacgcggtt
    12661 ctttggatac tgcaggcgtt aaagaccgta aacaagcccg ttccaaatac ggtgctaagc
    12721 gtcctaaata attactggga cttaaatagg cacgtcggcc gcctaagctg aacaacggcc
    12781 gagtaagtga atactcaatt gggtattcat gggaatagac ccgactgaat agattaaagg
    12841 aaattaaaat gccaagacgt agagaagtcc ccaagcgcga cgtactgcca gatcctaaat
    12901 tcggcagcgt cgagttgacc aaattcatga acgtattgat gattgacggt aaaaaatccg
    12961 ttgccgagcg tatcgtttac ggtgcgttgg aacagattga gaaaaaaacc ggcaaagtag
    13021 caatcgaagt atttaacgaa gccattgcaa acgccaagcc tatcgtggaa gtgaaaagcc
    13081 gccgtgtagg tggtgcaaac taccaagttc ctgttgaagt tcgtccttca cgccgtttgg
    13141 ctttggcaat gcgctgggtt cgcgatgcgg cccgcaaacg tggtgagaaa tccatggacc
    13201 tgcgtttggc aggcgaattg attgatgcgt ccgaaggtcg tggcggtgcg ttgaaaaaac
    13261 gtgaagaagt acaccgtatg gctgaagcca acaaagcatt ctctcacttc cgtttctaat
    13321 tttgaaaggc taataaaatg gctcgtaaga ccccgatcag cctgtaccgt aacatcggta
    13381 tttccgccca tatcgatgcg ggtaaaacca cgacgacaga acgtattttg ttctatactg
    13441 gtttgaccca caagctgggc gaagtgcatg acggtgcggc tactaccgac tacatggaac
    13501 aagagcaaga gcgcggtatt accattacct ccgctgccgt tacttcctac tggtccggta
    13561 tggcgaaaca attccccgag caccgcttca acatcatcga caccccggga cacgttgact
    13621 ttaccgtaga ggtagagcgt tctatgcgtg tattggacgg cgcggtaatg gtttactgcg
    13681 cggtgggcgg tgttcaaccc caatctgaaa ccgtatggcg gcaagccaac aaataccaag
    13741 tgccgcgctt ggcgtttgtc aataaaatgg accgtcaggg tgccaacttc ttccgcgttg
    13801 tcgagcaaat gaaaacccgt ttgcgcgcaa accctgtacc tatcgtcatt ccggttggtg
    13861 cggaagacaa cttcagcggt gtggttgatt tgttgaaaat gaaatccatc atttggaatg
    13921 aagccgataa aggtacaacc tttacctatg gcgatattcc tgccgaattg gtcgaaactg
    13981 ccgaagaatg gcgtcaaaat atgattgaag ccgcagccga agccagcgaa gaactgatgg
    14041 acaaatactt aggcggcgac gagctgaccg aagaagaaat cgtaggcgcg ttgcgtcaac
    14101 gtactttggc aggcgaaatt cagcctatgc tgtgtggttc tgcatttaaa aacaaaggtg
    14161 ttcaacgtat gttggacgca gttgtagaat tgctgccagc tcctaccgat attcctccgg
    14221 ttcaaggtgt caacccgaat accgaggaag ccgacagccg tcaagccagc gatgaagaga
    14281 aattctctgc attggcgttc aaaatgttga acgacaaata cgtcggtcag ctgaccttta
    14341 tccgcgttta ctcaggcgta gtaaaatccg gcgataccgt attgaactcc gtaaaaggca
    14401 ctcgcgaacg tatcggtcgt ttggtacaaa tgactgccgc agaccgtact gaaatcgaag
    14461 aagtacgcgc cggcgacatc gcagccgcta ttggtctgaa agacgttact accggtgaaa
    14521 ccttgtgtgc ggaaagcgcg ccgattatct tggaacgtat ggaattcccc gagccggtaa
    14581 tccatattgc cgttgagccg aaaaccaaag ccgaccaaga gaaaatgggt atcgccctga
    14641 accgcttggc taaagaagac ccttctttcc gtgtccgtac agacgaagaa tccggtcaaa
    14701 ccattatttc cggtatgggt gagctgcact tggaaattat tgttgaccgt atgaaacgcg
    14761 aattcggtgt ggaagcaaat atcggtgcac ctcaagtggc ttaccgtgaa actatccgca
    14821 aagccgttaa agctgaatac aaacacgcga aacaatccgg tggtaaaggt caatatggtc
    14881 acgttgtgat tgaaatggaa cctatggaac cggggggcga aggttacgag tttatcgatg
    14941 aaattaaagg tggcgtgatt cctcgcgaat tcattccgtc tgtcgataaa ggtatccgcg
    15001 atacattgcc taacggtatc gttgccggct atcctgtagt tgatgtacgt atccgtctgg
    15061 tattcggttc ttaccatgat gtcgactctt cccaattggc atttgaattg gccgcttctc
    15121 aagcgtttaa agaaggtatg cgtcaagcat ctcctgccct gcttgagccg attatggcag
    15181 ttgaagtgga aactccggaa gaatacatgg gcgacgtaat gggcgacttg aaccgccgtc
    15241 gcggtgttgt attgggtatg gatgatgacg gtatcggcgg taaaaaagtc cgtgccgaag
    15301 tacctctggc agaaatgttc ggttattcga ccgacctgcg ttctgcaacc caaggccgcg
    15361 ctacttactc tatggagttc aagaaatatt ctgaagctcc tgcccacata gctgctgctg
    15421 taactgaagc ccgtaaaggc taatcaggca aataggtcgt ctgaaaggct gaaatgattt
    15481 ttcagacggc attgttcttt aatcgatctt taatgtaaag gaattagc
//
LOCUS       DAWGKF010000037        15225 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.037, whole genome shotgun sequence.
ACCESSION   DAWGKF010000037 DAWGKF010000000
VERSION     DAWGKF010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15225)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15225)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15225
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.037"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..139)
                     /locus_tag="WHR07_000799"
     CDS             complement(<1..139)
                     /locus_tag="WHR07_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HEZ2130039.1"
                     /translation="MSVQTVTYNKFFMNTNQPAVYDPLTRALHWLTVAGFIGILTTIV
                     LW"
     gene            381..1535
                     /gene="obgE"
                     /locus_tag="WHR07_000800"
     CDS             381..1535
                     /gene="obgE"
                     /locus_tag="WHR07_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEZ2130040.1"
                     /translation="MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGS
                     VWAEADENTNTLVEYRFVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTD
                     EIVADLTYHGQRVCLAKGGKGGLGNIHFKSSVNRAPKQSTPGEEGEARSLQLELKVLA
                     DVGLLGMPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLI
                     EGAAEGAGLGHRFLKHLSRTGLLLHVVDLAPFDETVNPAEEALAIINELRKYDEELYG
                     KPRWLVLNKLDMLDEEEAQTRTAAFLEAVGWDYPKPDDRFQFDMETPRLFQISALTHQ
                     GTQELVHQINQYLTEKKRIEAEKAEAEKAAANVEIIEQQPKTDTGVFKPE"
     gene            1618..2667
                     /locus_tag="WHR07_000801"
     CDS             1618..2667
                     /locus_tag="WHR07_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEZ2130041.1"
                     /translation="MSSNQYIQSLELTNFTVLPNDTFEFSENLNVIVAENGCGKTHLL
                     KILYSLLEVTSNTKNRLLKTELQKSFADKLLNVFRPDSLGRLSKRLQGRGRTEIVLKL
                     QNGTTHSSLNFSSNSSSQVNVQSIGLKENEYTPTPIFLPSRELITLCPWFTSLYQNQS
                     IPFEETWFDACMQLNHPLAKGPRETKIRELLEPIENAMGGKVSEEQGRFYLSLTNTGG
                     KIEAPLVAEGLRKFVMIARLIATGALLDKGYLFWDEPEANLNPKLIKVAARIIWSLSQ
                     QGIQVFIATHSLFLLRELELLKLENNTDLPVRFFSLIASDDGTKVEQGNSINDLNTLI
                     LLDENIMQADRYLNI"
     gene            3355..4776
                     /locus_tag="WHR07_000802"
     CDS             3355..4776
                     /locus_tag="WHR07_000802"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEZ2130042.1"
                     /translation="MTTIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVM
                     VVFDMIARWLRECGYPLTYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADA
                     LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSL
                     DDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFG
                     DTFDIHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFI
                     RVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTR
                     LYTTLKNTPPADPMPSEADDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQL
                     AGCLKALGGIIGLLQRDPTEFLQGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRI
                     RDLLNEHKIILEDNAGGTTWRRG"
     gene            4859..5638
                     /gene="xth"
                     /locus_tag="WHR07_000803"
     CDS             4859..5638
                     /gene="xth"
                     /locus_tag="WHR07_000803"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEZ2130043.1"
                     /translation="MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADL
                     SADMKNPHGMHGHWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFDR
                     LSVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLK
                     NWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGW
                     RIDYQMVTPELAAKAVSAHVYKDEKFSDHAPLVMEYDYAAE"
     gene            5625..5969
                     /locus_tag="WHR07_000804"
     CDS             5625..5969
                     /locus_tag="WHR07_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130044.1"
                     /translation="MLPNKVLGKYDWNVDGKTGIGAAWVVAAFILPILVWAIFMLSRM
                     QGWLAPTKANPTWALVWLLICMPCLLIASKCLGWKGWRRVVNIFACLTVCAILSVPAS
                     LLIAFTLRDLLK"
     gene            5980..6510
                     /locus_tag="WHR07_000805"
     CDS             5980..6510
                     /locus_tag="WHR07_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEZ2130045.1"
                     /translation="MQGFELEDLTLWLIRDAGEDQMWIDRWAISYPVVQMSEASAGQS
                     IGEWQAGLRTAFERIRGKYVAVVAHGAGAAAFLAWLYQADILTRKKIANIILVPQRPD
                     IFPDDAEHTFQRVRCPCRAALVVPEHGGVPHGWAQKQADLWNARLLVSPHSGSLNGML
                     GGWQWGMKLMQEMLLA"
     gene            complement(6603..7718)
                     /gene="asd"
                     /locus_tag="WHR07_000806"
     CDS             complement(6603..7718)
                     /gene="asd"
                     /locus_tag="WHR07_000806"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEZ2130046.1"
                     /translation="MKVGFVGWRGMVGSVLMQRMKEENDFAHIPEAFFFTTSNVGGAA
                     PDFGQAAKTLLDANNVAELAKMDIIVTCQGGDYTKSVFQALRDSGWNGYWIDAASSLR
                     MKDDAIIVLDPVNRNVIDNGLKNGVKNYIGGNCTVSLMLMALGGLFQNDLVEWATSMT
                     YQAASGAGAKNMRELISGMGAVHAQVADELADPAGSILDIDRKVSDFLRSEDYPKANF
                     GVPLAGSLIPWIDVDLGNGQSKEEWKGGAETNKILGRSDNPTVIDGLCVRIGSMRCHS
                     QALTLKLKKDLPISEIEAILAGANDWVKVIPNEKEASIRELTPAKVTGTLSVPVGRIR
                     KLGMGGEYISAFTVGDQLLWGAAEPLRRVLRIVLGSL"
     gene            7894..8475
                     /locus_tag="WHR07_000807"
     CDS             7894..8475
                     /locus_tag="WHR07_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEZ2130047.1"
                     /translation="MEEKNDYTDAASDNRNGQEIEVGIAGAGDRILAALLNQLFTFLV
                     LLVPFAGLIAFAIKNEGRIGGSEEIFGLLLGMTSFWVGLAGILVYTVVQIYYMSRDGQ
                     SLGKKIMRIRVLKTDGRNPGFVGTVLVREIAWSVLVAIIAAVIGLAVGDNGENAINLL
                     AFLANFVLLFMVKRDRRTLYDILADTVVVKLPK"
     gene            complement(8537..9391)
                     /gene="folD"
                     /locus_tag="WHR07_000808"
     CDS             complement(8537..9391)
                     /gene="folD"
                     /locus_tag="WHR07_000808"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HEZ2130048.1"
                     /translation="MSAQLINGKEVSQKRLQAVAEAVAQRQQNNLHTPCLAVVLVGGD
                     PASAVYVRNKKTSCQKCGIKSLSYELPESTSQEELLALVDRLNVDSEVDGILVQLPLP
                     KHLDSQAVLERISPDKDVDGFHPYNVGRLAVKMPLMRPCTPKGVMTLLEAYGIDPKGK
                     KAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAGADILVVGVGIPNFVKG
                     EWIKPGAVVIDVGINRLDDGSLCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTL
                     HAASLHDA"
     gene            9614..9691
                     /locus_tag="WHR07_000809"
     tRNA            9614..9691
                     /locus_tag="WHR07_000809"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9649..9651,aa:Pro,seq:tgg)
     gene            9716..9792
                     /locus_tag="WHR07_000810"
     tRNA            9716..9792
                     /locus_tag="WHR07_000810"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9750..9752,aa:Arg,seq:tct)
     gene            9820..9895
                     /locus_tag="WHR07_000811"
     tRNA            9820..9895
                     /locus_tag="WHR07_000811"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9853..9855,aa:His,seq:gtg)
     gene            10031..10537
                     /locus_tag="WHR07_000812"
     CDS             10031..10537
                     /locus_tag="WHR07_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional heptose 7-phosphate kinase/heptose
                     1-phosphate adenyltransferase"
                     /protein_id="HEZ2130049.1"
                     /translation="MVDAWSVPDFESKICPPEALSERLARLPRPLVFTNGCFDILHRG
                     HVTYLAQARSAGAALVLALNTDASVRRLGKDGDRPINPLENRAAVAAALESVDLVTWF
                     DGDTPAALIEAVKPEILVKGGDWAADKIVGAAETLARGGQVFSIPFLHQTSTTKTLAK
                     IRAAEGGK"
     gene            10534..12312
                     /locus_tag="WHR07_000813"
     CDS             10534..12312
                     /locus_tag="WHR07_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/type III pantothenate kinase"
                     /protein_id="HEZ2130050.1"
                     /translation="MTVLKLSHWRVLAELADGLPQHVSQLARMADMKPQQLNGFWQQM
                     PAHIRGLLRQHDGYWRLVRPLAVFDAEGLRELGERSGFQTALKHECASSNDEILELAR
                     IAPDKAHKTICVTHLQSKGRGRQGRKWSHRLGECLMFSFGWVFDRPQYELGSLSPVAA
                     VACRRALSRLGLDVQIKWPNDLVVGRDKLGGILIETVRTGGKTVAVVGIGINFVLPKE
                     VENAASVQSLFQTASRRGNADAAVLLETLLAELDAVLLQYARDGFAPFVAEYQAANRD
                     HGKAVLLLRDGETVFEGTVKGVDGQGVLHLETAEGKQTVVSGEISLRSDDRPVSVPKR
                     RDSERFLLLDGGNSRLKWAWVENGTFATVGSAPYRDLSPLGAEWAEKVDGNVRIVGCA
                     VCGEFKKAQVQEQLARKIEWLPSSAQALGIRNHYRHPEEHGSDRWFNALGSRRFSRNA
                     CVVVSCGTAVTVDALTDDGHYLGGTIMPGFHLMKESLAVRTANLNRHAGKRYPFPTTT
                     GNAVASGMMDAVCGSVMMMHGRLKEKTGAGKPVDVIITGGGAAKVAEALPPAFLAENT
                     VRVADNLVIHGLLNLIAAEGGESEHT"
     gene            12425..13249
                     /locus_tag="WHR07_000814"
     CDS             12425..13249
                     /locus_tag="WHR07_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEZ2130051.1"
                     /translation="MKWLFTLLAVLNIAVFGGTVGYKLAVKATGGVPENRAVENTPPA
                     TPAADNAAASVEDTAALLKPGDILTEEQAEQLRLKKEAEQKKLREKKQREEKARREKL
                     AAEKAQAERENGAADALCAAQASLTMDEDDYHRIKGLLGKWSHVASRSVEKRTAKAKP
                     ADKTYRVVLPVSADAENQAAELSAKGFNPIPFDGALSLGVGNSRENAQALQNRLAGAG
                     FGGAHIVEHFAEADRQDDSLSVSRMTVLFTGVNAADADEIRKITSLYGKLNLKSCK"
     gene            complement(14012..14800)
                     /locus_tag="WHR07_000815"
     CDS             complement(14012..14800)
                     /locus_tag="WHR07_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HEZ2130052.1"
                     /translation="MLTLYGETFPSRLLLGTAAYPTPEILKQSIQTAQPAMITVSLRR
                     AGSGGEAHGQGFWSLLQETGVPVLPNTAGCQSVQEAVTTAQMAREVFETDWIKLELIG
                     DDDTLQPDVFQLVEAAEILIKDGFKVLPYCTEDLIACRRLLDAGCQALMPWAAPIGTG
                     LGAVHAYALNVLRERLPDTPLIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVN
                     MARAFALAVESGRLAFEAGPVEARDKAQASTPTVGQPFWHSAEY"
     gene            complement(15014..15208)
                     /gene="thiS"
                     /locus_tag="WHR07_000816"
     CDS             complement(15014..15208)
                     /gene="thiS"
                     /locus_tag="WHR07_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HEZ2130053.1"
                     /translation="MNIILNGGPAELHGTSVADLIAQTAPQQPFAVAVNTVFIPKGAY
                     AETVLNENDKIDIVRPVVGG"
BASE COUNT         3630 a         3848 c         4231 g         3516 t
ORIGIN      
        1 tccacaggac aattgtggtc agaatgccga tgaaaccggc aacggtcagc cagtgcagcg
       61 cgcgtgtcaa cgggtcgtaa acggcaggtt ggtttgtgtt cataaaaaac ttattatatg
      121 taacggtttg aacggacatt ccgtcgggtc ggaatgtcaa aaaggcgcga ttgtaccaaa
      181 gaagttggac ataattttgt ttgcaggctg aagatttgct taaaaattca ttaagatggg
      241 cggaacaaat agtttgggta cggcgtgttg aaataccgct tatcccttat aatagcgtcc
      301 gaaattctgt tcagacggca tcaaaacaca cggtaatccg tctgaacccc ccatttgaaa
      361 ccaacaaaca agagcattga atgaaattca tcgacgaagc aaaaatcgaa gtcgccgcag
      421 gcaaaggcgg taatggcgca accagtttcc gccgcgaaaa attcgtaccg cgcggcggcc
      481 cggacggcgg cgacggcggc aaaggcggta gcgtctgggc ggaagccgac gaaaacacca
      541 acaccctcgt cgaataccgc ttcgttaaac gctaccaagc caaaaacggc gaaaaaggcc
      601 acggttccga ccgttacggc gcaggtgcgg acgacatcgt cctcaaaatg cccgtcggca
      661 ccctcatccg cgacctcgac accgacgaaa tcgttgccga cctcacttac cacggacagc
      721 gcgtctgcct agccaaaggc ggcaaaggcg gcttgggcaa catccacttc aaatcctccg
      781 tcaaccgcgc cccaaaacaa tccacgcccg gcgaagaagg cgaagcccgt tccctgcaac
      841 tcgaactcaa agtcctcgcc gatgtcggct tattgggtat gcccaacgcc ggcaaatcca
      901 ccctgattac cgccgtatcc gccgcacgcc ccaaaatcgc caactacccc ttcaccaccc
      961 tgcatccaaa cttaggcgtg gtacgcatcg acgaaaacca cagcttcgtg atggccgaca
     1021 tccccggcct gattgaaggc gcggcagaag gcgcgggttt ggggcatcgt ttcctcaaac
     1081 acttatcgcg caccggatta ttgctgcacg tcgtcgattt ggcgcccttc gacgaaaccg
     1141 tcaaccctgc cgaagaagca cttgctatca tcaacgaatt gcgcaaatac gatgaagaac
     1201 tttacggcaa accgcgctgg ctggtgctga ataaactcga catgcttgac gaagaagaag
     1261 cccaaacgcg cactgccgcc ttcctcgaag ccgtcggctg ggactacccc aaacccgacg
     1321 accgtttcca atttgacatg gaaaccccgc gcctcttcca aatcagcgcg ctgacccacc
     1381 aaggcacgca ggaattggta caccaaatca accaatacct gaccgagaaa aaacgtatcg
     1441 aagctgaaaa agccgaagcg gagaaagcag cggcaaatgt tgaaattatc gaacagcagc
     1501 ctaaaacgga tacgggcgtg tttaagccgg agtgaaaaaa gaaagggttt cagacgatat
     1561 ttgttctaca aaaggttgtt tgaaacaatt ttaaagcaag attgaaatgg attaaaaatg
     1621 tcatctaacc aatatatcca gtcgcttgag ttgacaaact ttaccgttct tccaaacgat
     1681 acttttgaat tttctgaaaa tctcaatgtt attgttgccg aaaacggttg tggcaaaaca
     1741 catttgttaa aaattttata cagcctgcta gaagtaacat ctaacaccaa aaacagatta
     1801 ctgaaaacag aattgcaaaa aagttttgcc gataaattac tgaatgtttt ccgtcccgat
     1861 tccttgggca ggttgagcaa acgtttgcag gggcgcgggc gtacggaaat cgttttaaaa
     1921 ctgcaaaacg gcactacgca tagtagtctg aatttttcca gtaactcatc atcgcaagtc
     1981 aatgttcaaa gcatcggatt gaaagaaaat gaatatactc cgacacctat cttcttaccc
     2041 agccgcgaat taattacact ttgcccttgg ttcacttctt tgtatcaaaa ccaaagcatc
     2101 cctttcgaag aaacttggtt tgatgcctgt atgcaattaa atcacccgct tgccaaaggc
     2161 cccagagaaa caaaaattcg agaattgctc gaacctattg agaacgcgat gggcggaaaa
     2221 gtatctgaag aacaaggaag gttttatcta tcgctgacaa atacgggcgg taagattgaa
     2281 gcacctttgg tagcagaggg tttgcggaaa tttgtcatga ttgcccggtt aatcgcaaca
     2341 ggggcattgc tggataaagg ctatctattt tgggatgaac cggaagctaa tctgaatcct
     2401 aaattgatca aagtggctgc ccgtattatt tggtctttat ctcaacaggg tattcaggtt
     2461 tttattgcaa cacactcttt attcttattg agagaattgg aacttttgaa gcttgaaaat
     2521 aacacggatt tacctgtacg ttttttctcg ttgattgctt ccgatgatgg aacaaaagtg
     2581 gagcaaggga acagtattaa tgatttgaac acattgatat tgttagatga aaacattatg
     2641 caggcagaca ggtatctgaa tatttgaggt taagctatga ctacaatcac agaaaagaga
     2701 ttaacctttg cttttcctga agattattac gttaccaagt atgacgaatg ggaacattat
     2761 aaaatttttc agaacagttg taatttacgt aataaaattg atacaaatga aaagggaaag
     2821 aacgggataa atcaaagtgt agatgacgat aatggcagct caggtgtaga tataatagcc
     2881 cttcatgagt cgacactttg gctaatcgaa attaaagatt attaccgact tgggcttgag
     2941 ccaaatgccc aatcaataga tgaaaaactt tctgacctac catatttaat cgcaagaaaa
     3001 attcgagatt cattggcagg attggtttct gctaaattta aagcagcaaa acaggaagaa
     3061 aaagattttt ctcgcttggc tttagattgt aacgaaataa aaatagtcct tcatattgaa
     3121 atgcctagta taagaagtaa actttatccc tcgtcatcag atttagcaaa cttattaaaa
     3181 gataagttta aattatcaga atttacaaaa aattttgcaa actgttatgc agaaccaatt
     3241 ttcacaaata tcagccatat taataatccg caactgcgta atgttccttg gtccgtatct
     3301 acaggaacag aacagaaatt atcatccgag caacaaagat taatccataa tcccatgacc
     3361 accatctaca acacccttac ccgccaaaaa gaaccctttg cccccatcga ccctgaaaac
     3421 gtgcgtatgt acgtttgcgg catgactgtt tacgattatt gccacttagg ccatgcccgt
     3481 gtgatggttg tgttcgacat gattgcccgt tggttgcgtg agtgcggcta tccgctcact
     3541 tatgtacgca acatcaccga catcgacgat aaaatcattg cccgtgcggc tgaaaacggc
     3601 gagaccatcg gcgagctgac tgcgcgtttc attcaggcta tgcacgaaga tgccgatgct
     3661 ttgggtgtgt tgcgtcccga tatcgagccg aaggcgacgg aaaacattcc gcaaatgatt
     3721 gccatgattg aaaccctgat tcaaaacggc aaggcatatc ctgccgcaaa tggcgacgtt
     3781 tactacgccg tgcgtgagtt tgccgcttac ggacaactgt cgggcaaatc gttggacgac
     3841 ctgcgcgcgg gcgaacgcgt ggaagtggac ggtttcaaac gcgatccgct tgattttgta
     3901 ttgtggaaag cggcgaaagc aggcgaaccg gcgtgggaaa gcccgtgggg caacggccgt
     3961 ccgggttggc acattgaatg ctctgccatg agtgaaaacc tgttcggcga taccttcgac
     4021 atccacggcg gcggcgcgga tttgcaattc ccgcatcatg aaaacgaaat cgcccaaagc
     4081 gtcggtgcca gcggtcatac ctgcggccac gaccacgcac aaacccacca cggtcaaagc
     4141 attgccagcc acgtcaaata ttggctgcac aacggcttta tccgcgtgga cggcgaaaaa
     4201 atgtccaaat cgttgggcaa cttcttcact atccgcgaag tgttgaaaca atacgacccc
     4261 gaagtcgtgc gcttcttcat cctgcgcgcc cactaccgca gcccgttgaa ctattccgac
     4321 gcgcatttgg acgacgcaaa aggcgcgttg acccgtctat acaccacctt gaaaaatacg
     4381 ccacccgccg atccgatgcc gtctgaagcc gacgatgact acacgcgccg cttttatgtt
     4441 gcgatgaatg atgattttga tacggtgaaa gcggtggcgg tgttgttcga acttgccggc
     4501 gaagtgaaca aaaccaatga cgcgcaactg gcaggctgcc tgaaagcctt gggcggcatc
     4561 atcggactgc tgcaacgcga cccgaccgag ttcctgcaag gcggcgcggc ttcagacggc
     4621 ctctccaacg aagaaatcga agacttgatt gcccggcgga aacaggcgcg ctccgataaa
     4681 aactgggcgg aatccgaccg cattcgcgac cttctgaacg aacacaaaat cattttggaa
     4741 gacaacgccg gcggcacgac ttggcggcgc ggttgaaatc catcgaaaag ggtaaatgtg
     4801 ccgcattttg cccttttttg ttcagacggc atttttattg tgagaactta tttttattat
     4861 gcttaaaatc atttccgcca acgtcaacgg catccgctcc gcctacaaaa aaggttttta
     4921 cgaatatatc gccgcatcgg gcgcggacat tgtctgcgtg caggaactca aagcgcagga
     4981 ggctgatttg tctgccgata tgaaaaatcc gcacgggatg cacggccatt ggcattgcgc
     5041 cgagaagcgc ggttacagcg gcgtggcggt gtacagcaaa cgcaaacccg acaatgtgca
     5101 aatcggtatg ggcattgaag aattcgacag ggaagggcgg tttgtgcgtt gcgatttcga
     5161 caggttgagc gttatttcgc tttacttgcc cagcggcagc agcgcggaag aacgccagca
     5221 ggtgaaatac cgtttccttg atgcgtttta ccctatgctc gaagcgatga aaaacgaagg
     5281 acgcgacatt gtcgtttgcg gcgactggaa catcgcccac caaaacatcg acctgaaaaa
     5341 ctggaaaggc aatcagaaaa attcgggctt cctaccggaa gaacgcgagt ggataggcaa
     5401 ggttatccac aagctcggtt ggacggatat gtggcgcacg ctttatcccg atgtgccggg
     5461 ctacacgtgg tggagcaacc gcgggcaggc gtatgcgaaa gatgtcgggt ggcgcatcga
     5521 ttatcagatg gttacgcccg aacttgccgc caaagccgtg tccgcacacg tttataaaga
     5581 tgaaaaattt tccgaccatg cgccgctggt catggagtat gactatgctg ccgaataaag
     5641 ttttgggtaa atatgattgg aatgtggacg gaaaaacagg aataggcgca gcatgggttg
     5701 tcgctgcgtt tatcctgccc atattggtgt gggcgatatt tatgttgtcg cggatgcaag
     5761 gctggcttgc gccgaccaag gcaaacccga catgggcgtt ggtgtggctg ctgatctgca
     5821 tgccctgcct gctgattgcg tccaaatgtt tgggttggaa aggctggcgg cgggtggtga
     5881 atatttttgc ctgcctgacc gtctgcgcca tattgagcgt acccgcttcg ctgctcatcg
     5941 cctttaccct ccgggacctg ctgaaatagg cggggcggta tgcagggttt tgaactcgaa
     6001 gatttgacgc tttggctgat acgcgatgcc ggagaggatc agatgtggat agaccgttgg
     6061 gcgatcagtt atcccgtcgt gcagatgtcc gaagcgtcgg ccggtcaaag cataggggaa
     6121 tggcaggcag ggcttcggac ggcatttgaa cgcatacgtg gcaaatacgt cgccgttgtc
     6181 gcacacggtg cgggcgcggc cgcatttttg gcgtggctgt atcaggcaga catcctgaca
     6241 cggaagaaaa ttgccaacat catccttgta ccgcagcgtc ccgatatttt tcccgacgat
     6301 gcggaacaca ctttccaacg cgtccgctgt ccctgccgtg ccgcattggt tgtacccgaa
     6361 cacggcggcg tgccgcacgg ttgggcgcaa aaacaggcgg atttgtggaa cgcccgcctg
     6421 ttggtttccc cgcattcggg cagtttgaac ggcatgctcg gcggctggca gtggggtatg
     6481 aagctgatgc aggaaatgtt gctggcgtga acgcttgcct tatcggaatt tcggttaact
     6541 ggggttgcaa ggaaaatgcc gtctgaaaca ggcttcagac ggcatttcca ttcaaacagg
     6601 gcttacaggc tgcccaacac gatacgcaat acgcggcgca gcggctcggc cgcgccccac
     6661 aagagctggt cgccgacggt gaacgcgctg atgtattcgc cgcccatacc cagtttgcgg
     6721 atgcgtccga cggggacgga cagcgtgccg gtaactttgg cgggggtcag ctcgcggatg
     6781 ctggcttctt tttcgttggg gatgactttc acccagtcgt tcgcgcctgc caaaatcgct
     6841 tcgatttcgg aaatgggcag gtcttttttc aacttcaggg taagggcttg gctgtggcag
     6901 cgcatagagc cgatgcggac gcacaggccg tcaatcacgg ttggattgtc gctgcggccg
     6961 aggattttgt tggtttccgc gccgcctttc cattcttctt tggactggcc gttgcccaaa
     7021 tccacgtcaa tccacggaat caggctgccg gcgagcggta cgccgaagtt ggctttcgga
     7081 tagtcttcgc tgcgcaggaa atcagatact ttgcggtcga tgtcgagaat cgagccggca
     7141 ggatcggcaa gttcgtccgc cacttgggcg tgaaccgcgc ccataccgct gatgagttcg
     7201 cgcatgtttt tcgcgcctgc gccggaagcg gcttggtagg tcatgctggt tgcccattcg
     7261 accaaatcgt tttggaacag gccgcccaaa gccatcagca tcagggaaac ggtacagttg
     7321 ccgccgatgt agtttttcac gccgtttttg aggccgttgt cgatgacgtt gcggttgacg
     7381 gggtcgagga cgataatcgc gtcgtctttc atacgcagcg aggatgccgc gtcaatccag
     7441 tagccgttcc agccgctgtc gcgcagggct tggaagacgg atttggtgta gtcgccgcct
     7501 tggcaggtaa cgatgatgtc catttttgcc agctcggcaa cgttgttcgc gtccaataat
     7561 gttttagccg cctgaccgaa atcaggggct gcgccgccga cgttggaagt ggtaaagaaa
     7621 aacgcttcgg gaatgtgggc gaagtcgttt tcttctttca tacgctgcat caaaaccgaa
     7681 ccgaccatac cgcgccagcc gacgaaacct actttcattg tgttgctcct tgaggaaaaa
     7741 tcgttaataa aattatgtat ggcgtaaagg aagcgtttta acgccgtatt gggaaaatgt
     7801 aaagttcttt atcgggattt ctttaagtat tggcgttttc ggtgtcgtgg cggtagaatc
     7861 ggggtcagtt aagaacaatt atcaggaacg gatatggaag aaaaaaacga ctacaccgac
     7921 gcggcatccg acaaccgcaa cgggcaggaa attgaagtcg gaattgccgg cgcaggcgac
     7981 cggatacttg ccgcgctgct gaaccaattg tttacctttt tggttttgtt ggtgccgttt
     8041 gccggactga ttgctttcgc catcaagaat gaaggcagga ttggcggcag tgaggaaata
     8101 ttcgggctgc ttttgggcat gacttccttt tgggtaggac tggcgggcat tttggtttat
     8161 accgtcgttc aaatctacta tatgagtcgg gacgggcagt cattgggtaa gaaaatcatg
     8221 agaatcaggg tgttgaaaac cgacggccgc aatcccggtt ttgtcggcac ggttttggta
     8281 cgcgaaatcg catggtcggt tttggttgcc attattgccg ccgttatcgg tcttgcagta
     8341 ggtgacaacg gagaaaacgc catcaacctg ctggcattcc ttgccaactt tgtcctgctc
     8401 tttatggtca aacgcgatcg ccgcacgctt tacgacatac tggcggatac ggttgtcgtc
     8461 aagctgccca aataaacgga cacggcaaaa tgccgtctga aagcctttca gacggcattt
     8521 ttatcttcag aaccgctcaa gcatcgtgca gtgaagccgc gtgcagggtg ttttccatca
     8581 atgtggcaat cgtcatcgga cccacgccgc cgggaacggg cgtaatcatc gccgcccgtt
     8641 cttttgccgt ttcaaattcc acgtcgccgc acaggctgcc gtcgtccaga cggttgatgc
     8701 ccacatcaat aacgaccgcg ccgggtttga tccattcgcc tttgacaaag ttcggaatgc
     8761 ctacgccgac caccaaaata tcggccccgg caacctcgtc tgccagattt tcggtcgcac
     8821 tgtggcagac cgttaccgtt gcgcgcgcca gcagcaattc caaagcctgc gggcggccga
     8881 caatattcga cgcgccgacc acgaccgctt ttttcccctt cggatcgatg ccgtaagcct
     8941 ccaaaagcgt catcacgccc ttgggcgtac acgggcgcat tagcggcatt ttgactgcaa
     9001 gcctgcccac attgtaagga tggaagccgt ccacgtcctt atccggcgaa atacgttcca
     9061 aaaccgcctg gctgtcgagg tgcttcggca gtggcagctg aaccagaata ccgtccactt
     9121 cggaatcgac attcaggcgg tcgaccagtg ccagcagttc ttcctgcgat gttgattcgg
     9181 gcagctcgta agacagtgat ttgatgccgc atttttggca ggaggttttc ttgttgcgga
     9241 cataaaccgc gctggcaggg tcgcctccga ccaaaaccac ggccaggcaa ggcgtgtgca
     9301 gattgttctg ttggcgttgc gccaccgctt cggcaaccgc ctgcaggcgt ttttgcgaaa
     9361 cttctttacc attgatcagt tgtgccgaca tatccgtcct tttgttaaac aggtagaaaa
     9421 tgctgaaaat tatcgcattt tccgtttgtt tttacagcag gatgccgaaa ataaatttgc
     9481 cctgaaataa aatacggctg tttggacgga ttaaatattt tttcaaatca aaaaactata
     9541 tttttcatct tggtgtcttg aaaataaatg ttgacgcatc tttccctgag ttgtatagtt
     9601 cgcttcttca agtcggggcg tagcgcagcc cggttagcgc atctgctttg ggagcagagg
     9661 gtcgtgagtt cgaatcccac cgccccgacc aatcaatcag cacgaatcgg catgagcgcc
     9721 cgtagctcaa ctggatagag caccgacctt ctaagtcggg ggttacaggt tcgattcctg
     9781 tcgggcgtgc caagaatttg attgaaaacc gtttttatgg tggctgtagc tcagttggta
     9841 gagccccgga ttgtgattcc ggttgtcgtg ggttcgagcc ccatcagcca ccccagataa
     9901 aggcccgtac ttttcggtac gggtcttttc ccgtttgcgc gtactgtccg cgccgccggc
     9961 tttgcctttc gcatatgctt ctgtatcatg tgggtttttc tgtcttttat ggtttttgtc
    10021 ggaggctttg atggttgacg cttggtctgt ccctgatttt gaatcgaaaa tctgtccgcc
    10081 cgaggcattg tccgaacggt tggctcggtt gccgcgcccg ctggtgttta ccaacggctg
    10141 tttcgacatc ctccacaggg ggcacgttac ttatctggcg caggcgcgtt cggcaggggc
    10201 ggcgttggtg ctggcgttga ataccgatgc ttcggtgcgg cgtttgggca aggacggcga
    10261 ccgcccgatt aatcctttgg agaaccgtgc cgccgttgcc gccgctttgg aaagtgtgga
    10321 tttggtaacg tggtttgacg gggatacgcc ggcggcgttg attgaggcgg tcaaacctga
    10381 gattttggtc aagggcggcg attgggctgc ggataagatt gtcggtgcgg cagaaacgtt
    10441 ggcgcgcggc ggtcaggtgt tttcaattcc gtttctgcac cagacttcga caacgaagac
    10501 tttggcaaaa atccgtgcgg cagagggcgg aaaatgacgg ttttgaagct ttcgcactgg
    10561 cgggtgttgg cggagcttgc cgacggtttg ccgcaacacg tctcgcaact ggcgcgtatg
    10621 gcggatatga agccgcagca gctcaacggt ttttggcagc agatgccggc gcacatacgc
    10681 gggctgttgc gccaacacga cggctattgg cggctggtgc gcccattggc ggttttcgat
    10741 gccgaaggtt tgcgcgagct gggggaaagg tcgggttttc agacggcatt gaagcacgag
    10801 tgcgcgtcca gcaacgacga gatactggaa ttggcgcgga ttgcgccgga caaggcgcac
    10861 aaaaccatat gtgtgaccca cctgcaaagt aagggcaggg ggcggcaggg gcggaagtgg
    10921 tcgcaccgtt tgggcgagtg tctgatgttc agttttggct gggtgtttga ccggccgcag
    10981 tatgagttgg gttcgctgtc gcctgttgcg gcagtggcgt gtcggcgcgc cttgtcgcgt
    11041 ttaggtttgg atgtgcagat taagtggccc aatgatttgg ttgtcggacg cgacaaattg
    11101 ggcggcattc tgattgaaac ggtcaggacg ggcggcaaaa cggttgccgt ggtcggtatc
    11161 ggcatcaatt ttgtcctgcc caaggaagta gaaaatgccg cttccgtgca atcgctgttt
    11221 cagacggcat cgcggcgggg caatgccgat gccgccgtgt tgctggaaac gctgttggcg
    11281 gaacttgatg cggtgttgtt gcaatatgcg cgggacggat ttgcgccttt tgtggcggaa
    11341 tatcaggctg ccaaccgcga ccacggcaag gcggtattgc tgttgcgcga cggcgaaacc
    11401 gtgttcgaag gcacggttaa aggcgtggac ggacaaggcg ttctgcactt ggaaacggca
    11461 gagggcaaac agacggtcgt cagcggcgaa atcagcctgc ggtccgacga caggccggtt
    11521 tccgtgccga agcggcggga ttcggaacgt tttctgctgt tggacggcgg caacagccgg
    11581 ctcaagtggg cgtgggtgga aaacggcacg ttcgcaaccg tcggtagcgc gccgtaccgc
    11641 gatttgtcgc ctttgggcgc ggagtgggcg gaaaaggtgg atggaaatgt ccgcatcgtc
    11701 ggttgcgccg tgtgcggaga attcaaaaag gcacaagtgc aggaacagct cgcccgaaaa
    11761 atcgagtggc tgccgtcttc cgcacaggct ttgggcatac gcaaccacta ccgccacccc
    11821 gaagaacacg gttccgaccg ctggttcaac gccttgggca gccgccgctt cagccgcaac
    11881 gcctgcgtcg tcgtcagttg cggcacggcg gtaacggttg acgcgctcac cgatgacgga
    11941 cattatctcg ggggaaccat catgcccggt ttccacctga tgaaagaatc gctcgccgtc
    12001 cgaaccgcca acctcaaccg gcacgccggt aagcgttatc ctttcccgac cacaacgggc
    12061 aatgccgtcg ccagcggcat gatggatgcg gtttgcggct cggttatgat gatgcacggg
    12121 cgtttgaaag aaaaaaccgg ggcgggcaag cctgtcgatg tcatcattac cggcggcggc
    12181 gcggcaaaag ttgccgaagc cctgccgcct gcatttttgg cggaaaatac cgtgcgcgtg
    12241 gcggacaacc tcgtcattca cgggctgctg aacctgattg ccgccgaagg cggggaatcg
    12301 gaacatactt aaaaaataca ccctttttca acacggggcg gtatccgtcc gaatccgtcc
    12361 ggattctgcc gcccgacaga ctgccgccca ggcgggcggg gtttcaaaca ttgaggaaat
    12421 tctaatgaaa tggctcttca cccttttggc ggtactcaat attgccgtat tcggcggcac
    12481 ggtgggctat aaattggccg ttaaagcgac gggcggcgtg ccggaaaacc gggccgtcga
    12541 aaacacgccc cccgcaacgc ccgccgccga caatgcggcg gcatccgtgg aggatacggc
    12601 ggcactgctc aaaccgggcg acatcctgac cgaagagcag gccgagcagt tgcgcttgaa
    12661 aaaggaagcg gaacagaaaa aactgaggga gaaaaaacag cgcgaggaaa aagcccgccg
    12721 cgaaaaactc gccgccgaaa aggcgcaggc ggaacgcgaa aacggcgcgg cggatgcctt
    12781 atgcgccgcg caggcaagcc tcacgatgga cgaagacgac taccaccgca tcaaagggct
    12841 tttgggcaaa tggtcgcacg ttgccagcag gagcgtcgaa aaacgcaccg ccaaagccaa
    12901 acctgccgac aaaacctacc gcgtcgtcct gcccgtttcc gccgatgccg aaaatcaggc
    12961 ggcggagctg tctgccaaag gtttcaaccc cataccgttt gacggcgcat tgagtttggg
    13021 tgtcggcaac agccgggaaa acgcccaagc cctgcaaaac cggcttgccg gcgccggatt
    13081 cggcggggcg catattgtcg aacactttgc cgaagccgac aggcaggacg attctttgag
    13141 cgtgtcgcgt atgacggttt tgtttaccgg cgtgaatgct gccgatgcgg acgaaattcg
    13201 taaaatcacg tccctatacg gcaaactgaa cctcaagtct tgcaaatagg cgcgaaagcc
    13261 ggacgataaa cgccaaaccc accgcgaagg tgggtttggc gtttcggttt tgagtatctg
    13321 atatataaaa agggaatgta tgtctcgtat atgccgactc caagtgtgaa agtgaattgt
    13381 gagggaatac agtgtttaat ggttcggaat ggacgacttc cgagtggttt tgattatacg
    13441 ctaataataa taattatcaa taaaaattta aaaataaatg cggatttttt gtaatacgat
    13501 gaaaaataaa caaattaacc tgtccgccga tgtttgtgat tcgggtcggc aaactttcat
    13561 tgtgtcggac aaatcggggt cggcagtcat agctgagggc ttcgtgcctg acggaaataa
    13621 gcctgccgtg tttgaacatc cgtccgattt ggcgcggaca gggttgtcat tcgggggtgt
    13681 ttgagcgtgg attcggggat gcaaaagcgg taaaaccgtt gcggatgaag gcttacggac
    13741 ggctttaggt atttttaagt gtattcaaac aacaacaaaa cgcttcttct attgccgtat
    13801 ttagggcttg cgcggcagcc tgcacaccgt ggaggccgag tgtttcgttg gttgcggcat
    13861 cgggacgggc ggcaaggttt tccggccggt ttttccattt tttccgacag agccgtgatg
    13921 cttgggaatg gcggtttgcc cgtttcagac cgccgccgtt ttgggctgcg atgccgtctg
    13981 aaccgttcag acggcatttt tgccgccttt ttcaatattc cgccgaatgc caaaacggtt
    14041 gtccgactgt cggcgtgctg gcttgcgctt tgtcgcgtgc ttcgaccggt ccggcttcaa
    14101 atgccagccg tccggattcg acggcgagtg cgaaggcgcg tgccatattg accggatcgc
    14161 cgctgcggga aacggcagta ttcaaaagca cgccgtcaaa gccccattcc atcacttgtg
    14221 ccgcctgtga gggcaaaccc aagcccgcgt cgataatcag cggcgtgtcg ggcaggcgtt
    14281 cgcgcaggac gttcaacgcg taggcgtgaa ccgcgcccaa acccgtgccg atcggggccg
    14341 cccacggcat caacgcctga cagcccgcgt cgagcaggcg gcggcaggca atcaggtctt
    14401 cggtgcaata aggcagcact ttgaagccgt ctttaatcag gatttccgcc gcttcgacaa
    14461 gctggaacac atccggctgc aaggtgtcgt catctccgat gagttccaat tttatccaat
    14521 cggtttcaaa cacttcgcgc gccatttgcg ccgtcgttac cgcttcctgc acgctttggc
    14581 agcctgccgt gttcggcagg acgggaacgc cggtttcttg aagcagcgac caaaacccct
    14641 gaccgtgcgc ctcgccgccg cttcccgcgc ggcgcagcga gacggtaatc atcgcaggct
    14701 gggcggtttg gatggattgt ttgaggattt cgggggtcgg gtaggcagcc gtgccgagca
    14761 gcagccgtga agggaaagtt tctccgtata gggtgagcat aatgggttcc tttgtatagt
    14821 ggattaacaa aaaccagtac ggcgttgcct cgccttagct caaagaaaac gattctctaa
    14881 ggtgctgaag cactaagtga atcggttccg tactatccgt actgtctgcg gcttcgtcgc
    14941 cttgtcctga tttaaagtta atccaccata acgttgtttt ggggacaggg gtcgtctgaa
    15001 aaggcaaaac cgcctagccg ccgacgacgg ggcggacgat atcgattttg tcgttttcgt
    15061 tcaaaaccgt ttccgcatac gcgcctttgg ggatgaaaac ggtgttgacc gccacggcaa
    15121 agggctgttg cggcgcggtt tgggcgatga ggtcggcaac gcttgtgccg tgaagttcgg
    15181 cgggtccgcc gtttaagatg atgttcatgg tttctcgatg tttct
//
LOCUS       DAWGKF010000038        14901 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.038, whole genome shotgun sequence.
ACCESSION   DAWGKF010000038 DAWGKF010000000
VERSION     DAWGKF010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14901)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14901)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14901
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.038"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(87..3572)
                     /gene="smc"
                     /locus_tag="WHR07_000817"
     CDS             complement(87..3572)
                     /gene="smc"
                     /locus_tag="WHR07_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HEZ2130054.1"
                     /translation="MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAV
                     RWVLGEASAKQLRGESMQDVIFNGAATRRPAPRASVELVFDNSDHSLQGAWGQYAEVS
                     IKRQLTRQGESTYFINNQTVRRRDITDLFLGTGVGARGYAVIEQGMISRIIEARPEEL
                     RAYIEEAAGVSKYKERRKETEGRLKDTREHLQRLGDLQNELARQVEKLEKQAETAERY
                     KSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETAAQVQVLNDEVRALQ
                     TAEQSQQQAVHELGNKRGVLREQIARLEEQIRHQQNLHQRIERDKQAAQAQLQRIHQE
                     QQQIRVQLEENELYVEEKQTELAEWAMQVAEHEERLPELEEAQTALNAAFQTQQDEAN
                     RIRRELALKQQQLAHAEQTVAKHEERKGRLKQENQALNLPDEAETAAAQEAAALLQSQ
                     QEHYEEQIIAAEEALHAAREAFQTASNRFQSLKQQHITLQAQQQALSQILSQQQEAAD
                     FWQASDHAAAPQLWQHITAPAEWQHALSVILAERLHARAVPQGFVPPEPLPQGQAAWL
                     SDDLSGGIKKSLPVQALLNQIQAQPPFQTALHYWLDGVLCAPDLSYALAHQNDLGAHQ
                     IWLTPEGHQVDKVSVLLYAKPAQESLIAQKARLDGIASELENLAPELSAAEAAFKQAE
                     AAVRSSEVQHKNLMQQQQQHTRQYSQAQQRAAELLARTNQGQIRREHIERELAQLAEE
                     QTVLQHTSDGLSDDIVTLQEAAAELEHQQQTTAHSRQEQQGRLKQAQLALLEANRQYG
                     LAEVAVHKLNQQKQNYRQQIAQLEQQTLDWQERQQELVLAYETEFQNDEQHIKLDELT
                     ESVHTLDEEYIAVQEKLTQIQEQGREQYARVQTLQTQLPQLQAATQTALLQQQEALIN
                     AKRYHQNLTERAADLDALEALAKESPKVLNSSIGSLSQQIEALGAVNLAALQELEEAR
                     ERDGYYRSQSEDVQAAITILEEAIAQIDDKTKARFKETFDAVNGKVQTFFPTLFGGGE
                     ATLKMIGDDLLTAGVSIMARPPGKKNSTIHLLSGGEKALTAMSLVFALFSLNPAPFCL
                     LDEVDAPLDDANTSRFCNLVKEMSAQTQFLYISHNRLTMEMAEQLVGVTMQEKGVSRV
                     VAVDIKQALEMAEAV"
     gene            3574..3825
                     /locus_tag="WHR07_000818"
     CDS             3574..3825
                     /locus_tag="WHR07_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009345706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130055.1"
                     /translation="MVGKNKKEAYFNGNPAAPPHILPAKPYRIPHPRCRLKPSDGIFN
                     APEPRFRQRPMLGAAFAVLPRRRARYNPPRHPPDLETCL"
     gene            3822..4556
                     /gene="lpxH"
                     /locus_tag="WHR07_000819"
     CDS             3822..4556
                     /gene="lpxH"
                     /locus_tag="WHR07_000819"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HEZ2130056.1"
                     /translation="MKPAYFISDLHLSEKHPELTALLLRFLRSSAAGQARAVYILGDL
                     FDFWVGDDEVSELNTSVAREIRKLSDKGVAVFFVRGNRDFLIGRDFCRQAGMTLLPDY
                     SVLDLFGCKTLICHGDTLCTDDRAYLRFRRIVHCRRLQKLFLMLPLKWRTRLAAKIRR
                     VSKMEKQVKPADIMDVNAAFTARQVRAFGAERLIHGHTHREHIHHENGFTRIVLGDWH
                     NDYASILRVDGDGAVFVPLENAENAV"
     gene            4811..6397
                     /locus_tag="WHR07_000820"
     CDS             4811..6397
                     /locus_tag="WHR07_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HEZ2130057.1"
                     /translation="MALFLSIFPIVLLIWLMVKKNSMPSYVALPITAVLIYAIKLFYF
                     DDAGMLLNATAASGLVKTLTPITVIFGAIMFNRMMETTGCIDVIRKWLATISPNPVAQ
                     LMIIGWAFAFMIEGASGFGTPAAIAAPILMSLGFNPLKVAIFTLVMNSVPVSFGAVGT
                     PTWFGFAPLNLSAEDILAIGRQTGVMHFFAGFVIPVIGLGFIVPWSEIRKNLGFVAIA
                     VFSCTIPYVALAMVNEEFPSLVAGAIGLMVSVFAANQGWGLSKDHAKDPNAEKVPFAQ
                     VAKALAPLGMLIGMLVVTRIKQLGIKGILTSKEEWFSFQLPFDLSKITVSDSLTITFG
                     NIFGQDVSASYQTLYVPAWIPFVLTVWICILLYKTKFKDAWTIYSVTFNQTKKPLLAL
                     MGALIMVQLMLVGGDNSMVKIIGKEFAAMAGEHWVYFSPYLGAIGAFFSGSNTVSNLT
                     FGPIQQQIALDTGLSVTLILALQSVGGAMGNMVCLNNIIAVCTVLDVKNSEGAIIKKT
                     VIPMAIYGVIAVVAAMIFFL"
     gene            complement(6565..6768)
                     /locus_tag="WHR07_000821"
     CDS             complement(6565..6768)
                     /locus_tag="WHR07_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HEZ2130058.1"
                     /translation="MDNLNLQEISVLPENLPLYCSGPDNEQWNGHPRVFLPLCEGESG
                     SVACPYCGTRYRLDGKMPHHHYA"
     gene            6884..7381
                     /locus_tag="WHR07_000822"
     CDS             6884..7381
                     /locus_tag="WHR07_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-mimic protein DMP19"
                     /protein_id="HEZ2130059.1"
                     /translation="MTALTLPEDIRQQEPSALLYPLVSAYLEHTAQTGDESLSCLSDD
                     QHTLTAFCYLDSQVEEGGFVQLIASGYGEYIFRNPLADSLRRWKIKAVPKVLDKAKAL
                     YEQHGKTIETLADGGADIESLRKQFPDFEEWDGAYYEAAEQDLPLLAEHIQSNWETFA
                     HIGQA"
     gene            7463..8656
                     /locus_tag="WHR07_000823"
     CDS             7463..8656
                     /locus_tag="WHR07_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HEZ2130060.1"
                     /translation="MFFKHIEAAPADPILGLGEAFKAETRPEKVNLGIGVYKDASGAT
                     PLVKAVKEAEKRLLESETTKNYLTIDGVADYNAQTQILLFGKDHEIIASRRAKTAQSL
                     GGTGALRIAAEFAKRQLNAQTIWISNPTWPNHNAIAKAVGIQDKPYRYYDAAKHGLDW
                     DGMIEDLSQAQKGDIVLLHGCCHNPTGIDPTPEQWETLAKLSAEKGWLPLFDFAYQGF
                     GNGLEEDAYGLRVFLKHNTELLIASSYSKNFGMYNERVGAFTLVAEDEATAARAHSQV
                     KTIIRTLYSNPASHGANTIALVLKNDDLKAQWIAELDEMRGRIKAMRQKFVELLKAKG
                     ASQDFDFIIEQNGMFSFSGLTPEQVDRLKNEFAIYAVRSGRINVAGITDDNIDYLCES
                     IVKVL"
     gene            complement(9059..9994)
                     /gene="hemC"
                     /locus_tag="WHR07_000824"
     CDS             complement(9059..9994)
                     /gene="hemC"
                     /locus_tag="WHR07_000824"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HEZ2130061.1"
                     /translation="MNPKKLVIASRESLLAMWQAKHIQGRLKALYPDCEVEILGMTTR
                     GDQILDKTLSKVGGKGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERA
                     NPFDAFVSNRYARLEEMSKGAVVGTSSLRREAQLRASYPHLVIKPLRGNVQTRLSKLD
                     NGEYDAIILAAAGLQRLELDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKP
                     LNHGVTNACVTAERALARALGGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADA
                     QAPAEYADALGRAVAKKLADDGARELIGAVLNTEN"
     gene            10113..10628
                     /gene="ybeY"
                     /locus_tag="WHR07_000825"
     CDS             10113..10628
                     /gene="ybeY"
                     /locus_tag="WHR07_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEZ2130062.1"
                     /translation="MKRTKKYPFLTLQRQRFHLNFENASSAAGIPAERDFYRWAWSAL
                     KNEYRRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDL
                     IICPQVVLKEAAEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAEIMEAEEIRLMLAA
                     GFPNPYQEDGH"
     gene            10630..11454
                     /locus_tag="WHR07_000826"
     CDS             10630..11454
                     /locus_tag="WHR07_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEZ2130063.1"
                     /translation="MDGAQPKTNFFERLIARLAREPDSAEDVLTLLRQAHEQEVFDAD
                     TLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKD
                     EVLGILHAKDLLKYMFNPEQFHLKSILRPAVFVPEGKSLTALLKEFREQRNHMAIVID
                     EYGGTSGLVTFEDIIEQIVGDIEDEFDEDDSADNIHAVSSERWRIHAATEIEDINTFF
                     GTEYSSEEADTIGGLVIQELGHLPVRGEKVIIGSLQFTVARADNRRLHTLMATRVK"
     gene            complement(11584..12963)
                     /gene="nhaC"
                     /locus_tag="WHR07_000827"
     CDS             complement(11584..12963)
                     /gene="nhaC"
                     /locus_tag="WHR07_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HEZ2130064.1"
                     /translation="MFAFKSLLDMPRGEALAVVVALIAAMGYTIISLEWLPHMSIIAA
                     IVVLILYGLVRGLKYNDMQQGMIGALNQGMGAIYLFFFIGLMVSALMMSGAIPTLMYY
                     GFGLISPTYFYFSAFALCSVIGVSIGSSLTTCATVGVAFMGMAAAFQADMAMTAGAIV
                     SGAFFGDKMSPLSDTTGISASIVGIDLFEHIKNMMYTTIPAWLISAALMLWLLPSVAA
                     QDLNSVESFRSQLEATGLVHGYSLIPFALLVVLALMRVNAVVAMLFTVMVAVAVTYLH
                     STPDLRQLGAWFYGGYKLEGEAFKDIAKLISRGGLESMFFTQTIVILGMSLGGLLFAL
                     GAIPSLLDAVRSFLTNAGRATFSVAMTSVGVNFLIGEQYLSILLSGETFKPVYDKLGL
                     HSRNLSRTLEDAGTVINPLVPWSVCGVFISHALGVPVWEYLPYAFFCYLSLALTLLFG
                     WTGLTLSKK"
     gene            complement(13254..14477)
                     /locus_tag="WHR07_000828"
     CDS             complement(13254..14477)
                     /locus_tag="WHR07_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar MFS transporter"
                     /protein_id="HEZ2130065.1"
                     /translation="MSAQSQNNHTSPLVVLTTLFFMMGFITCMNDILIPHLKEIFDLS
                     YVQAMLIQFCFFTAYAVMSIPMGAFVGKVGYKNGVIGGFLLTAVGCLLFYPAAGSHSY
                     AVFLGALFILASGVTLLQVAGNPYVTLLAKPGKESATLTLVQAFNALGTTIAPQIGAF
                     LILADATQTVSKAEQISSVQIPYLGLAGLLIILAVFVKMIRLPDARKIAAEESAHNHD
                     GKTSVWQYKHLVFGTAGIFCYVGAEVSIGSLMVNVLGYLKGLDHASAAHYLSFYWGGA
                     MVGRFLGSAVMAKFAPNRYLAFNASAAVVLLAVAMATGSGNADVAMWSLLAIGFFNSI
                     MFPTIFSLATKGLGKFTNAASGVLCTAIVGGAVVPVVQGWVADTYTLMSSFVVSVICY
                     LYIVFFAVYGYRADK"
BASE COUNT         3529 a         4207 c         3829 g         3336 t
ORIGIN      
        1 tttaaattta attcactata ccgtctgaaa acctgtatcg caacacgtca ttaaaaacgg
       61 caagattcag ccgttctgca acccgttcaa acggcttccg ccatttccaa cgcctgcttg
      121 atgtccacgg cgacgacgcg cgatacgcct ttttcctgca tggttacgcc gaccagctgc
      181 tctgccattt ccatggtcag gcggttgtgg gagatgtaga ggaactgggt ttgcgccgac
      241 atttctttga ccaggttgca gaaacgcgag gtgttggcgt cgtccagcgg ggcatcgacc
      301 tcgtccaaaa ggcagaacgg agcggggttg aggctgaaca gagcgaacac gaggctcatg
      361 gcggtgaggg ctttttcgcc gccggagagg aggtggatgg tgctgttttt cttgccgggc
      421 ggacgcgcca taatggacac accggcggtc agtaggtcgt cgcctatcat tttgagagtg
      481 gcttcgccgc cgccgaacag ggtcgggaag aaggtttgga ctttgccgtt gacggcgtcg
      541 aaggtttctt tgaaacgcgc tttggttttg tcgtcgattt gggcgatggc ttcttccaaa
      601 atggtgatgg cggcctgcac gtcttcgctt tggctgcggt agtagccgtc gcgttcgcgc
      661 gcttcttcga gttcttgcag ggcggcgagg ttgaccgcgc cgagggcttc gatttgttgc
      721 gagaggctgc cgatgctgct gttcaatact ttcggcgatt ctttcgccaa cgcttcgagc
      781 gcatccaaat cggcggcgcg ttcggtcagg ttttgatggt agcgtttggc gttgatcagg
      841 gcttcctgtt gttgcaacag ggcggtttgg gtggcggcct gaagctgtgg caactgggtt
      901 tgcagggttt gtacgcgggc gtattgttcc ctaccctgct cctgaatctg cgtgagtttt
      961 tcctgcacgg cgatgtattc ttcgtccagc gtgtgtacgg attcggtcag ctcgtcgagc
     1021 ttgatgtgct gctcgtcgtt ttggaactcg gtttcatagg cgaggacaag ctcttgctgg
     1081 cgttcctgcc agtcgagggt ttgctgttca agctgggcga tttgctgccg gtagttttgt
     1141 ttttgctggt tgagtttgtg gacggcgact tcggcaagcc catattggcg gttggcttcc
     1201 aacagggcaa gctgcgcctg tttcagacgg ccttgctgct cttggcggct gtgcgcggtg
     1261 gtttgctgct ggtgttcgag ttcggcggcg gcttcctgca aggtaacgat gtcgtctgaa
     1321 agcccgtcgg acgtgtgttg caacacggtc tgttcttccg ccaactgcgc cagttcgcgc
     1381 tcgatgtgtt cgcggcggat ttgcccttgg ttggtacgcg ctaagagttc ggcggcgcgt
     1441 tgctgcgcct gactgtattg gcgcgtgtgc tgctgttgct gctgcatcag gtttttatgt
     1501 tgcacttcag acgagcgcac ggcagcttcc gcctgtttga acgcggcttc ggcggcggaa
     1561 agttcggggg cgaggttttc cagttcggac gcgatgccgt cgaggcgcgc tttttgggca
     1621 atcaggcttt cctgcgcggg tttggcatag agcaggacgc tgactttatc gacctgatga
     1681 ccttcgggcg tgagccagat ttggtgtgcg cccaaatcgt tttgatgcgc gagggcatag
     1741 ctcaaatcgg gcgcgcacaa tacgccgtcg agccagtagt gcaatgccgt ctgaaacggc
     1801 ggctgcgctt ggatttggtt cagcaatgcc tgtacgggca gggatttttt gatgccgcct
     1861 gagaggtcgt ctgaaagcca tgccgcctgc ccctgcggca aaggctcggg cggcacgaaa
     1921 ccttgcggca cggcgcgggc gtgcaggcgt tcggcaagga tgacggacaa ggcgtgctgc
     1981 cactcggcgg gcgcggtgat gtgttgccac agttgcggcg cggcggcgtg gtcgcttgcc
     2041 tgccagaagt cggcggcttc ctgctgttgc gacaggattt gcgacaacgc ctgctgctgc
     2101 gcctgcaagg tgatgtgttg ctgcttcagg ctttggaagc ggtttgaggc cgtctgaaac
     2161 gcttcacgtg cggcatgcaa ggcttcttcg gcggcgatga tttgttcttc gtaatgctct
     2221 tgctggcttt gcaacaaggc ggcggcttcc tgcgcggcgg cggtttcggc ttcgtcgggc
     2281 aggttcaggg cttggttttc ctgtttcaga cgacctttgc gctcttcgtg cttggcaacg
     2341 gtttgttcgg catgggcaag ctgctgctgc ttcaacgcca gttcgcggcg gatgcggttt
     2401 gcctcgtcct gctgggtttg gaaggcggcg ttgagcgcgg tttgggcttc ttccaattcg
     2461 ggcagacgct cttcgtgttc ggcaacctgc atcgcccact ccgccagctc ggtttgcttt
     2521 tcttcgacgt ataactcgtt ttcttccagc tgcacgcgga tttgctgctg ctcttgatga
     2581 atacgctgca actgcgcctg cgccgcctgc ttgtcgcgtt cgatgcgttg atgcaggttt
     2641 tgctgatggc ggatttgttc ttccaaacgg gcaatctgct cgcgcaacac gccgcgtttg
     2701 ttgcccaatt cgtgtaccgc ctgctgctgc gactgttcgg cggtctgcaa ggcgcgtact
     2761 tcgtcgttta acacctgaac ctgcgcggcg gtttcgtcct gctgcgcctg caaagactga
     2821 tgctgcgcgg tcgccttgtc ggcggcggca agcgattgct gccattgggc gtaatcgagc
     2881 aaatcctgct gttggttcaa ctgcgcggtc agggatttgt agcgttcggc ggtttccgcc
     2941 tgtttttcca gcttttccac ctgacgcgcc aactcgttct gcaaatcacc caaacgctgc
     3001 aaatgctcgc gcgtgtcttt cagacggcct tccgtctcct tgcggcgttc cttatatttg
     3061 gacacgcccg ccgcctcctc gatataggcg cgcaactcct ccggccgcgc ttcgatgatg
     3121 cgcgaaatca tcccctgctc gataacggca taaccgcgcg cgcccacgcc cgtacccaga
     3181 aacaaatcgg taatgtcgcg gcggcgcacg gtctgattgt tgatgaaata agtcgattcg
     3241 ccctgacgcg tcagctgccg cttgatgctc acctcggcat actgccccca cgccccctgc
     3301 aaactgtggt cgctgttgtc aaataccagc tccaccgaag ccctcggcgc aggacggcgc
     3361 gtcgccgcac cgttaaaaat cacgtcctgc atactctcgc cgcgaagctg cttcgccgaa
     3421 gcctcaccca acacccagcg caccgcgtca atcacattcg acttgccgca accgttcggc
     3481 ccgataaccg cgacaagctg ccccggcaca tgaatcgtgg tcgggtcggt aaaagatttg
     3541 aagccggaga gtttgatatg ggtcaggcgc ataatggtcg gaaaaaataa aaaagaagcg
     3601 tattttaacg gaaatcccgc cgcaccaccc catatcttgc cggcaaaacc ttaccgcatc
     3661 ccgcaccctc gatgccgtct gaagccttca gacggcattt ttaacgcgcc cgaaccccga
     3721 ttccgccaac gcccgatgct tggcgcggca tttgccgtat tgccccgccg ccgggcgcgt
     3781 tataatccgc cacgacatcc gcccgatttg gaaacctgcc tatgaaaccc gcctatttca
     3841 tctccgacct gcatttgagc gaaaagcacc ccgaactgac cgcgctgttg ctgcgttttt
     3901 tacgttcttc cgccgccggg caggcgcggg cggtttatat tttgggcgat ttgtttgatt
     3961 tttgggtggg cgatgacgaa gtttccgaat tgaatacttc ggttgcgcgt gaaatcagga
     4021 aattgtccga caaaggcgtt gccgtgttct tcgtcagggg caaccgcgat ttcctgattg
     4081 ggcgggattt ttgccgacag gcgggtatga cgctgctgcc ggattactcg gttttggact
     4141 tgttcggctg caaaaccctc atctgccacg gcgacactct gtgtacggat gacagggcat
     4201 acctgcgttt ccgccgcatc gtgcattgca ggcggctgca aaaactgttc ctaatgctgc
     4261 ccctgaagtg gcgcacgcgc cttgccgcca aaatcaggcg tgtcagcaaa atggaaaaac
     4321 aggtcaagcc cgccgatatt atggatgtca atgccgcctt taccgcgcgg caggtacgcg
     4381 ccttcggtgc ggaaaggctg atacacggac acacccaccg cgagcatatc catcacgaaa
     4441 acggctttac ccgcatcgtt ttgggcgact ggcataacga ctatgcttca atcctccgcg
     4501 tggacgggga cggcgcggta ttcgtgccgc tggaaaatgc tgaaaatgcc gtctgaagcc
     4561 tttcgggcgg cttttttaca cgcccctttc ccacactccc tccgccgcat catcaccatc
     4621 cttaacccgc attaatagcc attatcgata aaatgcttga ccgattacat aagattacgt
     4681 aaagtgtgca aacgcataac aattggtctt accaatttat cttttaacca aaatatcggg
     4741 tgtacgggat ttgaacgtct ttccaaacct cgacgcgcct tatgatgcaa atgcctaaaa
     4801 aggattcgtt atggcacttt tcctcagcat attccccatc gtcctgctga tttggctgat
     4861 ggtgaaaaaa aacagtatgc cctcctacgt cgcgctgccg attaccgcag tgctgattta
     4921 cgccatcaaa cttttctact tcgacgatgc gggcatgctg ctcaacgcca ccgccgcttc
     4981 cggcctcgtc aaaacgctca cgccgattac cgtgattttc ggcgcgatta tgttcaaccg
     5041 tatgatggaa accacgggct gcatcgatgt catccgcaaa tggctggcga ccatcagccc
     5101 caaccccgta gcgcaactga tgattatcgg ctgggctttt gcctttatga ttgaaggcgc
     5161 atccggcttc ggcacgcctg ccgcgattgc cgcgccgatt ctgatgagct tgggcttcaa
     5221 cccgttgaaa gtggcgattt tcactttggt gatgaactcc gtccccgtct ctttcggcgc
     5281 ggtcggtacg ccgacctggt tcggtttcgc accgctgaac ctgagtgccg aagacatcct
     5341 cgccatcggc aggcagaccg gcgtaatgca cttcttcgca ggtttcgtca tccccgtcat
     5401 cggcttgggc ttcatcgtac cttggtctga aatccgcaaa aacttgggct tcgtcgccat
     5461 tgccgtcttc tcctgcacca ttccttatgt cgcattggcg atggtcaacg aagaattccc
     5521 gtcgctcgtc gccggcgcga tcggcctgat ggtgtccgta ttcgccgcca accaaggctg
     5581 gggcttgagc aaagaccacg ccaaagaccc gaatgccgaa aaagtgccgt tcgcccaagt
     5641 cgccaaagca ctcgcccctt tgggtatgct gatcggcatg ctggtggtta cgcgcatcaa
     5701 acagctcggc atcaaaggca ttttgaccag caaagaagaa tggttcagct tccaactgcc
     5761 gtttgatttg tccaaaatca ccgtcagcga ctccctgacg attaccttcg gcaatatttt
     5821 cggacaagat gtcagcgcgt cttaccaaac gctgtacgtc ccggcttgga ttccgtttgt
     5881 gctgaccgtt tggatttgca tcctgctgta taaaaccaaa ttcaaagatg cctggacgat
     5941 ttattccgta actttcaatc aaaccaaaaa accgctgctt gccctgatgg gcgcgctgat
     6001 tatggttcag ctgatgctgg tcggcggcga caattcgatg gtgaaaatca tcggtaagga
     6061 atttgccgca atggcgggcg aacactgggt ttatttctcg ccgtatctgg gcgcgatcgg
     6121 cgcgttcttc tccggctcca acaccgtgtc caacctgact ttcggcccga ttcagcagca
     6181 aatcgccttg gataccggcc tgtccgttac cctgattctg gcgttgcagt ccgtcggcgg
     6241 cgcgatgggc aatatggtgt gcctcaacaa catcatcgcc gtatgtaccg tattggatgt
     6301 gaaaaattcc gaaggtgcga ttatcaagaa aaccgttatc ccgatggcga tttacggcgt
     6361 gattgccgtc gtcgcggcaa tgattttctt cctctaggcg aaacgccacc atccatagcg
     6421 gcagcacgcg gggaacggaa accgccgttc cccgtctggg cggcgcgtcg ggcagaatcc
     6481 cggtgccgga acagcccgcc ccgccaaaca aatgccgtct gaaaccggaa aaggcttcag
     6541 acggcatttt tccgccgttt gcattcaggc gtaatgatga tgcggcatct tgccgtcaag
     6601 gcggtagcgc gtgccgcaat acgggcaggc aacgctgccc gattctcctt cgcacaaagg
     6661 caaaaacact ctcggatgcc cgttccactg ctcgttgtcg ggtcccgagc aatacagcgg
     6721 cagattttcc ggcaacacgg aaatttcctg cagattcaga ttgtccattt gattttcctt
     6781 tgcgtggttg gcgtgcgccc attttacgcc atcggcaggc taaaggatat tttcggcgca
     6841 aagccgcaat ccgctataat ccccactttt cagacggcat accatgactg cgcttaccct
     6901 tccggaagac atccgccaac aagagccatc cgccctgctc tatcccctcg tttccgccta
     6961 cctcgaacac accgcccaaa ccggcgacga atccctctcc tgcctgtccg acgaccagca
     7021 cacgctgacc gcattctgct acctcgacag ccaagtcgaa gaaggcggct tcgtgcaact
     7081 catcgcctcc ggttacggcg aatatatttt ccgcaacccg cttgccgaca gcctgcgccg
     7141 ctggaaaatc aaagccgtgc cgaaagtctt ggacaaagcc aaagccctct acgaacaaca
     7201 cggcaaaacc atcgaaacgc tcgccgacgg aggcgcagac atcgaatccc tgcgcaaaca
     7261 gttccccgac tttgaagaat gggacggcgc atactacgaa gccgccgaac aagacctgcc
     7321 cctgcttgca gaacacatac agtcaaactg ggaaaccttc gcccatatcg ggcaggcgtg
     7381 attgcgtctg tttccagccc gtgtaaaaca gcgtaaaatc ggcaaacccg aatgaccttc
     7441 cgtccccatc aaggagcaag ctatgttctt caagcacatc gaagccgccc ccgccgatcc
     7501 gattctcggt ttgggcgaag cattcaaagc cgaaacccgc cccgaaaaag tcaacctcgg
     7561 catcggcgtt tataaagacg catccggcgc gacacccctc gtcaaagccg tcaaagaagc
     7621 cgaaaaacgc ctgttggaaa gcgaaaccac caaaaactac ctcaccatcg acggcgttgc
     7681 cgactacaac gcgcaaaccc aaatcctgct gttcggcaaa gaccacgaaa tcatcgccag
     7741 ccgtcgcgcc aaaacagcgc aaagcctcgg cggtacgggc gcattgcgta ttgcggccga
     7801 gtttgccaaa cgccagttga acgcgcaaac catctggatt tccaatccga cttggcccaa
     7861 ccacaacgcc atcgccaaag cggtcggtat ccaagacaaa ccttatcgtt actatgatgc
     7921 cgccaaacac ggtttggatt gggacggcat gattgaggac ttgagccaag cgcaaaaagg
     7981 cgacatcgtc ctgctgcacg gctgctgcca caatcctacc ggcatcgacc ctacgcccga
     8041 acaatgggaa actttggcaa aactttctgc cgaaaaaggc tggttgccgc tgtttgactt
     8101 tgcctaccaa ggcttcggca acggtctgga agaagatgcc tacggcttgc gcgtgttctt
     8161 gaaacacaat acagaattgc tgattgccag ctcttattcc aaaaacttcg gtatgtacaa
     8221 cgagcgcgtg ggcgcgttca ctttggtggc cgaagatgaa gcaaccgccg cccgcgccca
     8281 cagccaagtc aaaaccatca tccgtacctt gtattccaat ccggcttcac acggcgcgaa
     8341 cactattgcg ctggtgttga aaaatgatga tttgaaagca caatggattg ccgaactcga
     8401 tgaaatgcgc ggccgcatca aagccatgcg ccaaaaattt gtcgagttgc tcaaagccaa
     8461 aggtgcaagc caagactttg atttcattat cgaacaaaac ggtatgttct ctttcagcgg
     8521 tctgactccc gaacaagttg accgtttgaa aaacgagttt gccatttatg ccgtccgctc
     8581 cggccgcatc aacgttgccg gcattaccga cgacaacatc gattatctgt gcgaaagcat
     8641 cgtgaaagta ctgtaaaaag cacagccata tgaaaatgcc gtctgaacct taaccagttc
     8701 agacggcatc tgttttttgt taaaaaacaa taaactataa caatttcaaa caagctaaaa
     8761 acatctataa aatcaaccca atatgatgaa ctcaaataaa aatacgaata tcatcattct
     8821 caaattcaaa atttgaacgc cacagtatta tccgaagcca caaaaacctt tccgccgtca
     8881 ttcccgcgca ggcgggaatc cgggaaacca atgctgcaag aattgattag aaacaactga
     8941 aaccgagcaa actggattcc cacctgcgcg ggaatgacga aataaggcga gtaaaactga
     9001 tgaaacaaat tgattaaaaa caataactta tattatttta tttaaatttt cgataaaatc
     9061 aattttccgt attcaatact gctccaatca attcccgcgc accgtcgtcc gccaatttct
     9121 tagcgacagc gcgtccgagc gcgtcggcat attcggcagg ggcttgcgcg tccgcccgca
     9181 acacaaccga accgtcggga tgaccgacca agccgcgcaa ggtcagcaag ccgttttctt
     9241 ccgtgcaata tgcggccagc ggcacttggc agcttccgcc caaagcgcgt gcgagggcgc
     9301 gctcggcggt aacgcaggca ttggtaacgc cgtggttcaa gggtttcaaa acttcataca
     9361 aatcttcgcg gtgcgcggca atttcgatac ccaacgcgcc ttgtccggcg gcaggcaggc
     9421 tgtcggattc cgacaaaatc atacggatgc gtccgtccaa ttctaaacgc tgcaaaccgg
     9481 cggcggcaag gataatcgcg tcgtattcgc cattgtcgag tttggacaaa cgggtttgca
     9541 cattgccgcg caggggtttg atcaccaaat gcggatagct cgcacgcaac tgggcttcgc
     9601 ggcgcaggct ggatgtaccg acgacggcac ctttggacat ttcctccaaa cgcgcgtatc
     9661 ggttggacac aaacgcgtca aacggattgg cgcgttcgcc gatggccgca agcgcgaaac
     9721 cttcaggcaa atccatcggt acgtctttaa tcgaatgcac cgccaaatcg gcgcgcccgt
     9781 catataaagc ctgttccaac tctttgacaa acaagccttt accgccgact tttgacaaag
     9841 ttttgtccaa aatctggtcg ccgcgcgtgg tcatacccaa aatctcgact tcacaatcgg
     9901 gatacagggc tttcagacgg ccttggatat gctttgcctg ccacatggca agcaggcttt
     9961 cgcggctggc gatgacgagt tttttcgggt tcatgttcaa tgcgttcaaa gaatggaaac
    10021 ggcgtgaagt ctatcatatt ttgaacgttt cttcagacgg caccgtcagg tctatgttat
    10081 atttacaccc acaaaacacg aaacccgcca caatgaaacg caccaaaaaa taccctttct
    10141 taacgttgca gcggcaacgt ttccatttga actttgaaaa cgcctcttcc gccgccggca
    10201 tcccagccga acgcgatttc taccgctggg cgtggtctgc cttgaaaaat gaataccgcc
    10261 gcgccgacat cagcctgatt cttctggacg aagaagaagc ccgagcctac aaccgcgact
    10321 accgcggcaa agattacgcc accaatgtat tgagtttcgc gctcaacgaa ggcgaaatcc
    10381 tgccctgcca agtttcggaa aaactgtacg gcgatttgat tatctgcccg caagtggttt
    10441 tgaaagaagc cgccgaacaa ggcaaaacac ccgaacagca ttttgcccac ctgaccatac
    10501 acggtacttt acacctgatg ggctacgacc atatcgaaga cgatgaagcc gaaataatgg
    10561 aagccgaaga aatccgcctg atgctggcgg caggcttccc caacccctac caagaggacg
    10621 gacattaaaa tggacggcgc acaaccgaaa acaaattttt ttgaacgcct gattgcccga
    10681 ctcgcccgcg aacccgattc cgccgaagac gtattgaccc tgttgcgcca agcgcacgaa
    10741 caggaagtat ttgatgcgga tacgctttta agattggaaa aagtcctcga tttttctgat
    10801 ttggaagtgc gcgacgcgat gattacgcgc agccgtatga acgttttaaa agaaaacgac
    10861 agcatcgaac gcatcaccgc ctacgttatc gataccgccc attcgcgctt ccccgtcatc
    10921 ggtgaagaca aagacgaagt tttgggtatt ttgcacgcca aagacctgct caaatatatg
    10981 ttcaaccccg agcagttcca cctcaaatcg atattgcgcc ctgccgtctt cgtccccgaa
    11041 ggcaaatcgc tgaccgccct tttaaaagag ttccgcgaac agcgcaacca tatggcgatc
    11101 gtcatcgacg aatacggcgg cacgtcgggt ttggtaactt ttgaagacat catcgagcaa
    11161 atcgtcggcg acatcgaaga cgagtttgac gaagacgaca gcgcggacaa catccacgcc
    11221 gtttcttccg aacgctggcg catccacgcg gctaccgaaa tcgaagacat caacaccttc
    11281 ttcggtacgg aatacagcag cgaagaagcc gacaccatcg gcggcctggt cattcaagag
    11341 ttagggcatc tgcccgtacg cggcgaaaaa gtcatcatcg gcagtctgca atttaccgtc
    11401 gcacgcgccg acaaccgccg cctgcatacg ctgatggcga cccgcgtgaa gtaagcaccg
    11461 ccgtttctgc acagtttagg atgacggtac gggcgttttc tgtttcaatc cgccccatcc
    11521 gccaaacata aaaatgccgt ctgaagccgg aaaacaggtt cagacggcat tttgcttatc
    11581 cgcttatttt ttgctcaaag tcagccccgt ccagccgaat aacagggtca aagccaaact
    11641 caaatagcag aaaaaggcat agggcagata ttcccagacc ggcacaccca gcgcatggct
    11701 gataaatacg ccgcacacgc tccacggaac aagcgggttg atgaccgtcc ccgcatcttc
    11761 gagcgtccga gacaggttgc gcgaatgcag accgagctta tcgtaaacgg gtttgaacgt
    11821 ttcacccgac aacaaaatac tcaaatattg ctcgccaatc aggaaattaa ccccgaccga
    11881 agtcatagca acgctgaatg tggcacgccc ggcattcgtc aaaaagctgc ggacggcatc
    11941 cagcagggaa ggaatcgcgc ccagtgcaaa caacagcccg cccaaactca tcccgaggat
    12001 aacgatagtc tgcgtgaaga acatactttc caaaccgccg cgcgaaatga gtttggcaat
    12061 gtctttaaac gcttcgcctt cgagtttgta gccgccgtaa aaccacgcgc cgagctgacg
    12121 cagatcgggc gtactgtgca gatacgttac ggcaacggca accatgacgg taaagagcat
    12181 ggcgaccacg gcattgacgc gcatcaatgc caaaacgacc aacagtgcaa acggaatcag
    12241 cgaatagccg tgcaccaatc ccgtggcttc aagctggctg cggaaggatt cgacgctgtt
    12301 caaatcctgc gcggcgacac tgggaagaag ccacagcatc agtgccgcac tgatgagcca
    12361 cgcgggaatg gtggtgtaca tcatattttt gatgtgctca aacaggtcga tgccgacgat
    12421 ggacgcggaa atgcccgtcg tatccgaaag cggggacatt ttgtcgccaa aaaatgcgcc
    12481 cgaaacaatc gcgcccgccg tcatcgccat atcggcctga aacgccgccg ccatccccat
    12541 aaaggcaacg ccgacagtgg cgcaggtggt caggctgctg ccgatggaca cgccgatgac
    12601 ggaacacagc gcgaaggcgg aaaaataaaa ataagtcgga gaaatcagcc cgaaaccgta
    12661 atacatcagc gtcggaatcg caccgctcat catcagtgcg ctgaccatca gcccgatgaa
    12721 gaaaaacagg taaatcgcgc ccataccctg attcaacgcg cctatcatgc cctgctgcat
    12781 atcgttgtat ttcaaaccgc gcaccaagcc gtacaaaatc agcacgacga tggcggcaat
    12841 aatggacata tgcggcagcc actccaatga aatgatggta tagcccatcg cggcaatcag
    12901 agcgacgacg acggcaagtg cctcaccgcg cggcatatcg agtaaggatt tgaaagcaaa
    12961 catgattctt tgcccgattt gatataaagt taacggattc taacacacca taccgaatcc
    13021 gcccaacgtt ttcagacggc attttagcgt tttacaaaag ccggacagaa acaaaacggc
    13081 aattttctca atttaaatta atttttttga aatataattt tttatttttt tgtttgttgg
    13141 catataagac ttttatggat tgaagtatta aaacctcggc acacacgccg caaacaccgg
    13201 tacgcaaaaa tgccgtctga aagatgttca gacgacattt ctcaagaaaa agattatttg
    13261 tccgccctat atccgtacac cgcaaaaaac acgatataca gataacagat gacggaaacg
    13321 acaaacgaag acatcagggt gtaagtatct gccacccagc cctgcacgac aggaacgacc
    13381 gcaccgccga caatcgcggt acacagtaca ccggaagccg cgttggtaaa ttttcccaat
    13441 cctttggttg ccaaagagaa aatcgtcggg aacataatcg agttgaaaaa accgatggca
    13501 agcagcgacc acatcgccac atccgcattg ccgctacccg tcgccatcgc gacggcaagc
    13561 agtacgaccg cagccgatgc gttaaacgcc aaataacggt tgggcgcgaa tttcgccatc
    13621 accgccgaac cgaggaaacg tccgaccatc gcgccgcccc aatagaacga caggtaatgc
    13681 gcggcagaag catgatccag ccctttcaga taacccaata cgttgaccat caacgaaccg
    13741 atagacacct ccgcgccgac atagcagaaa atgcctgccg taccgaacac gagatgtttg
    13801 tattgccata cgctggtttt gccgtcgtgg ttgtgcgcgc tttcctcggc ggcaattttg
    13861 cgcgcgtcgg gcagccggat cattttcacg aaaacggcaa ggataatcag cagccccgcc
    13921 agtcccaaat agggaatctg tacggaagaa atctgttccg ccttgctgac ggtttgggtt
    13981 gcgtccgcca aaatcaggaa cgcgccgatt tgcggcgcaa tggtcgtacc caaagcgtta
    14041 aacgcctgaa ccagcgtcag tgttgccgat tccttgccgg gtttcgccag cagggtaaca
    14101 taaggattac cggcaacctg aagcagcgtt acgccggaag ccaaaataaa caacgcgccc
    14161 aaaaataccg cgtaagaatg gctgcccgca gcaggataaa acagcaggca tccgaccgcc
    14221 gtcagcagaa agccgccgat aacgccgttt ttgtagccga ctttgccgac aaaagccccc
    14281 atcgggatgg acatcaccgc ataggcggta aagaaacaga attggatcag catcgcctga
    14341 acgtaagaca ggtcgaaaat ttctttcaaa tgagggataa ggatgtcgtt catgcaggta
    14401 ataaaaccca tcatgaagaa cagcgtggtc aagacgacca atggggacgt atgattgttt
    14461 tgtgattgcg cagacatgat ttgcctttcg tggtgtcgga atattacccg tttcaagaaa
    14521 atagaaattg acatttctta acggcaatgc aaatcatact gatatttgaa cattttgcaa
    14581 actttatcgg atgcaggcaa tgcgccgatc tgaaattcaa gcagcagaaa ttaatatttt
    14641 acagttgctt gcatagattt taatagattt taaaaaattc cggcggactt gcaaaaaccg
    14701 ttcccaataa aatgaaaatc cgccgccgta tccggaaaat tcggaaatgc cgcatcgtgg
    14761 catcaaaacc ggagcggaaa gaatgtcgta tgcccgacaa aaaaggggca tacggctgtg
    14821 ccgtattttt tgcaccgtcc tccgcccttc ggcgggggcg tgaaaatata gtggattaac
    14881 aaaaatcagg acaaggcgac g
//
LOCUS       DAWGKF010000039        14892 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.039, whole genome shotgun sequence.
ACCESSION   DAWGKF010000039 DAWGKF010000000
VERSION     DAWGKF010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14892)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14892)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14892
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.039"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(104..1891)
                     /gene="lpdA"
                     /locus_tag="WHR07_000829"
     CDS             complement(104..1891)
                     /gene="lpdA"
                     /locus_tag="WHR07_000829"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEZ2130066.1"
                     /translation="MSLVELKVPDIGGHENVDIIAVEVNVGDTIAVDDTLITLETDKA
                     TMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEAEGAAASPKAEAPVAAPAQEAPKAA
                     APAPQAAQFGGSADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNV
                     GCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDMLRAYKNGVVSRLTGGLAGMAK
                     GRKVDVIQGDGQFLDSHHLEVSLTAGDAYELAAPTGEKKIVAFKNCIIAAGSRVTKLP
                     FIPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ
                     GADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLV
                     AAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHE
                     GHVAAENCAGHKAYFDARVIPGVAYTSPEVAWVGETELSAKASGRKITKANFPWAASG
                     RAIANGCDNGFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIH
                     PHPTLGESIGMAAEVALGTCTDLPPQKKK"
     gene            complement(1968..3569)
                     /gene="aceF"
                     /locus_tag="WHR07_000830"
     CDS             complement(1968..3569)
                     /gene="aceF"
                     /locus_tag="WHR07_000830"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HEZ2130067.1"
                     /translation="MSIVEIKVPDIGGHENVDIIAVEVKAGDTIAVDDTLITLETDKA
                     TMDVPADAAGVVKEVKVKVGDKISEGGVILTVETGAAAAEAAPAAAEAQPAPAAAPVA
                     AGGATVQVAVPDIGGHTDVDVIAVEIKVGDTVAEDDTLITLETDKATMDVPCTAAGVV
                     KAVFLKVGDKVSEGSAIIEVETAGSAAAAPAPAAQAAAPAPAAAPVPAAAAAPAPSAP
                     AAAKIDEAAFAKAHAGPSARKLARELGVDLGQVKGTGLKGRIMGDDIKAFVKSVMQGG
                     AAKPAAASASLGGGLDLLPWPKVDFSKFGNVEVKELSRIKKISGQNLSRNWVVIPHVT
                     VHEEADMTELEEFRKQLNKEWEREGVKLSPLAFIIKASVSALKAFPEFNASLDGDNLV
                     LKNYFNIGFAADTPNGLVVPVIKDVDQKGLKQISQELTELSKKAREGKLKPQEMQGAC
                     FTISSLGGIGGTGFTPIVNAPEVAILGVCKSQIKPVWNGKEFAPRLMCPLSLSFDHRV
                     IDGAAGMRFTVFLAKLLKDFRRITL"
     gene            complement(3719..6382)
                     /gene="aceE"
                     /locus_tag="WHR07_000831"
     CDS             complement(3719..6382)
                     /gene="aceE"
                     /locus_tag="WHR07_000831"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HEZ2130068.1"
                     /translation="MSTQLHDVDPIETQEWLDALSSVLEYEGGERAQYLLENLVKYCR
                     DKGVRMPHGTTTPYLNTVSVENEKGIPGDQNIEHRIRAFVRWNAAAIVLRAGKKDLEL
                     GGHIASFQSAATMYEVGFNHFWKAKGEGEEGDLVFFQGHVAPGIYARAFVEGRLTEDQ
                     LNNFRQEVDGHGLPSYPHPHLLPDFWQFPTVSMGLGPIMAIYQARFLKYLESRGLAKT
                     KGRKVWCFCGDGEMDEPESQGAIALAAREGLDNLIFVINCNLQRLDGPVRGNGKIIQE
                     LEGNFAGAGWNVVKVIWGRRWDRLLAKDKDGILRQRMEECLDGDYQTYKSKDGAYVRE
                     HFFNTPELKALVADMTDEQLWALNRGGHDPQKVYNAYDRAANHADGKPTVILAKTIKG
                     YGMGASGEGQNVAHQAKKMDKASLKQFRDRFDIPVTDEQIESGDLPYLTFAPDTEEYK
                     YLHARRDALGGYLPQRKPTQEVLEVPELSAFDAQLKSSGEREFSTTMAFVRILSTLLK
                     DKKIGKRVVPIVPDESRTFGMEGMFRQYGIWNPKGQQYTPQDKDQLMFYKESVDGQIL
                     QEGINEPGAMADWIAAATSYANSNFAMIPFYIYYSMFGFQRIGDLAWAAGDMHARGFL
                     LGGTAGRTTLNGEGLQHEDGHSHIQADLIPNCVSYDPTFQYEVAVIVQDGLRRMYANN
                     EDVFYYITLMNENYTHPDMPEGAEQDILKGMYLLKAGGKGDKKVQLMGSGTILQEVIA
                     GAELLKADFGVEADIWSCPSFNLLHRDAVEVERFNRLHPLEAEKVPFVTSKLQGHDGP
                     VIAATDYIRSYADRIRAYIPNDYHVLGTDGFGRSDSRANLRRFFEVDRYNVAVAALSA
                     LAEQGKVSKETVQQAIEKYGIKADSAPSWKR"
     gene            7076..8788
                     /locus_tag="WHR07_000832"
     CDS             7076..8788
                     /locus_tag="WHR07_000832"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEZ2130069.1"
                     /translation="MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMP
                     MGLRVLRKVENVVREEMACAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDR
                     DFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDA
                     YSFHADYASLQTTYDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE
                     DVIAYSDTSDYAANIELAPTLPLKGERTAAQAELTKVHTPNVKTIESLVEFLNIPVEQ
                     TLKSIVVESENEGEIVLLLLRGDHEFNDIKAEKLAGVKSPLTMASSAAIVEQFGANGG
                     SLGPVGFKGKVYADFATEKGADWVIGANEDGYHYTGFNFGRDAAEPEFVDLRNVVEGD
                     ESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVV
                     AAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDAVREAADKIYAELLAAGADVLLD
                     DRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVTA
                     SLNG"
     gene            8851..9507
                     /locus_tag="WHR07_000833"
     CDS             8851..9507
                     /locus_tag="WHR07_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEZ2130070.1"
                     /translation="MASVFLEGEAVEVGNIFCIGRNYAAHIEELKNEIPSEPVVFMKP
                     SGSILNSGGTILLPEFSRDVQFECELVLLVGKDSDGMGEGEDILGCVAGYGVGLDLTA
                     RDIQCHLKAQGLPWLKAKGFRHSACVSDFAAADRIGNPEKVLFSLKQNGVLKQRGDTG
                     LMIYPIREILHKLAADYGLGKGDLVFTGTPSGVGAIGAGDNLALELDGLVRASFTVGC
                     "
     gene            complement(9517..9972)
                     /gene="ruvX"
                     /locus_tag="WHR07_000834"
     CDS             complement(9517..9972)
                     /gene="ruvX"
                     /locus_tag="WHR07_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEZ2130071.1"
                     /translation="MHKIPKGTALAFDFGEARIGVAQGDAELGLSHPLSTVTGGSNDE
                     KFAAIAKLVQEWQPRYFVVGLPVHTDGTKHEMTHLSRKFGRRLNGRFNLPVYWVDERL
                     SSVYAESLLSEAQVFGKKRKSVLDQVAAQAILHGFFEGGPAECFNGREG"
     gene            complement(9965..10513)
                     /locus_tag="WHR07_000835"
     CDS             complement(9965..10513)
                     /locus_tag="WHR07_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HEZ2130072.1"
                     /translation="MNLSNHFLVAMPDMEDAFFSQSVVYICKHDEDGALGIAINKPSP
                     ITMDMIFSATGKNIPMRMQHDSVMMGGPVQVERGYVVHTPIGNWQSSIGVSDNIALTS
                     SRDVIENISREGAVDKALISIGYSSWGKGQLERELADNAWLTVPADEHILFDIPYEHR
                     YAAAFAKLGIDPLALFSGAGHA"
     gene            complement(10515..11075)
                     /locus_tag="WHR07_000836"
     CDS             complement(10515..11075)
                     /locus_tag="WHR07_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CreA family protein"
                     /protein_id="HEZ2130073.1"
                     /translation="MNRLLLLSAAVLLTACGSGETDKIGRASTVFNILGKNDRIEVEG
                     FDDPDVQGVACYISYAKKGGLKEMVNLEEDASDASVSCVQTASSISFDETAVRKPKEV
                     FKHGASFAFKSRQIVRYYDPKRKTFAYLVYSDKIIQGSPKNSLSAVSCFGGGIPQTDG
                     VQADTSGNLLAGACMISNPIENPDKR"
     gene            11403..13193
                     /locus_tag="WHR07_000837"
     CDS             11403..13193
                     /locus_tag="WHR07_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEZ2130074.1"
                     /translation="MRYKPLLLALMLVFSTPAVAAHDAAHNRSAEVKKQTKNKKEQPE
                     AAEGKKEKGKNGAVKDKKTGGKEAAKEGKESKKTAKNRKEAEKEATSRQSARKGREGD
                     KKSKAEHKKAHGKPVSGSKEKNAKTQPENKQGKKEAKGQGNPRKGGKAEKDTVSANKK
                     VRSDKNGKAVKQDKKYREEKNAKTDSDELKAAVAAVTNDVENKKALLKQSEGMLLHVS
                     NSLKQLQEERIRQERIRQARGNLASVNRKQREAWDKFQKLNTELNRLKTEVAATKAQI
                     SRFVSGNYKNSQPNAVALFLKNAEPGQKNRFLRYTRYVNASNREVVKDLEKQQKALAV
                     QEQKINNELARLKKIQANVQSLLKKQGVTDAAEQTESRRQNAKIAKDARKLLEQKGNE
                     QQLNKLLSNLEKKKAEHRIQDAEAKRKLAEARLAAAEKARKEAAQQKAEARRAEMSNL
                     TAEDRNIQAPSVMGIGSADGFSRMQGRLKKPVDGVPTGLFGQNRSGGDVWKGVFYSTA
                     PATVESIAPGTVSYADELDGYGKVVVVDHGENYISIYAGLSEISVGKGYMVAAGSKIG
                     SSGSLPDGEEGLYLQIRYQGQVLNPSSWIR"
     gene            13313..14797
                     /locus_tag="WHR07_000838"
     CDS             13313..14797
                     /locus_tag="WHR07_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEZ2130075.1"
                     /translation="MSKPVFKKIALYTLGAISGVAVSLAVQGFAAEKDRRDNEVLPVQ
                     SIRTMAEVYGQIKANYYQDKPDADLFEGAMKGMVAGLDPHSEYMDKKGYAEIKESTSG
                     EFGGLGMEIGQEDGFVKVVSPIEDTPAEQAGVKSGDFIVKIDNVSTRGMTVSEAVKKM
                     RGKPGTKITLTLSRKNADKPIVVNLTRAIIKVKSVRHHLIEPDYGYIRVSQFQERTVE
                     SVNTAAKELVKENKGKPLKGLVLDLRDDPGGLLNGAVGVSAAFLPPEAVVVSTKGRDG
                     KDRMVLKAVPEDYVYGMGGDPLAGIPAELKTVPMTVLINSGSASASEIVAGALQDHKR
                     AVIVGTQSFGKGSVQTLIPLSNGSAVKLTTALYYTPNDRSIQAQGIVPDVEVKDKERI
                     FESREADLVGHIGNPLGGEDVNSETLAVPLEKDADKPAVKEKGKKKKDEDLSSRRIPN
                     PAKDDQLRKALDLVKSPEQWQKSLGLAAKKPVSNKDKKDKKDKK"
BASE COUNT         3533 a         3700 c         4199 g         3460 t
ORIGIN      
        1 ccggaagaaa tattttaatc cgctgtaaaa tagaaaatgc cgtctgaaca tttcagacgg
       61 catttgctca aataaacctt atcggctgtt tattcagtcg gatttatttt ttcttttgcg
      121 gaggcaggtc ggtacaagta cccaatgcca cttccgcagc cataccgatg gattcgccca
      181 aggtcgggtg cgggtggatg gttttgccga tgtctgccgc gtcgcagccc atttcgatgg
      241 caaggcagac ttcgccgatc atgtcgccac cgttcggacc gacaatgccg ccgccgatga
      301 tgcggccggt ttcggcatcg aaaatcagct tggtaaagcc gttgtcgcaa ccgttggcaa
      361 tcgcacggcc ggaagccgcc cacgggaagt tggctttggt gattttgcgg ccggatgctt
      421 tggcggacaa ctcggtttcg cccacccacg ccacttcggg ggaagtgtag gcaacgcccg
      481 gaatcacgcg cgcgtcgaag taggctttgt ggccggcgca gttttcggcg gcaacgtggc
      541 cttcgtgaac ggctttgtgc gccaacatcg gctgaccgac gatgtcgccg atggcgtaga
      601 tgtgcggcac attggtacgc atttgtttgt ccacttcgat gaagccgcga tcggttacgg
      661 caacgcctgc tttttccgcg ctgatgagtt tgccgttggg cgcgcggccg gcggcaacca
      721 atacggcatc gtagcgttgc ggctctttag gcgcatttgc accttcaaag gtaacgtaaa
      781 cgccgtcttc tttcggctcg actgcaacgg ttttggtgtt gaccataatg ttgtcaaaac
      841 ggtattcgtt ttgtttttgc catactttta ccaaatcgcg gtctgcgcct tgcatcaggc
      901 cgtccatcat ttcaaccaca tccaaacgcg aacccagcgt gctgtaaacc gtacccatct
      961 cgagaccgat aataccgccg ccgataatca gcagtttgcc cggtacttct ttcagagcca
     1021 atgcgccgct ggaatcgatg atgcgcggat cttcaggaat gaaaggcagt ttggtaacgc
     1081 ggctgcctgc tgcaatgata cagtttttga aggcaacgat ttttttctcg ccggtagggg
     1141 ctgccagttc gtacgcgtcg ccggcagtca gcgatacctc caagtggtgc gaatctaaga
     1201 attggccgtc gccttggata acatccactt tacggccttt cgccatacct gccaaaccgc
     1261 cggtgaggcg ggaaaccacg ccgtttttgt aggcgcgcag catatcgatg tcgagttcag
     1321 gctcggggta tttgataccg ttggcagcca agtggcgcac ttcgtcgata acggcggcat
     1381 tgtgcaacag ggctttggaa gggatacagc cgacgttcag gcaaacgccg cccaaggttt
     1441 tataacgttc gacgatggcg actttcaagc cttcatcggc agcagcaaat gcagcggagt
     1501 aaccgccggg accgccgccc aatacgacca cgtcgtactc ggcatcggca gaaccgccga
     1561 attgcgcggc ttgcggagcg ggagcggcag ctttgggtgc ttcttgcgca ggggcagcaa
     1621 caggtgcttc ggctttagga gaggcagccg cgccttcggc ttcaacgact acaatcaagc
     1681 cgccttcgga gattttgtcg ccgactttga ctttcacttc tttgaccacg cccgcaactt
     1741 cggcaggcac gtccatcgtc gctttgtcgg tttccaaggt aatcagggtg tcgtcaacgg
     1801 cgatggtatc gcccacattc acttcaaccg cgataatatc tacattttcg tgtccgccaa
     1861 tgtcgggcac tttcaattca actaagctca tgtctcatct ttctgaatga tgttcaaact
     1921 tccttttcag acggcacagg ccgctatgcc gtctgaagcc gatcgggtta cagggtaatg
     1981 cggcggaagt ctttcaacag cttcgccaag aatacggtga agcgcatacc ggccgcaccg
     2041 tcgatgacac ggtggtcgaa ggacaggctc aacgggcaca tcaggcgcgg ggcaaactct
     2101 ttgccgttcc aaacaggttt gatttgggat ttgcacacgc ccaagatggc gacttcggga
     2161 gcgttcacaa ttggcgtgaa gcctgtgccg ccgatgccgc ctaagctgga aatggtaaag
     2221 cacgcgcctt gcatttcttg cggtttgagc ttgccttcac gggctttttt ggacaattcg
     2281 gtcaattctt ggctgatttg tttcaagcct ttttgatcca cgtctttgat gacgggaaca
     2341 accaagccgt tcggcgtatc ggctgcgaaa ccgatgttga agtagttttt cagcaccagg
     2401 ttgtcgccgt ccagtgaggc gttgaattcg gggaatgctt tcaacgcgga aacagaggct
     2461 ttgatgatga acgccaacgg ggacagtttc acgccttcgc gttcccattc tttgttcagc
     2521 tgtttgcgga attcttccag ctcggtcatg tccgcttctt cgtgtacggt aacgtgggga
     2581 atcacaaccc agttgcggga caggttttga ccggaaattt tcttaatgcg ggacaattct
     2641 ttaacttcga cattgccgaa tttggagaag tccactttag gccacggcag taagtccaga
     2701 ccgccgccca aagatgcgct ggctgcggca ggttttgccg cgccgccctg catcacggat
     2761 ttcacaaagg ctttgatgtc gtcgcccatg atacggcctt tcaagccggt gcctttgact
     2821 tggcccaaat ccacgcccaa ttcgcgcgcc agtttgcgtg cggaaggacc ggcgtgtgct
     2881 ttggcgaaag cggcctcgtc gattttggca gcggcaggtg cagaaggtgc gggcgcggcg
     2941 gcagcagccg gaaccggagc ggcagccggt gcgggtgcgg cagcttgagc ggcaggcgca
     3001 ggggctgctg cggcagagcc ggcggtttct acttcgataa ttgcagagcc ttcggacact
     3061 ttgtcgccga cttttaagaa tacggcttta acgacaccgg cagcggtaca aggtacgtcc
     3121 attgtcgctt tgtcggtttc caaagtaatc agcgtgtcgt cttcggcaac ggtgtcgccc
     3181 actttgattt caacggcgat gacatccaca tcggtatggc cgccgatatc gggaacggct
     3241 acttgaacgg ttgcaccgcc tgcggcaacg ggtgcggcag caggtgcagg ttgtgcttcg
     3301 gcagcagcag gagcggcttc ggcagcggcg gcaccggttt caacggtcaa aattacgccg
     3361 ccttcggaga ttttgtcgcc gactttgact tttacttctt tcacgacacc ggccgcatcg
     3421 gcaggcacat ccatcgtggc tttgtcggtt tccagtgtaa tcagggtgtc gtcaacggcg
     3481 atggtgtcgc ccgctttaac ttctacggcg atgatgtcga cgttttcgtg accgccgata
     3541 tcggggactt tgatttctac gatactcatt tgagttcctt taatcttgtt cagttggatg
     3601 ccgtctgaaa gctgcttcag gcggcatcgg tacggtttgt ctgctcaaac cattcgggca
     3661 ttcggttttc agacggcctg atgtcggaat ggggcaaaca gaccgtctga aacatcaatc
     3721 agcgtttcca gctaggagct gaatcggctt tgatgccgta tttctcaatg gcttgttgaa
     3781 cggtttcttt gctgactttg ccttgttccg ccaatgcgct caatgctgcc acggcaacgt
     3841 tgtagcgatc cacttcaaag aagcggcgca ggttggcgcg gctgtcggag cggccgaagc
     3901 cgtcagtacc caagacgtgg tagtcgttcg ggatgtaggc gcggatacgg tcagcatagc
     3961 tgcggatata gtcggtagcg gcaataaccg gaccgtcatg accttgcaat ttggaagtaa
     4021 cgaaaggtac tttttcggct tccagcggat gcaggcggtt gaagcgttct acctcgacag
     4081 cgtcgcggtg cagcaggttg aaggacgggc aagaccaaat gtctgcttcc acgccgaagt
     4141 cggctttcag caattcggca ccggcaatga cttcttgcag gatggtaccg gagcccatca
     4201 attgaacttt cttatcgcct ttgccgccgg ctttcagcag gtacatacct ttcaagatgt
     4261 cttgttctgc gccttcgggc atatccggat gggtgtagtt ctcgttcatc agggtgatgt
     4321 agtagaacac gtcttcatta ttggcataca tacggcgcag accgtcttgt acgatgacgg
     4381 cgacttcgta ttggaaagtc gggtcataag atacgcagtt cggaatcagg tcggcctgga
     4441 tgtggctgtg gccgtcttcg tgttgcaggc cctcgccgtt cagcgtcgta cggccggcag
     4501 taccgcccag caggaagccg cgcgcgtgca tatcgcccgc cgcccaagcc aagtcgccga
     4561 tacgttggaa accgaacata gaatagtaaa tgtagaacgg aatcatcgcg aagttgctgt
     4621 tggcgtagct ggttgcagcc gcaatccagt cggccatcgc gcccggttcg ttaatacctt
     4681 cttgcaagat ttgaccgtca acggattctt tatagaacat cagttggtct ttgtcttgag
     4741 gggtatattg ctgacctttc ggattccaaa taccgtattg gcggaacata ccttccatgc
     4801 cgaaagtacg gctttcgtcg ggaacgatag gtacgacgcg tttgccgatt tttttgtctt
     4861 tcagcaaagt ggacaggatg cggacgaatg ccatcgtggt cgagaactcg cgttcaccgc
     4921 tggatttgag ttgtgcgtcg aatgctgaca gctcgggcac ttccaatact tcctgcgtcg
     4981 gtttgcgttg cggcaggtag ccgcccaaag catcgcggcg tgcgtgcagg tatttgtatt
     5041 cttccgtatc gggggcaaaa gtcaggtaag gcagatcgcc gctttcgatt tgttcgtcgg
     5101 taaccggaat gtcaaagcgg tcgcggaatt gtttcaggga cgctttgtcc atttttttgg
     5161 cttggtgggc aacgttctga ccttcgccgg atgcgcccat accgtaacct ttaatggttt
     5221 tcgccaagat gacggtaggt ttgccgtcgg catggttcgc tgcgcggtcg taggcgttgt
     5281 acactttttg cgggtcgtgg ccgccgcggt tcaatgccca gagttgctca tcggtcatat
     5341 cggcaaccaa tgctttcagt tcgggcgtat tgaagaagtg ttcgcgcaca tacgcgccgt
     5401 ctttggattt gtaagtttgg tagtcaccgt ccaaacattc ttccatacgt tggcgcagga
     5461 taccgtcttt gtctttcgcc aagaggcggt cccagcggcg gccccaaatg actttgacga
     5521 cattccagcc ggcgccggca aagttgcctt ccaattcttg gatgattttg ccgttgccgc
     5581 gtaccggacc gtccaagcgt tgcagattgc agttgatgac gaaaatcagg ttgtccaagc
     5641 cttcgcgtgc agccagtgcg attgcacctt gagattcggg ttcgtccatt tcgccgtcgc
     5701 cgcagaaaca ccatacttta cggcctttgg tttttgccaa accacgcgat tccaagtatt
     5761 tcaggaaacg cgcctgataa atcgccatga tgggccccaa gcccatggat acggtcggga
     5821 actgccaaaa gtcgggcaag aggtgggggt gcggatagga aggcagaccg tgtccgtcca
     5881 cttcttggcg gaagttgttc agctggtctt cggtcagacg gccctcgacg aatgcgcgtg
     5941 catagatgcc cggggcgacg tgaccttgga agaagaccaa atcgccttct tcgccttcgc
     6001 ctttggcttt ccaaaagtgg ttgaaaccga cttcgtacat ggtggcggca gattggaaag
     6061 atgcgatgtg cccacccagt tccaaatctt tcttgccggc gcgcaatacg atggcggcgg
     6121 cgttccagcg cacgaatgcg cggatgcggt gttcgatgtt ttggtcgccc ggaatgcctt
     6181 tttcgttttc aaccgaaacg gtattcaaat acggtgtggt cgtgccgtgt ggcatacgta
     6241 cgcccttgtc gcggcagtat ttgaccaggt tttccaagag gtattgcgcg cgttcgccgc
     6301 cttcatattc gaggacggag cttaacgcgt ccagccactc ttgggtttcg atagggtcaa
     6361 catcgtgtaa ttgggtggac atagtatcta tcctttatgt tgagtgttta atcggcaggg
     6421 agggtgtagc caaccccttt attttcgttt gtgaaaaata ataagcaaaa acgaaaattt
     6481 ctaaatcaaa ccgaaaaaaa taatttaagt ttaatgtttt caaaaaatta taaaagtttt
     6541 ggaaacaagg gaaaacttga aaaaaatgtt cgatctgctc cacacgaaat cctatcagca
     6601 atcgggtctg ctggcaaata accatgcctg taaaagcagg ttttatactg aagttggcgt
     6661 ttggtaaggt caagtctttt tgatttcgaa atattctgtt tgattttggc gatatttttt
     6721 cggaattgtg gtatatcgaa tcattatgtc tctgtcggca attttcctat tgtagaaaat
     6781 ctatacacaa gctttgtgga taaccgtgtt gataagccac ggcttgtgtt aaaaaagtct
     6841 tacgcaacaa atgtacgctt attttgatta aaaaataggc acatttaaat ctataaaaat
     6901 catgtgctta tgttcaatat gatgtttctg gtcatgtttt tgccgtctgt tatgggattt
     6961 gtcccgcgct tggggcaggg ggtaaatttt ggaggttggt gcaaaacctg cttttttcgc
     7021 gttacaatct gcacccgatt tacttttgaa tttgcctgtt tggaaaaata tttttatgaa
     7081 agccagccaa ttctttatct ctactttaaa agaagcccct gccgaagccg cgcttgccag
     7141 ccacaagctg atgatacgcg ccggtctgat taaagccaac gcgtccggcc tttatacttg
     7201 gatgccgatg gggctgcgcg tgttacgcaa agtcgaaaac gtcgtgcgcg aggaaatggc
     7261 gtgcgcgggc agcgtggagc tgctgatgcc ggtggtgcag cctgccgagc tgtggcagga
     7321 atccggccgc tgggaatttt acggtaaaga actgctgcgc ctgaaagacc gccacgaccg
     7381 cgatttctgc atgggaccga cctgcgagga agtcatcgcc gacatcgtgc gcaaagaaat
     7441 caacagctac aaacagctgc cgaaaaactt ttaccacatc caaaccaaat tccgcgatga
     7501 agtgcgcccg cgtttcggcg tgatgcgcgc gcgcgagttc gtcatgaaag acgcttattc
     7561 cttccatgcc gactacgcct cgcttcagac gacctatgat gccatgtatg acgcttactg
     7621 ccgcatcttt acccgtctgg gcttggcatt ccgccccgtc gccgcagaca ccggcagcat
     7681 cggcggtacg ggttcgcacg agtttcaagt gttggcggaa agcggcgaag atgttattgc
     7741 atacagcgac acttccgatt acgccgccaa tatcgagttg gcaccgacct tgccgcttaa
     7801 aggcgaacgc accgctgctc aggccgagtt gaccaaagta catacaccaa atgtcaaaac
     7861 cattgagtct ttggttgaat tcctgaatat tccggttgaa caaaccctca aatccatcgt
     7921 ggtcgaaagc gaaaacgaag gcgaaatcgt cttattactg ttgcgcggcg accatgagtt
     7981 caacgacatc aaagccgaaa aactcgcagg cgtgaaatcg ccattgacga tggcaagttc
     8041 tgccgcgatt gtcgaacagt tcggcgcaaa cggcggctct cttggtcctg tcggcttcaa
     8101 aggcaaagtc tatgccgatt tcgctaccga aaaaggcgcg gactgggtca tcggtgcgaa
     8161 cgaagacggc taccactata ccggcttcaa cttcggtcgc gatgccgccg agcctgaatt
     8221 cgtcgatttg cgtaatgtgg tcgaaggcga cgaaagcccc gacgggcaag gccgtctgaa
     8281 actggcgcgc ggcatcgaag tcggacacgt cttccagttg cgcgacaaat acacccaagc
     8341 catgaacgtg agcttcctcg acaacaacgg caaatcgcaa atcatggaaa tgggctgcta
     8401 cggtatcggc atcacccgcg tcgttgccgc cgccatcgag cagaacaacg acgaaaaagg
     8461 catcatctgg acgaaggcga tggcgccgtt tgaagtcgtt atcgtgccga tgaactacaa
     8521 aaaatcagac gccgtgcgcg aagccgccga caaaatctac gccgaactgc tggcggcagg
     8581 cgcagacgtc ctcctcgacg accgcgacga acgcgcaggc gtgttgctga acgattccga
     8641 gctgttgggt attccgcacc gcatcgtcat cggcgaccgc gctttgaaag aaggcaatgt
     8701 cgaatacgcc gaacgccgca acaacgaagc gcaggcagtt gcaatcggag aaattgttgc
     8761 gcgtgtaaca gcttcattaa atgggtaagc ttggtcaaat gctgtctgaa aataatttca
     8821 gacggcattt ttatttgggg agaaagtgaa gtggcttcag tatttttaga aggagaagca
     8881 gtcgaggtcg gcaatatttt ctgtatcggc aggaactatg ccgcacatat tgaagagtta
     8941 aaaaacgaaa taccttccga acctgtggtg tttatgaagc cgtcaggcag cattttgaat
     9001 agcggcggta caatcttgct gcccgagttt agtagggatg tgcagtttga gtgcgaactc
     9061 gtgttgctgg tcggtaagga ttcagacggc atgggagagg gtgaagatat tttgggatgt
     9121 gtggcggggt acggcgtggg tttggatttg accgcgcgag acatccaatg ccatctgaag
     9181 gcgcaggggc tgccctggct gaaggcaaaa gggttcaggc attccgcgtg cgtgtcggat
     9241 tttgcggcgg cagacagaat cggcaatccc gagaaggtgt tgttttcatt aaaacaaaac
     9301 ggcgtattga aacagcgcgg ggataccggt ttgatgattt acccgattcg ggaaatttta
     9361 cacaaactgg cggcggatta cggtttgggg aaaggggatt tggtgtttac cggaacgccc
     9421 tccggcgtgg gcgcaatcgg tgcgggggac aatttggcat tggagctgga cggcttggtg
     9481 cgcgcctctt tcacggtagg gtgttaaccg cgccgcttaa ccctcacgcc cgttgaaaca
     9541 ttccgccgga ccgccctcga aaaaaccgtg caagatggct tgcgccgcca cttggtcgag
     9601 caccgatttg cgttttttgc cgaagacctg tgcttccgaa agcaggcttt cggcatagac
     9661 ggacgacagc cgttcgtcaa cccaatagac ggggagattg aacctgccgt tcagcctgcg
     9721 tccgaacttg cgcgacaggt gcgtcatttc atgtttcgtg ccgtcggtat gcacgggcag
     9781 tccgacgaca aaataacgcg gctgccattc ttgaaccagc ttggcgattg ccgcgaactt
     9841 ttcatcgttg ctgccgccgg taacggtgct caaaggatgg gatagcccta attccgcgtc
     9901 tccttgtgcc acgccgatac gcgcttcgcc gaagtcgaat gccagtgccg ttccttttgg
     9961 aattttatgc atggccggct cccgaaaaca gggcgagcgg gtcgatgccg agtttggcga
    10021 atgcggcggc gtaacggtgt tcgtagggga tgtcgaacag gatgtgttcg tcggcgggaa
    10081 cagtcagcca cgcattgtcg gcaagttcgc gttcgagctg gccttttccc cagcttgaat
    10141 agcctatgct gatcaaggct ttgtcaaccg caccttcgcg tgaaatattt tcaatcacgt
    10201 ctcgggaaga agttagcgcg atattgtctg aaacgccgat actgctttgc cagttgccga
    10261 tcggggtatg cacgacataa cctcgctcga cttgcaccgg cccgcccatc atcacgctgt
    10321 cgtgctgcat ccgcatgggg atgtttttgc cggtggcgga aaaaatcatg tccatcgtaa
    10381 tcggagaggg tttgttgatg gcgatgccga gtgcgccgtc ttcatcgtgt ttgcagatat
    10441 agacgaccga ttgtgaaaaa aacgcgtctt ccatatcggg catggcgacg agaaagtggt
    10501 tggagaggtt catatcagcg tttgtcggga ttttctatcg ggttggaaat catgcaggcg
    10561 ccggcaagca ggttgccgga agtatcggct tgcaccccat cggtttgcgg tatgccgccg
    10621 ccgaaacagg aaaccgcgct taaggaattt ttcggcgagc cttggatgat tttatcgctg
    10681 tacaccaaat aggcgaaggt tttgcgtttg gggtcgtaat aacggacaat ctgccggctc
    10741 ttgaacgcga agctcgcacc gtgtttgaaa acttctttcg gtttgcgcac ggcggtttcg
    10801 tcaaaagaaa tcgaagatgc cgtctgaacg cacgaaaccg atgcgtcgga cgcgtcctct
    10861 tccaaattga ccatttcctt caagccgcct ttttttgcat acgaaatata acaggcaacc
    10921 ccttgaacgt cgggatcgtc gaatccttcc acttcgatac ggtcgttttt gcccagtatg
    10981 ttgaaaacgg tacttgcccg tccgatttta tcggtttcgc cgctgccgca ggcagtcagc
    11041 aggacggcgg cagacagcag tagcagtctg ttcatcaaaa tttccttatc ggttgaatcc
    11101 ccgttttccg tgaaggcggc agggcttgct ttgtttggag gggcgcacgt tcccaaaatc
    11161 gggcaacata cggtatgcgg cttaatgtgc taccctgtgt gtcggaacac aatatccgtt
    11221 gcggcattga aaatatgacg cacaatataa ggctgtttga gccgattgca agtatccgcg
    11281 caaagaaggc gcaagattgg gcaaacggca ttttcagacg gcataactga cagtataatc
    11341 caaacgtccg gctgctttcg tgcagccttc agtattatcc aactttttcc gaaggtcgaa
    11401 ccatgcgcta caaacccctt ctgcttgccc tgatgctcgt tttttccacg cccgccgttg
    11461 ccgcccacga cgcggcacac aaccgttccg ccgaagtgaa aaaacagacg aagaacaaaa
    11521 aagaacagcc cgaagcggcg gaaggcaaaa aagaaaaagg caaaaatggc gcagtgaaag
    11581 ataaaaaaac aggcggcaaa gaggcggcaa aagagggcaa agagtccaaa aaaaccgcca
    11641 aaaaccgcaa agaagcagag aaggaggcga catccaggca gtctgcgcgc aaaggacgcg
    11701 aaggggataa gaaatcgaag gcggaacaca aaaaggcaca tggcaagccc gtgtccggat
    11761 ccaaagaaaa aaacgcaaaa acacagcctg aaaacaaaca aggcaaaaaa gaggcaaaag
    11821 gacagggcaa tccgcgcaag ggcggcaagg cggaaaaaga cactgtttct gcaaataaaa
    11881 aagtccgttc cgacaagaac ggcaaagcag tgaaacagga caaaaaatac agggaagaga
    11941 aaaatgccaa aaccgattcc gacgaattga aagccgccgt tgccgctgtc accaatgatg
    12001 tcgaaaacaa aaaagccctg ctcaaacaaa gcgaaggaat gctgcttcat gtcagcaatt
    12061 ccctcaaaca gcttcaggaa gagcgtatcc gccaagagcg tatccgtcag gcgcgcggca
    12121 accttgcttc cgtcaaccgc aaacagcgcg aggcttggga caagttccaa aaactcaata
    12181 ccgagctgaa ccgtttgaaa acggaagtcg ccgctacgaa agcgcagatt tcccgtttcg
    12241 tatcggggaa ctataaaaac agccagccga atgcggttgc cctgttcctg aaaaacgccg
    12301 aaccgggtca gaaaaaccgc tttttgcgtt atacgcgtta cgtaaacgcc tccaatcggg
    12361 aagttgtcaa ggatttggaa aaacagcaga aggctttggc ggtacaagag cagaaaatca
    12421 acaatgagct tgcccgtttg aagaaaattc aggcaaacgt gcaatccctg ctgaaaaaac
    12481 agggtgtaac cgatgcggcg gaacagacgg aaagccgcag acagaatgcc aaaatcgcca
    12541 aagatgcccg aaaactgctg gaacagaaag ggaacgagca gcagctgaac aagctcttga
    12601 gcaatttgga gaagaaaaag gccgaacacc gcattcagga tgcggaagca aaaagaaaat
    12661 tggctgaagc cagactggcg gcagccgaaa aagccagaaa agaagcggcg cagcagaaag
    12721 ctgaagcacg acgtgcggaa atgtccaacc tgaccgccga agacaggaac atccaagcgc
    12781 cttcggttat gggtatcggc agtgccgacg gtttcagccg catgcaggga cgtttgaaaa
    12841 aaccggttga cggtgtgccg accggacttt tcgggcagaa ccggagcggc ggcgatgttt
    12901 ggaaaggcgt gttctattcc actgcaccgg caacggttga aagcattgcg ccgggaacgg
    12961 taagctatgc ggacgagttg gacggctacg gcaaagtggt cgtggtcgat cacggcgaga
    13021 actacatcag catctatgcc ggtttgagcg aaatttccgt cggcaagggt tatatggtcg
    13081 cggcaggaag caaaatcggc tcgagcgggt cgctgccgga cggggaagag gggctttacc
    13141 tgcaaatacg ttatcaaggt caggtattga acccttcgag ctggatacgt tgatcggatt
    13201 gccgaaacgg taggctttat gcaaatcgtg ccgatatggt gcgctgttcc gtgaagtttg
    13261 ccgtacctgt attttccggt ttttggaaat caagagagaa agttaaagaa gaatgtcgaa
    13321 acctgttttt aagaaaatcg cactttatac tttgggtgca atcagcggcg tggccgtcag
    13381 tctggcggtg cagggttttg ccgccgagaa ggaccggcgg gataacgaag tcctgccggt
    13441 gcaatccatc cgcacaatgg cggaggttta cggtcaaatc aaggcaaact actatcagga
    13501 caaacccgat gccgatttgt ttgaaggtgc gatgaagggt atggtggccg gtttggatcc
    13561 gcattccgaa tatatggata aaaaaggtta tgccgagata aaggagtcca ccagcggcga
    13621 atttggcggc ttggggatgg aaatcgggca ggaagacgga tttgtcaaag tggtttcgcc
    13681 gattgaggac acgcctgcgg aacaggcggg ggtgaaaagc ggcgatttca ttgtgaaaat
    13741 cgataatgtt tcgacacgcg gcatgacggt cagcgaagcg gtgaagaaaa tgcggggcaa
    13801 gccgggtacg aagattactt tgacgctgtc gcgcaaaaat gccgacaagc cgatagtcgt
    13861 caacctgacc cgtgccatta ttaaagtgaa aagcgtccgc catcacctga tcgaacccga
    13921 ttacggctat atccgcgtgt cgcagttcca agagcggacg gtcgaaagcg tcaataccgc
    13981 cgcaaaagag ctggtaaagg aaaataaagg aaaaccgctc aaggggctgg tgttggattt
    14041 gcgcgacgac cccggcgggc ttttgaacgg cgcggtcggc gtgtcggcgg cgtttttgcc
    14101 gcctgaagca gtcgtcgtca gcaccaaggg acgcgacggc aaagaccgca tggtactgaa
    14161 agccgttcct gaggattatg tgtacgggat gggcggcgat ccgttggcgg gcattcctgc
    14221 cgagttgaaa accgttccga tgacggtgtt gattaattcc ggttcggctt ccgcgtcgga
    14281 gattgtcgca ggtgcattgc aggatcacaa acgcgcggtc atcgtcggta cgcagagctt
    14341 cggcaaaggt tcggttcaga ctttgattcc tttgtccaac ggcagcgcgg tcaagctgac
    14401 aacggcactg tattatacgc cgaacgaccg ttctattcag gcgcagggga ttgttcccga
    14461 tgtcgaagta aaagataagg aacgcatttt tgaaagccgc gaggcggatt tggtcggaca
    14521 catcggcaat cctttgggcg gcgaggatgt gaacagtgaa acccttgccg tgccgcttga
    14581 aaaagatgcg gataagcccg ctgtaaaaga aaaaggtaaa aagaaaaagg acgaggattt
    14641 gtcttcaagg cggattccca accctgccaa agacgaccag ttgcggaaag ctttggattt
    14701 agtcaagtcg cccgagcagt ggcagaagtc tttggggctg gcggcgaaaa agccggtttc
    14761 aaataaagat aagaaagata aaaaagataa gaagtaggtt ttgacgatgc cgtctgaaag
    14821 gatttcagac ggcatattat gtttgaaagg acaggttatg agcgattttt taccggaatt
    14881 tgaaccgtgc gg
//
LOCUS       DAWGKF010000040        14078 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.040, whole genome shotgun sequence.
ACCESSION   DAWGKF010000040 DAWGKF010000000
VERSION     DAWGKF010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14078)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14078)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14078
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.040"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(52..360)
                     /locus_tag="WHR07_000839"
     CDS             complement(52..360)
                     /locus_tag="WHR07_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130076.1"
                     /translation="MTNNVDLKVPAKRYFTLDELCGLLQISPYGFAQWQHDHGVVVGY
                     GGERYTRLDVVKLLKLQSTFAPYAEGAESGSDGNRPVTLQEIGDGLKELLADLDKELC
                     "
     gene            complement(344..646)
                     /locus_tag="WHR07_000840"
     CDS             complement(344..646)
                     /locus_tag="WHR07_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002641098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HEZ2130077.1"
                     /translation="MTLTKAELADILVDKVSNVTKNDAKEIVELFFEEIRSTLASGEE
                     IKISGFGNFQLRDKPQRPGRNPKTGEEVPITARRVVTFHASQKLKSMVEHYYDKQR"
     gene            complement(720..3083)
                     /locus_tag="WHR07_000841"
     CDS             complement(720..3083)
                     /locus_tag="WHR07_000841"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEZ2130078.1"
                     /translation="MQFSYSWLKTQADTELSADKLEHLLTMSGLEVEEAETAAPAFTG
                     VVIAEVKSVEKHPDADRLNVTQVDAGTGGLVQIVCGAPNVKAGIKVPCSLPGAVLPGN
                     FKIKPTKMRGVVSDGMLCSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFT
                     LKITPNRADCLSIKGIAREVSALTGCAFRQPEIHTAPITGSRKQPVQINAPADCGRFI
                     SRVIENVNAKAATPDWMKQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGS
                     LHIRRAREGETLECLNEKTVSLSENTLVVADEKGVLSLAGLMGGAASAVSDGTQNIVL
                     EAAWFAPEIIAGKSRQYGFGSDSSFRFERGVDYRLQADAMERATELVLQICGGAAGEM
                     VEAQGELPEAKQVGLRLDRLKTVLGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSF
                     RFDIEIEADLIEEIGRVYGYENIPDDYTSGRLKMLELPETRRPRFAVYNEMAAHGYRE
                     VVSYAFVDEQWEQDFAANADPIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRV
                     RVFEIARVFGKGSDGRFVQNERIGGLWYGAAMPEQWGGKTRNADFYDIKADVENLLKN
                     KAVEFVKTGHPALHPGRAANIVSDGKVIGFVGELHPKWLQKYDLPQAPLVFEIDMAAV
                     LECGKTRYRAVSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGT
                     GLPEGMKSVAVKVILQDMENTLTDEAVEPLIGKLIGAATAAGARLRS"
     gene            complement(3138..4163)
                     /locus_tag="WHR07_000842"
     CDS             complement(3138..4163)
                     /locus_tag="WHR07_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003683077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HEZ2130079.1"
                     /translation="MVSAIDSLKKNVNYNYVNSSNTHTIQIVHVEKPEGPIKIKRGDT
                     ETSISKQAIWRLADALSTGEPVNVDRVFGASYNFRSALEALLAHTPEIYWCKLQRIQP
                     GLNKSEVVEGHKHIIWLPDRPHEKGVMKEYETDVVISEIPSNNVVYDALSLPSTHSEI
                     DIDVKRRHVQIQIALSAIGFQLGFRTWIARNDQGISYGDKKIADLDGIVQKIESEKLI
                     SSFDGAVQAAMNIDCIWFRNGKLMPAVMEVEHSTGVRSGLARMKQLKDLLPPYANTRW
                     VIVAPDEDRDKVFKEANVPMFKNLDTQYFPYSAVEELYSLCIRRKLTNKAVNEEFLDC
                     FMEKCVM"
     gene            complement(4165..5259)
                     /locus_tag="WHR07_000843"
     CDS             complement(4165..5259)
                     /locus_tag="WHR07_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003683097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HEZ2130080.1"
                     /translation="MIFSFFSGAGFLDLGFELSGFDIAFVNEVHPPFLEAYKYSRSRM
                     DIPKPKYGYFKGSIDECLYAEKAKDLAGWVKKEKQNGIIVGFIGGPPCPDFSIAGKNK
                     GKDGENGKLSQSYVDLICKNQPDFFVFENVKGLYRTAKHREFFNALKRQLSDFGYVCT
                     EKLINAIEYGVPQDRERIILVGFLSQHVDALQKFDWDAHISFPDALEKDWPTTEEVGR
                     VVSQPANIYPELTVQYWFNRNGVDTHPNASKHFQPRAGLEKFQTISEGDDKKKSYKRL
                     HRWRYSPTAAYGNNEVHIHPYLPRRISAAEALAIQSLPKEFELPDNMTLSNMFKTIGN
                     GVPFLAAKGIAMTLKSYLENHYERTKTDGC"
     gene            complement(5330..5776)
                     /locus_tag="WHR07_000844"
     CDS             complement(5330..5776)
                     /locus_tag="WHR07_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="very short patch repair endonuclease"
                     /protein_id="HEZ2130081.1"
                     /translation="MDRLTPEQRKKCMQSNKSKGTKPELALAKAMWALGLRYRKNSGS
                     IFGKPDFSFKKYKVAVFVDGEFWHGKDWEQRKAEIKGNREFWIAKIERNIRRDMEVTG
                     RLKVEGWAVLRFWSNDVVKNTTCCAEKVRQAVRDKQGLSKFQTREK"
     gene            complement(6100..7092)
                     /gene="pheS"
                     /locus_tag="WHR07_000845"
     CDS             complement(6100..7092)
                     /gene="pheS"
                     /locus_tag="WHR07_000845"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEZ2130082.1"
                     /translation="MENVNRIVAEGIAAVEAAQDFNALEQIKARYLGKTGELTGLLKT
                     LGQMSPEERKTIGAHINECKNRFQTAFNAKRDALNEAKLQARLAAEALDITLPGRAQE
                     GGSLHPVTLTLQRVVELFHGMGFEVADGPEIEDDFHNFQALNIPANHPARAMQDTFYV
                     ENGDVLRTHTSPIQIRYMLDKKEPPIRIIAPGRVYRVDSDATHSPMFHQAEGLWVEEG
                     VTFADLKAVFTDFIRRFFERDDLQVRFRPSFFPFTEPSGEIDIMGENGKWLEVGGCGM
                     VHPNVLRNVNIDPEKYTGFAFGIGLDRFAMLRYNVNDLRLFFDNDLNFLKQFAK"
     gene            complement(7438..7797)
                     /gene="rplT"
                     /locus_tag="WHR07_000846"
     CDS             complement(7438..7797)
                     /gene="rplT"
                     /locus_tag="WHR07_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005795139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEZ2130083.1"
                     /translation="MPRVKRGVTARARHQKIFALAKGYRGRRKNVYRVAKQAVMKAGQ
                     YAYRDRRQRKRQFRQLWIVRINAGARENGLSYSKFMNGLKRASIEIDRKVLADLAVFD
                     KAAFAQLVEKAKSALAA"
     gene            complement(7810..8007)
                     /gene="rpmI"
                     /locus_tag="WHR07_000847"
     CDS             complement(7810..8007)
                     /gene="rpmI"
                     /locus_tag="WHR07_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012698199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEZ2130084.1"
                     /translation="MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQL
                     RGTSMVNDRDLASVAKMLPYA"
     gene            complement(8154..8675)
                     /gene="infC"
                     /locus_tag="WHR07_000848"
     CDS             complement(8154..8675)
                     /gene="infC"
                     /locus_tag="WHR07_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEZ2130085.1"
                     /translation="MIAQEREARINGEITAKEVRLISESGEQLGVVSVREALAMAEGQ
                     DVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDEGDY
                     QIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKME
                     GRQMVMMIAPKKK"
     gene            complement(8693..10606)
                     /gene="thrS"
                     /locus_tag="WHR07_000849"
     CDS             complement(8693..10606)
                     /gene="thrS"
                     /locus_tag="WHR07_000849"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEZ2130086.1"
                     /translation="MLNITLPDGSVRQYESPVTVAQIAASIGVGLARAAVAGRVNGKL
                     VDACDPIVENSAVQIITPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGF
                     YYDIATEKPFTPEDVAAIEARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLI
                     DDMPEVEAMGMYHHQEYVDMCRGPHVPNTRFLKNFKLTKLAGAYWRGDSNNEMLQRIY
                     GTAWATKDELKAYIQRIEEAEKRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVI
                     EQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKDNMFVTSSEKREYAVKPMNCP
                     GHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQI
                     VSEARAFNELLVRIYKQFGFHDVAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACGVE
                     WEELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVM
                     LHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGF
                     RAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRKAEDLGSLDLDDFIA
                     QLQQEITDALVNH"
     gene            complement(10659..10735)
                     /locus_tag="WHR07_000850"
     tRNA            complement(10659..10735)
                     /locus_tag="WHR07_000850"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10699..10701),aa:Val,seq:gac)
     gene            10914..12029
                     /gene="tgt"
                     /locus_tag="WHR07_000851"
     CDS             10914..12029
                     /gene="tgt"
                     /locus_tag="WHR07_000851"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEZ2130087.1"
                     /translation="MLKFTLHKKDGYARRGTLELNHGKIETPVFMPVGTYGSVKAMNP
                     QNLHDIKAQIILGNTYHLWLRPGLEVVEQFGGLHGFIGWDKPILTDSGGFQVFSLSDM
                     RKLTEEGCTFKSPINGDKLFLSPEISMKIQTVLNSDIAMQLDECTPGEATREQAKKSL
                     QMSLRWAERSKKAFEDLKNPNALFGIVQGAMYEDLREESLRGLEQFDFPGLAVGGLSV
                     GEPKPEMYRMLRAVGPILPEHKPHYLMGVGTPEDLVYGVAHGIDMFDCVMPTRNARNG
                     WLFTRFGDLKIKNAKHKLDKRPIDESCTCYACQNFSRAYLHHLHRTGEILGAQLNTIH
                     NLHFYQVIMAEMREAVEQGKFADWQARFHENRARGTD"
     gene            12039..13121
                     /locus_tag="WHR07_000852"
     CDS             12039..13121
                     /locus_tag="WHR07_000852"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEZ2130088.1"
                     /translation="MPSEAASDGILPLYPTRTIFQKPIMLPFFPEPSLSYTQQNRTAV
                     LLLNLGTPDAPTAQAVRPYLKSFLTDRRVVELPKWLWYPILHGLVLTLRPKKSAHAYE
                     KIWFKEGSPLEVYTARQAAALAKRMPDLIVRHAMTYGNPSVADVLSELKAQGAGRLLV
                     IPMYPQYAASSSGAAVDKVCEQLLLQRNQMSVRTVSRFYDDTGYIDAMKNHILRYWAE
                     HGRGKKLMLSFHGVPQKHHDLGDPYPDECRHTAKLLAEALELTEDQYVVSFQSQFGRA
                     KWVTPSTQDLFGKLPKQGVTELDVFCPGFLADCLETMEEIALMGREQFYEAGGKSYRY
                     IPCLNDNPDWIDALVALAEENLGGWR"
     gene            13313..13714
                     /locus_tag="WHR07_000853"
     CDS             13313..13714
                     /locus_tag="WHR07_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEZ2130089.1"
                     /translation="MNTTRLPTALVLGCLCAAASAADNSIMTKGQKVYESNCVACHGK
                     KGEGRGTMFPPLYRSDFIMKKPQVLLHSMVKGINGTIKVNGKTYNGFMPATAISDADI
                     AAVATYIMNAFDNGGGSVTEKDVKQAKGKKN"
     gene            complement(13777..14067)
                     /locus_tag="WHR07_000854"
     CDS             complement(13777..14067)
                     /locus_tag="WHR07_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130090.1"
                     /translation="MAKYFTETGISVREYFDFFGEFVVLPAARSGDLALAYGLRLEAG
                     EEGLSLAELFDKRSDSQEPVECGRIDIGGFMLTAKEVDGDGNIGSMGLKVPR"
BASE COUNT         3474 a         3800 c         3189 g         3615 t
ORIGIN      
        1 ttttttagcg tgtaaaacaa aaccggctgc atacctgcaa ccggcctcaa atcagcacaa
       61 ttccttatcc aaatccgcca acagctcttt cagaccgtct ccgatttcct gaagcgtaac
      121 cggacggttg ccgtccgaac ccgattccgc accttctgca tacggtgcaa acgtgctctg
      181 caatttcaac agtttcacca catccaaacg ggtgtagcgt tcgccgccgt aaccgacaac
      241 cacaccgtga tcatgctgcc attgcgcaaa accatagggg ctgatttgca acagtccgca
      301 caactcgtcc agcgtgaaat agcgttttgc gggaaccttc aaatcaacgt tgtttgtcat
      361 agtagtgttc caccatgctt ttgagtttct ggctggcatg gaaagttacc acgcggcggg
      421 cggtaatcgg cacttcctcg ccggttttag ggttacgacc cgggcgttgc ggcttgtcgc
      481 gcaactggaa atttccgaaa ccggaaattt tgatttcttc gccgcttgcc aaagtgctgc
      541 ggatttcttc aaaaaagagt tcgacgattt ctttggcatc gtttttggtg acgttgctga
      601 ctttgtctac caaaatatcg gccagttctg ctttagtgag agtcatatga ttaccttctg
      661 ttgtaacagt tgtggattat taccaatttt tatttaaaat tcaagcgaat atttattttt
      721 taactgcgaa gccgcgcccc tgccgccgtt gccgcgccaa tcagttttcc gataagcggc
      781 tcgaccgcct catccgtcag cgtgttttcc atatcctgca aaatcacttt gaccgccacg
      841 ctcttcatcc cttcgggcag tcccgtgccg cgatacacgt caaacacgct gatttcctgt
      901 accaacttgt ttgccgcgcc tttcaagaca agcagcaaat catcatggct catagcttcc
      961 ggcatcacaa acgccaaatc gcggcgcacc ggctggaatt tcgatacggc ccgatagcgc
     1021 gttttcccgc attccaacac ggccgccata tcgatttcaa ataccagcgg cgcttgcggc
     1081 aggtcgtatt tttgcagcca tttcggatgc agttcgccga caaagccgat gactttgccg
     1141 tctgaaacga tattggcggc acgtccggga tgcagggcgg gatgtccggt tttaacgaac
     1201 tcgactgctt tgtttttcaa cagattttcc acatctgcct taatgtcgta aaaatccgca
     1261 ttgcgcgttt tcccacccca ttgttcgggc attgccgcgc cgtaccacag accgccgatg
     1321 cgttcgtttt ggacaaaccg gccgtctgaa cctttgccga acacgcgggc gatttcaaac
     1381 acgcgcacgc ggttttgttt gcggttcagg ttgttttgca aaatttccac caagccgccg
     1441 atgagtgtgg aacgcatcac ggcatattgc gccgccagcg ggttttgcag gcggatgggg
     1501 tcggcgttgg cggcaaaatc ttgttcccac tgctcgtcaa cgaaggcata gctgaccact
     1561 tcgcggtagc cgtgcgccgc catttcgttg taaacggcaa aacgcgggcg gcgtgtttcg
     1621 ggcagttcca gcattttcag acggcctgac gtgtaatcgt cggggatgtt ttcatagccg
     1681 taaacgcgtc cgatttcttc aatcaaatcg gcctcaattt cgatgtcaaa acggaagctc
     1741 ggcgcggtaa cgcggaagcc ttccgccgtt ttctcgggct gcaggcccaa gtgttgcaaa
     1801 atggtttcca cctgttcggc aggaatgtcc acgcccaaca cggttttcag acggtccaaa
     1861 cgcagtccga cctgcttggc ttcgggcaat tcgccttgcg cttccaccat ctcgcctgcc
     1921 gcaccgccgc aaatctgcaa caccaattcg gtagcacgtt ccatggcatc cgcctgcaaa
     1981 cggtaatcca cgccgcgctc gaagcggaac gacgaatccg aaccgaaacc gtattggcgc
     2041 gatttgccgg cgatgatttc gggcgcaaac caagccgctt ccagcacgat attttgcgtg
     2101 ccgtctgaaa ccgcgctcgc cgcgccgccc attaagcccg ccaaactcaa cacgcctttt
     2161 tcgtccgcca cgaccagcgt gttttcagac agggaaacgg ttttctcgtt caggcattcc
     2221 agcgtttccc cttcgcgcgc gcggcggatg tgcaggctgc cggaaagttt gtcggcatca
     2281 aaaacgtgca tcggctgacc gatttccagc atcacataat tgccgatgtc caccagcgcg
     2341 gaaatactgc ggatgccgct gcgctccaaa cgttgtttca tccaatcggg agtagccgct
     2401 ttcgcattga cattttcaat aacgcggctg ataaaacggc cgcaatcggc aggcgcgtta
     2461 atctgcacgg gctgttttcg actgcccgtg atcggcgcgg tatggatttc gggctgcctg
     2521 aacgcgcacc ccgtcaatgc ggacacttcg cgcgcaatgc ctttgatgct caagcagtcg
     2581 gcgcggttag gcgtaatttt caacgtaaac agcgtatcgt ccaaatccaa gtattcgcgg
     2641 atattggtac cgacgggcgc atcttcaggc agaatgtgca ggccgttcac accgtcgtcg
     2701 ggcagaccga gttcgtcggt ggaacacaac atcccgtccg acaccacgcc gcgcattttg
     2761 gtcggcttga ttttgaaatt acccggcaaa acggcacccg gcagcgaaca cggcactttg
     2821 atgcccgctt tcacattcgg cgcaccgcac acgatctgaa ccaacccacc cgtacccgca
     2881 tcgacttggg taacgttcaa acggtcggca tcaggatgtt tttcaacgga tttcacttcg
     2941 gcaattacca cacccgtaaa cgcaggcgcg gcagtctcgg cttcttccac ttccaagccg
     3001 gacatcgtta acaggtgttc cagcttatcg gcggaaagtt cggtatcggc ttgggttttc
     3061 agccatgagt aggagaattg catatttttc ctaaggatta aatttgattg gacaacttaa
     3121 gggtaaccga gtgtaaatta cattacacat ttttccataa agcagtctaa aaattcttca
     3181 ttgacagctt tatttgtcaa tttccggcga atgcacaagg aatacaactc ttcaactgcg
     3241 gaataaggaa aatattgggt atctaaattt ttaaacatcg gaacattcgc ttctttaaaa
     3301 actttatccc tatcttcatc aggagcaacg ataacccagc gcgtattagc atatggtggc
     3361 aacaggtctt tcaactgctt catccgtgca aggccggaac gtacacccgt actatgttcc
     3421 acttccatca ccgccggcat cagttttcca ttcctgaacc agatgcaatc aatattcatt
     3481 gccgcctgaa ccgcgccgtc aaacgaactg atcagtttct cgctttctat cttttgtacg
     3541 ataccatcca aatcagcaat tttcttatcc ccataactaa taccttggtc gtttctcgca
     3601 atccacgtcc tgaaaccaag ttgaaaacct attgctgaaa gggcaatctg gatttgcacg
     3661 tggcggcgtt ttacatctat atctatttct gaatgggttg aaggaaggga taaagcatcg
     3721 taaaccacat tgttggaggg gatttccgaa ataacgacat ctgtctcata ttccttcatt
     3781 acgccttttt catgtggcct atcgggaagc caaataatgt gcttgtgccc ttccaccacc
     3841 tcgcttttat tcagacccgg ttgtatccgc tgcaatttgc accagtaaat ttcaggtgta
     3901 tgggcaagca atgcctccag tgcggaacga aagttataac ttgcgccaaa caccctgtcc
     3961 acattgacag gctcccccgt ggacaacgca tctgccaacc gccaaattgc ttgtttcgat
     4021 atcgaagttt ccgtatctcc ccttttaatc ttaatcggac cttccggttt ttcaacatgg
     4081 acgatttgta tggtatgcgt atttgagctg ttcacatagt tataattgac attttttttc
     4141 aagctatcaa tcgcactgac caaattagca gccgtcagtt tttgtccgct catagtgatt
     4201 ctccaaataa gattttaatg tcatcgctat cccttttgct gccaaaaacg gtacaccgtt
     4261 gcctatagtt ttgaacatat tgctcaatgt catgttatca ggcagctcaa actccttcgg
     4321 caaagactgt attgccaatg cctccgcagc ggaaatcctt cttggcagat agggatgaat
     4381 gtggacttcg ttgtttccgt atgcagcagt cggagaataa cgccagcggt gtaggcgttt
     4441 ataggacttc tttttatcat ccccttcgct tatggtttga aatttttcta aacccgctct
     4501 tggttggaag tgtttgctcg cattcgggtg tgtatccacc ccattgcgat tgaaccaata
     4561 ctgaacggtc aactcagggt atatgtttgc aggctgactg accactcttc ctacttcttc
     4621 tgtcgtaggc caatcttttt ccaaggcatc agggaatgaa atatgagcat cccaatcaaa
     4681 cttctgcaaa gcatcaacat gctgactcaa aaaacccact aggataatcc tttccctgtc
     4741 ttgcggtacg ccgtattcga tggcattgat gagtttttca gtgcatacat atccaaaatc
     4801 agaaagttgc cgtttcaacg cattgaaaaa ctccctatgc ttggcagtcc tatatagtcc
     4861 tttcacattc tcaaatacaa aaaaatcagg ctggttttta caaattaaat ccacataact
     4921 ttgtgataac ttaccattct ccccatcctt acctttattt ttccctgcaa tagaaaaatc
     4981 cggacatggg ggacctccaa taaatccgac aataatgcca ttttgttttt cctttttaac
     5041 ccagccagcc aaatcttttg ctttctcagc ataaagacat tcgtcaatac tacccttaaa
     5101 atatccgtat ttaggcttcg ggatatccat tctgcttcga gagtatttat atgcttccaa
     5161 aaatggggga tggacttcat taacgaaggc aatatcaaat cctgacaact cgaagcccaa
     5221 atccaaaaag cccgcaccag agaaaaaaga aaaaatcaaa gttttttttc tttcctgccg
     5281 tatgcttata tccaaattgc agcttttatc cgtcaactgg aaggggagat tatttttctc
     5341 tcgtttgaaa ttttgacaat ccctgtttgt cgcggacggc ttgtctgact ttttcggcac
     5401 agcaggttgt atttttaacg acatcattac tccaaaaacg taaaaccgcc cagccctcga
     5461 ccttcagacg gcctgttact tccatatccc ttcggatatt gcgttctatc ttggcaatcc
     5521 aaaattcgcg gttgcccttt atttccgcct ttctctgttc ccaatccttg ccgtgccaaa
     5581 actcgccatc aacaaacacg gcaactttat attttttaaa tgaaaaatca ggcttcccaa
     5641 aaatgcttcc gctatttttc cgatacctga gccccaaagc ccacatcgcc ttcgccaacg
     5701 caagctcggg cttcgtcccc ttgcttttgt tggactgcat acattttttg cgctgttcgg
     5761 gggttaatct gtccatttcg tgaggcctga aacgcgttta tacgaaagcg cattcatttt
     5821 acgcggcatc gttgcggatt ccggcagttt tgcacccctt gcaaggaaac aacaaaaccc
     5881 aatcgcgcag gaagccacct gtttcgtcag gttttccctg caaagccgca aggttcgcag
     5941 ccggacggac tcaaaattac caagcatccc atccgcacaa atcttcagaa cgcatcaatt
     6001 catctgccga aatcccgccg aaatcttgcc gcaggctttt tcagcccgtc cggccggaca
     6061 atatgcgggt tgcactccgc ttgcaggctg cccgcaccat tatttcgcaa actgcttcaa
     6121 aaaattcaaa tcgttatcaa aaaacaagcg caaatcgttc acgttgtaac gcagcatcgc
     6181 gaaacggtcg agaccgatac cgaaagcgaa accggtgtat ttttcgggat cgatattcac
     6241 atttctcaac acgttgggat gcaccatgcc gcagccgccg acttccagcc atttgccgtt
     6301 ttcgcccata atgtcgattt cgccagacgg ttcggtgaac gggaagaaag acgggcggaa
     6361 acgtacttgc aaatcatcgc gttcaaagaa gcgacggata aaatccgtga acactgcttt
     6421 taagtcggca aaagttacac cctcttctac ccacaaacct tccgcctgat ggaacatagg
     6481 cgagtgcgtg gcatcgctgt ccacacggta aacgcggccg ggggcgataa tgcggatggg
     6541 cggctctttt ttatcgagca tatagcggat ttgaatcggg gaagtgtgcg tacgcaaaac
     6601 atcaccgttt tcaacgtaaa acgtatcctg catcgcacgg gcaggatggt ttgcagggat
     6661 gttcagggct tggaaattgt gaaaatcgtc ttcgatttca ggcccgtccg ccacttcgaa
     6721 acccattccg tgaaagagtt cgaccacacg ttgcaaggtc agggttacgg gatgcaggct
     6781 gccgccttcc tgagcgcgtc cgggcagggt aatgtcgagg gcttcggcgg caagtcgggc
     6841 ttgcagcttg gcttcgttga gggcatcgcg tttggcatta aaagccgtct gaaaccggtt
     6901 tttgcattca ttgatatgcg cacctatggt tttgcgctct tcaggcgaca tttgccccaa
     6961 agttttcaga agtccggtca actcgccggt tttgccaaga taacgggctt tgatttgttc
     7021 tagagcgttg aagtcttgcg cagcttctac tgcggcaatg ccttctgcaa cgatgcggtt
     7081 tacattttcc ataatatcaa gtctgtcaat taatgatatg ccacctgaaa caacgaggcc
     7141 gcctgtatag cctgacatat cagactcttc agacgacctt attttcttca cggtcaatcc
     7201 attggataaa ttttctgtat agtggattaa atttaaacca gtacggcgtt gcctcgcctt
     7261 gccgtactat ctgtactgtc tgcggcttcg tcgctttgtc ctgatttaaa tttaatccac
     7321 tatattttaa cgcaaattta tttaaaaaaa tagactttaa agaaagaaaa tcaatcacat
     7381 agaatttctg caaacaaaga aaaaaggaag ccgcagcttc cttttcaatt ttttggatta
     7441 agcagccaaa gcagatttgg ctttttcaac caattgtgca aaagcggctt tatcgaacac
     7501 ggccaaatca gccaatactt tgcggtcgat ttcaatagag gcgcgtttca gaccgttcat
     7561 aaatttgctg taagacaacc cgttttcacg cgcacctgca ttgatacgga caatccacaa
     7621 ttgacggaat tggcgtttgc gttggcggcg gtcgcggtat gcgtattggc cggctttcat
     7681 taccgcctgc ttggcaacgc ggtaaacgtt tttacgacga ccgcggtagc ctttggctaa
     7741 cgcgaagatt ttttggtgac gggcacgggc ggtaacaccg cgttttacgc gtggcatatt
     7801 ctaaactcct taagcgtagg gtaacatttt agcaacagaa gccaaatcgc gatcatttac
     7861 catagaggta ccgcgcagtt ggcgtttgtt tttggtggtc tttttagtca agatgtggcg
     7921 tttgaacgca tgagcgcgtt tcacaccgcc gttacccagt actttaaagc gttttttcgc
     7981 gctagacttg gttttcattt taggcatggg aaaactccat tcgttatcgg ataaggcatt
     8041 agggggtttt aaaacatcgg tttcaaacac ttgaacccac aatgccacgg ttttttgccg
     8101 caattaaaaa cttactccga agcggcgatc ggagtaagcg gagaattata gctttatttt
     8161 ttcttcggcg caatcatcat caccatttgg cgaccttcca ttttgggaaa ggactcgatt
     8221 tgcgccactt cagccaaatc ttcttttaca cgttccaaaa gttgcgcgcc gagttgctgg
     8281 tgagccattt cacggccgcg aaaacgcaat gtcactttga ctttatcgcc gtcggcaagg
     8341 aagcggttaa tgttgcgcat cttgatttga taatcgccct catccgtacc cggacggaat
     8401 ttgatttcct tgatttgcac ctgcttttga tttttcttgg cttcgtcgcg cttcttggct
     8461 tgttggtatt tgtatttacc gtaatccatc agtttgcaca caggcggttt agcagttggg
     8521 gaaatctcta ccaaatcgac atcctgccct tcggccatag ccaaagcttc acgaactgaa
     8581 acgacaccaa gctgttcgcc tgactcactg attaaacgca cttctttggc ggtaatttcg
     8641 ccgttgattc gtgcttcgcg ttcttgagcg atgatgaata ctcctataaa aattaatgat
     8701 tgacgagggc atcagtgatt tcttgctgca attgcgcaat gaaatcatcc aaatccaaag
     8761 aacccaaatc ttctgctttg cggcgtaccg ccactttgtt ttcctgcttt tctttatcgc
     8821 cgacaacgat ttgataagga aaacggtatt ggctgttgtc gcggattttg taaccgattt
     8881 tttcgttacg caaatccaac tcggcgcgga atcctgccgc ctgcaatttg gcagccactt
     8941 cacggcagta atccgcttga ttttcggtga tattcataat caccatttga accggcgcca
     9001 gccataacgg gaaagagcct gcatggttct caatcagaat gccgataaac cgctccaaag
     9061 aacccaaaat ggcgcggtgc aacattacag ggcgagcgcg gtcattgttt tcggttacat
     9121 attctgcatc caagcgttcc ggtaagacga aatctagttg caatgtaccg cattgccaag
     9181 aacgacccaa ggcatctttg acgtgatatt cgattttagg cccgtaaaac gcaccttcgc
     9241 caggcaactc ttcccactct acgccacaag cggtcaatgc atcacgcaag ccttgttcgg
     9301 ccttatccca aacttcgtca gaacctgcac gttgttcagg gcggagggac aacttcacag
     9361 caacatcatg gaaaccgaac tgtttgtaga tgcgaaccaa caattcattg aatgcgcgcg
     9421 cttcgctgac gatttggtct tcggtacaga aaatatgcgc atcatcttgc acaaaaccgc
     9481 gaacacgcat cagaccatgc aatgcaccgc ttggttcatt gcggtggcaa gaaccgaact
     9541 cggccaaacg catcggcaaa tcgcgatatg agcgcaaacc gttattaaaa atttgcacat
     9601 gacccggaca gttcatcggt ttcaccgcgt attcgcgttt ttctgaactg gtcacgaaca
     9661 tattgtcttt gtagttgtcc caatggccgg atttttccca aaaggtttta tccataattt
     9721 gaggcgtttt gacctcttta taaccggcgg cgttcagctc tttacgcata tgctgttcaa
     9781 tcacttgcca caaagcccag cctttaggat gccaaaacac catgcccggc gcttcgtctt
     9841 gcagatggaa cagatccaat tgcttgccaa gtttgcggtg gtcgcgcttt tcggcttctt
     9901 cgatacgttg aatataggct tttaattcgt cttttgtcgc ccaagccgta ccgtatatgc
     9961 gttgcagcat ttcattattg ctgtcgccgc gccagtatgc gcccgccaac ttggtcagtt
    10021 tgaagttttt caggaaacgg gtattcggaa cgtgcggtcc gcggcacata tcgacatatt
    10081 cctgatgatg atacatcccc atcgcttcca cttcgggcat atcgtcaatc aggcgcagtt
    10141 tgtattcttc gccgcgctct tgaaaaattt taatcgcctc cgcacgcgga gtcatgattt
    10201 tgaccacatc atagtcttgg gcaatcaatt ctttcatacg cgcttcaatg gcggcaacat
    10261 cttccggtgt aaacggtttt tccgtggcga tgtcgtaata aaagccctct tcaatgacgg
    10321 ggccgataac catttttgca ttaggataga gttgcttgac ggcatgcccg acaagatggg
    10381 cgcaggaatg gcggatgatt tcgatgcctt cctgatcttt cggagtaatg atttgaacag
    10441 cagaattttc aacaatcggg tcgcacgcat cgaccaattt gccgtttacc ctgcctgcca
    10501 ccgccgccct cgccaaaccg acaccgatag acgcagcaat ttgagccacg gtaacggggg
    10561 attcgtattg gcggactgag ccgtccggca aggtaatgtt caacatcaaa cgctccgaaa
    10621 gattaaaaaa taacggcata aatgccgtta tgggaatttg gtaggcacga ttggattcga
    10681 accaacgacc cccaccatgt caaggtggtg ctctaaccaa ctgagctacg tgccttcaaa
    10741 gaatttttgc attttatcgg gtcgttttaa tttttgcaag aggtatgtgc atttctttat
    10801 gcaacattgt ggcaagattt ggggatgtcg tctgaaaaac cgtgggaatt catttataat
    10861 gccgtctttt aaaacatatt tcgacccctg tcgcccaact gacattcaat cttatgctta
    10921 aatttacctt acacaaaaaa gacggatacg cccgacgcgg cacgctggag ttgaaccacg
    10981 gcaaaatcga aacgccggta tttatgcctg tcggtactta cggctcggtt aaggcgatga
    11041 acccgcaaaa cctgcacgac atcaaggcgc aaattatttt gggcaacact tatcatttgt
    11101 ggctgcgtcc gggcttggag gtcgtcgaac agtttggagg gcttcacggc tttatcggct
    11161 gggacaaacc gattctgacc gactcgggcg gttttcaggt tttttctttg tcggatatgc
    11221 gcaagctgac ggaagaaggc tgtacgttca aaagcccgat caacggcgac aagctgtttt
    11281 tatcgcctga aatttccatg aaaatccaaa cggttttgaa ctcggacatc gcgatgcagc
    11341 tggacgaatg cacgccgggc gaagcaacgc gcgaacaggc gaaaaaatcg ctgcaaatga
    11401 gcctgcgctg ggcggaacgg agcaaaaaag cctttgaaga tttgaaaaac ccgaacgcgc
    11461 tgttcggcat cgtgcaaggc gcgatgtatg aggatttgcg cgaagaatcg ctgcgcggtt
    11521 tggaacagtt tgattttccc ggccttgccg tcggcggttt gtccgtcggc gaacccaagc
    11581 ccgaaatgta ccgtatgctg cgcgccgtcg gtccgattct gccggaacac aagccgcatt
    11641 acctgatggg cgtaggcacg ccggaagacc tcgtgtacgg cgtggcacac ggcatcgata
    11701 tgttcgactg cgtgatgccc acccgcaatg cacgcaacgg ctggctgttt acccgtttcg
    11761 gcgatttgaa aatcaaaaac gccaaacaca agctcgacaa gcgtccgata gacgaaagct
    11821 gcacctgcta cgcctgccaa aacttcagcc gcgcctacct gcaccatctg caccgcaccg
    11881 gcgaaatctt gggcgcacag ttgaacacca tccacaatct gcatttctac caagtcatta
    11941 tggcggaaat gcgcgaagcc gtcgaacaag gcaaatttgc cgactggcag gcgcgattcc
    12001 acgaaaaccg cgcacgcggc acagactgat tccctgcaat gccgtctgaa gccgcttcag
    12061 acggcatttt gccgctttac cctacccgca ctatttttca gaaaccgatc atgcttccat
    12121 tctttccaga accctccctt tcctatacgc aacaaaaccg taccgccgtt ttgctgttga
    12181 acctcggcac gcccgacgcg ccgaccgcgc aggcggtacg accttatctg aagtcctttc
    12241 tgaccgaccg gcgcgtcgtc gaactgccca aatggctgtg gtatcccatt ctgcatggtc
    12301 tggtactgac gctccgcccc aaaaaaagcg cgcacgccta tgaaaaaatc tggtttaagg
    12361 aaggttcgcc cttagaagtt tacacagcac gccaagctgc cgcgcttgcc aaacgtatgc
    12421 ccgacctcat cgtccgccac gccatgacct acggcaatcc ttcggtggca gacgtattgt
    12481 cggaactgaa ggcgcaaggc gcgggcagac tgctggtcat cccgatgtac ccgcaatatg
    12541 ccgcttccag cagcggagcg gcagtagata aggtgtgcga acaattactg ctgcaacgga
    12601 accaaatgag cgtccgcacc gtttcgcgct tttatgacga taccggctac attgatgcga
    12661 tgaaaaacca catcctccga tattgggcgg aacacgggcg cgggaaaaaa ctgatgttga
    12721 gttttcacgg cgtaccgcag aagcaccacg acctcggcga cccctatccc gacgagtgcc
    12781 gccacaccgc caaactgctt gccgaagcac tggaactgac cgaagaccaa tatgtcgtat
    12841 cgttccaaag ccaattcggc agggcaaaat gggttacacc gagcacgcag gatttgttcg
    12901 gcaaactgcc caaacagggg gtaaccgagc tggacgtatt ttgcccgggc tttttggcag
    12961 actgtttgga aaccatggaa gaaatcgccc tgatggggcg ggaacagttt tacgaagcag
    13021 gcggcaaaag ctaccgctac atcccctgcc tcaacgacaa ccccgactgg atagacgcac
    13081 tcgtcgcact tgccgaagaa aaccttggcg gctggcgttg aaactgtttg acccatgtct
    13141 aaaatgccgt ctgaacgccg tgttcagacg gcattttccc gctactttag cgtatgatgg
    13201 catctatgcc ggacaacaac atcaagtgca accttactac cgattcggca aaaaaatctt
    13261 tcacccgcta cgcaaaatca acaacaaagt ttcaaacatt aaggaaacac caatgaacac
    13321 aacccgactg ccgaccgccc tcgtcttggg ctgcctctgc gccgccgctt ctgccgccga
    13381 caacagcatc atgacaaaag ggcaaaaagt gtacgaatcc aactgcgtcg cctgccacgg
    13441 caaaaagggc gaaggccgcg gaaccatgtt tccgccgctc taccgctccg acttcatcat
    13501 gaaaaaaccg caggtgctgc tgcacagcat ggtcaaaggc atcaacggta caatcaaagt
    13561 caacggcaaa acctacaacg gattcatgcc cgcaaccgcc atcagcgatg cggacattgc
    13621 cgccgtcgcc acttatatca tgaacgcctt tgacaacggc ggcggaagcg ttaccgaaaa
    13681 agacgtaaaa caggcaaaag gcaaaaaaaa ctaaacagac aaaatgccgt ctgaaaccgg
    13741 caatccggct tcagacggca ttcaaatcaa acctttctaa cgcggtactt tcagccccat
    13801 agacccgata ttgccgtccc cgtcaacctc cttcgcggtc agcataaagc cgccgatgtc
    13861 aatacggccg cactcgaccg gctcctgact gtcggaacgc ttatcgaaaa gctcggcaag
    13921 gctcaaaccc tcttcgcccg cttccagcct caaaccgtaa gcaagtgcca aatcacccga
    13981 acgtgctgcc ggcaaaacga caaactcacc gaagaaatca aaatactcac ggacgctaat
    14041 acccgtctcg gtaaagtatt tcgccatttt atagtgaa
//
LOCUS       DAWGKF010000041        13952 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.041, whole genome shotgun sequence.
ACCESSION   DAWGKF010000041 DAWGKF010000000
VERSION     DAWGKF010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13952)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13952)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13952
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.041"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(197..4366)
                     /locus_tag="WHR07_000855"
     CDS             complement(197..4366)
                     /locus_tag="WHR07_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB"
                     /protein_id="HEZ2130091.1"
                     /translation="MTDTAPTDTDPTENGTRKMPSEHRPTPPAKKRRPLLKLSAALLS
                     VLILAVCFLGWLAGTEAGLRFGLYQIPSWFGVNISSQNLKGTLLDGFDGDNWSIETEG
                     ADLKISRFRFAWKPSELMRRSLHITEISAGDIAIVTKPTPPKEERPPLSLPDSIDPPA
                     AVYLDRFETGKISMGKAFDKQTVYLERLDASYRYDRKGHRLDLKAADTPWSSSSGSAS
                     VGLKKPFALDTAIYTKGGLEGKTIHSTARLSGSLKDVRAELAIDGGNIRLSGKSVIHP
                     FAESLDKTLEEVLVKGFNINPAAFVPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENT
                     KAGFADRNGIPVRQVLGGFVIRQDGTVHIGNTSAALLGRGGIRLSGKIDTEKDILDLN
                     IGINSVGAEDVLQTAFKGRLDGSIGIGGTTASPKISWQLGIGTARTDGSLAIASDPAN
                     GQRKLVLDTVNIAAGQGSLTAQGYLELFKDRLLKLDIRSRAFDPSRINPQLPAGNING
                     SINLAGELAKEKFTGKMRFLPGTFNGVPIAGSADIVYESRHLPRAAVDLRLGRNIIKT
                     DGGFGKKGDRLNLNITAPDLSRFGFGLAGSLNVRGHLSGDLDGGIRTFETDLSGAARN
                     LHIGKAADIRSLDFTLKGSPDTSRPIRADIKGSRLSLSGGAAVVDTADLMLDGTGVQH
                     RIRTHAAMTLDGKPFKFDLDASGGINRELTLWKGSIGILDIGGAFNLKLQNRMTLEAG
                     AERVAASAANWQAMGGSLNLQHFSWDRKTGISAKGGARGLHIAELHNFFKPPFEHNLV
                     LNGDWDVAYGRNARGYLNINRQSGDAVLPGGQALGLNAFSLKTRFQNDRIGILLDGGA
                     RFGRINADLDIGNAFGGNMANAPLGGRITASLPDLGTLKPFLPAAAQNITGSLNAAAQ
                     IGGRVGSPSVNAAVNGSSNYGKINGNITVGQSRSFDTAPLGGRLNLTVADAEVFRNFL
                     PVGQTVKGSLNAAVTLGGSIADPHLGGSINGDKLYYRNQTQGIILDNGSLRSHIAGRK
                     WVIDSLKFRHEGTAELSGTVGMENSGPDVDIGAVFDKYRILSRPNRRLTVSGNTRLRY
                     SPQKGISVTGMIKTDQGLFGSQKSSMPSVGDDVVVLGEVKKEAAAPLPVNMNLTLDLN
                     DGIRFAGYGADVTIGGKLTLTAQSGGSVRGVGTVRVIKGRYKAYGQDLDITKGTVSFV
                     GPLNDPNLNIRAERRLSPVGAGVEILGSLNSPRITLTANEPMSEKDKLSWLILNRAGS
                     GSSGDNAALSAAAGALLAGQINDRIGLVDDLGFTSKRSRNAQTGELNPAEQVLTVGKQ
                     LTGKLYIGYEYSISSAEQSVKLIYRLTRAIQAVARIGSRSSGGELTYTIRFDRFSGSD
                     KKDSAGNGKGK"
     gene            complement(4421..6268)
                     /locus_tag="WHR07_000856"
     CDS             complement(4421..6268)
                     /locus_tag="WHR07_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor"
                     /protein_id="HEZ2130092.1"
                     /translation="MHDTRTMMIKPTALLLPALFFFPHAYAPAADLSENKAAGFALFK
                     NKSPDTESVKLKPKFPVRIDTQDSEIKDMVEEHLPLITQQQEEVLDKEQTGFLAEEAP
                     DNVKTMLRSKGYFSSKVSLTEKGGAYTVHITPGPRTKITNVGVTILGDILSDGNLAEY
                     YRNALENWQQPVGSDFDQDSWENSKTSVLGAVTRKAYPLAKLGNTRAAVNPDTATADL
                     NVVVDSGRPIAFGDFEITGTQRYPEQIVSGLARFQPGTPYDLDLLLDFQQALEQNGHY
                     SGASVQADFDRLQGDRVPVKVSVTEVKRHKLETGIRLDSEYGLGGKIAYDYYNLFNKG
                     YIGSVVWDMDKYETTLAAGISQPRNYRGNYWTSNVSYNRSTTQNLEKRAFSGGIWYVR
                     DRAGIDARLGAEFLAEGRKIPGSDVDLGNSHATMLTASWKRQLLNNVLHPENGHYLDG
                     KIGTTLGTFLSSTALIRTSARAGYFFTPENKKLGTFIIRGQAGYTVARDNADVPSGLM
                     FRSGGASSVRGYELDSIGLAGPNGSVLPERALLTGSLEYQLPFTRTLSGAVFHDMGDA
                     AANFKRMELKHGSGLGVRWFSPLAPFSFDIAYGHSDKKIRWHISLGTRF"
     gene            6680..7909
                     /gene="sstT"
                     /locus_tag="WHR07_000857"
     CDS             6680..7909
                     /gene="sstT"
                     /locus_tag="WHR07_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HEZ2130093.1"
                     /translation="MAFGKSLFHAIGRVSLVRQIAAGLALGIVIGSVSPQLGLAAGLF
                     GSLFVGALKAVAPVLVFILVAATIAQHQKGNKAHIRPIIILYLIGTFSAALTAVIAGM
                     VFPTHIVLAGAGDVSAAPPSGIVEVLKSLLMNLVANPINAIANANYIGILAWALVLGA
                     ALRNHGSDVTRQVVADLAEAVSTVVKWIIRFAPLGIFGLVSSTIAETGFGALAGYAKL
                     LAVLLGCMAFIALAVNPAIVWWKIRRNPYPLVFTCLRESGVYAFFTRSSAANIPVNMA
                     LAKKLGLHEDTYSISIPLGATVNMGGAAITITVLAMAAAHTQGIQVDFATALLLSLVA
                     TVSACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVIQDSAETALNSSTD
                     VLFTAAADLGRQRNRAE"
     gene            8021..9304
                     /locus_tag="WHR07_000858"
     CDS             8021..9304
                     /locus_tag="WHR07_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ2130094.1"
                     /translation="MFERSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVAE
                     KETEVKEDAPQAGSQGQGAPSTQGSQDMAAVSAENTGNGGAATTDKPKNEDEGPQNDM
                     PQNSAESANQTGNNQPADSSDSAPASNPAPANGGSNFGRVDLANGVLIDGPSQNITLT
                     HCKGDSCNGDNLLDEEAPSKSEFENLNESERIEKYKKDGKSDKFTNLVATAVQANGTN
                     KYVIIYKDKSASSSSARFRRSARSRRSLPAEMPLIPVNQADTLIVDGEAVSLTGHSGN
                     IFAPEGNYRYLTYGAEKLPGGSYALRVQGEPAKGEMLAGTAVYNGEVLHFHTENGRPY
                     PTRGRFAAKVDFGSKSVDGIIDSGDDLHMGTQKFKAAIDGNGFKGTWTENGGGDVSGR
                     FYGPAGEEVAGKYSYRPTDAEKGGFGVFAGKKEQD"
     gene            complement(9380..9595)
                     /locus_tag="WHR07_000859"
     CDS             complement(9380..9595)
                     /locus_tag="WHR07_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130095.1"
                     /translation="MFKLGVYACLGLFAGWVLLLIVQLWFSFLEAELFFKITLTMAGL
                     FVIILAALLVFGQYFSEKKMKDDGFIN"
     gene            complement(9588..9803)
                     /locus_tag="WHR07_000860"
     CDS             complement(9588..9803)
                     /locus_tag="WHR07_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4177 domain-containing protein"
                     /protein_id="HEZ2130096.1"
                     /translation="MKEYKVVIYQESQLSSLFFGAAKVNPVNFSAFLNKQTPEGWRVV
                     TMEKDLRRMLLFFKREAYVVILERDRV"
     gene            complement(9878..11221)
                     /gene="argG"
                     /locus_tag="WHR07_000861"
     CDS             complement(9878..11221)
                     /gene="argG"
                     /locus_tag="WHR07_000861"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEZ2130097.1"
                     /translation="MSQNHTILQNLPVGQKVGIAFSGGLDTSAALLWMKLKGALPYAY
                     TANLGQPDEDDYNAIPKKAMEYGAENARLIDCRAQLAHEGIAAIQCGAFHVSTGGIAY
                     FNTTPLGRAVTGTMLVSAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPALKIYKPW
                     LDQQFIDELGGRHEMSEFLIANGFNYKMSVEKAYSTDSNMLGATHEAKDLEFLNSGIK
                     IVKPIMGVAFWDENVEVSPEEVSVRFEEGVPVALNGKEYADPVELFLEANRIGGRHGL
                     GMSDQIENRIIEAKSRGIYEAPGMALFHIAYERLVTGIHNEDTIEQYRINGLRLGRLL
                     YQGRWFDSQALMLRETAQRWVAKAVTGEVTLELRRGNDYSILNTESPNLTYQPERLSM
                     EKVEGAAFTPLDRIGQLTMRNLDITDTRAKLGIYSQSGLLSLGEGSVLPQLGNKK"
     gene            11346..12146
                     /locus_tag="WHR07_000862"
     CDS             11346..12146
                     /locus_tag="WHR07_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HEZ2130098.1"
                     /translation="MNAFNLIIIGDEILHGSRQDKHFAFFKSLLESKGLKLNQVQYLP
                     DEPDLLVRQLRRSFSDGIPTFVTGGIGATPDDHTRQAAAAALELPVVRHPEAAGFIEG
                     ITQKRGEPLDSPEHAQRLKMADFPEGAELVPNPFNNIAGFSIREHYFFPGFPVMAHPM
                     AEWVLDTYYAGRFNQTQRGSRSVYVFEQPESRITPIMEHIEQTYPGVRSYSLPSVGWT
                     HSDGTQVKPHIEFGIKAEGEAVNLLDAAWAEVLHSLDGLGAELKNRVN"
     gene            12186..13172
                     /locus_tag="WHR07_000863"
     CDS             12186..13172
                     /locus_tag="WHR07_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HEZ2130099.1"
                     /translation="MQYRIRRENEAPEAKNAGETLWERDMMREVLLSAYQDRRRERMW
                     KNIWRAVSTLILVALIAGIFQKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKD
                     GMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPDIPVYLVAEDMCASG
                     CYYIAAAADKIYADSSSIVGSIGVIGSSFDATELMEKIGVKRRVKIAGSNKGMGDPFS
                     PETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADALKVGLV
                     DGLGNIYSVARDVVKAPDVVDYTPKDDFGRILGRRFGAELKAGVREALQAVR"
     gene            13830..13952
                     /locus_tag="WHR07_000864"
                     /pseudo
     CDS             13830..13952
                     /locus_tag="WHR07_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805306.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT         2930 a         3569 c         4191 g         3262 t
ORIGIN      
        1 gtacggcgtt gccttgcctt agctcaaaga gaatcggttc cgtactattt gtactgtctg
       61 cggcttcgtc gccttatcct gatttttgtt aattcactat atcgattctg ttcccttgca
      121 ggcggacggc ggcggcggac ggtggaaaag caggttttca aatgtccggt ttggcggcgc
      181 gccgtctgaa aaccgcttat tttcctttgc cgtttccggc ggagtctttt ttgtccgaac
      241 cggagaagcg gtcgaaacgt atggtgtatg tcagctcgcc gcccgacgaa cggctaccga
      301 tacgggcaac cgcctgtatg gcgcgtgtca gccggtaaat cagtttgacg gactgttccg
      361 cgctggagat gctgtattcg tagccgatgt agagtttgcc ggtcagttgt ttgccgacgg
      421 tcagcacctg ttcggcgggg ttgagttcgc cggtttgcgc gttgcggctg cgcttgctgg
      481 taaagcccaa atcatccacc agcccgatgc ggtcgttgat ttgcccggca agcagcgcgc
      541 ctgcggctgc ggacagggcg gcattgtcgc cgctgctgcc actgccggcg cggttgagga
      601 tgagccagga gagcttgtct ttttcactca tcggttcgtt tgccgtcagc gtaatgcgcg
      661 gactgttgag gctgcccaat atttccacgc ccgcaccgac gggggaaagg cggcgttcgg
      721 cgcggatgtt gaggttgggg tcgttgagcg ggccgacaaa ggagaccgtg cctttggtaa
      781 tgtccaaatc ctgcccgtat gccttataac gccctttgat gacgcggacc gtgcccacgc
      841 cccgcacgct tccgcccgat tgggcggtca gggtcagttt gccgcctatg gtaacgtccg
      901 cgccgtagcc ggcgaagcgg atgccgtcat tgaggtctaa agtcaggttc atattgacgg
      961 ggagcggtgc cgccgcctct tttttaactt cgcctaatac gacgacatcg tcgccgacgg
     1021 acggcatcga ggatttttgc gaaccgaaca gcccctgatc cgttttaatc atcccggtaa
     1081 cggatatgcc tttttgcggc gaatagcgca ggcgggtgtt gccggaaacc gtcaggcggc
     1141 ggttagggcg ggacaggatg cggtatttgt cgaacaccgc gccgatatcg acatcgggtc
     1201 cgctgttttc cataccgacc gtgccggaga gttccgccgt tccttcgtgc cggaatttca
     1261 ggctgtcgat tacccatttt ctgcccgcga tatgcgaacg cagcgagccg ttgtccaaga
     1321 tgatgccttg ggtttggttg cggtaataga gcttgtcgcc gttgatgctg ccgcccaagt
     1381 gcgggtcggc gatgctgccg ccgagggtta cggcggcatt caggctgcct ttgacggttt
     1441 gtccgacggg caggaagttg cggaatactt cggcatcggc aacggtcagg ttgagcctgc
     1501 cgcccaaagg cgcggtatcg aaagagcggc tttgcccgac ggtgatgttg ccgttgattt
     1561 tcccgtagtt gctgctgccg ttgacggcgg cattgacgga cggagagccg acccgtccgc
     1621 cgatttgcgc ggcggcattc aggctgccgg taatgttttg cgcggcggcg ggcagaaagg
     1681 gcttcaatgt gcccaagtcg ggaagggagg cggtaatcct gccgccgagc ggtgcatttg
     1741 ccatattgcc gccgaaggcg ttgccgatgt ccaaatcggc gttaatccgc ccgaaacgtg
     1801 cgccgccgtc aagcaggatt ccgatacggt cgttttgaaa gcgcgttttc agggaaaatg
     1861 cgttcaaacc caaagcctgc ccgccgggca atacggcatc gccgctttgc cgattgatat
     1921 tgaggtagcc gcgcgcgttg cgcccgtagg cgacatccca gtcgccgttt aaaaccagat
     1981 tgtgttcgaa gggcggtttg aagaaattgt gcaactcggc gatatgcaga cctcgtgcgc
     2041 cgccttttgc cgatatgccg gttttcctgt cccaggaaaa gtgttgcagg ttgaggctgc
     2101 cgcccatagc ctgccaattt gccgcacttg ccgccacacg ttccgcaccg gcttcgagcg
     2161 tcatacggtt ttgcagtttt aggttgaatg cgccgccgat gtcgagaatg ccgatgctgc
     2221 ccttccatag ggtaagttcc ctgttgatgc cgcctgaagc gtccaaatcg aatttgaacg
     2281 gtttgccatc cagcgtcatg gcggcgtgtg tgcggatgcg gtgctgcacg cccgtgccgt
     2341 ccagcatcag gtcggcggta tcgacaaccg ccgctccgcc cgacagcgaa aggcggctgc
     2401 ctttgatgtc ggcgcgtatc gggcggcttg tgtcgggcga acctttgagc gtgaaatcga
     2461 gcgaacggat gtctgccgcc ttgccgatgt gcaggttgcg cgccgcgccg gaaaggtcgg
     2521 tttcaaaggt tcggatgccg ccgtccaaat cgccggaaag gtgtccgcgt acatttaaag
     2581 accccgcgag tccgaaaccg aaacgggata aatcgggtgc ggtgatgttg aggttgagcc
     2641 ggtcgccttt tttgccgaag ccgccgtctg ttttaataat gttccgcccc agccgcaaat
     2701 cgacggcggc acgcggaagg tggcgggact cgtaaacaat gtcggcactg ccggcaatcg
     2761 gtacgccgtt gaacgtgccg ggtaaaaacc gcattttgcc tgtgaatttc tcttttgcca
     2821 gttcgccggc aaggtttatt gagccgttga tattgcctgc cggaagttgc ggattgatgc
     2881 gcgaagggtc gaatgcgcgg gaacggatgt ccagcttgag caggcggtct ttaaacagct
     2941 cgagatagcc ttgcgcggtc aggctgcctt gcccggcggc gatgttgacg gtgtcgagca
     3001 ccagtttccg ctgtccgttt gcggggtcgc ttgcaatggc gaggctgccg tccgtgcgcg
     3061 ccgtgccgat gccgagttgc caagagattt tgggcgaggc ggtcgtgcca ccgatgccga
     3121 tgctgccgtc caacctgcct ttgaacgcgg tttgcagtac gtcttccgcg ccgacggagt
     3181 tgatgcctat atttaaatcg aggatgtctt tttcggtgtc gattttgccc gacagcctga
     3241 tgccgccccg tccgagcagg gcggcggacg tattgccgat atgcaccgtg ccgtcctgcc
     3301 ggatgacaaa gccgcctaaa acctgacgga cggggatgcc gttgcggtcg gcaaagccgg
     3361 ctttggtgtt ttccaaatcg agcgaacctt ccagcgcgat gccgtctgaa aacgacggga
     3421 tggcggtcag gtcgaaattc agcccggcat cgggcaggga gggcacgaag gcggccgggt
     3481 tgatgttgaa ccctttgacc agcacttctt ccaatgtttt atccaatgat tcggcaaacg
     3541 ggtggatgac ggattttccc gagaggcgga tattgccgcc gtcgatcgcc agttcggcgc
     3601 gcacatcctt caggctgccg ctcagccgcg ccgtactgtg tatggttttg ccttcgagtc
     3661 cgcctttggt gtaaatggcg gtatcgaggg caaacggttt tttcaagccg accgaggctg
     3721 accccgacga actgctccac ggcgtgtcgg cggccttcag gtcgaggcgg tgtcctttgc
     3781 ggtcgtaacg gtatgaagca tccagccgtt cgagatagac ggtttgtttg tcaaaggctt
     3841 tgcccatgct gattttgccc gtctcgaagc ggtcgagata gacggcggca ggcgggtcta
     3901 tgctgtcggg aaggctgagc ggagggcgtt cttctttagg cggagtcggt ttggtaacga
     3961 tggcgatgtc gccggcggaa atttcggtaa tgtgcaggct gcggcgcatc agttcggacg
     4021 gtttccacgc gaagcggaag cggctgattt taaggtctgc cccctcggtt tctatcgacc
     4081 agttgtcgcc gtcgaagccg tcgagcagcg tgcctttgag gttttgggag gaaatgttta
     4141 cgccgaacca agacgggatt tggtacagcc cgaagcgcaa acccgcttcc gtgccggcga
     4201 gccagccgag gaaacatact gccaaaatca ggacagacag cagtgccgcc gacagcttca
     4261 gcagcgggcg gcgttttttt gccggcgggg tggggcggtg ttcagacggc attttgcgcg
     4321 tgccgttttc ggtcggatcg gtatctgtcg gtgcggtatc ggtcataatg tctgtttcaa
     4381 aatagtttgc tgcaatgccg tctgaagcgg ccgtatcggt ttagaagcgt gttcccaagc
     4441 tgatgtgcca gcggattttc ttatcgctgt gcccgtaggc gatgtcgaag gaaaacggcg
     4501 cgagcgggct gaaccagcgc acgcccagtc ccgaaccgtg tttcagctcc atacgtttga
     4561 aattggcggc ggcatcgccc atatcgtgga ataccgcgcc ggaaagggtg cgcgtaaacg
     4621 gcagttggta ttccaggctg cccgtcaaga gggcgcgttc gggcaggacc gatccgttcg
     4681 ggccggcaag cccgatgctg tcgagttcgt aaccgcgcac ggaagacgcg ccgccgctgc
     4741 ggaacatcaa ccccgaagga acgtcggcat tgtcgcgggc aacggtgtaa cctgcttgtc
     4801 cgcgtatgat gaacgtgccg agttttttgt tttcgggcgt gaagaaataa cctgcgcggg
     4861 cagaggtgcg gatcagcgcg gtggaggaca ggaatgtgcc caaagtcgta ccgattttgc
     4921 cgtcgaggta atggccgttt tcgggatgca gcacgttgtt gagcagctgg cgtttccaag
     4981 aggcggtcag catcgtggcg tggctgttgc ccaaatcgac atccgagccg gggattttcc
     5041 ggccttctgc gagaaactcc gcccccagcc tggcatcgat gcccgcgcgg tcgcgcacat
     5101 accagatgcc gccggagaag gcgcgttttt cgaggttttg ggtggtcgaa cggttgtagg
     5161 agacgttgct tgtccagtag ttgccccgat agttgcgcgg ctggctgatg ccggcggcaa
     5221 gcgtggtttc gtatttgtcc atatcccaga cgaccgaacc gatatagcct ttgttgaaga
     5281 ggttgtaata gtcgtaggcg attttgccgc ccaaaccgta ttccgaatcg aggcggatgc
     5341 cggtttcgag tttgtggcgt ttgacctcgg ttacgctgac tttgacgggg acgcggtcgc
     5401 cttggaggcg gtcgaagtcg gcttgtacgg acgcgccgga ataatgcccg ttttgttcga
     5461 gcgcctgttg gaagtcgagc agcaggtcga ggtcgtaggg cgtgcccggt tggaagcgcg
     5521 ccaggccgga gacgatttgt tcggggtaac gctgtgtgcc ggtgatttca aagtcgccga
     5581 aggcgatggg gcggccgctg tccacgacga cgttcaaatc ggcggtggcg gtatcggggt
     5641 tgacggccgc ccgggtgttg ccgagcttgg caagcgggta ggctttgcgc gttaccgcgc
     5701 cgaggacgga agttttgctg ttttcccaac tgtcctgatc gaaatcgctg cctaccggct
     5761 gctgccagtt ttccagcgcg ttgcggtagt attcggcgag gttgccgtct gaaaggatgt
     5821 cgccgaggat ggtgacgccg acgttggtga ttttggtgcg cggccccggt gtgatgtgca
     5881 ccgtataagc cccgcctttt tccgtcaggc tgactttgct gctgaaataa cctttgctgc
     5941 ggagcatcgt tttaacgttg tccggtgctt cttcggcgag gaagcctgtc tgttccttgt
     6001 ccaatacttc ttcctgctgc tgcgtgatga gcggcaggtg ttcttcgacc atatctttga
     6061 tttcactgtc ctgcgtgtcg atgcggacgg ggaatttggg ttttaatttg actgattcgg
     6121 tgtcggggct tttgtttttg aacaatgcga aacccgccgc cttgttttcg gaaaggtcgg
     6181 cggcaggcgc gtatgcgtgc ggaaagaaaa ataaagccgg caggagcagg gcggtcggtt
     6241 tgatcatcat ggtacgggtg tcgtgcatcg gtgtggcaga tttcgattct aacactgttc
     6301 ggacagggtt tcgaacggct gtttttgtgt tgttcggacg gggcgggaca cttcagacgg
     6361 catactgccg ccggtatttc ggaggttgcg gcccgccgga aatgtatctg cttgttttaa
     6421 ggtattttgt ttccaatccg catatggaaa acaggctgcg tttcggaata gtgccggaaa
     6481 ataggcagga ttaaataaat ttattttcgt tcaataaatt aaaccgttgc gccgaatgat
     6541 aaagcaaagc ctgtccggca ctgcataggg caaatcaacg caaccttaaa acacagccga
     6601 aaaataaaaa aaaacacaga gaatgagttt tcttttaaaa tacaacattt tttaacatat
     6661 cacaacataa ggaagaatta tggcgttcgg caaatcctta tttcatgcga tcggccgcgt
     6721 cagcctggtc aggcagattg ccgccggttt ggcgttgggc atcgtaatcg gttcggtttc
     6781 cccgcaactg ggcttggcgg caggcttgtt cggcagcctg tttgtcggcg cgctcaaagc
     6841 ggtcgcgccg gttttggtat ttattttggt ggcggccaca atcgcgcagc accaaaaagg
     6901 caacaaggcg catatcaggc cgattatcat cctttacctc atcggtacgt tttccgcagc
     6961 cctgaccgcc gtcatcgccg gtatggtttt cccgacgcac attgttttgg cgggcgcggg
     7021 cgatgtgtcc gccgcgccgc cttccggcat tgtggaagta ttgaaatcgc tgctgatgaa
     7081 cctggtcgcc aacccgatta acgcgattgc caatgccaac tatatcggca ttttggcttg
     7141 ggctttggtt ttgggcgcgg cgttgcggaa tcacggttcg gacgttacgc ggcaggtcgt
     7201 tgccgatttg gcggaagcgg tttccaccgt cgtgaaatgg attatccgtt ttgccccttt
     7261 gggcattttc gggctggtgt cgtccacaat cgcggagacg ggtttcggcg cgctggcggg
     7321 gtacgcgaag ctgcttgcag tgctgttggg ctgtatggcg tttatcgcgc tggcggtcaa
     7381 tcccgccatc gtgtggtgga aaatccgccg caacccttat ccgctggtgt tcacctgcct
     7441 gcgcgaaagc ggcgtgtatg ccttctttac ccgttcttcc gccgccaata tccccgtgaa
     7501 tatggctttg gcgaaaaaac tggggctgca cgaagacact tattcgattt ccatcccgtt
     7561 gggggcgacc gtcaatatgg gcggcgcggc gattacgatt accgttttgg ctatggcggc
     7621 ggcgcacacc caaggcatac aggttgattt tgccaccgcg ctgctgttga gcctggtggc
     7681 gacggtcagc gcgtgcggcg cgtccggcgt ggcgggcggt tcgctgctgc tgattccgct
     7741 ggcgtgcagc ctgttcggca tcagcaacga tgtcgccatg caggtggttg ccgtcggctt
     7801 tatcatcggc gtgattcagg attcggcgga aacggcgttg aattcttcaa ccgatgtttt
     7861 gtttaccgct gccgccgatt tgggccgaca gagaaaccgg gcggaataaa ccaagctatg
     7921 ccgtctgaag cccgtttggc gttcagacgg catattttta caattttatg ggcatatggc
     7981 ggaaacaata ccggctgcct tgaatatgaa ggggatgatg atgtttgaac gcagtgtgat
     8041 tgcaatggct tgtatttttg ccctttcagc ctgtgggggc ggcggtggcg gatcgcccga
     8101 tgttaaatcg gcggacacgc tgtcaaaacc ggccgctcct gttgttgctg aaaaagagac
     8161 agaggtaaaa gaagatgcgc cacaggcagg ttctcaagga cagggcgcgc catccacaca
     8221 aggcagccaa gatatggcgg cagtttcggc agaaaataca ggcaatggcg gtgcggcaac
     8281 aacggacaaa cccaaaaatg aagacgaggg accgcaaaat gatatgccgc aaaattccgc
     8341 cgaatccgca aatcaaacag ggaacaacca acccgccgat tcttcagatt ccgcccccgc
     8401 gtcaaaccct gcacctgcga atggcggtag caattttgga agggttgatt tggctaatgg
     8461 cgttttgatt gatgggccgt cgcaaaatat aacgttgacc cactgtaaag gcgattcttg
     8521 taatggtgat aatttattgg atgaagaagc accgtcaaaa tcagaatttg aaaatttaaa
     8581 tgagtctgaa cgaattgaga aatataagaa agatgggaaa agcgataaat ttactaattt
     8641 ggttgcgaca gcagttcaag ctaatggaac taacaaatat gtcatcattt ataaagacaa
     8701 gtccgcttca tcttcatctg cgcgattcag gcgttctgca cggtcgagga ggtcgcttcc
     8761 tgccgagatg ccgctaatcc ccgtcaatca ggcggatacg ctgattgtcg atggggaagc
     8821 ggtcagcctg acggggcatt ccggcaatat cttcgcgccc gaagggaatt accggtatct
     8881 gacttacggg gcggaaaaat tgcccggcgg atcgtatgcc ctccgtgtgc aaggcgaacc
     8941 ggcaaaaggc gaaatgcttg ctggcacggc cgtgtacaac ggcgaagtgc tgcattttca
     9001 tacggaaaac ggccgtccgt acccgactag aggcaggttt gccgcaaaag tcgatttcgg
     9061 cagcaaatct gtggacggca ttatcgacag cggcgatgat ttgcatatgg gtacgcaaaa
     9121 attcaaagcc gccatcgatg gaaacggctt taaggggact tggacggaaa atggcggcgg
     9181 ggatgtttcc ggaaggtttt acggcccggc cggcgaggaa gtggcgggaa aatacagcta
     9241 tcgcccgaca gatgcggaaa agggcggatt cggcgtgttt gccggcaaaa aagagcagga
     9301 ttgatgctga tgctgtctga agcgggggcg ttcagacggc attgtgatgt ttgggttgcg
     9361 ggtccggttc aagtccgcat cagttgataa acccgtcgtc tttcattttc ttttcggaaa
     9421 aatactggcc gaataccagc aaggcggcga ggatgatgac aaacagcccc gccatagtca
     9481 gtgtgatttt gaagaacaat tccgcttcga gaaaagaaaa ccaaagttgc acaatcagca
     9541 gcagcaccca gccggcaaac agtccgagac aggcataaac gccaagctta aacacggtcc
     9601 cgctccaaaa tgacgacgta ggcctcgcgt ttgaaaaaca acagcatacg gcgcaaatct
     9661 ttttccatcg ttacaacccg ccagccttcg ggggtttgtt tgttgaggaa cgcgctgaaa
     9721 ttgacggggt tgacctttgc cgcgccgaaa aacaggctgg acaactggct ttcctgataa
     9781 atgacgactt tgtattcttt cataggattc cttttaacat aagggatcat cttttcagac
     9841 gaccccttaa gttgctaatg atgcaaaaca gcaaacctta tttcttattg cccaactgcg
     9901 gtaataccga gccttcgccc agcgacagca aaccgctttg cgagtagatg cccagtttgg
     9961 cgcgggtgtc ggtgatgtcg aggttgcgca tcgtgagctg tccgatgcgg tcgagcgggg
    10021 taaacgccgc accttcgact ttttccatac tcaggcgttc gggttggtag gtcaggttgg
    10081 gcgattcggt gttcagaatc gagtagtcgt tgccgcgccg cagttcgagg gtaacttcgc
    10141 cggtaacggc tttggcgacc cagcgttggg cggtttcgcg caacatcaag gcttggctgt
    10201 cgaaccagcg gccttggtag agcaaacggc cgaggcgcag gccgttgatg cggtattgtt
    10261 cgatggtgtc ttcgttgtgg atgccggtca ccaagcgttc gtaggcgatg tggaacaacg
    10321 ccatacccgg ggcttcgtag atgccgcgcg atttggcttc gatgatgcgg ttttcgattt
    10381 ggtcgctcat acccaagccg tggcggccgc cgatgcggtt ggcttcgagg aagagttcga
    10441 cggggtcggc gtattctttg ccgttcagtg caaccggcac gccttcttca aagcgcacgc
    10501 tgacttcttc ggggctgact tcaacgtttt cgtcccaaaa ggcaacgccc ataatgggtt
    10561 tgacgatttt gatgcccgag ttcaaaaatt ccaagtcttt ggcttcgtgg gtcgcgccga
    10621 gcatattgga atcggtggag taggcttttt caaccgacat tttgtagttg aagccgttgg
    10681 caatcagaaa ttcgctcatt tcgtgacggc cgccgagttc gtcgataaat tgctggtcga
    10741 gccagggttt gtagattttc agcgcgggat tggtgagcaa accgtagcgg tagaaacgct
    10801 cgatgtcgtt gcctttgtag gtgctgccgt cgccccagat gtttacgtcg tcttctttca
    10861 ttgcggaaac aagcatcgtg ccggttacgg cgcggcccag aggcgtggtg ttgaaatagg
    10921 cgatgccgcc ggtggaaacg tggaacgcgc cgcattggat ggcggcgatg ccttcgtgtg
    10981 ccaactgcgc gcggcagtcg attaagcggg cgttttccgc accgtattcc atcgcttttt
    11041 tgggaatggc gttgtagtcg tcttcatcgg gctgaccgag gttggcagtg taggcataag
    11101 gcagtgcgcc tttgagtttc atccacaaca gcgcggcgga ggtatcaagt ccgccggaga
    11161 aggcgatgcc gactttctga ccgacgggga ggttttgtaa aatagtatgg ttttggctca
    11221 tgaaaaaatc ctcggtagct tgaaaaatca aagccattat cttataaata ggaaatattg
    11281 tcagccatca tgccgtctga acgggtattc cgccgtttca ggcggtattt aaaaccgaaa
    11341 acattatgaa tgcgttcaac ctcatcatca tcggcgacga aatcttacac ggcagccgcc
    11401 aagacaagca tttcgccttt ttcaaatccc tgctcgaatc caaagggctg aagctcaatc
    11461 aggtgcaata tctgcccgac gaacccgatt tgctggtcag gcaactgcgc cgcagctttt
    11521 cagacggcat accgacgttt gttaccggcg gcatcggcgc cacgcccgac gatcataccc
    11581 gccaagcggc cgccgccgct ttggagttgc ccgtcgtccg ccatcctgaa gccgccgggt
    11641 ttatcgaagg cataacccag aaacgcggcg agccgcttga ttcgccggaa cacgcccaac
    11701 gcctgaaaat ggcagatttc cccgaaggcg cggaattggt gcccaatccg tttaataata
    11761 tcgccggatt ttccattcgc gagcattatt tcttccctgg ttttcctgtg atggcgcacc
    11821 cgatggcgga atgggttttg gatacttatt acgccggccg cttcaaccaa acccaacgcg
    11881 gcagccgcag cgtgtatgtg ttcgagcagc ccgaatcgcg cattacgccg attatggagc
    11941 atatcgagca aacttatccc ggcgtgcgtt cgtacagcct gcccagcgtc ggttggacgc
    12001 attcagacgg cacgcaggtc aaaccgcaca ttgagttcgg catcaaagcc gaaggagaag
    12061 ccgtcaacct tttggacgcg gcgtgggcgg aagtgttgca cagcttggac ggattgggag
    12121 cagagctgaa aaatcgggta aactgaaaac cgtttgccca aatcggacga tatttaagga
    12181 aaaccatgca ataccgaatc agaagagaaa acgaagcacc cgaagcaaaa aatgcggggg
    12241 aaaccttatg ggagcgcgat atgatgcgcg aagtgctgtt gtccgcctat caggacaggc
    12301 gcagggagcg gatgtggaaa aacatctggc gcgccgtcag caccctgatt ctggttgccc
    12361 tgattgcagg cattttccaa aaagacgaag ccgcattgca gttggcgggc aacacgccgc
    12421 ataccgcagt cgtcaacctg tacggcgaaa tcggcaacgg tgtagaagac caggtcaaaa
    12481 aactcaaaga cggtatggag gccgcctaca aaaacccgca ggcaaaagcc atcgtcatcc
    12541 gcgccaacag ccccggcggt tcgcccgtcg tctccaacac cgcttttgaa gaaatacgcc
    12601 gtctgaaagc gcaacatccc gacattcccg tttatctcgt ggcggaggat atgtgtgcat
    12661 ccggctgcta ctatattgcg gcggcggcag acaaaattta tgcggactcg tccagcatcg
    12721 tcggcagcat cggcgttatc ggcagcagtt ttgatgctac tgaattaatg gaaaaaatcg
    12781 gcgtgaaacg cagggttaaa attgcaggca gcaacaaagg catgggcgat ccgttttcgc
    12841 ccgaaacgcc cgaacagtcg aaaatctggg aagaaatgct gaccggcata cacggcgagt
    12901 tcatcaaagc cgtcaaaacc ggacgcggcg gccgcctcaa attccgacaa tatcccgacg
    12961 tgttcagcgg tcgcgtgtac acaggcgcgg atgcgctgaa agtcgggctg gtggacggac
    13021 tcggcaatat ttacagcgtg gcgcgagacg tggtcaaagc ccccgatgtg gtggattaca
    13081 ctccgaagga cgatttcggc agaatcttgg gcagacgctt cggcgcagaa ctcaaagccg
    13141 gcgtgcgcga agccctgcag gccgtccggt agcgttgttt acagtatttc taagggaata
    13201 ccaaaataaa aatatacaca aaaacactca cctccccagt atgctgccac taagtcagcc
    13261 gcgtcactat ttaccgtgca cttaaagccg taaaaggcag gttgtccccg ggaggttttg
    13321 tgcatcctga taccgatcgg ttgttgttgc tcaaaggaca gaaggccgct gataaacgag
    13381 attacctgtt tgtcgctatt gacgattttt atactctgcc actttgccgg acaaaaccgc
    13441 agacagtgct gccaagtttc tgaccgaaca tctggccgac ccctgcttgt acctgattga
    13501 gtacgtttac tctgacaatg ataggtaata taaagagccg tccaacatgc tttcggtgca
    13561 gcttgttatg ataatgggat tggttggagg cttgcccgat ttgcttgtcc gcagaccaac
    13621 ggtaaggcgg agcgggttat ccgtaccttg atggagatgt ggcatgagga acagtcgttt
    13681 gacagtccgg aacatcggca aaaggagttg tgctgcttta ttaatttagg ggctgcccta
    13741 gatcactagg gaaattcaaa ttaagttaga attatcccta tgagagaaag tcgtctaagc
    13801 cggtaataaa caaaataaac tcattttgtt atcgtggcta tgatgtattg gatgcgggcg
    13861 aatttagcca tttccgtatc aatcacagca cacattttgc cgaacgacaa aaccatatta
    13921 atggaactga gaacttttgg aatcaagcaa aa
//
LOCUS       DAWGKF010000042        13568 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.042, whole genome shotgun sequence.
ACCESSION   DAWGKF010000042 DAWGKF010000000
VERSION     DAWGKF010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13568)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13568)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13568
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.042"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(77..152)
                     /locus_tag="WHR07_000865"
     tRNA            complement(77..152)
                     /locus_tag="WHR07_000865"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(117..119),aa:Asn,seq:gtt)
     gene            complement(343..1095)
                     /locus_tag="WHR07_000866"
     CDS             complement(343..1095)
                     /locus_tag="WHR07_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEZ2130100.1"
                     /translation="MITLPSLNNLPSKWDEIRHCLETRVFECGVMPHPNLTECEAGQF
                     DRDFWDNTGCAPEEYVRIRRAIRLLEVRYPDSLNELVCAAIATPLGEMLAVFGNKGLC
                     LLEFVGQKHLEQEIAAVQKALRGRFVFREDERTQLLRQELDLYFKGRLKTFATPLEQI
                     GTEFQKQAWDALLAIPYGETRSYKEQAQRLGNPKAVRAVAAANGQNKVSILIPCHRVI
                     GSDGKLTGYAGGLNRKQFLLALERGEVQTALF"
     gene            1406..1930
                     /locus_tag="WHR07_000867"
     CDS             1406..1930
                     /locus_tag="WHR07_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HEZ2130101.1"
                     /translation="MQTRILSAVLLAFSTAAFAGGAFTLQFDNPSEDGGFTQNQLLSA
                     PYGFGCSGGNAPPALSWKNPPAGTKSFVLTVYDKDAPTGLGWMHWVVADIPADVRRRN
                     AASLQLSRCANIADDQSAAISAVISLRICRIRLTPSYTAKPMPSCCNHANTPQSAASA
                     TLCGTFSSASTAAA"
     gene            complement(2019..2298)
                     /locus_tag="WHR07_000868"
                     /pseudo
     CDS             complement(2019..2298)
                     /locus_tag="WHR07_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246300.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
     gene            complement(2670..3815)
                     /gene="dapE"
                     /locus_tag="WHR07_000869"
     CDS             complement(2670..3815)
                     /gene="dapE"
                     /locus_tag="WHR07_000869"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HEZ2130102.1"
                     /translation="MTETQSLELAKELISRPSVTPDDQNCQKLLAERLHKIGFAAEEL
                     HFGDTKNIWLRRGTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADM
                     KTSIACFVTACERFVAEHPDHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYC
                     IVGEPTAVDKLGDMIKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQ
                     EVWDEGNKYFPPTSFQISNINGGTGATNVIPGELSVKFNFRFSTESTEAGLKQRVHAI
                     LDKHGVQYDLQWSCSGQPFLTQAGKLTDVARAAIAETCGIEAELSTTGGTSDGRFIKA
                     IAKELIELGPSNATIHQINENVRLDDIPKLSAVYEGILARLLAGNAV"
     gene            complement(3929..4549)
                     /locus_tag="WHR07_000870"
     CDS             complement(3929..4549)
                     /locus_tag="WHR07_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diadenosine tetraphosphatase"
                     /protein_id="HEZ2130103.1"
                     /translation="MLTPKSCDLFNIPFFQFAQLKKYRPESIPQIKADYKENWQIWQQ
                     LIQQVAAELGAPFAPPHIERWCNGWQVRAHFFAYFKYAQYKNSAAILSILLNRRRLSV
                     SLDWHCYKADVSPITLPDYNRWLDNFDTEKYASFDMWHGAESEYDDYRTVAQQNESDR
                     RLQNDEDFFCIGKHIERDDLGRQDVAKWIAETVEDLLPLYEACHGK"
     gene            complement(4583..5092)
                     /locus_tag="WHR07_000871"
     CDS             complement(4583..5092)
                     /locus_tag="WHR07_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEZ2130104.1"
                     /translation="MNPFETKSVTFAEPIEMLYACHGKVRRFCGQVAMLSDYIAENGC
                     NQIVLQTIRQIAQYFNVAAPLHHEDEEENFFPLLLQYAPQAQESVDELLRQHIGLHDN
                     WAAVSAEFAKLEADNAYVPDEEAFKRFVAGYDVHLAIEEPLFDMGNTFIPKEKLTEIG
                     EIMAARRRK"
     gene            complement(5187..5738)
                     /gene="azu"
                     /locus_tag="WHR07_000872"
     CDS             complement(5187..5738)
                     /gene="azu"
                     /locus_tag="WHR07_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="azurin"
                     /protein_id="HEZ2130105.1"
                     /translation="MKAYLALISAAVIGLAACSQEPAAPAAEATPAAEAPASEAPAAE
                     AAPADAAEAPAAGNCAATVESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGH
                     NLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTLDPAKLADG
                     EYKFACTFPGHGALMNGKVTLVD"
     gene            complement(6019..6441)
                     /locus_tag="WHR07_000873"
     CDS             complement(6019..6441)
                     /locus_tag="WHR07_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HEZ2130106.1"
                     /translation="MNLEQLGRRDALLSGLLKQAGQWRRLDAAVKKLLPANLHPHFQT
                     ACIEDGRLVLLAANNMAASRLKMIAPSVLPQLAGLDASIRSVSVRLAPKPEKPPKTNT
                     LHLSKAALESFGSAAVKLEKRHPELAEALANLVRRHGA"
     gene            6572..9322
                     /gene="secA"
                     /locus_tag="WHR07_000874"
     CDS             6572..9322
                     /gene="secA"
                     /locus_tag="WHR07_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEZ2130107.1"
                     /translation="MLTNIAKKIFGSRNDRLLKQYRKSVARINALEEQMQALSDADLQ
                     AKTAEFKQRLADGQTLDGILPEAFAVCREASRRTLGMRHFDVQLIGGMVLHDGKIAEM
                     RTGEGKTLVATLAVYLNALAGKGVHVVTVNDYLASRDAGIMEPLYNFLGLTVGVIISD
                     MQPFDRQNAYAADITYGTNNEFGFDYLRDNMVTDQYDKVQRELNFAVVDEVDSILIDE
                     ARTPLIISGQADDNIQLYQIMNTVPPHLVRQETEEGEGDYWVDEKAHQVILSEAGHEH
                     AEQILTQMGLLAENDSLYSAANIALMHHLMAALRAHSLFHKDQHYVIQDGEIVIVDEF
                     TGRLMSGRRWSEGLHQAVEAKEGVEIKRENQTLASITFQNYFRLYTKLSGMTGTADTE
                     AFEFQSIYNLETVIIPTNRPVQRKDFNDQIFRSAEEKFEAVVKDIEECHKRGQPVLVG
                     TTSIENSELVSHLLQKAGLPHNVLNAKEHEREALIVAQAGKVGAITVATNMAGRGTDI
                     VLGGNLKHQTDAIRADETLSDEEKQAQIAALENGWQAEHDKVMEAGGLHIIGTERHES
                     RRIDNQLRGRSGRQGDPGSSRFYLSFEDPLLRLFALDRAAAILNRLAPERGVAIEHNL
                     LTRQIEGAQRKVEGRNFDMRKQVLEYDDVANEQRKVIYSQRNEILTSKDISDLMQEIR
                     SDVVSDLVDTYMPPDSMEEQWDIPTLENRLAAEFRLHEDIQSWLKADNAIDGQDIKER
                     LIERIENEYAAKTELVGKQAMADFERNVMLQVIDNQWREHLAAMDYLRQGIHLRSYAQ
                     KNPKQEYKREAFTMFQDLWNGIKFHIASLLTSVQIEQNPVAVVEEQPIGNIQSIHSES
                     PDMEELLGQSQTDLVTEAFNPDGTDFSPEALEARGQIVHRNDPCPCGSGLKYKQCHGK
                     LA"
     gene            9337..9489
                     /locus_tag="WHR07_000875"
     CDS             9337..9489
                     /locus_tag="WHR07_000875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130108.1"
                     /translation="MPSEHPAPVSDGILPEPPHPTAIPKNPDFVPSVPKTDIPSAPHH
                     DSIRLH"
     gene            9467..11239
                     /locus_tag="WHR07_000876"
     CDS             9467..11239
                     /locus_tag="WHR07_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEZ2130109.1"
                     /translation="MIPSDFIDELLAKTDIVDIIDEQVPLKKGGANYMACCPFHKEKT
                     PSFSVSPTKQFYHCFSCGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMVVPKVRGQND
                     NPEVRAERKKKQQTLEETTAAAADFYAQQLKFNPAAKAYLDKRGLSAEVIAHYGLGYA
                     PDGWQPLAQVFQPYPNTALVDTGMVIDNEGRYYDRFRHRIMFPIRNPRGQVIGFGGRV
                     LDDSKPKYLNSPDTPLFDKGKNLYGLYEGRAAVKEAERILVVEGYMDVVALAQFGVGY
                     GVAALGTATTAEHVKILMRQADSIYFCFDGDSAGRKAAWRALENALPQLKDDKSLHFL
                     FLPEEHDPDSYIRAYGKAQFEDALLNQSKPLSEYFWEHLSDGIHLNTQEGKAELVKTS
                     SPLLAQITAPALAYLLKQRLSELVGIDPDNLAQLLGQEAPKRHVKQKNYKLPPISVKQ
                     PVMLTLVQRQIRSLLINPDWAAYIDLPDYLALDGDFACLANLAESIKNHAAVPETAQV
                     LEYMRGSPYEETITRIFHSTHQSEEMNSSSEEDCENFQIGMKKLLNELKYSQIEALKQ
                     KSLQSGLNESEKKLLLSLLTAKQN"
     gene            11427..13355
                     /gene="rpoD"
                     /locus_tag="WHR07_000877"
     CDS             11427..13355
                     /gene="rpoD"
                     /locus_tag="WHR07_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HEZ2130110.1"
                     /translation="MSKNQNHEEYQDDARPLTIEEQRARLRQLIIMGKERGYITYSEI
                     NDALPDDMSDADQIDNIVSMISGLGIQVTEHAPDAEDILLSDNAAVTDDDAVEEAEAA
                     LSSADSEFGRTTDPVRMYMREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSI
                     AEILELIEKIRKDEIRVDEVVEAIIDPNEVLLNELGLGHLETTAPEKPSNDNSDENED
                     DEESEEDADEISAANLAELKQKVIGHFAQIEKDYKKMIGRLEKHHSRHKDYLAYRDAI
                     ANKLLEVRFATRQIDSLSSSLRGKVENIRKLEREIRDICLDRVHMERDYFIQNFLPEI
                     TNLEWIEEEIAKGRVWSDALDRFRHAILEKQTELADMEKETRISIEELKEINKNMVSS
                     EKETAAAKQEMIQANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYK
                     FSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQETGEEPDSAKLA
                     ELMQMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDANNVAPADAAMYTSLHE
                     VTKEILESLTPREAKVLRMRFGIDMNTDHTLEEVGRQFDVTRERIRQIEAKALRKLRH
                     PTRSDRLRSFLDSEDSKL"
BASE COUNT         3466 a         3847 c         3345 g         2910 t
ORIGIN      
        1 ctatcttgcc gcattccgaa cgccgtacgt gcaaatatga aaaagcccga acattcaagt
       61 tcgggcttca aaattctggc tccccgacct gggctcgaac cagggacctg cggattaaca
      121 gtccgtcgct ctaccgactg agctatcggg gaatggggtg tattatagcg tccgaaaaaa
      181 atgtgtcaat ccttaatttt ggaaaaatgg gcgacaaaac gacaagcata tgaatcagaa
      241 agacattaag accgatgcct taaaaggatt gccgttgtat gaatttccac agccgtcatc
      301 acaccatatt taagcccgat gagccgttct gccctccccc gcttaaaaca atgccgtctg
      361 aacttcgccg cgttccaaag ccagtaaaaa ctgtttgcgg ttcaacccgc ccgcgtagcc
      421 ggtcagtttg ccgtcgctgc cgatgacgcg gtggcaggga atcaggatag atactttgtt
      481 ctgcccgttg gcggcggcaa cggcgcggac ggctttgggg ttgcccaaac gctgcgcctg
      541 ctccttgtag ctgcgcgttt cgccgtaagg aatcgccaag agcgcgtccc atgcctgctt
      601 ttgaaactcg gtgccaatct gctccaaagg cgtggcaaag gttttcagac gacccttgaa
      661 gtataagtcc aattcctgcc gcaaaagttg cgtccgctca tcctcccgaa acacaaaccg
      721 tccgcgcaag gctttttgga cggcggcaat ttcctgttcc aaatgcttct gtccgacaaa
      781 ctccagcaga cacaatccct tatttccgaa caccgccagc atctcgccca aaggcgtggc
      841 aatggcggca cacaccagct cgttcaagct gtcgggataa cgcacttcca acagacggat
      901 ggctcggcgg atacggacat attcttcagg cgcgcagccg gtattgtccc aaaaatcccg
      961 atcgaactgc ccggcttcgc attccgtcag attgggatgc ggcataacgc cgcactcaaa
     1021 aacccgggtt tcgaggcaat ggcggatttc atcccatttt gacggcagat tgtttaagga
     1081 aggcagggta atcattcgtt tgctccgtat ctctatcatg gatttggcgg caaaatcccc
     1141 aattctcgtc attcccgcac gccgatgcag gaacgggcta tgacgtaaat cttgagggtt
     1201 gggttgcggc aatgcctaaa tatgcgatat ttctaaagcc tcagggaaag gaattaaaga
     1261 cttcagacga cctgcaaagg gtcgtctgaa accacgattt ttgcatttac gcattccggc
     1321 acatcatcca accgtttcgg cacattcctg ccgccgttga cagcctataa tgaatccact
     1381 tattcatcaa gcaaaggaat catctatgca aacccgcatc ctctccgccg tactgctggc
     1441 tttttcaacc gctgcctttg ccgggggcgc attcacgctg caattcgaca acccgtccga
     1501 agacggcggc ttcacgcaaa accagctttt gagtgcgcct tacggcttcg gctgttcggg
     1561 cggcaatgct ccgcccgcgc tgtcgtggaa aaatccgccc gccgggacaa aaagtttcgt
     1621 cctgaccgtt tacgataaag acgcgccgac cggactgggc tggatgcact gggtggtcgc
     1681 cgacattccc gccgatgtcc gccgccgcaa cgcggcctcg ctgcaattaa gccgctgcgc
     1741 caacatcgcc gacgaccagt ccgcagccat atcggcggta atcagtttgc ggatttgccg
     1801 catcaggttg acgccttcgt acacggcaaa accgatgccg tcatgctgca accacgccaa
     1861 cacgccgcaa agcgcggcct ccgccacatt gtgcggcact ttttcatccg ccagcaccgc
     1921 agccgcataa tcaaacgccg cgcccatccg cccgggatgc ggcagcttca ccgcatcgca
     1981 cactgcctgc gccgtcccgt attgtgcggc aaacctttct atggcttcct gttcgaaagc
     2041 aatccattgc gcctgataga ggtcgtctga atcgggaata ttgatgacgt caaacgtctg
     2101 cccgcctgcc aaggcgaccg cctcacccgc cgcaatcctc aattcgcgcc tcgctcaccg
     2161 cagcttcttg cttccgcgcc gcacgataag cacagccggt tcatataccg ccacgctgcg
     2221 gtacaaggcg gtatgatgtt gcacgatgcc gcccaaagca cccaatcgtt cgcgcgtatg
     2281 aaagtaattt gacggcacta ttatctccaa cacgcagggc cgcacataag gcgcagccct
     2341 gtttaccctg atttggaagg ggttacttcc caaaaataaa ccaaaatccc actgccccga
     2401 atggccgggt ttcaaccata ttccgtcggt gtgcctgcaa cttgactccc tcccctgtgg
     2461 gggagggttg gggagagggt aaaacggggc agatacagac aatatttccg ttaccgcccc
     2521 gatgccctct ccctaaccct ctcccacggg agagggaatg gattgccgtt gaaataaatc
     2581 gctctacata aaaaatcaat gtgttatctc aaacccacgt taggtctaag caaatggtcg
     2641 gacatccgta tccggcaagc aagctgcttt cagacggcat ttccagccaa caagcgcgcc
     2701 aatatcccct catacaccgc cgacagcttc ggaatatcgt ccagccgcac gttttcgttg
     2761 atttggtgga tggtcgcatt ggacgggcct aattcgatga gttcttttgc aatggctttg
     2821 atgaagcgtc cgtccgaagt gccgccggtg gtggacaatt cggcctcaat gccgcaggtt
     2881 tcggcaatgg ctgcgcgtgc cacgtcggtc agtttgcccg cttgggtcag aaagggctgc
     2941 cccgaacacg accactgtaa atcgtattgc acgccgtgtt tgtccaaaat ggcgtgaacg
     3001 cgttgtttca gccctgcttc ggtggactcg gtggagaagc ggaaattgaa tttgacgctc
     3061 agctcgcccg gaatgacatt ggtcgcgcct gtaccgccgt tgatattgga aatttgaaag
     3121 ctggtcggcg ggaagtattt gttgccttcg tcccagactt cctgcgtcag ctctaacaag
     3181 gccggggcaa aagtatgcac gggattgatt gccaaatgcg gataggcaat atggccttgc
     3241 ttgcctttga cggtcaggtt gcccgacagc gagccgcgcc ggccgttttt aatcatatcg
     3301 cccaatttgt ccacggctgt cggttcgccg acgatgcagt agtcgataag ctcgtcgcgc
     3361 gctttcaaca catcgacgac tttggtcgtg ccgtccagcg cgtcgccctc ttcgtcggaa
     3421 gtaatcagga gcgcgatgct gccttgatga tcggggtgtt cggcaacaaa gcgttcgcag
     3481 gcggtaacga aacaggcgat gctggttttc atgtccgccg caccgcgccc gtataatctt
     3541 ccgtcgcgct cggccggctc gaacgggggc gaatcccatt tttcgacagg gcctgtcggt
     3601 acaacgtcgg tatgccctgc aaaacagacg acgggagctt tcgtgccgcg tcgcaaccag
     3661 atgtttttgg tgtcgccgaa atggagttct tcagccgcaa aaccgatttt gtgcaggcgt
     3721 tcggcaagga gtttttggca attttggtcg tcgggggtaa cggatgggcg ggaaatcaat
     3781 tctttggcga gttctaggga ttgggtttcg gtcatatttg ttcacttttg aaattagacc
     3841 atctgaaacg ttctgaatgt gattttcaga cggcatttag gttaggttgg catacggggt
     3901 gggtattttt acccgtcagt cttctgaatc atttgccgtg acacgcttcg taaagcggca
     3961 gcaaatcttc caccgtttcc gctatccatt tcgcgacatc ctgcctgccc aaatcgtcgc
     4021 gttcgatgtg tttgccgatg cagaagaaat cttcgtcgtt ttgcaacctt cggtcggatt
     4081 cattttgctg cgcgacagtg cggtagtcgt cgtattcgct ttccgcgccg tgccacatat
     4141 cgaaagaagc gtatttttca gtatcaaaat tatccaacca acggttgtaa tcgggcagag
     4201 taatcggcga cacgtcggct ttgtagcagt gccaatccaa gctgacactc agacggcggc
     4261 ggttaagtag tatcgacagg atggcggcag agtttttgta ttgggcgtat ttgaaatagg
     4321 caaagaaatg ggcgcgaacc tgccagccgt tacaccagcg ttcgatgtgc ggcggcgcaa
     4381 acggcgcacc caattcggcg gcaacctgct gaatcagctg ctgccatatc tgccagtttt
     4441 ccttgtagtc ggctttgatt tgcggaatgc tttcaggccg gtatttttta agctgggcaa
     4501 actggaaaaa cgggatattg aacaaatcgc aacttttcgg ggtcagcata atatatcctt
     4561 gagacgattg tttcagacgg cattatttgc gccggcgcgc cgccataatt tcgccgattt
     4621 cggtcagttt ttcttttggg ataaaggtgt tgcccatatc aaacagcggc tcttcaatcg
     4681 ccaaatgaac atcatatccc gccacaaaac gtttgaacgc ttcctcatcg gggacataag
     4741 cgttgtctgc ttcgagtttg gcaaattcgg cggaaacagc cgcccagttg tcgtgcagcc
     4801 cgatatgttg gcgcaaaagc tcgtccacgc tttcttgggc ttgcggcgca tattgcagca
     4861 gcagcgggaa gaagttttct tcttcgtctt catggtgcag cggcgcggca acgttgaaat
     4921 actgggcgat ttggcggatg gtttgcaaaa caatctgatt gcagccgttt tcggcgatat
     4981 agtccgacag catggcgact tgtccgcaaa aacggcgcac tttgccgtgg caggcataca
     5041 gcatttcaat cggttcggca aaggtaacgc ttttggtttc aaacggattc atgttttcgt
     5101 tctcaacggg cacttttcaa gcagtcattt tataataaaa cagcctgcac aaagcaggct
     5161 gtccgtcttt tgagacttta agcggattaa tcgaccaaag tcactttgcc gttcatcaaa
     5221 gcaccgtgac ctgggaaggt acaagcgaat ttgtattcgc cgtcagccag tttggcagga
     5281 tccaaagtca gggaagactc ttcgccgccg ccgatcagtt tggtgtgggc aacaacgcgc
     5341 gcatcgtcag gtttgacata gtcggtatcg gcagcaccta cgccgtcttt aaatacgccg
     5401 tccatgtctt cagctttggc aatcacaagg ttgtgaccca tgctggcttt gggttgcgta
     5461 ccggtatgtt tcagagtgat ggtgaactct ttacatgctt tgctgacttg gatgtctttg
     5521 gtgttgaact gcatattgtc gttggattcg acagttgccg cacaattgcc ggcagcaggg
     5581 gcttcggcag catctgcagg agcagcttcg gcggcaggcg cttcggaagc gggtgcttca
     5641 gcagcaggag ttgcctcggc agcaggcgcg gcaggttctt gagagcaggc agccaaaccg
     5701 ataacggcgg cagaaatcag agccagatac gctttcataa caaatctcca atcgataaaa
     5761 taatattcgg ttttacagaa atcaaagtgc aaccgccatt aacaaaacct tgaaaaagat
     5821 tccgccgcgt tgcacaaaca gatgtttcgg ggcggcattt tgctacaaat ttcatttgaa
     5881 atcaaagcct gtctgcaagt ttacaatcgt ttactttaaa aggggcaatt ttaccccgaa
     5941 cctatttctt tagtattaga cccattatcc tttacttctt aatattaacg gatgtttaca
     6001 caaattcccg tatacatttt atgcgccatg ccttctaacc aagtttgcca atgcctccgc
     6061 caattcggga tgccgttttt ccaactttac cgccgccgaa ccgaaactct ccagcgcagc
     6121 cttactcaaa tgcagggtat tggttttcgg cggtttttcc ggtttcgggg ccagcctgac
     6181 cgaaacagag cgtatcgaag catcaagccc tgccaactgc ggcaataccg acggtgcaat
     6241 cattttcaag cgcgatgccg ccatattgtt tgccgccaaa aggacaagcc tgccgtcttc
     6301 gatacatgcc gtctgaaaat gcgggtgcag gttggcaggc agcagttttt tcacggcggc
     6361 atccaaccgc cgccactgtc ccgcctgttt caaaagtccg gaaagcagcg cgtcccgcct
     6421 gcccaactgt tccaaattca taaaacatac acccaaaaag attgaaatac cgcaaacgcg
     6481 cctttatttc agacggcatt agcactttgc acaaacgctt gtgttaaaat cgcgttttcg
     6541 cccactatta tatcaggcgc aggaattatt catgctgaca aacattgcca agaaaatctt
     6601 cggcagccgc aacgaccgct tgctgaaaca ataccgtaaa tccgttgcca gaatcaacgc
     6661 gctcgaagaa cagatgcaag ccctaagcga tgctgatctg caagccaaaa ctgccgaatt
     6721 caaacaacgc ctcgccgacg gtcagacttt ggacggcatt ttgcccgaag ccttcgccgt
     6781 ctgccgcgaa gcgtcccgcc gcaccctcgg tatgcgccac ttcgacgtgc agcttatcgg
     6841 cggtatggtg ctgcacgacg gcaaaatcgc cgaaatgcgt accggcgaag gcaaaaccct
     6901 ggtcgccacc ctcgccgtct atctcaacgc gctggccggc aaaggcgtac acgtcgttac
     6961 cgtcaacgac tacctcgcct cacgcgatgc gggcattatg gagccgctct ataatttcct
     7021 cggtctgacc gtcggcgtga ttatttcaga tatgcagccg ttcgaccgtc aaaacgccta
     7081 tgccgccgat atcacctacg gcaccaataa tgaattcggc ttcgactacc tgcgcgacaa
     7141 tatggttacc gaccaatacg acaaagtgca gcgcgaattg aattttgccg ttgtcgatga
     7201 agtggattcc atcttgattg acgaagcgcg cactccgctg attatctccg gtcaggcgga
     7261 tgacaacatc cagttgtacc aaatcatgaa caccgttccg ccccacctcg tccgtcaaga
     7321 gacagaagaa ggcgaaggcg actattgggt cgacgaaaag gcacatcagg tcatcctgag
     7381 cgaagcaggt cacgaacacg ccgagcaaat cctgacccaa atgggattgc tggcagaaaa
     7441 cgactccctc tattccgccg ccaatatcgc cctgatgcac caccttatgg cggcattgcg
     7501 cgcgcattcc ctcttccaca aagaccaaca ttacgtcatc caagacggcg aaatcgtcat
     7561 cgtggacgaa ttcaccggcc ggctgatgtc cggccgccgc tggtcggagg gtctgcatca
     7621 agccgtcgaa gccaaagaag gcgtggaaat caaacgcgaa aaccaaaccc ttgcctccat
     7681 caccttccaa aactatttcc gcctgtacac caagctctcc ggcatgaccg gcacagccga
     7741 taccgaagct ttcgagttcc aaagcatcta caacctcgaa accgtcatca tcccgaccaa
     7801 ccgccctgta cagcgcaaag acttcaacga ccagattttc cgttccgccg aagaaaaatt
     7861 cgaagccgtc gtcaaagaca tcgaagaatg ccacaaacgt gggcagcccg tcctcgtcgg
     7921 caccaccagc atcgaaaact ccgaactggt ctcccacctt ctgcaaaaag ccggactgcc
     7981 gcacaacgtc ctcaacgcta aagaacacga acgcgaagcc ctgattgtcg cccaagccgg
     8041 caaagtcggc gcgattaccg ttgccaccaa tatggcggga cgcggtacgg acatcgtttt
     8101 aggcggcaac ctgaagcacc aaaccgatgc catccgtgcc gacgaaacct tgagcgacga
     8161 agagaaacag gcacaaatcg ccgcactcga aaacggctgg caggcagaac acgataaagt
     8221 aatggaagca ggcggcctgc acatcatcgg tacggaacgc cacgaaagcc gccgtatcga
     8281 caaccaattg cgcggacgtt ccggccgtca gggcgacccc ggatccagcc gtttctacct
     8341 ttcgtttgaa gacccgctgc tgcgcttatt cgcactcgac cgcgccgccg ccatcctcaa
     8401 ccgtctcgcc cccgaacgcg gcgttgccat cgaacacaac ctgctgacgc gccaaatcga
     8461 aggggcgcaa cgcaaagtcg aaggcagaaa cttcgatatg cgcaaacagg ttttggaata
     8521 cgacgacgtt gccaacgaac agcgcaaagt catttacagc cagcgcaacg aaattctgac
     8581 cagcaaagac atcagcgacc tgatgcagga aatccgttct gatgtcgtca gcgacctcgt
     8641 ggatacctat atgcctcccg acagcatgga agaacaatgg gacatcccga ctttggagaa
     8701 ccgtctggct gccgaattca gactgcacga agacatccaa tcctggctga aggcggacaa
     8761 tgcgattgac ggtcaagaca tcaaagaacg cctgatcgaa cgcatcgaaa acgaatatgc
     8821 cgccaaaacc gaactggtcg gtaagcaggc aatggccgat ttcgagcgca acgtgatgtt
     8881 gcaggtcatc gacaaccaat ggcgcgaaca cctcgccgct atggactacc tgcgacaagg
     8941 catacacctg cgcagctatg cccaaaaaaa tccgaagcag gaatataaac gtgaagcctt
     9001 taccatgttc caagacctgt ggaacggcat caaattccat attgcctccc tgcttacctc
     9061 ggttcaaatc gaacaaaacc ctgtcgcggt ggttgaagag caacccatcg gcaacatcca
     9121 gtccatccat tccgaatcgc ccgatatgga agaacttttg ggtcagtcgc aaaccgatct
     9181 ggttaccgaa gcctttaatc ccgatgggac agatttcagc cccgaagcct tggaagcgcg
     9241 ggggcaaatc gtccaccgca acgacccctg cccctgcggc agcggtttga aatacaaaca
     9301 atgccacggc aaactggctt aagcgtttga acgcaaatgc cgtctgaaca tcccgctccc
     9361 gtttcagacg gcattttgcc tgaaccgcca catccgactg ccattccgaa aaatcccgat
     9421 ttcgtaccgt ccgtaccaaa aacagacatc ccgtccgccc cacatcatga ttccatccga
     9481 cttcattgac gagcttttag ccaaaaccga tattgtcgat attatcgacg agcaggttcc
     9541 gctgaaaaaa ggcggggcga actatatggc gtgttgcccg ttccacaagg aaaaaacgcc
     9601 gtcgttttcg gtcagtccaa ccaagcagtt ttaccattgt ttcagttgcg gggcgcatgg
     9661 ttcggcgatt ggttttgtga tggagcatca ggggctgtcg tttccggagg ctgtgcagtt
     9721 tcttgccgac cgtgtgggca tggttgtgcc taaagtgcgt gggcagaacg ataatcccga
     9781 agtccgtgcc gaacgtaaga aaaaacagca gacgctggaa gaaacgacgg cggcggcggc
     9841 tgatttttac gcgcaacagc taaaattcaa tccggcggca aaagcttatt tggacaagcg
     9901 cggcttgagt gcagaagtta tcgcgcatta tggtttgggc tacgcgcccg acggctggca
     9961 gcctttggcg caagtgttcc aaccgtatcc gaataccgcg ttggtggata cggggatggt
    10021 gattgacaat gaggggcggt attacgaccg cttccgccat cggattatgt tccctatccg
    10081 caatccgcgc gggcaggtca tcggtttcgg cggcagggtg ctggacgact ccaaacccaa
    10141 atatctaaac tctcccgata cacctttgtt tgacaaaggg aaaaaccttt acggcttgta
    10201 tgaggggcgt gccgctgtca aggaagcgga gcggattctg gtggtcgaag gctatatgga
    10261 cgtggtcgcg ctggcacagt tcggcgtggg ctacggtgtg gcggccttgg gcacggcaac
    10321 aacagctgaa cacgtcaaaa tcctaatgcg tcaggcagac agtatttatt tctgtttcga
    10381 cggcgacagc gcggggcgaa aagcggcttg gcgcgcgctg gaaaacgcgt tgccgcagtt
    10441 gaaagacgac aaatcgctgc attttttgtt cctgcccgag gaacacgacc ccgacagtta
    10501 catccgtgcc tacggcaaag cgcaatttga agacgcgctt ctgaatcaaa gcaagccttt
    10561 gtcggagtat ttctgggaac acctttcaga cggcattcat ctcaatacgc aggaaggcaa
    10621 ggcggaattg gtgaaaacca gttcgccgct tttggcgcag attaccgcgc cggcattggc
    10681 ttatttgtta aaacaacggc ttagcgaact ggtcggcatc gaccccgaca acctcgcgca
    10741 actgctagga caggaagcgc cgaagcggca cgtcaaacaa aaaaactaca aactgcctcc
    10801 gatttccgtc aaacagcccg tcatgctgac gctggtacag cggcaaatcc gcagcctctt
    10861 gataaatccg gattgggctg catatataga cctgcccgat tatctggcgt tggacggtga
    10921 tttcgcctgc cttgccaatc ttgccgaatc gattaaaaac catgccgccg tacccgaaac
    10981 cgctcaggtt ttagagtata tgcgcggctc gccttacgaa gaaacgataa cccgaatctt
    11041 ccattcaacg caccaatcgg aagaaatgaa cagcagcagt gaagaagatt gcgagaattt
    11101 ccaaatcggc atgaaaaaac tgctcaatga gttaaaatac agccaaatcg aagcattgaa
    11161 acaaaaaagc ctgcaatccg gcttaaatga aagcgagaaa aaacttttgc tgtcgttgct
    11221 gaccgcaaaa caaaattgac cggcggattc cgccacccgt aaacccgtta tgccgtctga
    11281 aaagcactta ccccggctgc aacaacgaca cctgcagaac acccatcccc aaaagccttc
    11341 agacggcatc agagtaccct actctgccac gccttcaggt gcgtccaaac gcaaaccgtc
    11401 ggcatcttgc caacagaaag cagacaatgt ccaaaaacca aaatcacgaa gaataccaag
    11461 acgatgcccg acccctgacg attgaggaac aacgcgcgcg cctgcgccaa ctcatcatta
    11521 tgggcaaaga acgcggctac atcacctact ccgaaatcaa tgacgcactg cccgacgata
    11581 tgtccgatgc cgatcaaatc gacaacatcg tcagtatgat ttccggtttg ggtatccaag
    11641 ttaccgaaca cgcccccgat gcggaagaca tattgttaag cgacaatgcc gccgttaccg
    11701 acgatgatgc cgtcgaagaa gccgaggccg ccctttccag cgccgactcc gagttcggca
    11761 ggacgaccga ccccgtccgt atgtatatgc gcgaaatggg acaggtcgac ctgctgaccc
    11821 gcgaagacga aatcatcatc gccaaaaaaa tcgaaaacgc cctgaaaaat atggttcagg
    11881 ccatctccgc ctgcccggga tccattgcgg aaatcttaga actcatcgaa aaaatccgca
    11941 aagacgaaat ccgcgtcgac gaagtcgtag aagccattat cgacccgaat gaagtattgc
    12001 tcaacgaatt gggcttgggg cacttggaaa ccacagcgcc cgagaaacct tccaacgaca
    12061 attcggacga aaacgaagac gacgaagaat cggaagaaga tgcggatgaa atctcggcag
    12121 ccaatctcgc cgaattgaaa caaaaagtca tcggccactt tgcccaaatc gaaaaagact
    12181 acaaaaaaat gatcggtcgt ttggaaaaac accacagccg gcacaaagac tatctcgcct
    12241 accgcgacgc gattgccaac aaactgctgg aagtccgttt cgccacccgg caaatcgaca
    12301 gcctcagcag cagcctgcgc ggaaaagtag aaaacatccg caaactcgaa cgcgaaatcc
    12361 gcgacatctg cctcgaccgc gtccatatgg agcgcgacta cttcatccaa aacttcctgc
    12421 ccgaaatcac caatctggaa tggattgaag aagaaatcgc caaaggcagg gtttggagcg
    12481 acgcgctcga ccgcttccgc cacgccatcc tcgaaaaaca aaccgagttg gcagatatgg
    12541 aaaaagaaac ccgcatttcc atcgaagagt tgaaagaaat caacaaaaat atggtgtcga
    12601 gcgaaaaaga aaccgcagcc gccaaacagg aaatgattca ggcaaacttg cgcctcgtca
    12661 tttccattgc caaaaaatac accaaccgtg gcttgcagtt ccttgatttg attcaggaag
    12721 gtaacatcgg cctgatgaaa gcggtcgaca agttcgaata ccgccggggc tacaaattct
    12781 ccacctacgc aacctggtgg atccgccagg caatcacccg ttcgattgcc gatcaggcgc
    12841 gtaccatccg cattccggta catatgattg aaaccatcaa caagatgaac cgcatctcgc
    12901 gccaacacct tcaagaaacc ggcgaagaac ccgattccgc caaacttgcc gaactgatgc
    12961 agatgcccga agacaaaatc cgcaaaatca tgaaaatcgc caaagagccg atttcgatgg
    13021 aaacccccat cggcgacgac gacgattcgc acttgggcga cttcatcgaa gatgccaaca
    13081 atgttgcgcc ggccgatgcg gcaatgtaca ccagcctgca cgaagtaacc aaagaaatcc
    13141 tcgaaagcct gacaccgcgt gaggcaaaag tcctgcgtat gcgtttcggc atcgatatga
    13201 acaccgacca cacgctggaa gaagtcggca gacagtttga cgtaacgcgc gaacgcatcc
    13261 gacaaatcga ggcaaaagca ctccgcaagc tgcggcatcc gacaagaagc gaccgtttga
    13321 gaagtttctt ggacagcgaa gacagcaagc tgtaaaccaa aaaaccgcag gtttcaaata
    13381 cctgcggttt tttcttacac aataaacaac gcttccacat atcccacact cctatcccga
    13441 gacctttgca aaatccccca aaatccccta aattcccacc aagacattta ggagcacctt
    13501 cttccaacaa accgcccaag ccatgattgc caaacacatc gaccgtttcc cgctattgaa
    13561 gttggacc
//
LOCUS       DAWGKF010000043        13487 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.043, whole genome shotgun sequence.
ACCESSION   DAWGKF010000043 DAWGKF010000000
VERSION     DAWGKF010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13487)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13487)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13487
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.043"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(144..234)
                     /locus_tag="WHR07_000878"
     tRNA            complement(144..234)
                     /locus_tag="WHR07_000878"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(198..200),aa:Ser,seq:gga)
     gene            complement(273..359)
                     /locus_tag="WHR07_000879"
     tRNA            complement(273..359)
                     /locus_tag="WHR07_000879"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(323..325),aa:Leu,seq:cag)
     gene            complement(396..482)
                     /locus_tag="WHR07_000880"
     tRNA            complement(396..482)
                     /locus_tag="WHR07_000880"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(446..448),aa:Leu,seq:cag)
     gene            571..2946
                     /gene="rnr"
                     /locus_tag="WHR07_000881"
     CDS             571..2946
                     /gene="rnr"
                     /locus_tag="WHR07_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HEZ2130111.1"
                     /translation="MNKNIKSLNLREKDPFLSREKQRYEHPLPSREWIIELLERKGVP
                     SKIESLARELSITEDEYVFFERRLKAMARDGQVLINRRGAVCAADKLDLVKCRVEAHK
                     DGFGFAVPLMPTGEGDFVLYERQMRGVMHGDIVTVRPVGIDRRGRCEGTVLDIVERAQ
                     SKVVGRFYMDRGVAILEPEDKRLNQSIVLEPDGVARFKPESGQVIVGEIEVYPEQNRP
                     AVAKIIEVLGDYADSGMEIEIAVRKHHLPHQFSEACAKAVKKIPDHVRKSDLKGRVDL
                     RDLPLVTIDGETARDFDDAVFAEKIGRNYRLVVAIADVSHYVRPDDAIDTDAQERSTS
                     VYFPRRVIPMLPENLSNGICSLNPNVERLCMVCDMVITYAGNIKEYRFYPAVMRSHAR
                     LTYNQVWKWLSGGIGHPFKAQIDTLYKLFKILQKKRFERGAVEFDSIETQMLFDDNGK
                     IEKIVPVVRNDAHKLIEECMLAANVCAADFLLKNKHTALFRNHLGPTPEKLAALREQL
                     GLLGLQLGGGDNPSPKDYAALAGQFKGRPDAELLQVMMLRSMQQAVYEPHCDGHFGLA
                     YEAYAHFTSPIRRYPDLTVHRAIKAVLNQQTYTPKKSWQALGVHTSFCERRADDASRD
                     VENWLKTYYMRDKVGEVFEGKISGMTSFGIFVTLDGIHIDGLVHISDLGEDYFNFRPE
                     IMAIEGERSGIRFNMGDRVAVRVARADLDDGKIDFVLIAEGSGRGRKAKSSASVKPAG
                     TAGKGKPKTAAEKKTARGGKVRGRGASAAAESGKKAKKPVPIKVKKRKGKS"
     gene            complement(3285..4748)
                     /gene="guaB"
                     /locus_tag="WHR07_000882"
     CDS             complement(3285..4748)
                     /gene="guaB"
                     /locus_tag="WHR07_000882"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003767939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEZ2130112.1"
                     /translation="MRIVEKAYTFDDVLLVPAHSTVLPRDVKLQTKLTREITLNLPLL
                     SAAMDTVTEARLAISMAQEGGIGIIHKNMPPEMQARAVSKVKRHESGVVKDPVTVAPT
                     TLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRFENRVDLPVSAIMTPRERLV
                     TVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILKTTEFPNANKDSEGRL
                     RVGAAVGTGGDTEERVKALVEAGVDVIVVDTAHGHSQGVIDRVKWVKETYPHIQVIGG
                     NIATAKAALDLVAAGADAVKVGIGPGSICTTRIVAGVGVPQLTAIHNVAEALKGTGVP
                     LIADGGIRFSGDIAKALAAGAYSVMLGGMFAGTEEAPGEIELYQGRSYKSYRGMGSLG
                     AMSQGSADRYFQDKTDSTDKYVPEGIEGRVPYKGPIVNIIHQLTGGLRSSMGYLGCAN
                     IAEMHEKAEFVEITSAGMSESHVHDVQITKEAPNYHR"
     gene            complement(4949..5029)
                     /locus_tag="WHR07_000883"
                     /pseudo
     CDS             complement(4949..5029)
                     /locus_tag="WHR07_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798803.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(5075..5536)
                     /locus_tag="WHR07_000884"
     CDS             complement(5075..5536)
                     /locus_tag="WHR07_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130113.1"
                     /translation="MNIIMDSTRKFGILWEENSECNGFIYGKIQIIIGENIYPKICPY
                     GYFTLNAVFNSLKSSFEEKYYAGGNNGLDFGEQLFDIDKYNSLELCNIFSIDTTYMSG
                     GSNCEIDCLVLEMGYSGEEERLFYSFDNGKNFKEIRYKKGTVESVIFQLNL"
     gene            complement(5627..8185)
                     /gene="glnD"
                     /locus_tag="WHR07_000885"
     CDS             complement(5627..8185)
                     /gene="glnD"
                     /locus_tag="WHR07_000885"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HEZ2130114.1"
                     /translation="MPANLSSALETFKQQRDAAEAHYLKANRVSVFFREYTAAVETLL
                     AALWAEYFQNSALCLMAVGGFGRGELYPCSDVDLAVVSPAPLSDGIQEQIARFVQTLW
                     DCKLMPSVKSGSVDELCESVRNDITGDTAFLEARFLFGNRQTVDKLAEKMNAQRNVAA
                     FVEAKLVEMEHRHAKSQGSGAVLEPNIKSCPGGLRDIHTLLWIAKAQGLATDLPDLLK
                     QRILTRAEAGMLSHGYRRLAHIRIHLHLNANRAEDRLLFDLQPQVAESMGYEGLNLRR
                     QSEELMRVFYRAIKTVKQLGGILTPMLQSRVSSTPLRVTLRIDDDYIQVNNQIAARHT
                     DIFFRRPEHIFKIVEIMQQRNDITALEPQTLRAWWGATRKINRSFYQNSENRHRFAGF
                     FRNGNGLTQTLRFLNLYGVLGRYLPAWEKIVGLLQHDLFHIYPVDDHILTVVRNVRRL
                     ALDMHSHELPYASALMQSFEKQDILYLAAFFHDIAKGRGGDHAIQGIADARQFAADHF
                     LTGEESDLLAWLVENHLLMSAVAQKEDIQDPDVLDAFCKRVQTHERLSALYLLTISDI
                     RGTNPKLWNAWRASLLESLFHAAGRYLTGNGGNPHTLFGRRRQEAADLLTRAAVPEKQ
                     QKKLWNALGSAYFARHQSREILWHAANLVHDFETPIVRSRILPQSDSFQVMVFMPNGP
                     RLFARLCRIFSRHGFDILAARAFITEHDYILDTFIVQIPSQHAPEDYPDIQSALEAEL
                     NSFIHGHTVAEISSHSRRISRRSRYMPIAPSITITPEEDYPDWYSVEITAVNRPFLLA
                     DMAEIFFAHNVSLRYAKISTLDERAEDSFTVFSPDLKNPKIQSSLKQTLLEQLS"
     gene            complement(8234..8554)
                     /locus_tag="WHR07_000886"
     CDS             complement(8234..8554)
                     /locus_tag="WHR07_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ2130115.1"
                     /translation="MMGNKLTLPAELPDEQDLRAVLAYNMRLFRVNKGWSQEELARQC
                     GLDRTYVSAVERKRWNIALSNIEKMAAALGVAAYQLLLPPQERLKLMTNSADTRQMPS
                     ESGI"
     gene            complement(8879..9352)
                     /gene="bfr"
                     /locus_tag="WHR07_000887"
     CDS             complement(8879..9352)
                     /gene="bfr"
                     /locus_tag="WHR07_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEZ2130116.1"
                     /translation="MKGDRLVIRELNKNLGLLLVTINQYFLHARILKNWGFEELGEHF
                     FKQSIVEMKAADDLIERILFLEGLPNLQELGKLLIGESTEEIIACDLTKEQEKHEALL
                     AAIATAEAQQDYVSRDLLEKQKDTNEEHIDWLETQQELIGKIGLPNYLQTAAQED"
     gene            complement(9380..9844)
                     /gene="bfr"
                     /locus_tag="WHR07_000888"
     CDS             complement(9380..9844)
                     /gene="bfr"
                     /locus_tag="WHR07_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEZ2130117.1"
                     /translation="MQGNQAVVDYMNELLSGELAARDQYFIHSRLYSEWGYTKLFERL
                     NHEMEEETTHAEDFIRRILMLGGTPKMARAELNIGTDVVSCLKADLQTEYEVRDALKK
                     GIKLCEEAQDYVTRDLMVAQLKDTEEDHAHWLEQQLRLIELIGEGNYYQSQL"
     gene            complement(10307..11290)
                     /gene="lipA"
                     /locus_tag="WHR07_000889"
     CDS             complement(10307..11290)
                     /gene="lipA"
                     /locus_tag="WHR07_000889"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HEZ2130118.1"
                     /translation="MSEIKTDDPKRGIKLRGADKTARIPIKVVPLQEKLKKPEWIRAK
                     LPSRKFFEIKDILREQKMHTVCEEASCPNIGECFSKGTATFMIMGDICTRRCPFCDVG
                     HGRPNMLDPDEPKNLAESVKAMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPN
                     TKIEILVPDFRGRLDIALKILAETPPDVMNHNLETHPSLYRKARPGANYQHSLDLLKR
                     YKEMMPHIPTKSGIMVGLGETDEDVREIMRDMRAHNIEMITIGQYLQPSDGHLPVLRY
                     VTPEQFKIFEKEAYELGFSNAAIGAMVRSSYHADEQAAEALRESHGGCGHH"
     gene            complement(11283..11906)
                     /gene="lipB"
                     /locus_tag="WHR07_000890"
     CDS             complement(11283..11906)
                     /gene="lipB"
                     /locus_tag="WHR07_000890"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HEZ2130119.1"
                     /translation="MKIIHKGLVEYLPTFEAMKTFNANRTASTEDELWVVEHPPVFTQ
                     GLAGKPEHLLIRDDIPIVQIDRGGQITYHGPGQLVVYTMIDFKRRKTSVRNIVSALEN
                     SIIATLAEYGIEAAADPKRPGVYVGERKIASLGLRIKGGSVYHGLALNVNMDLSPFTH
                     INPCGYAGMEMTQIADFVQPCPTPDEVAAKLTAHLETQFTPKADNNE"
     gene            complement(11908..12183)
                     /locus_tag="WHR07_000891"
     CDS             complement(11908..12183)
                     /locus_tag="WHR07_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HEZ2130120.1"
                     /translation="MTEQKNKTSLIEFPCTFPLKVMGAVHPEFEQAVLDTVRLHAPDT
                     QAHHITTRPSSKGNYTGATVQVKVENQEQLDNIYRALTSHKLVKVVL"
     gene            12368..13438
                     /locus_tag="WHR07_000892"
     CDS             12368..13438
                     /locus_tag="WHR07_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEZ2130121.1"
                     /translation="MYRRKGRGIKPWMGAGAAFAALVWLVFALGDTLTPFAVAAVLAY
                     VLDPLVEWLQKKGLNRASASMSVMVFSLILLLALLLIIVPMLVGQFNNLASRLPQLIG
                     FMQNTLLPWLKNTIGGYVEIDQASIIAWLQAHTGELSNALKAWFPVLMRQGGNIVSSI
                     GNLLLLPLLLYYFLLDWQRWSCGIAKLVPRRFAGAYTRITGNLNEVLGEFLRGQLLVM
                     LIMGLVYGLGLVLVGLDSGFAIGMVAGILVFVPYLGAFTGLLLATVAALLQFGSWNGI
                     LAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVIFSLMAFGQLMGFVGMLAGLPLAA
                     VTLVLLREGVQKYFAGSFYRGR"
BASE COUNT         2931 a         3186 c         3821 g         3549 t
ORIGIN      
        1 taccgcaaaa cataccataa aaaaaacggt aacggatagt tgtaagcggt tgatgacgat
       61 tatagacaat aacgggtttt cccaatgaaa ttattgtttg aataataaaa aatcccaaac
      121 cgtaaaagtt tgggatttgt atttggcaga gaggaaggga ttcgaaccct cgatacgcta
      181 ttcacgtata cacgctttcc aggcgtgcga cttaaaccac tcatccacct ctctaatggc
      241 ggaaattatc ccaatcggga taatttatta tttggtgccc gggagaagac tcgaacttcc
      301 acacccatga ggataccagc acctgaagct ggcgcgtcta ccaattccgc cacccgggca
      361 atctaaaata ttgaaataaa gcaaagcatt tgatttggtg cccgggagaa gactcgaact
      421 tccacacccg tgaggatact agcacctgaa gctagcgcgt ctaccaattc cgccacccgg
      481 gctttgcttt atttgctgtt ttgcggtaca gtgtcctgcc gcaaagaagt cgctattata
      541 tagttcataa agagaatgtc aacagtccaa atgaataaaa atattaaatc tttaaattta
      601 cgggaaaaag acccgttttt aagtcgtgaa aaacagcgtt atgaacatcc tttgcccagt
      661 cgggaatgga taatcgaatt gttggagcgc aaaggtgtgc cttcaaaaat cgaatcgctt
      721 gcgcgcgagc tgtcgattac ggaagacgag tatgtctttt ttgaacgccg tctgaaggcg
      781 atggcgcggg acggtcaggt tttaatcaac cgtcggggcg cggtttgcgc ggcggacaaa
      841 ttggatttgg tcaaatgccg cgtcgaggcg cataaggacg gtttcggctt cgccgtaccg
      901 ctcatgccga cgggcgaagg agatttcgtt ttatacgaac gccagatgcg tggtgtcatg
      961 cacggcgaca ttgttaccgt ccgccctgtc ggcatagatc gcagggggcg gtgcgaaggg
     1021 acggttctgg atattgtcga acgcgcgcaa agcaaagttg tcggtcgttt ctatatggat
     1081 aggggcgtgg cgattttgga gccggaagac aagcgtctga accaaagcat cgtattggaa
     1141 ccggacggcg tggcgcgttt caaacctgaa tccggtcagg tcatcgtcgg cgaaattgag
     1201 gtttatcctg agcaaaaccg gccggcagtg gcaaaaatca tcgaagtttt gggcgattat
     1261 gccgacagcg gcatggagat tgaaattgcc gtgcgcaagc atcatttgcc gcaccaattc
     1321 agtgaagcgt gtgccaaagc cgtgaaaaaa attcccgacc atgtacgcaa aagcgatttg
     1381 aaaggccgcg tcgatttgcg cgacctgcct ttggtaacga ttgacggcga aacggctcga
     1441 gattttgacg atgcggtgtt tgccgaaaaa atcggacgca attaccgtct ggtcgtggcg
     1501 attgccgatg tcagccatta tgtccgcccc gatgacgcta tcgacacgga cgctcaggaa
     1561 cgcagcacca gtgtttactt cccgcgccgc gtgattccca tgttgccgga aaacctgtcc
     1621 aacggcatct gctcgctcaa tcctaatgtc gagcgtttgt gtatggtgtg cgatatggtc
     1681 atcacttacg cgggcaatat taaagaatac cgcttctacc ccgccgtgat gcgctctcat
     1741 gcccgcctga cctacaacca agtttggaaa tggctttcag gcggaatcgg gcatccgttc
     1801 aaagcccaaa tcgacacgct ttacaaactc ttcaaaatcc ttcagaaaaa gcgtttcgaa
     1861 cgcggggcgg tggagtttga cagcatcgaa acccaaatgc ttttcgacga caacggtaaa
     1921 attgaaaaaa tcgtccccgt tgtccgcaac gatgcccaca agctgattga agaatgtatg
     1981 ttggcggcaa acgtttgcgc agcggatttt ctgttgaaaa acaagcatac cgcattgttc
     2041 cgcaaccatt tggggcccac gcccgaaaaa ctcgccgcct tgcgcgagca gctcggtctg
     2101 ttggggcttc aacttggcgg cggcgacaac ccgtcgccga aagactatgc cgcgcttgcc
     2161 ggacagttca aaggcaggcc ggatgccgaa ttgctgcaag tcatgatgtt gcgctccatg
     2221 caacaggcgg tttacgaacc gcattgcgac ggacactttg gtcttgccta cgaagcatac
     2281 gcccacttca cctcgcccat ccgccgctat cccgacctga ccgtacaccg cgccatcaaa
     2341 gccgtgttga atcagcaaac ctacacgcca aaaaaaagct ggcaggcttt gggcgtgcat
     2401 acctcgttct gtgagcgccg tgccgacgac gccagccgcg acgtggaaaa ctggctgaaa
     2461 acctattata tgcgcgataa ggtcggcgaa gtattcgaag gtaaaatctc cggcatgacc
     2521 agttttggta tctttgtaac actggacggc atccacattg acggcttggt gcatatcagc
     2581 gatttgggcg aagactattt caacttccgc cccgaaatca tggcaatcga aggcgaacgc
     2641 agcggcatcc gtttcaacat gggggacagg gttgccgtcc gggtcgcccg tgccgatttg
     2701 gatgatggaa aaatcgattt tgtcctgatt gccgagggga gcggcagggg gcggaaagct
     2761 aaatcatccg cgtctgtcaa accggcaggg acggcgggga aagggaaacc gaaaaccgcc
     2821 gccgagaaaa aaacagcccg aggcggcaaa gtaaggggaa ggggcgcgtc tgccgccgca
     2881 gaatcgggga aaaaggcaaa gaaaccggtt ccgattaagg taaaaaaacg gaaaggcaaa
     2941 tcataatgct gacggggtgg cttggggagg gcggggcata ctttcccgaa gccgccgccc
     3001 gattttttga tatggcggcc ggcgcatcat ttcaggccaa tcgaaacgcc cgtattgaaa
     3061 gattgcgttt atttccaccg ccgttttgaa ggccggcggt attcggcaga cggggcgcaa
     3121 acggcgttca gacggcattt tcattctttc ggcgtgtccg tccgaattgc tttgcccgtc
     3181 cgcgcaatca gcccgtgcgg cttgccttga acggacaaaa aatgccgtct gaaacccgaa
     3241 aatcaggttt cagacggcat tttgccttga aaaggctgtt caaatcagcg gtggtagttc
     3301 ggtgcttctt tggtaatttg aacgtcgtga acgtgcgatt cgctcatacc tgcggaagtg
     3361 atttccacaa attctgcttt ttcgtgcatt tcggcaatat tggcgcaacc caaatacccc
     3421 atgctggagc gcagtccgcc ggtcagttgg tggatgatgt tcacaatcgg gcctttgtag
     3481 ggaacgcggc cttcgatgcc ttcggggacg tatttgtcgg tgctgtcggt tttgtcttgg
     3541 aagtagcggt cggcagaacc ttggctcatc gcgcccaatg aacccatacc gcgataggat
     3601 ttgtacgagc ggccttggta gagttcgatt tcgcccggcg cttcttccgt gcctgcaaac
     3661 ataccgccga gcatgacgct gtacgcgcct gcggcgaggg ctttggcgat gtcgccggag
     3721 aagcggatgc cgccgtcggc aatcagcgga acgcccgtgc ctttgagggc ttcggcaacg
     3781 ttgtgaatgg cggtcagttg cggcacgccg acacctgcca cgatacgggt ggtgcaaatc
     3841 gatcccggac cgataccgac tttgacggca tccgcgccgg cggcgaccaa atccaatgcg
     3901 gctttggcag tggcgatgtt gccgccgatg acttggatgt gcggataggt ttctttcacc
     3961 catttcacgc ggtcgatcac gccttggctg tgcccgtggg cggtatcgac gacgatgaca
     4021 tcgactcctg cttctaccaa tgcttttacg cgctcttcgg tgtcgccgcc ggtgccgact
     4081 gccgcaccga cgcgcagacg gccctcggag tctttgttgg cattgggaaa ttcggtggtt
     4141 tttaaaatat ctttgacggt aatcagacct ttgagttcgt ctttttcgtt cagaaccaaa
     4201 acgcgctcga ctttgtgcgt gtgcatcagt tcgcgcgctt cgtctatgct tgtgccttcg
     4261 gggacggtaa ccagacgttc gcgcggggtc ataatggcgg aaacgggcaa atcgacgcgg
     4321 ttttcaaaac gcaggtcgcg gttggttacg atgccgacga ctttgccgtt ttcaacgacg
     4381 ggcaggccgg acattttgcg tttgcgctgc gcgcgcattt ccaagacttc gcggatgagc
     4441 gtcgtcggcg caacggttac ggggtctttg accacgccgc tttcgtggcg tttcactttg
     4501 gaaacggcgc gcgcctgcat ctccggcggc atatttttat ggatgatgcc gatgccgcct
     4561 tcctgtgcca tcgaaatggc gaggcgcgcc tcggtaacag tatccatcgc ggcggaaagc
     4621 agggggaggt tgagcgtgat ttcgcgggtg agcttggttt gaagtttaac gtctcgcggc
     4681 agcacggtcg aatgtgcggg aaccaacaaa acatcgtcga aagtataggc tttttctacg
     4741 atacgcataa tgctcggtct ttcagtttgt gcaagatgca cggcattata gcacgttacc
     4801 ggcggcttga cagtttatca ggtttaattt tggtcccctt tgaatagccc ggttttcctt
     4861 tgccgaccac tgttgctccc gttctttcaa tttcaggaaa agcttttttc taatttttgg
     4921 taagtggctc agttattgaa gccctatatc gggcggtaac ttccagcaca aaaaaacgga
     4981 gtagttcttt atttattttt tcctttaatt ttcagtatat tatcttaata tttcgagggt
     5041 aacatatctg ctaatctagt tacagcccca tatattatag attcaattga aaaataacag
     5101 attcaactgt acctttctta tacctgattt ctttaaagtt tttcccattg tcaaaactat
     5161 aaaaaagtct ctcttcctca ccagaatatc ccatttctaa tactaaacaa tctatttcac
     5221 aattactccc tccactcata tatgtagtat caatagaaaa tatattgcat aattccagag
     5281 aattatattt atctatatca aatagttgct ctccaaaatc taaaccattg tttccacctg
     5341 cataatactt ctcttcaaag gatgacttca aactattaaa aactgcattt agcgtaaaat
     5401 atccatatgg gcatatctta ggatatatat tctctcctat tattatctga atttttccat
     5461 aaataaaacc attacattca gagttttctt cccataaaat cccaaatttt cttgttgagt
     5521 ccataataat attcatataa atccttatat taataaatta tttacaatat cccccgcttt
     5581 cagacggcat acggcgtggc ggcggaatgc cgtctgaagg cgggcgttat gataattgtt
     5641 ccagcagcgt ctgcttcaat gaggactgga tttttgggtt tttcaggtcg gggctaaaaa
     5701 cggtaaaact gtcttcggcg cgttcatcca gtgtggagat tttggcatag cgcaggctga
     5761 cgttgtgggc gaaaaagatt tccgccatat cggcgagcag gaaggggcgg ttgacggcgg
     5821 taatttcgac ggagtaccag tcggggtagt cttcttcggg ggtaatggtg atgcttggcg
     5881 cgatcggcat gtagcggctg cggcggctga tgcggcggct atggctggag atttcggcaa
     5941 cggtgtgtcc gtggataaag ctgttgagtt cggcttcgag cgcgctttgg atgtcggggt
     6001 agtcttcggg agcgtgctgc gaggggattt gcacgatgaa ggtgtcgagg atgtagtcgt
     6061 gttcggtaat aaaggcgcgg gcggcgagaa tgtcgaagcc gtggcggctg aagatacggc
     6121 agaggcgggc gaacaggcgc gggccgttgg gcataaaaac catgacttga aagctgtcgc
     6181 tttggggcag gatgcggctg cggacgatgg gggtttcaaa atcgtgtacg aggttggcgg
     6241 cgtgccacag gatttcgcgg gactggtggc gggcgaagta ggcggaaccg agcgcgttcc
     6301 atagtttttt ctgctgtttt tcggggacgg cggcgcgggt gagtaagtcg gcggcttcct
     6361 gccggcggcg gccgaagagg gtgtgcgggt tgccgccgtt gcctgtaagg tagcgtccgg
     6421 cggcatggaa gaggctttcc agcaggctgg cgcgccatgc gttccacagc ttgggattgg
     6481 tgccgcgtat gtcggaaatg gtcagaaggt agagcgcgct gaggcgttcg tgggtttgga
     6541 cgcgtttgca gaaagcatcg agtacgtcgg ggtcttggat gtcttctttt tgggcgacgg
     6601 cagacatcag caggtggttt tcgaccagcc aggcgagcag gtcgctttct tctccggtca
     6661 ggaagtggtc ggcggcaaat tggcgcgcgt ctgcgatgcc ttgtatggca tggtcgccgc
     6721 cgcgtccttt ggcgatgtca tggaaaaagg cggcaaggta gaggatgtct tgtttttcaa
     6781 aggactgcat cagtgcagag gcgtagggca gctcgtggct gtgcatatcc aaggcaaggc
     6841 ggcggacgtt gcggacgacg gtgaggatgt ggtcgtccac gggatagatg tggaacaggt
     6901 cgtgctggag caggccgacg attttttccc acgcgggcag gtagcgtccc aatacgccgt
     6961 agaggttgag gaagcgcagg gtttgggtca gtccgttgcc gttgcggaaa aagccggcga
     7021 agcggtggcg gttttcagaa ttttggtaga agctgcggtt gattttgcgc gtcgcgcccc
     7081 accatgcgcg cagggtttgc ggttcgagcg cggtaatatc gttgcgctgc tgcatgattt
     7141 cgacgatttt gaaaatgtgt tcgggccgtc tgaaaaaaat atcggtgtgc cgcgcggcga
     7201 tttggttgtt gacttggatg tagtcgtcgt caatccgcag ggtaacgcgc aacggggtgg
     7261 aggaaacgcg gctttgcagc ataggcgtga ggatgccgcc cagttgtttg acggttttaa
     7321 tcgcgcggta aaacacgcgc atcagttctt cgctttggcg gcggaggttc aagccttcat
     7381 aacccatgct ttcggcgact tgcggctgca aatcgaacag caggcggtct tcggcgcgat
     7441 tggcgtttaa atgcagatgg atgcggatgt gggcgaggcg gcggtagccg tgcgaaagca
     7501 taccggcttc ggcacgcgtc aaaatccgct gtttgagcag gtcgggcagg tcggtcgcca
     7561 agccttgcgc cttcgctatc caaagcaggg tgtggatgtc gcgcagaccg cccggacagc
     7621 ttttgatatt cggctccaat actgcccccg aaccttgcga tttggcgtgg cggtgttcca
     7681 tctccaccag ttttgcctcg acaaacgccg ccacattgcg ctgcgcgttc attttttccg
     7741 ccagtttatc caccgtttgg cggttgccaa acaaaaacct agcctctaaa aacgctgtgt
     7801 cccccgtaat atcattgcgc acgctttcac atagttcatc aacgctgccg ctttttacag
     7861 acggcatcag tttgcagtcc cacagggttt ggacaaaccg ggcaatctgt tcctgaatgc
     7921 cgtctgaaag cggggcaggg gagacaaccg ccaaatccac gtccgaacag ggatacagtt
     7981 cgccgcgccc gaagccgcct accgccatca ggcataacgc gctgttttga aaatactctg
     8041 cccacaatgc cgccagtaag gtttcgactg ccgccgtgta ttctctgaaa aataccgaca
     8101 cgcggttggc tttcaaataa tgcgcttcgg cggcatcgcg ctgctgtttg aaggtttcca
     8161 gtgctgaaga caggtttgca ggcattttta ttctttcgat tggcgggaaa aagggaggcg
     8221 gatggttcgg cggtcaaata ccgctttcag acggcatttg tcgggtatcg gcggaattgg
     8281 tcatcagctt caaccgttcc tgcggcggca gcagcaactg atacgccgcc acgcccaaag
     8341 ccgccgccat tttttcgata ttcgacaggg cgatgttcca gcgtttgcgc tcgactgccg
     8401 acacataagt cctgtccaaa ccgcattgcc gcgccaattc ttcttgcgac caacccttgt
     8461 tcacgcggaa aagccgcata ttgtatgcca ataccgcccg caaatcctgt tcgtcaggca
     8521 gttcggcagg cagagtcaat ttgttgccca tcatttgctt ccaaataaat ggttaaagtt
     8581 aagcatttgc tgttacggat tttacttcac ataaaagcca aaaaaaaggg gtggcggcag
     8641 ccacacccaa acacacacac atcaagagga aagaggtaac atcaagacag attgggaaac
     8701 agcaaacaag caatttagat ttcatatcgg tattatcaaa caaaaaccgt tatcgagtat
     8761 tgattcaaat caattgagat ttgattcgca aaccggtaaa gaaaaacggc atacccgttt
     8821 atacggatat gccgtctgat gatgcagggg actgctgtat ttggcagtgg tttgtgtttt
     8881 agtcctcttg cgccgctgtt tgcaggtagt tcggcaaacc aattttgccg atcagttcct
     8941 gctgggtttc aagccagtcg atgtgttctt cgttggtgtc tttttgtttt tccaacaaat
     9001 cacggctgac gtaatcctgt tgcgcttctg ctgtggcgat ggcggcaagc agggcttcgt
     9061 gtttttcctg ttctttggtc aaatcgcagg cgatgatttc ttcggtggac tcgccaatca
     9121 gaagcttgcc cagttcttgc aggttcggca gaccttcgag gaacagaatg cgctcgatca
     9181 aatcgtcggc agctttcatt tcaacgatgg actgtttgaa gaaatgttcg cccagttctt
     9241 caaagcccca gtttttcaaa atacgggcgt gaaggaaata ttggttgatg gttaccagca
     9301 gcaagcctaa gtttttgttt agctcgcgga taaccaaacg gtcgcctttc atacggactc
     9361 cttttattcc gaatacggat tacagttggc tttggtagta gttgccttcg ccaatcagct
     9421 cgatcaggcg cagctgctgt tccagccagt gggcgtggtc ttcttcggta tctttcagtt
     9481 gggcaaccat caggtcgcgc gtaacatagt cttgagcctc ttcgcacagt ttgatgcctt
     9541 ttttcaacgc atcacgtact tcatattcgg tttgcaggtc ggctttgagg caggaaacca
     9601 cgtccgtgcc gatattcagt tcggcgcgtg ccattttcgg cgtaccgccc agcatcagga
     9661 tgcggcggat gaagtcttcg gcgtgtgtgg tttcttcttc catctcgtgg ttgagacgtt
     9721 caaaaagttt ggtgtagccc cattcggagt agaggcggga gtggataaag tattggtcgc
     9781 gtgccgccag ctcgccagac agcaattcgt tcatataatc aacaacagct tgattgcctt
     9841 gcataatatc tctctttctg taacttggtt ttcggtatgt ctgaacagca tctgtgtcgc
     9901 tattcgggat gcgtgcattg tatgcaaaag ctgtcggcat gacaaatttt ctatttaaaa
     9961 tacaaacaat tatcaaaaga aatagggcgt attccccgat gccttccaaa tcagtatgct
    10021 gtttcttatc ggtttttttg ctgctaaaac taagaatcca tctcatccat aaagaacatt
    10081 tacacttgtt aaccatagct aaaagcaaat actgtacggt tttttatcaa aatttataat
    10141 gaatcgttct cattaaccga cagattcttt tgagattatc ggattttggg aataaattat
    10201 gccgtctgag gggctttcag acggcataga caattaaagc tgattaaaca acgcggcaga
    10261 cagcagcgta ggaaattatt ttttacttcg gaacggtatt ttgggtttaa tgatgcccgc
    10321 aaccgccgtg gctttcgcgt aaggcttcgg cagcctgttc gtcggcgtgg tagctggaac
    10381 gtaccatcgc gccgatggcg gcattgctga agcccagttc gtatgcttct ttttcaaaga
    10441 ttttgaactg ctcgggcgta acgtagcgca ggacgggcag gtgtccgtct gaaggctgga
    10501 ggtactgtcc gatggtaatc atttcgatat tgtgcgcccg catatcgcgc ataatttcac
    10561 gcacgtcttc gtctgtttcg cccaagccga ccatgatgcc ggatttggtc gggatgtgcg
    10621 gcatcatttc tttataacgt tttaataagt ctaaagaatg ttgataattg gcaccgggac
    10681 gggcttttct gtacaggctc ggatgggttt ctaggttgtg gttcatcacg tcgggcgggg
    10741 tttcggcaag gattttgagt gcgatgtcca agcgtcctcg gaagtcgggg acgaggattt
    10801 cgattttggt gttcgggctg gtttcgcgga tggctttgat gcagtcggcg aaatgctgtg
    10861 cgccgccgtc gcgcaggtcg tcgcggtcga cggaggtgat gacgacgtaa cgcaggttca
    10921 tggctttgac ggattcggcg aggtttttcg gttcgtcggg gtcgagcata ttgggccgac
    10981 cgtgtcccac gtcgcagaac gggcagcggc gggtgcagat atcgcccata atcatgaagg
    11041 tcgccgtgcc tttgctgaag cattcgccga tgttggggca ggaggcttcc tcgcaaacgg
    11101 tgtgcatctt ttgttcgcgc aaaatgtctt tgatttcaaa gaatttgcgc gatgggagtt
    11161 tggcgcgtat ccattcgggc tttttcagtt tttcctgaag ggggacgact ttgatgggga
    11221 tgcgcgcggt tttgtccgcg cctctgagtt tgatgccgcg tttggggtcg tcggttttga
    11281 tttcactcat tgttatctgc tttcggtgtg aattgtgttt caaggtgtgc ggtaagtttg
    11341 gcggcgactt cgtccggcgt ggggcagggt tggacaaaat ccgcgatttg cgtcatttcc
    11401 ataccggcgt agccgcaggg gttgatgtgg gtaaacgggc ttaaatccat attgacgttg
    11461 agcgcaaggc cgtgatagac ggaacctcct ttgatacgca gccccagtga ggcgattttg
    11521 cgttcgccga cgtaaacgcc ggggcgtttg ggatctgccg ccgcttcgat gccgtattcc
    11581 gccaatgtgg cgatgatgct gttttcaagc gcggaaacaa tgttgcggac gctggttttg
    11641 cgccgtttga aatcaatcat cgtataaacg accaattgcc cgggtccgtg ataggtaatc
    11701 tgcccgcccc ggtcgatttg gacgatggga atgtcgtcgc ggatcagcag gtgttcgggt
    11761 ttgccggcca gcccctgtgt gaacacgggg ggatgttcta ccacccacaa ttcatcttcg
    11821 gtagaggcgg tacggttggc gttgaaagtt ttcattgcct caaaagtcgg cagatattca
    11881 accaaacctt tatgtatgat tttcatctca aagtaccact ttgaccaatt tgtgcgaagt
    11941 cagcgcgcgg tagatattgt caagttgttc ttggttttca acctttactt gtacggtggc
    12001 gccggtatag ttgcctttgc tgctcggacg cgtggtgatg tggtgcgcct gcgtgtcggg
    12061 ggcgtggagg cggacggtgt ccaataccgc ctgctcgaac tcgggatgca ccgcgcccat
    12121 tactttcaat gggaaggtgc agggaaattc gatgagggat gttttgtttt tttgttcggt
    12181 catgatgtgc tgccttgtcg tgtacggtat gccgtctgaa ggcgggtttg cctttcagac
    12241 ggcatcggat gtgcgttatt ttagcctaaa ccgcgataac aggctatcgg gaaggcggag
    12301 gcttttttga cggcgcggcg gttctgctat actggcgcac aatattattt ttagaagggt
    12361 ggtttttatg tatcggagga aagggcgggg catcaagccg tggatgggtg ccggtgcggc
    12421 gtttgccgcc ttggtctggc tggttttcgc gctcggcgat actttgactc cgtttgcggt
    12481 tgcggcggtg ctggcgtatg tattggaccc tttggtcgaa tggttgcaga aaaagggttt
    12541 gaaccgtgca tccgcttcga tgtctgtgat ggtgttttcc ttgattttgt tgttggcatt
    12601 attgttgatt attgtcccta tgctggtcgg gcagttcaac aatttggcat cgcgcctgcc
    12661 ccaattaatc ggttttatgc agaacacgct gctgccgtgg ttgaaaaata caatcggcgg
    12721 atatgtggaa atcgatcagg catctattat tgcgtggctt caggcgcata cgggcgagtt
    12781 gagcaacgcg cttaaggcgt ggtttcccgt tttgatgagg cagggcggca atattgtcag
    12841 cagtatcggc aacctgctgc tgcttccctt gctgctttac tatttcctgc tggattggca
    12901 gcggtggtcg tgcggcattg ccaaactggt tccgaggcgt tttgccggtg cttatacgcg
    12961 cattacaggc aatttgaacg aggtattggg cgaatttttg cgcgggcagc ttctggtgat
    13021 gctgattatg ggtttggttt acggcttggg gttggtgctg gtcgggctgg attcggggtt
    13081 tgcaatcggt atggttgccg gtattttggt ttttgttccc tatttgggcg cgtttacagg
    13141 actgctgctg gcaaccgtcg ccgccttgct ccagttcggt tcgtggaacg gcatcttggc
    13201 tgtttgggcg gtttttgccg taggacagtt tctcgaaagt tttttcatta cgccgaaaat
    13261 cgtgggagac cgtatcgggc tgtcgccgtt ttgggttatc ttttcgctga tggcgttcgg
    13321 gcagctgatg ggctttgtcg gaatgttggc aggattgcct ttggccgccg taaccttggt
    13381 cttgcttcgc gagggcgtgc agaaatattt tgccggcagt ttttaccggg gcaggtaggc
    13441 ggttccgaaa catatttgaa gcggaataca accctgcccg agtttaa
//
LOCUS       DAWGKF010000044        13389 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.044, whole genome shotgun sequence.
ACCESSION   DAWGKF010000044 DAWGKF010000000
VERSION     DAWGKF010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13389)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13389)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13389
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.044"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(110..538)
                     /locus_tag="WHR07_000893"
     CDS             complement(110..538)
                     /locus_tag="WHR07_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01244 family phosphatase"
                     /protein_id="HEZ2130122.1"
                     /translation="MAILKLDEHLYISPQLTKADAEQIAQLGIKTVICNRPDREEESQ
                     PDFAQIKQWLEQAGVTGFHHQPVTARDIQKHDVETFRQLIGQAEYPVLAYCRTGTRCS
                     LLWGFRRAAEGMPVDEIIRRAQAAGVNLENFRERLDNARV"
     gene            complement(603..2351)
                     /locus_tag="WHR07_000894"
     CDS             complement(603..2351)
                     /locus_tag="WHR07_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M61 family metallopeptidase"
                     /protein_id="HEZ2130123.1"
                     /translation="MIHYKITPSPLDHEWHILLTFTQDDDLPIEISLPNWVPGSYLIR
                     DFSRHITSIHASCNGTSMPLEQIAKNRWHAAAVRGEWQIRYTVYAFDLSVRGSFLTTE
                     RGFFDGSCLFLKVEGTETLPHRLELTGIPSEWRIATTLPETGRFVFQAASYAELIDRP
                     VEMGLIEFLDFEAAGIPHTIALSGIYPDFDRNRLVSDIKKICETELAVFSSPAPFQKY
                     LFLLHVGDHIYGGLEHTDSTALLADRHSLPPYGMTDADDTYTTLLGLFSHEYFHAWNV
                     KSIKPAAFVPYDLDKENYTEQLWAFEGITSYYDDLFLARSRTISPESYLNLLAQGITR
                     VQQTRGRLRQTLAESSFTAWNKFYKPDENSPNAIVSYYQKGALAALCLDLIIRNRSNG
                     RHSLDTLMDKLYREWRDTHSGIPEKHWQIRCQEITGLDLEDFFQKALYSTEDLPLAEC
                     LATAGVGLTFLPLPRQHGGGYAEHICPVPPAGDFGARFKQNTDHIVLTHVFNSGSAES
                     AALCPQDKIIALDGYACTDFTAQWARYHVNAKINIHFFRAGILRQTVLTVQAAAADTA
                     ILHITDRNLLDNWLFG"
     gene            2678..4111
                     /gene="ccoN"
                     /locus_tag="WHR07_000895"
     CDS             2678..4111
                     /gene="ccoN"
                     /locus_tag="WHR07_000895"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HEZ2130124.1"
                     /translation="MDTQTYNYKVVRQFAIMTVVWGIVGMLVGVIVAAQLFAPALDLS
                     NIGPWFHFGRLRPLHTNAVIFAFGGCGLIGTSYYVVQRTCNTRLFGGWLPAFTFWGWQ
                     AVIVAAVVSFPMGWTQGKEYAELEWPIDILITLVWVAYAIVFFGTIAKRKIKHIYVAN
                     WFYGGFILAVALLHIVNNISIPAGLMKSYPVYSGAIDAMVQWWYGHNAVGFFLTAGFL
                     GMMYYFVPKQAARPVYSYRLSVVHFWALIFTYMWAGPHHLHYTALPDWTQSLGMVLSL
                     ILFAPSWGGMINGIMTLSGAWDKLRTDPILKFLIVSLSFYGMSTFEGPMMSIKTVNAL
                     SHYTDWTVAHVHAGALGWVGFVTIGSVYYMIPRLFGKEQMHSTKLVEAHFWIATIGVV
                     LYIAAMWIAGVMQGLMWSSLNDDGTLTYSFVESVKRTMPYYVIRFAGGLLYLSGMCIM
                     AYNVYRTAIGGKAVDAEIPAVSQTQHH"
     gene            4138..4749
                     /gene="ccoO"
                     /locus_tag="WHR07_000896"
     CDS             4138..4749
                     /gene="ccoO"
                     /locus_tag="WHR07_000896"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HEZ2130125.1"
                     /translation="MKLQQLAEEKIGVLIVFTLLVVSVGLLIEVVPLAFTKAATQPAP
                     GVKPYNALQVAGRDIYIREGCYNCHSQMIRPFRAETERYGHYSVAGESVYDHPFQWGS
                     KRTGPDLARVGGRYSDEWHRIHLLNPRDVVPESNMPAFPWLARNKVDVDATVANMKAL
                     RKVGTPYSDEEIAKAPEALANKSELDAVVAYLQGLGLALKNVR"
     gene            4754..4924
                     /locus_tag="WHR07_000897"
     CDS             4754..4924
                     /locus_tag="WHR07_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CcoQ/FixQ family Cbb3-type cytochrome c oxidase
                     assembly chaperone"
                     /protein_id="HEZ2130126.1"
                     /translation="MDINGIRALFTVWIFICFLLVLYIVFNRRNKKNYDNAANSIFDE
                     NQDAQDKKSENR"
     gene            4948..6045
                     /gene="ccoP"
                     /locus_tag="WHR07_000898"
     CDS             4948..6045
                     /gene="ccoP"
                     /locus_tag="WHR07_000898"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit III"
                     /protein_id="HEZ2130127.1"
                     /translation="MNTTSQFTSNFWNIYIAVIVLLSFIALAWLLLSQNVVKRPKKGE
                     EVQTTGHEWDGIAEYDNPLPRWWFWLCVLTWLFGIGYLVMYPGVGDYKGLLKWTSHNQ
                     YEKEVKKADEQYGKLYAKFADMPIEKVAKDPQAKQIAQNLFNTYCIQCHGSDAKGSKG
                     FPNLTDSDWLWGGDPDKIHETIEKGRVATMPAWGPALGEEGVKDVAHYVMSLSKPEGQ
                     YDEERAARGQALFSGPPANCFTCHGDKGQGIQGLGPNLTDDVWLWGGTQKSIIETITN
                     GRSSQMPAWGHFLDKDKLHIMTAYVWGLSDKDGKAPVKKAEPAPTPAPAAEPAASAPA
                     EAAQAVSEAKPAAAEPKAEEKAAPAAKADGK"
     gene            6085..6279
                     /locus_tag="WHR07_000899"
     CDS             6085..6279
                     /locus_tag="WHR07_000899"
                     /inference="COORDINATES: protein motif:HMM:NF024834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c5 family protein"
                     /protein_id="HEZ2130128.1"
                     /translation="MPGIPHVGIKADWADRIKKGKDTLHKHAIEGFNTMPAKGGRGDL
                     SDDEVKAAVDYMVNQSGGKF"
     gene            6481..7890
                     /locus_tag="WHR07_000900"
     CDS             6481..7890
                     /locus_tag="WHR07_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEZ2130129.1"
                     /translation="MDTQIKTEAGQQNNRRYLTVWRWHFYAGLLVMPFLTLLAVTGLG
                     MLLFANITGKEGERIHVVPQATVQPLSVQAEAARSAVNPETSSVVQYIAPRADDMVAV
                     FRVNNEGKATMVAVDPYTAKVVSTMPRNQGWYYAMDEIHSDMMLGSTGDYLLETAASL
                     TIIMIISGLYLWWVKRRGIKAMLLPPKGRARSWWRNLHGAFGTWVSLILLLFCLSGIA
                     WAGIWGGKFVQAWSQFPAGKWGVEPNPVSVVPTHGEVLNDGKVKEVPWILELTPMPVS
                     GTTVGKDGINPDEPMTLETVDRFAREIGFKGRYQLNLPKGEDGVWTLSQDSMSYDMIS
                     PFADRTVHIDQYSGKILADIRFDDYNPFGKFMAASIALHMGTLGWWSVLANVVFCLAV
                     IFIGISGCVMWWKRRPSGAVGMVPPAQKIKLPVWWAMAVPLLLIALLFPTALLAIAVI
                     WLLDTLLLSRIPVLRRWFK"
     gene            7991..11200
                     /gene="recC"
                     /locus_tag="WHR07_000901"
     CDS             7991..11200
                     /gene="recC"
                     /locus_tag="WHR07_000901"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HEZ2130130.1"
                     /translation="MFYLYQSNRLETLAALFARIQKVKPLKSVLQPEQIIVQSQGMRR
                     YLNTCLARDLGVAANLSFSLPAGLTWKLMKKLIPGIPELSPFAPEVMRWRLLDLFRSE
                     AFRNTAEFEDVRNVLQDYLGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQQGRILS
                     LGDDEIWQSKLWRYLDDGRQSAPHRVALWEKLLESLSSDKLPERYFVFGISTMAPMYL
                     QLLHKLSEHCDVFVFALNPSGMYWGNVIEAAQILKGGGDPDLTQAGHPLLASLGKQGR
                     DFFDFLNEMEIEGETPVFEEGGRDTLLHALQTDIQNLKMPSENVGSVNTGDGSIRIVS
                     AHSPLRELQILKDKLLKILHEHPDWQPHDIAVLTPNIESYTPFIEAVFGQAQPGAQAL
                     PYSVSDVKISRRQPLFHALSCLFDLLESRFEVDKVLVLLETAPVLRRFGLTEDDLPLL
                     HDMVADLNVRWGLDGEMRGGTDQLFTWKQAVERMILGWMLPEGGNPMWQDVSAWYADV
                     NQTALFGRFAALLETLSDIVRIWQQPATVGEWVARCRDLLETLFQTEADDQKAVQNLE
                     NEWVKWQAETELAQFSGQLPPHTVIRHIRRFLDSESEAGFLRGGITFCSMVPMRSLPF
                     KVICLLGLNDGDFPRNTKAAVFDLIAKHPAKGDRARRDDDRYLFLEALISAREILYLS
                     YIGRDIRKDEELAPSSLLGELIDTVAAMAGIGSRQLAQNLIEQHPLQAFSRRYFQEGG
                     RSDGIFGTRTDYAAALGQTPEPPQPFFDQSVENAEPVAEIGQDEFIRFWRNPVKVWLQ
                     QQLAWSEPHIGEAWEPAEPFEPQHADQIAETYIEARREGRDFAQTAARIGAESLLPSG
                     ELGRLWQQDFQTAAKQIDTAVLNSPKLPPLSYAIPSDGQILKGSLSNLYQCGQVFYAY
                     GKPNAPQRIAFLLEHLIFCAVMPSEAETRQTFIVQSGETEILAEIAQDRALQLLSEWM
                     AFFNIGQNRPLPFFAKTSLAAAEAFAQKQDWEAALKKAQTAYHGSKVSKGQKDYTEVA
                     LVFGNASQNPLEQPLFENLVRLLADTFAAAEKKEEAGAA"
     gene            complement(11270..12838)
                     /gene="mtrF"
                     /locus_tag="WHR07_000902"
     CDS             complement(11270..12838)
                     /gene="mtrF"
                     /locus_tag="WHR07_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041421321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbgT family antimetabolite efflux transporter
                     MtrF"
                     /protein_id="HEZ2130131.1"
                     /translation="MSQTDTQRDGRFLRTVEWLGNMLPHPVTLFIIFIVLLLIASAAG
                     AYFGLSVPDPRPVGAKGRADDGLIHVVSLLDADGLIKILTHTVKNFTGFAPLGTVLVS
                     LLGVGIAEKSGLISALMRLLLTKSPRKLTTFMVVFTGILSNTASELGYVVLIPLSAII
                     FHSLGRHPLAGLAAAFAGVSGGYSANLFLGTIDPLLAGITQQAAQIIHPDYVVGPEAN
                     WFFMVASTFVIALIGYFVTEKIVEPQLGPYQSDLSQEEKDIRHSNEITPLEYKGLIWA
                     GVVFVALSALLAWSIVPADGILRHPETGLVSGSPFLKSIVVFIFLLFALPGIVYGRVT
                     RSLRGEQEVVNAMAESMSTLGLYLVIIFFAAQFVAFFNWTNIGQYIAVKGATFLKEVG
                     LGGSVLFIGFILICAFINLMIGSASAQWAVTAPIFVPMLMLAGYAPEVIQAAYRIGDS
                     VTNIITPMMSYFGLIMATVIKYKKDAGVGTLISMMLPYSAFFLIAWIALFCIWVFVLG
                     LPVGPGAPTFYPAP"
     gene            13172..13384
                     /locus_tag="WHR07_000903"
     CDS             13172..13384
                     /locus_tag="WHR07_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130132.1"
                     /translation="MKNEIQKIMDKYNPWYEDDFESYEDIAKDVSLMTDKTFIEHYLL
                     EVYSEENGHFDQENVHAMIEEIKNAI"
BASE COUNT         3348 a         3214 c         3554 g         3273 t
ORIGIN      
        1 actgtaaaaa cggagaagga cagaggacgg cagtaaggtt tgccgtcctc tttttcaagt
       61 tgcggtggaa tgccgcttga aggtgtggtt taaacgtttc ggcttgtaat cagacgcggg
      121 cgttgtccag ccgctctctg aagttttcca aatttacgcc tgccgcttgg gcgcggcgga
      181 tgatttcgtc aaccggcata ccttctgccg cccggcggaa gccccacagg agggagcagc
      241 gcgtaccggt ccggcaatag gcaaggacgg gatattcggc ttgtccgatg agttggcgga
      301 aggtttcgac atcgtgtttt tggatgtcgc gtgcggtaac gggttggtga tggaatccag
      361 taacgcctgc ttgttccagc cactgtttga tttgggcgaa gtcgggttgc gattcttctt
      421 cgcggtcggg gcggttgcag atgacggttt tgatgcccag ttgcgcgatt tgttccgcat
      481 cggctttggt cagttgcgga gaaatataga ggtgttcgtc aagtttcaga atggccattt
      541 tgtttccttt actttgcggt tgtttttcag acggcatttt gtgtgcaatg ccgtctgaaa
      601 gtttaaccga acaaccagtt gtccaacagg ttccggtctg tgatatgtag gatggcagta
      661 tccgctgccg ctgcctgaac cgtcaagacg gtttgacgca atatgccggc acggaagaag
      721 tggatattga tttttgcatt gacgtggtat cgggcccatt gtgcggtaaa gtcggtgcag
      781 gcataaccgt ctaaagcaat gattttgtct tgcgggcaca gtgccgcaga ttccgcgctg
      841 ccgctgttga agacatgggt caggacgatg tggtcggtgt tttgtttgaa acgtgcgcca
      901 aaatcgcctg ccggcgggac ggggcagatg tgttctgcgt atccgccgcc gtgttgtcgg
      961 ggaagtggca ggaaggtcag tcccacgcct gcggttgcca ggcattcggc aagcggcaaa
     1021 tcttcggtac tgtataacgc tttttggaaa aaatcttcca aatccaagcc ggtaatttcc
     1081 tgacagcgga tttgccagtg tttttccgga atacccgagt gtgtgtccct ccactcccga
     1141 tagagtttgt ccattaacgt atcgagagaa tgtctgccgt tgcttcggtt gcgtattatc
     1201 agatcaaggc acaatgcggc aagcgcgcct ttctggtagt agctgacgat ggcgttgggg
     1261 ctgttttcat ccggtttgta aaatttgttc cacgcggtaa aactcgattc cgccaaggtc
     1321 tgcctcaaac ggccgcgggt ttgttgtacg cgcgtaatgc cttgtgccag caggtttaaa
     1381 taagattcgg gcgagatggt gcggctgcgt gccaaaaaca aatcgtcgta ataggatgta
     1441 ataccttcga atgcccatag ttgttcggta tagttttctt tgtcgaggtc ataagggacg
     1501 aacgcggcag gtttgatgga tttgacgttc cacgcgtgaa aatattcgtg ggagaaaagt
     1561 ccgagcaatg tggtgtaggt atcgtcggca tcggtcatac cgtacggcgg aaggctgtgg
     1621 cggtcggcga gcagggcggt gctgtcggtg tgttccaaac cgccgtaaat atggtcgccg
     1681 acgtggagca ggaacaaata tttttgaaac ggggcagggg aggaaaacac cgccagttct
     1741 gtttcgcaga tttttttgat atccgaaacc agcctgttgc ggtcgaaatc gggatatatg
     1801 ccgcttaagg caattgtgtg cggaatgcct gccgcctcaa aatctaaaaa ttcaatcaag
     1861 cccatctcga caggtcggtc aatcaattcg gcataagatg ccgcctgaaa gacaaacctc
     1921 cctgtttccg gcagcgttgt ggcaatacgc cattcggacg gaatacccgt caattccaag
     1981 cggtgcggca gcgtttccgt tccttcgact ttcaaaaaca ggcacgatcc gtcaaaaaaa
     2041 ccgcgttctg tcgtcaggaa agaacctcga accgacaaat cgaatgcata tacggtgtag
     2101 cggatttgcc actcgccgcg tacggcggca gcgtgccagc ggttttttgc aatttgttcg
     2161 agcggcatgg acgtgccgtt acaggatgca tggatagaag tgatgtggcg ggaaaaatcc
     2221 cgaatcagat agctgcccgg tacccaattc ggcaggctta tttctatagg aagatcatca
     2281 tcttgtgtga atgtcagcag gatgtgccac tcgtggtcga gaggggacgg ggttatttta
     2341 taatgaatca taactatcaa atatatcgtt aaacgggatg gattaaatac ctttaaaatg
     2401 cagcttaacc tacatcaata aagtgccaca aaaagggaaa attggaaaca aaagcaatgg
     2461 cggtcgggtt gtaatttatt ataacaatat gatttatatg taataaaaaa cagattaagc
     2521 aaagggctcg tcggcggcgc gaatgtaatt ccgcttggcg taataaggca gatatgttaa
     2581 atttagaaaa aattacgctt gcccggattg caccttaaac aggctgcgga agcggcagga
     2641 taaaaatctt tattcccata aattcatgga gactctcatg gacacacaaa cttacaacta
     2701 caaagtggtg cgccagttcg ccatcatgac tgtagtttgg gggattgtgg gtatgttggt
     2761 cggcgttatc gtcgccgccc agctttttgc tcctgccctc gacttgtcta atatcggacc
     2821 ttggttccac ttcggccgcc tgcgtccgct gcacaccaat gcggttattt tcgcatttgg
     2881 cggttgtggc ctgatcggca catcatacta cgttgtccaa cgtacttgta atacccgtct
     2941 tttcggcggt tggctgccgg catttacctt ttggggctgg caggcggtaa tcgttgccgc
     3001 cgtcgtcagc ttccctatgg gttggaccca aggtaaggaa tatgccgaac tggaatggcc
     3061 gatcgatatt ctgattactt tggtttgggt ggcttacgcc atcgtattct tcggtacgat
     3121 tgccaaacgt aagattaaac atatttacgt tgccaactgg ttctacggcg gctttatttt
     3181 ggcggtcgca cttttacaca tcgtcaacaa tatcagcatc ccggccggtt tgatgaagtc
     3241 ataccccgtc tattccggtg cgattgatgc tatggttcaa tggtggtacg ggcataacgc
     3301 cgtgggcttc ttcctgactg ccggcttctt gggtatgatg tactatttcg tacccaaaca
     3361 agcagcccgc cccgtttact cctaccgcct gtccgtcgtt cacttctggg cgttgatttt
     3421 cacctatatg tgggcgggtc cgcaccatct tcactacact gcgctgcctg actggacgca
     3481 atctttgggt atggttctgt ctttgattct gttcgcaccc tcttggggcg gtatgattaa
     3541 cggcatcatg accttgtccg gcgcgtggga caaactgcgt acagacccga ttcttaaatt
     3601 cctgattgta tccttgtcct tctacggtat gtctaccttt gaaggcccga tgatgtcgat
     3661 taaaacggtc aatgcattga gccactatac ggactggacc gtcgcgcacg ttcatgcggg
     3721 tgcgttgggc tgggtaggct ttgtaaccat cggttccgtc tattacatga ttccccgtct
     3781 gttcggcaaa gaacagatgc acagcaccaa gctggtagaa gcacattttt ggattgcgac
     3841 catcggcgtg gttctgtata tcgctgccat gtggattgcc ggtgtgatgc agggtttgat
     3901 gtggagttct ttgaacgatg acggtacgct gacctactcg tttgtcgaat ccgtaaaacg
     3961 caccatgcct tactacgtga tccgttttgc aggtggttta ttgtatctga gtggtatgtg
     4021 cattatggcg tacaacgtgt accgcacagc catcggtggt aaagcagtcg atgccgaaat
     4081 ccctgcggtt tcccaaacac agcaccacta aaatactaag aaagataggc taccaaaatg
     4141 aaattacaac aattggctga agaaaaaatc ggcgttctga ttgtgttcac gctgcttgta
     4201 gtcagtgtcg gtctgttgat tgaagttgtg cccttggcct ttaccaaggc ggcaacacag
     4261 ccggcgccgg gcgtgaagcc ttacaatgcc ctgcaggttg ccggacgcga tatttacatc
     4321 cgtgagggct gttacaactg ccactcgcaa atgattcgtc cgttccgtgc ggaaaccgag
     4381 cgttacggtc attactctgt tgccggagag tcggtttacg accatccgtt ccaatggggt
     4441 tccaaacgta ccggtcctga tttggcacgt gtgggcggtc gttattccga cgaatggcac
     4501 cgtatccacc tgctgaatcc ccgtgatgtc gtgcctgagt ccaatatgcc ggcattcccg
     4561 tggcttgcac gcaataaagt cgatgtcgat gcaaccgttg ccaacatgaa ggctttgcgt
     4621 aaagtaggta ctccttacag tgatgaggaa attgcgaaag cgcctgaggc tttggcaaac
     4681 aaatccgagc tggatgctgt agtcgcctat ctgcaaggat tgggtctggc tttgaaaaac
     4741 gtaaggtaac atcatggata ttaacggtat tcgtgctctc ttcacggtat ggatctttat
     4801 ctgtttcctg ttggtactct atatcgtctt caacaggcgg aataagaaaa actacgataa
     4861 tgccgcaaac agcatttttg atgaaaacca agatgcgcaa gataagaaaa gcgaaaaccg
     4921 ttaatattgt gataacggag caaaacaatg aacacaacat cccaatttac cagtaatttc
     4981 tggaatatat atattgcagt tattgtctta ctgagcttta tcgctttggc ttggctgctg
     5041 ctgtctcaaa atgttgtcaa acgtccgaag aagggcgaag aagtacaaac tacgggtcat
     5101 gagtgggacg gcattgccga atacgacaat ccgctgcccc gctggtggtt ttggctgtgt
     5161 gttttgacgt ggctgttcgg tatcggttat ctggttatgt atccgggtgt cggcgactac
     5221 aaaggtctgc tgaaatggac cagccataac caatatgaaa aagaggtcaa aaaagccgat
     5281 gagcaatacg gcaaactgta tgccaagttt gcggatatgc cgattgaaaa agtggcaaaa
     5341 gaccctcaag ccaagcaaat cgcccaaaac ctgtttaaca cttattgtat ccagtgccac
     5401 ggctctgatg ctaaaggctc taaaggtttt ccgaatctga ccgatagcga ttggttgtgg
     5461 ggcggtgatc ccgataaaat ccacgagacc atcgaaaaag gccgtgttgc gactatgcct
     5521 gcctggggtc ctgctttggg cgaagaaggc gtgaaagacg ttgcccatta tgtgatgtcc
     5581 ctttcaaaac ccgaaggtca gtatgatgag gaacgtgccg cgcgcggaca agccttgttc
     5641 agcggtccgc ctgccaactg tttcacttgc cacggcgata agggacaagg tatccaaggt
     5701 ttgggtccga acctgactga tgacgtgtgg ttgtggggcg gtacgcaaaa atccattatc
     5761 gaaaccatta ccaacggtcg cagcagccaa atgcccgctt ggggacattt cttggataaa
     5821 gacaaactgc atattatgac tgcttatgta tggggtcttt ccgataaaga cggtaaagct
     5881 ccggtgaaaa aagccgagcc tgcaccgact cccgcaccgg cggcagaacc cgcagcctct
     5941 gctcctgcag aagcagcaca agccgtgtcc gaagccaaac ctgccgcagc agaacctaaa
     6001 gccgaggaaa aagccgcacc tgctgccaaa gcggacggca aataggttta tgaaaccgtt
     6061 tgtgccgcct gccatggcaa tgcaattccg ggtattcccc atgtaggcat caaagccgat
     6121 tgggccgacc gcatcaaaaa aggcaaggac acgttgcaca aacacgcgat cgaaggtttc
     6181 aatacgatgc ccgcaaaagg cggtcgcggc gatttgagcg atgatgaggt taaagctgcg
     6241 gttgactata tggtcaacca gtcaggcggc aaattctaac ttgactgagt ttccgatatt
     6301 atcggttatg aaaatccaga ttcagtattg aatctggatt ttttgtttta acgggcatcc
     6361 ggttttaaac gcagactgcc tatttgttgt aatgaatttt gactttagtc ataaagaatt
     6421 agtctttatt gtttataatc gcgcatcatc acgatagccc tattttcaaa aggacgatta
     6481 atggatacac aaatcaaaac tgaagccggt cagcagaata accggcgtta tctgaccgtt
     6541 tggcggtggc atttttatgc cggtctgctg gttatgcctt ttcttaccct gcttgccgtt
     6601 acgggtttgg gtatgctgct gtttgccaat attaccggta aggagggcga gcggattcat
     6661 gttgtgccgc aggcaacggt acaacctctg tctgttcagg cggaagcggc acgcagtgcc
     6721 gttaatccgg aaacttcgtc cgtcgttcag tatattgcgc cgcgtgccga tgatatggtt
     6781 gccgtgttcc gtgtcaacaa tgagggtaag gcaacgatgg tcgcggtcga tccttatacg
     6841 gcaaaagtgg tcagtaccat gccgcgcaat cagggttggt attacgcgat ggatgaaatc
     6901 cacagcgata tgatgctcgg ttcgacaggt gattatcttt tggaaacggc tgcatcgctg
     6961 acgattatca tgataatcag cggtttgtac ctttggtggg tgaaacggcg cggcatcaag
     7021 gcgatgctgc tgccgccaaa aggcagggcg cgttcttggt ggcggaatct gcacggcgcg
     7081 tttggaactt gggtgtcgtt gattttactg ttgttctgcc tgtcgggtat tgcttgggca
     7141 ggtatttggg gcggcaagtt cgtgcaggct tggagtcagt tcccggcagg caaatggggt
     7201 gtcgaaccga accctgtttc agtcgtgccg acccatggcg aggtattgaa cgacggcaag
     7261 gttaaggaag tgccgtggat tttggagctt acgcctatgc ctgtttcagg gacgactgtg
     7321 ggcaaagacg gcattaaccc cgacgagccg atgacattgg aaaccgtcga ccgttttgcg
     7381 cgggaaatcg gtttcaaagg gcgttatcag ttgaatttgc ccaaaggcga ggacggcgta
     7441 tggactttgt cgcaagactc tatgagttac gatatgatta gtccgtttgc cgaccgcacg
     7501 gtgcatatcg accagtacag cggcaagatt cttgccgaca tccgttttga tgattacaac
     7561 ccgttcggca aatttatggc ggcgagcatt gcgctgcata tggggacttt gggctggtgg
     7621 agcgtgttgg cgaacgtcgt gttctgcctt gccgtcattt ttatcggtat cagcggctgc
     7681 gtgatgtggt ggaaacgccg tccgtccggc gcggtgggca tggttccgcc ggcgcaaaaa
     7741 atcaagctgc ccgtctggtg ggcaatggcg gtgccgctgc tgctgattgc attgcttttc
     7801 ccgaccgcgc tgcttgccat tgccgtgatt tggctgttgg atacgctgct gttgtcgcgg
     7861 attcctgttt tgaggagatg gtttaaatga ccaaatgccg tctgaaaggt tcagacggca
     7921 ttttgtttga aggcggacgg gggaaaggct atataatccc gaatactttt ccgcaacttt
     7981 tgtcgaaatc atgttttatc tgtatcaatc caaccgtctt gaaacgctgg cggcattgtt
     8041 tgcccgcatt caaaaagtca aaccgctgaa atcggtttta cagcccgaac agattattgt
     8101 gcagagtcag gggatgcgcc gctacctcaa tacctgcctc gcccgcgatt tgggcgtggc
     8161 ggcgaatttg tcgttcagcc tgcccgccgg tctgacgtgg aagctgatga aaaaactgat
     8221 tcccggtatt ccggaactca gcccgtttgc gcctgaagtg atgcgctggc ggctgttgga
     8281 tttgttccgc agcgaggcat ttcggaatac ggcagaattt gaagatgtga ggaatgtgct
     8341 gcaagactat ctaggcagcg gcgaatcggc agattatcag cttgcgggac agcttgcgga
     8401 catattcgac caataccttg tctatcgtcc gcagtggata gacgcgtggc agcagggcag
     8461 gatactcagt ttgggcgacg atgaaatctg gcagtccaaa ctgtggcgtt atcttgatga
     8521 cggcaggcag agcgcgccgc accgtgttgc gttgtgggaa aagctgttgg aatctttgag
     8581 cagtgataag ctgcccgagc gttatttcgt gttcggcatt tccactatgg cgccgatgta
     8641 tttgcagctt ttgcacaagc tgtccgaaca ttgcgatgtg ttcgtgtttg cactcaatcc
     8701 gagcgggatg tattggggca acgtcatcga agcggcgcaa atcctcaaag gcggcggcga
     8761 tcccgattta actcaggcag ggcatccgct gctcgcctca ttgggcaagc aggggcgcga
     8821 ctttttcgac tttttgaacg aaatggaaat agaaggcgaa acgccggtat ttgaagaagg
     8881 cggacgcgat acgcttttgc acgccctgca aaccgatatt caaaacctga aaatgccgtc
     8941 tgaaaatgtg ggaagcgtca acacgggcga cggctcgata cgcatcgtct ccgcacacag
     9001 ccccttgcgc gaattgcaga tactcaaaga caagctgttg aaaattctgc atgaacatcc
     9061 cgattggcag ccgcatgata tcgccgtatt aaccccgaac atcgaatcct atacgccttt
     9121 tatcgaagcc gtgttcggac aggcgcagcc cggtgcgcag gcattgccgt attccgtttc
     9181 agacgtgaaa atcagccgcc gacaaccgct gtttcatgct ttgtcatgcc tgttcgactt
     9241 gttggaaagc cgatttgaag tcgataaagt gcttgtgctt ttagaaaccg cacccgtgtt
     9301 gcgccgtttc ggactgactg aggacgattt gccgcttttg cacgacatgg ttgccgattt
     9361 gaacgtccgc tggggtttgg acggagaaat gcgcggcggc acggatcagc tgtttacctg
     9421 gaagcaggcg gtagaacgca tgatattggg ctggatgctg cccgaaggcg gcaatccgat
     9481 gtggcaggat gtcagcgcgt ggtatgccga cgtgaaccaa accgccctgt tcggacgttt
     9541 tgccgccctc ctcgaaaccc tgtcggatat tgtacggata tggcagcaac ctgcgacggt
     9601 cggcgaatgg gtggcgcgtt gccgggattt gcttgaaaca ttgttccaaa ccgaagccga
     9661 tgaccaaaag gcagtccaaa acctcgaaaa cgaatgggtc aaatggcagg cggaaaccga
     9721 attggcgcaa ttttccggac agttgccgcc gcacaccgtc atccgccaca tccgccgctt
     9781 tctcgacagc gaaagcgagg caggcttttt acgcggcggc atcacctttt gcagtatggt
     9841 gccgatgcgg agcctgccct ttaaagtcat ctgcctgttg ggtttgaacg acggagattt
     9901 tccccgcaat accaaagccg ccgtattcga cctgattgcc aaacatcccg ccaaaggcga
     9961 ccgcgcccgc cgcgacgacg accgctacct cttcctcgaa gccctcatca gcgcgcgtga
    10021 aatcctgtac ctgtcctaca tcgggcgcga catccgcaaa gacgaagaac tggctccgtc
    10081 ttctttgttg ggcgaactca tcgataccgt tgccgctatg gcgggcatcg gtagccgcca
    10141 acttgcacaa aacctgatag aacagcatcc gctgcaagcc ttctcgcgcc gatattttca
    10201 agaaggcgga cgttcagacg gcatattcgg cacgcgtacc gactacgccg ccgcgctcgg
    10261 acaaacgccc gaaccgccgc aacccttttt cgaccaatcc gtagaaaacg ccgaacctgt
    10321 tgccgaaatc ggacaggacg aatttatccg cttctggcgc aaccccgtca aagtatggct
    10381 tcagcagcag cttgcgtgga gcgaacccca tatcggcgaa gcttgggagc ctgccgaacc
    10441 cttcgagccg caacacgccg atcaaatcgc cgaaacctac atcgaagcac ggcgcgaagg
    10501 acgggatttt gcccaaaccg ccgcccgcat cggggcggaa agcctcctgc cgtcgggaga
    10561 gttgggcaga ctttggcagc aggacttcca aaccgctgcc aaacaaatcg acacggcggt
    10621 tttaaacagc cccaaactgc caccgctttc atacgccata ccgtcggacg ggcaaatcct
    10681 gaaaggcagt ttgagcaatt tataccaatg cggacaagtg ttttacgcct acggcaaacc
    10741 caacgcgccg caacgtatcg cttttctgct ggaacacctg atattttgcg ccgttatgcc
    10801 gtctgaagcc gaaacgcggc aaacctttat cgtccaatcc ggagaaaccg aaatattggc
    10861 ggaaatcgcg caagacaggg cattgcagct attgtcggaa tggatggcgt ttttcaatat
    10921 cgggcaaaac cgcccgctgc cgttttttgc caagacctcg cttgccgctg ccgaagcgtt
    10981 tgcccaaaaa caagattggg aagccgccct gaaaaaagcc caaaccgcct accacggcag
    11041 caaagtcagc aaagggcaga aagactatac cgaagtcgcc ctcgtgttcg gcaacgcaag
    11101 ccaaaaccca ctcgaacaac ccctgtttga aaacctcgtc cgtctgcttg ccgacacgtt
    11161 tgccgcagcg gaaaaaaagg aagaggccgg agcagcctga cgggatggaa aggcaaatgc
    11221 cgtctgaaaa cagcaaaaag gttttcagac ggcattttgt ttatcgtgtt taaggtgcgg
    11281 gatagaatgt gggcgcgccg ggaccgacgg gcaggcccaa aacaaatacc caaatgcaga
    11341 ataaggcaat ccacgcaatc aagaagaaag cggaatacgg caacatcata gaaatcagcg
    11401 tacccacgcc cgcatctttt ttgtatttga ttaccgtcgc cataatcagc ccgaaataac
    11461 tcatcatcgg cgtaataata ttggtaacgg aatcaccgat gcggtaagcg gcttgaatga
    11521 cttcgggcgc gtagccggcc aacatcagca tagggacgaa aatcggcgca gttaccgccc
    11581 attgcgcgga ggcggagcct atcatcagat tgataaaagc acaaattaaa ataaaaccga
    11641 taaacaacac gctgccgccc aagccgactt cttttaagaa cgtcgcccct ttaacggcaa
    11701 tatattgccc aatattcgtc caattaaaaa atgcgacaaa ctgtgcggca aaaaagatga
    11761 tgaccaaata aagccccaga gtactcatcg attcggccat cgcattaacg acttcctgtt
    11821 cgccgcgcaa acttcgggtt acccggccat aaacaatgcc cggcagtgca aacaacaaga
    11881 aaataaaaac aacaatcgat tttaaaaacg gcgaaccgga aaccaatcct gtttcaggat
    11941 gacgcaaaat accgtcggca gggacgatgc tccaagccaa tagggcggat aaggcaacaa
    12001 acaccacgcc agcccaaatt aatcctttat attccaaagg cgtgatttca ttggaatgcc
    12061 gaatgtcttt ttcttcttgt gacaaatctg attgataagg gcccaattgc ggttcgacga
    12121 ttttttcagt aacaaaataa ccaatcaaag caatcacaaa cgtactggct accataaaaa
    12181 accagttggc ttcagggcct acgacgtagt cgggatggat gatttgcgcc gcctgttggg
    12241 tgatgcctgc caagagcgga tcgattgtgc ctaagaacag attggccgaa taaccgcccg
    12301 aaacgccggc gaaagccgca gccagaccgg caagcggatg gcggccgagg gaatgaaaga
    12361 tgatggcgga caaagggatt aggacgacat agcccaattc agaagcggta ttagataaaa
    12421 tccctgtaaa aacaaccata aaagtagtga gtttgcgtgg cgattttgtg agcaataagc
    12481 gcattaatgc ggaaatcaag cccgattttt ccgcaatccc cacgcccaat aaagaaacca
    12541 acaccgttcc caacggcgcg aaaccggtga aatttttaac ggtatgcgtc aggattttga
    12601 tcaaaccgtc agcatcgagc aggctgacaa cgtgaatcaa accgtcatcg gcacgtcctt
    12661 tcgcaccaac agggcgcgga tcggggacgg atagtccaaa atacgcaccg gcggcagagg
    12721 caatcagcaa taacacaatg aaaataataa aaagcgtaac cgggtgcggc aacatattgc
    12781 ccagccattc gactgtgcgt aaaaatcgtc cgtcccgttg cgtatcggtt tgactcatct
    12841 gcttctcctt aaaaaaaata tattgagtgc attaaatttt tgaatgtaac atgaagtgtt
    12901 ttgtaagcaa actaaaataa tcgtatatgt atataaccgt aatagattaa aacagaaaat
    12961 gcccacatcg ttattctcat aaaggcggta atccgaaaac ttgacgttaa agccttatca
    13021 ggaatgactg gaactcaaca aagcggtttc ccgctttcgc ggaaatggcg ggattttcgg
    13081 tttttgtttg caaaaatgcc ggagaaaaat gcagtttaca ttttgaatgg tattgttatt
    13141 aattgtaaat aaatattgga aggtaaatga tatgaaaaat gaaattcaaa aaatcatgga
    13201 caaatataat ccatggtatg aagatgattt tgagtcgtat gaagacattg ccaaagatgt
    13261 atcgctgatg acagataaaa cgttcattga acattatttg ttagaagttt attcagaaga
    13321 aaacggacat tttgaccaag agaatgtcca tgcaatgata gaagaaatta aaaatgcaat
    13381 ttagtgaat
//
LOCUS       DAWGKF010000045        13344 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.045, whole genome shotgun sequence.
ACCESSION   DAWGKF010000045 DAWGKF010000000
VERSION     DAWGKF010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13344)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13344)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13344
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.045"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(24..359)
                     /locus_tag="WHR07_000904"
     CDS             complement(24..359)
                     /locus_tag="WHR07_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEZ2130133.1"
                     /translation="MFGKAGLGGLMKQAQQMQENMKKAQAKLAETEIEGEAGNGLVKI
                     TMTCAHEVRKIDISPDLIQEAADDKEMLEDLILAALKSARGKAEETANKTMGAFTQGL
                     PPGVGDFFR"
     gene            complement(439..2568)
                     /gene="dnaX"
                     /locus_tag="WHR07_000905"
     CDS             complement(439..2568)
                     /gene="dnaX"
                     /locus_tag="WHR07_000905"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEZ2130134.1"
                     /translation="MAYQVLARKWRPKTFSDLVGQEHVVKALQNALDEGRLHHAYLLT
                     GTRGVGKTTIARILAKSLNCENAQHGEPCGVCESCTQIDAGRYVDLLEIDAASNTGID
                     NIREVLENAQYAPTAGKYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPH
                     KVPVTVLSRCLQFVLHNMTSQQVADHLAHVLDSEKIAYEPPALQLLGRAAAGSMRDAL
                     SLLDQAIAMGSGSVAEQDVRQMIGAVDKQYLYELLTGIINQDGAALTAKAQEMAACAV
                     GFDNALGELAILLQHLALIQAVPSALAHDDPDSDILHRLAQTISGEQIQLYYQIAVHG
                     KRDLSLAPDEYAGFMMTLLRMLAFAPLAAASCDTNAVIENTELKSPSAQTAEKETAVK
                     KPQPRPEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDAPDEAQAAAGTA
                     QTSAKSIQTASEAETPPENQVSKNKAADNVTDAPLSEVPSENPIQATPNDEAVETETF
                     AHEAPAEPFYGYGFPDNDCPVEDGAEIPPPDWEHAAPADTAGGGADEEAEAGGIGGNN
                     TPSAPPPEFSTENWAAIVRHFARKLGAAQMPAQHSAWTEYHPDTGLMVLAMTAEARAT
                     ADKKRLDKIRDTLAQAYGLQLTLQTQDWRDEAGRETPAMQDKRVQAEDRQKAQALLEA
                     DPAAQKILQAFGAQWQPESLELAANRP"
     misc_feature    complement(1340..1379)
                     /gene="dnaX"
                     /locus_tag="WHR07_000905"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01843"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="This ribosomal frameshift element is known only in
                     the genus Neisseria; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01843"
     gene            complement(2663..4639)
                     /gene="mutL"
                     /locus_tag="WHR07_000906"
     CDS             complement(2663..4639)
                     /gene="mutL"
                     /locus_tag="WHR07_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HEZ2130135.1"
                     /translation="MSRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAID
                     VELAGGGIRLIRVSDNGGGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLAS
                     IASVSRLTLTSRQEDSSHATQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKF
                     LKSEATEYAHCATMLERLALAHPHIAFSLKRDGKQVFKLPAQSLHERIAAIVGDDFQT
                     ASLEIDSDNGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH
                     NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKALADTRADLTE
                     SVSNAGEVLHDITGVTPAPMPSENNSENLFDRASNYPTGNKSDTHNAFGSSGKTAPMP
                     YQSAYAPQQRSLSLRESRAAMNTYAELYKKTDDIDLELSRFEQARFGNMPSETPAPQT
                     DTPLSDGIPSPSELPPLGFAIAQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQR
                     QENGNLQSQRLLIPVTFAASHEECAALADHAEALAGFGLELSDMGGNTLAVRAAPAML
                     GKSDVVSLARDVLNEFAQVGSSQTIEEHENHILATMSCHGSIRAGRRLTLPEMNALLR
                     DMENTPRSNQCNHGRPTWVKLTLKELDALFLRGQ"
     gene            4783..4968
                     /locus_tag="WHR07_000907"
     CDS             4783..4968
                     /locus_tag="WHR07_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3460 family protein"
                     /protein_id="HEZ2130136.1"
                     /translation="MYHYQSEATQFLNRLIEEKPELEQQRLENRGLLWDVELNPEEQE
                     NFEAAKVAKKPYTYYQD"
     gene            4979..5647
                     /locus_tag="WHR07_000908"
     CDS             4979..5647
                     /locus_tag="WHR07_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-methyltransferase"
                     /protein_id="HEZ2130137.1"
                     /translation="MTTHLSNVAPDLQNYLNAIGEPEHPVLMRLREKTGHHRMGKMAI
                     AREQAAVLVWLAKLIRAEKYLEVGVFTGYSSTALALALPEHGRITACDINVSFTDTAR
                     QVWNEAGVAHKISLHLQPALLTLDDLIVQGEAGSYDLALIDADKPPTPQYFERCLKLV
                     RQGGIIAIDNILLNGRVMREAASDAPPSVGILKDFNQNLPNDPRIVPITLPVGDGLTL
                     LLKK"
     gene            5647..6363
                     /locus_tag="WHR07_000909"
     CDS             5647..6363
                     /locus_tag="WHR07_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system YbgF family protein"
                     /protein_id="HEZ2130138.1"
                     /translation="MKTKLPLFIIWLSVSAACSSPVSRNIQDMRLEPQAEAGSSDAIP
                     YPVPTLQDRLDYLEGTLVRLSNEVETLNGKVKALEHAKTHPSSRAYVQKLDDRKLKEH
                     YLNTEGGSASAHTVETAQNLYNQALKHYKSGRFSAAASLLKGADGGDGGSIAQRSMYL
                     LLQSRARMGNCESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIARATWRSL
                     IQAYPSSPAAKRAAAAVRKR"
     gene            6412..6897
                     /gene="purE"
                     /locus_tag="WHR07_000910"
     CDS             6412..6897
                     /gene="purE"
                     /locus_tag="WHR07_000910"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HEZ2130139.1"
                     /translation="MTQIGIIMGSNSDWPVMRQAAQFLEEFGVEYEARVVSAHRTPDL
                     MFQYAETARARGIKAIIAGAGGAAHLPGMVAAKTTVPVLGVPVPSKYLRGEDSLLSIV
                     QMPKGVPVATFAIGEAGAANAALFAVSMLANENPELAQKLADFRAKQEQAVLSMELEQ
                     I"
     gene            complement(7080..8534)
                     /locus_tag="WHR07_000911"
     CDS             complement(7080..8534)
                     /locus_tag="WHR07_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HEZ2130140.1"
                     /translation="MTTQTIKFHMKPETFKQNAAISLQDKPLRKSLRTAMDMLMTKRK
                     AVLTDEEELQSLRDLCEHVRQRSLSKLPALLEQLEENLTKLGVKVHWAETPTEACQII
                     HDIITAKNGKLMVKGKSMVSEEIELNHYLEAKGIKAVESDLGEFIVQMAGEKPTHIVM
                     PAIHKTKEQVSELFHQNLGTPLTDDVDQLTGFARKALRDIYSTADVGLSGVNFAVAET
                     GTLCLVENEGNGRLSTTVPPVHIAITGIEKVVAKLSDIPPLYSLLPRSAIGQNITTYF
                     NMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRTLQCIRCGACMNHCPVYTRI
                     GGAAYGTTYPGPIGEIISPHLLGLDATRDLPTACTMCGACVEVCPVRIPITEQMQRLR
                     VEAQRSPTETVPHPILGQGASHTFGEQMAWRTFNGIFSGSKTYRAFGWAATKFRNLTP
                     RKQLGWTQNRVPMKPAKKTLHELMAEKMRQKEQA"
     gene            complement(8531..9232)
                     /locus_tag="WHR07_000912"
     CDS             complement(8531..9232)
                     /locus_tag="WHR07_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HEZ2130141.1"
                     /translation="MSARENILAKLKKADALPMEEPAVFDYYREMGVSWGSEVERLKH
                     WAAAMRAVKTEIYWVTKSNWMQVFREAAEGKGLKNILLPLATEHGQIARAALADSNIE
                     PIAFEREIDTWKTEFFTNIDAGFSGAQCGIARTGTLMLFSSPEEPRTLSLVPPVHFCL
                     FDTSKMYNEFHNAVEGEELVENGMPTNVFLISGPSKTADIQLTLAYGAHGPRDLVILA
                     ILPDHISPADLEENA"
     gene            complement(9229..10008)
                     /locus_tag="WHR07_000913"
     CDS             complement(9229..10008)
                     /locus_tag="WHR07_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HEZ2130142.1"
                     /translation="MSATIPPKIIRYDSNPTDVYFFGTCVLDLFMPEAGMDAITLIEQ
                     QGIRVHFPMAQSCCGQPAYSSGHPTEAFDVARAQLDLFPEEWPIVVPSGSCGGMMKHH
                     WPTLFKGSEYEERAVDCAGRIIEFTHFLLAIGFKPEDKGEPLKVAVHTSCAARREMNV
                     HLSGWQLIDGMENVERIVHDHESECCGFGGTFSVKQADISGAMVTDKVAALKETGATE
                     IISADCGCMMNIGGKIAKDEPNMPRPKHIASFLLERTGGKA"
     gene            10292..11698
                     /locus_tag="WHR07_000914"
     CDS             10292..11698
                     /locus_tag="WHR07_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ2130143.1"
                     /translation="MEKNTLSARAPSPWLPLLLAIAIFMQMLDATILNTALPEIAADL
                     NESPLNMQLAVISYTLTVALLIPLSGYLADRFGTKKVFFGSIAVFMLGSALCAASGSL
                     FELTLSRVVQGIGGSMLVPIPRLTILRVYDKSKLLNAINYAVMPALIGPVLGPLAGGY
                     LVEYASWHWIFLLNLPIGLLGFILGRNIMPDIKGSNISLDFKGYLIFSAAACLLLLSA
                     ESLSHALPPYFALLPLCGGLLFARRYFRHMKTASKPIYSADLFLIRTFRLGLAGNLFS
                     RLGISSIPFLMPLMFQVAFGFGASLSGWLVAPVALSSLLVKPLIAPLMKRFGYRTVLL
                     WNTKLLAAFIMLLALPDGNSPLWIWIFLSLAIGACNSLQFSAMNTLTLADLRPQQTGS
                     GNSLMAVNQQLAISMGIVVGALILKNWTFLIPASSGLHSAFRMTLLSIGGITLASSLV
                     FKRLHVSDGANLTRNTPS"
     gene            11810..13336
                     /locus_tag="WHR07_000915"
     CDS             11810..13336
                     /locus_tag="WHR07_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HEZ2130144.1"
                     /translation="MKTRSLISLLCLLLCSCSSWLPPLEERTESRHFNTSKPVRLDNI
                     LQIRHTPHTNGLSDIYLLNDPHEAFAARAALIESAEHSLDLQYYIWRNDISGRLLFNL
                     VYLAAERGVRVRLLLDDNNTRGLDDLLLALDSHPNIEVRLFNPFVLRKWRALGYLTDF
                     PRLNRRMHNKSFTADNRATILGGRNIGDEYFKVGEDTVFADLDILATGSVVGEVSHDF
                     DRYWASHSAHNATRIIRSGNIGKGLQALGYNDETSRHALLRYRETVEQSPLYQKIQTG
                     RIDWQSVQTRLISDDPAKGLDRDRRKPPIAGRLQDALKQPEKSVYLVSPYFVPTKSGT
                     DALAKLVQDGIDVTVLTNSLQATDVAAVHSGYVKYRKPLLKAGIKLYELQPNHAVPAT
                     KDKGLTGSSVTSLHAKTFIVDGKRIFIGSFNLDPRSARLNTEMGVVIESPKIAEQMER
                     TLADTTPKYAYRVTLDRHNRLQWHDPATRKTYPNEPEAKLWKRIAAKILSLLPIEGLL
                     "
BASE COUNT         2708 a         3607 c         3759 g         3270 t
ORIGIN      
        1 tgcgtgggaa tgacggtcgg gtatcagcgg aagaagtcgc ccactccggg gggtagacct
       61 tgcgtgaatg cgcccattgt tttgtttgcg gtttcttcgg ctttgccccg ggcggatttg
      121 agggcggcga ggatgaggtc ttcgagcatt tctttgtcgt cggcggcttc ttgaatcaaa
      181 tcggggctga tgtcgatttt gcgtacttcg tgcgcgcagg tcattgtgat tttgaccagg
      241 ccgttgcctg cttcgccttc gatttcggtt tcggcaagtt tggcttgcgc ttttttcata
      301 ttttcctgca tttgctgcgc ctgtttcatc aggccgccta atccggcttt tccgaacata
      361 ctgaatactc ctgtctgttt tgattgaatg agggaaacgg caatgccgtc cgaagggttc
      421 gggcggcatt atatctgttt atggccggtt tgctgccaat tccagtgatt cgggctgcca
      481 ttgcgcgccg aatgcttgga ggattttttg tgcggcgggg tcggcttcga gcaatgcttg
      541 tgctttttgc ctgtcttcgg cttggacgcg cttgtcctgc atcgcggggg tttccctgcc
      601 ggcttcgtcg cgccagtctt gggtttgcag ggtgagttgc agtccgtagg cttgggcaag
      661 ggtgtcgcgg attttgtcga gacgtttttt gtcggcggtg gcgcgggctt cggcggtcat
      721 cgccaaaacc atcaggccgg tgtcgggatg gtattccgtc cacgcggagt gttgcgccgg
      781 catttgcgcc gcgccgagtt tgcgggcgaa atgccggacg atggctgccc agttttcggt
      841 ggaaaattcg ggcggcgggg cggacggcgt gttgtttccg ccgatgccgc ctgcttctgc
      901 ttcttcgtcc gcgcctccgc ctgcggtatc ggcaggggcg gcgtgttccc aatcgggcgg
      961 cgggatttct gcgccgtctt ctacggggca gtcattatcc ggaaagccgt aaccgtagaa
     1021 aggttctgca ggggcttcgt gtgcaaatgt ttccgtttca acggcttcat cattcggtgt
     1081 tgcctgaatg gggttttcag acggcacttc ggacaagggg gcatcggtta cgttgtcggc
     1141 tgccttgttc ttggaaactt ggttttcggg cggcgtttcg gcttcggatg ccgtctgaat
     1201 gctttttgcc gacgtttgcg ccgtgccggc tgcggcttgg gcttcgtctg gcgcgtcttc
     1261 ccaaggcgga acatcgttgt tttcttgatt ggaaacgggt ccggcagttt tgccttcaga
     1321 cggcattgcc gctgcggatg ccgtctgaac gggtgtttgg gcggtttctg cttcagggcg
     1381 cggttggggc ttttttacgg cggtttcctt ttcggcggtt tgtgccgatg gggattttag
     1441 ttcggtattt tcaatcacgg cgtttgtatc acacgaagct gccgccaagg gcgcaaacgc
     1501 cagcatacgc agcagggtca tcataaagcc ggcgtattcg tcgggggcga ggctcaggtc
     1561 gcgtttgccg tggacggcga tttggtagta aagctggatt tgttcgccgc ttatggtttg
     1621 ggcgaggcgg tgcaaaatat cggaatcggg gtcgtcgtgc gccaaggcgg agggcaccgc
     1681 ctgtatcagg gcgaggtgtt gcagcagtat ggcaagttcg cccaaggcgt tgtcaaagcc
     1741 gacggcacac gccgccattt cctgcgcttt ggcggtcagg gctgcgccgt cttggttgat
     1801 gatgcctgtc aagagttcgt aaaggtattg tttgtcaacc gcaccgatca tttggcggac
     1861 gtcttgttcg gcaacgctgc ccgaacccat ggcgatggct tggtcgagca ggctcaaggc
     1921 atcgcgcatc gatccggcgg cggcgcgtcc caaaagttgc agggcagggg gttcgtaggc
     1981 gattttttcg ctgtcgagga cgtgggcgag gtggtcggca acctgctgcg aagtcatatt
     2041 gtgcaagaca aattgcaggc agcggctcaa gacggtaacg gggactttat gcggatcggt
     2101 cgtggcaagg atgaatttga cgtgttcggg cggctcttcc agcgttttga gcatagcgtt
     2161 gaacgcgctt ttggaaagca tatgcacttc gtcgatgata tagactttgt atttgccggc
     2221 agtcggtgca tattgggcgt tttccaatac ttcgcggatg ttgtcgatgc ctgtgttgga
     2281 ggcggcgtcg atttcgagca ggtcgacata gcgtccggca tcgatttggg tgcagctttc
     2341 gcacacgccg caaggttcgc cgtgttgcgc gttttcgcag ttgaggcttt tggcaaggat
     2401 gcgggcgatg gtggttttgc ctacgccgcg cgtaccggtc agcaggtagg cgtggtgcag
     2461 cctgccttcg tccaaggcgt tttgcaaggc tttgacgacg tgttcctgac cgactaagtc
     2521 ggaaaaggtt ttgggccgcc attttcgggc gagaacttga taggccatgt ttttctcttg
     2581 gtttcggtcg tgatgtttct gtcggtgcgt cggaatgccg tctgaacggc ggcttcgggc
     2641 ggcgtattct agcactttcg gtttattgtc cgcgcaagaa cagtgcgtcc aattctttca
     2701 aagtcagttt gacccaagtc ggcctgccgt ggttgcactg gttgctgcgc ggcgtatttt
     2761 ccatatcgcg cagaagggcg ttcatttcgg gcagggtgag ccggcggccg gcgcggatcg
     2821 agccgtggca ggacatggtg gcgaggatgt ggttttcgtg ttcctcgatg gtttggctgc
     2881 tgccgacttg ggcgaattcg tttaatacgt cgcgggcgag ggagacgaca tcggatttgc
     2941 ccaacattgc gggtgcggcg cggacggcga gggtgttgcc gcccatatcg gacagttcca
     3001 gcccgaagcc tgccagtgct tcggcgtggt cggcaagggc ggcgcattct tcgtgggacg
     3061 cggcaaaggt tacgggaata agcaggcgtt ggctttgcag gttgccgttt tcctgacgtt
     3121 ggcgtttcat tttttcgtag ttgacgcgtt cggcggcggc gtgcatatcg atgagcaaca
     3181 ggctgtcttc ggcttgggca agaatgtaga tgccaagtaa ttgggcaatg gcgaaaccga
     3241 gcggcggcag ttcggatggg gacgggatgc cgtctgaaag cggcgtatct gtttggggag
     3301 caggcgtttc agacggcata ttgccgaaac gtgcctgctc gaatcggctt aactcaaggt
     3361 cgatgtcgtc ggtttttttg taaagttcgg cgtaagtatt cattgccgcg cggctttcgc
     3421 gcagggacag gctgcgttgt tgcggcgcat atgcggactg atagggcatg ggcgcggttt
     3481 tgcctgatga accaaaggca ttgtgtgtat ctgatttgtt gcctgtcggg tagttggatg
     3541 cgcgatcaaa cagattttcg ctgttgtttt cagacggcat tggtgcaggc gtaacgccgg
     3601 taatgtcatg caacacttcg cctgcgttgc tgacgctttc ggtcaggtcg gcgcgtgtgt
     3661 cggcaagggc tttgttgagc gtgtggaaca caagttggtg cacctgctga ctgtcgcgga
     3721 agcggatttc ggttttggtc gggtggacgt tgacatccac ggcttcgggc ggcaggtcga
     3781 gaaagaggac gaaagcaggc gtcagtgcgt tgtgcaatac gtcgcggtat gcctgcttga
     3841 cggcatggag catgactttg tcgcggacaa aacgatggtt gacgaagcag tattgtttgt
     3901 cggttttacc tttggcgaaa gtcggtttgg caatcgcgcc atagagccgc aatgcgccgt
     3961 tgtcgctgtc aatttccaat gatgccgtct gaaaatcatc gccgacaatg gcggcaatcc
     4021 gttcatgcag gctttgtgca gggagtttga acacttgttt gccgtcgcgt ttgagcgaga
     4081 aggcaatgtg cggatgcgcc agcgcgaggc gttcgagcat agtggcgcag tgggcgtatt
     4141 cggtggcttc agacttgagg aacttgcgcc gcgcaggggt attgaagaag agttcggcgg
     4201 cttcgatggt ggtgccgacg gggtgggcgg cggcggtggg gctgctgagt ttgccgtctt
     4261 cggctttgac ttgggttgcg tgcgaactgt cttcttgacg gctggtcagg gtcaggcggc
     4321 tgacggaggc gatgcttgcc aagccttcgc cgcgaaagcc catgctggca acgtgttcca
     4381 aatcgtttaa ggttttgatt ttgctggtag cgtgtcggtg gagcgcaagc tcgatgtcgt
     4441 cggggtggat accgccgccg ttgtcgctga cgcgaatcag gcggatgccg ccgcccgcca
     4501 gctcgacatc aatcgccgtt gcgcctgcat cgatactgtt ttcaacaatt tctttcaagg
     4561 cgttggcagg gcgttcgact acttcgccgg cagcgatttg gttgacaaga tggtcgggca
     4621 gggcggcaat tcgggacatg gcatgggctt ccgtttcaaa aaacgcttta ttctataata
     4681 aaacccctta tctttctgcc cgtattcttg ataaaagccg tttatcccgt ttggaaaata
     4741 ccagtataat cacgccgtat cccgtaaaat tggagcgcaa agatgtacca ctaccaatcc
     4801 gaagccacac aattcctcaa ccgcctgatt gaagaaaaac ctgagttgga acagcagcgt
     4861 ttggaaaacc gggggctttt gtgggatgtc gaactcaatc ccgaagaaca ggaaaacttc
     4921 gaggcggcaa aagtagcgaa aaaaccttat acctattacc aagactgaac ccgccgaaat
     4981 gacgacccat ctgtccaatg tcgcccccga cctgcaaaac tatttgaacg ccatcggcga
     5041 acctgaacat cccgttttga tgcggctgcg cgagaagacc gggcatcacc gtatgggcaa
     5101 aatggcgatt gcgcgcgaac aggcggcggt tttggtttgg ctggcaaagc tgatccgtgc
     5161 ggaaaaatat ctggaagtcg gcgtgtttac tggatacagc agcaccgcgc ttgcattggc
     5221 gttgcccgaa cacgggcgga ttaccgcctg cgacatcaat gtaagcttta ccgatacggc
     5281 gcgtcaggtt tggaacgagg caggtgtggc acataaaatc agcctgcacc tgcaacccgc
     5341 attgctgaca ttggatgatt tgattgtaca gggtgaagcc ggaagctacg atttggcact
     5401 gatagacgca gacaaaccgc ccacgccgca atatttcgag cgttgcctca aactcgtccg
     5461 gcaaggcggc atcattgcca ttgacaatat tttgttgaac ggaagggtga tgcgcgaagc
     5521 ggcttccgac gcgccgccca gtgtcggcat cctcaaagat ttcaatcaaa acctgccgaa
     5581 cgacccgcgc atcgtcccca tcaccctgcc cgtcggcgac ggtttgaccc tgcttctgaa
     5641 aaaataatga agaccaaatt accgcttttt atcatttggc tgtccgtatc cgccgcctgt
     5701 tcttcccctg tttcccgcaa tattcaggat atgcggctcg aaccgcaggc agaggcaggt
     5761 agttcggacg ctattcccta tcccgttccc actctgcaag accgtttgga ttatctggaa
     5821 ggcacactcg tccgcctgtc gaacgaagtg gaaaccttaa acggcaaagt caaagcactg
     5881 gagcatgcga aaacacaccc ttccagcagg gcatacgtcc aaaaactcga cgaccgcaag
     5941 ttgaaagagc attacctcaa taccgaaggc ggcagcgcat ccgcacatac cgtcgaaacc
     6001 gcacaaaacc tctacaatca ggcactcaaa cactataaaa gcggcaggtt ttctgccgct
     6061 gcctccctgt tgaaaggcgc ggacggaggc gacggcggca gcatcgcgca acgcagtatg
     6121 tacctgttgc tgcaaagcag ggcgcgtatg ggcaactgcg aatccgtcat cgaaatcgga
     6181 gggcgttacg ccaaccgttt caaagacagc ccaaccgcgc ccgaagccat gttcaaaatc
     6241 ggcgaatgcc aatacaggtt gcagcagaaa gacattgcaa gggcaacttg gcgcagcctg
     6301 atacaggctt acccgagcag cccggcggca aaacgcgccg ccgcagccgt acgcaaacga
     6361 tagtttttcc atttttccgc tttttacccc atccgcacca aggagagatt tatgacacaa
     6421 atcggcatca tcatgggcag caacagcgat tggcccgtta tgcggcaggc agcgcagttt
     6481 cttgaagagt tcggcgtaga atatgaggcg cgcgtcgttt ccgcacaccg cactccggat
     6541 ttaatgttcc aatacgccga aaccgcacgg gcgcgcggca tcaaagccat catcgcgggt
     6601 gcgggcggcg cggcgcattt acccggcatg gttgccgcca agaccaccgt ccccgttttg
     6661 ggcgtacccg tccccagcaa atacctgcgc ggcgaagatt cgcttttatc gattgtacaa
     6721 atgcccaaag gcgtacccgt cgccacattc gccatcggcg aggcaggcgc ggcaaatgcc
     6781 gcattgttcg ccgtttccat gctggccaac gaaaaccccg aactggcgca aaaactggca
     6841 gacttccgag ccaaacagga acaggctgtt ttgagtatgg aattggaaca gatttaaaac
     6901 ccgccgtccg cgaatatata gtggcttaaa tttaaaccag tacggcgtta cctcgccttg
     6961 ccgtactatt tgtactgtct gcggcttcgt cgccttgtcc tgatttttgt taatccacta
     7021 tacaaatgcc gtctgaagcc ctgtttcggg tttcagacgg catttttgca aacaactgtt
     7081 tatgcctgtt ctttttggcg cattttttct gccattagtt cgtgcagggt tttcttcgcc
     7141 ggtttcatcg gcacgcggtt ttgcgtccaa cccaactgtt tgcgcggggt caggttgcgg
     7201 aacttggtgg ctgcccaacc gaaggcgcgg taggttttgc tgccgctgaa aataccgttg
     7261 aatgtgcgcc acgccatttg ttcgccgaag gtatgcgatg cgccttgccc taggatgggg
     7321 tgtggcacgg tttcggtcgg cgaacgttgc gcttcaacgc gcaaacgctg catttgttcg
     7381 gtaatcggga tgcgtaccgg acagacttcc acacacgcgc cgcacatggt acaggcggtt
     7441 ggcaagtcgc gggtggcatc cagacccaac aggtgagggg aaataatctc gccaatcggg
     7501 ccgggatagg ttgtgccgta tgccgcgccg ccgatacggg tataaaccgg gcaatggttc
     7561 atacacgcgc cgcaacggat acattgcaag gtgcggcgca tttggtcttc ggcataggct
     7621 tggctgcgac cgttgtcaag caggaccaag tgcatttctt gaggaccgtc cagctcttcg
     7681 ctacggcgcg ggccggtaat catattgaaa taagtggtaa tgttctgacc aatggcagaa
     7741 cgcggcagca ggctgtacaa gggtgggatg tcggacaatt tcgccaccac tttttcaatg
     7801 ccggtaatag cgatatgcac gggcggtacg gtggtactca agcgaccgtt gccttcgttt
     7861 tccaccagac acagcgtacc cgtttcggca acagcaaagt ttacgccact caaaccgaca
     7921 tcggcagtgc tgtaaatatc gcgcagggct ttgcgggcga agccggtcag ttggtccacg
     7981 tcgtccgtaa gcggagttcc aaggttttgg tggaacagtt cactcacctg ttctttggtt
     8041 ttgtgaatgg cgggcatcac gatatgggtc ggtttttcgc ctgccatttg gacgatgaac
     8101 tcgcccaagt cgctttctac cgctttaatg ccttttgctt caagataatg gttcagctcg
     8161 atttcctcgc tgaccatcga tttgcctttg accatcagct tgccgttttt ggctgtgatg
     8221 atgtcgtgga taatttggca ggcttcggtc ggggtttctg cccagtgcac tttcacgccc
     8281 aacttagtca ggttttcttc cagctgctcc agcagggctg gcaatttaga caatgagcgc
     8341 tgacggacgt gttcgcacaa atcgcgcagg ctttgcagct cttcttcgtc ggtcaaaacg
     8401 gctttgcgtt tggtcatcag catatccatc gcggtacgca ggcttttgcg caaaggcttg
     8461 tcttgaaggg aaattgcggc gttttgcttg aaagtttccg gcttcatgtg aaatttgatg
     8521 gtttgcgtag tcatgcgttt tcctccaaat cggcagggga aatgtggtcg ggcaggatgg
     8581 cgaggatgac caaatcgcgc gggccgtgcg cgccgtaagc aagcgtcagt tggatgtctg
     8641 cggttttgga cgggccggaa atcaggaata cattggtcgg cataccgttt tccaccagtt
     8701 cttcgccttc gacggcatta tgaaactcgt tgtacatctt ggacgtatcg aacaggcaga
     8761 aatgcacggg cggaacgaga ctcaaagtac gcggttcttc ggggctggaa aacagcatca
     8821 gcgtgccggt gcgggcgatg ccgcattgcg cgccgctgaa gcccgcatcg atgttcgtga
     8881 aaaactcggt tttccaagta tcgatttcgc gctcgaaggc aatcggttcg atattgctgt
     8941 ccgccaatgc ggcacgggca atttgtccgt gttcggtcgc caagggcagc aggatgtttt
     9001 tcaaaccctt gccttctgcc gcttcgcgga aaacctgcat ccaattgctt ttcgtcaccc
     9061 aataaatttc ggttttgacc gcacgcatag cggcagccca atgtttcaga cgctcaactt
     9121 cgctgcccca agaaacaccc atttcacggt aataatcaaa aaccgcaggt tcttccatcg
     9181 gcaatgcgtc ggcttttttc agttttgcca aaatattttc gcgcgcgctc atgctttgcc
     9241 tccggtacgt tccaacaaga aggatgcgat atgtttcgga cgcggcatat tcggttcgtc
     9301 cttagcaatt ttgccgccga tgttcatcat acagccgcag tccgcgctga tgatttcggt
     9361 tgcgccggtt tctttcagcg cggcgacttt gtcggttacc atcgcgccgg aaatatcggc
     9421 ttgtttgacg gagaatgtgc cgccgaagcc gcaacattcg ctttcgtggt cgtggacgat
     9481 gcgttcgacg ttttccatac cgtcaatcag ttgccagccc gagagatgga cattcatttc
     9541 gcggcgggcg gcgcaggaag tgtgaacggc gactttgagc ggttcgccct tgtcttcggg
     9601 tttgaaaccg atggcaagca ggaaatgggt aaactcgatg atgcggccgg cgcaatccac
     9661 agccctttcc tcgtactcgc tgcctttaaa cagcgtcggc caatggtgct tcatcatacc
     9721 gccgcacgaa ccggacggta cgacaatcgg ccactcctcg gggaaaaggt cgagttgcgc
     9781 tctggcgaca tcaaaggctt cggtcggatg gccggatgaa taggcgggct gaccgcagca
     9841 gctttgcgcc atcgggaaat ggacgcgtat gccctgttgc tcgattaggg taatggcatc
     9901 catgcctgct tcgggcataa aaagatcaag gacgcaagtg ccgaaaaaat agacatcggt
     9961 cggattgctg tcgtatcgga tgatttttgg gggaatggtt gcgctcatgt tttttgataa
    10021 cgggaaaccc gtttttttct gtagaaaggt aagcgtttac tttaagtaat tgactgttgc
    10081 gggtcaagtc taattttaaa aaataatccg gtttttctta caaactaccc cataacgctt
    10141 actgtacctt aatctgatag ttttcgataa taattatcat tacaatgcaa tgccggttcg
    10201 tttgcttgtg aacattcaag atgccgactc tgacggcatt cagacagcat ctgaaaacaa
    10261 taacggcaca aggatggggt acaatcgctc tatggaaaaa aacaccctat ccgcccgcgc
    10321 accatcccct tggctgccgc ttctgctggc aattgccatt tttatgcaga tgttggatgc
    10381 gaccatttta aataccgcac tgcctgaaat tgccgccgac ctgaatgagt cgccattgaa
    10441 catgcagctg gcggttattt cctacacgct gacggttgcc ctgctgattc ctttgagcgg
    10501 ttatttggcg gacaggttcg gaacgaaaaa agtctttttc ggttcgattg ccgtttttat
    10561 gctcggatcg gcattgtgcg ccgcatcggg ttcgctgttt gaattgacgc tttcccgtgt
    10621 cgttcagggc atcggcggtt cgatgctggt tccgataccg cgtctgacca tcttgcgtgt
    10681 gtacgacaag tccaagctgc tcaacgccat caattatgcg gttatgcccg cattaatcgg
    10741 accggtttta gggcctttgg cgggcggtta tctggtcgaa tacgcttcgt ggcactggat
    10801 tttcctgctc aacctgccca tcggtcttct gggtttcata ttgggacgca acatcatgcc
    10861 cgatattaaa ggcagcaata tctctttaga cttcaaaggc tatctgattt tttctgccgc
    10921 cgcgtgcctc ttgttacttt cggcagaaag cctgtcgcac gcgctgcctc cgtattttgc
    10981 actgttgccg ctgtgcggcg gactgctgtt tgcacgccgt tatttccgac atatgaaaac
    11041 cgcgtccaaa ccgatttatt ccgccgacct gtttctgata cgcactttcc gtctaggact
    11101 ggcgggcaat ctgttcagcc gtctcggcat cagctcgatt ccttttctga tgcccctgat
    11161 gtttcaagtc gctttcggct tcggcgcaag cctgtcgggt tggctggtcg cccccgtcgc
    11221 cctgtcttcg ctgctggtca aaccgctgat tgcaccgctc atgaaacgtt tcggctaccg
    11281 cacggtactg ctttggaaca ccaagctgct tgccgccttc atcatgctgc tcgccctacc
    11341 tgatggaaac tcgccgctgt ggatttggat tttcctctcg ctggcgatcg gcgcgtgcaa
    11401 ctccctacag ttttctgcca tgaacacact gaccctcgcc gatttgcgcc cgcaacagac
    11461 cggcagcggc aacagcctga tggcggtcaa ccaacagctt gccatcagca tgggcattgt
    11521 tgtcggcgca ttaatcctta aaaactggac atttctgata ccggcttctt caggtctgca
    11581 ttccgccttc cgtatgaccc tgctcagtat cggcggcatt acccttgcct cgtcgttggt
    11641 tttcaagcgt ctgcacgttt cagacggtgc aaacctgaca cggaacacac cgtcctaaag
    11701 cggtccgcac gcaaaacttt tacccgtttc aacgtttgga ttatgattcc gcacttccat
    11761 gcgcaccaac cccaaaacac aggcaatgcc gtctgaaacc atatccctga tgaaaacacg
    11821 cagcctaatt tcccttttat gcctccttct ctgttcatgt tcttcatggt tgcccccact
    11881 ggaagaacgg acggaaagcc gtcatttcaa tacttccaaa cccgtccgcc tggacaacat
    11941 cctgcaaatc cggcacaccc ctcataccaa cgggctatcc gatatctatc tgttgaacga
    12001 cccccacgaa gcctttgccg cccgcgccgc ccttatcgaa tctgccgaac acagcctcga
    12061 tttgcaatac tacatctggc gcaacgacat ttccggccga ctgctgttca acctcgtgta
    12121 ccttgccgca gaacgcggtg tgcgcgtacg cctgctgttg gacgacaaca acacgcgcgg
    12181 attggacgac ctcctgctcg ccctcgacag ccatcccaat atcgaagtgc gcctgttcaa
    12241 ccccttcgtc ttacgaaaat ggcgcgcact cggctacctg accgacttcc cccgcctcaa
    12301 ccgccgcatg cacaacaaat cctttaccgc cgacaaccgc gccaccatac tcggcggacg
    12361 caatatcggc gacgaatact tcaaagtcgg tgaggacacc gttttcgccg acctggacat
    12421 cctcgccacc ggcagcgtcg tcggcgaagt atcgcacgac ttcgaccgct actgggcaag
    12481 ccattccgcc cacaacgcca cgcgcatcat ccgcagcggc aacatcggca agggtcttca
    12541 agcactcgga tacaacgacg aaacgtccag acacgcgctc ctgcgctacc gcgaaaccgt
    12601 cgaacagtcg cccctctacc aaaaaataca gacaggacgc atcgactggc agagcgtcca
    12661 aacccgcctc atcagcgacg accctgcaaa aggactcgac cgcgaccgcc gcaaaccgcc
    12721 gattgccggg cggctgcaag acgcgctcaa acagcccgaa aaaagcgtct atctggtttc
    12781 accctatttc gtccccacaa aatccggcac agacgcactg gcaaaactgg tgcaggacgg
    12841 catagacgtt accgtcctga ccaactcgct acaggcgacc gacgttgccg ccgtccattc
    12901 cggctatgtc aaataccgaa aaccgctgct caaagccggc atcaaactct acgagctgca
    12961 acccaaccat gccgtccctg ccacaaaaga caaaggcctg accggcagct ccgtaaccag
    13021 cctgcatgcc aaaaccttca ttgtggacgg caaacgcatc ttcatcggct cattcaacct
    13081 cgacccccgt tccgcacggc tcaatactga aatgggcgtt gttatcgaaa gccccaaaat
    13141 cgcagaacag atggagcgca cccttgccga taccacaccc aaatacgcct accgcgttac
    13201 cctcgacagg cacaaccgcc tgcaatggca cgatcccgcc acccgaaaaa cctacccgaa
    13261 cgaacccgaa gccaaacttt ggaaacgcat cgccgcaaaa atcctatccc tgctgcccat
    13321 agaaggttta ttatagaaat gtag
//
LOCUS       DAWGKF010000046        13241 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.046, whole genome shotgun sequence.
ACCESSION   DAWGKF010000046 DAWGKF010000000
VERSION     DAWGKF010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13241)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13241)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13241
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.046"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(44..811)
                     /locus_tag="WHR07_000916"
     CDS             complement(44..811)
                     /locus_tag="WHR07_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEZ2130145.1"
                     /translation="MSSNKASFFTRLRRLCRLTVWLFKTGKNLRGIDGGCPESRNRAV
                     IELGRGALTALDIGLEVGRPAPEHPNGVLVAANHVSWLDIFAMSAVYPSSFIAKQEIK
                     SWPVLGKMGQNAGTVFINRNSRRDIEPINRAVYETLQRGQNVSFFPEARTSSGLGLLP
                     FKAALFQSAIDAGAKVLAVALRYYDETGKRTARPSYADVGLPTCLWRIVSMKKLTIKV
                     DFVCVADAAESEDRYALKDKIEESIRAVVADDADIAV"
     gene            complement(899..1726)
                     /gene="mutM"
                     /locus_tag="WHR07_000917"
     CDS             complement(899..1726)
                     /gene="mutM"
                     /locus_tag="WHR07_000917"
                     /EC_number="3.2.2.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase"
                     /protein_id="HEZ2130146.1"
                     /translation="MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEI
                     LSGRQVLSCGRRAKYLIVRFQTGILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVF
                     SDGTVMRYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCADYLYVRLKAQKRAV
                     KLALMDNAVVVGVGNIYANESLFRAGISPHRPANRLKKKECALLVETVKAVLRRAIET
                     GGSTLRDFVDSDGKSGYFQQEYTVYGRHNQPCPQCGGLVVKETLGQRGTFYCPNCQK"
     gene            complement(1778..2443)
                     /locus_tag="WHR07_000918"
     CDS             complement(1778..2443)
                     /locus_tag="WHR07_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEZ2130147.1"
                     /translation="MDSWFEDTAMGRYVAKLEQDFFGRYLDSYRFSGMCAVQVGGPWL
                     SLSEDVVCVPRDMSMSAENMALADVSADMLLFPHTLEGGVPSQILSEAHRILKPSGRL
                     MLTGFNPYSLWGFSRWFDGERLPEKRFCLPLPELKRQLADVGFDIEFGKFMVYLPPVS
                     SLGQIRFWRFMEKAGDRWWPQCAAVYGLVLVKRAAGVTPLPAWDGYLGGKALAAGAAR
                     IAD"
     gene            2622..4598
                     /locus_tag="WHR07_000919"
     CDS             2622..4598
                     /locus_tag="WHR07_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEZ2130148.1"
                     /translation="MSKLKTIALTASGLSVCPGFLYAQNTSSHQIGLAIMRLNSSILD
                     LPPTKQYFQSGSLWSELRQGFRMGEVNPELVRRHESKFIASHSYFNRVINRSRPYMYH
                     IANEVKKRNMPAEAALLPFIESAFVTKAKSHVGASGLWQFMPATGRHYGLEKTPVYDG
                     RHDVYAATDAALNYLQYLYGLFGDWPLAFAAYNWGEGNVGRAINRARAQGLEPTYENL
                     RMPNETRNYVPKLLAVRNIIATPQSFGMNISDIDNKPYFQAVEPDRPLDNEAIARLAG
                     ITQSELLALNPAFNVPAFIPKSKRKLLLPVASVQTFQSNYLNAAPDSLFSWEVYTPAA
                     KTSLSDISTATGMSIADIKRLNNLNGNLVNAGRSILVAKNGKTLQTASESVVPIDIDN
                     TPDTYRSNMPAGTVNVGIARIRPAAAQTADITVAPLPQKTVRTEPDPLVRIAEPALAT
                     AAAQPQTEKQTAMPSETQTATLAQIIPQNDMQAADELMQLVARNNLRRQAEETISAVI
                     GTPDTVAEHNISSSPQHTVAADGKRRARLETRVAKAADGEAEISPLHASIHRVVEGDT
                     LFNIAKRYNVSVADLIVANNIKGNTIQKGQVLRLAQAAPAQTRIEKVSYTARKGDTFK
                     SIAARFNIHIDDIRRLNPNLNTINPGQRVKLIGS"
     gene            4666..5358
                     /locus_tag="WHR07_000920"
     CDS             4666..5358
                     /locus_tag="WHR07_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HEZ2130149.1"
                     /translation="MKLIKYLQYQGIGSRKQCQWLIAGGYVFINGTCMDDTDADIDSS
                     SVETLDIDGEAVTVVPEPYFYIMLNKPEDYETSHKPKHYRSVFSLFPDNMRNIDMQAV
                     GRLDADTTGVLLITNDGKLNHNLTSPSRKIPKLYEVTLKHPTGETLCETLKNGVLLHD
                     ENETVCAADAVLENPTTLLLTITEGKYHQVKRMIAAVGNRVQHLHRRRFAHLETENLK
                     PGEWKFIDCPKF"
     gene            5903..6346
                     /locus_tag="WHR07_000921"
     CDS             5903..6346
                     /locus_tag="WHR07_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEZ2130150.1"
                     /translation="MTVAGATVGFGATWRFPYLVGENGGGAYVFLFCIAMLVIGIPMI
                     LVENVIGRRKGVNALDAFGGPMNGKPIAKIWKLVGWMGLLGAFGIMAYYMALGGWVIS
                     YIVNIIGGNLNISSPIDGVVTKGFFAEHIETALGKLRFIRCFLSP"
     gene            6406..7215
                     /locus_tag="WHR07_000922"
     CDS             6406..7215
                     /locus_tag="WHR07_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEZ2130151.1"
                     /translation="MPLLFLFLIAMVVRNVTLPGAMEGVAFYLKPDFSKITAELFVFV
                     LGQVFFALSLGFGVMITLSSYLDKNENLVQTAVITAITNTIIAILAGFMIFPSLFSFG
                     VAPDSGPTLVFQSLPIVFSHMWAGSVFAVIFFSLLLIAALTTSLTIYEVLITTIQEKT
                     KIRRTAAITIVLAAIFIFGNIPSILSYGPWKDVSIFGKNIFDAFDYISGNILFMLTAL
                     GSALFVGFVMKDEAKEELLYKGNHTTVNIWFAYVKYLVPLVILLIFISNLF"
     gene            7459..8115
                     /locus_tag="WHR07_000923"
     CDS             7459..8115
                     /locus_tag="WHR07_000923"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HEZ2130152.1"
                     /translation="MNRQKVIAIDGPGASGKGTVAARVAAALGYDYLDTGALYRLTAL
                     YAQKQGVGWHDEENVSELAKKLPAVFSGSRILLGGEDVSDGIRTEAIGMGASAVAQLP
                     KVRAALLQRQRDFLTEKGLVADGRDTGSVVFPQAELKIFLTAESKIRAERRAKQIGIP
                     CEGLAFERILSDIEARDEADRNRKVAPLKQQPDALLLDTSRLTIEETVKKVLDWYREV
                     "
     gene            8271..9956
                     /gene="rpsA"
                     /locus_tag="WHR07_000924"
     CDS             8271..9956
                     /gene="rpsA"
                     /locus_tag="WHR07_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HEZ2130153.1"
                     /translation="MSMENFAQLLEESFTLQEMNPGEVITAEVVAIDQNFVTVNAGLK
                     SESLIDVAEFKNAQGEIEVKVGDFVTVTIESVENGFGETKLSREKAKRAADWIALEEA
                     MENGDILSGIINGKVKGGLTVMISSIRAFLPGSLVDVRPVKDTSHFEGKEIEFKVIKL
                     DKKRNNVVVSRRAVLEATLGEERKALLENLQEGSVIKGIVKNITDYGAFVDLGGIDGL
                     LHITDLAWRRVKHPSEVLEVGQEVEAKVLKFDQEKQRVSLGMKQLGEDPWSGLTRRYP
                     QGTRLFGKVSNLTDYGAFVEIEQGIEGLVHVSEMDWTNKNVHPSKVVQLGDEVEVMIL
                     EIDEGRRRISLGMKQCQANPWEEFAANHNKGDKISGAVKSITDFGVFVGLPGGIDGLV
                     HLSDLSWTESGEEAVRKYKKGEEVEAVVLAIDVEKERISLGIKQLEGDPFGNFISVND
                     KGSLVKGSVKSVDAKGAVIALSDEVEGYLPASEFAADRVEDLTTKLKEGDEVEAVIVT
                     VDRKNRSIKLSVKAKDAKESREALNSVNAAANANAGTTSLGDLLKAKLSGEQE"
     gene            9967..10281
                     /locus_tag="WHR07_000925"
     CDS             9967..10281
                     /locus_tag="WHR07_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HEZ2130154.1"
                     /translation="MTKSELMVRLAEVFAAKNGTHLLAKDVEYSVKVLVDTMTRSLAR
                     GQRIEIRGFGSFDLNHRPARIGRNPKTGERVEVPEKHVPHFKPGKELRERVDLALKEN
                     AN"
     gene            complement(10631..11038)
                     /locus_tag="WHR07_000926"
     CDS             complement(10631..11038)
                     /locus_tag="WHR07_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEZ2130155.1"
                     /translation="MTYTTAKAAEKIGISAHTLRFYDKEGLLPNIGRDEYGNRCFTDN
                     DLQWLGLLQCLKNTGMSLKDIKRFAECTVIGDDTIEERLSLFENQIENVKCQIAELKR
                     YLDLLEYKLAFYQKAKALGSVKAVNLPQIPETA"
     gene            11186..12295
                     /locus_tag="WHR07_000927"
     CDS             11186..12295
                     /locus_tag="WHR07_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000842106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase/class
                     III alcohol dehydrogenase"
                     /protein_id="HEZ2130156.1"
                     /translation="MKSRAAVAFAPNQPLQIVEIDVEMPRKGEVLIRNTHTGVCHTDA
                     FTLSGSDPEGVFPVVLGHEGAGVVVAVGEGVSSVKPGDHVIPLYTAECGECEFCCSGK
                     TNLCVSVRDTQGKGLMPDGTTRFSYQGQPIYHYMGCSTFSEYSVVAEVSLAKINPEAN
                     HEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID
                     TNPSKFELAKQFGATDCLNPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRQALES
                     AHRGWGQSIIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGVKGRSELPKMVEDSMKGD
                     IELEPFVTHTMTLDQINKAFDLMHEGKSIRAVIHY"
     gene            12304..13131
                     /gene="fghA"
                     /locus_tag="WHR07_000928"
     CDS             12304..13131
                     /gene="fghA"
                     /locus_tag="WHR07_000928"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011961786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HEZ2130157.1"
                     /translation="MKLIEQHQIFGGSQQVWAHHAQTLQCEMKFAVYLPNNPENRPLG
                     VIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVASDTSPRGEQVPNDDAYDLGQGAGF
                     YLNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQE
                     RYQSVSAFSPILSPSLVPWGEKAFTAYLGKDREKWQQYDANSLIQQGYKVQGMRIDQG
                     LEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHSYYFIASFIGEHIAYHAAFLK"
BASE COUNT         3511 a         3636 c         3046 g         3048 t
ORIGIN      
        1 atccgcaaaa gcgaatcata ctgccacatt ccggcaaccg gtttcagaca gcgatatccg
       61 catcgtcggc gacaacggca cggatgcttt cttcgatttt atcttttaaa gcataacggt
      121 cttcgctttc cgccgcatcc gccacgcaaa cgaaatcgac ttttatcgtt aattttttca
      181 tagacacaat gcgccacagg caggtcggca aaccgacatc ggcatatgag ggacgagccg
      241 tcctttttcc cgtttcgtca taataacgca gcgcgaccgc caaaaccttt gcccccgcat
      301 caatggcgga ttggaacagc gcggctttga acggcaggag ccccagtccg gaggaagtcc
      361 gcgcttcggg gaaaaaactg acgttttgac cgcgttgcaa ggtttcgtag acggcgcggt
      421 taatcggttc gatgtcgcgc cgcgaattgc ggttgatgaa caccgttccc gcgttctgcc
      481 ccatcttgcc caataccggc cagcttttga tttcctgctt ggcgataaag ctgctcggat
      541 aaaccgcgct catcgcgaaa atatccagcc aggacacgtg gttggcggca accaagacac
      601 cgttcggatg ttcgggtgcg ggcctgccca cctccaatcc gatatccaaa gccgtcagag
      661 cccccctgcc caactcgatt accgcccgat tgcgcgactc ggggcagccg ccgtcaatac
      721 cgcgcaggtt tttgccggtt ttgaatagcc agaccgtcaa gcggcacaag cggcgcagac
      781 gtgtaaaaaa tgaagcttta tttgaagaca tgaacaattc tttcccgata atcggtgttt
      841 gttgttgaaa cgttcggacg gcataccgat aaaatgccgt ctgaaaccgt tttccgccct
      901 atttctgaca attcgggcag taaaacgtgc cgcgctgccc caaagtttct ttcacaacca
      961 aaccgccgca ctgggggcac ggctgattgt gccgcccgta caccgtatat tcctgttgga
     1021 agtagccact tttgccgtcg ctgtccacaa aatccctcaa ggtactgccg cccgtttcaa
     1081 tggcgcgccg caacaccgct ttgacggttt caaccaaaag cgcacactct ttctttttca
     1141 gacggttggc aggacggtgg ggcgaaatgc ccgctctgaa caggctctcg ttggcataaa
     1201 tgttgcccac accgaccacg accgcattgt ccatcagggc aagtttgacc gcgcgtttct
     1261 gcgccttcag cctcacatac agataatccg cacaaaatgc ctccgacaaa ggctccggcc
     1321 ccagtttttc caacagcgga tgatgttctt cgattccctc ataccaaagt atcgcgccga
     1381 actttctcgg atcgcggtaa cgcatgaccg tgccgtctga aaacacaata tcgacgtgat
     1441 cgtgtctgtc cggcctgccg atacgtccgt ccgacggcgt aaaaatccgc aagctgcccg
     1501 acatccccaa gtgaatcagc aaaatccccg tttggaaacg gacaatcaga tatttggcac
     1561 gcctgccgca ggacaaaacc tgccgaccgg acaaaatctc ccccaaatcg ggattgatct
     1621 gccagcgcag cttcaattgg cgcaatacca cggcttccac cgttttccct tcaatatgcg
     1681 gcgcgatgcc gcgcaacgtc gtttccactt ccggcaattc cggcataacc cctcccgaca
     1741 tttcttctga cagatgccgt ctgaaagacg gctgtcccta atccgcaatc cttgccgcac
     1801 ccgccgcaag ggctttgccg cccaaatacc cgtcccacgc gggcaggggc gttacgcccg
     1861 ccgccctttt gaccaaaacc aaaccgtaca ctgcggcaca ctgcggccac caacggtcgc
     1921 ccgccttttc cataaaccgc caaaagcgta tttgcccgag cgacgaaacg ggcggcagat
     1981 acaccataaa tttcccaaat tcaatatcga aaccgacatc cgcaagctgc cttttcaact
     2041 cgggcagcgg cagacagaag cgtttttccg gcaggcgttc gccgtcaaac caacggctga
     2101 atccccagag cgaatacgga ttgaaacccg tcagcatcaa acgtccggac ggtttcaata
     2161 tccggtgcgc ctcggacagg atttgcgaag gaacaccgcc ttcaagcgta tgcggaaaaa
     2221 gcagcatatc cgcagaaaca tccgccaaag ccatattttc cgccgacatc gacatatctc
     2281 gcggcacaca gacaacatct tcagacaggc tcagccacgg accgcccacc tgaaccgcac
     2341 acattcccga aaaacggtat gaatctagat accgcccgaa gaaatcctgt tccaattttg
     2401 caacataccg ccccatcgcc gtatcttcaa accatgaatc catattgcgt ccgtttcaaa
     2461 cagattgcct gccgatattc tattccaaac aggatttctg tcaaaaaaca catcggccgc
     2521 ccatttccga atccgcataa agttcctgta aaacttgacg ctttttcagt caaacagtac
     2581 catcggacga taaaatatgt ttattccgcc gaatataaat catgtccaaa ctcaaaacca
     2641 tcgctctgac cgcatcaggt ctgtccgttt gtccgggttt cctatacgcc caaaacacct
     2701 catcacacca aatcggtttg gcgattatgc gcttaaactc ttcaatactc gacctgcccc
     2761 cgacaaaaca atatttccaa tccggcagcc tgtggagcga gctgcgccaa ggcttccgga
     2821 tgggcgaagt caatcccgaa ctggtacgcc gccacgaaag caaattcatc gcaagccaca
     2881 gctatttcaa cagggtcatc aaccggagta gaccctatat gtaccatatc gccaacgaag
     2941 tcaaaaaacg caatatgccc gccgaagccg ccctgcttcc cttcatcgaa agcgcgttcg
     3001 tcaccaaagc caaatcacac gtcggcgcat caggattatg gcagtttatg cccgctaccg
     3061 gcaggcatta cggcctggaa aaaacaccgg tttacgacgg caggcacgac gtttacgccg
     3121 ccaccgatgc cgcactcaac tatctgcaat acctctatgg actgttcggc gactggccgc
     3181 ttgcctttgc cgcctacaac tggggtgaag gcaacgtcgg acgcgccatc aaccgcgccc
     3241 gcgcccaagg gctcgaaccg acctacgaaa acctgcgtat gcccaacgaa acgcgcaact
     3301 atgtccccaa gctgctcgcc gtgcgcaaca ttattgccac tccccaatct ttcggcatga
     3361 atatcagcga catagacaac aaaccgtatt ttcaggcagt cgaaccggat cgtccgctcg
     3421 acaacgaagc catcgcccgg cttgccggca tcacgcaaag cgagctgctc gccctaaacc
     3481 ccgcattcaa cgtccccgcg tttatcccca aaagcaaacg caaactgctg cttcctgtcg
     3541 cgtccgtaca aaccttccaa agcaactacc tcaacgccgc acccgacagc ctgttttcat
     3601 gggaagtcta tacgcctgcc gccaaaacca gcctgtccga catctcgacg gcaaccggca
     3661 tgagcattgc cgacatcaaa cgcctcaaca acctgaacgg caaccttgtc aacgcaggac
     3721 gcagcatcct tgtcgccaag aacggcaaaa cccttcagac ggcatcggaa tccgtcgttc
     3781 ccatcgacat cgacaatacg cccgacacct accgttccaa tatgccggca ggcacggtga
     3841 acgtcggcat tgcccgaatc cgacccgccg ccgcacagac agcggacatt accgtcgcac
     3901 ctttgccgca gaaaaccgtc cgtacggaac ccgatcccct tgtccgtatt gccgaacctg
     3961 cccttgcgac agccgcagcg caacctcaaa ccgaaaaaca gaccgccatg ccgtctgaaa
     4021 cccaaaccgc aacactcgcg cagatcatcc cccaaaacga catgcaggcg gcagacgaac
     4081 tcatgcagct tgttgcccga aacaacctgc gccgacaggc tgaagaaacc atctccgccg
     4141 tcatcggcac gcctgacaca gttgccgaac acaacatttc ctcatctccg caacataccg
     4201 ttgccgccga cggcaaacgc cgggcacgtt tggaaacgcg cgtagccaaa gctgccgacg
     4261 gcgaagccga aatctccccg ctccatgcca gcatccaccg cgttgtagaa ggcgacaccc
     4321 tgttcaacat tgccaaacgc tacaacgtca gcgtagccga cctgattgtc gccaacaaca
     4381 tcaaaggcaa caccatccaa aaaggacagg tactccgcct ggcgcaggca gcccctgccc
     4441 aaacccgtat tgaaaaagta tcctacaccg cgcgcaaagg cgacaccttc aaaagtatcg
     4501 ccgcgcgctt caatatccat atcgacgaca tccgccggct caatcccaac ctgaacacca
     4561 tcaatccggg acagagggtc aaactgattg gaagctgatt cggatacggc acatgacagg
     4621 actttctcag tcctgtcttt ttcatcccac atttcccata ccatcatgaa actcatcaaa
     4681 tacctgcaat atcaaggcat aggaagccgc aagcagtgcc aatggctgat tgccggcggt
     4741 tatgttttca tcaacggaac ctgcatggac gacaccgatg cagacatcga ttcctcatct
     4801 gtcgaaacgt tggatattga cggggaagca gtaaccgtcg ttcccgaacc ctatttctac
     4861 atcatgctca acaagcctga agattacgaa acttcgcaca aacccaagca ctaccgcagc
     4921 gtattcagcc tgttccccga caatatgcgg aacatcgata tgcaggcggt cggcaggctg
     4981 gatgcggata cgaccggcgt attgctgatt accaacgacg gcaaactgaa ccacaacctg
     5041 acttcgccga gcagaaaaat tcccaagcta tacgaagtaa cgctcaaaca ccccacagga
     5101 gaaacgctct gcgaaacctt gaaaaacggc gtgctgctcc acgacgaaaa cgaaaccgtt
     5161 tgtgccgccg atgccgtttt ggaaaacccg accaccctgc tgctgaccat taccgaagga
     5221 aaataccacc aagtcaaacg catgatcgcc gccgtcggca accgcgtgca acaccttcat
     5281 cgtcggcgat tcgcacattt ggaaacagaa aacctgaaac ccggcgaatg gaaatttatc
     5341 gattgtccaa aattctgaaa caaaattcca taatttccct atattcaact atatgcttat
     5401 taaataagta gttttacaaa aattaactca aaaaaaaaac agttagcttg cgatataatt
     5461 cgcttgtctg agtaacgcct gttcaagcag gcttatgagt aagacgtttt ccccgtaatg
     5521 tgttttgcca tctatacttc tcccccttgt atagatggtt tttttatctt cgtttactac
     5581 acatactaca tatgttactg acgcagcatt cccgatcata tgacatatga aattttattt
     5641 caccgtccca gtgtagaaaa ataaacgatt catctatcta taaaatctga ttcaatcctt
     5701 gttgatttat gcaaatcaga aatatccact ataaaatata actctattag tgaaaataac
     5761 tacacactta aaaaacaatc agtcagttcc tgttaaaaaa cgcgtgtaga atttccgctt
     5821 tatctcaatc ggacacggtt tcaatatgtc ttccccttca aataccaatc gtcaaacctg
     5881 atccagccga ttaacctata tcctgaccgt tgccggcgcg actgtcggtt tcggcgcgac
     5941 gtggcgtttc ccgtatttgg tcggtgaaaa cggtggtggc gcgtatgtgt ttttattctg
     6001 tatcgcgatg ctggttatcg gcattccgat gattttggtg gaaaatgtca tcggacggcg
     6061 caaaggcgtg aacgcgctgg atgcgttcgg cggtccgatg aacggcaaac ccattgctaa
     6121 aatttggaaa ctggtcggct ggatggggct gctcggcgcg ttcggcatca tggcttatta
     6181 catggcactc ggcggctggg taatcagcta tatcgttaat attattggag gaaatttgaa
     6241 tatttccagc cccatcgacg gtgtggttac aaaaggcttc tttgccgaac acattgaaac
     6301 agcccttggg aaattgcgtt ttatacgctg ctttttgtcg ccgtgaacca atggattttg
     6361 gtcaaaggcg ttatcggcgg cattgaaaaa gcggcaaaat agctgatgcc gctgctgttt
     6421 ttgttcctaa tcgcgatggt cgtccgcaac gttacccttc cgggcgcaat ggaaggggtt
     6481 gctttctatc tgaaacctga tttcagcaag attaccgccg aactgttcgt cttcgttttg
     6541 gggcaggtat tttttgccct gagcctgggt ttcggcgtga tgattacctt gtccagctat
     6601 ttggataaaa acgaaaatct agttcagacg gcagttatca cggcaattac caataccatc
     6661 atcgccatac ttgcgggctt tatgattttc ccgtcgctct tcagcttcgg cgttgccccc
     6721 gattccggcc cgactttggt gttccaaagc ttgccgattg tgttctcaca tatgtgggcg
     6781 ggatctgtgt tcgccgtgat tttcttctcg ctgctcctga ttgccgcgtt gacaacttcg
     6841 ctgaccattt atgaagtgtt gattacgacc attcaggaaa aaaccaaaat ccgccgtacc
     6901 gccgcgatta cgattgtatt ggctgccatc ttcattttcg gcaacatccc gtccattttg
     6961 agctacggcc cttggaaaga tgtttccata tttggcaaaa atatttttga cgcttttgac
     7021 tacatcagcg gcaacatctt gtttatgctg accgcgctcg gttccgcgct gtttgtcggt
     7081 tttgtgatga aggacgaagc gaaggaagaa ttgctttata aaggcaacca tacgacggtc
     7141 aatatttggt ttgcctatgt gaaatacctc gtgccgttgg tgattctgct gatttttatc
     7201 agcaacctgt tctaatccgc agcaatcaat gccgtctgaa ggtcatacct ctttcagacg
     7261 gcattgcatt gatgcccgcc acaatacccg caacgccgga atccgaaccg gcttgccggc
     7321 ttctgtcgga tgtttccggg caggcggcgt tccgtctgct tagacaatcg tcctttaaaa
     7381 caggtagaat ccgccccaac gggaaacaca tccttcagac ggcaaaaccc ataccccaaa
     7441 ccatcaggaa tcccccttat gaacagacaa aaagtcatcg ccatcgacgg cccgggcgca
     7501 tcgggcaaag gcacggttgc cgcccgcgtt gccgccgcat tgggatacga ttatctcgat
     7561 accggcgcac tctaccgcct gactgcccta tatgcacaaa aacaaggcgt gggatggcac
     7621 gatgaagaaa acgtttccga actggcaaaa aaactgcccg ccgtattttc aggcagccgc
     7681 atcctgctcg gcggcgaaga cgtttcagac ggcatccgga cagaagccat cggcatgggc
     7741 gcatccgcag tcgcacagtt gcctaaagtc cgcgccgccc tgctgcaacg ccaacgcgat
     7801 tttctgaccg aaaaaggact ggttgccgac ggacgggaca ccggatcggt cgtcttcccc
     7861 caagccgaac ttaaaatctt cctgacggca gaatccaaaa tccgtgccga acgccgcgcc
     7921 aaacaaatcg gcatcccctg cgaaggtttg gcattcgagc gcatcctgtc cgacatcgaa
     7981 gccagagacg aggcagaccg aaaccgcaaa gttgcccccc tgaaacaaca gcccgatgcc
     8041 ctgcttttgg acacaagccg cctgactata gaagaaactg taaaaaaagt gcttgattgg
     8101 tatcgtgaag tttaaatttt caggtataat cgcacaaatt acgtttcaga cggcataaaa
     8161 atcccccata tgccgtctga aaccttatgt acccgtctgc cctgccaagg acggcagata
     8221 tccaccaacc caccccgcac cccttggcgg tgtaccgaaa agagttatat atgtctatgg
     8281 aaaattttgc tcagctgttg gaagaaagct ttaccctgca agaaatgaac ccgggtgagg
     8341 tgattaccgc tgaagtagtg gcaatcgacc aaaacttcgt taccgtaaac gcaggtctga
     8401 aatcagaatc cctgattgat gtagctgaat tcaaaaacgc tcaaggcgaa attgaagtta
     8461 aagtcggcga cttcgttacc gttaccatcg aatccgtcga aaacggcttc ggcgaaacca
     8521 aactgtcccg cgaaaaagcc aaacgtgcag ccgattggat tgccctggaa gaagccatgg
     8581 aaaacggcga catcctgtcc ggcatcatca acggaaaagt caaaggcggc ctgaccgtta
     8641 tgattagcag catccgcgca ttcctgccgg gttctttggt cgacgtacgt cctgtaaaag
     8701 acacttctca cttcgaaggc aaagagatcg aattcaaagt gatcaaactg gacaaaaaac
     8761 gcaacaacgt cgttgtttcc cgccgcgccg ttctggaagc cactttgggt gaagaacgca
     8821 aagccctgct ggaaaacctg caagaaggct ccgtcatcaa aggcatcgtt aaaaacatta
     8881 ccgattacgg tgcattcgtt gacttgggcg gcatcgacgg tctgttgcac atcaccgatt
     8941 tggcatggcg gcgcgtgaaa cacccgagtg aagtcttgga agtcggtcag gaagttgaag
     9001 ccaaagtatt gaaattcgac caagaaaaac aacgcgtttc cttgggtatg aaacaactgg
     9061 gcgaagatcc ttggagcggt ctgacccgcc gttatcctca aggcacccgc ctgttcggca
     9121 aagtatccaa cctgaccgac tacggcgcat tcgtcgaaat cgaacaaggc atcgaaggtt
     9181 tggtacacgt ctccgaaatg gactggacca acaaaaacgt acacccgagc aaagtcgtac
     9241 aactgggcga cgaagtcgaa gtcatgattt tggaaatcga cgaaggccgc cgccgtatct
     9301 ctttgggtat gaaacaatgc caagccaatc cttgggaaga atttgccgcc aaccacaaca
     9361 aaggcgacaa aatctccggc gcggttaaat ccattaccga tttcggcgta ttcgtcggcc
     9421 tgcccggcgg catcgacggt ttggttcacc tgtccgacct gtcctggacc gaatccggcg
     9481 aagaagccgt acgcaaatac aaaaaaggcg aagaagtcga agccgtcgta ttggcaatcg
     9541 acgtggaaaa agaacgcatc tccttgggta tcaaacaact ggaaggcgat ccgttcggca
     9601 acttcatcag cgtgaacgac aaaggttctt tggttaaagg ttccgtgaaa tctgttgacg
     9661 ccaaaggtgc tgttatcgcc ctgtctgacg aagtagaagg ctacctgcct gcttccgaat
     9721 ttgcagccga ccgcgttgaa gatttgacca ccaaactgaa agaaggcgac gaagttgaag
     9781 ccgtcatcgt taccgttgac cgcaaaaacc gcagcatcaa actttccgtt aaagccaaag
     9841 atgccaaaga aagccgcgaa gcactgaact ccgtcaatgc cgccgccaat gcgaatgccg
     9901 gcaccaccag cttgggcgac ctgctgaaag ccaaactctc cggcgaacaa gaataaggtt
     9961 gcagacatga caaagtctga gttaatggtt cgtttggcag aagtgtttgc cgccaaaaac
    10021 ggcacgcatc ttctggcaaa agacgtagag tacagcgtaa aagtcttggt tgacaccatg
    10081 actagatcgc ttgcccgagg tcaacgcatc gaaatccgcg gtttcggcag cttcgatttg
    10141 aaccatcgtc ctgcccgcat cggtcgcaat cccaaaaccg gcgagcgtgt ggaagtacct
    10201 gaaaaacatg taccccactt caagcccggt aaagaattgc gcgagcgggt cgacttggct
    10261 ttaaaagaaa atgccaatta aaccttagca tcaaaacgcc gctgttacgc ggcgtttttt
    10321 ctgtggttta acttcatccg ctgcttcaat accttgagcc aagcaagcaa cggattagag
    10381 cgtggatttt ttatagtgga ttaacaaaaa ccagtacggc gttgcctcgc cttagctcaa
    10441 agagaacaat tctctaaggt gctgaagcac caagtgaatc gattccgtac tatttgcact
    10501 gtctgcggct tcgtcgcctt gtcctgattt ttgttaatcc actatatcat tgcttacaat
    10561 ccgcttttta aacaacaaat ttttgatttc tattacgaac aggacaaaaa tcctgcttat
    10621 tgcactaaaa ctaagccgtt tcaggaattt gcggcaaatt tacggctttt accgaaccta
    10681 atgctttcgc tttttggtaa aacgccaatt tgtattcaag caaatctaaa tagcgtttta
    10741 attcggcaat ttgacacttc acattttcta tttgattttc aaacaaggaa aggcgttctt
    10801 caatggtatc gtcgccaatg acggtacatt ccgcaaagcg tttgatgtct tttaagctca
    10861 ttcccgtatt tttcaagcat tgcaataagc ccaaccattg caaatcgtta tcggtaaaac
    10921 agcggttacc gtattcatca cgtccgatat tgggcaacaa accttctttg tcgtaaaaac
    10981 gtagggtgtg ggcggagatg cctatttttt cggcggcttt ggcagtagta taagtcattt
    11041 tccctccttc taaacaaaaa cagtaaaaaa cacttgcttt agagttaact ctaaagtgta
    11101 aactgttgct atgttgctca ggcaaggcaa ctttgtcaat gaattaagag gaaagacaat
    11161 ggaaatgaaa caagccgatt caaccatcaa atctcgtgcg gcggtggcat tcgcccctaa
    11221 ccaaccctta caaattgtgg aaatcgacgt agaaatgccg cgtaaaggcg aggtgttaat
    11281 ccgcaatacc cacactggcg tgtgccatac tgatgcgttt acgttatcag gaagcgatcc
    11341 tgaaggcgta ttccctgtgg tgcttggaca cgaaggtgcg ggtgtggtcg ttgctgtggg
    11401 cgaaggtgtg tcaagcgtaa aaccgggtga tcacgtgatt ccgctttaca ccgccgaatg
    11461 tggcgaatgt gagttttgtt gttcaggtaa aaccaacttg tgcgtctcag tgcgtgatac
    11521 acaaggtaaa ggcttaatgc cggacggcac gacgcgtttt tcttatcaag gtcagccgat
    11581 ttatcactat atgggctgtt cgactttcag tgaatactcc gttgttgccg aagtttcact
    11641 ggcgaaaatc aaccctgaag ccaaccatga acaagtatgt ttgctcggct gcggcgttac
    11701 cacaggtatt ggtgcggtac ataatacggc aaaagtgcaa gaaggcgact ctgttgccgt
    11761 gtttggctta ggcgcgattg gtttggcggt ggtgcaaggt gcgcgtcaag ccaaagccgg
    11821 ccgcattatc gccattgata ccaatccatc aaaatttgag ttggcaaaac agtttggtgc
    11881 aacggattgt ttgaacccga acgattacga taaaccgatc aaagatgtgt tgttagacat
    11941 taataaatgg ggcattgacc atacctttga atgtatcggc aacgtaaacg taatgcgtca
    12001 ggcattagaa agtgcacatc gtggttgggg tcaatccatt atcatcggcg tagcaggtgc
    12061 aggacaagaa atttcaacgc gtccgttcca gttggtaaca ggtcgtgttt ggaaaggttc
    12121 agcatttggc ggtgtgaaag gtcgctctga actgccgaaa atggtggaag attcaatgaa
    12181 aggcgacatt gagttagaac cgtttgtaac ccacacaatg acactcgatc aaatcaataa
    12241 agcctttgac ttaatgcacg aaggtaaatc gatccgcgcc gttattcact actaaggtat
    12301 gcgatgaaac tgattgaaca acatcaaatt tttggcggtt cgcaacaagt ttgggcgcat
    12361 catgcccaaa cgctgcaatg cgaaatgaaa tttgccgtct atttgccaaa taatccagaa
    12421 aatcgaccgc ttggtgtgat ttattggctt tccggcttga cgtgtacgga acaaaatttc
    12481 attaccaaat caggctttca gcgttatgcg gcagaacatc aagtaattgt ggtggcctcc
    12541 gataccagcc ctcgcggaga gcaagtgccg aacgatgatg cttacgattt aggacagggt
    12601 gcaggctttt atttgaatgc gaccgaacag ccttgggcgg cgaattatca aatgtatgat
    12661 tacattttga acgagctgcc ccgtctgatt gagaaacact ttcctaccaa cggcaaacgt
    12721 tccattatgg ggcattcaat gggcggacac ggcgcattgg tattggcgct gcggaatcag
    12781 gaacgttatc aaagtgtttc tgccttttcg cctattttat cgccaagcct cgtgccgtgg
    12841 ggagaaaaag cctttactgc ttatttaggg aaagaccgtg aaaaatggca gcaatatgat
    12901 gcgaactcac tcattcaaca aggctataaa gtgcaaggta tgcgcatcga tcaaggcttg
    12961 gaagatgagt ttttgccgac acaattgcgt accgaagatt ttatcgaaac ctgccgtgcg
    13021 gcaaaccagc cggtcgatgt gcgtttccat aaaggctacg atcacagcta ttacttcatc
    13081 gccagtttta ttggcgagca tattgcttat cacgccgcgt ttttgaagta aaccaaagag
    13141 cgttcagtgt tcaaagcagt tttgggatag ccggcacgag ggcggtaaga agtgccggca
    13201 taaacgtatg ccgtctgagc cggaaggagc cgactctacg g
//
LOCUS       DAWGKF010000047        13216 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.047, whole genome shotgun sequence.
ACCESSION   DAWGKF010000047 DAWGKF010000000
VERSION     DAWGKF010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13216)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13216)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13216
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.047"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(58..1368)
                     /locus_tag="WHR07_000929"
     CDS             complement(58..1368)
                     /locus_tag="WHR07_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEZ2130158.1"
                     /translation="MDTSKQTLLDGIFKLKANGTTVRTELMAGLTTFLTMCYIVIVNP
                     LILGETGMDMGAVFVATCIASAIGCFVMGFVGNYPIALAPGMGLNAYFTFAVVKGMGV
                     PWQVALGAVFISGLIFILFSFFKVREMLVNALPMGLKMSIAAGIGLFLALISLKGAGI
                     IVANPATLVGLGDIHQPSALLALFGFAMVVVLGHFRVQGAIIITILTITVIASLMGLN
                     EFHGIIGEVPSIAPTFMQMDFEGLFTVSMVSVIFVFFLVDLFDSTGTLVGISHRAGLL
                     VDGKLPRLKRALLADSTAIVAGAALGTSSTTPYVESAAGVSAGGRTGLTAVTVGVLML
                     ACLMFSPLAKSVPAFATAPALLYVGTQMLRSARDIDWDDMTEAAPAFLTIVFMPFTYS
                     IADGIAFGFISYAVVKLLCRRTKDVPPMVWIVAVLWALKFWYLG"
     gene            complement(1507..2685)
                     /gene="ftsZ"
                     /locus_tag="WHR07_000930"
     CDS             complement(1507..2685)
                     /gene="ftsZ"
                     /locus_tag="WHR07_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEZ2130159.1"
                     /translation="MEFVYDVAESAVSPAVIKVIGLGGGGCNAINNMVANNVRGVEFI
                     SANTDAQSLAKNHAAKRIQLGTNLTRGLGAGANPDIGRAAAQEDREAIEEAIRGANML
                     FITTGMGGGTGTGSAPVVAEIAKSLGILTVAVVTRPFAYEGKRVHVAQAGLEQLKEHV
                     DSLIIIPNDKLMTALGEDVTMREAFRAADNVLRDAVAGISEVVTCPSEIINLDFADVK
                     TVMSNRGIAMMGSGYAQGIDRARMATDQAISSPLLDDVTLDGARGVLVNITTAPGCLK
                     MSELSEVMKIVNQSAHPDLECKFGAAEDETMSEDAIRITIIATGLKEKGAVDFVPARE
                     VEAVAPSKQEQSHNVEGMIRTNRGIRTMNLTAADFDNQSVLDDFEIPAILRRQHNSDK
                     "
     gene            complement(2804..4048)
                     /gene="ftsA"
                     /locus_tag="WHR07_000931"
     CDS             complement(2804..4048)
                     /gene="ftsA"
                     /locus_tag="WHR07_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEZ2130160.1"
                     /translation="MEQQQRYISVLDIGTSKVLALIGEVQDDDKINIVGLGQAPSRGL
                     RAGMVTNIDATVQAIRQAVNDAELMADTKITHVTTGIAGNHIRSLNSQGVVKIKDGEV
                     TQADIDRAIETAKAINIPPDQKILDAVVQDYIIDTQLGVREPIGMSGVRLDTRVHIIT
                     GASTAVQNVQKCIERCGLKSDQIMLQPLASGQAVLTEDEKDLGVCVIDIGGGTTDIAV
                     YMNGAIRHTSVIPAGGNLITKDLSKSLRTPLDAAEYIKIHYGVTSCDTEGLGEMIEVP
                     GVGDRTSRQVSSKVLAAIISARIQEIFGVVLGELQKSGFPKEVLNAGIVLTGGVSMMT
                     GIVEFAEKIFDLPVRTGAPQEMGGLSDRVRTPRFSTAIGLLHAACKLEGNLPQPENGA
                     VQEREGGGGLLARLKRWIENSF"
     gene            complement(4134..4862)
                     /locus_tag="WHR07_000932"
     CDS             complement(4134..4862)
                     /locus_tag="WHR07_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HEZ2130161.1"
                     /translation="MWDNAEAMERLTRWLLVMMAMLLAASGLVWFYNSNHLPVKQVSL
                     KGNLVYSDKKALGSLAKEYIHGNILRTDINGAQEAYRRYPWIASVMVRRRFPDTVEVV
                     LTERKPVARWGDHALVDGEGNVFEARLDRPGMPVFRGAEGTSAEMLRRYDEFSTVLAK
                     QGLGIKEMTYTARSAWIVVLDNGITVRLGRENEMKRLRLFTEAWQHLLRKNKNRLSYV
                     DMRYKDGFSVRYASDGLPEKESEE"
     gene            complement(4852..5766)
                     /locus_tag="WHR07_000933"
     CDS             complement(4852..5766)
                     /locus_tag="WHR07_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEZ2130162.1"
                     /translation="MQNFGKVAVLMGGFSSEREISLDSGTAILNALKSKGIDAYAFDP
                     KETPLSELKAQGFQTAFNILHGTYGEDGAVQGALELLGIPYTGSGVAASAIGMDKYRC
                     KLIWQALGLPVPEFAVLHDDTDFDAVEEKLGLPMFVKPAAEGSSVGVVKVKGKGRLKS
                     VYEELKHLQGEIIAERFIGGGEYSCPVLNGKGLPGIHIIPATEFYDYEAKYNRNDTIY
                     QCPSEDLTEAEESLMRELAVRGAQAIGAESCVRVDFLKDTDGKLYLLEINTLPGMTSH
                     SLVPKSAAVTGVGFADLCIEILKTAHVG"
     gene            complement(5879..7288)
                     /locus_tag="WHR07_000934"
     CDS             complement(5879..7288)
                     /locus_tag="WHR07_000934"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEZ2130163.1"
                     /translation="MMKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAAT
                     EHLGSLGIQVYPGHTAEHVNGADVVVTSTAVKKENPEVVAALEQQIPVIPRALMLAEL
                     MRFRDGIAIAGTHGKTTTTSLTASILGAAGLDPTFVIGGKLNAAGTNARLGKGEYIVA
                     EADESDASFLHLTPIMSVVTNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCI
                     DSEHVRAILPKVSKPYATYGLDDTADIYATDIENVGAQMKFTVHVQMKGHEQGSFEVV
                     LNMPGRHNVLNALAAIGVALEVGASVEAIQKGLLGFEGVGRRFQKYGDIKLPNGGTAL
                     LVDDYGHHPVEMAATLAAARGAYPEKRLVLAFQPHRYTRTRDLFEDFTKVLNTVDALV
                     LTEVYAAGEEPIAAADSRALARAIRVLGKLEPIYCENVADLPEMLLNVLQDGDIVLNM
                     GAGSINRVPAALLELSKQI"
     gene            complement(7443..8510)
                     /gene="murG"
                     /locus_tag="WHR07_000935"
     CDS             complement(7443..8510)
                     /gene="murG"
                     /locus_tag="WHR07_000935"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HEZ2130164.1"
                     /translation="MGGKTFMLMAGGTGGHIFPALAVADSLRARGHHVIWLGSKDSME
                     ERIVPQYGIRLETLAIKGVRGNGIKRKLMLPFTLYQTVREAQRIIRKHRVECVIGFGG
                     FVTFPGGLAAKLLGVPIVIHEQNAVAGLSNRHLSRWAKRVLYAFPKAFSHEGGLVGNP
                     VRADISNLPVPAERFQGREGRLKILVVGGSLGADVLNKTVPQALALLPDNARPQMYHQ
                     SGRGKLGSLQADYDALGVQAECVEFITDMVSAYRDADLVICRAGALTIAELTAAGLGA
                     LLVPYPHAVDDHQTANARFMVQAEAGLLLPQTQLTAEKLAEILGSLNREKCLKWAENA
                     RTLALPHSADDVAEAAIACAA"
     gene            complement(8514..9839)
                     /locus_tag="WHR07_000936"
     CDS             complement(8514..9839)
                     /locus_tag="WHR07_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsW"
                     /protein_id="HEZ2130165.1"
                     /translation="MQTDWQVVFLKISEVLVKVGDGVHTLLLDRPIVRDGRKFDAPLL
                     WMVVLMTAFSLLMIYSASVYLASKEGGDQFFYLTRQAGFVVAGLIASGFLWFLCRMRT
                     WRRLVPWIFALSGLLLVVVLIAGREINGATRWIPLGPLNFQPTELFKLAVILYLASLF
                     TRREEVLRSMESLGWQSIWRGTANLIMSATNPQARRETLEMYGRFRAIILPIMLVAFG
                     LVLIMVQPDFGSFVVITVIAVGMLFLAGLPWKYFFVLVGSVLGGMVLMITAAPYRVQR
                     VVAFLDPWKDPQGAGYQLTHSLMAIGRGEWFGMGLGASLSKRGFLPEAHTDFIFAIIA
                     EEFGFFGMCVLIFCYGWLVVRAFSIGKQSRDLGLTFNAYIASGIGIWIGIQSFFNIGV
                     NIGALPTKGLTLPLMSYGGSSVFFMLISMMLLLRIDYENRRKMRGYRVE"
     gene            complement(9965..11302)
                     /locus_tag="WHR07_000937"
     CDS             complement(9965..11302)
                     /locus_tag="WHR07_000937"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HEZ2130166.1"
                     /translation="MTFQNQKILVAGLGGTGISMIAYLRKNGAEVAAYDAELKPERVS
                     QIGKMFDGLVFYTGRLKDALDNGFDILALSPGISERQPDIEAFKQNGGRVLGDIELLA
                     DIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTPVLEAEWQREGKK
                     ADVWVLELSSFQLENTESLRPTAATVLNISEDHLDRYDDLLDYAHTKAKIFRGDGVQV
                     LNADDVFCRAMKRAGREVKWFSLEHEADFWLERETGRLKQGNEDLIATQDIPLQGLHN
                     ATNVMAAVALCEAVGLPREALLEHVKTFQGLPHRVEKIGEKNGVVFIDDSKGTNVGAT
                     AAAIAGLQNPLFVILGGMGKGQDFTPLRDALVGKAKGVFLIGVDAPQIRRDLDGCDLN
                     MTDCATLEEAVQTAYAQAEAGDIVLLSPACASFDMFKGYAHRSEVFIGAFKAL"
     gene            complement(11389..11985)
                     /locus_tag="WHR07_000938"
     CDS             complement(11389..11985)
                     /locus_tag="WHR07_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEZ2130167.1"
                     /translation="MKQTVKWLAAALIALGLNRAVWADDVSDFRENLQAAAQGNAAAQ
                     YNLGAMYYKGRGVRRDDAEAVRWYRQAAEQGLAQAQYNLGWMYANGRGVRQDDTEAVR
                     WYRQAAAQGVVQAQYNLGVIYAEGRGVRQDDVEAVRWFRQAAAQGVAQAQNNLGVMYA
                     ERRGVRQDRALAQEWFGKACQNGDQDGCDNDQRLKAGY"
     gene            complement(12111..13193)
                     /locus_tag="WHR07_000939"
     CDS             complement(12111..13193)
                     /locus_tag="WHR07_000939"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009310927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEZ2130168.1"
                     /translation="MFLWLAHFSNWLTGLNIFQYTTFRAVMAALTALAFSLMFGPWTI
                     RRLTALKCGQAVRTDGPQTHLVKNGTPTMGGSLILTAITVSTLLWGNWANPYIWILLG
                     VLLATGALGFYDDWRKVVYKDPNGVSAKFKMVWQSSVAIIAGLALFYLAANSANNILI
                     VPFFKQIALPLGVVGFLVLSYLTIVGTSNAVNLTDGLDGLATFPVVLVAAGLAIFAYA
                     SGHSQFAQYLQLPYVAGANEVVIFCTAMCGACLGFLWFNAYPAQVFMGDVGALALGAA
                     LGTVAVIVRQEFVLVIMGGLFVVEAVSVMLQVGWYKKTKKRIFLMAPIHHHYEQKGWK
                     ETQVVVRFWIITIVLVLIGLSTLKIR"
BASE COUNT         3100 a         3811 c         3357 g         2948 t
ORIGIN      
        1 tggcaaacaa aatgccgtct gaaaaccttt cagacggcat ttttaatatc gaatcaatca
       61 gcccaaatac cagaatttca gtgcccacaa tacggcaaca atccatacca taggcggaac
      121 gtctttggtg cggcggcata aaagtttaac cacggcatag ctgatgaagc cgaaagcgat
      181 gccgtctgca atcgaataag taaacggcat gaaaacaatg gtcaggaacg caggtgcggc
      241 ttccgtcata tcgtcccaat caatatcccg ggcactgcgg agcatttgtg tgccgacata
      301 aagcagggcg ggcgcggtgg caaaagcggg aacacttttc gccaaaggtg aaaacatcag
      361 gcaggcgagc atcaatacgc cgacggtaac cgccgtcagg ccggtccgtc cgcctgccga
      421 tacgcccgcc gcgctttcca cataaggcgt ggtggaagaa gtacccaaag ccgcacctgc
      481 cacaatggcg gtagagtctg caagcagtgc gcgtttcagg cggggcagct taccgtccac
      541 cagcagcccg gcacggtggg atatgccgac cagcgttccg gtactgtcaa atagatcgac
      601 caagaagaag acgaaaatca cactgaccat gctgacggta aacaggcctt caaaatccat
      661 ctgcataaaa gtcggcgcaa tgctcggtac ttcgccgatg atgccgtgaa attcattcaa
      721 acccatcagg ctggcaatga cggtaatggt caagatggtg atgatgattg cgccttgaac
      781 gcggaaatgt cccaatacga ccaccatagc aaaaccgaac agtgccaaca acgcggacgg
      841 ctgatgaata tcgcccaaac cgaccaaggt tgccggattg gcaacgataa tgcctgcgcc
      901 tttcagggaa atcagtgcca aaaacaaacc gataccggca gcaatcgaca ttttcaaacc
      961 cataggcagt gcgttgacca gcatttccct gactttaaaa aagctgaaca ggataaaaat
     1021 cagaccggag atgaacaccg cacccaacgc aacctgccaa ggcacgccca tacccttaac
     1081 gacggcaaag gtgaaatagg cattcagccc catccccggt gcgagtgcaa tcggatagtt
     1141 gccgacaaaa cccataacaa aacagccgat ggcagacgcg atacaggtag cgacgaatac
     1201 cgcccccata tccatgccgg tctcgcccaa aatcagaggg ttgacgataa cgatgtagca
     1261 catcgtcaaa aaagttgtca aacccgccat caactcggta cgcaccgtcg taccgtttgc
     1321 cttcagctta aaaatcccgt ccaacagtgt ttgttttgaa gtgtccatat ctgaaagtct
     1381 gtatcaagtg gaaaaatctg aatccgccga ccgcaaaccg tacgaaattg caacatcttg
     1441 aaaaacatac ctcccaaacc ggacaaaccg attcgggagg cagcaggttt acgggcaaac
     1501 agcacattat ttgtctgaat tgtgttgacg acgcaaaatc gcagggattt caaagtcgtc
     1561 aagtacggac tgattgtcga aatccgcagc ggtaaggttc atcgtgcgga taccgcgatt
     1621 ggtgcggatc ataccttcga cattgtggct ttgctcctgt ttggacgggg caaccgcttc
     1681 tacctccctt gccggaacaa aatcgaccgc gcctttttct ttcagaccgg tagcgataat
     1741 ggtaatccgg atggcatctt cgctcatggt ctcgtcttca gccgcaccga atttgcattc
     1801 caaatcggga tgcgcgcttt ggttgacgat tttcatgact tcggacaact cggacatttt
     1861 caagcaaccc ggagcagtcg taatattgac cagcacaccg cgcgctccgt ccaaggttac
     1921 atcgtccagc agcggactgg aaatggcctg gtcggtcgcc atacgcgcac ggtcgatacc
     1981 ttgggcataa cccgaaccca tcatagcgat accgcggttg ctcatcacgg ttttcacgtc
     2041 ggcaaagtcg aggttgatga tttcgctcgg gcaagttacc acttcggaaa tgcctgcgac
     2101 cgcatcgcgc aatacattgt cggcggcacg gaaggcttcg cgcatcgtta cgtcttcacc
     2161 caatgcagtc atcagtttgt cgttcgggat gatgatcagc gaatcgacgt gttctttcaa
     2221 ctgttctaac cctgcctgtg cgacatggac gcgcttacct tcatatgcga acggtcgggt
     2281 aaccacggca acggtcagaa tgcccaaaga cttggcaatc tcagcaacaa ccggcgcgga
     2341 accggtaccg gtaccgccgc ccataccggt cgtgataaac agcatattcg caccgcgaat
     2401 ggcttcttca atggcttccc ggtcttcctg ggctgccgca cggccgatat cgggattcgc
     2461 gcccgcgccc aaaccgcgtg tcagattcgt acccaactgg attctcttcg ccgcatggtt
     2521 ttttgccaga gactgcgcat ccgtattggc actgataaac tccacaccgc gcacattgtt
     2581 ggcaaccatg ttattgattg cattgcaacc gccgccgccc aagccgatta ctttaatcac
     2641 cgcagggctg actgccgatt ctgccacgtc gtaaacaaat tccattcaaa aactcctgct
     2701 cgccccattc agaggacggt ttaaataaat tattattcat tatataagaa gtatcttgct
     2761 gctggcaaaa tacttctcac ctgtcaaacg gcaatccacc tgttcagaag ctgttttcaa
     2821 tccaccgttt caatcttgcc aacaaaccgc cgcccccttc cctctcttgc actgcaccgt
     2881 tttccggctg cggcaagttt ccttccagct tgcatgctgc atgaagcagc ccgatggcgg
     2941 tagaaaaacg cggtgtgcgg acgcggtcgg acaaaccgcc catttcttgg ggtgcaccgg
     3001 tgcgtacagg caaatcgaag attttttcgg caaattccac aatcccggtc atcatggaca
     3061 caccgccggt cagaacgata cccgcattca gcacttcttt ggggaaaccc gatttttgca
     3121 gctcgcccag cactacgcca aaaatctcct gaatacgtgc actgatgatt gctgccaaaa
     3181 ccttactgga aacctgacgc gatgtccggt cacccacgcc cggaacttca atcatctcac
     3241 ccaagccttc cgtatcgcat gatgtcacgc cataatggat tttaatgtac tcggcggcat
     3301 cgagaggtgt tctcaacgat ttggacaaat ctttggtaat cagattacca ccggccggaa
     3361 tgacggacgt atggcggatg gcaccgttca tataaacggc aatatcggtc gttccgccac
     3421 caatgtcgat gacgcatacg ccgaggtctt tttcatcttc agtcagcacc gcctgcccgc
     3481 ttgccaacgg ctgaagcatg atttgatcgc ttttcaagcc gcaccgctcg atacattttt
     3541 ggacattctg cactgccgta cttgcaccgg taatgatgtg cacccgcgta tccagacgca
     3601 caccgctcat accgatgggc tccctcacgc caagttgggt gtcgataatg tagtcttgaa
     3661 ccacggcatc gagaattttt tgatcgggcg ggatattgat tgcctttgcc gtttcaatgg
     3721 cgcggtcgat gtctgcctgc gtgacttccc cgtctttaat tttaaccaca ccttgcgaat
     3781 tgagactgcg gatgtggttg cctgcgatac ctgtggtaac gtgggtaatt ttggtatccg
     3841 ccatcagctc ggcatcattg accgcctgcc tgatggcttg gacggtggca tcgatattgg
     3901 ttaccatgcc cgcgcgcaag ccccgtgaag gagcctgccc caaaccgacg atgttgattt
     3961 tgtcgtcatc ttgaacttcc ccgatcagtg cgaggacttt agacgtaccg atatccagta
     4021 cgctgatgta tctttgctgc tgttccattg ttcgtctgct cttaaaactg attgaaattt
     4081 gcgtcgcacc gtttcagacg gcacggtcgt aatctgtccg atacctgttc ccactattct
     4141 tcggattctt tttcgggtaa accgtcggaa gcatagcgga ctgaaaatcc gtccttatac
     4201 ctcatatcca cataggataa ccgattttta tttttacgca acagatgctg ccacgcttcg
     4261 gtaaaaagcc ggaggcgttt catctcgttt tcccgtccga gcctgacggt gatgccgttg
     4321 tccaaaacga caatccacgc cgaacgtgcc gtataggtca tctctttgat gcccaaaccc
     4381 tgttttgcca aaacagtcga aaattcgtca taacggcgga gcatttcggc agacgttcct
     4441 tccgcgcctc tgaataccgg cattccgggt ctgtccaagc gggcttcaaa aacattgcct
     4501 tcgccgtcca ccaaggcatg gtcgccccaa cgcgcgaccg gcttgcgctc ggtcaggacg
     4561 acctcaaccg tgtcgggaaa acggcggcgc accatgaccg acgcaatcca cggataccgg
     4621 cggtaggcct cctgtgcgcc attgatgtcc gtcctcaaaa tattcccatg gatgtattct
     4681 ttcgccaaac tgcccaatgc cttcttatcg gaataaacca ggttgccctt cagcgacacc
     4741 tgcttgacgg gcagatgatt cgaattgtaa aaccaaacca gcccggacgc agcaagcagc
     4801 atcgccatca tgacaagcag ccagcgcgtc agccgttcca tcgcttcggc attatcccac
     4861 atgtgcggtc ttcaaaattt caatacataa atcggcaaaa cccacgcccg taacggcagc
     4921 ggatttcggt actaaactat ggctcgtcat accgggcagg gtgttgattt ccaacagata
     4981 gagtttgccg tcggtatctt tgaggaaatc gacgcgcacg cagctttccg caccgattgc
     5041 ctgcgcgccg cgaaccgcca gttcgcgcat caggctttct tcggcttcgg tcagatcttc
     5101 cgaaggacat tgataaatgg tgtcgttgcg gttgtacttg gcttcgtagt cataaaactc
     5161 ggtcgcgggg atgatgtgta tgccgggcag gcctttgccg ttcaagacgg ggcaggaata
     5221 ttcgccgccg ccgataaacc gttcggcaat gatttcgccc tgaaggtgtt tcaattcttc
     5281 gtaaacgctt ttcagacggc cttttccttt gacttttacc acgcctacgc tgctgccttc
     5341 ggccgccggt ttcacaaaca tcggcaggcc caatttttct tcgacggcat cgaaatcagt
     5401 gtcgtcgtgc aggacggcga actcgggaac gggcagtccc aatgcctgcc aaatcagttt
     5461 gcagcggtat ttgtccatgc cgatggcgga tgcggcgaca ccgctgccgg tatagggaat
     5521 gcccaacagt tccaatgcac cctgaaccgc cccgtcttcg ccgtaagtac cgtgaaggat
     5581 gttgaatgcc gtctgaaaac cttgtgcctt caattcagac aatggggttt ctttaggatc
     5641 gaaggcatat gcgtctatgc ctttgctttt taaagcattc aaaatggcgg tgccgctgtc
     5701 cagcgagatt tctcgttcgc tggaaaaacc gcccatcaat acggccactt tgccaaaatt
     5761 ctgcattgtt tttgttcttt cctgattgct ttatgcttgt tgccagaggt cgtctgaaac
     5821 ctgatttgcg gtttcagacg acctttatat gatgttccgt ctgtcaggcg ggtgtgcctc
     5881 aaatctgttt cgacaattcc agcagcgcgg cggggacgcg gttgatgctt cccgcaccca
     5941 tattcaacac gatgtcgccg tcctgcaaaa cgttcaacag catttcgggc agatcggcaa
     6001 cgttttcgca gtaaatcggc tcgagtttgc ccaacacgcg gatggcgcgg gcaagagcgc
     6061 gggaatcggc ggcggcaatc ggctcttcac cggcggcata aacttcggtc agcaccagcg
     6121 cgtcaacggt attgaggact ttggtaaagt cttcaaacaa atcgcgcgtg cgggtatagc
     6181 ggtgcggctg gaaggcgagt accaaacgtt tttccggata cgcgccgcgt gcggcggcaa
     6241 gggtcgccgc catttcgacg gggtggtgtc cgtagtcgtc caccaagagc gcggtcccgc
     6301 cgtttggcaa cttgatgtcg ccgtattttt ggaagcggcg gccgacacct tcaaagccga
     6361 gcaagccttt ttggatcgct tcaaccgatg cgccgacttc cagcgccacg ccgatggctg
     6421 ccaatgcgtt cagcacgttg tgtctgccgg gcatattcag cacgacttca aacgacccct
     6481 gctcatgtcc tttcatttga acatggacgg tgaatttcat ttgcgcgccg acgttttcga
     6541 tgtcggtggc gtagatgtcg gcggtatcgt ccaaaccgta agtagcataa ggtttgctca
     6601 ctttgggcaa aatcgcgcgg acgtgttcgc tgtcaataca caaaaaggct ttgccgtaga
     6661 agggcatacg gtggatgaaa tcgataaacg cctgatgcag tttttcgacg ctgtgcccgt
     6721 aggtatccat atggtcttcg tcgatattgg taacgacgga cataatcggt gtcaggtgca
     6781 gaaaggatgc atccgactcg tcggcttcgg caacgatgta ttcgcctttg cccaagcggg
     6841 cgttggtgcc tgcggcgttg agtttgccgc cgataacgaa agtcgggtca agtcctgccg
     6901 cgccgaggat ggaggcggtc aggctggtgg tcgtggtttt gccgtgcgtg ccggcaatgg
     6961 cgatgccgtc acggaagcgc atcaactccg ccaacatcag ggcgcgcgga ataacgggaa
     7021 tttgctgctc caacgcagcg acaacttcgg gattttcttt tttgacggcg gtagaggtaa
     7081 cgacgacatc cgcaccgtta acgtgttcgg cggtatggcc gggataaact tgaatgccca
     7141 ggctgcccaa atgctcggta gcggcattac gcgcctgatc cgaaccggaa actttaaaac
     7201 ccaaattgtg caagacttcg gcgatgccgc tcatgccgac gccgccgata ccgacaaaat
     7261 ggatgttggt aactcgattt ttcatcataa tgttgcgttc cggtggattt tcgatgcgta
     7321 aaggcgttat tttaaagggc tgaccgtttg cgcgccatag ttttctgaca aatatatagc
     7381 ggattgaaat aaaaaacatc catgctgtct ggacggcatt tcagacggca tggttcggca
     7441 gtttacgccg cacacgcaat cgcggcttcg gcaacgtcgt ccgcgctgtg cggcaatgcc
     7501 aaagtacggg cgttttccgc ccatttgaga catttttcgc ggttcaggct gccgaggatt
     7561 tcggcgagtt tttccgccgt caactgggtt tgcggcaaca gcaatcccgc ctccgcctgc
     7621 accataaaac gcgcgttggc ggtttgatgg tcatcaacgg cgtgaggata cggcactaac
     7681 aacgcaccca atcccgccgc cgtcaactcg gcaatcgtca gcgcgccggc acggcaaatc
     7741 accaaatcgg catcgcggta ggcggacacc atatcggtaa taaattccac gcattccgct
     7801 tgcacgccca gcgcgtcgta atccgcctgc aagctgccca gcttgccccg tcccgattgg
     7861 tggtacatct gcggacgcgc attgtcgggc agcaaagcca atgcctgcgg tacggttttg
     7921 ttcaaaacgt ccgcgcccaa actgccgccg accaccaaaa ttttcagacg gccttcacgc
     7981 ccttggaagc gttcggcagg cacgggcagg ttgctaatat cggcgcggac ggggttgccg
     8041 accaagccgc cttcgtggct gaacgctttc ggaaaagcgt acaacacccg cttcgcccag
     8101 cgcgacaggt ggcggttgga caaacctgcc acggcgtttt gctcgtgaat cacaatcggc
     8161 acgcctaata gcttcgccgc caaaccgccg gggaaggtaa cgaagccgcc gaagccgatg
     8221 acgcactcga cacggtgttt gcggataatc cgctgcgctt cgcggacggt ttgatacaaa
     8281 gtaaacggca gcatcagctt gcgtttgatg ccgttgccgc gcacgccttt aatcgccagc
     8341 gtttccaagc gtatgccgta ttgcggcacg atacgctctt ccatcgaatc cttgctgccc
     8401 agccaaatca catgatggcc gcgcgcgcgc aatgaatccg ccaccgccag cgcggggaaa
     8461 atatgtccgc ccgttccgcc cgccatcagc ataaaggttt taccgcccat gatttactcc
     8521 acccgataac cgcgcatttt ccggcggttt tcataatcta tacgcaacag cagcatcata
     8581 ctgatcagca tgaaaaagac tgacgaaccg ccataggaca tcaacggcag cgtcagacct
     8641 ttggtcggca aagcaccgat gttcacaccg atattgaaga aactttggat accgatccaa
     8701 atgccgatac ccgaagcgat ataggcgttg aaagtcaaac ccaaatcgcg cgactgcttg
     8761 ccgatggaaa acgcccgcac caccagccag ccgtaacaga atatcagcac acacataccg
     8821 aagaaaccga attcttcggc gatgatggca aaaataaaat cggtatgcgc ttccggcaga
     8881 aagccgcgtt tgctcaaact cgcacccaaa cccataccga accactctcc gcgcccgatt
     8941 gccatcagag agtgggtaag ctggtagccg gcaccctgag ggtctttcca cgggtccaaa
     9001 aatgccacta cccgctgcac acggtaggga gcggcggtaa tcatcagcac catcccgccc
     9061 aagacgctgc ctaccaggac gaaaaaatat ttccacggca atcctgccag aaacagcatt
     9121 ccaacggcaa tgacggtaat gacgacaaac gaaccgaaat ccggctgtac cattatcagc
     9181 accaaaccga acgccaccag cataatcggc aggatgatcg cccggaaacg gccgtacatt
     9241 tctaatgttt cacgacgtgc ctgcggattg gtggcggaca tgatcagatt ggccgtcccc
     9301 cgccaaatcg actgccaacc caaactttcc atgctgcgca acacttcttc acggcgcgtg
     9361 aacaggcttg ccaaataaag gatgaccgcc agcttgaaca gctcggtcgg ctggaaattc
     9421 aacggaccca aaggtatcca acgggtcgcg ccattgattt cgcgcccggc aatcaatacg
     9481 actaccagca acaggccgga tagggcaaaa atccacggca caagccgccg ccatgtcctc
     9541 atcctgcaaa gaaaccataa aaaaccgctc gctatcaagc cggcaacgac gaaccccgcc
     9601 tgtctggtca aatagaaaaa ctgatcgccg ccttcttttg atgccaaata cacagaagcc
     9661 gaataaatca tcagcaggct gaacgccgtc atcagcacta ccatccacaa aagcggcgcg
     9721 tcgaatttcc tgccgtcgcg cacaatcggc ctgtcgagca gcagagtgtg gacaccgtcg
     9781 cccactttta ccaatacttc cgaaatcttc aaaaaaacca cctgccagtc tgtttgcacc
     9841 tgccgcaaag ggcaaaaatt tcagacggca gacaatgccg tccgaacata cgatacatcc
     9901 caaatcggta ttctaaatct ttacttgccg cccaacaatg acggcgtttg cgtttcagac
     9961 ggtatcacaa agccttaaac gccccgataa acacttccga acggtgcgca tagcctttaa
    10021 acatatcgaa gcttgcgcag gcggggctga gcaacacgat gtcgcccgct tcggcttggg
    10081 cgtatgccgt ctgaaccgct tcttccaaag tggcgcagtc ggtcatattc agatcgcagc
    10141 cgtccaaatc gcggcggatt tgcggcgcat cgacaccgat caggaacacg ccttttgcct
    10201 tgccgacaag cgcgtcgcgc aggggcgtga agtcctgccc tttgcccatg ccgcctaaaa
    10261 tcacgaagag cggattttgc aaaccggcaa tcgcggcggc agtcgcgccg acgttcgtgc
    10321 ctttgctgtc gtcgatgaac accacgccgt ttttctcgcc gattttttcc acgcggtgcg
    10381 gcaggccttg aaaggttttg acgtgttcga gcaatgcttc gcgcggcaaa ccgacggctt
    10441 cgcacaaggc aacggcagcc atcacgttgg tagcgttgtg caagccttgc aacggaatat
    10501 cttgcgtggc aatcaaatct tcattgcctt gtttcaggcg gcctgtctcg cgttccaacc
    10561 aaaaatcggc ttcgtgttcc aacgaaaacc atttcacctc gcgcccggcg cgcttcatgg
    10621 cgcggcagaa cacgtcgtcc gcattcaaaa cctgcacgcc atcgccacgg aaaatcttgg
    10681 ctttggtatg cgcgtagtcg agcaagtcgt cgtagcggtc gagatggtct tcggaaatgt
    10741 tcagcaccgt cgccgcagtc gggcgcaggc tttcggtgtt ttccagttgg aagctggaaa
    10801 gctccaacac ccacacgtcc gcctttttgc cttcgcgctg ccattccgcc tccaaaaccg
    10861 gcgtgccgat attacccgcg ataacggtat ccagcccgca cttgatgcag agatagccga
    10921 ccaggcttgt taccgtggtt ttgccgttgc tgccggtaat cgcaatcacc ttgtcgcctc
    10981 ggcggttcac aatgtccgcc agcaattcga tgtcgcccaa cacgcgcccg ccgttttgct
    11041 tgaacgcctc gatatccggc tgccgctcgc tgatgccggg gctgagtgcc agaatatcga
    11101 aaccgttgtc cagcgcatct ttcagacggc ctgtataaaa caccagcccg tcaaacatct
    11161 taccgatttg cgacacgcgc tccggtttca gctccgcatc atacgcggca acctccgcgc
    11221 cgtttttgcg caggtaggca atcatggaaa tgcccgtacc gccgagtccg gcgacgagga
    11281 ttttttggtt ttggaaagtc attttggttt tgccctaaaa caaatcatat tgagcagggg
    11341 ggatgtccgc tcctgctcaa gccactttca gacagcatcg cgagccgatt aataacccgc
    11401 cttcaggcgt tggtcattgt cgcagccgtc ttggtctccg ttttgacaag ccttgccaaa
    11461 ccattcttgt gcaagggcgc ggtcttggcg cacgccgcgt ctttcggcat acatcacgcc
    11521 caaattgttt tgggcttggg ctaccccctg cgctgccgcc tgccgaaacc atctgaccgc
    11581 ttcgacatcg tcttggcgca ctccacgtcc ttcggcatat atcacgccca aattgtattg
    11641 ggcttggaca accccctgcg ctgccgcctg ccgataccat ctgaccgctt cggtatcatc
    11701 ttggcgcacg ccgcgcccgt tggcatacat ccagcccaaa ttgtattggg cttgggctaa
    11761 cccctgttcc gccgcctgcc gataccatct gaccgcttca gcatcatccc ggcgcacgcc
    11821 gcgtcctttg taatacattg cgcccaaatt gtattgggct gctgcatttc cctgtgctgc
    11881 cgcctgcaag ttttcccgaa aatccgatac gtcatccgcc cacaccgctc ggttcaagcc
    11941 caaggcaatc agggcggcgg caagccattt gactgtctgt ttcatggttt tacttctgtt
    12001 ttagtataag gcgggtttca gccaccgtta acgatagggc tgggcggatt gtcgccgcag
    12061 gtttattgcg cgttcaaatg ccgtctgaaa gatgttcaga cggcataggt tcagcggatt
    12121 ttgagggtac tcaaaccgat caacaccaag acgatggtaa taatccaaaa gcggacgacg
    12181 acttgggttt ctttccagcc tttttgttcg tagtggtgat ggatgggcgc catcaggaag
    12241 atgcgttttt tggttttctt ataccagcca acctgaagca taacggatac ggcttctacg
    12301 acaaataatc cgcccataat gacgaggaca aactcttggc ggacgatgac ggcaacggta
    12361 ccgagcgcgg cacccaatgc caatgcaccg acatcgccca taaagacttg cgcgggatag
    12421 gcgttaaacc acaagaaacc gaggcacgcg ccgcacatgg cggtacagaa aatcaccact
    12481 tcgtttgcgc cggcaacgta aggtaattgc aggtattggg caaattgtga gtggccgctg
    12541 gcataggcga agatggcgag gccggcagca acgaggacga cggggaaggt cgcaaggccg
    12601 tccaagccgt cggtgaggtt gacggcgttg gatgtgccga cgatggtcag gtaggacaac
    12661 accaaaaagc cgaccacgcc cagcggcagg gcgatttgtt tgaagaacgg gacaatcaaa
    12721 atattgttgg cggaattggc ggcaaggtaa aacaatgcca aaccggcgat aatggcaacg
    12781 cttgactgcc acaccatttt gaatttggcg gacacgccgt tggggtcttt atagacgact
    12841 ttgcgccagt cgtcgtaaaa accgagcgca ccggtggcaa gcagtacgcc caagagaatc
    12901 cagatatacg ggttcgccca gttgccccac aacagagtgg acacggtaat ggcggtcaga
    12961 atcagcgaac cgcccatcgt cggcgtgccg tttttgacga ggtgggtttg cgggccgtcg
    13021 gtacgcactg cctgcccgca tttgagcgcg gtcagcctgc gtatcgtcca cgggccgaac
    13081 atcagggaaa acgctaaggc ggtcaacgcc gccatgacgg cgcggaatgt ggtgtattga
    13141 aaaatattca gaccggttaa ccagttgctg aaatgtgcga gccataaaaa catggggctt
    13201 cctttttttg ttttgt
//
LOCUS       DAWGKF010000048        13173 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.048, whole genome shotgun sequence.
ACCESSION   DAWGKF010000048 DAWGKF010000000
VERSION     DAWGKF010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13173)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13173)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13173
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.048"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(47..1330)
                     /gene="hemL"
                     /locus_tag="WHR07_000940"
     CDS             complement(47..1330)
                     /gene="hemL"
                     /locus_tag="WHR07_000940"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HEZ2130169.1"
                     /translation="MNRNEILFDRAKAIIPGGVNSPVRAFGSVGGVPRFIKKAEGAYV
                     WDENGTRYTDYVGSWGPAIVGHAHPEVVEAVREAALGGLSFGAPTEGEIAIAEQIAKI
                     MPSVERLRLVSSGTEATMTAIRLARGFTGRDKIIKFEGCYHGHSDSLLVKAGSGLLTF
                     GNPSSAGVPADFTKHTLVLEYNNIAQLEEAFAQSGNDIACVILEPFVGNMNLVRPSEA
                     FVKALRELTEKHGAVLIYDEVMTGFRVALGGAQSLHGITPDLTTMGKVIGGGMPLAAF
                     GGRKDIMECISPLGGVYQAGTLSGNPIAVAAGLKTLEIIRREGFYENLTARTEQLVQG
                     FQTAADAAGIEFAADSVGGMFGLYFASHTPRNYADMARSNIDAFKRFFHGMLDRGIAF
                     GPSAYEAGFVSAAHTPELIDETVAVAVEVFKAMAA"
     gene            complement(1394..1807)
                     /locus_tag="WHR07_000941"
     CDS             complement(1394..1807)
                     /locus_tag="WHR07_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HEZ2130170.1"
                     /translation="MKPAVWAALLLCACTSNFGDREHQFLRDQTEEKIVQFAVRGKTT
                     RAEVEARFGRQNPFGCYAYHEVSLPIYNFLPTNFIYMKSERRHWEWCVDYDGEGVVRD
                     YRFTHKVEKDERSVIRDAVGVIRKEAGKSLSQPEK"
     gene            2010..3338
                     /gene="miaB"
                     /locus_tag="WHR07_000942"
     CDS             2010..3338
                     /gene="miaB"
                     /locus_tag="WHR07_000942"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEZ2130171.1"
                     /translation="MKKVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADII
                     LFNTCSVREKAQEKVFSDLGRVRPLKEKNPGLIIGVAGCVASQEGENIIKRAPYVDVV
                     FGPQTLHRLPKMIVDKETSGLSQVDISFPEIEKFDHLPPARVEGGAAFVSIMEGCSKY
                     CSFCVVPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEICDF
                     ATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSA
                     MKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSF
                     VFIYSPRPGTPAANLPDDTPHEEKVRRLEALNEVIEAETARINQTMIGTVQRCLVEGI
                     SKKDPDQLQARTANNRVVNFTGTPDMINQMIDLEITEAYTFSLRGKVVEA"
     gene            complement(3423..5336)
                     /gene="dxs"
                     /locus_tag="WHR07_000943"
     CDS             complement(3423..5336)
                     /gene="dxs"
                     /locus_tag="WHR07_000943"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEZ2130172.1"
                     /translation="MNPSPLLDLIDSPQDLRRLDKKQLPRLAGELRAFLLESVGQTGG
                     HFASNLGAVELTIALHYVYNTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAG
                     FPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGSDRRSVAIIGDGAMTAGQAFEAL
                     NCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDMHGLLSTVKAQTGKVLDKI
                     PGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLEDLR
                     GRKGPQLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQMPSEKEPKPAAKPTYTQ
                     VFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLA
                     CEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSF
                     LRCVPNMIVAAPSDENECRLLLSTCYQADAPAAVRYPRGTGTGVPVSDGMETVEIGKG
                     IIRREGGKTAFIAFGSMVAPALAVAEKLNATVADMRFVKPIDEELIVRLARSHDRIVT
                     LEENAEQGGAGGAVLEVLAKHGICKPVLLLGVADTVTGHGDPKKLLDDLGLSAEAVER
                     RVRAWLSDRDAAN"
     gene            complement(5421..6338)
                     /gene="xerC"
                     /locus_tag="WHR07_000944"
     CDS             complement(5421..6338)
                     /gene="xerC"
                     /locus_tag="WHR07_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HEZ2130173.1"
                     /translation="MVLDGFAAHFDAYLENIVREGKSEHTVAAYRRDLEELFALLAQM
                     PSEDAGGVPQDLSRRDFTAALRRLSQRGLNARTLARKLSSWRQYCVWLVERGLLHTDP
                     TADIKPPKQPERVPKALPQEWLNRMLDLPVDGGDPLAVRDHALFELMYGSGLRVSEIH
                     GLNADDVYLDEAWVHVTGKGRKQRQVPLTGKSVEALKNYLPLRQTASDGKALFTGRNG
                     TRLSQRQIQKRLAQWAAQNGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLS
                     TTQIYTKLDFDHIARLYDEAHPRAKRQDE"
     gene            6532..7596
                     /locus_tag="WHR07_000945"
     CDS             6532..7596
                     /locus_tag="WHR07_000945"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-bisphosphate aldolase class II"
                     /protein_id="HEZ2130174.1"
                     /translation="MALVSMRQLLDHAAENSYGLPAFNVNNLEQMRAIMEAADQVDAP
                     VIVQASAGARKYAGAPFLRHLILAAVEEFPHIPVVMHQDHGASPDVCQRSIQLGFSSV
                     MMDGSLMEDGKTPSSYEYNVNATRTVVNFSHACGVSVEGEIGVLGNLETGEAGEEDGV
                     GAVGKLSHDQMLTSVEDAVRFVKDTGVDALAIAVGTSHGAYKFTRPPTGDVLRIDRIK
                     EIHQALPNTHIVMHGSSSVPQEWLKVINEYGGNIGETYGVPVEEIVEGIKHGVRKVNI
                     DTDLRLASTGAVRRYLAENPSDFDPRKYLSKTIEAMKQICLDRYLAFGCEGQAGKIKP
                     VSLEKMASRYAKGELNQIVK"
     gene            7616..8614
                     /locus_tag="WHR07_000946"
     CDS             7616..8614
                     /locus_tag="WHR07_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="factor H binding family protein"
                     /protein_id="HEZ2130175.1"
                     /translation="MPSEPPFGRHLIFAFLTCLIDAVCKKRYHNQNVYILSILRMTRS
                     KPVNRTTFCCLSLTAALILTACSSGGGGSGGGGGGGGVTADIGTGLADALTAPLDHKD
                     KGLQSLTLDQSVRKNEKLKLAAQGAEKTYGNGDSLNTGKLKNDKVSRFDFIRQIEVDG
                     RLITLESGEFQVYKQSHSALTALQTEQVQDSEDSGKMVAKRRFRIGDIAGEHTSFDKL
                     PKGGSATYRGTAFGSDDAGGKLTYTIDFAVKQGHGKIEHLKSPELNVELATADIKPDE
                     KHHAVISGSVLYNQDEKGSYSLGIFGGQAQEVAGSAEVETANGIHHIGLAAKQQPL"
     gene            8751..9428
                     /gene="tsaB"
                     /locus_tag="WHR07_000947"
     CDS             8751..9428
                     /gene="tsaB"
                     /locus_tag="WHR07_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HEZ2130176.1"
                     /translation="MQADFNRPVLAVDTGTSYLSLALRADGETRLFHQEVGSRQSELI
                     LPEIRTLFRDAGITAADLGAVVYAQGPGAFTGLRIGIGVAQGLATPFDTPLIGIPTLD
                     AAASMPPPQSCILAAADARMGEVFYAWFDTLNRRRLSDYQVGRAADITLPEGHVFSDG
                     IGNAFALENRPPFSGKPDMPTAADFLNLAAEGGFPAVAAAHAELLYVRNKIALTAKEQ
                     AERKART"
     gene            9425..9865
                     /gene="rimI"
                     /locus_tag="WHR07_000948"
     CDS             9425..9865
                     /gene="rimI"
                     /locus_tag="WHR07_000948"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HEZ2130177.1"
                     /translation="MNIRRASPSDCAALAALDAVCNPSAWTQRQFESALVSPSEQVFL
                     AEKDGRLAAFIVWQNLPDESELHLIATAPAYRRRGVASALLEYWFAHLPEGTQRLLLE
                     VRAGNTAAQALYTAHGFSIAGRRKNYYRATDGQTEDAVLMEKIC"
     gene            9859..10593
                     /locus_tag="WHR07_000949"
     CDS             9859..10593
                     /locus_tag="WHR07_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HEZ2130178.1"
                     /translation="MLSARYLHLHEALGLGPMWLKQAAAVLPPKNTPATPAQARPQTV
                     RAAPIRPSQPHNGQARLETMKALETAAVPTRKPAPETETPLPGLSDGIAPVPAASGIT
                     KLAVVSLCPPIEDAVYGQLFYGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMP
                     SEQAVADALGQIARELDGCRAPAVLFLGQAFVQPERQAIIETLCGSRPFFIIDHPARL
                     LRQPELKARNWQVLKQLKHALQAGGS"
     gene            10655..11296
                     /gene="pyrE"
                     /locus_tag="WHR07_000950"
     CDS             10655..11296
                     /gene="pyrE"
                     /locus_tag="WHR07_000950"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEZ2130179.1"
                     /translation="MTDFRQDFLKFSLAQNVLKFGEFTTKAGRQSPYFFNAGLFNDGL
                     STLQLAKFYAQSIIESGIRFDMLFGPAYKGIILAAATAMMLAEKGVNVPFAYNRKEAK
                     DHGEGGVLVGAPLKGRVLIIDDVISAGTSVRESIKLIEAEGATPAGVAIALDRMEKGT
                     GELSAVQEVEKQYGLPVAPIASLNDLFILLQNNPEFGQFLEPVRAYRRQYGVE"
     gene            11370..11804
                     /locus_tag="WHR07_000951"
     CDS             11370..11804
                     /locus_tag="WHR07_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130180.1"
                     /translation="MPACFCPHCKTRLWVKETQLNVAQGFVVCQKCEGLFKAKDHLAS
                     TKEPIFNDLPEAVSDVKLVHRIGTRAIGKKQISRDEIAGILNGGTTQPDIPPATAATP
                     AAAPQVTVPPAAPARQEGFNWTIATLFALIVLIMQLSYLVIL"
     gene            11801..13111
                     /gene="argA"
                     /locus_tag="WHR07_000952"
     CDS             11801..13111
                     /gene="argA"
                     /locus_tag="WHR07_000952"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HEZ2130181.1"
                     /translation="MIVPDLFVAHFREAVPYIRQMRGKTLVAGIDDRLLEGDTLNKLA
                     ADIGLLSQLGIRLVLIHGARHFLDRHAAAQGRTPHYCRGLRVTDETSLEQAQQFAGTV
                     RSRFEAALCGSVSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRF
                     QLDAGNIVWLPPLGHSYSGKTFYLDMLQTAASAAVSLQAEKLVYLTLSDGISRPDGTL
                     AETLSAQEAQSLAEHAGGETRRLISSAVAALEGGVHRVQILNGASDGSLLQELFTRNG
                     IGTSIAKEAFVSIRQAHSGDIPHIAALIRPLEEQGILLHRSREYLENHISEFSILEHD
                     GNLYGCAALKTFTEADCGEIACLAVSPQAQDGGYGERLLAHIIDKARGIGISRLFALS
                     TNTGEWFAERGFQTASEDELPETRRKDYRSNGRNSHILVRRLHR"
BASE COUNT         2953 a         4099 c         3473 g         2648 t
ORIGIN      
        1 caatctgcca aacagatcga acagagaaac tctgtccgtc aaaacatcat gcagccatcg
       61 ccttgaacac ttcaaccgca accgcaaccg tttcgtcaat cagctcgggc gtatgcgcgg
      121 cagaaacgaa acctgcttca taagcggacg ggccgaaggc aatgccgcgg tcgagcatac
      181 cgtggaagaa gcgtttgaaa gcgtcaatat tggaacgcgc catatcggca tagtttcgcg
      241 gcgtatggct ggcaaaatac aggccgaaca tcccgcccac gctgtcggcg gcgaactcga
      301 tgcccgccgc atccgctgcc gtctgaaaac cttgaaccaa ctgttcggta cgcgccgtca
      361 ggttttcata aaacccttcg cggcggatga tttccagcgt tttcaaaccg gcggcgacgg
      421 caatcgggtt gcctgataat gtacctgcct gatacacgcc gcccagtggg gaaatacatt
      481 ccataatgtc tttgcgcccg ccgaacgcgg caagcggcat accgccgccg atgactttgc
      541 ccatcgtggt caggtcgggc gtgatgccgt gcagcgattg tgcgccgccg agcgcgacgc
      601 ggaaaccggt catcacttcg tcgtaaatca acaccgcgcc gtgtttttcg gtcaattcgc
      661 gcaaggcttt gacaaaggct tcagacggcc taaccagatt catattgccg acaaaaggct
      721 ccaaaatcac acaggcaatg tcattgccgc tttgagcaaa ggcttcttcc agttgggcga
      781 tattgttgta ctcgaggact aaagtgtgtt tggtaaagtc ggcaggcacg ccggcggaag
      841 acgggttgcc gaacgtcagc agaccgctgc cggctttcac caacaggctg tcggaatggc
      901 cgtggtagca gccttcaaat ttgatgattt tgtcgcggcc ggtaaaaccg cgtgccagac
      961 ggatggcggt catagtggct tcggtaccgg agctgacaag gcgcagccgt tcgacggacg
     1021 gcatgatttt ggcgatttgt tcggcaatgg cgatttcgcc ttcggtgggc gcgccgaacg
     1081 acaaaccgcc caacgcggct tcgcgcacgg cttcgacgac ttcggggtgc gcgtgtccga
     1141 caatcgcagg cccccaagag ccgacatagt cggtataacg cgtgccgttt tcgtcccaaa
     1201 catacgcgcc ttcggctttt ttgatgaagc gcggcacgcc gccgacgctg ccgaatgcgc
     1261 ggacggggga attcacgccg ccggggatga tggctttggc gcggtcgaat aaaatttcgt
     1321 tacggttcat atttatcctc aaatgccgcc tgaacggcag gtttcgggct tagaagcaga
     1381 aagtcccatt ttatcatttt tcaggttgcg acaaggattt gcctgcttct ttgcggatga
     1441 cgccaaccgc atcccggatg acggaacgct cgtctttttc cactttatgt gtaaagcggt
     1501 agtcccggac aactccctcc ccgtcgtaat ccacacacca ctcccaatgc cggcgttctg
     1561 atttcatata aatgaaattg gtcggcaaaa aattataaat aggcaggctg acctcgtgat
     1621 aggcataaca gccgaacgga ttttgccgcc cgaaacgcgc ttccacttcc gcccgggtcg
     1681 tcttgcccct aaccgcaaac tgcacgattt tttcttccgt ctgatcacgc aggaactgat
     1741 gttccctgtc gccgaaattg ctggtacacg cacacagcag caatgccgcc cacacagccg
     1801 gtttcataca cacctcccat taaagccaaa cattatacag ccgtcccgac cgattaaatt
     1861 catattttaa aacaatattc tgtttacaaa acccacatcg tgctataatc cgcaccgatt
     1921 ttcagacggc atcgtcatgc cgtctgaaat tttttcattc caacaacaat cagccccgcg
     1981 attacggctg cctgagaaag acacaaacca tgaaaaaagt atttatccgc accttcggct
     2041 gccagatgaa cgaatacgac agcgacaaaa tgctcgccgt cctcgccgaa gaacacggcg
     2101 gcatcgaaca ggttacccaa gccgacgaag ccgacatcat cttgttcaac acctgctccg
     2161 tgcgcgaaaa agcacaggaa aaagtgttct ccgatttggg gcgcgtgcgt ccgctcaaag
     2221 aaaaaaaccc cggccttatc atcggcgttg ccggctgcgt cgcctcgcaa gaaggcgaaa
     2281 acatcatcaa acgcgcgcct tatgttgacg tggttttcgg cccgcaaacg ctgcaccgcc
     2341 tgcccaaaat gattgtggac aaagaaacca gcgggctgtc gcaagtcgat atttccttcc
     2401 ccgaaatcga aaaattcgac cacctgccgc ccgcccgcgt cgaaggcggc gcggcatttg
     2461 tatcgattat ggaaggctgt tccaaatact gctccttctg cgtcgtcccc tacacgcgcg
     2521 gcgaagaatt ctcccgcccg ctcaacgacg tattgacaga aatcgccaac cttgcccagc
     2581 aaggcgtgaa agaaatcaac ctcttgggac aaaacgtcaa cgcctatcgc ggcgaaatgg
     2641 acgacggcga aatctgcgac tttgccactt tgttgcgcat cgtccacgaa atccccggca
     2701 tcgaacgtat gcgctttacc accagccatc cgcgcgagtt taccgactcg attatcgagt
     2761 gctaccgcga cctgccgaag ctggtttccc acctgcacct gccgattcaa agcggttccg
     2821 accgcgtatt gagcgcgatg aaacgcggct acaccgcttt ggaatacaaa tccatcatcc
     2881 gcaaactgcg tgccatccgt cctgatttat gcctgagcag cgatttcatc gtcggcttcc
     2941 ccggcgagac cgaacgcgag ttcgagcaaa ccttgaaact ggtgaaagac atcgccttcg
     3001 acttgagctt cgtgtttatt tacagtccgc gccccggcac gcctgccgcc aacctgccgg
     3061 acgacacgcc gcacgaagaa aaagtgcgcc gcctcgaagc cttgaacgaa gtcatcgaag
     3121 ccgaaaccgc gcgcatcaac caaaccatga tcggcacggt tcaacgctgc ctggtcgaag
     3181 gcatctccaa aaaagacccc gaccaactgc aagcccgtac cgccaacaac cgcgtcgtca
     3241 acttcaccgg cacgcccgac atgattaacc aaatgatcga tttggaaatc accgaggcct
     3301 acaccttctc cctgcgcggc aaagttgtcg aagcctaaac cctcacgccg aaaaaatgcc
     3361 gtctgaagcg tttcagacgg cattttgcct tgtatcggca gacgatggcg cggccgggcg
     3421 gcttaatttg ccgcatcccg atccgacaac cacgcgcgca cacgccgttc caccgcttcg
     3481 gcactcaagc ccaaatcgtc taaaagtttt ttcggatcgc cgtgtccggt tacggtatcg
     3541 gcaacgccca aaagcaaaac gggtttgcag atgccgtgtt tcgccaatac ttccagcacc
     3601 gcgccgcctg cgccgccctg ttcggcgttt tcttcaaggg taacgatgcg gtcgtggctt
     3661 cgggcaaggc ggacaatcaa ctcttcgtct atcggtttga cgaagcgcat atcggcgacg
     3721 gtggcgttca gtttttcggc aaccgccaat gcgggggcga ccatactgcc gaaggcaatg
     3781 aatgcggttt tcccaccttc gcggcggata atgcccttgc cgatttccac ggtttccatg
     3841 ccgtctgaaa ccggcacgcc cgtacccgtg ccgcgcggat agcggacggc ggcgggcgcg
     3901 tctgcctgat agcaggtcga aagcagcagg cggcattcgt tttcatcgct cggcgcggcg
     3961 acaatcatgt tcggcacgca gcgcaaaaag ctcaaatcgt acagaccggc atgggtcggg
     4021 ccgtccgcgc cgacgatgcc cgcgcggtcg acggcaaaca aaacgggtag gttttgcagg
     4081 gcgatgtcgt gcaccagttg gtcgtaggcg cgttgtaaaa aggtggaata aatcgccacg
     4141 acgggcttca tcccttcgca agccaaaccg ccggcaaagg taacggcgtg ctgctcggca
     4201 ataccgacat cgaaatagcg gtcggggaat cgttgttcaa actcaaccaa gccgctgccc
     4261 tcgcgcatgg cgggggtaat cgcaaccagt cgggaatctg ccgccgcccg gtcgcacagc
     4321 catttgccga acacttgggt ataggtcggt ttggcggcgg gcttgggttc tttttcagac
     4381 ggcatttgcg ccgcgctttc tttaggcagg ttggcgacgg cgtggtattt gacgggatcg
     4441 ttttcggcga gtttgtagcc gttgcccttt ttggtgatga cgtgcagaag ctgcgggcct
     4501 ttgcgtccgc gcaggtcttc caatacatcg accagatttt cgacgttgtg tccgtccacg
     4561 gggccggtat agcggaagcc gaagttttca aacaaagaca gtgactgttt ggcgtgttcg
     4621 gcttcttcgg caagggtttt gattttgtgt tcgacttttt gggcaaactc catcgcgccg
     4681 ggtattttgt ctaatacctt gcccgtttgc gctttgacgg tactcaacag gccgtgcata
     4741 tcgcgcacga cgttgctggc aaggtatttc ggcagcgcgc cgacgttggg ggaaatcgac
     4801 atttcgttgt cgttgaggac gaccagcaaa tccacatcca tatcgcctgc gcaattcaag
     4861 gcttcaaacg cctgccccgc cgtcatcgcg ccgtcgccga tgatggcgac gctgcggcgg
     4921 tcgctgccca agagtttgtc tgccgccgcc atgcccaacg ccgcgccgat ggaggtggag
     4981 gaatgcccca cgccgaacgc gtcgtactcg gactcgcaac gtttcggaaa acccgccaaa
     5041 ccgccgtatt ggcgcatggt gtgcatctgg tttttgcgtc cggtaaggat tttgtgcgga
     5101 tagctttggt gtccgacatc ccacaccagc ttgtcttcgg gcgtgttgta cacatagtgc
     5161 agggcgatgg tcagctcgac cgcacctaag ttgctggcga aatgaccgcc ggtttgaccg
     5221 acggattcca gcagaaaggc gcgcaactcg ccggcaaggc gcggcagctg ttttttgtcc
     5281 agacggcgca aatcttgcgg gctgtcaatc aggtcgagta gggggcttgg gttcatggtg
     5341 tgtctttttt atgtgtcgtc cgggtgcaac ggccaattat atatcaagag tgtgcggctg
     5401 acggctgatt ttgccgtatg tcattcgtcc tgccgcttgg cgcgcgggtg ggcttcgtca
     5461 tacaggcggg cgatgtggtc gaaatcgagt ttggtgtaaa tctgcgtggt cgaaaggctg
     5521 ctgtgcccga gcagctcctg caccgccctg atgtcgcgcg aagcctgcaa caggtgtccg
     5581 gcgtagctgt ggcgcatcat atgcggcgaa acgtgcctgc cgtcgccgtt ttgcgccgcc
     5641 cattgcgcca aacgtttttg gatttggcgt tggctcaggc gcgtgccgtt cctgccggta
     5701 aacagggctt tgccgtccga tgccgtctga cgcagcggca gatagttttt cagggcttcc
     5761 acgcttttgc cggtcagcgg cacctgccgc tgcttgcgcc ctttgccggt aacgtgtacc
     5821 cacgcctcgt ccaaatagac atcatctgca ttcaagccgt gtatctcgct cacgcgcaaa
     5881 ccgctgccgt acatcagttc gaacagggcg tggtcgcgca ccgccagcgg gtcgccgccg
     5941 tccacgggca aatccagcat ccggttcagc cattcctgcg gcagtgcttt gggtacgcgc
     6001 tcgggctgct tcggcggttt gatgtcggcg gtcgggtcgg tatgcagcag accgcgttcc
     6061 accagccaaa cacaatactg ccgccaagac gacagcttgc gcgccagcgt ccgcgcattc
     6121 aaaccgcgct gcgacagccg ccgcaacgcc gccgtaaaat cgcgccgcga caagtcctgc
     6181 ggcacgccgc ctgcatcttc agacggcatt tgtgccaaca gcgcaaacag ttcttccaaa
     6241 tcgcgccggt atgccgccac cgtgtgctcc gacttgccct cgcgcacgat gttttccaaa
     6301 taagcgtcaa aatgcgccgc aaacccgtcc aaaaccataa ccgccccaca caaatatcaa
     6361 aaaaacagtg aaaacattat cataaacgac acaccaaaac cccgaaccgc ccaaaatccg
     6421 acccgtccgc ccgccgttat cgttaacata aaatcaatga gccgtttatg gttttttgcc
     6481 gtaaaaaaca ttataatccg ccttatttac ctattgccca aggagacata aatggcactc
     6541 gtatccatgc gccaactgct tgatcatgct gccgaaaaca gctacggcct gccagcgttc
     6601 aacgtcaaca acctcgaaca gatgcgcgcc atcatggagg ctgcagacca agtcgacgcc
     6661 cccgtcatcg tacaggcgag tgccggtgcg cgcaaatatg cgggtgcgcc gtttttacgc
     6721 cacctgattc tggcggctgt cgaagaattt ccgcacatcc ccgtcgtcat gcaccaagac
     6781 cacggcgcat cgcccgacgt gtgccaacgc tccatccaac tgggcttctc ctccgtgatg
     6841 atggacggct cgctgatgga agacggcaaa accccttctt cttatgaata caacgtcaac
     6901 gccacccgta ccgtggttaa cttctcccac gcttgcggcg tatctgttga aggcgaaatc
     6961 ggcgtattgg gcaacctcga aaccggcgaa gcaggcgaag aagacggtgt aggcgcagtg
     7021 ggcaagcttt cgcacgacca aatgctgacc agcgtcgaag atgccgtacg tttcgttaaa
     7081 gataccggcg ttgacgcatt ggcgattgcc gtcggtacca gccacggcgc atacaaattc
     7141 acccgtccgc ccacaggcga cgtattgcgt atcgaccgca tcaaggaaat ccaccaagcc
     7201 ctgcccaata cacacatcgt gatgcacggc tccagctccg ttccgcaaga atggctgaaa
     7261 gtcatcaacg aatacggtgg caatatcgga gaaacctacg gcgtgccggt tgaagaaatc
     7321 gttgaaggca tcaaacacgg cgtgcgcaaa gtcaacatcg ataccgactt gcgccttgct
     7381 tccaccggcg cggtacgccg ctaccttgcc gaaaacccgt ccgactttga cccgcgcaaa
     7441 tacctgagca aaaccattga ggccatgaag caaatctgcc tcgaccgtta tcttgcgttc
     7501 ggttgcgaag gtcaggcagg caaaatcaaa cctgtttcgt tggaaaaaat ggcaagccgt
     7561 tatgccaagg gcgaattgaa ccaaatcgtc aaataacagg ttgcctgtaa acaaaatgcc
     7621 gtctgaaccg ccgttcgggc ggcatttgat ttttgcattt ttgacctgcc ttattgatgc
     7681 agtatgcaaa aaaagatacc ataaccaaaa tgtttatata ttatctattc tgcgtatgac
     7741 taggagtaaa cctgtgaacc gaactacctt ctgttgcctt tctctgaccg ccgccctgat
     7801 tctgaccgcc tgcagcagcg gaggaggcgg aagcggaggc ggaggcggag gcggcggtgt
     7861 caccgcagac atcggcacgg ggcttgccga tgcactaacc gcaccgctcg accataaaga
     7921 caaaggtttg cagtctttga cgctggatca gtccgtcagg aaaaacgaga aactgaagct
     7981 ggcggcacaa ggtgcggaaa aaacttatgg aaacggcgac agcctcaata cgggcaaatt
     8041 gaagaacgac aaggtcagcc gcttcgactt tatccgtcaa atcgaagtgg atgggcggct
     8101 cattaccttg gagagcggag agttccaagt gtacaaacaa agccattccg ccttaaccgc
     8161 ccttcagacc gagcaagtac aagactcgga ggattccggg aagatggttg cgaaacgccg
     8221 gttcagaatc ggcgacatag cgggcgaaca tacatctttt gacaagcttc ccaaaggcgg
     8281 cagtgcgaca tatcgcggga cggcgttcgg ttcagacgat gctggcggaa aactgaccta
     8341 tactatagat ttcgccgtca aacagggaca cggcaaaatc gaacatttga aatcgcccga
     8401 actcaatgtc gagcttgcca ccgccgatat caagccggat gaaaaacacc atgccgtcat
     8461 cagcggttcc gtcctttaca accaagacga gaaaggcagt tactccctcg gtatctttgg
     8521 cgggcaagcc caggaagttg ccggcagcgc ggaagtggaa accgcaaacg gcatacacca
     8581 tatcggtctt gccgccaagc agcaaccatt gtgaaaatgc cgtccgaaca caataagtta
     8641 ccgttcggac ggcattttgt attgcaccgt ccgacggcat gtccgagggg gagatcccta
     8701 ttttcaggcc aaccgctata taatgccgtc tgaaccaacg agagaatgcc atgcaagctg
     8761 attttaaccg tcccgtcctg gccgtcgata ccggtacttc ctatttgtcg cttgcgctgc
     8821 gtgccgacgg cgaaacccgt ctgttccatc aggaagtcgg cagccgccag tccgaactga
     8881 tcctgccgga aatccgcacc ctgttccgtg atgcgggcat taccgccgcc gatttgggtg
     8941 cggtcgtgta cgcacagggt cccggcgcgt ttaccggact gcgtatcggc atcggtgtgg
     9001 cgcagggttt ggcaacgccg tttgatacgc ctttaatcgg catccccacg ctcgatgccg
     9061 ccgcctcgat gccgccgccg caaagctgca tactcgccgc tgcggacgcg cgtatgggcg
     9121 aagtgtttta tgcgtggttc gacacgctga accgccgccg tttgagcgat tatcaagtcg
     9181 gtagggcggc agacattacc ctccccgagg gacacgtctt ttcagacggc atcggcaatg
     9241 cgttcgcgct ggaaaaccgt ccgcccttct caggcaaacc cgatatgccg accgccgccg
     9301 acttcctcaa tctggcggcg gaaggcggtt ttcccgccgt cgctgcggca cacgccgagc
     9361 tgctctacgt ccgcaacaaa atcgccctga ccgccaaaga acaggcggaa cggaaagccc
     9421 gaacatgaac atccgccgcg cctcaccgtc cgactgcgcc gcactggccg cgctcgatgc
     9481 cgtctgcaac ccgtccgcgt ggacgcaacg ccaatttgag tccgcattgg tttcgccgtc
     9541 cgaacaggtt ttcctcgcgg aaaaagacgg taggttggcc gcctttatcg tttggcagaa
     9601 cctgcccgac gaatctgaac tgcacctgat tgccaccgct cctgcatacc gccgccgggg
     9661 tgtcgcgtcc gccctgctcg aatattggtt cgcacatctg cccgaaggca cgcaacgcct
     9721 gctgctcgaa gtccgcgcag gcaacaccgc cgcacaggca ctgtacacgg cgcacggctt
     9781 cagcattgcg ggcaggcgga aaaactatta ccgcgccacc gacgggcaaa ccgaagatgc
     9841 cgtcttgatg gagaaaatat gttaagcgcg cgctacctcc acctgcatga agctttgggt
     9901 ttgggcccga tgtggctgaa acaggccgcc gccgtcctgc cgcccaaaaa cacacccgca
     9961 accccggcac aggcacgtcc ccaaaccgtc cgcgccgccc cgatccgccc ttcccaaccc
    10021 cataacggtc aggcacggct cgaaacgatg aaagcgttgg aaaccgccgc cgtacctacg
    10081 cgcaaacccg cgcctgaaac cgaaacgcct ctgcccggcc tttcagacgg catcgccccc
    10141 gttcccgccg cttcgggcat caccaagctt gccgtcgtca gcctttgccc accgatcgag
    10201 gatgcggttt acgggcaact gttctacggc aaagcgggtg tcctgcttga caacatactc
    10261 aaagccgtag gactggatgc cgcctatgtc cacaaaacct gttgggtgaa aaccgccgcc
    10321 gtcggcaacc cgatgccgtc tgaacaggcc gtcgcggatg cgctgggtca aatcgcccgt
    10381 gaactcgacg gctgccgcgc cccggccgtc cttttcctcg ggcaggcttt tgtccagcct
    10441 gaacggcagg cgataattga aactttgtgc ggcagccgtc ctttcttcat catcgaccat
    10501 cccgcccggc ttttacgcca acccgaactc aaagcccgaa actggcaggt gttgaaacag
    10561 ttgaaacacg ccttgcaggc aggcggcagt tgaagcaggc cgcacggggc ggtagaatca
    10621 caactgcatc gcaatacctg acagaaagca aaaaatgacc gatttccgcc aagatttcct
    10681 taaattttcc ctcgcccaaa acgtcttaaa attcggcgaa tttaccacca aggcaggacg
    10741 gcagtcgcct tacttcttca atgccggcct ctttaacgac ggcttgtcca cgctgcaact
    10801 ggcaaaattc tatgcacaat ccatcattga aagcggcatc cgattcgata tgctgttcgg
    10861 ccccgcctac aaaggcatta ttttggcggc ggcaaccgca atgatgctgg cggaaaaagg
    10921 cgtgaacgtc ccatttgcct acaaccgcaa agaagctaaa gaccacggcg aaggcggcgt
    10981 gttggtcggt gcgccgctta aagggcgcgt gctgattatc gacgacgtga tttccgccgg
    11041 cacatccgta cgcgaatcaa tcaagctgat tgaagcggag ggtgcaaccc ccgccggcgt
    11101 cgccatcgcg ctcgaccgca tggaaaaagg caccggcgaa ttgagcgcgg ttcaggaagt
    11161 ggaaaaacaa tacggtctgc ccgtcgcccc catcgccagc ctgaacgatt tgtttatcct
    11221 gttgcaaaac aaccccgaat tcggacagtt cctcgaaccc gtccgagcct accgtcggca
    11281 gtacggcgta gaataaaaac aaagcatatg ccgtctgaac cgccttacgc ctcagacggc
    11341 atcaaacctg acacacacga ggaaatacca tgcccgcctg tttctgcccc cactgcaaaa
    11401 cccgtctctg ggtcaaagaa acccaactca atgtcgccca aggcttcgtc gtctgccaaa
    11461 aatgcgaagg actgtttaaa gccaaagacc atctggcaag cacgaaagaa cccatattca
    11521 acgatttgcc cgaggctgtt tcggatgtca aactcgttca ccgtatcggc acgcgcgcca
    11581 tcggcaagaa acagatttcc cgtgacgaaa tcgccggcat cctcaacggc ggcacaaccc
    11641 agcccgatat tccgcccgca accgccgcca cccctgctgc cgcaccgcag gttaccgtac
    11701 cacccgccgc gcccgcccgt caggaagggt tcaactggac gattgcaacc ctgtttgccc
    11761 ttatcgtcct cattatgcag ctttcctacc tcgtcatcct atgatcgtgc ccgacctctt
    11821 tgtcgcccac ttccgcgaag ccgtccccta catccgccaa atgcgcggca aaacgctggt
    11881 cgccggcata gacgaccgcc tgctcgaagg tgatacctta aacaagctcg ccgccgacat
    11941 cgggctgttg tcgcaactgg gcatcaggct cgtcctcatc cacggcgcgc gccacttcct
    12001 cgaccgccac gccgccgcgc aaggccgcac gccgcattat tgccggggct tgcgcgttac
    12061 cgacgaaacc tcgctcgaac aggcgcagca gtttgccggc accgtccgca gccgttttga
    12121 agccgcattg tgcggcagcg tttccgggtt cgcgcgcgcg ccttccgtcc cgctcgtatc
    12181 gggcaacttc ctgaccgccc gtccgatagg tgtgattgac ggaaccgata tggaatacgc
    12241 gggcgttatc cgcaaaaccg acaccgccgc cctccgtttc caactcgacg cgggcaatat
    12301 cgtctggctg ccgccgctcg gacattccta cagcggcaag accttctatc tcgatatgct
    12361 tcaaaccgcc gcctccgccg ccgtctcgct tcaggccgaa aaactcgttt acctgaccct
    12421 ttcagacggc atttcccgcc ccgacggcac gctcgccgaa accctctcgg cacaggaagc
    12481 gcaatcgctg gcggaacacg ccggcggcga aacgcgacgg ctgatttcgt ccgccgttgc
    12541 cgcgctcgaa ggcggcgtgc atcgcgtcca aatcctcaac ggtgcctccg acggcagcct
    12601 gctgcaagaa ctcttcactc gcaacggcat cggcacgtcc attgccaaag aagccttcgt
    12661 ctccatccgg caggcgcaca gcggcgacat cccgcacatt gccgccctca tccgcccgct
    12721 ggaagaacag ggcatcctgc tgcaccgcag ccgcgaatac ctcgaaaacc acatttccga
    12781 attttccatc ctcgaacacg acggcaacct gtacggttgc gccgccctaa aaacctttac
    12841 cgaagccgat tgcggcgaaa tcgcctgcct tgccgtctcg ccgcaggcac aggacggcgg
    12901 ctacggcgaa cgcctgcttg cccacattat cgataaggcg cgcggcatag gcataagcag
    12961 gctgttcgca ctgtccacaa ataccggcga atggtttgcc gaacgcggct ttcagacggc
    13021 atcggaagac gagttgcccg aaacgcggcg caaagactac cgcagcaacg gacggaactc
    13081 gcatattctg gtgcgtcgcc tgcaccgctg accgcaacgg aaagccgccg cagaaatgcc
    13141 gtctgaaccc cgtttcagac ggcatttccc cga
//
LOCUS       DAWGKF010000049        12712 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.049, whole genome shotgun sequence.
ACCESSION   DAWGKF010000049 DAWGKF010000000
VERSION     DAWGKF010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12712)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12712)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12712
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.049"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..1722
                     /locus_tag="WHR07_000953"
     CDS             <1..1722
                     /locus_tag="WHR07_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEZ2130182.1"
                     /translation="LYTKLTRKRQEIFFNQTLAFDEIDRLFDAKAFSKFSRHTADGKQ
                     AVGEIKRHSDGTPAENLIIKGNNLIALHSLATQFKGKVKLIYIDPPYYFVKKKQQDSF
                     GYNTNFKLSTWLTFMKNRLSIAKELLTDDGIIVISIDDDGNAYLKILLDEIFGFENFI
                     GNLPTIMNLKGNNDEYAFAGTHEYTLVFAKNKDKSTFYEFPIDEDNFLEKWEEDEIGF
                     YKKGAPMRATGTEDKREDRPEMFYPFLVKNNTVSTITDEEFSQIYNKDLEVFNDDFIQ
                     KLKEKYENLGYNFILPIADKQWGRWRWGYSIKNKARLQTDIIVSQSKNGISLYKKQRP
                     ELDDLPTKKPKTIFYKPEYSSGNGTEQMKNLFGEKAFKNPKPEELIQDFITITTNESD
                     IVLDYHLGSGTTAAVAHKMNRQYIGIEQMDYIETLAVERLKKVIDGEQGGISKAVNWQ
                     GGGEFVYAELAPFNETAKQQILACEDSDGIKTLFEGLCERYFLKYNVSVNEFSQIIQE
                     PEFQSLALDEQKQMVLEMLDLNQMYVSLSEMDDEQFAGCLNDDDKALSREFYQSAKNQ
                     AEKKDGE"
     gene            1712..4486
                     /locus_tag="WHR07_000954"
     CDS             1712..4486
                     /locus_tag="WHR07_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEZ2130183.1"
                     /translation="MANNKTLFDWVEDRKSTLEEIEQTDFFALPEFVERNLKYPFFEW
                     QKSALENFVIFDRASKLKDFPDIKNRPTHLLFNMATGAGKTMMMAALILYYFEKGYRH
                     FLFFVNQNNIVDKTENNFIDPAHAKFLFTEKILQGDTVIPIRKVEMFSPHSDGIEIKF
                     TSIQKLYNDIHTERENQTTLADLHKLNLVMLGDEAHHLNAQTKGKKQDELDLEVELKA
                     NAGNAEIERKGWEHMVLELLLNKNGNPGQNVLLEFTATLPENADVQQKYADKIITKFG
                     LKEFLQKGYTKEINLVSSTLNKKERVLHALLFAWYRHQIALKYGIANFKPVMLFRSKT
                     IDESKADYSAFLNWAENVQADDFEFLDTFSGSLNNSDNANEQGKTRTEQALKFMQENG
                     FEFAHLANWVKQNYQKHNVIITNSETNKNKTEKTDSETEKLLNNLEAADNPIRAIFTV
                     DRLTEGWDVLNLFDIVRLYEGQNGGGSNKKSGKTAAATVSEKQLIGRGVRYFPFAFEG
                     KQPNKRKFDNDMQHELRILEELFYYTHDEQSRYISELKNELRKDGYLPEKDDDKVLAT
                     FKLKSEFADNKDFRELLIWANKKIPNPNAKSNNADSLQANPQTLSFQIHGNQLLQETQ
                     FTADENDETARQIGTQNNFTQTIKMSEMERHIFNKALHIKGKNSQSLFHFDRLQSKLN
                     IQNRNELQNNLLKDWQIEFLGLGQDKQVRPDDKLAGCLKILEMVEKHLNESDMPFIGT
                     KEFTPKKLWEIFGTPKQKWVKKDDVKTTIATQNDWYVMDNFAGTGLEEALIQFISARL
                     GDLKSKYDVHLIRNEEVFKLNNFADGEGFMPDFILLLKDKQKSSSNGVNDFLHYQIFI
                     EPKGEHLVETDGWKEEFLEAITVEYGMDKILQKDTPHYRLIGLPFFTDHQKNGQFTES
                     FPLGAASLEK"
     gene            complement(4635..5807)
                     /locus_tag="WHR07_000955"
     CDS             complement(4635..5807)
                     /locus_tag="WHR07_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /protein_id="HEZ2130184.1"
                     /translation="MKRDLSKMTCIEDLRRVAKRKMPRMFYDYIDSGSWTETTYRENT
                     SDFKDIRFRQKVLVNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGEILAARAAE
                     KFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKDAKCSALVLT
                     ADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKPEWCMKMLNTERRTFRNIVGHAKN
                     VGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGIMEPEDAEKAAKSGADALI
                     VSNHGGRQLDDTVSAIKALPDIVSAVGSDIEVWMDSGIRSGQDILKAWALGAKGTMIG
                     RAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGHRDIQDVDASILRGKDWGRETV"
     gene            6097..6543
                     /gene="iscR"
                     /locus_tag="WHR07_000956"
     CDS             6097..6543
                     /gene="iscR"
                     /locus_tag="WHR07_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HEZ2130185.1"
                     /translation="MRLTTKGRFAVTAMLDLAMNAQTGAVKLSAISERQNISLSYLEQ
                     LFGKLRRAGLVESLRGPGGGYILAAPAARINIAQIIAAAEDRLDATQCGSKANCHHGA
                     PCLTHDLWENLNKTINDYLGSVTLQSIIEQKNNGDGSRVVQFTHIH"
     gene            6572..7786
                     /locus_tag="WHR07_000957"
     CDS             6572..7786
                     /locus_tag="WHR07_000957"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HEZ2130186.1"
                     /translation="MTVKTPVYLDYAATTPVDKRVAEKMIPYLTETFGNPASNSHAFG
                     WEAEEAVEKARADIAALINADPKEIVFTSGATESDNLAIKGAANFYKTKGKHLITVKT
                     EHKAVLDTMRELERQGFEVTYLGVQENGLIDLEELKAAIRDDTILISVMWANNEIGVV
                     QDIPAIGEICRERKIVFHVDAAQACGKVPVDVEAAKIDLLSMSAHKVYGPKGIGALYV
                     RRKPRVRLEAQMHGGGHERGFRSGTLPTHQIVGMGEAFRIAKEELEQDMAHYRKLRDI
                     FLKGIEGIEEVYINGDLEHRAPNNLNVSFNFVEGESLIMAVKELAVSSGSACTSASLE
                     PSYVLRALGRNDELAHSSLRITFGRMTTEEEVQFAAELIKSKIGKLRELSPLWEMFKD
                     GIDLNSIEWAAH"
     gene            8047..8433
                     /gene="iscU"
                     /locus_tag="WHR07_000958"
     CDS             8047..8433
                     /gene="iscU"
                     /locus_tag="WHR07_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HEZ2130187.1"
                     /translation="MAYSDKVIDHYENPRNVGTFDKNDESVGTGMVGAPACGDVMRLQ
                     IKVNDEGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLDDALAIKNSEIAEELELPPV
                     KIHCSILAEDAVKAAVADYRKRQENR"
     gene            8520..8840
                     /gene="iscA"
                     /locus_tag="WHR07_000959"
     CDS             8520..8840
                     /gene="iscA"
                     /locus_tag="WHR07_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HEZ2130188.1"
                     /translation="MITLTENAAKHINDYLAKRGKGLGVRLGVKTSGCSGMAYNLEFV
                     DEADGDDLIFEGHGARIYIDPKSLVYLDGTQVDYTKEGLQEGFKFENPNVKDSCGCGE
                     SFHV"
     gene            complement(8800..9021)
                     /locus_tag="WHR07_000960"
     CDS             complement(8800..9021)
                     /locus_tag="WHR07_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome-rescue factor A"
                     /protein_id="HEZ2130189.1"
                     /translation="MGGKVQHNKGKIRDNALKALVKSDLFRHKVERKRKGKGSYNRQE
                     AKKWRDGFDTVPPFLCLKRGSFRRSRRSL"
     gene            9103..9603
                     /gene="hscB"
                     /locus_tag="WHR07_000961"
     CDS             9103..9603
                     /gene="hscB"
                     /locus_tag="WHR07_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly co-chaperone HscB"
                     /protein_id="HEZ2130190.1"
                     /translation="MSQYFTLFRIEPAFDIDTENLEQTYRALAARFHPDKFASASAFE
                     QKQAVMMSSTINDAYRTLKNPIDRAAYLLKTSGIDADAPEHTAFAPEFLMQQMEWRET
                     LMEARAGNDLESLKNLDNEIRDEQEKLFCGLKQSFARQDYDTAAQQVRQGRFLDKLRN
                     EISSAL"
     gene            9701..12451
                     /gene="gyrA"
                     /locus_tag="WHR07_000962"
     CDS             9701..12451
                     /gene="gyrA"
                     /locus_tag="WHR07_000962"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEZ2130191.1"
                     /translation="MTDATIRHDHKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPD
                     VRDGLKPVHRRVLYAMHELKNNWNAAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQ
                     NFAMRYVLIDGQGNFGSVDGLAAAAMRYTEIRMAKISHEMLADIEEETVNFGPNYDGS
                     EHEPLVLPTRFPTLLVNGSSGIAVGMATNIPPHNLSDTVNACLRLLDAPDTEIDELID
                     IIQAPDFPTGATIYGLSGVREGYKTGRGRVVMRGKTHIEPIGRNGEREAIVIDEIPYQ
                     VNKAKLVEKIGDLVREKTLEGISELRDESDKSGMRVVIELKRNENAEVVLNQLYKLTP
                     LQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRREVVTRRTLFRLKKARHEGHIAEGK
                     AVALSNIDEIIKLIKESPNAAEAKDKLLAHPWRSSLVEEMLTRSGLDLEMMRPEGLAA
                     NIGLKEQGYYLSEIQADAILRMSLRNLTGLDQEEIVESYKNLMGKIIDFVDILSKPER
                     ITQIIRDELEEIKTNYGDERRSEINPFGGDIADEDLIPQREMVVTLTHGGYIKTQPTT
                     DYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFTNLGKCHWIKVYKLPEGGRN
                     SRGRPINNVIQLEEGEKVSAILAVREFPEDQYVFFATAQGMVKKVQLSAFKNVRAQGI
                     KAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNEYWEKSGNDEAEDADIETEISD
                     GIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADGKIVSLITFAPETEESGLQV
                     LTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVGETDDLMLITSGG
                     VLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEDESELSDASVISNVTEPEV
                     EN"
     gene            12608..12712
                     /locus_tag="WHR07_000963"
                     /pseudo
     CDS             12608..12712
                     /locus_tag="WHR07_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249760.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT         3856 a         3151 c         2808 g         2897 t
ORIGIN      
        1 ttatacacta aattaacccg aaaaagacaa gaaatctttt ttaatcaaac gcttgctttt
       61 gatgaaattg accggctttt tgacgcaaaa gcattctcaa aattctctcg ccacaccgca
      121 gacggcaaac aagcggttgg cgaaatcaaa cgacattcag acggcacacc agccgaaaat
      181 ctcattatca aaggcaataa tctgattgcc ctgcattcgc ttgccacgca gtttaaaggt
      241 aaagtgaagc tgatttatat tgatccgcct tattattttg ttaaaaagaa acaacaagat
      301 agttttggtt ataacactaa ctttaaatta tctacttggc ttacatttat gaaaaatcgt
      361 ttatcaattg ccaaagaatt attaactgat gatgggatta ttgttatttc cattgatgat
      421 gacggaaatg cttatttaaa gattttgtta gatgaaattt ttggatttga aaattttatc
      481 ggaaatttac ccactattat gaatttaaaa ggtaataatg atgaatatgc ttttgcaggc
      541 actcacgaat acacactagt ctttgctaaa aataaagata aatctacttt ttatgaattt
      601 ccaatagatg aagataattt tttagagaaa tgggaagaag atgaaattgg gttttataaa
      661 aaaggagctc caatgcgagc aacaggaacc gaagataaaa gagaagatag acctgaaatg
      721 ttctatcctt ttttggtaaa aaataacaca gttagtacaa ttacagatga agaattttct
      781 caaatctata ataaagattt agaagtattc aatgatgatt ttattcaaaa actaaaagag
      841 aaatacgaaa atcttggata caattttatt ttacctattg ctgataaaca atgggggcgt
      901 tggcgttggg ggtattcaat aaagaataag gcaaggctgc agacggatat tattgttagc
      961 caatctaaaa atggaatttc cttgtataaa aaacaaagac ctgaattaga tgatttacct
     1021 acaaaaaaac ctaaaactat tttttataaa cctgaataca gtagtggtaa tggaactgaa
     1081 cagatgaaaa atctttttgg tgaaaaggca tttaaaaatc ctaaaccaga agaacttatc
     1141 caagatttta ttaccatcac aaccaacgaa tccgacatcg tcttagacta ccatcttggt
     1201 agtggcacaa ccgccgccgt tgcccacaaa atgaaccgac aatatatcgg tattgaacaa
     1261 atggattata ttgaaacgct tgccgttgaa cgcttgaaaa aagtgattga tggcgagcaa
     1321 ggcggtattt ccaaagccgt gaattggcaa ggtggtggcg agtttgttta tgccgaactt
     1381 gccccattta acgaaaccgc aaaacaacaa attttggctt gcgaagattc agacggcatc
     1441 aaaacgctgt ttgaaggttt atgcgaacgc tatttcttga aatacaacgt cagcgtaaat
     1501 gaatttagtc aaatcattca agagcctgaa tttcaatcct tggcattaga cgaacaaaaa
     1561 caaatggtgc ttgaaatgtt ggatttaaat caaatgtatg tttcattatc cgaaatggat
     1621 gatgagcaat ttgcaggttg cttaaatgat gacgataaag cgttaagccg tgaattctat
     1681 caatcagcaa aaaatcaagc ggagaaaaaa gatggcgaat aataaaacgt tatttgattg
     1741 ggtggaagac cgcaaatcaa cgctggaaga aatagaacag acagattttt tcgcgctgcc
     1801 tgaatttgta gaacgcaatt taaaatatcc gttttttgaa tggcaaaaat cggctttaga
     1861 aaactttgtg atttttgacc gcgcttcaaa attaaaggat ttccctgaca tcaaaaaccg
     1921 ccctacccat ttgctgttca atatggcaac aggtgctggc aaaacgatga tgatggcggc
     1981 gttgattttg tattattttg aaaaaggtta tcggcatttt ttgtttttcg tcaatcaaaa
     2041 taatatcgtg gataaaacgg aaaataattt tattgacccg gcgcacgcaa aatttttatt
     2101 taccgagaag attttgcaag gtgatacggt aattcctatt cgcaaagtgg aaatgttcag
     2161 cccacattca gacggcattg aaattaaatt taccagcatt caaaaactgt ataacgatat
     2221 ccacaccgag cgagaaaacc aaaccacatt ggcagatttg cacaaattga accttgtgat
     2281 gctgggcgat gaagcacacc atttaaacgc acaaaccaaa ggcaaaaaac aagacgagtt
     2341 ggatttggaa gtggaattaa aagccaatgc aggcaatgcc gaaattgaac gcaaaggctg
     2401 ggagcatatg gttttggaat tgttgctcaa taaaaatggc aatcccggcc aaaatgtgct
     2461 gttggaattt accgccacgc tgcctgaaaa tgctgacgtg caacaaaaat atgcggacaa
     2521 aatcatcaca aaatttggct taaaagagtt tttgcaaaaa ggttatacca aagaaatcaa
     2581 tttggtatcc agtacgctga ataagaaaga gcgggtgttg cacgctttat tatttgcttg
     2641 gtatcgccat caaatcgcgt tgaaatacgg cattgccaat ttcaagcctg tgatgttgtt
     2701 tagaagtaag acgattgatg aatcaaaagc ggattattcg gcatttttaa attgggcaga
     2761 aaatgtacaa gcggatgatt ttgagttttt agatacgttt tcaggcagcc tgaataatag
     2821 cgacaacgcc aacgaacaag gcaaaacccg aaccgaacaa gccctaaaat ttatgcagga
     2881 aaatggcttt gagtttgcac atttggcaaa ttgggtgaaa caaaattatc aaaaacataa
     2941 tgtgattatt accaactccg aaaccaacaa aaacaaaact gaaaaaaccg acagcgaaac
     3001 cgaaaaattg ctaaacaatt tggaagcggc tgataatcca atccgtgcca tttttacggt
     3061 agatagatta accgaaggtt gggacgttct gaatttgttt gatattgtgc gtttgtatga
     3121 agggcaaaat ggcggtggtt caaataaaaa atcaggcaaa acggctgccg ctaccgtatc
     3181 ggaaaagcag ttgattggtc gtggcgtgcg ttattttcca tttgcgtttg aaggtaaaca
     3241 gccgaataaa cgcaaatttg acaacgacat gcaacacgaa ttgcgtatct tggaagaatt
     3301 gttttattac acgcacgatg agcaatcccg ctatatttca gaactgaaaa atgagttgcg
     3361 aaaagacggt tatttgcctg aaaaagacga tgataaggtg ttggcaacat ttaaactcaa
     3421 atctgaattt gccgataata aggattttag agagttgtta atttgggcga ataaaaaaat
     3481 ccccaaccca aacgccaaaa gcaataatgc agacagcctg caagccaatc cgcaaacgct
     3541 ttcattccaa attcacggca atcaattgtt gcaggaaacg caatttacag ccgatgaaaa
     3601 tgatgaaaca gcccgacaaa tcggcacaca aaataatttt actcaaacca taaaaatgag
     3661 tgaaatggag cggcacattt tcaataaagc attacatatc aaagggaaaa atagtcaatc
     3721 tttattccat tttgaccgcc tgcaaagcaa actcaacatt caaaatcgca atgaattgca
     3781 aaataacttg ttgaaagact ggcaaattga atttttagga ttagggcaag acaaacaggt
     3841 tcgcccggat gataaacttg caggctgcct gaaaatcttg gaaatggttg aaaaacatct
     3901 gaatgaaagt gatatgccgt ttatcggtac aaaagaattt acacctaaaa aattatggga
     3961 aattttcggc acgccaaaac aaaaatgggt caaaaaagat gatgtaaaaa cgactattgc
     4021 cacgcaaaat gattggtatg tgatggataa ttttgctgga acgggtttgg aagaagcgtt
     4081 aattcaattt atttcagcgc gtttgggcga tttgaaatct aaatatgacg ttcatttaat
     4141 ccgtaatgaa gaagtgttta aattgaataa ctttgccgat ggtgaaggat ttatgccgga
     4201 ctttatttta ttgctgaaag ataaacaaaa atcttcttcc aatggtgtga acgacttttt
     4261 gcattaccaa attttcattg agcccaaagg tgagcattta gtggaaactg atggatggaa
     4321 agaagaattt ttagaagcca tcactgtgga atatgggatg gataagatcc tgcaaaaaga
     4381 tacaccgcat tatcgtttga tcggtttacc gttttttact gatcatcaga aaaatggaca
     4441 atttacggag tcattccctt taggtgcggc atcgcttgaa aaatagagta gtgcattgca
     4501 ggcaaccccg tttgacaaaa cttcctttac aaaagggcgt tttgtcagat atttaatcaa
     4561 cacattatta aaatacagcc aaattttaat gccgtccgaa ccctgtgttc agacggcatc
     4621 gtatttttca gtatctaaac cgtttcccta ccccaatctt taccccttaa aatcgaggca
     4681 tcgacatctt gaatatcgcg gtgtcccgta aacgccatag atatatccat ttctttatat
     4741 agaatttcca gcgcacgggt tacgccttct tcgccatacg cgcccaagcc atacaggaac
     4801 gcccgaccta tcattgtacc tttcgcgccc aaagcccacg ccttcaaaat atcctgaccg
     4861 ctgcggatgc cgctgtccat ccaaacttcg atgtcgctgc ccactgcact gacgatgtcg
     4921 ggcaaggctt tgatggcaga cacggtatcg tcgagctgtc ggccgccgtg gttggaaaca
     4981 atcaatgcgt ccgcgccgct tttcgctgct ttttccgcgt cttcgggttc cataatgcct
     5041 ttgataatca gcttgccgcc ccacaaatct ttaatgcgcg ccacatcgtc ccagctcagg
     5101 cgcgggtcga attgttcgga agtccatgaa gacagcgaag acaaatcgcc gacgttcttc
     5161 gcgtgtccga cgatattgcg gaacgtgcgg cgttccgtgt tcagcatttt catgcaccat
     5221 tccggtttgg tcgccagatt gattaaattg gcgatggtcg gtttcggcgg cgcggacagg
     5281 ccgtttttga tgtctttgtg gcgttgaccc aaaacctgca aatcggcggt caataccaat
     5341 gccgaacatt tggcatcctt cgcgcgctta atcaggtttt ccataaactc gcggtcgcgc
     5401 atcacataaa gctgaaacca aaacggcgca ctggtgttct cggcaacgtc ttcaatcgag
     5461 cagatggaca tggtggacaa cgtaaacgga ataccgaact tctccgccgc ccgcgccgcc
     5521 aaaatttcgc cgtctgcgtg tgccatgccg gtaaaacccg tcggcgcaat cgccaccggc
     5581 attttcacat cctgcccgat cattttagtc tcaaggctgc gtccctccat attgaccaat
     5641 actttttgac ggaagcggat gtctttgaaa tccgaagtat tttcccgata agtcgtttcc
     5701 gtccacgaac ccgaatcgat gtaatcgtaa aacatacgcg gcattttgcg cttggcaacg
     5761 cggcgcaagt cttcgatgca ggtcattttg ctcaaatcac gtttcatttg tcgccccctg
     5821 aatacctgaa taactttata tgaaatagat aatgtatatc aatattgatt ataaggcaaa
     5881 tcatttcaac atttactgca cccgccgccg ctcccacttc aagcggcata aggtttagaa
     5941 ttcaaaaata atatattaaa atcaaaatat taaaaatcaa tcaatctgcc gatttaaaca
     6001 gccaatcgcg caatccgccc ccatacttga ctgaaacact cagatattgg acaattccgc
     6061 ccactataaa aaaagccgac acgggcaacc accaccatga gactgaccac caaagggcgt
     6121 ttcgccgtta ccgctatgct ggatttggcg atgaacgcgc aaaccggcgc cgtcaaactc
     6181 agtgccatca gcgaacgcca aaacatatcc ctctcctatc tcgagcaatt gttcggcaaa
     6241 ctccgccgcg ccggacttgt tgaaagcctg cgcgggcccg gcggcggcta catcctcgcc
     6301 gcaccggcgg cacgcatcaa catcgcccaa atcatcgccg ccgccgaaga ccggctggac
     6361 gcgacccaat gcggcagcaa agccaactgc caccacggcg cgccctgcct gacgcacgac
     6421 ctttgggaga atttaaacaa aaccatcaac gactacctcg gcagcgttac cctgcaaagc
     6481 atcatcgaac agaaaaacaa cggcgacggc agccgcgtcg tccaatttac acacatccat
     6541 taaataacac ccgaaaaaga aagggcaaac catgaccgtc aaaacccccg tttacctcga
     6601 ctacgccgcc accacccccg ttgacaaacg cgttgccgaa aaaatgattc cctatctgac
     6661 cgaaaccttc ggcaaccccg cctccaacag ccacgcattc ggctgggaag cagaagaggc
     6721 cgtcgaaaaa gcccgcgccg acatcgctgc cctgattaat gccgacccca aagaaatcgt
     6781 cttcaccagc ggcgcgaccg agtccgacaa cctcgccatc aaaggcgcgg caaacttcta
     6841 caaaaccaaa ggcaaacacc tcatcaccgt caaaaccgaa cacaaagccg ttttagatac
     6901 aatgcgcgaa ctcgaacgcc aaggttttga agtaacctac ctcggcgttc aagaaaacgg
     6961 tttgattgat ttggaagaac tcaaagccgc catccgcgac gacaccatcc tgatttccgt
     7021 aatgtgggca aacaacgaaa tcggcgtggt gcaagacatt cccgccatcg gcgaaatctg
     7081 ccgcgaacgt aaaatcgtct tccacgtcga tgccgcccaa gcctgcggca aagtgcctgt
     7141 cgatgtcgaa gccgccaaaa tcgacctgct ctcgatgtcc gcgcacaaag tgtacggccc
     7201 caaaggcatc ggcgcgctgt acgtccgccg caaaccgcgc gtccgcctcg aagcccaaat
     7261 gcacggtggc ggccacgaac gcggcttccg cagcggcaca ttaccgaccc accaaatcgt
     7321 cggtatgggc gaagccttcc gcatcgccaa agaagaactc gaacaagata tggcgcacta
     7381 ccgcaaactg cgcgacatct tcctcaaagg catcgaaggc atcgaagaag tctatatcaa
     7441 cggcgacctc gaacaccgcg ccccgaacaa cctgaacgtc agcttcaact tcgtcgaagg
     7501 cgaaagcctg attatggcag tgaaagaact cgccgtatcc agcggctccg cctgcacctc
     7561 cgcctcgctc gaacccagct acgtcctgcg cgcattgggc agaaatgacg aattggcgca
     7621 ctcgtccctg cgcatcacct tcggtcgcat gaccactgaa gaagaagtgc aatttgccgc
     7681 cgaactgatt aaatccaaaa tcggcaaact gcgcgaactg tcgccgttgt gggaaatgtt
     7741 caaagacggg attgatttga actcgattga atgggcggcg cattaaagcg taccaacatg
     7801 ccatccgaac cttcagacgg cattccaaaa acaaagcaat caagagaaaa atatgaacga
     7861 acaagattta gatttggaca acctcgacaa cctgcttgac gatttcgacg gcgttaccgt
     7921 ggaaggcggc gtcgattcgg aaaacgacga cggctgtgaa ggcggagcgt gcaaaatcta
     7981 actcaggccg tctgaaaacc ggcaaacaaa ccacttaaat catcaaaaca ttaaggaaac
     8041 cacatcatgg catacagcga taaagtaatc gaccactacg aaaatccccg caacgtcggt
     8101 actttcgaca aaaacgacga atctgtcggc accggcatgg tcggcgcacc ggcctgcggc
     8161 gacgtgatgc gcctgcaaat caaagtgaac gatgaaggca tcatcgaaga tgcgaaattc
     8221 aaaacttacg gctgcggttc cgccatcgct tcgtccagcc tgattaccga gtgggtcaaa
     8281 ggcaaaagtc tggatgacgc gctggcaatc aaaaacagcg aaatcgccga agagttggaa
     8341 ttgccgccgg taaaaatcca ctgctccatc ttggctgaag atgcggtaaa agcggccgtt
     8401 gccgactacc gcaaacgtca ggaaaacaga taaagccttt cagacggcat cgtcccgcaa
     8461 tgccgtccga accacccgcc gcttcaggtc cgtccggggc ggtacaacaa ggaagaaata
     8521 tgattaccct taccgagaat gccgcaaaac acatcaatga ctatctcgcc aaacgcggca
     8581 aaggcttggg cgtacgcttg ggtgtgaaaa ccagcggctg ctcggggatg gcgtacaacc
     8641 ttgaatttgt cgatgaagcc gatggcgacg acctgatttt cgaaggacac ggcgcgcgca
     8701 tttatatcga tccgaaaagc ctggtttatc tggacggcac gcaagtcgat tacaccaaag
     8761 aaggtttgca ggaaggtttc aaatttgaaa accccaatgt caaagactcc tgcggctgcg
     8821 gcgaaagctt ccacgtttaa ggcataaaaa cggcgggaca gtatcaaaac cgtcccgcca
     8881 ttttttcgct tcctgcctgt tgtagctgcc tttgcctttc cttttccgtt ccaccttgtg
     8941 ccggaacaaa tcggatttca ctaaggcttt taaagcattg tcgcgtattt tgcctttatt
     9001 gtgctgcact ttgccgccca tattcagtcc tttcgtttaa gaagctgcag attataaggc
     9061 aaaaacagtt ttctgccaaa atcttacatt tatcattcta ctatgtccca atatttcacc
     9121 ctcttccgga ttgaacccgc tttcgatatc gacaccgaaa acttggaaca aacctaccgc
     9181 gccttggccg cccgtttcca tcccgataaa ttcgcttcag cttccgcctt tgagcaaaag
     9241 caggcagtga tgatgtcttc caccatcaac gatgcctacc gcaccttgaa aaaccccatc
     9301 gaccgcgccg cctacctgct gaaaacatcg ggcatcgatg ccgacgcgcc ggagcatacc
     9361 gctttcgccc ccgaattcct tatgcagcaa atggaatggc gcgaaacgct gatggaggca
     9421 cgggcaggca acgaccttga atccttgaaa aatctcgaca acgaaatccg cgacgaacaa
     9481 gaaaaactgt tctgcggtct gaaacagtcg tttgcccgac aagattacga cacagccgca
     9541 caacaagtcc gccaaggcag gtttctcgac aaactccgca acgaaatttc ctcggcatta
     9601 taatccgcac cgtgtttcag acggcgtaac cgccgcaccg ttccgcgtca aaatatgcta
     9661 aaataagcaa caattttttg ccatacgaaa cattgaaacc atgaccgacg caaccatccg
     9721 ccacgaccac aaattcgccc tcgaaaccct gccggtaagc cttgaagacg aaatgcgcaa
     9781 aagctatctc gactacgcca tgagcgtcat tgtcgggcgc gcgctgccgg acgttcgcga
     9841 cggtctcaag ccggtacacc gccgcgtact gtacgcgatg cacgaattga aaaacaactg
     9901 gaatgccgcc tacaaaaaat cggcgcgcat tgtcggcgac gtcatcggta aataccaccc
     9961 ccacggcgat accgccgtat acgacaccat cgtccgtatg gcgcaaaatt tcgctatgcg
    10021 ttatgtgctg atagacggac agggcaactt cggatcggtg gacgggcttg ccgccgcagc
    10081 catgcgctac accgaaatcc gcatggcgaa aatttcccac gaaatgctgg cagacattga
    10141 ggaagaaacc gtcaatttcg gcccgaacta cgacggtagc gaacacgagc cgcttgtact
    10201 gccgacccgt ttccccacac tgctcgtcaa cggctcgtcc ggcatcgccg tcggcatggc
    10261 gaccaatatc ccgccgcaca acctttccga taccgtcaat gcctgcctgc gcctgctcga
    10321 tgcacccgac accgaaatcg acgaactgat cgacattatc caagcccccg acttcccgac
    10381 cggggcaacc atctacggct tgagcggcgt gcgcgaaggc tataaaacag gccgcggccg
    10441 cgtcgttatg cgcggtaaga cccatatcga acccataggc agaaacggcg aacgcgaagc
    10501 catcgttatc gacgaaatcc cctatcaggt caacaaagcc aagctggtcg agaaaatcgg
    10561 cgatttggtt cgggaaaaaa cactggaagg catttccgag ctccgcgacg aatccgacaa
    10621 atccggtatg cgcgtcgtta tcgagctgaa acgcaacgaa aatgccgaag tcgtcttaaa
    10681 ccaactctac aaactgactc cgctgcaaga cagtttcggc atcaatatgg tggttttggt
    10741 cgacggacaa ccgcgcctgt tgaacctgaa acagattctc tccgaattcc tgcgccaccg
    10801 ccgcgaagtc gttacccgac gtacgctttt ccggctgaag aaggcacgcc atgaagggca
    10861 tattgccgaa ggcaaagcgg tcgcactgtc caatatcgat gaaatcatca agctcatcaa
    10921 agaatcgccc aacgcagccg aggccaaaga caaactgctt gcgcaccctt ggcgcagcag
    10981 cctcgttgaa gaaatgctga cgcgttccgg tctggatttg gaaatgatgc gtccggaagg
    11041 attggctgca aacatcggct tgaaagagca aggttattac ctgagcgaga ttcaggcaga
    11101 tgctatttta cgcatgagcc tgcgaaacct gaccggcctc gatcaagaag aaattgtcga
    11161 aagctacaaa aacctgatgg gtaaaatcat cgactttgtg gatatcctct ccaaacccga
    11221 acgcattacc caaatcatcc gcgacgaact ggaagaaatc aaaaccaact atggcgacga
    11281 acgccgcagc gaaatcaacc cgttcggtgg cgacattgcc gatgaagacc tgattccgca
    11341 acgcgaaatg gtcgttaccc tgacacatgg cggctatatc aaaacccagc cgaccaccga
    11401 ctatcaggcg cagcgtcgcg gcgggcgcgg caaacaggcg gctgccacca aagacgaaga
    11461 ctttatcgaa accctgtttg ttgccaacac gcatgattat ttgatgtgct ttaccaattt
    11521 gggcaagtgt cattggatta aggtttacaa actgcccgaa ggcggacgca acagccgcgg
    11581 ccgtccgatt aacaacgtca tccagttgga agaaggcgaa aaagtcagcg cgattctggc
    11641 agtacgcgag ttccccgaag accaatacgt cttcttcgcc accgcgcagg gaatggtgaa
    11701 aaaagtccaa ctttccgcct ttaaaaacgt ccgcgcccaa ggcattaaag ccatcgcgct
    11761 caaagaaggc gactacctcg tcggcgctgc gcaaacaggc ggtgcggacg acatcatgct
    11821 gttctccaac ttaggtaaag ccatccgctt caacgaatac tgggaaaaat ccggcaacga
    11881 cgaagcggaa gatgccgaca tcgaaaccga aatttcagac ggcatcgaag atgaaaccgc
    11941 cgacagcgaa aacgcactgc cgagcggcaa acacggtgtt cgcccgtccg gtcgcggcag
    12001 cggcggtttg cgcggtatgc gcctgcctgc cgacggcaaa atcgtcagcc tgattacctt
    12061 cgcccctgaa accgaagaaa gcggtttgca agttttaacc gccaccgcca acggatacgg
    12121 aaaacgcacc ccgattgccg attacagccg caaaaacaaa ggcgggcaag gcaatattgc
    12181 cattaacacc ggcgagcgaa acggcgattt ggtcgccgca accttggtcg gcgaaaccga
    12241 cgatttgatg ctgattacca gcggcggcgt acttatccgc accaaagtcg aacaaatccg
    12301 cgaaaccggc cgcgccgcag caggcgtgaa actgattaac ttggacgaag gcgaaacctt
    12361 ggtatcgctg gaacgtgttg ccgaagacga atccgaactc tccgacgctt ctgtaatttc
    12421 caatgtaacc gaaccggaag tcgagaactg aaaatcatct cccgatgccg tctgaagatt
    12481 cagacggcat ttattttatc cctcatccgt catccagctt ctcacaatat agcggattat
    12541 agtcaattaa aaacaagggg ctgtcctaga taactaggga aattcaaatt aagttagagt
    12601 tgcccctatg agaaaaagtc gtctaagccg gtataaacaa ataaactcat tgaactgttt
    12661 gtcgcaggtg taactgcaag aacgacagca gagttagtag gcgttaataa aa
//
LOCUS       DAWGKF010000050        12676 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.050, whole genome shotgun sequence.
ACCESSION   DAWGKF010000050 DAWGKF010000000
VERSION     DAWGKF010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12676)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12676)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12676
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.050"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(215..1066)
                     /locus_tag="WHR07_000964"
     CDS             complement(215..1066)
                     /locus_tag="WHR07_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-54 factor"
                     /protein_id="HEZ2130192.1"
                     /translation="MTLLGIKLKQTQQLNQRLQQSLRVLQMSGIELEREVENWLSDNP
                     LLERKDTDEFSDAEFSHYTAPARQIGGDEGEDMLSNIAGEQDFKQYLHAQVCEHPLSD
                     QESACVHILIDFLDEQGYLTDSIEDILDHTPLEWMLDEAMLKQALTALQKFDPAGVAA
                     ADLNESLILQIERSGECAAKPAALHIVRNALDSIDGNRSQTLARIKKHLPQTDSGTLE
                     AALDLIASLNPFPAAGFASSTPTPYSDEALANLLAFRGMEVSRRTIAKYRESLEIPAA
                     HKRKTAE"
     gene            1415..2929
                     /gene="katA"
                     /locus_tag="WHR07_000965"
     CDS             1415..2929
                     /gene="katA"
                     /locus_tag="WHR07_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase KatA"
                     /protein_id="HEZ2130193.1"
                     /translation="MTTSKCPVTHLTMNNGAPVADNQNSLTAGPRGPLLAQDLWLNEK
                     LADFVREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFTTVAG
                     ERGAADAERDIRGFALKFYTEEGNWDVVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNM
                     RSATNNWDFWTLLPEALHQVTIVMSDRGIPAGYRHMHGFGSHTYSFWNEAGERFWVKF
                     HFRTQQGIKNLTNEEAAKIIADDRESHQRDLYEAIERGEFPKWTMYIQVMPEADAEKV
                     PYHPFDLTKVWPKKDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGIGASPDKM
                     LQARLFNYADAQRYRLGVNFRQIPVNRPRCPVHSNQRDGQGRADGNYGSLPHYEPNSF
                     GQWQQQPDFAEPPLKINGDAAHWDYRQDDDDYFSQPRALFNLMNDAQKQALFGNTAAA
                     MGDAPDFIKYRHIRNCYRCDPAYGEGVAKALGLTVEDAQAARATDPALGQPGLL"
     gene            3253..3465
                     /locus_tag="WHR07_000966"
     CDS             3253..3465
                     /locus_tag="WHR07_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ2130194.1"
                     /translation="MGCKVGVGWASAHQLHQSHQPHQSANLTGTGKPMPSESGRIGGG
                     GGLKPTLQPTNPTNPLFRVIPTKVGI"
     gene            complement(3549..3731)
                     /locus_tag="WHR07_000967"
     CDS             complement(3549..3731)
                     /locus_tag="WHR07_000967"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130195.1"
                     /translation="MGFSPPPPPIPPPSDGIGLPAPVRLAELVEWWDWWAEAHPTSTL
                     SPVLCIYLTHPPYVNT"
     gene            4045..4491
                     /locus_tag="WHR07_000968"
     CDS             4045..4491
                     /locus_tag="WHR07_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HEZ2130196.1"
                     /translation="MKAIQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQMSEAL
                     TLAEGQKSAVVEYYSDNGTFPNSNTSAGIAASNEIKGKYVASVKVEGNASVASITATM
                     NSSNVNKDIKGKTLVLVGKQNSGSFSWECKKGSVDEKFLPSTCRTK"
     gene            4945..5445
                     /locus_tag="WHR07_000969"
     CDS             4945..5445
                     /locus_tag="WHR07_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ2130197.1"
                     /translation="MSNYRRDFTRGAHYFFTLALQDRTKDYLIRHIDRLRLAYRETKT
                     RYPFETAAICILPDHLHFIMRLPEGDHDYPIRIAYLKTRFSQLIPKECRAPNGSKTKK
                     REAGIWQRRFWEHLIRDEQDLNNHRDYIYFNPVKHGYAASVKEWRYSSFFKDVEKGIY
                     PLDWGG"
     gene            5909..6475
                     /locus_tag="WHR07_000970"
     CDS             5909..6475
                     /locus_tag="WHR07_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
                     /protein_id="HEZ2130198.1"
                     /translation="MSLYALLLIALGMSMDAFAVALAKGAAVRMPPRKIAATALVFGT
                     VEALTPLAGWVGGFYAKPFISEWDHWAAFVLLGGLGLKMMREGLSGKAEDVRESKRES
                     LWMTVLTAFGTSIDSMIVGVGLAFMEVNIAFAAAVIGMATTVMVTVGLTAGRALGVLF
                     GKRAEFAGGLVLIAIGTWTLLSHLGLIG"
     gene            complement(6909..8945)
                     /locus_tag="WHR07_000971"
     CDS             complement(6909..8945)
                     /locus_tag="WHR07_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HEZ2130199.1"
                     /translation="MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQ
                     THTGWANTVEPLTGITERVGRIWGVVSHLNSVTDTPELRAVYNELMPEITVFFTEIGQ
                     DIELYNRFKTIKNSPEFDTLSPAQKTKLNHDLRDFVLSGAELPPEQQAELAKLQTEGA
                     QLSAKFSQNVLDATDAFGIYFDDAAPLAGIPKDSLAMFAAAAQSESKTGYKIGLQIPH
                     YLAVIQYADNRELREQIYRAYVTRASELSDDGKFDNTANIDRTLANALQTAKLLGFKN
                     YAELSLATKMADTPEQVLNFLHDLARRAKPYAEKDLAEVKAFARESLGLADLQPWDLG
                     YAGEKLREAKYAFSETEVKKYFPVGKVLNGLFAQIKKLYGIGFTEKTVPVWHKDVRYF
                     ELQQNGETIGGVYMDLYAREGKRGGAWMNDYKGRRRFADGTLQLPTAYLVCNFTPPVG
                     GKEARLSHDEILTLFHETGHGLHHLLTQVDELGVSGINGVEWDAVELPSQFMENFVWE
                     YNVLAQMSTHEETGEPLPKELFDKMLAAKNFQRGMFLVRQMEFALFDMMIYSEDDEGR
                     LKNWQQVLDSVRKEVAVIQPPEYNRFALSFGHIFAGGYSAGYYSYAWAEVLSADAYAA
                     FEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRGREPRIDALLRHSGFDNAA"
     gene            complement(9033..9905)
                     /locus_tag="WHR07_000972"
     CDS             complement(9033..9905)
                     /locus_tag="WHR07_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEZ2130200.1"
                     /translation="MEIWNRLDTWLGAVPIRAEAVESVAAVAALLLACALLLNIHFKR
                     HPDFGIESKRRFLVASRNITLLLVLFSLAFIWSAQIQTLALSMFAVAAAVVVATKELI
                     MCLSGSILRSATQQYSVGDYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVS
                     FPNSLLLSHPVRRDNILGDYVIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQ
                     RHLENVQAEKLFITPAARPRVTRVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRV
                     QYRLLNYPAGSETL"
     gene            10175..12565
                     /gene="gyrB"
                     /locus_tag="WHR07_000973"
     CDS             10175..12565
                     /gene="gyrB"
                     /locus_tag="WHR07_000973"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HEZ2130201.1"
                     /translation="MTEQKHEEYGADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMV
                     FEVLDNAIDEALAGHCDKITVTIHADHSVSVADNGRGMPTGIHPKEGRSAAEVIMTVL
                     HAGGKFDNNSYKISGGLHGVGVSVVNALSDWVTLTIYRDGKEHFVRFVRGETEEPLNV
                     VGDSDKKGTTVRFLASTETFGNVEYSFDILAKRIRELSFLNNGVDIELTDERDGKHES
                     FALSGGVAGFVQYMNRKKTPLHEKIFYAFGEKDGMSVECAMQWNDSYQESVQCFTNNI
                     PQRDGGTHLTALRQVMTRTINSYIEANEVAKKAKVETAGDDMREGLTCVLSVKLPDPK
                     FSSQTKDKLVSGEIGPVVNEVISQALTDFLEENPAEAKIITGKIVDAARAREAARKAR
                     EITRRKGVMDGLGLPGKLADCQEKDPALSELYLVEGDSAGGSAMQGRDRKFQAILPLK
                     GKILNVEKARFEKMLASQEVAALITALGAGIGKEEFNAEKLRYHRIIIMTDADVDGAH
                     IRTLLLTFFYRQMPELVERGYIYIAQPPLYKAKYGKQERYLKDELEKDQWLLGLALEK
                     AKIVSDSRTIEGEELANTAKQFLLAKTVIEQESRFVDELVLRAMLHASPIDLTSSENA
                     DKAVAELSGLLDEKEVALERIEGHEGHRFIKITRKLHGNVMVSYIEPKFLNSKAYQTL
                     TQTAAALKGMVGEGAKLYKGENGYDADSFETALDILMSVAQKGMSIQRYKGLGEMNPE
                     QLWETTMDPAVRRLLKVRIEDAIAADEVFVTLMGDEVEPRRAFIENNALIAQNIDA"
BASE COUNT         2988 a         3424 c         3498 g         2766 t
ORIGIN      
        1 cattcccgcc aaacccccgt cattcccgcg aaagcgggaa tccaggttcg ttgagtttcg
       61 gtcatttccg ataaattctt gcagctttgc gtttctagat tccctctttc gcgggaatga
      121 cgggatgcag gtttccgcgc ggacggattc ggcattcccg ctttcgcaga aatgccggct
      181 tttggtttgt tgtctttata agattattca gcaattattc tgcggttttg cgtttgtgtg
      241 ctgccggaat ctcaagggat tctctgtatt tggcaatggt gcggcgagaa acctccatgc
      301 cgcggaaagc cagcaggttg gcgagtgcct cgtcagaata cggcgtgggt gtggacgagg
      361 caaaaccggc ggcgggaaag ggattgagcg aagcaatgag gtcgagtgcg gcttcgagtg
      421 tgccgctgtc ggtttggggc aggtgttttt ttattcgtgc gagggtttgg ctgcggttgc
      481 cgtcaatgct gtcgagggcg tttcggacga tatgcagggc ggcgggtttg gcagcacatt
      541 cgcccgatct ttctatctgc agtatcagcg attcgttcaa atcggcggcg gccacgcctg
      601 ccgggtcgaa tttttgcaat gcagtcaggg cttgtttcag cattgcttca tccaacatcc
      661 actccaaggg cgtatggtcg aggatgtctt cgatgctgtc ggtcagataa ccttgctcgt
      721 caaggaaatc gatgaggatg tggacacagg cggattcttg gtcggaaagc gggtgttcgc
      781 atacttgcgc gtgcaggtat tgcttgaaat cctgctcgcc ggcgatgttg gacagcatat
      841 cttcgccttc gtctccgccg atttgacggg caggcgcagt gtaatggctg aactcggcat
      901 cggaaaattc atccgtgtct ttgcgttcga gcagggggtt gtccgacagc cagttttcga
      961 cctcgcgttc aagttcgata cccgacatct gcaatacgcg caaagattgt tgcagccgct
     1021 ggttgagctg ctgggtctgt ttgagcttta ttccgagtaa ggtcatgata atgtgggaga
     1081 aattgttatt ttcagcctgt cggcgcaaaa aaatgccgca aagcgtcatt gcattataaa
     1141 tggttttaat gagcgggttc ggattccgtt cgataacaaa aaacaaacga aaatcaaaaa
     1201 ccgattgctt ataacaatat taaatcgatt tcatagtttt aatagcgaga atcttggcgt
     1261 atagtcgcat ccatagtttt tacaaaagga aaacaaaatg tcgattcaag aaatttattg
     1321 caatcaagaa accggttacg aatacgcttt ccgccaaatc gtactgtaag ccgtttaccc
     1381 ccatttgacc aacctgagaa aaggaacaag agcgatgact acctccaaat gccccgtaac
     1441 ccatctgacc atgaacaacg gcgcgcctgt tgccgacaat caaaacagcc tgaccgccgg
     1501 tcctcgcggc cctctgctgg cgcaggattt gtggctgaat gaaaaactcg ccgacttcgt
     1561 gcgcgaagtc atccccgaac gccgtatgca cgccaaaggt tcgggcgcgt tcggtacgtt
     1621 taccgtaacg cacgacatca ccaaatacac ccgcgccaaa atcttcagcg aagtcggcaa
     1681 aaaaaccgag atgttcgccc gtttcaccac cgtggcaggc gaacgcggcg cagccgatgc
     1741 agaacgcgac atccgtggct ttgcgttgaa attctatacc gaagaaggca actgggatgt
     1801 ggtcggcaac aacacgcccg tgttcttcct gcgcgatccg cgtaagttcc ccgacttgaa
     1861 taaagccgtc aaacgcgatc cgcgcaccaa tatgcgttcc gccacaaaca actgggactt
     1921 ctggacgctg ctgcctgaag cgttgcacca agttaccatc gtgatgagcg accgcggcat
     1981 ccccgccggc taccgccata tgcacggctt cggttcgcat acctacagct tctggaacga
     2041 agcaggcgag cgtttttggg tgaaattcca tttccgcacc caacaaggca ttaaaaacct
     2101 gaccaacgaa gaagccgcca aaatcatcgc cgacgaccgc gaaagccatc agcgcgactt
     2161 atacgaagcc atcgaacgcg gcgagtttcc gaaatggacg atgtacatcc aagtcatgcc
     2221 tgaagcagac gcggaaaaag taccttatca tccgtttgac ttgaccaaag tttggccgaa
     2281 aaaagactat ccgctgattg aagtgggcga attcgagttg aaccgcaatc ccgaaaactt
     2341 cttcgccgat gtagaacaat ccgcctttgc tccgagcaac cttgtgcccg gtatcggcgc
     2401 gagccccgac aaaatgctgc aagcgcgttt gttcaattac gccgacgcgc aacgctaccg
     2461 cttgggcgtg aacttccgcc aaatccccgt caatcgtccg cgttgccctg ttcacagcaa
     2521 ccagcgcgac ggacaaggcc gagccgacgg caactacggc agcctgccgc actacgaacc
     2581 caacagcttc ggacaatggc agcagcagcc cgacttcgcc gaaccgcctt tgaaaatcaa
     2641 cggcgacgcg gcacactggg actaccgcca agatgatgac gactacttca gccaaccgcg
     2701 cgccctgttc aacctgatga acgacgcgca gaaacaggca ttgttcggca acaccgccgc
     2761 cgcaatgggc gacgcgcccg acttcatcaa ataccgccat atccgcaact gctaccgttg
     2821 cgatccggca tacggtgaag gcgtggcaaa agccctcgga ctgactgtcg aagacgcaca
     2881 agccgcccgc gcgaccgacc ccgcactcgg ccagcccggt ttgctgtaag ggggcattat
     2941 gtggatggaa attgaagaaa tcctgtcccg cgccgtccgc taccggaaat aaccgggcat
     3001 aaaaatgccg tctgaaacat tgtccgaccg tttcagacgg cattccccca tcccgccccg
     3061 ccgtttcagc gggcgttttt tattaaacgc aaaatatccc gtcattccca cgcaggcggg
     3121 aatctagaac gtaaaatcta aagaaacctt tttccccata agtttccgca ccgacagacc
     3181 tggattcccg cctgcgcggg aatgacggtt taggtatttc tgacgattca gtaagccgta
     3241 tcggactgta gaatgggctg taaggtgggc gtagggtggg cttcagccca ccaactccac
     3301 caatcccacc aaccccacca atccgccaat cttaccggta ccggcaaacc gatgccgtct
     3361 gaaagcggca gaatcggcgg aggcggtggg ctgaagccca ccctacagcc caccaatccc
     3421 accaacccac ttttccgcgt cattcccacg aaagtgggaa tctagaacgt aaaatctaaa
     3481 gaaacctttt tccccgataa gtttccgtgc cgacaggtct ggattcccac ctgcgcggga
     3541 atgacggttt aggtattcac ataaggcgga tgtgtaaggt agatgcatag gacgggcgat
     3601 agggtggacg tagggtgggc ttcagcccac caatcccacc attccaccaa ctccgccaat
     3661 cttaccggtg ccggcaaacc gatgccgtct gaaggcggcg gaatcggcgg aggcggtggg
     3721 ctgaagccca tcctacagcc acccccccca aaaaaaaaca aaaaaaaacc caatctgaca
     3781 aaatctgaca aaaaatgtca gccggaaact gacaaaaatt gtcacaactg acaaaaaacg
     3841 tcagcccgcc gcattattcc gccgcaggcc gcgccgcgtt gatataaaaa aataccaata
     3901 ccaaatagac aaataaaaaa tattctgtaa aatgtcgagc cgaagtaaaa aaaaccgcgg
     3961 tcaaatacat tacgggttta cgtttgcggc ggatgccgca aatttccaat caaacttaaa
     4021 cattttcaaa caggagtcat ccaaatgaaa gcaatccaaa aaggtttcac cctgatcgag
     4081 ctgatgatcg tcatcgccat cgtcggtatc ttggcagccg tcgccctgcc cgcataccaa
     4141 gactacaccg cgcgcgccca aatgtccgaa gccctgactt tggcagaagg tcaaaaatcc
     4201 gcagtggtcg agtattattc cgacaacggc acattcccga acagcaatac ttccgcaggt
     4261 attgctgcct ctaacgagat taaaggtaag tatgtggcat cggttaaggt tgaaggtaat
     4321 gcctctgttg cttctattac cgctaccatg aactctagta atgtgaataa ggacatcaaa
     4381 ggtaaaacct tggtactcgt cggcaaacaa aactccggct cgttctcttg ggaatgtaaa
     4441 aaaggttctg tggacgaaaa attcttgcca tctacctgcc gcaccaaata aggacaatga
     4501 ccgggtttga cccggtcgtg aaaacaaatg ccgcccgaac cgctcgggcg gcattttcta
     4561 ttcccctttg ccgctgtagg gctgtagggt gaggcgtagg tgcgtagggt gggctgtagg
     4621 gtgggcttca gcccaccatt ccaccaaccc aaccaactcc accacatcaa ggatttttgg
     4681 cgaaccgttg ggattcggcg ggtttcgagt ttcggcgggg attggcggaa tggttggttt
     4741 gggttgggtg ggaatggttg gattggcgga atggtgggct gaagcccacc ctacgaaaca
     4801 ccctacgaaa caccctacag cctacacatc agccctacgc cctccctacc catttccctg
     4861 caaatcccct aaaaatcctc ccgcacgccc tgaaaacaag gaataataca ggtttccgcc
     4921 catcgggcta aaaaggggat aaatatgtca aattaccgga gggacttcac gcgcggggcg
     4981 cactattttt tcacattggc tttgcaagac aggacgaagg attacctgat acggcatatc
     5041 gacaggctgc gcctcgccta tcgtgaaacg aaaacacgtt atccgtttga aacggcggca
     5101 atttgtattt tgccggatca cctgcatttc attatgcggc tgccggaagg cgaccacgat
     5161 tacccgatac ggattgcata tttgaaaacc cggttttccc aactcatccc caaagagtgc
     5221 cgcgccccca acgggagtaa aacaaaaaaa cgcgaagccg gcatttggca gcgcaggttt
     5281 tgggaacacc tgatccggga cgaacaagat ttaaacaacc accgggatta tatttatttc
     5341 aaccccgtga aacacgggta tgcggcgagt gtgaaggaat ggcgttattc ttccttcttc
     5401 aaagacgttg aaaaaggcat ttaccctttg gattggggag ggtaaagctc ccgccgccgc
     5461 caaaatccgc aggacggacg cggggcagat gagtcgggcg ggacgtaggg tgaggcgtag
     5521 gtgcgtaggg tggatgtgta gggtgggctt cagcccacca atccaaccac ctccgccaat
     5581 ccaaccattc ccaccaaccc aaaccaacca ttccgccaat ccccgccaaa aaccgaaacc
     5641 gccgaatccc gacggtttgc caaaaaccct tgatgcggtg gaattggcgg gattggatga
     5701 gttggtttgg cagaattggt gggctgaagc ccaccctaca gcccacccta caacccgccc
     5761 taagtcccac ctacgttcca tccgacgcat ccgccctacg gttccggatt cccctgcgaa
     5821 ccgccccgcg cacgaaaact gctttacgcg gcgtttttcg cgttttgctg ttttgctata
     5881 atccgccctt tttaaggacg ggtgcggtat gagtctttac gctttgctct tgattgcgct
     5941 ggggatgtcg atggatgcgt ttgccgtcgc gctggcaaag ggtgcggcgg tcaggatgcc
     6001 tccgcgcaaa attgcagcaa cagccttggt gttcggcacg gttgaggcac tcacgccgct
     6061 ggcaggctgg gtaggcggtt tttatgccaa accgtttatc agcgaatggg accattgggc
     6121 ggctttcgtc ctgctgggcg ggctgggtct gaaaatgatg cgcgaagggc tgtccggcaa
     6181 ggcggaagat gtacgcgaaa gcaaacggga aagcctatgg atgacggttt tgactgcttt
     6241 tggaaccagc atcgactcta tgatcgtcgg ggtgggcttg gcgtttatgg aggtaaacat
     6301 cgcctttgcc gccgccgtca tcggcatggc gacgacggtg atggttacgg tcgggctgac
     6361 ggcgggaagg gctttgggcg tattgttcgg caaacgcgcc gagtttgccg gaggtttggt
     6421 gttgattgcc atcggtacat ggacgctctt gtcgcacttg gggctgatcg ggtaaggact
     6481 gccaaaaaat gctgtctgaa gcgttgtttg accgtttcag acggcatttt ttattttttg
     6541 ggcgtagggc gaatccgtaa ggcgggatgt aaggtgggat gtagggtggg cttcagccca
     6601 ccaatcccac cacctccgcc gctcccgcca aatccgccat tcctcgccga aaaccgaaac
     6661 cgccgaatcc cgacggtttg ccaaaaaccc ttgatgcggt gggaatggtg ggaacggtgg
     6721 gattggcgga ggagatggga ttggtgggct gaagcccacc ctacgcccac tgtttttgat
     6781 tttttgtttt tgcgagaatg gcgggatttt ggcttactgt ttttgtgaaa atggcgaaac
     6841 cgcgcaaatg ctgatgccgt ctgaaacact gtttgattgt ttcagacggc attttttgtt
     6901 cacatcgatc aagccgcgtt gtcgaaaccg ctgtggcgca agagtgcgtc tatgcgcggt
     6961 tcgcgtccgc ggaaggcttt gaaggattct gccgcgctgc gcgatccgcc gacggcgagg
     7021 atttcctgcc aaaagcgttt gcctgtggcg gcgacatcgt cgctttcttc aaaggcggcg
     7081 tatgcgtccg cgctcaatac ttccgcccac gcgtagctgt aatagcctgc ggaatagccg
     7141 cctgcgaaga tgtggccgaa gctcaaggcg aagcggttgt attcgggcgg ttggatgacg
     7201 gcgacttctt tgcgcacgct gtctaaaacc tgttgccagt ttttcagacg gccttcgtcg
     7261 tcttcgctgt aaatcatcat atcgaagagg gcgaactcca tctggcggac gaggaacatg
     7321 ccgcgttgga agtttttggc ggcgagcatt ttgtcgaaga gttctttcgg caggggctcg
     7381 ccggtttctt cgtgggtgga catttgcgcc aatacattgt attcccaaac gaaattttcc
     7441 ataaactggc tgggcagttc gaccgcgtcc cattctacgc cgttgatacc ggacacgccc
     7501 agttcgtcca cttgggtaag caggtggtgc aggccgtgtc cggtttcgtg gaagagggtg
     7561 aggatttcgt catggctcaa gcgggcttct ttgccgccga cgggcggggt gaagttgcag
     7621 acgaggtagg cggtgggcag ttgcagcgtg ccgtcggcga agcggcggcg gcctttgtag
     7681 tcgttcatcc atgcgccgcc gcgtttgcct tcgcgtgcgt acaaatccat ataaacgccg
     7741 cctatggttt cgccgttttg ttgcaattca aaatagcgca cgtctttgtg ccagacgggg
     7801 acggtttttt cggtaaatcc gatgccgtag agttttttga tttgggcgaa cagtccgttt
     7861 aatactttgc cgacggggaa gtattttttg acttcggttt cgctgaatgc gtatttggct
     7921 tcgcgcagtt tttcgccggc gtagcccaag tcccacggtt gcaaatcggc gagaccgagg
     7981 ctttcgcggg cgaaggcttt gacttcggcg aggtcttttt cggcgtaggg tttggcgcgg
     8041 cgggcgaggt cgtgcaggaa gtttaaaact tgttcgggcg tgtccgccat tttggttgcc
     8101 agcgacaatt cggcgtagtt tttgaagccg agcagtttgg cggtttgcag ggcgtttgcg
     8161 agcgtgcggt cgatgttggc ggtgttgtcg aatttgccgt cgtctgacag ttcgctggcg
     8221 cgggtaacgt aggcgcggta gatttgttcg cgcagttcgc ggttgtcggc gtattggatg
     8281 acggcgaggt agtgcggaat ctgcaagccg attttgtagc ctgttttgct ttcgctttgc
     8341 gcggcggcgg caaacatggc gagcgagtct ttgggaatgc cggcaagcgg tgcggcatcg
     8401 tcaaagtaaa tgccgaacgc gtcggtcgcg tctaggacgt tttgggagaa tttggcggaa
     8461 agttgcgcgc cttcggtttg cagttttgcc agttctgcct gctgttcggg cggcagttcc
     8521 gcgccgctaa ggacgaaatc gcgcaggtcg tggttgagct tggttttttg tgcgggggag
     8581 agggtgtcga attcggggga atttttgatg gttttgaagc ggttgtacag ctcgatgtct
     8641 tgtccgattt cggtgaagaa gacggtgatt tcgggcatca gttcgttata gacggcgcgc
     8701 agttcgggcg tatcggtgac ggagttgagg tgcgacacca cgccccaaat cctgccgacg
     8761 cgttcggtga tgccggtcag gggttcgaca gtgtttgccc agccggtgtg cgtttgggct
     8821 ttgatggcgg cgatttgttc gcgcgcttcg gcgatggcgg tttgcagggc gggtttgatg
     8881 tcttcggttt tgatttgatc aaaacggggt tcttcgccca aatggagcag tgcgttgtca
     8941 gtcataagat gggtttcctt tgcgtgttgt gcttcagaca gcatatcggc aatatgccgt
     9001 ctgaagccgg aaatggggtc ggtcggggaa agttaaagtg tttcggagcc ggcggggtaa
     9061 tttaacaggc ggtattgtac gcgcaaaaat tcgtccataa ccgcctgttg gatttccagc
     9121 cgctttgaaa cgggggaggc gaagcggacg atgatgcggt atgccttgtc atcgtacggc
     9181 acgcgggtaa cgcgcggtct ggcggcgggc gtgataaaca gtttttccgc ctgcacgttt
     9241 tccaaatgcc gttggatggc ggggatgtag ggcgcgcaca agggctcgag tacggctttc
     9301 agacggcata cggcttcatc cgaatccaaa tggatgggga cggggatttc gaccgtatgg
     9361 atgacatagt cgcccaaaat attgtcgcgg cgcacggggt ggctcaacaa caggctgttg
     9421 gggaaagaaa cggtggttcc cgcaagctgt ccgaccaagg ggttcggacc gacctgcatc
     9481 atcagcgtgt tcaacaggtt gatgtcgacc acgcgcccgc gcaggccgtt gatttcgata
     9541 tagtcgccga ccgagtattg ctgggtggca gaccttaaaa tactgcccga cagacacata
     9601 atcagttcct tcgtcgccac gacgaccgcc gccgccaccg caaacatcga caaagccagc
     9661 gtttggattt gcgccgacca gataaatgcc agcgaaaaca gcaccaaaag cagcgttata
     9721 ttgcggctgg caaccaaaaa ccgccgcttg ctttcgatgc cgaaatccgg atgccgtttg
     9781 aagtggatat tcaacagaag ggcgcacgcc agcagcaaag ccgcaaccgc cgccacggat
     9841 tcgaccgcct ccgcacgtat cgggacggca ccgagccaag tgtccaacct attccatatt
     9901 tccatttccg cgcccctgtc cgaaaagtat agggtgtaga ttttagtggc aaaaaaacgc
     9961 ttttgccact ttacgggaaa atccccgacc tgatgccgga ggcaaacgta ccgtttcatc
    10021 ttttcccggc ggcacactga tgcggataac gctgaattag gcggcaaaat cggctataat
    10081 acacaattat atatgccgtc ccgcccgctt tttccacaag gtgcggactt gttttggcgg
    10141 catcgcaaaa tcttttcaaa atccggcaaa aaatatgact gaacaaaaac acgaagaata
    10201 cggcgccgac agcattcagg tgctcgaagg cttggaagcg gtacgcaaac gccccggcat
    10261 gtacatcggc gacacgcagg acggcagcgg cctgcaccat atggtgttcg aagtattgga
    10321 caacgccatt gacgaagcac tcgccggaca ttgcgacaaa atcacggtaa cgatacacgc
    10381 cgaccattcc gtcagcgtcg ccgacaacgg gcgcggtatg cccaccggca tccacccgaa
    10441 agaaggacgc tccgccgccg aagtcatcat gaccgtattg cacgcgggcg gtaaattcga
    10501 caacaacagc tacaaaatct ccggcggcct gcacggcgtg ggcgtgtccg tcgtcaacgc
    10561 gctgtccgac tgggtaacgc tgaccatcta ccgcgacggc aaagaacact tcgtccgctt
    10621 cgtgcgcggc gaaaccgaag agccgctgaa cgttgtcggc gattccgata aaaaaggcac
    10681 gaccgtgcgc ttcctcgcca gtacggaaac cttcggcaac gtcgaataca gcttcgacat
    10741 ccttgccaaa cgcatccgcg aactttcgtt cctgaacaac ggcgtggaca tcgaattgac
    10801 cgacgagcgc gacggcaaac acgaaagctt cgccctttcc ggcggcgtgg ctggattcgt
    10861 gcaatacatg aaccgcaaaa aaacgccctt gcacgaaaaa atcttctacg cgttcggcga
    10921 gaaagacggc atgagcgtcg aatgcgcaat gcaatggaac gacagctatc aggaaagcgt
    10981 gcagtgcttc accaacaaca tccctcagcg cgacggcggt acgcacctga ccgcgttgcg
    11041 ccaagtgatg acgcgcacca tcaacagcta catcgaagcc aacgaagtcg ccaaaaaagc
    11101 caaagtggaa accgccggcg acgatatgcg cgaaggtttg acctgcgtgt tgtccgtcaa
    11161 actgcccgac cccaaatttt cgtcccaaac caaagacaaa ctggtttccg gcgaaatcgg
    11221 tcccgtcgtc aacgaagtca tcagccaagc cctgaccgac ttcctcgaag aaaaccctgc
    11281 cgaagccaaa atcatcaccg gcaaaatcgt cgatgccgcc cgcgcgcgcg aagccgcccg
    11341 caaagcccgc gaaatcaccc gccgcaaagg cgtgatggac ggtttgggcc tgccgggcaa
    11401 actcgccgac tgccaagaaa aagaccccgc attgtcagaa ctttatctgg tcgagggcga
    11461 ttctgcaggc ggttccgcca tgcaggggcg cgaccgcaaa ttccaagcga ttttgccgct
    11521 taagggcaag attttgaacg ttgaaaaggc gcgctttgaa aaaatgctcg ccagtcagga
    11581 agtagccgct ttgattaccg cgttgggcgc gggcatcggc aaggaagaat tcaatgccga
    11641 gaagctgcgt taccaccgca tcattatcat gaccgatgcc gacgtggacg gcgcgcacat
    11701 ccgcacccta cttttgacct tcttctaccg ccaaatgccc gaactggtcg agcgcggcta
    11761 catctatatc gcccagccgc ctttgtataa agcgaaatac ggcaaacagg agcgttacct
    11821 caaagacgaa ctggaaaaag accaatggct gctcggttta gccttggaaa aagccaaaat
    11881 cgtttcagac agccgcacca tcgaaggcga agagcttgcc aataccgcca aacaattcct
    11941 gttggccaaa accgtcatcg aacaggaaag ccgcttcgta gacgaactcg tcctgcgcgc
    12001 catgctacac gcgtcgccca ttgatttgac gtcgtctgaa aacgccgata aagccgttgc
    12061 cgaactttcc ggtctgcttg acgaaaaaga agtcgccctc gaacgcatcg aaggtcatga
    12121 aggacaccga ttcatcaaaa tcacgcgcaa gctgcacggc aacgtcatgg tcagctacat
    12181 cgaacccaag ttcctcaaca gcaaagccta ccaaaccctc acccaaaccg ccgccgcgct
    12241 caaaggcatg gtcggcgagg gtgccaagct ttacaaaggc gaaaacgggt acgacgcgga
    12301 cagctttgaa accgctttgg acatcttgat gagcgttgcc caaaaaggta tgtccatcca
    12361 acgatacaaa ggcttgggcg agatgaaccc cgaacagctg tgggaaacca cgatggatcc
    12421 cgccgtgcgc cgcctgttga aagtgcgcat cgaagacgcc atcgccgccg acgaagtgtt
    12481 cgttacgctg atgggcgacg aggtcgagcc gcgccgtgcc tttatcgaaa acaacgcgct
    12541 gattgcccaa aatatcgacg cataagtgcc gttttaaaaa aggagacggg catcgtgccg
    12601 cgtctccttt tggtttgtca aacggaagcc atgccgtctg aaaccgcctt tcggagcaaa
    12661 accatgatca gcattt
//
LOCUS       DAWGKF010000051        12655 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.051, whole genome shotgun sequence.
ACCESSION   DAWGKF010000051 DAWGKF010000000
VERSION     DAWGKF010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12655)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12655)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12655
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.051"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            45..458
                     /locus_tag="WHR07_000974"
     CDS             45..458
                     /locus_tag="WHR07_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEZ2130202.1"
                     /translation="MMPAYAYAALAFSAFTSATLLPGTSEAAFALFVRRFPEHAYGAL
                     LCAGLANGLGSMVSYWMGRLLPSRKMPSEKTLNLMRRFGIWLLPFAWLPVVGDALPLA
                     AGWLRLNPWTSGLMLVIGKTARYAFILWGMQYYAA"
     gene            504..1133
                     /gene="nth"
                     /locus_tag="WHR07_000975"
     CDS             504..1133
                     /gene="nth"
                     /locus_tag="WHR07_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEZ2130203.1"
                     /translation="MNRHIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATD
                     VGVNKATAKLFPVADTPQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNG
                     EVPEDREALESLPGVGRKTANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVE
                     DKLMRFIPKEFLMDAHHWLILHGRYTCKALKPQCQTCIINDLCEYPAKA"
     gene            1271..2770
                     /locus_tag="WHR07_000976"
     CDS             1271..2770
                     /locus_tag="WHR07_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HEZ2130204.1"
                     /translation="MFKKYQYLALAALCAASLAGCDKAGSFFGADKKEASFVERIEHT
                     KDDGSVSMLLPDFVQLVQSEGPAVVNIQAAPAPRTQNGSSNAETDSDPLADSDPFYEF
                     FKRLVPNMPEIPQEEADDGGLNFGSGFIISKDGYILTNTHVVTGMGSIKVLLNDKREY
                     TAKLIGSDVQSDVALLKIDATEELPVVKIGNPKDLKPGEWVAAIGAPFGFDNSVTAGI
                     VSAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISF
                     AIPIDVAMNVAEQLKNTGKVQRGQLGVIIQEVSYGLAQSFGLDKAGGALIAKILPGSP
                     AERAGLQEGDIVLSLDGGEIRSSGDLPVMVGAITPGKEVSLGVWRKGEEITIKVKLGN
                     AAEHIGASSKTDEAPYTEQQSGTFSVESAGITLQTHTDSSGGHLVVVRVSDAAERAGL
                     RRGDEILAVGQVPVNDEAGFRKAMDKAGKNVPLLIMRRGNTLFIALNLQ"
     gene            2970..4490
                     /locus_tag="WHR07_000977"
     CDS             2970..4490
                     /locus_tag="WHR07_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HEZ2130205.1"
                     /translation="MQLIDYSHSFFSVVPPFLALALAIITRRVLLSLGIGILVGVAFL
                     VGGNPVDGLTHLKDMVVGLAWSDGDWSLGKPKILVFLILLGIFTSLLTYSGSNQAFAD
                     WAKRHIKNRRGAKMLTACLVFVTFIDDYFHSLAVGAIARPVTDKFKVSRAKLAYILDS
                     TAAPMCVLMPVSSWGASIIATLAGLLVTYKITEYTPMGTFVAMSLMNYYALFALIMVF
                     VVAWFSFDIGSMARFEQAALNEAHDETAVSDGSRGRVYALIIPVLALIASTVSAMIYT
                     GAQASETFSILGAFENTDVNTSLVFGGTCGVLAVVLCTLGTIKTADYPKAVWQGAKSM
                     FGAIAILILAWLISTVVGEMHTGDYLSTLVAGNIHPGFLPVILFLLASVMAFATGTSW
                     GTFGIMLPIAAAMAVKVDPSLIIPCMSAVMAGAVCGDHCSPISDTTILSSTGARCNHI
                     DHVTSQLPYALTVAAAAASGYLALGLTKSALLGFGTTGIVLAVLIFLLKDKKRANA"
     gene            4547..5632
                     /gene="nagZ"
                     /locus_tag="WHR07_000978"
     CDS             4547..5632
                     /gene="nagZ"
                     /locus_tag="WHR07_000978"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HEZ2130206.1"
                     /translation="MTVPHIPRGPVMADIAAFRLTEEEKQRLLDPAVGGIILFRRNFQ
                     NIEQLKTLTAEIKALRTPELIIAVDHEGGRVQRFIEGFTRLPAMSTLGEIWDKDGASA
                     AETAAGQVGRVLATELSACGIDLSFTPVLDLDWGNCPVIGNRSFHHNPEAVAHLALAL
                     QKGLAKGGMKSCGKHFPGHGFVEGDSHLVLPEDRRSLSELEAADLAPFHIMSREGMAA
                     VMPAHVVYPQVDTKPAGFSEIWLKQILRRDIGFKGVIFSDDLTMEGACGVGGLKERAR
                     ISFEAGCDIVLVCNRPDLVDELREDFRIPDNPALAQRWQYMANTLGSAAAQAVMQTAD
                     FQEAQAFVAGLASPQDTAGGVKVGEAF"
     gene            5860..5936
                     /locus_tag="WHR07_000979"
     tRNA            5860..5936
                     /locus_tag="WHR07_000979"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5894..5896,aa:Pro,seq:cgg)
     gene            complement(6272..6910)
                     /locus_tag="WHR07_000980"
     CDS             complement(6272..6910)
                     /locus_tag="WHR07_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HEZ2130207.1"
                     /translation="MKKINVAPENPQYRIVEIFESLQGEGWNTGIPAVFVRLGKCNLA
                     CGWCDTDYLTFGMMSLSDILGCLKTYAARNIIITGGEPTIQPHLDMLLDMLKAEGYFL
                     CIETNGLNPAPPQIDYVATSPKACYAAKYEKSCIETADEVRIVADGDVLAFCENMERK
                     IRAHHYYLSPCEQDGAMNIYDTIRQIGILNSRPDASVHWQLSVQTHKWAGIE"
     gene            complement(6907..7278)
                     /locus_tag="WHR07_000981"
     CDS             complement(6907..7278)
                     /locus_tag="WHR07_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HEZ2130208.1"
                     /translation="MKLLSTLLVLLVTAEHFYIAWLEMTQIPSEKAAEIFKLPYEFME
                     QKRVQTLFGNQGLYNGFLGIGLVWSRFAAPDNAVYGATVLFLGFVLIAAAWGAFSSGN
                     KGILVKQGLPAFLAAAAVLAV"
     gene            complement(7547..7969)
                     /gene="queD"
                     /locus_tag="WHR07_000982"
     CDS             complement(7547..7969)
                     /gene="queD"
                     /locus_tag="WHR07_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HEZ2130209.1"
                     /translation="MKITKIFTFDSSHMLDGHDGKCQNLHGHTYKLEITVSDGIIKGG
                     AKDGMVMDFTDLKAIVKQHITDPFDHAFIYHGGNSRESQIAALLEGWNMKTLRLPCRT
                     TAENMAVEMYDRLKNAGLNVCRVKLWETPTSCAEYEGE"
     gene            complement(7976..8491)
                     /locus_tag="WHR07_000983"
     CDS             complement(7976..8491)
                     /locus_tag="WHR07_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1543 domain-containing protein"
                     /protein_id="HEZ2130210.1"
                     /translation="MPKLHMFYLGGNAGRSNIEVHDIQFAVCDDYREAVPALKAAWFG
                     DADKIHIDGWQVVEWADGYDIAVSETPKTEMPSEHAPRLYFANVGGYRAGQLAEAHAF
                     GLFAAATPAEAKQKALQTLLTDHVQQHKDNLKDVDNLLALDRIGNFHIRLTPNPHGKP
                     AEIGFQGYLPI"
     gene            complement(8519..9178)
                     /gene="queC"
                     /locus_tag="WHR07_000984"
     CDS             complement(8519..9178)
                     /gene="queC"
                     /locus_tag="WHR07_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HEZ2130211.1"
                     /translation="MSNQKALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHA
                     VELERARWIAQDLGVKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNAL
                     FLLYAAIYAKGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPL
                     MYLTKAQTWALADEMGVLDYIREQTHTCYNGIVGGCRECPSCILRERGLAEYLESKKA
                     V"
     gene            9283..9708
                     /locus_tag="WHR07_000985"
     CDS             9283..9708
                     /locus_tag="WHR07_000985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130212.1"
                     /translation="MPSEHAAYADLMASSAKRLLCAKAILFSSAVRTGAAVGNIFFDG
                     FADGGDFGDGAQYGFATFNAVDAASDSAGGIAGATVLEIVEDEDFEGDLGSWADSVKM
                     VRSSDGITVVPMPSETAAVQAFVPDGKIGYNIGHQCPTY"
     gene            9723..10949
                     /locus_tag="WHR07_000986"
     CDS             9723..10949
                     /locus_tag="WHR07_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY family inner membrane protein"
                     /protein_id="HEZ2130213.1"
                     /translation="MTFLQRLQGLADNKICAFAWFVVRRFDEERVPQAAASMTFTTLL
                     ALVPVLTVMVAVASIFPVFDRWSDSFVSFVNQTIVPQGADMVFDYINAFREQANRLTA
                     IGSVMLVVTSLMLIRTIDNTFNRIWRVNSQRPWMMQFLVYWALLTFGPLSLGVGISFM
                     VGSVQDAALASGAPQWSGALRTAATLTFMTLLLWGLYRFVPNRFVPARQAFVGALATA
                     FCLETARSLFTWYMGNFDGYRSIYGAFAAVPFFLLWLNLLWTLVLGGAVLTSSLSYWR
                     GEAFRRGFDSRGRFDDVLKILLLLDAAQKKGKALPVQEFRRHINMGYDELGELLEKLA
                     RHGYIYSGRQGWVLKTGADSIELNELFKLFVYRPLPVERDHVNQAVDAVMTPCLQTLN
                     MTLAEFDAQAKKQQQS"
     gene            complement(10970..11251)
                     /locus_tag="WHR07_000987"
     CDS             complement(10970..11251)
                     /locus_tag="WHR07_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ2130214.1"
                     /translation="MIHEEICAMPMGYETLIGDMGSALSGGQKQRIVLARALYCEPKI
                     LFLDAATSHLDIANEKAVNANLNGLSIIKIMAAHRKETVESADRKMSLG"
     gene            complement(11330..11464)
                     /locus_tag="WHR07_000988"
                     /pseudo
     CDS             complement(11330..11464)
                     /locus_tag="WHR07_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(11463..11921)
                     /locus_tag="WHR07_000989"
     CDS             complement(11463..11921)
                     /locus_tag="WHR07_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130215.1"
                     /translation="MLTKLKILLFLFLFVFVLAINLLFFFFSSDIESFGNYQFEYVYD
                     KGWPANYILVMKDGTEGNFDKIISGLVLEYYKEDDNIYFSYIDGQGFASDSCYYKPEI
                     LYGKIILNKNHIININSMEKNNFLSEDKIMKGTRNWLADPKNKCNIQTLD"
     gene            complement(12485..>12655)
                     /locus_tag="WHR07_000990"
     CDS             complement(12485..>12655)
                     /locus_tag="WHR07_000990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130216.1"
                     /translation="TIGGGLVLGGCAGAHLARKEPLILTGKTGAGASAIANASIGYQW
                     TVNLSEPKEGAK"
BASE COUNT         2945 a         3398 c         3188 g         3124 t
ORIGIN      
        1 cgtacaatcc gtcgccgatt tttgcctgtt tgagactgtt tgcaatgatg cccgcctacg
       61 cctacgccgc gctcgccttt tccgccttca cttccgccac cctcctgccc ggcacatccg
      121 aagccgcctt tgccctgttc gtccgccgct ttcccgaaca cgcatacggc gcgttgctgt
      181 gcgccggcct tgccaacgga ttgggcagta tggtttccta ttggatggga cgtttgctgc
      241 cttcccgaaa aatgccgtct gaaaaaacac tgaatctgat gcggcgtttc ggtatttggc
      301 tgcttccgtt tgcctggctg cccgtcgtcg gcgacgcact gccgcttgcc gccggctggc
      361 tgcggttgaa tccgtggaca agcgggctga tgctggttat cggcaaaacg gcgcgttacg
      421 ccttcattct gtggggaatg caatattacg ccgcctgaac cgtgcgttat aatgccgacc
      481 gcacaaaccg actgcacaaa aaaatgaaca gacacatccg ccaagaaatt ttcgaacgct
      541 tccgcgccgc caacccccat ccgaccaccg agctgaattt caactcccct ttcgagcttt
      601 taattgccgt tctgctttcg gcgcaggcga ccgatgtcgg cgtaaacaag gcgacggcga
      661 agctgtttcc ggttgccgat acgccgcagg cgatgctgga tttgggtttg gacggcgtga
      721 tggaatacac gaaaaccatc gggctgtata aaaccaagtc caagcacatc atgcaaacct
      781 gccgcatcct gctggaaaaa tacaacggcg aagtgccgga agaccgcgag gctttggaat
      841 cgttgcctgg cgtggggcgc aaaacggcaa acgtggtatt gaacacagcg ttcggacacc
      901 ccgttatggc ggtcgatacg catattttcc gcgtgtccaa ccgaaccaaa atcgcccccg
      961 ggaaagatgt gcgcgaagtc gaagacaaac tgatgcgctt cattcctaaa gaatttctga
     1021 tggacgcgca ccactggctg attttgcacg gacgctacac ctgcaaggca ctcaaaccgc
     1081 aatgccaaac ctgcatcatc aacgatttgt gcgaatatcc cgccaaagcc tgaccgccgc
     1141 cgcccttcaa aatgaaacgc ttgaaaattc ggacggacgt tgtagaattt caacctatgc
     1201 cgtctgaagc cgacaaaatg cgcttcagac ggcattaaag ccggtaccgg catccgacaa
     1261 aggacaaaac gtgttcaaaa aataccaata cctcgctttg gcagcactgt gtgccgcctc
     1321 gctggcaggc tgcgacaaag ccggcagctt tttcggtgcg gacaaaaaag aagcatcttt
     1381 cgtagaacgc atcgaacaca ccaaagacga cggcagcgtc agtatgctgc tgcccgactt
     1441 tgtccaactg gttcaaagcg aaggcccggc agtcgtcaat attcaggcag cccccgcccc
     1501 gcgcacccaa aacggcagca gcaatgccga aaccgattcc gacccgcttg ccgacagcga
     1561 cccgttctac gaatttttca aacgcctcgt cccgaacatg cccgaaatcc cccaagaaga
     1621 agcagatgac ggcggattga acttcggttc gggcttcatc atcagcaaag acggctatat
     1681 tctgaccaat acgcacgtcg ttaccggcat gggcagtatc aaagtcctgc tcaacgacaa
     1741 gcgcgaatat accgccaaac tcatcggttc ggatgtccaa tccgatgtcg cccttctgaa
     1801 aatcgacgca acggaagagc tgcccgtcgt caaaatcggc aatcccaaag atttgaaacc
     1861 aggcgaatgg gtcgctgcca tcggcgcgcc cttcggcttc gacaacagcg tgaccgccgg
     1921 catcgtgtcc gccaaaggca gaagcctgcc caacgaaagc tacacacctt tcatccaaac
     1981 cgacgttgcc atcaatccgg gcaactccgg cggcccgctg ttcaacttaa aaggacaggt
     2041 cgtcggcatc aactcgcaaa tatacagccg cagcggcgga ttcatgggca tttccttcgc
     2101 catcccgatt gacgttgcca tgaatgtcgc cgaacagctg aaaaacaccg gcaaagtcca
     2161 acgcggacaa ctgggcgtga ttattcaaga agtatcctac ggtttggcac aatcgttcgg
     2221 tttggacaaa gccggcggcg cactgattgc caaaatcctg cccggcagcc ccgcagaacg
     2281 tgccggcctg caggagggcg acatcgtcct cagcctcgac ggcggagaaa tacgttcttc
     2341 cggcgacctt cccgttatgg tcggcgccat tacgccggga aaagaagtca gcctcggcgt
     2401 atggcgcaaa ggcgaagaaa tcacaatcaa agtcaagctg ggcaacgccg ccgagcatat
     2461 cggcgcatca tccaaaacag atgaagcccc ctacaccgaa cagcaatccg gtacgttctc
     2521 ggtcgaatcc gcaggcatta cccttcagac acataccgac agcagcggcg gacacctcgt
     2581 cgtcgtacgg gtttccgacg cggcagaacg cgcaggcttg aggcgcggcg acgaaattct
     2641 tgccgtcggg caagtccccg tcaatgacga agccggtttc cgcaaagcta tggacaaggc
     2701 aggcaaaaac gtccccctgc tgatcatgcg ccgtggcaac acgctgttta tcgcattaaa
     2761 cctgcaataa cacacataat ttaaccaaaa tattttttaa atgataaaat gcccgtcaat
     2821 accgattaac gggcatttta aaaaatcagt taattgattt caaataagta ttttccggaa
     2881 cagaaaatac tttcgcccat tttgccaaca aaatccgaac cgttgcggac agaaaccgcc
     2941 ccatccggac gcttaacacc cccataacca tgcagctgat cgactattca cattcatttt
     3001 tctcggttgt gccacccttt ttggcactgg cacttgccat cattacccgc cgcgtactgc
     3061 tgtctttagg catcggtatt ctggtcggcg ttgccttttt ggtcggcggc aaccccgtcg
     3121 acggtctgac acacctgaaa gacatggtcg tcggcttggc ttggtcagac ggcgattggt
     3181 cgctgggcaa accaaaaatc ctggttttcc tgatactttt gggtattttt acttccctgc
     3241 tgacctactc cggcagcaat caggcgtttg ccgactgggc aaaacggcac attaaaaacc
     3301 ggcgcggcgc gaaaatgctg accgcctgcc tcgtgttcgt aacctttatc gacgactatt
     3361 tccacagcct cgccgtcggt gcgattgccc gccccgttac cgacaagttt aaagtttccc
     3421 gcgccaaact cgcctacatc ctcgactcca ctgccgcgcc tatgtgcgtg ctgatgcctg
     3481 tttcaagttg gggcgcgtcg attatcgcca cgcttgccgg attgctcgtt acctacaaaa
     3541 tcaccgaata cacgccgatg gggacgtttg tcgccatgag cctgatgaac tattacgcgc
     3601 tgtttgccct gattatggtg ttcgtcgtcg catggttttc cttcgacatc ggctcgatgg
     3661 cgcgtttcga acaagccgcg ttgaacgaag cccacgatga aactgccgtt tcagacggca
     3721 gccggggcag ggtttacgca ttgattattc ccgttttggc cttaatcgcc tcaacggttt
     3781 ccgccatgat ctacaccggc gcgcaggcaa gcgaaacctt cagcattttg ggggcatttg
     3841 aaaacacgga cgtaaacact tcgctggtat tcggcggcac ttgcggcgtc cttgccgtcg
     3901 ttctctgcac gctcggcacg attaaaaccg ccgactatcc caaagccgtt tggcagggtg
     3961 cgaaatctat gttcggcgca atcgccattt taatcctcgc ttggctcatc agtacggttg
     4021 tcggcgaaat gcacaccggc gattacctct ccacactggt tgcgggcaac atccatcccg
     4081 gcttcctgcc cgtcatcctc ttcctgctcg ccagcgtgat ggcgtttgcc acaggcacaa
     4141 gctgggggac gttcggcatt atgctgccga ttgccgccgc catggcggtc aaagtcgatc
     4201 cctcactgat tatcccgtgt atgtccgcag taatggcggg ggcggtatgc ggcgaccact
     4261 gttcgcccat ctccgacacg accatcctgt cgtccacagg cgcgcgctgc aaccacatcg
     4321 accacgttac ctcgcaactg ccttacgcct taaccgttgc cgccgccgcc gcatcgggct
     4381 acctcgcatt gggtctgaca aaatccgcgc tgttgggctt tggcacgaca ggcattgtat
     4441 tggcggtgct gatttttctg ttgaaagata aaaaacgcgc caacgcctga cccctttccc
     4501 tgttcagacg gcatatgccg tctgaagctt tttggagcaa accgcaatga ccgtccccca
     4561 tattccgcgc ggccccgtca tggcagacat tgccgccttc cgcctgaccg aagaggaaaa
     4621 gcaacgcctg ctcgatcccg ccgtaggcgg catcatcctc ttccgccgca acttccaaaa
     4681 catcgaacaa ctcaaaacac tcaccgccga aatcaaagcc ctgcgcacac ccgaactcat
     4741 tatcgccgtc gatcacgaag gcggcagggt gcaacgtttc atcgaaggct tcacccgcct
     4801 gcccgcaatg agtacgctcg gcgagatttg ggacaaagac ggcgcgtccg ccgccgaaac
     4861 cgccgccgga caagtcggcc gggttttggc aaccgagctt tccgcctgcg gcatcgattt
     4921 gtccttcacg cccgtcttag atttggactg gggaaactgc cccgtcatcg gcaaccgcag
     4981 tttccaccac aatcccgaag cggtcgccca cctcgccctc gcccttcaaa aaggtttggc
     5041 aaaaggcggt atgaaatcct gcggcaaaca ttttcccgga cacggatttg tcgaaggaga
     5101 cagccatctg gtcttgccgg aagacaggcg cagcctgtcc gaactcgaag ccgccgacct
     5161 cgcccccttc cacattatga gccgcgaagg tatggcggcg gttatgcccg cccacgtcgt
     5221 ttatccacaa gtggacacaa agcccgcagg gttttccgaa atctggctca aacaaatttt
     5281 gcgccgcgat atcggattca aaggcgtgat tttctcggac gatttgacta tggagggcgc
     5341 gtgcggtgtc ggcggcctca aagaacgcgc ccgcatttcc tttgaggcag gttgcgacat
     5401 cgtcctcgtc tgcaaccgtc ccgaccttgt ggacgaactg cgcgaagatt tccgcattcc
     5461 tgacaatccc gctttggcgc aacgttggca atatatggcc aacacgctcg gcagtgccgc
     5521 cgcgcaagcc gttatgcaga cggcggattt ccaagaggcg caagcctttg ttgccggcct
     5581 tgcctcgccg caggatacag cgggcggcgt aaaagtcggc gaagcctttt aaaccggctg
     5641 cgtttcaaca atctgccgat ttcatcaacc gtttgtcagg gaaaggcaat gattttttcg
     5701 gtcaggtaga aagttatctt attgaattac ttaaagataa tgatgattat caacactgta
     5761 ttcaaacaca ctcctttaaa tccgcccgac acgcggcaaa aaggcaaaac ggtataggca
     5821 cgccgtattt tttgcgctat aatcacgcct tacttaattc ggaatgtagc gcagcccggt
     5881 agcgcacttc gttcgggacg aaggggtcgg aggttcgaat cctctcattc cgaccatatt
     5941 caaaccgcct cggcatggat tgctggggcg gtttttccct tttggcgtca acagaaaaat
     6001 gccgtctgaa acagaatgct gtttcagacg gcatttcgtt ttccctaacc ctgccatttg
     6061 cgcgcactgg cacagagtat cggcaaggtt caaaagacca tcggaattta ggaagccgag
     6121 cttgtaccca acggcagcat cttattcagt aaggctccgt cctgattggg cggtggaaat
     6181 gccggcattt ccacgcagaa gcggcacact ttccccgtat gtcaaacatc ggtaaaaccg
     6241 tacgccgtcc ctttgagtta cactgcttaa actactctat tcccgcccat ttgtgcgtct
     6301 gcacgctcaa ctgccaatgc acggatgcgt cggggcgact gtttaaaata ccgatttggc
     6361 ggatggtgtc gtagatgttc atcgcaccgt cttgctcaca gggcgaaagg tagtaatgat
     6421 gcgcgcggat tttgcgttcc atattttcac agaacgcaag gacatcgccg tcggcaacaa
     6481 tccgcacttc gtcggctgtt tcgatacagc ttttttcgta tttggcggca tagcaggctt
     6541 tggggctggt ggcgacatag tcgatttgcg gcggcgcggg attgagtccg ttggtttcga
     6601 tacagaggaa ataaccttcc gccttgagca tgtccagcag catatcgaga tgcggctgga
     6661 tggtcggttc gccgccggtg atgatgatgt tgcgggcggc ataggttttc agacagccta
     6721 agatgtcgga caggctcatc atgccgaatg tcaaataatc ggtatcacac cagccgcagg
     6781 cgaggttgca tttgcccaag cggacgaaaa cggcgggtat gcccgtgttc cagccttcgc
     6841 cttgcaggct ttcaaagatt tcgacgatgc ggtattgggg attttcgggg gcaacattga
     6901 tttttttcat accgccaaca ccgccgccgc tgccaaaaat gcgggcaaac cttgtttgac
     6961 gagtatgcct ttgttgccgg aagagaacgc gccccacgcg gcggcaatca ggacgaagcc
     7021 gagaaacagt accgttgcgc cgtacaccgc gttatccgga gcggcaaacc gcgaccacac
     7081 cagcccgatg ccgagaaagc cgttatacag cccttggttg ccgaacaggg tctgcacgcg
     7141 cttttgttcc ataaattcat aaggcagctt gaatatttcc gccgcttttt cgctgggaat
     7201 ctgcgtcatt tcaagccagg cgatgtagaa atgttcggcg gtgacaagga ggactaagag
     7261 ggtggagaga agtttcatgg gtattccttt taatgggtgt atttgatatg gagggtcgtc
     7321 tgaaaaaacg gggaatccgt acaggagaaa aaaccgtttt acggtaaatt caaataagga
     7381 cgctctaaac cgtcctttcc gcgcaggcgg gaatccaaag atttggaatt gctgcaattt
     7441 ttaaatattc ctgaaaaacc aaggtctgga ttcccgcctg cgcgggaatg acgcggttgg
     7501 gcatgtctta ttggaattta ctatatcgat acgttcaaga tattccctac tccccttcat
     7561 actccgcaca cgatgtcggc gtttcccaca atttgacgcg gcacacgttc agccccgcgt
     7621 ttttcagacg gtcgtacatt tcgaccgcca tattttcggc agtggtgcgg cagggcaggc
     7681 gcagggtttt catgttccag ccttccaaga gtgcggcgat ttgagattcg cggctgttgc
     7741 cgccgtggta gatgaaggcg tggtcgaagg ggtcggtaat gtgttgtttg acaatggctt
     7801 tcaagtcggt aaagtccatc accataccgt ctttcgcgcc gcctttgata atgccgtctg
     7861 aaacggtgat ttcgagtttg taggtatgtc cgtgcaagtt ttggcatttg ccgtcatgcc
     7921 cgtcgagcat atgcgaggag tcgaaggtga agattttggt gattttcatg ggttctcaaa
     7981 tgggcaaata gccttgaaag ccgatttcgg cgggtttgcc gtgcggattc ggggtcaggc
     8041 ggatatggaa attgccgatg cggtcgagcg caagcaggtt gtccacgtct tttaagttgt
     8101 ctttatgttg ctgaacatgg tcggtcaaca gggtttgcag ggctttttgt ttggcttcgg
     8161 caggcgtggc ggcggcgaac agcccgaacg cgtgcgcctc ggcaagctgc cccgcgcgat
     8221 aaccgccgac attggcaaaa tacaggcgcg gggcgtgttc agacggcatt tccgttttgg
     8281 gcgtttcgga tacggcgatg tcgtaaccgt ccgcccattc gacaacctgc cagccgtcga
     8341 tgtggatttt gtccgcatcg ccgaaccacg cggctttgag tgcggggacg gcttcacggt
     8401 agtcgtcgca cacggcaaat tggatgtcgt gcacttcgat attcgacctg ccggcattgc
     8461 cgccgaggta aaacatatgg agcttgggca tatcgtattc cttatggttt gcgcgtgttc
     8521 agacggcctt tttactttcc agatattccg ccagcccgcg ttcgcgcaag atacagctcg
     8581 ggcattcgcg gcagccgccg acgatgccgt tatagcaggt gtgggtttgc tcgcggatat
     8641 agtccagcac gcccatttcg tccgccaacg cccacgtttg cgccttggtc agatacatca
     8701 gcggcgtgtg gatttggaaa tcatagtcca tcgccaaatt aagggtaacg ttcatggatt
     8761 tgacgaacac gtcgcggcag tcaggatagc cggagaagtc ggtttcgcac acgcccgcga
     8821 tgatgtgccg tatcccctgc cctttggcgt aaatcgcggc atagagcagg aaaagcgcgt
     8881 tgcggccgtc tacaaaggta ttcggaacgc cgttttcggc agtttcgatg gcggcggtgt
     8941 cgtccatcag ggcattgtgc gtaatctgcc gcatcaggct caagtcgagt acggtttgtt
     9001 tgacgcccaa atcctgcgca atccagcggg cacgttccag ctcgacggca tggcgttgcc
     9061 cgtattggaa agtaatggct tggacgtttt cgcgcccgta gatttggatt gcctgaatca
     9121 ggcaggtggt cgaatcctga ccgcccgaaa agatgaccaa ggctttttgg tttgacatat
     9181 cgaatcctag ttttggtaac gcgggaggtt tgcgaaccgc gaagttggac agtaaagacg
     9241 cggattatac aggcaaacgc gttcagacgg catctgaacg ccatgccgtc tgaacacgcg
     9301 gcttatgccg acttgatggc gagttccgcc aagcgtttgc tttgtgcgaa ggcgatattg
     9361 ttttcttcgg cggtcaggac gggagccgct gtcgggaata tcttttttga cggcttcgca
     9421 gacggcggag actttgggga cggtgcgcaa tacggcttcg caaccttcaa cgctgtcgat
     9481 gccgcgagcg attcggcggg cgggattgcg ggtgctaccg ttttggaaat agtagaggac
     9541 gaggattttg agggggattt gggttcatgg gcggattccg ttaaaatggt tcggtcttca
     9601 gacggcataa cagttgttcc gatgccgtct gaaacagccg cagttcaggc atttgttcct
     9661 gacggcaaaa ttggctataa catcgggcat caatgcccaa cttactgacc gggcaagaaa
     9721 ttatgacctt tttacaacgt ttgcaaggtt tggcagacaa taaaatctgt gcgtttgcat
     9781 ggttcgtcgt ccgccgcttt gatgaagaac gcgtaccgca ggcggcggca agcatgacgt
     9841 ttacgacgct gctggcactc gtccccgtgc tgaccgtgat ggtggcggtc gcttcgattt
     9901 tccccgtgtt cgaccgctgg tcggattcgt tcgtctcctt cgtcaaccaa accattgtgc
     9961 cgcagggcgc ggacatggtg ttcgactata tcaatgcgtt ccgcgagcag gcgaaccggc
    10021 tgacggcaat cggcagcgtg atgctggtcg ttacctcgct gatgctgatt cggacgatag
    10081 acaatacgtt caaccgcatc tggcgggtca attcccagcg tccgtggatg atgcagtttc
    10141 tcgtctattg ggctttactg acgttcgggc cgctgtcttt gggcgtgggc atttccttta
    10201 tggtcggctc ggtacaggat gccgcgcttg cctcaggtgc gccgcagtgg tcgggcgcgt
    10261 tgcgaacggc ggcgacgctg accttcatga cgcttttgct gtgggggctg taccgcttcg
    10321 tgccaaaccg cttcgttccc gcgcggcagg cgtttgtcgg ggctttggca acagcgttct
    10381 gtctggaaac cgcacgttcc ctcttcactt ggtatatggg caacttcgac ggctaccgct
    10441 cgatttacgg cgcgtttgcc gccgtgccgt tttttctgtt gtggctgaac ctgttgtgga
    10501 cgctggtctt gggcggcgcg gtgctgactt cttcactctc ctactggcgg ggagaagcgt
    10561 tccgcagggg cttcgactcg cgcggacggt tcgacgacgt gttgaaaatc ctgctgcttc
    10621 tggatgcggc gcaaaaaaaa ggcaaagcct tgcctgttca ggagttcaga cggcatatca
    10681 atatgggcta cgacgagttg ggcgagcttt tggaaaagct ggcgcggcac ggctacatct
    10741 attccggcag acagggttgg gtgttgaaaa cgggggcgga ttcgattgag ttgaacgaac
    10801 tcttcaagct cttcgtttac cgtccgttgc ctgtggaaag ggatcatgtg aaccaagctg
    10861 tcgatgcggt aatgacaccg tgtttgcaga ctttgaacat gacgctggcg gagtttgacg
    10921 ctcaggcgaa aaaacagcag caatcttgag tatttttgaa actgtatttt tatcctaaag
    10981 acattttcct atctgctgat tccaccgttt cctttctgtg tgccgccata atttttatga
    11041 tagacaagcc attcaagttt gcattgactg ctttttcatt ggcaatatcc aaatggctgg
    11101 tcgctgcatc taaaaatagg attttcggtt cgcaatataa ggcccgcgcc aatacgatgc
    11161 gttgtttttg tccgcctgac agtgcgctgc ccatatcgcc gatcaaggtt tcatagccca
    11221 taggcatggc gcagatttct tcgtgaatca tagcaaggca ggcgcaatgt tcgatttttc
    11281 ctctatccgg ttccgtatcg aaaaaacaag gggctgtact agattagccc taaatcccac
    11341 accaatcccg caggatttta agctgttgag acggtgtgcc gaagttaaat cgaaattcgc
    11401 attctttcaa gaacagcggg aaagatttgc aatcgattcc gttgtatttt cgcaagacac
    11461 gtttagtcta gagtctgtat attacattta tttttagggt ctgctagcca atttcttgtt
    11521 cccttcatta ttttatcttc tgaaagaaaa ttattttttt ccatgctatt aatattaatg
    11581 atatgatttt tatttaaaat aatttttcca tataaaattt ccggtttgta atagcaagag
    11641 tctgaagcaa atccttgccc gtcaatataa gaaaaataaa tgttatcatc ctccttataa
    11701 tattctaaaa ccaatccgga tattatttta tcaaaattcc cttcagttcc atctttcatg
    11761 actaaaatat aattagcagg ccaaccttta tcgtaaacat attcaaactg atagttcccg
    11821 aaactctcga tatccgaact aaaaaagaag aaaagcaaat taatagccaa tacaaaaaca
    11881 aataagaaca aaaatagcaa aattttcaac ttagttaaca atatttacct ctcctttaaa
    11941 ttcaatcctg aaaggtaccc cttaccctgg gctaccaatt atagtttcca tatttctaaa
    12001 tattgttttt acattacttt tttctccccc caaaggaatt cattttaaaa tcatgctttt
    12061 caggtgctaa tcgatactta ccattaacat ctttaatcac agatatattt ccatgtatag
    12121 cccaacgtga aaaatctgag tattatatac agttatacct tactgaaaca aagctagctg
    12181 tacatatctg taccatattt ttactacaaa caaaaaatat ttataattat taaggataag
    12241 ataaaaaccc ccaacgccag attaattctt aataatttca aataaaaaat atttgagatt
    12301 ttttcttttc caaataatat attgaaatat ttaaagttaa ggtagcttga tttaagtaga
    12361 aaatcaaaaa aaccattaat taatttttct tctttaaata ttttatatga tattataaaa
    12421 ttaaataaca ttgcgaaaac atatgaaatc atcaaaatac caaatatata gtgggaatgc
    12481 attattattt agctccttct tttggctctg acaaattgac agtccattga tatccaatgc
    12541 ttgcatttgc aattgctgac gcacctgccc ctgttttccc tgttagtatc aatggttctt
    12601 ttcttgcaag atgtgcacct gcacaaccac ctaatactaa accaccacct attgt
//
LOCUS       DAWGKF010000052        12249 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.052, whole genome shotgun sequence.
ACCESSION   DAWGKF010000052 DAWGKF010000000
VERSION     DAWGKF010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12249)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12249)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12249
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.052"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            23..259
                     /locus_tag="WHR07_000991"
     CDS             23..259
                     /locus_tag="WHR07_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin"
                     /protein_id="HEZ2130217.1"
                     /translation="MWIFSACSRGADPIGRPFAFVNILENLEIRSTLPLIANRPTFPQ
                     LWVNGELIGGSDIILQMYQSGELKPLIEEHSPKV"
     gene            427..2202
                     /gene="ggt"
                     /locus_tag="WHR07_000992"
     CDS             427..2202
                     /gene="ggt"
                     /locus_tag="WHR07_000992"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEZ2130218.1"
                     /translation="MAKTYLLTALIMSMTISGCQVIHANQGKVNTHSAVITGADAHTP
                     EHATGLTEQKQVIASDFMVASANPLATQAGYDILKQGGSAADAMVAVQTTLSLVEPQS
                     SGLGGGAFVLYWDNTAKTLTTFDGRETAPMRATPELFLDKDGQPLKFMEAVVGGRSVG
                     TPAIPKLMETIHQRYGVLPWGKLFDTPIRLAKQGFEVSPRLAISVEQNQQHLARYPKT
                     AAYFLPNGVPLQAGSLLKNLEFADSVQALAAQGAKALHTGKYAQNIVSVVQNAKDNPG
                     QLSLQDLSDYQVVERPPVCVTYRIYEVCGMGAPSSGGIAVGQILGILNEFSPNQVGYD
                     AEGLRLLGDASRLAFADRDVYLGDPDFVPVPIRQLISKDYLKHRSRLLEQSDKALPSV
                     SAGDFIHEWVSSQAIELPSTSHISIVDKAGNVLSMTTSIENAFGSTLMANGYLLNNEL
                     TDFSFEPIKQGKQVANRVEPGKRPRSSMAPTIVFKAGKPYMAIGSPGGSRIIGYVAKT
                     IVAHSDWNMDIQDAISAPNLLNRFGSYELETGTTALQWQQALNDLGYKTDVRELNSGV
                     QAIIIEPSRLVGGADPRREGRVMGD"
     gene            2421..2616
                     /locus_tag="WHR07_000993"
                     /pseudo
     CDS             2421..2616
                     /locus_tag="WHR07_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221594.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2683..3933
                     /locus_tag="WHR07_000994"
     CDS             2683..3933
                     /locus_tag="WHR07_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEZ2130219.1"
                     /translation="MFSKSVTLAQYDPDLAAAIAQEDQRQQDHVELIASENYVSCAVM
                     EAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRVKKLFGAQYANVQPHSGSQAN
                     QAVYASVLKPGDTILGMSLAHGGHLTHGASVNISGKLYNAVTYGLDENEVLDYAEVER
                     LALEHKPKMIVAGASAYALQIDWAKFREIADKVGAYLFVDMAHYAGLIAGGEYPNPVP
                     FCDFVTTTTHKTLRGPRGGVILCRDNTHEKALNSSIFPSLQGGPLMHVIAAKAVAFKE
                     ALQPEFKQYAKQVKINAAAMAEELVKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAA
                     LGKAHITVNKNAIPNDPEKPFVTSGIRIGSAAMTTRGFNEADARVLANLVADVLSNPE
                     DEANLENVRKQITALCDKYPVYGA"
     gene            4024..4668
                     /locus_tag="WHR07_000995"
     CDS             4024..4668
                     /locus_tag="WHR07_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEZ2130220.1"
                     /translation="MLASAIDFILHIDQHLLALSAQYGVWIYAILFLIVFCETGLIVT
                     PLLPGDSLLFAAGGIAALGGMDIHLMVALLSLAAILGDALNFTVGKYFGGRLFANPDS
                     KIFRREYLDKTHRFYEKHGGKTIIIARFMPIVRTFAPFVAGMGKMHYAKFIRYNIIGG
                     LLWVILFSYAGYFFANFPVVKNNLGLVMGGIIIVSVLPGAVEIARAKLAVKSKR"
     gene            4687..6597
                     /locus_tag="WHR07_000996"
     CDS             4687..6597
                     /locus_tag="WHR07_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ2130221.1"
                     /translation="MNILSVENASFAIGHVALLDKTSFQLDSGEKVGLIGRNGAGKSS
                     FLKILAGVQKLDDGQIIIQNNLKIVYVPQESFFDKDATVFDTVAEGLGEIRDLLRRYH
                     RVGHELENGSGEALLKELNELQLEIEAKDGWKLDAAVKQTLGELGLPENEKIGNLSGG
                     QKKRVALAQAWVQKPDVLLLDEPTNHLDIDAIIWLENLLKAFEGSLVVITHDRRFLDN
                     IATRIVELDRGILRSYPGSFSKYSEKKVQELAVEAEHNRLFDKFHAQEEAWIRKGIEA
                     RRTRNEGRVRRLEELRRQRAERRNVQGQVNFKLDSGEKSGKIIAELEHASFAYGDKVI
                     MDKFSAILQRGDKIGLIGPNGIGKTTFLKLILGELNPTYGRIRIGSKQEVAYFDQFRS
                     TLNENDTVFYTLGQGNDYVEVGGKKKHIMSYLEDFLFHPARAQSPVSSLSGGERNRLL
                     LAKLFTRPANILILDEPTNDLDIDTQELLEDLLRDYQGTVFLVSHDRMFLDNVITQSI
                     IFEGNGRLKEYIGGYQDYIDAKSREAKIQTESAPKTADAEPVKEKPKANRTVKLSYKE
                     QRELDALPDEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERW
                     ELLETKQNGNAV"
     gene            6618..6983
                     /locus_tag="WHR07_000997"
     CDS             6618..6983
                     /locus_tag="WHR07_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130222.1"
                     /translation="MFKRPEEIIVLILAVLWIAGTYFLAALFGADAYTVLKITALTLL
                     WSAASFLLWQKNLSRHIWPLLLGCLTACWWPYLNQSVAPGSLPWYASWTFKTILALIP
                     VTAGYLFKWKQYRQRKTKP"
     gene            7094..8569
                     /locus_tag="WHR07_000998"
     CDS             7094..8569
                     /locus_tag="WHR07_000998"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HEZ2130223.1"
                     /translation="MISKQEYQAQAAQGYNRIPLVQELLADLDTPLSLYLKLANRPYT
                     YLLESVVGGERFGRYSFIGLPCSHYLKASGKHVDVYQNGEIVEQHDGNPLPFIEAFHN
                     RFKTPEIPSLPRFTGGLVGYFGYETIYNFEHFAHRLKNTTKADPLGTPDILLMLSQEL
                     AVVDNLSGKIYLIVYADPSQPDGYERARERLEDIRTQLRQSCAIPLSLGSKHTEAVSE
                     FGEEPFKACVNKIKDYIFAGDCMQVVPSQRMSMEFTDSSLALYRALRTLNPSPYLFYY
                     DFGDFHIVGSSPEILVRRERDDVIVRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEH
                     VMLIDLGRNDVGRISKTGEVKVTDKMVIEKYSHVMHIVSNVEGRLKDGMTNMDILAAT
                     FPAGTLSGAPKVRAMEIIEEVEPSKRGIYGGAVGVWGFNNDMDLAIAIRTAVVKNNTL
                     YVQSGAGVVADSDPASEWQETQNKARAVIHAAQMVQEGLDK"
     gene            8566..9111
                     /locus_tag="WHR07_000999"
     CDS             8566..9111
                     /locus_tag="WHR07_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1643 domain-containing protein"
                     /protein_id="HEZ2130224.1"
                     /translation="MTYEKLYELRQTLRPTTKDGLYTDNEKSREILTVRWSGNTENPK
                     NFSAVAIGINPSKANDERSDKTLTQLARFLDMYGFTNFKMLNIFSSYSTQQTGIRANT
                     QTDFSKFKGCLEDADMIILAWGTDRGAYKDEKNRILEFLKAEKFMEKVFCISETGNSS
                     DTRHPSRISYSYQLVQFEESA"
     gene            9108..10244
                     /locus_tag="WHR07_001000"
     CDS             9108..10244
                     /locus_tag="WHR07_001000"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HEZ2130225.1"
                     /translation="MKNISLSPPAMLGILGGGQLGRMFTVAAKTMGYKVTVLDPDPDA
                     PAAEFADCHLCAPFNDQAALDELAKCAAVTTEFENVNADAMRFLAKHTNVSPGSDCVA
                     IAQNRIQEKAWIRKAGLQTAPYQAICKAEDITEESIQFLPGILKTATLGYDGKGQIRV
                     KTLDELKAAFAEHGGVDCVLEKMVDLRSEISVIVCRLNNDNVQTFDPAENIHENGILA
                     YSIVPARLSADVQQQARQMAQRLADELDYVGVLAVEMFVVGDTHELVVNEIAPRPHNS
                     GHHTIDACAADQFQQQVRIMCNLPPADTKLLSSCCMANILGDVWQEDGGEPDWLPLQS
                     HPNAHLHLYGKKTAHKGRKMGHFTVLTTDSDTAFQEAKKLHQSL"
     gene            10291..10773
                     /locus_tag="WHR07_001001"
     CDS             10291..10773
                     /locus_tag="WHR07_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ2130226.1"
                     /translation="MSLLTLLRPATVQDCKDIFKVHLHSVQYTCILSYNEHALKVWEG
                     LLNTESYLPTISDPDKALWVAEYKGNIQGFFQIDCQEAQLDALYVHPLFHNLGLGTAL
                     LHQAETIAHKSGLSFLKLYASLNSVPFYLLNRYESLGSAVLQLDPSIKIKCELMRKHL
                     "
     gene            10879..11934
                     /locus_tag="WHR07_001002"
     CDS             10879..11934
                     /locus_tag="WHR07_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ2130227.1"
                     /translation="MKTYAPALYTAALLTACSPAADSNHPSGQNAPANTESDGKNITL
                     LNASYDVARDFYKEYNPLFIKTYQSEHPGTSVSIQQSHGGSSKQALSVANGLQADVVT
                     MNQSSDIDLLEKKGLVEKGWQQALPDHAAPYTSTMVFLVRKNNPKQIRDWNDLAKDGV
                     NIVIANPKTSGNGRYAFLGAYGYGLKTTNGNEQEAQKLVASILKNTPVFENGGRAATT
                     TFTQRNIGDVLITFENEANYVSKKLTQGQFEIVYPSYTISAESPVAVVNSVVAKKGTQ
                     KTARAYLEYLWSEPAQELAASLYLRPRNPEVLARHKADFPDLDSFSPEEKFGGWDNIM
                     KTYFADGGIFDRLTAQK"
     gene            11931..12143
                     /locus_tag="WHR07_001003"
     CDS             11931..12143
                     /locus_tag="WHR07_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130228.1"
                     /translation="MTAMPSEPPFRRHSTHQNRKTAPKIIITRHNGKPDTKPNTAAKM
                     PSEAVGATILIWGALQGRITFLNHPF"
BASE COUNT         3380 a         3338 c         2792 g         2739 t
ORIGIN      
        1 aaggcacgcc ccagtttccc caatgtggat tttcagcgcg tgcagtagag gtgctgaccc
       61 aattggcaga ccctttgctt ttgttaatat cctagaaaac ctagaaattc gcagtactct
      121 accactcatc gccaatcggc caacctttcc acagctttgg gttaatggtg agttaatcgg
      181 tggtagtgat attatcctac aaatgtacca atcaggtgag ctaaaaccac tcattgaaga
      241 gcatagccca aaggtctgat tacttaatat cttaaaataa atatcaaaaa agactgctga
      301 tgacattagc ggtctttttt tgatggtcaa gattgatagt ttggattgaa ttatttagcc
      361 atattaaata caataatcag catgccttgt atgaatcatc aatcaaactc aggcgaagga
      421 gtgcttgtgg ctaaaacata tttattgact gcattgataa tgtctatgac aatctctgga
      481 tgtcaagtca tccatgccaa tcaaggtaag gttaatactc attctgctgt catcacaggt
      541 gcagacgctc acacgcctga acatgcaacg ggactgaccg aacaaaagca ggtgattgca
      601 agtgatttta tggtagcgtc agccaatcca ttagcaacac aagctggcta tgatatctta
      661 aagcaaggcg gtagcgctgc agatgcgatg gtggcggtgc agacgacact aagcttggta
      721 gagccacagt cgtcaggctt gggcggtggt gcatttgtgt tgtattggga taataccgcc
      781 aaaacattga ccacatttga tgggcgtgag acggcaccga tgcgtgcgac gccggaatta
      841 tttttggata aagatggtca accattgaaa tttatggaag cggtggtcgg tggtcgctcg
      901 gtgggtacgc ctgctatccc taaactgatg gagacgatac atcagcgata cggtgtattg
      961 ccttggggaa aattatttga tacgccgatc cgcttggcaa aacaaggctt tgaggtgtcg
     1021 ccaaggcttg ccatctcggt tgagcaaaat cagcagcatt tggcacgcta tccaaaaaca
     1081 gccgcttatt ttttgccgaa tggtgtgccg ctacaagcag gcagcttgct gaaaaattta
     1141 gaatttgctg acagtgttca ggcgttagca gctcaaggtg caaaagctct gcatactggt
     1201 aaatatgccc aaaatatcgt ttcagttgtc caaaatgcta aggataaccc cggtcaatta
     1261 tccttacaag atttatctga ttatcaagtg gtggaacgcc cgcctgtttg tgtgacttat
     1321 cgtatttatg aagtatgcgg tatgggtgca ccaagctcag gtgggattgc tgtgggtcag
     1381 attttgggga ttttaaatga attttcaccc aatcaggtgg ggtatgatgc tgaaggttta
     1441 cgtctcttgg gcgacgcttc taggcttgcg tttgcggatc gtgatgtata tttgggcgac
     1501 cctgattttg taccagtacc cattcgccag ttgatttcta aagactacct aaaacatcgc
     1561 agccggctgc ttgagcagtc ggataaggca ttgcctagcg tatctgcagg cgattttatt
     1621 catgagtggg tgtcctcaca agcgattgag ttaccttcta ccagtcatat atcaattgtg
     1681 gataaggcgg gcaatgtgct atcaatgacg acttccattg aaaatgcgtt tggctcaact
     1741 ttgatggcaa atggctacct gctgaataat gagctgacag actttagttt tgagccaata
     1801 aagcagggca aacaggtcgc caatcgtgtc gagcccggca agagaccacg ctcctcaatg
     1861 gcaccaacca tcgtatttaa agcaggcaag ccttatatgg caatcggctc cccaggtggt
     1921 agccgtatca ttggctatgt cgctaagacg attgtggcac atagtgactg gaatatggat
     1981 atccaagatg ccatcagtgc acccaattta ttaaatcgct ttggtagcta tgaactagaa
     2041 acgggtacaa ccgccctcca gtggcaacaa gcattaaatg atttgggcta taagactgac
     2101 gtgcgtgagc taaattcagg tgttcaagcc attattatcg agccaagcag gctggttggt
     2161 ggtgccgatc cacgccgaga aggtcgagtg atgggtgatt agaggtgaag cttgtatttt
     2221 gtgaatttga ccgcattaag ttaatattaa aataggggga aattgtgagt aatcaaacaa
     2281 aaatacaagc catcaagcaa gcttctgagc agatcttcgc aatttgtgag acgccaaaca
     2341 cagcattaca agccattcat ctgattttaa gacatggtgg ggcaggagag ttgtcttggc
     2401 aagtggtgta tcagcgggtt atggctgata aagatgtggt tggtgctggt tatttgattg
     2461 attttgcaca aactgccgaa aatttaccat ttgatgcatt gcctttgggt agccttgtac
     2521 taacataaag gtaatgagac gctaaaaacc agcatgttaa ataaattacc tgataatgcc
     2581 aaagaaaatt tacgcattat ggactatctg ccttaggttt tgaagtattt ttttatacaa
     2641 aaaacactca tgataccctg attacacaaa ggagccgaga acatgttttc aaaaagcgtt
     2701 accctcgcac aatatgaccc cgatttggca gcagccattg cccaagaaga ccaacgccag
     2761 caagaccacg tcgagctgat tgcctctgaa aactacgtca gctgcgccgt aatggaagcg
     2821 caaggttccc agctgaccaa caaatacgcc gaaggctacc ccggcaaacg ctactacggc
     2881 ggctgcgaat acgtcgatat tgtcgaacaa ttggcaatcg accgcgtcaa aaaactgttc
     2941 ggcgcgcaat acgccaacgt tcaaccgcac tccggctcgc aagccaacca agccgtgtac
     3001 gcttccgttt taaaaccggg cgacaccatt ttgggtatgt ctttggcgca cggcggccac
     3061 ctgacccacg gcgcgagcgt taatatttcc ggcaaactct acaatgccgt tacttatggt
     3121 ttggatgaaa acgaagtgct cgattatgcc gaagtggaac gcttggctct cgaacacaaa
     3181 cccaaaatga ttgtggcggg tgcgtctgcc tacgcgttgc aaatcgactg ggcaaaattc
     3241 cgcgaaatcg ccgataaagt cggcgcatac ctctttgtcg acatggcgca ctacgccgga
     3301 ctgattgccg gtggcgaata tcccaacccc gtgccattct gcgacttcgt gaccaccacc
     3361 acccacaaaa ccctgcgcgg ccctcgcggc ggcgtgattc tgtgccgcga caatacccac
     3421 gaaaaagcac tgaactcttc catcttccca agcctgcaag gcggtccgct gatgcacgtc
     3481 atcgccgcca aagccgtagc gtttaaagaa gcgttgcaac ccgagttcaa acaatacgca
     3541 aaacaagtga aaatcaatgc tgccgccatg gcggaagaac tggtcaaacg cggtttgcgc
     3601 atcgtttccg gccgcaccga aagccacgtt ttcctcgtcg acctgcaacc gatgaaaatc
     3661 accggcaaag ccgccgaagc cgctttgggc aaagcgcaca tcaccgtcaa caaaaacgcc
     3721 attccgaacg atccggaaaa acccttcgtt acctccggca tccgcatcgg ctccgccgcc
     3781 atgaccacac gcggttttaa cgaagccgac gcacgcgtat tggcgaactt ggttgccgac
     3841 gtattgtcta accccgaaga cgaagcgaat ctggaaaacg tccgcaaaca gattaccgcc
     3901 ctctgcgaca aataccccgt ttacggcgcg taaacttttt taaaaacaaa tgccgtctga
     3961 aaatttcaga cggcattttt ccaatcggtt aaaatacgcg gtttgttttt ttaggaacgc
     4021 gccgtgcttg cctccgccat cgacttcatc ctccatatcg accaacacct gctcgcgctg
     4081 tcggcgcaat acggtgtgtg gatttatgcg attctgtttt tgattgtttt ttgcgaaacc
     4141 ggcctgattg ttacgccctt actgcccggc gattcgctgc tgtttgccgc cggcgggatt
     4201 gccgcgctgg gcggtatgga tattcatttg atggttgcat tattaagcct tgccgccata
     4261 ctcggcgacg cgctcaattt taccgtcggc aaatatttcg gcggcaggct gttcgccaac
     4321 cccgattcta aaatcttccg acgtgaatat ctcgataaaa cccaccgttt ttacgaaaaa
     4381 cacggcggca aaaccatcat cattgcccgt tttatgccca tcgtccgcac ctttgccccc
     4441 ttcgtcgccg gtatggggaa aatgcactat gccaaattta tccgctacaa catcatcggt
     4501 ggcttgttgt gggttatcct gttttcttac gcgggctatt tctttgccaa cttccccgtc
     4561 gtaaaaaaca atctgggctt ggtgatgggc ggcatcatta ttgtttccgt cctgccgggt
     4621 gcggttgaaa ttgcccgcgc caaacttgcg gtaaaatcca aacggtaact gttgagaatt
     4681 tgcatcatga atatattatc tgtagaaaac gcttcttttg ccatcggcca cgttgccttg
     4741 ctcgacaaaa cttcttttca actcgacagc ggcgaaaaag tcggcttgat cggacgcaac
     4801 ggcgcaggta agtcttcgtt tctgaaaatc ctcgccggcg tgcaaaagct cgacgacggg
     4861 cagattatca ttcaaaacaa cctcaaaatc gtttatgtac cgcaggaatc cttttttgat
     4921 aaggacgcaa ccgtatttga taccgttgcc gaaggtttgg gtgaaattcg cgatttattg
     4981 cgccgttacc accgcgtcgg ccatgagttg gaaaacggtt cgggtgaggc tttgttgaaa
     5041 gaactcaacg aattacaact tgaaatcgaa gcgaaggacg gctggaagct ggatgcggca
     5101 gtcaagcaga ctttggggga actcggtttg ccggaaaacg aaaaaatcgg caacctttcc
     5161 ggcggtcaga aaaagcgtgt cgccttggcg caggcttggg tgcagaagcc cgacgtattg
     5221 ctgctggacg aaccgaccaa ccatttggat atcgacgcga ttatttggct ggaaaatctg
     5281 ctcaaagcgt ttgaaggcag cttggttgtg attacccacg accgccgttt tttggacaat
     5341 atcgccacgc ggattgtcga actcgatcgc ggtattttgc gttcctatcc cggctcgttc
     5401 tccaaataca gcgaaaaaaa agtgcaggaa ttggcggttg aagcggaaca caaccgcctg
     5461 tttgacaaat tccacgcgca ggaagaagcg tggatacgca aaggcatcga agcgcgccgc
     5521 acccgcaacg aaggccgcgt gcgccgtttg gaagagctgc gccgccaacg cgccgaacgc
     5581 cgcaatgtgc agggacaggt caacttcaag ctcgacagcg gcgagaaaag cggcaaaatc
     5641 atcgccgaat tggaacatgc ctcgtttgcc tatggcgaca aagtcattat ggacaaattc
     5701 tccgcgattt tgcagcgcgg cgataaaatc ggtctaatcg gccccaacgg catcggcaaa
     5761 accacatttt taaaactgat tttaggcgaa ctcaacccga cttacggcag aatccgtatc
     5821 ggcagtaagc aggaagttgc ctatttcgac caattccgca gcacgttgaa cgaaaacgac
     5881 accgtgtttt acacgctcgg tcaaggcaac gattacgtcg aagtcggcgg caagaaaaaa
     5941 cacataatga gctatctgga agatttctta ttccatccag cccgcgcaca aagtcccgtt
     6001 tcatcgctct ccggcggcga acgcaaccgc cttttgctgg caaaactctt tacccgtcct
     6061 gctaatattt tgattttgga cgaaccgacc aacgacttgg atatcgatac ccaagagctg
     6121 cttgaagatt tgctgcgcga ttatcaaggc acggtattcc ttgtctcaca cgaccgtatg
     6181 ttcctcgata acgtgattac ccaaagcatt atttttgaag gaaatggaag gttaaaagaa
     6241 tatatcggcg gctatcagga ctacatcgac gcaaaatcac gcgaagcgaa gattcagacg
     6301 gaatccgcac ccaaaacagc cgatgccgaa ccggtgaaag aaaaacccaa agccaaccgc
     6361 acggtcaaac tgtcctacaa agaacagcgc gaactcgacg ccctgcccga cgaaatcgcc
     6421 gccttggaag ccgaacaggc agaaatcaac gcgcagcttt ccgatcccga aatcttcaaa
     6481 gattacgaaa aagccggcgc actgcaaagc cgcgccgaag aaatcgaaat gctgcttttg
     6541 gaaaagctgg aacgctggga gctgctggaa accaaacaga acggcaatgc cgtctgaaat
     6601 caaacaggaa gaaaaaaatg ttcaaacgac ctgaagaaat cattgtcctg atacttgccg
     6661 tcctctggat tgccggtacg tattttctcg ccgccctgtt tggagcggat gcttataccg
     6721 tgttaaaaat cactgccctt accctgcttt ggtctgccgc atcattcctc ctttggcaaa
     6781 aaaacctcag ccggcatatc tggccgctgc tgctcggctg cctgactgcc tgttggtggc
     6841 cgtatctgaa tcaatcggtc gcacccggtt ctttaccttg gtatgcatca tggacgttca
     6901 aaaccatctt agccctgatt cccgtaaccg caggttatct gtttaaatgg aaacaatacc
     6961 ggcagcgcaa aacaaagccg taagcccgtc cttttcagac ggcatctccg gtcagactgt
     7021 caacaattcc gataaaatgc tatactcgcg cccgttgccg cgccgtccga aaccgccctt
     7081 tgggaaagca gaaatgatca gcaaacaaga ataccaagcc caagccgctc aaggctacaa
     7141 ccgcatcccg ctcgtgcaag aactccttgc cgatttggat acgccgcttt ccctctatct
     7201 caaactcgcc aaccgcccct atacctacct gctcgaatcc gttgtcggtg gcgaacgttt
     7261 cggccgctat tcttttatcg gcctgccttg cagccactat ctcaaagcca gcggcaaaca
     7321 cgtcgatgtt tatcaaaacg gcgaaattgt cgagcaacac gacggcaacc ccctgccctt
     7381 tatcgaagcc ttccacaacc gcttcaaaac acccgaaatc ccaagcctgc cgcgctttac
     7441 cggcggactg gtcggctact tcggttacga aaccatctac aattttgaac acttcgccca
     7501 ccgcctgaaa aacaccacca aagccgaccc gctcggcacg cccgacatcc tcctgatgct
     7561 ctcgcaagag cttgcagtag tggataacct aagcggtaaa atctacctga ttgtttacgc
     7621 cgatccgtcg cagcccgacg gctacgaacg cgcacgcgaa cgcctcgaag acatccgtac
     7681 acagttacgc caaagttgcg ccatcccgct ttcgctcggc agcaaacaca ccgaagccgt
     7741 cagcgaattc ggcgaagagc cgttcaaagc ctgcgttaac aaaatcaaag actacatctt
     7801 tgcaggcgac tgcatgcagg ttgtccccag ccagcgcatg agcatggaat tcaccgacag
     7861 ctcgctcgcc ctctaccgcg ccttgcgcac gctcaaccct tcgccttatc tcttctacta
     7921 cgatttcggc gatttccaca tcgtcggctc ctcgcccgaa atcctcgtcc gccgcgaacg
     7981 cgacgatgtc atcgtccgcc ccatcgccgg cacgcgcctg cgcggcaaaa cccccgccga
     8041 agaccttgcc aacgaacaag atttgttaag cgatgccaaa gaaatcgccg aacacgtcat
     8101 gttgattgac ttaggacgca acgacgtcgg ccgcatcagt aaaaccggcg aagtcaaagt
     8161 taccgacaaa atggtgattg aaaaatactc ccatgtaatg cacatcgttt ccaacgtcga
     8221 aggccgtctg aaagacggca tgaccaacat ggacatcctc gccgctacct tccctgccgg
     8281 cacactctcc ggcgcaccca aagtccgcgc catggaaatc atcgaagaag tcgaaccgag
     8341 caaacgcggc atctacggcg gtgccgtcgg cgtatggggt ttcaacaacg acatggattt
     8401 ggcaatcgcc atccgcaccg ccgtagtaaa aaacaacacg ctatacgtcc aaagcggcgc
     8461 gggcgtggtt gccgactccg atccggcctc cgaatggcag gaaacacaaa acaaagcccg
     8521 agccgtcata cacgccgcgc agatggtgca ggaagggttg gataaatgac ttatgaaaaa
     8581 ctttatgagc ttcgccaaac actcagaccg actaccaaag acggtctcta tacagataat
     8641 gaaaaaagtc gagaaatcct aacggttaga tggagcggca acacagaaaa tcctaaaaat
     8701 ttctcagctg ttgctatagg aattaatcca agtaaagcaa atgatgaaag aagcgacaaa
     8761 acccttaccc aacttgcacg tttcttggat atgtacggtt ttaccaactt caaaatgtta
     8821 aatatttttt ccagttactc tacacagcaa acaggaatta gggcaaacac ccaaaccgat
     8881 ttttccaaat ttaaaggatg tttggaagat gctgatatga ttattcttgc atggggtaca
     8941 gaccgcggtg cttataagga tgaaaaaaac agaatactgg aatttctaaa agcagaaaaa
     9001 tttatggaaa aagtattctg tatttctgaa actggtaatt ccagcgatac aagacatccg
     9061 tcaagaatta gttatagcta tcaacttgta caatttgaag agtcagcatg aaaaacatat
     9121 ctctttctcc gcccgccatg cttggcatcc tcggcggcgg acaattaggc agaatgttta
     9181 ccgttgccgc caaaaccatg ggctacaaag taaccgttct cgaccccgat ccggacgcgc
     9241 cggcagcaga atttgccgac tgtcatttat gcgcgccgtt taacgaccaa gctgctttgg
     9301 acgaattggc aaaatgcgcg gcggtgacca ctgaatttga aaacgtcaat gccgatgcga
     9361 tgcgttttct cgccaaacac accaatgttt cccccggcag cgactgcgtt gccatcgcgc
     9421 aaaaccgcat tcaggaaaag gcatggatac gcaaagcagg attgcaaacc gcgccgtatc
     9481 aagcaatttg caaagccgaa gacatcactg aagaaagcat acaatttctg cccggcatcc
     9541 tgaaaacggc tacgttgggc tacgacggca aaggtcaaat ccgcgtaaaa acattggatg
     9601 aactcaaagc cgcgtttgcc gaacacggcg gcgtggattg cgttttggaa aaaatggtgg
     9661 atttgcgcag tgaaatttcc gtaatcgtat gccgtttgaa caatgacaac gtgcaaactt
     9721 tcgaccctgc cgaaaacatc cacgaaaacg gcatcttggc ttattccatc gtccccgcgc
     9781 gactgagtgc cgacgtgcag caacaggcgc ggcagatggc gcaacgcttg gcggacgaat
     9841 tggattatgt cggcgtattg gcggtagaaa tgtttgttgt cggtgacacg catgaattgg
     9901 tcgtcaacga aatcgccccg cgcccgcaca attccggaca ccatacgata gatgcctgcg
     9961 cagcagacca gttccagcag caggtacgca ttatgtgcaa cctgccgcct gccgatacca
    10021 aattactgag ttcttgctgt atggcaaata ttttgggcga cgtttggcag gaagacggcg
    10081 gcgaaccgga ttggctgccc ttgcaaagcc atccgaatgc acacctgcac ctttacggca
    10141 aaaaaaccgc gcacaaaggg cggaaaatgg gacactttac cgttttaacc accgattcgg
    10201 acaccgcatt tcaagaagca aaaaaactgc atcagtccct ataatccgac caacggcaca
    10261 gatgccgtct gaagccgccg acataccgcc atgagcctgc tgacactgtt acgccccgcc
    10321 accgtgcaag actgcaaaga catcttcaaa gtccacctgc actccgtcca atacacctgc
    10381 atcctcagct acaacgaaca cgccctaaaa gtatgggaag gcttgctaaa cacagaaagc
    10441 tacctgccga ccatttccga tcccgacaaa gcactttggg ttgccgaata caaaggcaac
    10501 atacagggat ttttccaaat cgactgccaa gaagcacaac tcgatgcact ttacgtccac
    10561 cccctgttcc acaacctcgg actgggcact gccctacttc atcaggcgga aaccatcgcc
    10621 cacaaatccg gtttgagctt tctgaaactc tacgcatcgc tcaactccgt cccgttttac
    10681 cttctcaacc gctacgaatc gctcggttcg gcagtattgc agcttgaccc cagcatcaaa
    10741 atcaaatgcg aactgatgcg gaaacacctc tgatccgtcc ttataaccaa aactgataat
    10801 cttcaaatca aacattattt ccacaagcgc agacagccgt ataaagttgc cccatctacc
    10861 aaccgacagg acaagcatat gaaaacctac gcaccggcac tctataccgc agccctgctc
    10921 accgcctgca gccccgcagc cgattcaaat catccgtccg gacaaaatgc cccggccaat
    10981 accgaatccg acggaaaaaa cattaccctg ctcaacgcct catacgatgt ggcacgggat
    11041 ttttacaaag aatacaaccc cttatttatc aaaacatacc aatccgaaca ccccggcaca
    11101 tccgtcagca tccaacagtc ccacggcggc tccagcaaac aggcattatc cgtagccaac
    11161 ggccttcaag ccgatgtcgt aaccatgaac caatcctccg acatcgacct gctcgaaaaa
    11221 aaaggactgg tagaaaaagg ctggcaacaa gccctccccg accacgccgc gccctacacc
    11281 agcactatgg ttttccttgt ccgaaaaaac aaccccaaac agatccgcga ttggaacgac
    11341 cttgccaaag acggcgttaa catcgtcatc gccaatccca aaacctcggg caacggacgc
    11401 tacgccttcc tcggcgcata cggttacggt ctgaaaacca ccaacggcaa cgaacaggaa
    11461 gcccaaaaac tcgtcgcatc catcctcaaa aacacccccg tttttgaaaa cggcggacgc
    11521 gccgccacca ccaccttcac acaacgcaac atcggcgacg tactcattac ttttgaaaac
    11581 gaagccaact acgtcagcaa aaaactgacc caaggacagt ttgaaatcgt ctatccgagc
    11641 tacaccattt ccgccgaaag ccccgtcgcc gtcgtcaaca gcgtcgtcgc gaaaaaaggc
    11701 acgcaaaaaa ccgcccgcgc ctatctcgaa tacctttgga gcgaaccggc gcaagaactc
    11761 gccgcctcac tctacctgcg cccccgcaac cccgaagtat tggcaagaca caaagccgac
    11821 ttcccagact tagactcatt ctctcccgaa gaaaaattcg gcggatggga caacatcatg
    11881 aaaacctact tcgccgacgg cggcatattc gaccgcctga ccgcacaaaa atgaccgcta
    11941 tgccgtctga accgcctttc agacggcatt ccacacatca aaacagaaaa accgcgccca
    12001 aaatcatcat cacaagacac aacggcaaac cggatacaaa acccaacacc gccgccaaaa
    12061 tgccgtctga agccgtcggc gcaaccatcc ttatctgggg cgcgcttcag gggcgcataa
    12121 ctttccttaa ccatcccttt tgacagccaa ataaacagtg cttttgcctg tcagaaacaa
    12181 aaccaatatt ttgcagttcg tatcggaaca tttatagtgg attaacaaaa accagtacag
    12241 cgttctcgc
//
LOCUS       DAWGKF010000053        12143 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.053, whole genome shotgun sequence.
ACCESSION   DAWGKF010000053 DAWGKF010000000
VERSION     DAWGKF010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12143)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12143)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12143
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.053"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(486..1421)
                     /locus_tag="WHR07_001004"
     CDS             complement(486..1421)
                     /locus_tag="WHR07_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 49 family protein"
                     /protein_id="HEZ2130229.1"
                     /translation="MGHNMMTTQKWYEHITNVIIGNTANFNSGCPESIDYVDERKGVP
                     LAAMKYILMYTEAAASHAYLFEHDLKKFKQYAYVAGKLGILQSVDDEDPEPFFFPCDM
                     LNIQDPMFLMLMSDSPQLREFLVRNIDNIANDTEAFVNRYDLNRHMIYNTLLMVEGKQ
                     LDRLKQRSEKVLAHPTPSKWLQKRLYDYRFFLAFAEQDAEAMKAALEPLFDKKTARMA
                     AKETLSYFDFYLQPQIVTYAKIASMHGFDLGIDQEIAPRDLIVYDPLPADEYQDIFDF
                     MKQYDLSYPYEYLQDWIDYYTFKTDKLVFGNAKRE"
     gene            complement(1424..2044)
                     /locus_tag="WHR07_001005"
     CDS             complement(1424..2044)
                     /locus_tag="WHR07_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130230.1"
                     /translation="MLGVVPGIGESIQAYKVAKAAKNLQGMKKALDKAATVATAQGYV
                     SKTKIKIGQIELRVTAATDKQLLKAIGEGRDTTGKMTEQLFDSLAKQNGFRVLSGGKY
                     GGNNGFDHVWQAADGSVVLIVESKQIRNGTVQLNPNGAGGYTQMSREWIKQVVKSLPD
                     GSPAKAVVLKANQNGKLKTAIAGVDRQTGKAVILSVKVPSKTNIRR"
     gene            complement(2123..2548)
                     /locus_tag="WHR07_001006"
                     /pseudo
     CDS             complement(2123..2548)
                     /locus_tag="WHR07_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239852.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
     gene            complement(2596..2868)
                     /locus_tag="WHR07_001007"
     CDS             complement(2596..2868)
                     /locus_tag="WHR07_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130231.1"
                     /translation="MNKRMKMCPACQQGYLYHSKPKYLHDEIILCDECDAVWLKGMNI
                     FYGEYEKDFYSYVPFMESQGITSECIWEGDLFDHPYYEDENSNDMD"
     gene            complement(3056..3544)
                     /locus_tag="WHR07_001008"
     CDS             complement(3056..3544)
                     /locus_tag="WHR07_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130232.1"
                     /translation="MKKDIFYCEQWSYGYKRLHKPFSEKQAEEKHIKGELYSAVIGSA
                     TQPEYVITLREEVGFFSVDFFDKFGRDYLTHQFQKYSNSNYYFLSMAVWRDYITLDSH
                     DLAEGYTYFFNENTDDCYVLKEDFINNERYEKTELYSQKDKVILFPKFGEYDLVLNPD
                     II"
     gene            complement(3541..6042)
                     /locus_tag="WHR07_001009"
     CDS             complement(3541..6042)
                     /locus_tag="WHR07_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HEZ2130233.1"
                     /translation="MLKTPPTLAAELSGKTGVSISAPYANENSRIILSAADIAAENGK
                     IKLQSYGDQSYYAGQGELYTLERRSYKTGKWYNRKHITEVKEHKNAKPDAVNLSASQG
                     IDIKSGGSIDAYATVFDAPKGSINIEAGRKLTLYAVEELNYDKLDSHKKRKFLGITYD
                     KVHDTSTQQMQTALPSRVVAESANLQSGWDTKLQGTQFETTLGGAVIRAGVGDQARAD
                     AKIILEGIKSSIHTETVSSSKSALWQKQAGRGSNIETLQLPSFTGPVAPVLSAPGGYI
                     VDIPKGNLKTQIETLTKQPEYAYLKQLQVAKNINWNQVQLAYDKWDYKQEGMTPAAAA
                     VVVIVVTVLTYGALSAPAAAGTAGAAGAGAGGAAAGTAAGTGVAAGTAATTGVAAGTS
                     AAAITTAAGKAALASLASQAAVSLINNKGDINHTLKELGKSSTVRQAATAAVTAGVLQ
                     GISGLNTQAAEAVSKHFHSPAAGKLTANLINSTAAASVHTAINGGSLKDNLGDAALGA
                     IVSTVHGEVASKIKFNLSEDYIAHKIAHAIAGCAAAVANKGKCRDGAIGAAVGEMVGE
                     TLLDGRDVGKLSPQERQKVIAYSQIIAGSAVALVKGDVNTAANAATVAVENNSLLARR
                     RVNIRWTPRQELEHEYAILEIQAITNQIRRLDPKFNGIAIMRNPREPWTRHDVQTYRQ
                     YYNQLRESRGIPVLPIYRMRINNGNEFNRIMSSKYPYNELYVANPKSVTGHFRVDSYN
                     PATREIISRKFTQFSQIQESTGIGYIKEAVRKYSPGAVISNVPSTPASLRGRKLTGKL
                     ILEVPAQVNPIPQSVLRAAQEENVIIRDTTGRIYK"
     gene            complement(6292..6675)
                     /locus_tag="WHR07_001010"
     CDS             complement(6292..6675)
                     /locus_tag="WHR07_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130234.1"
                     /translation="MEKIKNYIEFKKLFKNITEKFVRDLDITLIEAAEYSIIEFEIYL
                     SEYPEDSTFIFTAWAIYLLENNCLNERGKDNFFIAEMKKCYQQTNLDRIKSIYSSSDY
                     HIFAKDVNKIQQTFKLNLANIMQQE"
     gene            complement(6680..9067)
                     /locus_tag="WHR07_001011"
                     /pseudo
     CDS             complement(6680..9067)
                     /locus_tag="WHR07_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249609.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
     gene            complement(9174..9437)
                     /locus_tag="WHR07_001012"
     CDS             complement(9174..9437)
                     /locus_tag="WHR07_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130235.1"
                     /translation="MDKEIKICPRCEQGYLYHAKPKYFSGEVILCDECYAMWLGDMKI
                     FYGQYGKDFYDYHEFMKDKGIEEINMWEGELFDHPYYEDEKFK"
     gene            complement(9456..10886)
                     /locus_tag="WHR07_001013"
                     /pseudo
     CDS             complement(9456..10886)
                     /locus_tag="WHR07_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224022.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
     gene            complement(11271..11645)
                     /locus_tag="WHR07_001014"
     CDS             complement(11271..11645)
                     /locus_tag="WHR07_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF596 domain-containing protein"
                     /protein_id="HEZ2130236.1"
                     /translation="MDEKQKIKILDFQIDLSSIFNSYKNQMGINIQDKNLKNNFCSFM
                     EELLNDGSIRLHDYTDGIGIPLTGTSKEQVQKLKDIWPTLEDAQAIWPEDPWYYLEWL
                     WWDIACPIDLADLPNIDIYEQA"
     gene            complement(11664..>12143)
                     /locus_tag="WHR07_001015"
     CDS             complement(11664..>12143)
                     /locus_tag="WHR07_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130237.1"
                     /translation="AAPKETINNLANLAKAEQQILFRIAQRDTQLDAWKTGFNNRVRK
                     GAGLLDASNIPITINGKTIKPVQAISLKGAPVYSGVSEQEIFALYRQMTGQNPNFRVL
                     PDGRLANGIISTGEWAGTKIALRNFSKTENSTQARWTLDLQNPPSFIKGTKLELKFQ"
BASE COUNT         2937 a         2810 c         2574 g         3822 t
ORIGIN      
        1 caagctgtct tcctcttagc agattaggtg tacttggaac attggaaatg acaaagtgag
       61 tgcgcaaagc cacctgaagg cgatgtgttt gaacctgttg aaagcggcca acaggctaaa
      121 tgcgcccgct gccgcctaaa aggcagcccg gatgcctgat tatcgggtgt ccgaggagga
      181 ttaagggggt atttgggtaa aattaggagg tatttggtac gaaaacagcc gaaatcctgt
      241 gtttgggttt cggatgtcgg ggaagggctt ttttgcaaag gtctcaactc atgttattgc
      301 aaagatctca tgccttgttt tgccagcagg ttgagttctt ctccggcaat cagcgtggta
      361 aagccccgcc acaacacaga tctatgtact gtggaagggc ttcaatttat agctttcaaa
      421 aatctttcag ctttaagacg gcctaaagtt gtaatctata aaacaggagc tcagagtttt
      481 acggctcact ctcgcttcgc gttaccaaat accagcttat cggttttgaa cgtatagtaa
      541 tctatccaat cctgcagata ttcatacggg taagacaagt catactgttt cataaaatcg
      601 aagatgtctt gatattcgtc tgccggcagc ggatcgtaaa caatcaaatc cctcggtgcg
      661 atttcttgat ctatgcccaa atcgaaaccg tgcatggatg cgattttggc gtaggtaacg
      721 atttgcggct gcaggtagaa atcgaaatag gacaatgttt ctttggcagc catacgcgcg
      781 gtttttttat cgaaaagcgg ctctaaggcg gccttcatcg cctcggcatc ctgttcggcg
      841 aaagcgagga agaagcggta atcgtacaac cgcttttgca gccatttgct aggggtggga
      901 tgcgccaaga ctttctcgct acgttgtttc aaccgatcaa gctgcttacc ctccaccatc
      961 agcagagtat tgtaaatcat atgacggttg aggtcgtatc ggtttacgaa ggcttctgta
     1021 tcgttggcga tgttgtcgat attgcgcacc aaaaactcgc gcagctgcgg gctgtcgctc
     1081 atcagcatca gaaacatcgg atcttgaatg ttgagcatgt cgcagggaaa gaagaagggt
     1141 tcggggtctt catcatctac actctgcaaa atacccaact ttcctgcaac ataagcatat
     1201 tgcttgaatt tcttaagatc atgttcaaat agataggcat gggaagccgc agcttcagtg
     1261 tacattaaaa tgtatttcat cgctgcaagc ggaacgcctt ttctttcatc tacataatct
     1321 atagattcgg ggcaaccgct attgaaatta gcagtattgc ctatgattac attagtaata
     1381 tgttcatacc atttttgggt ggtcatcata ttgtgcccca ttgttatctc cttatattgg
     1441 ttttagaagg aactttgaca gaaagaataa cggccttacc tgtttgacga tcaacgcctg
     1501 ctattgccgt ttttaatttg ccgttctgat ttgcttttaa gacaactgcc ttagcaggac
     1561 taccatcagg taaacttttt acaacttgtt taatccattc acgactcatc tgcgtatatc
     1621 cacccgcacc attcggattc agctgtaccg taccgttcct aatctgctta ctttctacaa
     1681 tcaaaacaac actaccatcg gcagcctgcc atacatgatc aaaaccgtta tttccgccgt
     1741 atttgccgcc cgaaagcact ctgaagccat tttgtttagc taaagagtca aataactgct
     1801 cggtcatttt acctgtcgtg tcccttcctt cgccaatagc tttcagcaat tgtttgtcag
     1861 ttgctgcagt aacccttaat tcaatttgac cgattttgat tttggtttta ctgacatagc
     1921 cctgtgcagt ggcaacggtt gctgccttgt ccaaggcttt tttcatgcct tgtaaatttt
     1981 ttgccgcttt cgctacttta taggcctgta tcgattcacc gatacccgga accacaccca
     2041 gcaaagcaaa caggtgatcg gcagcggtct gtgcttgtac aaaactctgt atatcaccga
     2101 taattggaat aaatcctgtc tgaagaagca aaacttctcg atattcttca ggattttcac
     2161 gtatccattt ttgttgttcc ttttgaaatt catcacactt tgcaccaacg catctaggat
     2221 acaaagtatt attctccacc gctatctgtg ccgcattcgc cgctgtattc acatccccgc
     2281 ctacaacggc agacgcagtg ccggcaacca gttttgaata ggcagtaatc ttcgctttag
     2341 attttttgat ttcggtcgca ctcatacgac tgaaatcagt attcttaacc aaagcctcac
     2401 caacaatctc accgactgca gcgcctatcg cgccatcctg acacttgccc ttattcgccg
     2461 ccgctgccgc acagcccgct atggcatggg caatcttgtg ggtggtatat cgctgccagc
     2521 cctctctgtt gataatcttg cgtatgatta cgccgtttga tggctaatcg tacctacgca
     2581 ggcttaaaat ttccatcaat ccatatcatt tgagttttca tcttcataat atggatgatc
     2641 aaacaaatct ccttcccaaa tacattcact cgttatacct tgggattcca tgaaaggaac
     2701 ataagaataa aaatcttttt catattctcc ataaaatata ttcatacctt tgagccatac
     2761 tgcatcgcat tcatcacaca gaataatttc atcatgaaga tatttaggtt tcgaatggta
     2821 gagatagcct tgttgacaag caggacacat tttcattctc ttattcatga ttactccata
     2881 taatcgattt atttttgtgg gtaagcagta gtgatttgat tgctgccttt agtctgtaca
     2941 acaatacgta tatagcaatc tgataatttc ctggttttta tcagctttat cctcagattc
     3001 caaacccaat aataaaagcc gtttgaaatt tttttcagac ggccttaaaa cttaattaaa
     3061 taatgtccgg atttaacacc aaatcatatt cgccaaactt tggaaataga attaccttat
     3121 ctttttggga atataattct gttttttcat atcgctcatt attaataaaa tcctctttca
     3181 aaacatagca atcatccgta ttttcattga agaaataagt atatccttct gctaagtcat
     3241 gagagtctaa agttatataa tctctccata cagccataga aagaaaataa taattcgaat
     3301 tggaatattt ttgaaattga tgggttaaat aatcccttcc aaatttatcg aaaaaatcta
     3361 ccgaaaaaaa acctacttcc tctcgcaagg taattacata ttcaggttgt gtcgccgaac
     3421 ctattacggc actatataat tcccctttaa tatgtttttc ttcagcttgt ttctcagaaa
     3481 aaggcttatg aagtctctta taaccataag accactgctc acaataaaaa atatctttct
     3541 tcatttgtaa atccttcctg ttgtatctct aatgataaca ttttcttctt gtgccgccct
     3601 taatacagat tgtggaattg gattgacctg agcaggaact tctaaaataa gttttcctgt
     3661 aagttttctt cctcttagcg aagcaggtgt acttggaaca ttggaaatga cagcaccagg
     3721 gctatatttt ctaacagcct ccttgatata accaatcccc gtactttctt ggatttgaga
     3781 aaattgggta aattttcttg aaataatttc ccttgttgca ggattatacg aatctaccct
     3841 aaaatgtccc gttaccgatt taggattggc tacataaagc tcattataag ggtattttga
     3901 tgacatgata cggttaaatt cattgccgtt gtttatcctc attctataaa ttgggagaac
     3961 aggaatgcct ctggattccc ttaattgatt ataatattgc ctgtatgttt gtacatcatg
     4021 tcttgtccac ggctctctag gattcctcat aatagcaatc ccgttaaatt tcggatccag
     4081 ccttcggatt tgattggtaa tggcctggat ttcaagaatg gcatattcat gttccaattc
     4141 ttgtcgcgga gtccaacgta tatttaccct cctgcgagct aaaagactat tattctccac
     4201 tgccacagta gccgcattcg ccgccgtatt cacatcccct ttaaccaatg ccactgcgct
     4261 gcctgcgata atctgcgagt aggctatgac tttttggcgt tcttggggtg acagtttgcc
     4321 tacatcgcgt ccgtccaaca gggtttctcc caccatctcg ccgactgccg cgccgattgc
     4381 gccgtcccga catttgcctt tatttgctac cgctgccgca cagcccgcta tggcatgggc
     4441 aatcttgtgg gcaatgtagt cttcgctgag attaaatttg attttgctcg ctacttctcc
     4501 gtgtacggta ctgactatcg cacccagtgc ggcatcgccc aagttgtctt ttaggctgcc
     4561 gccgttgatg gcggtatgga cacttgcggc agcggtgctg ttgatcaggt tagcggtcag
     4621 tttgcctgct gcgggactgt gaaaatgttt gctgacggct tcggctgctt gggtgttcag
     4681 cccgcttatg ccctgcagta cgcctgcggt tacggcggcg gtggcggcct gtctgacggt
     4741 gctgcttttg cccagttctt tcagggtatg gtttatgtct cctttgttgt tgatgaggga
     4801 aactgcggct tggctggcga gactggccag tgcggctttg cctgcggctg tggtgatagc
     4861 tgcagctgat gtgcctgctg ctactccggt tgtggctgcc gttcctgctg ctactccagt
     4921 tccggctgcc gttcctgctg cggctcctcc cgctcctgcg cctgccgcgc ccgccgttcc
     4981 ggcggctgcc ggggcggaca gtgcaccgta ggtcaatacg gttacgacga taacgacgac
     5041 agctgctgct gcgggtgtca tgccctcctg tttgtagtcc catttatcgt aagcaagctg
     5101 cacctgattc cagttgatgt ttttcgcaac ttgaagttgt ttcaaataag catactcggg
     5161 ctgcttggtg agggtttcga tttgggtttt cagattgcct ttcggaatgt cgacaatgta
     5221 accgccggga gcagagagta cgggcgcaac ggggccggtg aaacttggca gttgcagggt
     5281 ttcgatgttg ctgccgcgtc ctgcctgttt ttgccagagg gcggatttgc tgctgcttac
     5341 ggtttctgtg tggatgctgc ttttgatccc ttcgaggata atcttggcat cggcccgtgc
     5401 ctggtcgcct acgcctgcac ggatgaccgc gccgcccagc gtggtttcaa actgcgtacc
     5461 ttgtaacttg gtatcccaac ctgattgcag attagctgat tcagccacta cacggcttgg
     5521 taaggcagtt tgcatctgtt gggtagaggt atcatgtacc ttatcataag taatgccgag
     5581 aaatttgcgt ttcttatgac tgtctagttt gtcgtagttg agctcttcta cggcatagag
     5641 tgtcaatttc cgcccggctt cgatgttaat gctgcctttg ggggcatcga atacggtggc
     5701 gtaggcgtcg atgctgccac cagatttgat gtcgatacct tgggatgcgc tgaggtttac
     5761 tgcgtcgggc ttggcgtttt tgtgttcttt gacttcggta atgtgtttgc ggttgtacca
     5821 tttgccggtt ttgtagctgc ggcgttctaa ggtatagagt tcgccctgcc cggcgtaata
     5881 ggattggtcg ccgtaggatt gcagtttgat tttgccgttt tctgcggcta tatcggcggc
     5941 actcaaaatg atgcggctgt tctcattggc atacggtgcg ctaatgctca caccggtttt
     6001 acccgaaagt tctgcagcaa gcgtaggggg tgtcttcagc acgcacgcgt ctgggcagta
     6061 tatagggaat ctgaatattt acttgaataa caaatgccgt ctgaaaaatt gtgagctttt
     6121 cagacggcat tgagccgtaa atcatggaac gcgtgcgtgc tgaagcacac accttacgca
     6181 tggattttag gtttcatgca ggctacagct tgctgcggcg gcggtataaa agtattttta
     6241 gtgatttacc gtttttggta attttgcccg acggggttaa aaatacagtt gctactcttg
     6301 ctgcatgata ttggcaagat ttaatttaaa tgtttgttga atcttgttta catccttagc
     6361 aaaaatatga tagtcactcg aagaatagat agattttatt ctatccaaat tagtttgttg
     6421 ataacatttt ttcatttccg cgatgaaaaa attatctttt cctctttcat tgagacagtt
     6481 attttctaac agatagattg cccatgctgt aaaaataaat gtactatctt ccggatattc
     6541 agataaataa atttcgaatt caattataga atattcagct gcttcaatta atgttatatc
     6601 taaatctctg acaaattttt ccgttatatt tttaaataat ttcttgaatt ctatataatt
     6661 ttttattttt tccatgattc tattttcctg taaaaatatt taattgaata tttggatagc
     6721 gatttctaaa ctctaaaata acattgctgc aagattgaca ggcctttaat tctgtaaata
     6781 gatcaattct acctgataca ttacgattat ttccgagttg ctgtgctata gtttcaagta
     6841 atttatattc tccatctata tttcttaatg ttcctctagg aggagaggca atattatgat
     6901 atttatcaac agatataggt ttaaaaattt ttgtttcagg taacgaaata aatccatgtt
     6961 cccctttttg gaaagaacta aatgcttcca tcctttgcgg taatccttta acatcaattt
     7021 ttgctatcgc aagattccct atttgtcgat actcttccgg cagtttcatg cggattctct
     7081 ggctttcagc agttaaagct tgtcttaaag caggagcact gtcattgctc agataacggg
     7141 taacaggtgc aggcttggcc gatattgcag cctgtgcaga tacagatcct gcaaccatca
     7201 atgtgccatt aacaacctga actgtaccat gcagatattc tccattagag attgctttcg
     7261 ctccctgtcc aatgttatat cctcctgctg ccacagtagc tgctttgaca ctgaagccaa
     7321 gcggtccgtt taataagtaa agtgcaggtt gtgcggcaac agctgatttg taatcaaaag
     7381 aatcataacg actcaatgtt tgataggctt tcgataaggt gttattaata tctttggaag
     7441 gaatagtgag attacccatt gactggggcg ttttcagtat cgaagctgcc caagctgtgt
     7501 tacctccaga ggtttggtta ataaaatatg caagaatatt tttttcttga ttatttaaac
     7561 tacttggatt tttttgatat cggtcaagca attgattaga atatcgatct ttctcaatca
     7621 aatagataaa ctgccttgcc tcttgttcgg tcaggctgcc ccaatctaaa gataataggc
     7681 ctttcccttt ggcttttttg atcaattttt ctctaagagc atactcttct tgagataata
     7741 ggttattttc aatcgcgact ttagccgcat tcgccgctgt attcacatcg ccgccgacca
     7801 caccgcttac cgtaccggca accagtttgc tgtatgccaa aatctgttcg cgttctttag
     7861 ctgtcaaagt ggcaggattt ttgccgtttg tcaaagcctc cccgactatc tcgcccacag
     7921 ccgcaccgat cgcaccatcc tgacacttac ccttattcgc cgccgctgcc gcacagcccg
     7981 ctatggcatg ggcaatcttg tgggtaatgt agtcttcgct gagattaaat ttgattttgc
     8041 tcgctacttc tccgtgtacg gtactgacta tcgcacccag tgcggcatcg cccaagttgt
     8101 ctttgaggct gccgccgttg atggcggtat taatcagtgc ggcactgccc gcattggcta
     8161 ggttgacggt caggttgttg atccactgct tatcgctgac attgttcagt gccgaagcgc
     8221 cgattttgtc ggctacgcct gcggtagcgg cggcaaccac cagatttttc accgtgctgc
     8281 ttctgcccag ctctttcagg gttttgccga catcgccttt gttgttgatg aacgatacgg
     8341 aagcctggct ggccaaagag gcgaatgctg catcggttgc ggcggcggcc gcaccgttta
     8401 atcccaatac ggctccggtt cctgcgcctg aggtgaccac ggtaacggcc agtgcgataa
     8461 tcgccgcacc tgcttcggtt aagccctcct gtttgtagtc ccatctgtcg taagcaagct
     8521 gcacctgatt ccagttgatg tttttcgcta cttggagctg tttcagatag gcatactcgg
     8581 gctgtttggc cagcttttcg atttcggttt tgaggttgcc tttggggatg tcggcgatat
     8641 agccgccggg agcggtcagc ttaggcagtg ccggcccttc aaagctcggt agcttcagcg
     8701 tttcaaccgt gctgccgctt ccggcctgct tttgccatac ggtcgagttg gattccagct
     8761 tttcttcggt ttggatgcgg ttaacgatgc cttttaggat aattttcgca tcggctcggg
     8821 ctttttcacc cacccctgcc tgtatgtcgg ctccggaaag ggtggttttg aattcggtgc
     8881 cttcgagtac ggtatcccag ccggaacggg ttttggctgt ttgggcgata acgcgtacgg
     8941 gcagtttggt ttcgttcagc tcgtttttgc tgtaattgct tttacccact ttgatgccga
     9001 tgaaacgggt acttttctga acattcaatt ggtgttggtg aatgccttcg gctgccagca
     9061 gttgcattga ggccgtctga aaaacggata ttcagacggc ctattgctac tttaaataat
     9121 atttgggttt aaaatatcat cgtatttccc aaattcgggg aacagaaaat caattattta
     9181 aatttttcat cctcataata tgggtgatca aaaagctctc cttcccacat atttatttct
     9241 tctatgcctt tatctttcat aaactcatga taatcataaa aatcttttcc atattgtccg
     9301 taaaaaattt tcatatcccc aagccacata gcataacatt catcgcataa aatgacctcc
     9361 ccagagaaat atttaggctt tgcatgataa aggtagcctt gctcacatct tgggcaaatt
     9421 ttaatttctt tatccataag agattccttt cttaattatt tctgaggata tgcagaaatg
     9481 attttatttg ttcctttttg cacaacaatc cgcacttttg tttctccttt tgttccaata
     9541 ggtttcttca tatctacaag atatacggat gaatcatttg gcaaaggatt tcctttcatt
     9601 ctccaagctt catcaaccaa aggcaaaact tctttacggg acacattaaa aacagaatga
     9661 acaggtttgt ttggatttgg aattgtatgg gctaaaacat gtttaatcct attaccatgc
     9721 ttagcatcta acccataatc taaccccgcc ggtgttgtcc aaaccttatt aaccttatca
     9781 taagtaagct tgattccggt ctgcttctga atttcctgta tggctttagc cgtatcaact
     9841 gcttcgtctc ccgccttcag aacataagcc ccgcctcggc tgattttagt cgcacctgcc
     9901 ggaacaaagg gaacggcagc tgcggcggca tccacaccaa aatcaatcgc cgcttctcga
     9961 gccatctgct tatcgccaat agatttggcg taaatccatt taccgccgtc ccatacgagg
    10021 ttgccgatat cccaaataat atctaatgca ttatttttaa cagctgtttc ggaagcattt
    10081 gccgccacat caacattgcc tcctgtaaca cctacagtcg ctccggctac caattttgca
    10141 tacgcagtaa tattcgcttt agctttttca atttcagaag cagtcatacc gctgaaatcg
    10201 gtattcttaa ccaaagcctc cccgacaatc tcccccacga ccgcaccaat cgcgccgtcc
    10261 tgacacttgc ccttattcgc cgccgctgcc gcacagcccg ctatggcatg ggcaatctta
    10321 tgggcaatgt agtgctgatc caattgtttg attttacttg ctgcctctcc atgcgcagta
    10381 ttcaccaaag ccgcaaggat attcgcttcc agattgtctt tcagactgcc gccgttaacg
    10441 gcggtgttaa tcagcgcggc actgcccgca ttagccaagt tgacgttgag gttgtttacc
    10501 caaggggttt cgctccaagt ggcaagggag gaagcaccga ttttgttgga tacgcctgcg
    10561 atggccgctg ctacaaccag ttttttcact gtgcggcttc tgcccagctc cttcagggtt
    10621 ttaccgacat cgcctttatt gttgatgagc gatacggaag cctggctggc cagcgaggcg
    10681 aatgcggcat cggttgccgc tgcggccgcg ccgtttaagc ccagtgcggc tccggctccc
    10741 gcgcccgcag taaccacggt aacagccagc gcaataatcg ctgctccggc tccggttaag
    10801 ccttcctgtt tatagtccca tttgtcgtac gccagttgta cctggttcca gttgacgtct
    10861 ttggtgactt ggagctgttt caaatagcaa gcgtaggggg tgtcttcagc acgcacgcat
    10921 ctgggcagta tatagggaat ctgaatattt acttgcataa caaatgccgt ctgaaaaaat
    10981 tgagcttttc agacggcatt gagccgtaaa tcatggaacg cgtgcgcgct gaagcacaca
    11041 ccttacgcat ggattttagg tttcatgcag gctacagctt gcttccataa atcattttta
    11101 tcagagctcg taggtacggt tagccgcctt tagcggcgta accgtacgaa tgaaatgcca
    11161 agttgcaagg ccgtctgaaa aagttgaaaa acagatttca gacggccttg ttattttata
    11221 aagtttgctg atatgcgtac ggttacgccg ctaaaggcgg ctaaccatac ctacgcttgc
    11281 tcataaatat caatattcgg caaatcggcc aaatctattg gacacgcaat atcccaccaa
    11341 agccattcta agtaatacca agggtcttca ggccatattg cttgggcatc ttccaaagta
    11401 ggccatatgt ctttcaattt ctgcacttgt tcttttgaag ttccagttag aggaattccg
    11461 ataccgtcgg tataatcatg taaacggatt gaaccgtcat ttaacagttc ttccataaaa
    11521 gaacagaaat tgttttttaa gtttttatct tgaatattaa tacccatttg atttttataa
    11581 gagttaaaaa ttgaggataa atcgatttga aaatcaagaa tcttaatttt ttgtttctca
    11641 tccacggtaa aatcctttgt aaattattgg aatttaagct ccaatttagt acctttaata
    11701 aatgatggag gattctgcaa atctaatgtc catcgtgctt gagttgaatt ctctgttttt
    11761 gaaaaatttc ttaatgcaat ttttgttcct gcccattctc cagtactgat aatgccattt
    11821 gctaatcttc cgtcaggcaa aactctaaaa ttcggattct ggccagtcat ctgccgataa
    11881 agcgcaaaaa tctcctgttc gcttacgccg ctgtaaacgg gtgctccctt taagcttatg
    11941 gcttgtacag gtttgatggt ttttccgtta atggttatcg gaatattact tgcatcaagc
    12001 aagcctgctc ctttccttac tctattgtta aatcccgtct tccatgcatc cagttgcgta
    12061 tcgcgttggg caatacggaa taaaatctgc tgttctgctt tggctaaatt tgccaaattg
    12121 tttattgttt ctttaggagc agc
//
LOCUS       DAWGKF010000054        11533 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.054, whole genome shotgun sequence.
ACCESSION   DAWGKF010000054 DAWGKF010000000
VERSION     DAWGKF010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11533)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11533)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11533
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.054"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            121..543
                     /locus_tag="WHR07_001016"
     CDS             121..543
                     /locus_tag="WHR07_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130238.1"
                     /translation="MKKTFLSAVLLLSAATQTVWADTVFSCKTDNNKYIEVQKINRNL
                     YEYSFGSAAKKEIAIRNSKADLLGRSDRWQGWGRGRWATMKFQNGEFMYTVDAGFDSV
                     THAVGSGVLVERRGKEIARFDCTSKTAQANFDDDDFAW"
     gene            582..1322
                     /locus_tag="WHR07_001017"
     CDS             582..1322
                     /locus_tag="WHR07_001017"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEZ2130239.1"
                     /translation="MLIVRPSGRAKDDVETCRRAEWQAEVLSPIEIETDKASLKRLPE
                     MYARADAVFWVSPTAVETAVPYLNLSDGIKMHISVGQGSRRALERCLGRTVIAPDDGN
                     DSEAVLRLPVWNSLPEGARVLFVRGHGGRDFLMNALQEKGFRTEVAEVYFRRHKPLNF
                     QNFQTENIAAAYITSAELVQSLFAQVPPQFSRFFKSLLYFTHHPRIAEALKREGVCSV
                     ETVPTLEAALSHSSISVSDGMVFPGTSN"
     gene            1337..2671
                     /locus_tag="WHR07_001018"
     CDS             1337..2671
                     /locus_tag="WHR07_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HEZ2130240.1"
                     /translation="MGEPENKSSEPVREIQASKEMPSETSSPRKENETEVHIPAAPFI
                     VKQSGSNALAVCALVLAALGLGTSGFLFVQGQNVLKNQELAFNQKIDKAALGESENAA
                     LLKDNLNRQAAIQSELDRLDGNVKANGEQILEMQKSYRELTKGRADWLVDETETILNL
                     AAQQLVLTGNIQTAVGVLEHIDSRLSRFDQAELLPIKQAVSSDLAELKNRPYVDISGT
                     ALRLDRLETAVSGLPLMLDGVLKPGVQVKNEAASASWWQNVWEKSLGTLKGLVEIRRL
                     ENNDAMLISPEQAYFVRENLRLRLLDARTALMQRNSEVYQGDLNNAEAAVRQYFDAKS
                     PATQSWLKELAELKALDVRMTADDGLKNSLNAVRAYRDGTRMTAAENQEAEQAASEPA
                     NENTASEPAAASDVKTIEAPSLPSERKPEQPAKKQPVPEKAGRSPSAKGERA"
     gene            2668..3885
                     /locus_tag="WHR07_001019"
     CDS             2668..3885
                     /locus_tag="WHR07_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HEZ2130241.1"
                     /translation="MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAF
                     VLGSLIAVVVWYFLFKFIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEK
                     AELEASRVLVNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYL
                     LLAESALNRRDYEAAEANLHAAAKMNANLTRLVRLQLRYAFDRGDALQVLAKTEKLSK
                     AGALGKSEMERYQNWAYRRQLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLG
                     LYADAVKWVKQHYPHNRRPELLEAFVESVRFLGEREQQKAIDFADAWLKEQPDNALLL
                     MYLGRLAYGRKLWGKAKGYLEASIALKPSISARLVLAKVFDETGEPQKAEAQRNLVLA
                     SVAEENRPSAETH"
     gene            3960..5024
                     /locus_tag="WHR07_001020"
     CDS             3960..5024
                     /locus_tag="WHR07_001020"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HEZ2130242.1"
                     /translation="MTLLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAG
                     SFLDLCKNTELATEVTIQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRA
                     MQHEADIAKLHVPDMEKLQYVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGS
                     KEFRTIKTMMYSRPDLLHKILDTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAF
                     KEFSLKYIRQIVAGLKRESEGRRVPVIVFAKGGGLWLESMAQIGADALGLDWTCNIGE
                     ARRRVGNQVALQGNFDPSALFGTPESIRAEVARILADYGHGSGHVFNLGHGINQHADP
                     EHAKILVDTVHELSRQYHGG"
     gene            5202..6581
                     /gene="radA"
                     /locus_tag="WHR07_001021"
     CDS             5202..6581
                     /gene="radA"
                     /locus_tag="WHR07_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEZ2130243.1"
                     /translation="MAKTLKTLYQCTECGGTSPKWQGKCPHCGEWNTLQESLAAPEPK
                     NARFQSWAADTSTVQSLSSVTATEVPRNPTGMGELDRVLGGGLVDGAVILLGGDPGIG
                     KSTLLLQTIAKMAQSRKVLYVSGEESAQQVALRAQRLELPTEGVNLLAEIRMEAIQTA
                     LKQHQPEVVVIDSIQTMYSDQITSAPGSVSQVRECAAQLTRMAKQMGIAMILVGHVTK
                     DGAIAGPRVLEHMVDTVLYFEGDQHSNYRMIRAIKNRFGAANELGVFAMTENGLKGVS
                     NPSAIFLASYRDDTPGSCVLVTQEGSRPLLVEIQALVDDAHGFTPKRLTVGLEQNRLA
                     MLLAVLNRHGGIACFDQDVFLNAVGGVKIGEPAADLAVILAMLSSFRNRPMPEKTVVF
                     GEIGLSGEVRPVARGQERLKEAEKLGFKRAIVPKANMPRNAKEFPNLKIYGVSSLQEA
                     IDICRDSRE"
     gene            complement(6856..7335)
                     /locus_tag="WHR07_001022"
     CDS             complement(6856..7335)
                     /locus_tag="WHR07_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HEZ2130244.1"
                     /translation="MKHILPLIAASALCISTASAHPASEPQTQNETAMTTHTLTSKYS
                     FDETVSRLETAIKSKGMDIFAVIDHQEAAHRNGLTMQPAKVIVFGTPKAGTPLMVKDP
                     AFALQLPLRVLVTETDGKVRAAYTDTRALIAGSRIGFDEVANTLANAEKLIQKTVGE"
     gene            complement(7467..7826)
                     /locus_tag="WHR07_001023"
     CDS             complement(7467..7826)
                     /locus_tag="WHR07_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEZ2130245.1"
                     /translation="MNIKHLITAALIASAAFAAQAAPQKPLSAAQTAQHPAVWIDVRS
                     EQEFSEGHLHNAVNIPVDQIVRRIHEAAPDKDTPVNLYCRSGRRAKAALQELKKAGYT
                     NVANHGGYEDLLKKGMK"
     gene            complement(7865..11479)
                     /gene="recB"
                     /locus_tag="WHR07_001024"
     CDS             complement(7865..11479)
                     /gene="recB"
                     /locus_tag="WHR07_001024"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HEZ2130246.1"
                     /translation="MSAPIQAFDPLTVPIAGTNLIEASAGTGKTYGIAALFTRLIVLE
                     QKNVERVLVVTFTKAATAELKTRLRARLDDVLQVLESKEIAKLGDDTLSDGIAAYCAE
                     HHKGDTFLPALLKQALQKEGRTRLIVRLKAAIGQFDNAAIYTIHGFCQRILRDYAFLC
                     QAPFDVELTEEDGDRLLVPAQDFWRERVSNDPVLAALAFKRKAVPQTVLAQIRAYLSR
                     PYLNFRRPQTDLPQARDAALASWQNICGNLAELKETFWRIHPLLNGNSYRKNSFAELF
                     DALEQKALSPDLPFLEAKLHERLLKLASDKLEAGLKKGKTPDAAVFAELQKLADFRRD
                     LDALEEAEEATIIRLQLDLIGYLNRSLAEMKKSRRERGFDDLLLDVHTALTDNPHAET
                     LARAVAENWETALIDEFQDTDPLQYEIFQKIFIAQNRPLFLVGDPKQAIYSFRGADIY
                     AYLQAAEDARHRYTLATNYRSHAALIGSIGALFRLKERPFVLENIGYSEVGAARAESR
                     LSPERPAVQVRWLHENDNEKANKDVLRRRAADYCADEIAHALNEAAECRLNFKGCPLQ
                     SGDIAVLVRTHNEAVMVSAALKKRQVQSVLLSRESVFASPEATALSALIGFWLEPRRA
                     GTLRFVLTSGIFGYDAQQLHDFNQNESEILHWAESARTALDNWNQYGIFAAMQQFSQT
                     HGIETRLLSRNNGRSLTNYFQLLELLAAEDAQNRNPAALHKWLRDQISLAGNNSGDNR
                     AIRLESDEDLVKIVTMHASKGLQYPLVYCPFAWDAQDTGPSDWQILHQSANRTELLAK
                     AQLSEDEQKQYADEEMAERLRLLYVALTRAEEQLNIYAAYSSDTADNPLAYLIEGLPQ
                     DSRETVRQTYDREKDGIAMLKRNWRRLTDNAPAGTDFAFTEDAPPPAAYRGNAGQTAE
                     FAANSIPERRFRFVRHTSFTALSRHTQTPDGGEEDACPSLDAAETSVPAMPSETPTAS
                     DGISIHDFPKGTQAGLCLHEILEDFKFGQAAAGQETLIADKLKKYGFEEIWLPAVAEM
                     AEACRKTPLTGAYCLSDIPPECRCPEMGFTLHTEDFGLKRLRDWFARDDIRLPEVCRA
                     AAETLDFHTVNGFLNGFIDMVCQDPDGNICVIDYKSNHLGADASAYTQQAMDEAVAHH
                     HYYLQALIYAVAAARYFKLRGQPPAAVSVRYLFLRGLDGKGGGVWRWDIDAAALEQIK
                     "
BASE COUNT         2520 a         3048 c         3419 g         2546 t
ORIGIN      
        1 tgccgcccta tgtgttgccc taatttggaa ggggttacac ccttttcaaa taaaatctga
       61 tgctgctgcc acgaaggacg gatgtccaag tggcggggtt ttaaccatta aggaaatacg
      121 atgaaaaaaa cgttcctttc tgccgtattg cttctgtcag ctgcgaccca aaccgtgtgg
      181 gcagatacgg tgttttcctg taaaacggac aacaacaaat atatagaagt tcaaaaaatt
      241 aaccgcaatc tttacgaata ttcgttcggc agtgcggcaa aaaaagaaat tgccatacgc
      301 aacagcaaag ctgatctgtt ggggcgttcc gacaggtggc aaggctgggg cagaggccgt
      361 tgggcgacga tgaaattcca aaacggcgaa tttatgtaca ccgtagatgc aggcttcgat
      421 tccgtgaccc atgcagtagg cagcggtgtc cttgtggagc gtaggggcaa ggaaatcgca
      481 cggttcgact gtacgtcgaa aaccgcgcag gcgaatttcg acgatgacga ttttgcctgg
      541 taatcggggc ggataaggcg atagaaacag tgaaacccat catgctgatt gtccgaccgt
      601 cgggcagggc gaaggacgat gtggaaacct gccgtcgtgc cgaatggcag gcggaagtgt
      661 tgagtccgat tgaaatcgaa accgacaaag caagcctgaa acggctgccg gaaatgtatg
      721 cccgtgcgga tgccgtgttt tgggtcagtc cgaccgccgt tgaaaccgcc gtcccgtacc
      781 ttaacctttc agacggcata aagatgcaca tttccgtagg gcagggcagc cgccgtgcat
      841 tggaacgctg tttgggcaga acggtcatcg cgcctgatga cggcaacgac agcgaggcgg
      901 ttttgcgcct gccggtttgg aacagtctgc ccgaaggtgc gcgcgtattg tttgtgcgcg
      961 gacacggcgg gcgggatttt ctgatgaatg ccttgcagga gaaaggtttt cggacggagg
     1021 tggcagaagt ctatttcaga cggcataaac ctttgaactt tcaaaatttc caaaccgaaa
     1081 atattgccgc cgcctatatt acgtccgcag aactcgtgca gtcgctgttt gcacaggttc
     1141 cgccgcaatt ttcccgattc ttcaaatcct tgctatactt tacccatcat ccgcgcattg
     1201 cggaggcatt gaagcgcgaa ggcgtgtgtt cggtcgaaac cgtccctacg ctggaagccg
     1261 cgctttccca ttcttccatt tccgtttcag acggcatggt ctttcccgga acctcaaatt
     1321 aataaggagc aaaacggtgg gcgaacctga aaacaaatca tccgaacccg tacgcgagat
     1381 acaggcatca aaagaaatgc cgtctgaaac ctcttcccca cgcaaagaaa acgaaacaga
     1441 agtacacatt cctgccgctc cttttatcgt caaacagtcc ggcagcaacg ctttggcagt
     1501 ctgcgccctg gtattggcgg cattgggttt gggtacaagt ggttttttgt ttgtccaggg
     1561 acagaatgtc ttgaaaaacc aagagctggc attcaaccaa aaaatcgaca aagccgcctt
     1621 gggcgagtcg gaaaacgccg ccctgttgaa agacaacctc aaccggcaag ccgccataca
     1681 atcagagctc gaccgtttgg acggaaacgt caaagcaaac ggcgaacaaa tcttggaaat
     1741 gcaaaaatcc tatcgcgagt tgaccaaagg acgcgccgat tggctggtgg acgaaaccga
     1801 gaccatactc aatctggcgg cgcaacagct ggtgttgacc ggcaatatcc aaacggcagt
     1861 cggcgtattg gagcatatcg acagccgcct gtcccgtttc gatcaggcag agcttctgcc
     1921 gatcaaacag gcagtcagca gcgacttggc ggaactgaaa aaccgtccct atgtcgatat
     1981 ttccggcacg gcattgcgcc tcgacaggct ggaaaccgcc gtatccggac tgccgctgat
     2041 gctcgacggc gtattgaagc cgggcgtaca ggtgaagaac gaagccgctt ctgcttcatg
     2101 gtggcagaac gtatgggaaa aatccctcgg cacattgaag gggctggtcg aaatccgccg
     2161 tttggaaaac aacgatgcca tgctgatttc tcccgaacag gcatattttg tgcgtgaaaa
     2221 cctgcgcctc cgccttttgg atgcgcggac tgcattaatg cagcgcaaca gcgaagtcta
     2281 tcagggcgat ttgaacaatg ccgaagccgc cgtcagacag tatttcgatg ccaagtctcc
     2341 cgccacgcag tcgtggctga aagaactggc ggaattgaag gcgttggatg tgcgcatgac
     2401 ggcggatgac ggtttgaaaa acagcctaaa tgccgtccgc gcctatcgcg acggtacgcg
     2461 catgacggcg gcggaaaatc aagaagcaga acaggcggct tccgaaccgg caaacgaaaa
     2521 cacagcttcc gaaccggctg ccgcatcgga tgtgaagacc atagaagcac cgtccctgcc
     2581 ttcggaacgc aaaccggaac agcctgcaaa aaaacagccc gtaccggaaa aggcagggcg
     2641 ttcgccgtcc gctaaaggag aacgcgcatg aaaacggtag tctggattgt cgtcctgttt
     2701 gccgccgccg tcgggctggc attggcttcg ggcatttaca ccggcgacgt gtatatcgta
     2761 ctcggacaga ccatgctcag aatcaacctg cacgcctttg tgttaggttc gctgattgcc
     2821 gtcgtggtgt ggtatttcct gtttaaattc attatcggcg tattcaatat ccccgaaaag
     2881 atgcagcgtt tcggttcggc gcgtaaaggc cgcaaggccg cgcttgcctt gaacaaggcg
     2941 ggtttggcgt attttgaagg gcgttttgaa aaggcggaac tagaagcctc acgcgtgttg
     3001 gtcaacaaag aggccggaga caaccggact ttggcattga tgttgggcgc acatgccgcc
     3061 gggcagatgg aaaacatcga gctgcgcgac cgttatcttg cggaaatcgc caaactgccg
     3121 gaaaagcagc agctttcccg ttatcttttg ttggcggaat cggcgttgaa ccggcgcgat
     3181 tacgaagcgg cggaagccaa tcttcatgcg gcggcgaaga tgaatgccaa ccttacgcgc
     3241 ctcgtgcgtc tgcaacttcg ttacgctttc gacaggggcg acgcgttgca ggttctggca
     3301 aaaaccgaaa aactttccaa ggcgggcgcg ttgggcaaat cggaaatgga acggtatcaa
     3361 aattgggcat atcgccgcca gctggcggat gctgccgatg ccgccgcttt gaaaacctgc
     3421 ctgaagcgga ttcccgacag cctcaaaaac ggggaattga gcgtatcggt tgcggaaaag
     3481 tacgaacgtt tgggactgta tgccgatgcg gtcaaatggg tcaaacagca ttatccgcac
     3541 aaccgccgcc ccgagctttt ggaagccttt gtcgaaagcg tgcgcttttt gggcgaacgc
     3601 gaacagcaga aagccatcga ttttgccgat gcttggctga aagaacagcc cgataacgcg
     3661 cttctgctga tgtatctcgg tcggctcgcc tacggccgca aactttgggg caaggcaaaa
     3721 ggctaccttg aagcgagcat tgcattaaag ccgagtattt ccgcgcgttt ggttctggca
     3781 aaggtttttg acgaaaccgg agaaccgcag aaggcggagg cgcagcgcaa cttggttttg
     3841 gcaagcgttg ccgaggaaaa ccgaccttcc gccgaaaccc attgaaacct tcagacggca
     3901 tcgttgaaat gccgtctgaa aaccatttca cttgacaaac agactgacag aaaacccgta
     3961 tgactctttt aaaaaacgat accttcctcc gcgccctgct caaacagccc gtcgaataca
     4021 cgccgatttg gatgatgcgc caggcggggc gttatctgcc cgaatacaaa gccacacgcg
     4081 cgaaagcggg cagcttcctc gatttgtgca aaaacaccga attggcgacc gaagttacca
     4141 tccaaccttt ggaacgcttc gatttggacg cggcgatttt gttttccgac atcctgaccg
     4201 tccccgacgc aatgggcttg ggactgtatt ttgccgaagg cgaaggcccg aaattcaaac
     4261 gcgccatgca acacgaggcc gacatcgcca agctgcacgt tcccgatatg gaaaaactgc
     4321 aatacgtttt cgacgcggta acttccatcc gtaaagcatt ggacggccgc gtaccgctta
     4381 tcggcttttc cggcagcccg ttcacactcg cctgttatat ggtcgaaggc ggcggcagca
     4441 aagaattccg caccatcaaa accatgatgt actcgcgccc cgatttgctg cacaaaatcc
     4501 tcgataccaa cgcccaagcc gttaccgcct acctcaacgc ccaaatcgac gcgggcgcgc
     4561 aggcggtgca aattttcgac acttggggcg gcgtgttgag cgacgcggcg tttaaagaat
     4621 tcagcctcaa atacatccgc cagatcgtcg ccggactcaa acgcgaaagc gaaggccgcc
     4681 gcgtgcctgt tatcgtattt gccaaaggcg gcgggctgtg gctggaaagt atggcccaaa
     4741 tcggcgcaga cgcattgggc ttggactgga cgtgcaacat cggcgaagca cgccgccgcg
     4801 tcggaaacca agtcgccctg caaggtaact tcgacccgtc cgccctcttc ggtacgccgg
     4861 aatccatccg cgccgaagtc gcacgcatcc tagccgacta cggacacggc agcggccatg
     4921 tcttcaacct cggacacggc atcaaccaac atgccgaccc cgaacacgcc aaaatcttag
     4981 tcgacaccgt acacgagctg tcgcggcagt atcacggcgg gtaagccggc aggaaaccgc
     5041 ccgatatgcc gtctgaagcc gagggatgga aaaataaggc aatgcggcaa tatccgccgt
     5101 gtatggatag tacatgacgg cggcggtgtt gccgcattgg cgcaatccca accgtcccta
     5161 ttttcagacg gcatttttgt tttcagatgc agggaaaacc gatggcaaaa acgcttaaaa
     5221 ccctttacca atgcaccgaa tgcggcggca cttccccgaa atggcagggc aaatgcccgc
     5281 attgcggcga gtggaacaca cttcaggaaa gcttggccgc gcccgagccg aaaaacgccc
     5341 gcttccaatc ttgggcggcg gatacctcga ccgtccaatc cctctcctct gttaccgcga
     5401 ccgaagtgcc gcgcaatccg accggtatgg gcgaactcga ccgcgtattg ggcggcggtt
     5461 tggtcgatgg tgcggtcatc ctgctcggcg gcgatcccgg catcggcaaa tccacgctgc
     5521 tgttgcaaac cattgccaaa atggcgcaaa gccgcaaagt gctgtacgtt tccggcgagg
     5581 aatctgccca acaggtcgcc ctgcgcgcgc aacgtttgga actgcccaca gaaggtgtga
     5641 acctgcttgc cgaaatccgc atggaggcga ttcagacggc cttgaaacag catcagcccg
     5701 aggtcgtcgt catcgactcc atccaaacca tgtattccga ccaaatcact tccgccccag
     5761 gctccgtgtc gcaggtgcgc gagtgtgccg cccaactgac gcgcatggcg aaacagatgg
     5821 gcatcgccat gatactggtc ggacacgtga ccaaagacgg cgcgattgcc ggcccgcgcg
     5881 tgctggaaca catggttgat accgtgctgt atttcgaggg cgaccaacat tccaactacc
     5941 gcatgatacg cgccatcaaa aaccgcttcg gcgcggcaaa cgaactgggc gtgttcgcga
     6001 tgacggaaaa cggtttgaaa ggtgtgtcca acccgtccgc catcttcctc gccagctacc
     6061 gcgacgatac gcccggctcg tgcgttttgg ttacacagga aggcagccgc ccgcttttgg
     6121 tcgaaattca ggcattggtc gatgacgcgc acggcttcac gcccaaacgc ctcaccgtcg
     6181 gactggaaca aaaccgtctt gcgatgctgc ttgccgtgtt aaaccgccac ggcggcatcg
     6241 cctgtttcga tcaggatgtg ttcctcaacg ccgtcggcgg cgtgaaaatc ggcgaaccgg
     6301 cggcggattt ggcggtcatc ctcgcgatgc tttccagctt ccgcaaccgc cctatgcctg
     6361 aaaaaaccgt ggttttcggc gaaatcggct taagcggcga agtccgcccc gtcgcacgcg
     6421 ggcaagagcg gctcaaagaa gcggaaaaac tcggcttcaa acgcgccatc gttcccaaag
     6481 ccaatatgcc gcgcaacgcc aaagagtttc cgaacctgaa aatctacggc gtttcgagtt
     6541 tgcaggaagc catcgatatt tgccgtgaca gcagggaata aacggaaatg ccgtctgaaa
     6601 tcaggtttca gacggcattt ggtttgtggc ggattgaaac aagaaggcat accggcgaca
     6661 gataagattt gcggcaaagt tgcctgtgat atggcaaaac gcacacgccc gtcatccccg
     6721 caagggcggg aatccggaat cgtccgtttc ggcaatgatt gaaaatcacg gtaacccaac
     6781 cgcttggatt cccgacttcg tgggaatgag gggcgtgtgt gtttgatttc catccgccat
     6841 atgtcggcga cgggcttatt cgcctacggt tttttgtatc agtttttcgg cgtttgccaa
     6901 agtgtttgcc acttcgtcaa aaccgatgcg gctgccggcg atgagggcgc gcgtatcggt
     6961 ataggcggcg cgtactttgc cgtctgtttc ggtaacgagg acgcgcaggg gcagttgcag
     7021 ggcgaaggcg gggtctttga ccatcagcgg cgtgccggct ttgggcgtgc cgaagacgat
     7081 gacttttgcc ggctgcatcg ttaagccgtt tcggtgggcg gcttcctgat ggtcgatgac
     7141 ggcaaaaatg tccatccctt tgctttttat ggcggtttca aggcggctga cggtttcgtc
     7201 aaaactgtat tttgaggtga gggtatgcgt ggtcatagcg gtttcgtttt gggtttgcgg
     7261 ttcgctggca ggatgtgccg aagcggttga aatgcagagt gcggatgcgg caatcagggg
     7321 gagtatgtgt ttcatcgtat ttcctttttc cttttcggtt tgtttatcag gcttcggacg
     7381 gggcggcacg cgccgcgccc gatgttgcgc cgcgtgctgg ggtgtcgtat gccgtctgaa
     7441 agcctgtcct ttcagacggc attgcgtcat ttcatccctt ttttgagcag gtcttcataa
     7501 ccgccgtgat tggcaacatt tgtataacct gcttttttca gctcctgaag ggcggctttg
     7561 gcacgccgtc cgctgcggca gtagaggttg accggcgtgt ctttgtcggg cgcggcttcg
     7621 tgtatgcggc ggacgatttg gtcgacgggg atgttgaccg cgttgtgcaa atgaccttcg
     7681 ctaaattcct gttcggaacg gacatcgatc caaacggccg gatgttgcgc ggtttgggcg
     7741 gcggataggg gtttttgcgg ggctgcctgc gcggcaaagg cggctgaggc aatgagtgcg
     7801 gcggtaatca ggtgtttgat attcataggg ttctcctgcg gttgtcgtct taagggacgg
     7861 gaagttattt tatctgttcc aaagcggcgg catctatgtc ccaacgccaa acgccgccgc
     7921 ctttgccatc caatccgcgc aaaaacaggt agcggacgga aacggcggcg ggcggttgtc
     7981 cgcgcagttt gaagtagcgt gcggcggcaa cggcgtaaat cagcgcctga aggtaatagt
     8041 ggtggtgcgc gacggcttcg tccatcgcct gttgcgtgta ggcggatgcg tccgcgccga
     8101 gatggtttga tttgtagtcg atgacgcaga tattgccgtc ggggtcttgg cagaccatat
     8161 cgataaagcc gtttaaaaag ccgttgacgg tgtggaagtc gagcgtttcg gcggcggcac
     8221 ggcagacttc gggcaatcgg atatcgtcgc gggcaaacca gtcgcgcagc cgtttgaggc
     8281 cgaagtcttc ggtgtggagg gtaaagccca tttcgggaca gcggcactcg ggcgggatgt
     8341 cggacaggca gtatgccccc gtcagcggcg ttttgcggca ggcttccgcc atttcggcaa
     8401 cggcaggcag ccatatttct tcaaatccgt attttttcag cttgtcggca atgagagttt
     8461 cctgtccggc ggctgcttgt ccgaatttga aatcttcaag aatttcgtgc aggcacagcc
     8521 ccgcctgcgt gcctttcgga aaatcgtgta tcgatatgcc gtctgaagcc gtcggcgttt
     8581 cagacggcat cgccggcacc gaggtttcgg cggcatccaa ggacgggcag gcatcttctt
     8641 cgccgccgtc gggcgtttgg gtatggcggc ttaaggcggt aaagctggtg tggcggacaa
     8701 atcggaatct gcgttcggga atgctgtttg cggcaaattc ggcggtttga ccggcgttgc
     8761 cgcgataggc ggcagggggc ggcgcatctt ctgtgaaggc gaaatccgtg ccggccgggg
     8821 cattgtccgt caaacgccgc cagttgcgtt tgagcatcgc gatgccgtct ttttcccggt
     8881 cataggtttg gcggacggtt tcgcggctgt cttgcggcaa gccttcaatc aggtaggcga
     8941 gggggttgtc ggcggtatcg gaagaatagg cggcgtagat gttgagctgt tcctcggcac
     9001 gcgtcagcgc gacataaagc aggcgcaggc gttccgccat ttcctcatcg gcgtattgct
     9061 tctgttcgtc ttccgacagt tgcgcctttg ccaacagttc ggttcgattt gcgctttggt
     9121 ggaggatttg ccagtcggac ggcccggtat cttgcgcgtc ccacgcaaac gggcagtaca
     9181 ccagcggata ctgcaaacct ttcgaggcgt gcatggtaac gattttgacc aaatcttcgt
     9241 cgctttccag acggatggcg cggttgtcgc cgctgttgtt gccggccagg ctgatttggt
     9301 cgcgcaacca tttgtgcagc gcggcggggt tgcggttttg cgcgtcttcg gcggcaagca
     9361 gttcgagcag ttggaaataa ttggtcaggc tgcgcccgtt gttccggctt aagaggcgcg
     9421 tttcgatgcc gtgtgtttgg gaaaattgct gcatggcggc gaaaatgccg tattgattcc
     9481 agttgtcgag cgcggttcgg gcagattccg cccaatgcaa aatctcgctt tcgttttggt
     9541 tgaagtcgtg caattgctgc gcgtcataac cgaatatgcc gcttgtcagg acaaagcgca
     9601 gcgttccggc gcggcgcggt tcgagccaga agccgatgag tgcggaaagg gcggtggctt
     9661 cgggcgaggc gaacacggat tcgcgcgaaa gcaggacgct ttgcacctgc cgttttttca
     9721 gggcagcgga aaccatcacc gcctcgttgt gcgtgcgtac cagcacggca atatcgcccg
     9781 actgcaacgg gcagcctttg aaattcagac ggcattcggc ggcttcgttg agcgcgtggg
     9841 cgatttcgtc ggcgcaatag tcggcggcac ggcggcgcaa aacgtctttg ttggcttttt
     9901 cattgtcgtt ttcgtgcagc caacgaacct gtacggcagg acgttcgggg gacaacctgc
     9961 tttcggcacg cgccgcaccg acttccgaat agccgatgtt ttccaaaacg aacgggcgtt
    10021 ctttgaggcg gaacagcgcg cctatgctgc cgataagcgc ggcgtggctg cggtagttgg
    10081 tggcgagcgt gtagcggtgc cgcgcgtctt ccgccgcctg aaggtaggcg taaatgtccg
    10141 ctccgcgaaa gctgtaaatc gcctgtttgg gatcgccgac gaggaacagc ggtcggtttt
    10201 gggcgatgaa gattttttgg aagatttcgt attgcagcgg gtcggtgtct tggaactcgt
    10261 cgatcagcgc ggtttcccag ttttcggcaa cggcgcgggc gagggtttcg gcgtgcggat
    10321 tgtcggtcag cgcggtgtgg acatcgagca gcaggtcgtc gaaaccgcgt tcgcggcgcg
    10381 attttttcat ctcggcaagg ctgcggttga ggtatccgat taaatccagt tgcagccgga
    10441 ttattgttgc ttcttccgct tcttcgagtg cgtccaaatc acgcctgaag tctgccagtt
    10501 tctgcaattc ggcaaatact gccgcatcgg gcgttttgcc ttttttcagt ccggcttcga
    10561 gtttgtcgga cgcaagtttc aagagccgtt cgtgcagctt tgcctccaaa aagggcaaat
    10621 ccggcgacag ggctttttgt tccaatgcgt caaacagttc ggcaaaactg tttttccgat
    10681 atgaattgcc gtttaaaagg ggatggatgc gccaaaaagt ttcttttaat tcagccagat
    10741 ttccgcaaat gttttgccag cttgccaaag cggcatcccg ggcttgcggc aaatcggttt
    10801 gcggacggcg gaaattcagg tacgggcggg acaggtaggc gcggatttgg gcaaggacgg
    10861 tttgcggcac agctttgcgt ttaaacgcca atgcggcaag caccggatca ttgctgacgc
    10921 gttcccgcca aaaatcttgc gccgggacaa gcaggcggtc gccgtcttct tcggtcagtt
    10981 cgacatcgaa cggtgcttgg cacaaaaacg cgtagtcgcg caggatgcgc tggcagaagc
    11041 cgtggatggt atagatggcg gcgttgtcga attgcccgat ggcggctttg aggcggacaa
    11101 tcagacgcgt ccggccctct ttttgcaaag cctgttttaa gagtgcgggc aggaaggtgt
    11161 cgcctttgtg gtgttcggcg cagtaggcgg cgatgccgtc tgaaagcgtg tcgtctccaa
    11221 gtttggcaat ttctttactt tctaaaacct gcaacacatc gtccaaacgt gcgcgcaggc
    11281 gtgttttcaa ctcggcggtg gcggctttgg tgaaggtaac gaccaatacg cgctcgacgt
    11341 ttttttgttc caatacgatc aggcgcgtaa acagggcggc aatgccgtag gtttttccgg
    11401 tgccggcaga ggcctcaatc aggttggtgc cggcaatggg gacggtcagc gggtcaaatg
    11461 cttggatggg tgcagacata gtgcgcgctc ggaaaacggt tggacggtat agtggattaa
    11521 caaaaatcag gat
//
LOCUS       DAWGKF010000055        11533 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.055, whole genome shotgun sequence.
ACCESSION   DAWGKF010000055 DAWGKF010000000
VERSION     DAWGKF010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11533)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11533)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11533
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.055"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(109..1152)
                     /locus_tag="WHR07_001025"
     CDS             complement(109..1152)
                     /locus_tag="WHR07_001025"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEZ2130247.1"
                     /translation="MSKKIKVGIVGATGYTGVELLRLLAAHPDVEVAAVTSRSEAGTA
                     VADYFPSLRGVYGLAFQTPDEAGLEQCDIVFFATPNGIAMKDAPRLIEQGVRVIDLSA
                     DFRIWDIPTWEHWYGMPHAAPGLVSQAVYGLSELNREAVAQARLVANPGCYPTCVSLP
                     LVPLLRQCRLKPGMPLIADCKSGVSGAGRKGNVGSLLCEVGDNFKAYGIAGHRHLPEI
                     RQTIAGLQDGIAEGFVFTPHLAPMIRGMHATVYLHLSDGICPETILRDYYRDSLFVDI
                     LPAGSTPETRSVRGANLCRISIQQAAQSDVWVVLSVIDNLVKGAAGQAVQNMNIMFGL
                     KETHGLGAIPLLP"
     gene            complement(1149..1430)
                     /locus_tag="WHR07_001026"
     CDS             complement(1149..1430)
                     /locus_tag="WHR07_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130248.1"
                     /translation="MKTLVLLLLSFSTTTAFAAYGLGLGQAPKYPAGFRAYGYVYSGR
                     QGWVLKTEADAIKLDTLFKRFVYRPSAANQNPVGQRSDGIPANHTKEKP"
     gene            1740..2840
                     /locus_tag="WHR07_001027"
     CDS             1740..2840
                     /locus_tag="WHR07_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEZ2130249.1"
                     /translation="MYQKPKLFKGAVRNLEAASWKDINEIYQRADPTAPLFYLRKKGA
                     IVPKEEYVESFDALGKTRYRFIKSVIYEHMKNGASLVYNHINNEPFSDHISRQVARLA
                     GAHTIVSGYLAFGSDESYKNHWDTRDVYAIQLFGKKRWQLTAPDFPMPLYMQQTKDTD
                     ISIPEHIDMDIILEAGDVLYIPRGWWHRPIPLGCETFHLAVGTFPPNGYNYLEWLMKK
                     FPTIESLRHSFSDWEQDRTRINDTAAQIAAMIADPVNYEAFSEDFLGKERTDTAFHLE
                     QFANPNATPLSDDVRLRLNANNLDTLEKGYLIGNGMKISVDELGKKVLEHIGKNEPLL
                     LKNLLVNFNQGKYEEVRKLIYQLIELDFLEIL"
     gene            3069..3422
                     /locus_tag="WHR07_001028"
     CDS             3069..3422
                     /locus_tag="WHR07_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130250.1"
                     /translation="MIELQLHELKLVSGGGPVTDNIAGNVANAATTKGGPTWGDLVAI
                     PAAAAAVYYLPKNAYGAAGANGVYNVTRDWVNDAVNAPPYNGRPIFEIEHGLTAPATK
                     ADKSGNGYTDGTDYC"
     gene            3483..4109
                     /locus_tag="WHR07_001029"
     CDS             3483..4109
                     /locus_tag="WHR07_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretion protein"
                     /protein_id="HEZ2130251.1"
                     /translation="MNRPKQPFFRPEVAVARQTSLTGKVILTRPLSFSLWTTFASISA
                     LLIILFLIFGNYTRKTTAEGQILPASGVIRVYAPDTGTITAKFVEDGEKVKAGDKLFA
                     LSTSRFGAGGSVQQQLKTEAVLKKTLAEQELGRLKLIHGNETRSLKATVERLENQKLH
                     ISQQIDGQKRRIRLAEDQWQKRHWADRNCRDWAWYPPIWRRATNLFIS"
     gene            4061..4261
                     /locus_tag="WHR07_001030"
     CDS             4061..4261
                     /locus_tag="WHR07_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130252.1"
                     /translation="MVSSYLAKSNEPVYLVKIKPDKPTITAYGEEKPLQIGMTLEADI
                     LHEKRRLYEWVLELIYSMSGKL"
     gene            4571..4873
                     /locus_tag="WHR07_001031"
     CDS             4571..4873
                     /locus_tag="WHR07_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130253.1"
                     /translation="MTWVGGSGNAQQSSYYCEICESAGLNDTGNPDKSLGLPNNTFSN
                     PPGWGATIGALAGSRIGMPEFGTFASHAIENFDWSWYRRYREIAETIEREYSGGLP"
     gene            5157..5396
                     /locus_tag="WHR07_001032"
     CDS             5157..5396
                     /locus_tag="WHR07_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEZ2130254.1"
                     /translation="MPHLQNLSLGLKKKLPVILQTEISECGLACLAAVAGFHGFHTNL
                     RALRSKYCPRPLQNSPKSPKCLGGNFGEFCKGLIL"
     gene            5457..7199
                     /gene="hrpB"
                     /locus_tag="WHR07_001033"
     CDS             5457..7199
                     /gene="hrpB"
                     /locus_tag="WHR07_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-partner secretion system transporter HrpB"
                     /protein_id="HEZ2130255.1"
                     /translation="MKFFPAPCLLVILAVIPLKTLAADENDAELIRSMQRQQHIDAEL
                     LTDANVRFEQPLEKNNYVLSEDETPCTRVNYISLDDKTARKFSFLPSVLMKETAFKTG
                     MCLGSNNLSRLQKAAQQILIVRGYLTSQAIIQPQNMDSGILKLRVSAGEIGDIRYEEK
                     RDGKSAEGSISTFNNKFPLYRNKILNLRDVEQGLENLRRLSSVKTDIQIIPSEEEGKS
                     DLQIKWQQNKPIRFSIGIDDAGGKTTGKYQGNVALSFDNPLGLSDLFYVSYGRGLAHK
                     TDLTDATGTETASGSRSYSVHYSVPVKKWLFSFNHNGHRYHEATEGYSVNYDYNGKQY
                     QSSLAAERMLWRNRLHKTSVGMKLWTRQTYKYIDDAEIEVQRRRSAGWEAELRHRAYL
                     NRWQLDGKLSYKRGTGMRQSMPAPEENGGDILPGTSRMKIITAGLDAAAPFILGKQQF
                     FYATAIQAQWNKTPLVAQDKLSIGSRYTVRGFDGEQSLFGERGFYWQNTLTWYFHPNH
                     QFYLGADYGRVSGESAQYVSGTQLMGAVVGFRGGHKVGGMFAYDLFAGKPLHKPKGFQ
                     TTNTVYGFNLNYSF"
     gene            7308..>11533
                     /locus_tag="WHR07_001034"
     CDS             7308..>11533
                     /locus_tag="WHR07_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HEZ2130256.1"
                     /translation="MNKGLHRIIFSKKHSTMVAVAETANSQGKGKQAGSSVSVSLKTS
                     GDLCGKLKTTLKTLVCSLVSLSMVLPAHAQITTDKSAPKNQQVVILKTNTGAPLVNIQ
                     TPNGRGLSHNRYTQFDVDAKGAVLNNDRNNNPFLAKGSAQLILNEVRGAASKLNGIVT
                     VGGQKADVIIANPNGITVNGGGFKNVGRGILTTGAPQIGKDGALTGFDVRQGTLTVGA
                     AGWNDKGGADYTGVLARAVALQGKLQGKNLAVSTGPQKVDYASGEISAGTAAGTKPTI
                     ALDTTALGGMYADSITLIANEKGVGVKNAGTLEAAKQLIVTSSGRIENSGRIATTADG
                     TEASPTYLSIETTEKGAAGTFISNGGRIESKGLLVIETGEDISLRNGAVVQNNGSRPA
                     TTVLNAGHNLVIESKTNVNNAKGSANLSAGGRTTINDATIQAGSSVYSSTKGDTELGE
                     NTRIIAENVTVLSNGSIGSAAVIEAKDTAHIESGKPLSLETSTVASNIRLNNGNIKGG
                     KQVVLMADGDIQAKASNLNASGHLYIHAGKDLDLNADKDLSTQSISLRADNTALISSN
                     GNTLTAEKNLDIQAGSLSVRQSNLQSSGGNVQMSATKGNISLNQSWINASQNIDTAAL
                     QGNIISDGLTAVAEVGRVSLLANGNVDFNGLNTLIAEGDINAGSVGKGRLKMDNTDIY
                     ASAGDVKLVAGGQLDLGNGTVNGGHISLDSNKGSMVVQDVHLNARASLKVDADQTLTI
                     NNSKLNSGHNTQINTNHGHMTLNQLDAHSRRHMSISAQGKGKGKDSGQILQNDQQNSK
                     STLAADGVLSLNSSALQVLDNTTLRGGAINIKAGGGIIKRGYIDWETQDTATMRSAEL
                     KPLSGMMSIESGGDNPLTVEPGNRIVSAGDLAVNHNGTFQISARAGNNGNPSAQTASV
                     SAKGNIGIVAGEVDIDAANIAAGKDLALVATKGNISLNSIRNTFSNYQLKTDKHNITQ
                     QLTDVEQELSKLTSDPKYRKAQDLPQMLRRKYKRRDKVFGDSEARLRGLRAEINAADE
                     AWAELQSPVKALLERKQLLQQALLTVSQPGSGHENQGSTLSGQNIKLLAAGGIRIQGS
                     KVAATQQANIQAAGFLPAPAAEELQEGRLQSAIDISGVFDTFEYGQQGSDKYGYAIFS
                     RPSEISGKTGVTLSAPNANENSRISLSAANIEAENGKIKLQSYGDQSYYAGQGELYTL
                     ERRSYKTGKWYNRKHITEVKEHKNAKPDAVNLSASQGIDIKSGGNIDAYATAFDAPKG
                     SINIEAGRKLTLYAVEELNYDKLDSQKRRRFLGISYSKAHDTTTQVMKTALPSRVVAE
                     SANLQSGWDTKLQGTQFETTLGGATIRAGVGEQARADAKIILEGIKSSIHTETVSSSK
                     STLWQKQAGRGSNIETLQLPSFTGPVAPVLS"
BASE COUNT         3290 a         2646 c         2818 g         2779 t
ORIGIN      
        1 tttcgtggga atggatgggc ccaaagccgt ccgaaccaaa aaaaaccgcc gctttcagac
       61 ggcatcaaaa aaccgcaggc acgatgcctg cggtttgccg tttgcgcttc aggggagcag
      121 ggggattgcg cccaagccgt gtgtttcttt cagtccgaac atgatgttca tattttgcac
      181 cgcctgaccc gccgcgcctt tgacgaggtt gtcgatgacg gaaaggacga cccacacatc
      241 ggattgcgcc gcctgttgga tgctgatgcg gcagaggttt gcgccgcgca cgctgcgggt
      301 ttctggtgtc gaaccggcgg gcaggatgtc cacgaacagg ctgtcgcggt aatagtcgcg
      361 caggatggtt tcggggcaga tgccgtctga aaggtggagg taaacggtgg cgtgcatacc
      421 gcgtatcatc ggcgcgaggt gcggcgtgaa cacgaatcct tcggcgatgc cgtcctgaag
      481 cccggcgatg gtctgcctga tttcgggcag gtggcggtgt ccggctatgc cgtaggcttt
      541 gaagttgtcg ccgacttcgc acaacagcga accgacattg cctttcctgc ccgcgccgga
      601 cacgccggat ttgcagtcgg caatcagcgg cataccgggc ttcagacggc attgccgcaa
      661 cagcggcacg agcggcaggg atacgcaggt cgggtagcag ccggggttgg cgacgaggcg
      721 cgcctgtgcg acggcttcgc ggttgagttc gctcaatccg tacacggctt gggaaacgag
      781 gccgggggcg gcgtggggca tgccgtacca gtgttcccag gtcggaatgt cccatatgcg
      841 gaagtcggcg gaaaggtcga tgacgcgcac gccctgttca atcaggcgcg gcgcgtcttt
      901 catggcgatg ccgttgggcg tggcgaagaa gacgatgtcg cattgttcca aacctgcctc
      961 gtcgggcgtt tggaaggcga ggccgtacac gccgcgcaaa ctcggaaagt aatcggcaac
     1021 tgcggttccc gcttcgctgc ggctggttac ggcggcgact tcgacatcgg gatgggcggc
     1081 aagcaggcgc agcagttcca cgccggtgta gcccgtcgcg ccgacaatgc cgactttgat
     1141 ttttttactc atggtttttc ctttgtgtgg ttggcgggta tgccgtccga acgctgtccg
     1201 acggggtttt gattggcggc ggaaggacgg tacacaaagc gtttgaaaag cgtgtctaat
     1261 ttaatggcat ccgcctctgt ttttaaaacc cagccctgcc gtccggaata aacataaccg
     1321 taggcgcgaa agccggcagg atatttcggt gcctgcccca aacccaaacc gtatgcggcg
     1381 aaagcggtgg tcgtggagaa ggaaagcagg aggaggacga gggttttcat aaggttccaa
     1441 accgaacggg gcgatgaagc ccgattatag caaaaggtcg tctgaaaacc gttttcagac
     1501 gaccttttat ttaattacaa taaaaatgtt aacaacaaaa aacaaaccgc ttttttccgt
     1561 ttggagacaa atttttaact aaaattgtca acaattcctt gacgcacaca caaaaaaaaa
     1621 ctttaatatt tgtaaatata tgtaacatta taaattttaa atattttctg agtaagggga
     1681 agtaatgagc atccatctcg acttcggcat tagtcctaaa acgttccgac agacttaatc
     1741 tgtatcaaaa gcccaagctc tttaaaggag cggttcggaa tctcgaagcc gcatcttgga
     1801 aagatatcaa cgagatatac caacgagcag acccaaccgc accgctgttt tatctgcgta
     1861 aaaaaggtgc aattgttcct aaagaagaat acgtcgaaag tttcgacgct ttgggcaaaa
     1921 ctcgctaccg ttttattaaa tccgttatct acgaacatat gaagaatggt gcgtcgttag
     1981 tctataacca tattaacaac gagccgtttt cagatcatat ttcccgtcaa gtcgcccgcc
     2041 ttgccggcgc acatactatt gttagtgggt atcttgcttt tggcagcgac gaatcttata
     2101 aaaaccattg ggacacccgc gatgtgtatg ccatccagct tttcggcaag aaacgttggc
     2161 aacttactgc ccctgatttc cctatgccat tgtatatgca acagactaaa gatactgata
     2221 tttccattcc tgaacatatc gatatggata ttatccttga agcaggtgat gtcctctaca
     2281 tcccgcgcgg ttggtggcac agacctatcc cgctcggctg tgaaaccttc cacctcgctg
     2341 tcggtacctt tccgcccaac ggctataatt acctcgagtg gctaatgaag aaattcccca
     2401 ccatagaaag tctgcgccac agtttctcag actgggagca agataggacg cgtatcaacg
     2461 atactgccgc acaaattgct gccatgattg ccgaccccgt caattatgaa gccttcagtg
     2521 aagactttct cggcaaagaa cgtaccgata ccgcttttca tctcgaacag ttcgcgaatc
     2581 ccaacgctac tccgctttca gacgacgtca ggttgagatt aaatgccaat aatttggata
     2641 cgttggaaaa gggatatttg attgggaatg ggatgaagat aagcgtagat gagttgggga
     2701 aaaaagtttt agaacacatc ggtaagaatg aaccgttatt gttgaaaaat ctactggtta
     2761 acttcaatca gggaaaatat gaagaagtta ggaagttgat ttatcagttg atagagttag
     2821 attttctgga aattttgtga gggattctat gaaaaactgg aagcaattta catttttcgt
     2881 aatattagta atagcttgtt atcaagtgct atatttttta tcagatatgt ttcttctcga
     2941 ctacattaac aaatatagtt ggaatttgaa ttttattcag ggtactttga attttttttc
     3001 aatatatctg ccatatgttt ttgttagccg aatttttagg aataccaacc aagaaaagga
     3061 gtataaaaat gattgaactt caacttcatg aattgaagct ggtttcaggg ggaggtcctg
     3121 taacagacaa tatagctgga aatgtagcta atgctgccac aaccaaagga ggtcccacat
     3181 ggggggattt ggttgcaata cctgctgccg cagcggcagt ttattatctg ccgaaaaatg
     3241 cttacggtgc tgctggtgca aatggtgtat acaatgtgac tcgtgattgg gtaaatgatg
     3301 ccgttaatgc acctccttat aacggaagac caatctttga gattgaacat ggattaactg
     3361 ctcccgcaac aaaagcagat aaatcaggaa acggctacac tgacggtaca gattactgct
     3421 gatatttctc attgttcaga cgatctctag gggtcgtctg aaactttctt aacttcaatt
     3481 ttatgaatag acccaagcaa cccttcttcc gtcccgaagt cgccgttgcc cgccaaacca
     3541 gcctgacggg taaagtgatt ctgacacgac cgttgtcatt ttccctatgg acgacatttg
     3601 catcgatatc tgcgttattg attatcctgt ttttgatatt tggtaactat acgcgaaaga
     3661 caacagcgga gggacaaatt ttacctgcat caggcgtaat cagggtgtat gcaccggata
     3721 cggggacaat tacagcgaaa ttcgtggaag atggagaaaa ggttaaggct ggcgacaagc
     3781 tatttgcgct ttcgacctca cgtttcggcg caggaggtag cgtgcagcag cagttgaaaa
     3841 cggaggcagt tttgaagaaa acgttggcag aacaggaact gggtcgtctg aagctgatac
     3901 acgggaatga aacgcgcagc cttaaagcaa ctgtcgaacg tttggaaaac cagaaactcc
     3961 atatttcgca acagatagac ggtcagaaaa ggcgcattag acttgcggaa gatcagtggc
     4021 aaaaacggca ctgggcagac aggaattgtc gggattgggc atggtatcct cctatttggc
     4081 gaagagcaac gaacctgttt atctcgtgaa aataaaaccc gacaaaccaa ccatcactgc
     4141 atacggtgag gaaaaaccgc tgcaaatcgg catgacgttg gaagcagaca tcctgcacga
     4201 gaaacggcgg ctgtacgaat gggtattgga gctgatttat agtatgtcgg gcaaactgta
     4261 agacttgagg ctgaaagata aagaagttgt ctgaaacctt ttcagacgac cagaagacaa
     4321 taaaaaacac aaacttcaaa actgcctgaa accatcccct tttacaggca ctccgtttgt
     4381 aaaagcaagg atagggcatc tgcccttttg attgtttgat taacgataca aggagtttca
     4441 aaatgagagt tttatagtgg attaacaaaa accagtacag cgttgcctcg ccttgccgta
     4501 ccatttgtac tgtctgcggc ttcgtcgcct tgtcctgatt taaatttaat ccactatatg
     4561 tgttcatgaa atgacttggg tcggaggctc aggtaatgcg caacaaagct catattattg
     4621 cgaaatttgc gaatctgcag ggcttaacga tacgggaaat cctgataaat ctttaggatt
     4681 gccaaacaat acgttcagta atccgcctgg ttggggagct acaatcggag ctttagcagg
     4741 tagccgcata gggatgcctg aatttggtac gtttgcgagc catgccattg aaaatttcga
     4801 ctggtcatgg tatcgacgtt atagggaaat tgccgaaacg attgaacgag aatattcagg
     4861 cggtttgcct taatagttga ggaggtcatg atgtttgcca aacattatca attcatcgca
     4921 ctcggcatca tgctgcttct ttatatgttg attctctata cgaccgattt ttccaatctg
     4981 acgtattgga tgctgttttt tatctgtttt attacaggaa aaatattagc tcgtttgtta
     5041 gagaaaagct ttaaataaaa tagcagctag tcgcaaaagg tcgtctgaaa ccttttcagg
     5101 cggcctttct aaaatacatc caacttccta atccctattt ttcaaaaagg aaatctatgc
     5161 cccatctgca aaacctgtct ttgggcttaa agaaaaagct gcctgttatc ctgcaaacag
     5221 aaatatcaga atgcggcttg gcatgtctgg cggctgtggc gggatttcat ggtttccata
     5281 cgaatttacg cgcactgcgt tcaaaatact gtccgagacc tttgcaaaat tccccaaaat
     5341 cccctaaatg tcttggtggg aattttgggg aattttgcaa aggtctcatt ctataactgt
     5401 aaatactttt aaatttatga caaaatagta aatattgcta aaataatatt gatgtcatga
     5461 aattttttcc tgctccatgt ctgttggtta tcctggctgt catacccctt aaaaccttag
     5521 ctgccgatga aaacgatgca gaacttatcc gttccatgca gcgtcagcag cacatagatg
     5581 ctgaattgtt aactgatgca aatgtccgtt tcgagcaacc attggagaag aacaattatg
     5641 tcctgagtga agatgaaaca ccgtgtactc gggtaaatta cattagttta gatgataaga
     5701 cggcgcgcaa attttctttt cttccttctg tgctcatgaa agaaacagct tttaaaactg
     5761 ggatgtgttt aggttccaat aatttgagca ggctacaaaa agctgcgcaa cagatactga
     5821 tcgtgcgtgg ctacctcact tcccaagcta ttatccaacc acagaatatg gattcgggaa
     5881 ttctgaaatt acgggtatca gcaggcgaaa taggggatat ccgctatgaa gaaaaacggg
     5941 atgggaagtc tgccgaaggc agtattagta cattcaataa caaatttccc ttatatagga
     6001 acaaaattct caatcttcgc gatgtagagc agggcttgga aaacctgcgt cgtttgtcga
     6061 gtgttaaaac agatattcag attataccgt ccgaagaaga aggcaaaagc gatttacaga
     6121 tcaaatggca gcagaataaa cccatacggt tcagtatcgg tatagatgat gcgggcggca
     6181 aaacgaccgg caaatatcaa ggaaatgtcg ctttatcgtt cgataaccct ttgggcttaa
     6241 gcgatttgtt ttatgtttca tatggacgcg gtttggcgca caaaacggac ttgactgatg
     6301 ccaccggtac ggaaactgca agcggatcca gaagttacag cgtgcattat tcggtgcccg
     6361 taaaaaaatg gctgttttct tttaatcaca atggacatcg ttaccacgaa gcaaccgaag
     6421 gctattccgt caattacgat tacaacggca aacaatatca gagcagcctg gccgccgagc
     6481 gcatgctttg gcgtaacaga cttcataaaa cttcagtcgg aatgaaatta tggacacgcc
     6541 aaacctataa atacatcgac gatgccgaaa tcgaagtgca acgccgccgc tctgcaggct
     6601 gggaagccga attgcgccac cgtgcttacc tcaaccgttg gcagcttgac ggcaagttgt
     6661 cttacaaacg cgggaccggc atgcgccaaa gtatgcctgc accggaagaa aacggcggcg
     6721 atattcttcc aggtacatct cgtatgaaaa tcattactgc cggtttggac gcagccgccc
     6781 catttatttt aggcaaacag cagtttttct acgcaaccgc cattcaagct caatggaaca
     6841 aaacgccgtt ggttgcccaa gataaattgt caatcggcag ccgctacacc gttcgcggat
     6901 ttgatgggga gcagagtctt ttcggagagc gaggtttcta ctggcagaat actttaactt
     6961 ggtattttca tccgaaccat cagttctatc tcggtgcgga ctatggccgc gtatctggcg
     7021 aaagtgcaca atatgtatcg ggcacgcagc tgatgggtgc agtggtcggc ttcagaggag
     7081 ggcataaagt aggcggtatg tttgcttatg atctgtttgc cggcaagccg cttcataaac
     7141 ccaaaggctt tcagacgacc aacaccgttt acggcttcaa cttgaattac agtttctaac
     7201 ctctgaattt tttactgata tttagacggt ctttccttat cctcagaccg tcaaacttta
     7261 cctacgtact tggcgcgcag tacgttcatc ttcaaaatgg aatagacatg aataaaggtt
     7321 tacatcgcat tatctttagt aaaaagcaca gcaccatggt tgcagtagcc gaaactgcca
     7381 acagccaggg caaaggtaaa caggcaggca gttcggtttc tgtttcactg aaaacttcag
     7441 gcgacctttg cggcaaactc aaaaccaccc ttaaaacctt ggtctgctct ttggtttccc
     7501 tgagtatggt attgcctgcc catgcccaaa ttaccaccga caaatcagca cctaaaaacc
     7561 agcaggtcgt tatccttaaa accaacactg gtgccccctt ggtgaatatc caaactccga
     7621 atggacgcgg attgagccac aaccgctata cgcagtttga tgtcgacgct aaaggtgctg
     7681 tactgaacaa cgatcgcaac aacaacccgt ttctggccaa aggcagtgcg cagttgattt
     7741 tgaacgaggt gcgcggtgcg gccagcaaac tcaatggcat cgttaccgta ggtggtcaaa
     7801 aggccgatgt gattatcgcc aaccccaacg gcattaccgt gaacggcggc ggctttaaaa
     7861 acgtcggccg cggtatctta actaccggtg cgccccaaat cggcaaagac ggtgcactga
     7921 caggatttga tgtgcgtcaa ggcacattga ccgtaggagc agcaggttgg aatgataaag
     7981 gcggagccga ctacaccggg gtacttgctc gtgcagttgc tttgcagggg aaattacagg
     8041 gtaaaaacct ggcggtttct accggtcctc agaaagtaga ttacgccagc ggcgaaatca
     8101 gtgcaggtac ggcagcgggt acgaaaccga ctattgccct tgatactacc gcactgggcg
     8161 gtatgtacgc agacagcatc acactgattg ccaatgaaaa aggcgtaggc gtcaaaaatg
     8221 ccggcacact cgaagcggcc aagcaattga ttgtgacttc gtcaggccgc attgaaaaca
     8281 gcggccgcat cgccaccact gccgacggca ccgaagcttc accgacttat ctctccatcg
     8341 aaaccaccga aaaaggagcg gcaggcacat ttatctccaa tggtggtcgg atcgagagca
     8401 aaggcttatt ggttattgag acgggagaag atatcagctt gcgtaacgga gccgtggtgc
     8461 agaataacgg cagtcgccca gctaccacgg tattaaatgc tggtcataat ttggtgattg
     8521 agagtaaaac taatgtgaac aatgccaaag gctcggctaa tctgtcggcc ggcggtcgta
     8581 ctacgatcaa tgatgctact attcaagcgg gcagttccgt gtacagctcc accaaaggcg
     8641 atactgaatt gggtgaaaat acccgtatta ttgctgaaaa cgtaaccgta ttgtccaacg
     8701 gcagtattgg cagtgctgct gtaattgagg ctaaagacac tgcacacatt gaatcgggca
     8761 aaccgctttc tttagaaacc tcgaccgttg cctccaacat ccgtttgaac aacggtaaca
     8821 ttaaaggcgg aaagcaggtg gtactgatgg ctgatggcga cattcaggca aaagcctcca
     8881 atctgaatgc atccggccat ctgtatattc atgcaggtaa ggatctggat ttgaatgccg
     8941 ataaagactt atcaacacaa agtatcagcc tgagggcaga caacaccgcc ctcatcagta
     9001 gcaacggtaa caccttgact gcagaaaaga atctggatat tcaggcaggt agcttgagtg
     9061 tgcgtcaaag taatctgcaa tccagtggcg gtaatgtgca gatgagcgcg actaaaggca
     9121 acatcagctt gaatcagagt tggataaatg ccagtcagaa tattgatacg gcagcacttc
     9181 aaggcaatat tatttcagac ggtctgactg ctgttgccga agttggacgc gtatctcttc
     9241 ttgccaacgg caatgttgat ttcaacggtc taaatacctt gattgcggaa ggagacatta
     9301 atgctggttc agtcggtaaa ggccgtctga aaatggacaa taccgatatt tatgcttctg
     9361 caggcgatgt gaaactggtt gccggaggtc aattagattt aggcaacggc accgttaacg
     9421 gcggtcatat cagcttagac agcaataaag gcagcatggt ggtgcaggat gtacacctga
     9481 atgcccgcgc atcactgaaa gtggatgcgg atcaaacttt aaccattaat aacagcaagc
     9541 tcaattccgg tcacaatacc cagattaata caaatcatgg tcatatgacg cttaatcagc
     9601 ttgatgctca ttcacgtcgt catatgagta tcagtgcaca gggtaaaggc aaaggaaaag
     9661 acagcggtca aattttacaa aacgaccagc aaaacagtaa aagtactttg gcggcagatg
     9721 gtgtattgtc attgaacagc agcgcattac aggttttgga caatactacc ctgcgcggtg
     9781 gcgcgataaa catcaaagct ggcggaggca tcatcaaacg gggctatatc gattgggaaa
     9841 cccaagatac ggctactatg cgttcagcgg aactgaaacc actgtctggt atgatgtcga
     9901 tagaatcggg cggtgataac cctttaaccg ttgaacccgg taaccgtatc gtttctgcag
     9961 gtgatttggc cgtgaaccac aacggcacat tccaaatcag tgccagagca ggaaataacg
    10021 gcaatccgag tgcgcaaaca gccagcgttt cagctaaagg caatatcggg attgtggcgg
    10081 gagaggtgga tattgatgca gcaaatattg ccgcagggaa agatttggct ttagtggcaa
    10141 ctaaagggaa tatttcacta aacagtatta ggaatacgtt tagtaactat caattgaaaa
    10201 cagataaaca caatatcaca cagcaactta ctgatgtaga gcaggagctt agtaagttaa
    10261 cgagcgatcc taaatatcgt aaagcacagg atcttccaca aatgttgagg cgtaaatata
    10321 agaggcgtga caaagtattc ggtgatagtg aggccagatt acgtggttta cgagcagaga
    10381 taaatgctgc tgatgaggct tgggcagaac tccaatcccc agtaaaagcg ttacttgaac
    10441 gtaaacaatt gttacaacaa gcccttttaa cagtttccca accgggtagt ggtcacgaaa
    10501 accaaggtag cacccttagc ggtcaaaata tcaaactgct cgctgcaggt ggtatccgta
    10561 tccagggctc caaagttgct gccacccaac aggcaaatat ccaagctgca ggatttttac
    10621 ctgcaccagc cgcagaggaa ctgcaagaag gtcgacttca atcagccatt gacatcagcg
    10681 gtgtatttga tacttttgaa tatggtcagc aaggcagcga taaatacggc tatgccattt
    10741 tcagcaggcc atctgaaatt tcaggaaaaa caggtgttac cctctctgca ccaaatgcca
    10801 atgagaacag ccgcatcagt ctgagtgcgg caaacatcga agctgaaaac ggcaaaatca
    10861 aactgcaatc ctacggcgac caatcctatt acgccgggca gggcgaactc tataccttag
    10921 aacgccgcag ctacaaaacc ggcaaatggt acaaccgcaa acacattacc gaagtcaaag
    10981 aacacaaaaa cgccaagccc gacgcagtaa acctcagcgc atcccaaggc atcgacatca
    11041 aatctggtgg caacatcgac gcctacgcca ccgcattcga tgcccccaaa ggcagcatta
    11101 acatcgaagc cgggcggaaa ttgacactct atgccgtaga agagctcaac tacgacaaac
    11161 ttgacagcca aaaaaggcgc agatttctcg gcatcagcta cagcaaagca cacgacacca
    11221 ccacccaagt catgaaaacc gcgctgccct caagggtagt tgcagaatca gccaacctcc
    11281 aatcgggctg ggataccaaa ctgcaaggca cacagtttga aaccacactg ggtggcgcaa
    11341 ccatacgcgc aggcgtaggc gagcaggcac gggcagatgc caagattatc ctcgaaggga
    11401 tcaaaagcag catccacaca gaaaccgtga gcagcagcaa atctactcta tggcaaaaac
    11461 aggcaggacg gggcagtaac atcgaaacct tgcaattgcc gagtttcacc ggtcccgttg
    11521 cgcccgtact gtc
//
LOCUS       DAWGKF010000056        11462 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.056, whole genome shotgun sequence.
ACCESSION   DAWGKF010000056 DAWGKF010000000
VERSION     DAWGKF010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11462)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11462)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11462
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.056"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            122..1507
                     /locus_tag="WHR07_001035"
     CDS             122..1507
                     /locus_tag="WHR07_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HEZ2130257.1"
                     /translation="MDGWTQTLSAQTLLGISAAAIILILILIVKFRIHALLTLVIVSL
                     LTALATGLPTGSIVNDVLVKNFGGTLGGVALLVGLGAMLGRLVETSGGAQSLADALIR
                     MFGEKRAPFALGVASLIFGFPIFFDAGLIVMLPIVFATARRMKQDVLPFALASIGAFS
                     VMHVFLPPHPGPIAASEFYGANIGQVLILGLPTAFITWYFSGYMLGKVLGRTIHVPVP
                     ELLSGGTQDNDLPKEPAKAGTVVAIMLIPMLLIFLNTGVSALISEKLVSADETWVQTA
                     KIIGSTPIALLISVLVALFVLGRKRGESGSALEKTVDGALAPVCSVILITGAGGMFGG
                     VLRASGIGKALADSMADLGIPVLLGCFLVALALRIAQGSATVALTTAAALMAPAVAAA
                     GFTDWQLACIVLATAAGSVGCSHFNDSGFWLVGRLLDMDVPTTLKTWTVNQTLIALIG
                     FALSALLFAIV"
     gene            1527..2045
                     /locus_tag="WHR07_001036"
     CDS             1527..2045
                     /locus_tag="WHR07_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HEZ2130258.1"
                     /translation="MTTHFVVMGVCGCGKTTAALSLQKHLGQCPYAEGDEFHTQANRD
                     KMGAGIPLTDEDRYPWLGNLRDWMTQQAQNGANHTIVTCSALKRGYRDILRGAEGKAA
                     FIHLSPPQDINLERMMSRKGHYMKAGMLDSQLEILEELGEGEYGVKIANPGTPEAVEA
                     DILNWVASENLL"
     gene            complement(2297..3214)
                     /gene="thrB"
                     /locus_tag="WHR07_001037"
     CDS             complement(2297..3214)
                     /gene="thrB"
                     /locus_tag="WHR07_001037"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEZ2130259.1"
                     /translation="MSVYTSVSDDEMRGFLSGYDLGEFVSLQGIAQGITNSNYFLTTT
                     SGRYVLTVFEVLKQEELPFFLELNRHLSMKGVAVAAPVARKDGRLDSVLAGKPACLVA
                     CLKGSDTALPTAEQCFHTGAMLAKMHLVAADFPLEMENPRYDAWWTEACARLLPVLSQ
                     DDAALLCSEIDALKDNLGNHLPSGIIHADLFKDNVLLDGGQVSGFIDFYYACRGNFMY
                     DLAIAVNDWARTADNKLDEALKKAFIGGYEGVRPLSAEEKAYFPTAQRAGCIRFWVSR
                     LLDFHFPQAGEMTFIKDPNAFRNLLLSLD"
     gene            complement(3251..3979)
                     /gene="ubiG"
                     /locus_tag="WHR07_001038"
     CDS             complement(3251..3979)
                     /gene="ubiG"
                     /locus_tag="WHR07_001038"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HEZ2130260.1"
                     /translation="MGGKMSDKKYNVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLR
                     LDYIDGHADLCGKRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALNN
                     VADIEYECIRVEDLAEAEPHSFDVVTCMEMMEHVPDPAAIVRACANLVKPDGMVFFST
                     INKNPKSYLHLIVAAEYLLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYH
                     VLSQTYALCDSTDVNYMFACRPAF"
     gene            4131..5372
                     /locus_tag="WHR07_001039"
     CDS             4131..5372
                     /locus_tag="WHR07_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235268.1"
                     /note="tryptophan transporter of high affinity; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan permease"
                     /protein_id="HEZ2130261.1"
                     /translation="MPTKTPSLFGCAMIIAGTVIGAGMLANPTATSGVWFTGSLAVLL
                     YTWFSMLSSGLMILEVNTHYPHGASFDTMVKDLLGRGWNIINGIAVAFVLYLLTYAYI
                     FVGGDLTAKGIGNALGGNVSLTVGQLVFFGILAFCVWASARLVDRFTSVLIGGMVLTF
                     IWATGGLIADAKMPVLFDTQAPAGTGYWIYAATALPVCLASFGFHGNVSSLLKYFKGD
                     APKVAKSIWMGTLIALVIYVLWQTAIQGNLPRNEFAPVIAAEGQVSVLIETLSKFAQT
                     GNMDKILSLFSYMAIATSFLGVTLGLFDYIADIFKWNDSVSGRTKTAALTFLPPLISC
                     LLFPTGFVTAIGYVGLAATVWTGIIPAMLLYRSRKKFGAGKTYKVYGGLWLMVWVFLF
                     GIVNIAAQVLSQMELVPVFKG"
     gene            5430..6485
                     /locus_tag="WHR07_001040"
     CDS             5430..6485
                     /locus_tag="WHR07_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ2130262.1"
                     /translation="MELKIDIATNNFKHGGGTERYTLDLVKGLNRQNITPAVYATKFD
                     HGIPEYAMIEPHLVDQHRTLKKLRSFLFSSRLAQTRKNSAAKLIACHHADYADLLICG
                     GTHLGYLHHMAQKPNLLDRLAIRRNRSNYATAKLIMAHSHMMRRELVGLYGVPPERIQ
                     VAPPPADTERFFPQPGETADLRAKYGFADHETVFLFPSTGHTRKGLELLADFFEHTGL
                     PVKLAVVGSPLPRPMKNVVGLGFCTDMPELYRAADFTIMASLYEPFGLVGVESVLCGT
                     RVVLSENMACTEVMNEEAGFFFSRQNPETLAQAVAQAVSLKKQGGHRLSDPMRALNYN
                     PSLSHHIDRLTDILASV"
     gene            complement(6552..8204)
                     /locus_tag="WHR07_001041"
     CDS             complement(6552..8204)
                     /locus_tag="WHR07_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HEZ2130263.1"
                     /translation="MVAYVFLFLFVTAALVLIIRSHYRWTYFFASALFVFLAGGMLML
                     TAQWQRALNFASVWFVVLILFHRLKIHYYKQPLLISDFLLIADWRNWETLFHYKEAVI
                     GMAGLLALAAYAVFGWSGADALGLPWRWAGTVLFAAAFVSMRHFSKHPGAVKTWLDSL
                     PDDGRDVFLNLPMSCRAVFFQVPVFEGDGEAFAKQMPSETQPYGMSDEKPDIVVTLME
                     STLDPHCFDFAAAKIPDLKMFGRQEDTVFSSPLRVHTFGGATWKSEFAFLAGVPSTDF
                     GALASGVFYSVVPHLQTGFVRNLREHGYFCVALSPFTKGNYNAKAAYDHFGFNLMFQP
                     QDLGYPAPMGKNLWHISSEEMMQYARMILEKRHPDLENVRQPMFVYVLTMKEHGPYRT
                     DTDNVFDLDVPDLNAKTVSALNDYIGRIADLDKAVESFDRYLHERGKPFVFGYFGDHQ
                     VPFEGVSVRKKWDYAQPDYVTQFAVRSNIAGGFVQRQDFLDLAFAGGVLMEAAGLEAK
                     DGFMRANMAMRGLCGGGLEDCPNRKLVGDYRNYLYDVLKIAS"
     gene            8374..8944
                     /locus_tag="WHR07_001042"
                     /pseudo
     CDS             8374..8944
                     /locus_tag="WHR07_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226786.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
     gene            8941..9504
                     /gene="gmhB"
                     /locus_tag="WHR07_001043"
     CDS             8941..9504
                     /gene="gmhB"
                     /locus_tag="WHR07_001043"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HEZ2130264.1"
                     /translation="MKLIILDRDGVINQDRDDFVKSVDEWIPVEGSMDAVAFLTQAGY
                     TVAVATNQSGIGRKYFTVQNLTEMHAKMHRLVRQAGGEINGIWFCPHTDADNCNCRKP
                     KPGMIEDIIGRFNAQASETWLVGDSLRDLQAIDAVGGKPALVLTGKGKKTLSQHGHEL
                     PEHTQVFDTLLDFSQYIMQENTAPQAD"
     gene            9533..10276
                     /locus_tag="WHR07_001044"
     CDS             9533..10276
                     /locus_tag="WHR07_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEZ2130265.1"
                     /translation="MLIIRNLIYWLILCSTLIFLFPFMLLASPFRDGAHKMARVWVKI
                     LNLSLKHIVGLKYRIIGAENIPDRPAVICAKHQSGWETLALQDIFPPQVYVAKRELFK
                     IPFFGWGLKLVKTIGIDRNNRREANEQLIKQGLARKNEGYWITIFPEGTRLAPGKRGK
                     YKLGGARMAKMFEMDIVPVALNSGEFWPKNSFLKYPGEITVVICPTIPHASGSEAELM
                     GKCEHLIETQQPLISGAGPFAAKMPSETA"
     gene            10273..10965
                     /locus_tag="WHR07_001045"
     CDS             10273..10965
                     /locus_tag="WHR07_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEZ2130266.1"
                     /translation="MTAFVHTLSDGMELTVEIKRRAKKNLIIRPAGTHTVRISVPPCF
                     SVSALNRWLYENEAVLRQTLAKTPPPQTAENRLPESILFHGRQLALTAHQDTQILLMP
                     SEIRVPEGAPEKQLALLRDFLERQAHSYLIPRLERHARTTQLFPASSSLTSAKTFWGV
                     CRKTTGIRFNWRLVGAPEYVADYVCIHELCHLAHADHSRAFWALTRRFAPYTPEAKQW
                     LKIHGRELFALG"
     gene            11076..11261
                     /locus_tag="WHR07_001046"
     CDS             11076..11261
                     /locus_tag="WHR07_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130267.1"
                     /translation="MPEQARARPIQTAMTLCRRFGAGWRHTRRLPRFISHRPSETRNP
                     PGPTCGMKRLSWREVFY"
BASE COUNT         2784 a         3520 c         2744 g         2414 t
ORIGIN      
        1 ttcaaataaa caggaatata acttcagaca aacaacttac cgcccgattt gtgctatcgt
       61 tttcgcacaa cttaaaaaac ctgacaattt tgtactttta ttacagagaa aggctttaca
      121 aatggacggc tggacacaga cgctgtccgc gcaaaccctg ttgggcattt cggcggcggc
      181 aatcatcctc attctgattt taatcgtcaa attccgcatc cacgcgctgc tgacactggt
      241 catcgtcagc ctgctgacgg ctttggcaac cggtttgccc acaggcagca ttgtcaacga
      301 cgtactggtc aaaaacttcg gcggcacgct cggcggcgtg gcgcttctgg tcggcctggg
      361 cgcaatgctc ggacgtttgg tcgaaacatc cggcggcgca cagtcgctgg cggacgcgct
      421 gatccggatg ttcggcgaaa aacgcgcacc gttcgcgctg ggcgttgcct cgctgatttt
      481 cggcttcccg attttcttcg atgccggact aatcgtcatg ctgcccatcg tgttcgccac
      541 cgcacggcgc atgaaacagg acgtactgcc cttcgcgctt gcctccatcg gcgcattttc
      601 cgtcatgcac gtcttcctgc cgccccatcc gggcccgatt gccgcttccg aattttacgg
      661 cgcgaacatc ggccaagttt tgattttggg tctgccgacc gccttcatca catggtattt
      721 cagcggctat atgctcggca aagtgttggg gcgcaccatc catgttcccg ttcccgaact
      781 gctcagcggc ggcacgcaag acaacgacct gccgaaagaa cctgccaaag caggaacggt
      841 cgtcgccatc atgctgattc ccatgctgct gattttcctg aataccggcg tatcggccct
      901 catcagcgaa aaactcgtaa gtgcggacga aacctgggtt cagacggcaa aaataatcgg
      961 ttcgacaccg atcgcccttc tgatttccgt attggtcgca ctgtttgtct tgggacgcaa
     1021 acgcggcgaa agcggcagcg cgttggaaaa aaccgtggac ggcgcactcg cccccgtctg
     1081 ttccgtgatt ctgattaccg gcgcgggcgg tatgttcggc ggcgttttgc gcgcttccgg
     1141 catcggcaag gcactcgccg acagcatggc ggatttgggc attcccgtcc ttttgggctg
     1201 tttccttgtc gccttggcac tgcgtatcgc gcaaggttcg gcaaccgtcg ccctgaccac
     1261 cgctgccgcg ctgatggctc ctgccgttgc cgccgccggc tttaccgact ggcagctcgc
     1321 ctgtatcgta ttggcaacgg cggcaggttc ggtcggttgc agccacttca acgactccgg
     1381 cttctggctg gtcggccgcc tcttggacat ggacgtaccg accacgctga aaacctggac
     1441 ggtcaaccaa accctcatcg cactcatcgg ctttgccttg tccgcactgc tgttcgccat
     1501 cgtctgacag acggaaagga tagtaaatga ctacgcattt tgtcgttatg ggcgtatgcg
     1561 gctgcggcaa gaccaccgcc gcgctgtccc tgcagaaaca cctcggtcaa tgtccctatg
     1621 ccgaaggcga cgagttccac acccaagcca accgcgacaa gatgggcgcg ggtattccgc
     1681 tgaccgatga agaccgctat ccgtggttgg gcaatctgcg cgactggatg acgcaacagg
     1741 cgcaaaacgg tgcgaaccac accatcgtaa cctgttccgc cctcaaacgc ggctaccgcg
     1801 acattctgcg cggagccgaa ggcaaagctg ccttcatcca cctcagtccg ccgcaagaca
     1861 tcaacctcga gcgcatgatg tcgcgcaaag gacattacat gaaagcaggg atgctcgatt
     1921 cgcaactgga aatcctcgag gaactgggcg aaggcgaata cggggtcaaa atcgccaacc
     1981 ccggcacgcc cgaagcggtc gaagccgata ttctgaactg ggttgcctcg gaaaacctgc
     2041 tttgaagcaa tatgccgtct gaagcccgac acaggatggg tttcagacgg cataaacatc
     2101 gggaacagaa tggattacat tgatttatag tggattaaca aaaaccagta cagcgttgcc
     2161 tcgccttgtc ctgatttttg ttaatccact ataaaatgga aaatacccgg ctatcgtctc
     2221 attttcgttt taatcagcca taaaaatgcc gtctgaaacc ctttcagacg gcatttctgt
     2281 caaacgccgg acgcactcaa tccaaactca acagcaggtt gcggaacgcg ttcgggtctt
     2341 tgataaacgt catctcgccc gcctgcggaa aatgaaaatc caacaggcgc gacacccaaa
     2401 aacggatgca gccggcgcgt tgggcggtcg gaaaatacgc cttttcttcg gcactcaagg
     2461 ggcgcacgcc ctcataaccg ccgataaacg cctttttcaa cgcctcatcc aacttattgt
     2521 ccgccgtcct tgcccaatcg ttgaccgcaa tcgccaagtc atacataaaa ttgccccggc
     2581 aggcataata aaaatcgata aagcccgaca cctgaccgcc gtcaagcaac acattgtctt
     2641 taaacaaatc ggcgtggatg atgcccgaag gcagatgatt gccgagattg tccttcagcg
     2701 catcgatttc ggaacacagc agcgcagcat cgtcttgcga caggacgggc agcagccggg
     2761 cgcacgcctc cgtccaccac gcatcgtaac gcgggttttc catttccaaa gggaaatcgg
     2821 cggcgacaag gtgcattttg gccaacatcg caccggtatg gaaacactgc tccgccgtcg
     2881 gcagcgcagt atccgaacct ttcaggcagg caaccaagca ggcgggcttg cccgccaaaa
     2941 cggaatcaag ccggccgtct ttgcgcgcaa ccggcgcggc aaccgccacg cccttcatac
     3001 tcaaatgccg gttaagctcc agaaaaaacg gcagctcttc ctgtttcaac acttcaaaca
     3061 cggtcagcac ataacgtccc gaagtcgtcg tcagaaaata attgctgttg gtaatcccct
     3121 gcgcgatgcc ctgcagggaa acaaattccc ccaaatcgta accgctcagg aagccgcgca
     3181 tttcatcatc ggaaacactg gtatagacag acatatcaac tcacttgctc aaaaacgggc
     3241 aaacccgccg tcagaacgcc ggacggcagg caaacatata attcacatcg gtcgaatcgc
     3301 acagggcata agtttgcgac aacacatggt aagtcatacc cttcgtatcc gccacatcca
     3361 agcctgcctg acggcacatt cgcgccagct cggcaggtgc gatgaatttt ttccagtcgt
     3421 gcgtgccttt ggggacaaac ttcaacagat attccgccgc cacaatcaga tgcaggtacg
     3481 atttcgggtt tttattgatg gtagaaaaaa acaccatgcc gtccggtttg accagattgg
     3541 cacaagcacg cacgatggcg gcgggatcgg ggacgtgttc catcatttcc atgcacgtta
     3601 ccacatcgaa cgagtgcggt tccgcctcgg caaggtcttc cacgcggata cattcgtatt
     3661 cgatatcggc gacattgttc aaagccgcgt gcaggcgggc ggtttccagc gactgctccg
     3721 ccatgtcgat accctttaca aacgccgcgc cgcgccgcgc catgctttcc gccaggatgc
     3781 cgccgccgca gcccacatcc aaaacccgtt tgccgcacaa atccgcgtgt ccgtcgatat
     3841 aatccagccg cagcggattg atgtcgtgca aggttttgaa ctcgcccgac ttgtcccacc
     3901 atttgtcggc aatccggctg aatttggcga tttccccctc atcgacatta tattttttgt
     3961 cggacatttt ccctcccatc tgacgaaccg cccactccaa aacccaagat tatactatgg
     4021 aacgcaatgc cgtctgaaag ccttttcggg cggcgcggcg caaatacctt acaaatcctt
     4081 acactttacg gcataatggc ggctcgcttt ttctggcaga aagacaaaat atgcccacca
     4141 aaaccccttc actgttcggc tgcgcgatga ttatcgccgg cacggtcatc ggcgcaggta
     4201 tgctcgccaa cccgaccgcc acatccggcg tatggtttac cggctcgctg gccgtgttgc
     4261 tgtacacctg gttttccatg ctctccagcg gcctgatgat tttggaagtc aacacccact
     4321 acccccacgg cgcgagcttc gacaccatgg ttaaagacct gctcggacgc ggctggaaca
     4381 tcatcaacgg tatcgccgtc gccttcgttt tatacctgct tacttacgct tatatcttcg
     4441 tcggcggcga cctgaccgcc aaaggcatcg gcaacgcctt gggcggcaat gtttcgctta
     4501 ccgtcggaca actcgtcttc ttcggcatcc tcgccttttg cgtatgggca tccgcacgct
     4561 tggtcgaccg attcaccagc gtcctcatcg gcggcatggt attaaccttt atttgggcaa
     4621 ccggcggcct gattgccgat gccaaaatgc ctgttttgtt tgacacccaa gcccctgccg
     4681 gcaccggcta ctggatttac gccgccaccg ccctgcccgt ctgcctcgct tccttcggct
     4741 tccacggcaa cgtttccagc ctgctcaaat actttaaagg cgacgcgccc aaagtggcta
     4801 aatccatctg gatgggcaca ctgattgcgc tggtaattta cgtcctctgg caaaccgcca
     4861 tccaaggcaa cctgccgcgc aacgagttcg cccccgtcat cgccgccgaa gggcaagtct
     4921 ccgtcctcat cgaaaccctg tccaaattcg cccaaaccgg caatatggac aaaatattgt
     4981 ccctgttttc ctatatggcg atcgccacct cgtttttagg cgtaacgctc ggactcttcg
     5041 actacatcgc agacatcttc aaatggaacg acagcgtgtc cggccgcacc aaaaccgccg
     5101 cgctgacctt cctgccgccc ctgatttcct gcctgctctt ccccaccggc ttcgttaccg
     5161 ccatcggcta cgtcggcctg gcggcaaccg tctggacagg catcatcccc gccatgctgc
     5221 tctaccgttc gcgcaaaaaa ttcggcgcag gcaaaaccta taaagtttac ggcggcttgt
     5281 ggctgatggt ttgggtcttc cttttcggca tcgtcaacat cgccgcacag gtattgagcc
     5341 aaatggaact cgtccccgta tttaaaggat aaaggcaaaa tgccgtctga agccctgttc
     5401 agacagcctt acgacattcg gaaaatcata tggaactcaa aatagacatt gcaaccaaca
     5461 acttcaaaca cggcggcggc acggaacgct acacattgga tttggtaaag ggtctgaaca
     5521 gacaaaacat cacaccggcc gtttatgcga cgaaatttga tcacggcatt cctgaatacg
     5581 ccatgatcga accccatctt gtcgatcaac accggacgct gaaaaaacta cgctcattcc
     5641 tcttttcaag tcggctcgct caaaccagaa aaaacagtgc cgccaaactg attgcctgcc
     5701 accacgccga ttacgccgac ctcctcatct gcggcggcac acacttgggc tacctgcacc
     5761 atatggcgca aaaaccgaac ctgctcgacc gtctcgccat acgccgcaac cgcagcaact
     5821 acgccaccgc caaactgatt atggcgcatt cccatatgat gcggcgcgaa ctggtcggac
     5881 tgtacggcgt tccccctgaa agaatccaag tcgccccccc ccccgcagat acggaacgct
     5941 tctttccaca acccggagaa actgccgacc tgcgcgccaa atacggcttt gccgaccatg
     6001 aaaccgtttt cctgttccca tcgaccggcc acacgcgcaa aggtctggaa ctgcttgccg
     6061 actttttcga acataccggc ctgcccgtca agcttgccgt tgtcggctcc ccgctccccc
     6121 gccctatgaa aaacgtcgtc ggactgggct tctgcaccga tatgcccgaa ctctaccgcg
     6181 ccgccgactt taccattatg gcctccctgt atgaaccctt cgggctggtc ggtgtcgaat
     6241 ccgtcctatg cggcacacgc gtcgtcctct ccgaaaacat ggcatgtaca gaggtcatga
     6301 acgaagaagc cggattcttt ttctcacgcc aaaacccgga aaccctggcg caagccgttg
     6361 cccaagccgt cagccttaaa aaacagggcg gacaccgcct gtccgacccg atgcgtgcac
     6421 tgaactacaa cccgtccctg tcgcaccaca tcgaccgact gaccgacata ctggcatccg
     6481 tataacaaaa tgccgtctga acgagttttc agacggcatt tttgcaaccg ttgcagccgt
     6541 gcggcaaaaa gctaactggc aattttcaaa acgtcgtaca gatagttccg atagtctccg
     6601 accagtttcc ggttcgggca gtcttccaac cctccgccgc acaaaccgcg catcgccata
     6661 ttcgcacgca tgaagccgtc tttggcttcc agaccagccg cctccatcag cacgccgcct
     6721 gcaaaggcaa ggtcgaggaa atcctgccgc tgtacgaatc cgccggcaat attgctcctg
     6781 acggcaaact gcgttacata atccggctgc gcgtaatccc atttcttcct gacggacacg
     6841 ccctcaaacg gtacctgatg atcgccgaaa taaccgaaaa caaagggttt gccgcgttcg
     6901 tgcagataac ggtcgaaact ttccaccgct ttgtccaaat cggcaatgcg cccgatgtag
     6961 tcgttaagcg cggatacggt tttcgcattc aaatcaggta catccaaatc aaacacattg
     7021 tcggtatccg tccgatacgg cccgtgctcc ttcatggtca gcacatatac gaacatcggc
     7081 tgccgcacgt tttccaaatc gggatggcgt ttttccaaaa tcatccgcgc atactgcatc
     7141 atttcctcac tggaaatatg ccacaggttt ttgcccatcg gcgcgggata gcccaaatct
     7201 tgcggctgga acatcagatt aaagccgaaa tggtcatatg ctgccttggc attgtagttg
     7261 cccttggtaa acggcgagag cgccacgcaa aaataaccgt gttcgcgcag gttgcggaca
     7321 aaaccggtct gcaaatgcgg cacgaccgag taaaacacgc cgcttgccaa cgcgccgaaa
     7381 tccgtggacg gaacacccgc caaaaacgca aattctgact tccacgttgc gccgccgaaa
     7441 gtatgcacgc gcaaaggtga ggaaaatacg gtatcttcct gccgtccgaa cattttcaaa
     7501 tcgggaatct tggcggcggc aaagtcgaaa cagtgcggat cgagcgtcga ttccatcagg
     7561 gtaacgacaa tatcgggttt ctcatccgac atgccgtacg gctgggtttc agacggcatc
     7621 tgtttggcaa acgcttcccc gtcgccctcg aacacgggta cttggaaaaa caccgcccga
     7681 caggacatcg gcaggttcaa aaatacgtcg cgcccgtcgt ccggcagcga gtccagccac
     7741 gtctttaccg cgcccggatg tttggaaaaa tgccgcatcg acacgaacgc cgccgcaaac
     7801 aaaaccgtgc ctgcccaacg ccatggcaaa cccaaagcat ccgcaccgct ccagccgaaa
     7861 accgcatatg ccgccaaagc cagcagcccc gccataccga taaccgcttc cttataatgg
     7921 aacagcgttt cccaattccg ccagtcggca atcagcaaaa agtcggaaat caacaacggc
     7981 tgtttgtaat aatggatttt cagcctgtgg aacagtatca gcaccacaaa ccagaccgaa
     8041 gcgaaattca aggcgcgctg ccactgagcc gtcaacatca gcataccgcc cgccaaaaag
     8101 acaaacagcg cggatgcgaa aaaatacgtc caacggtagt gcgacctgat aatcagcacc
     8161 aacgccgccg ttacaaacaa aaataggaaa acataggcaa ccatcccgtc ccactcctca
     8221 aaacggcata cctgagccgt tgcgaattat tatcgaaagt gtgcattata atgcagcaca
     8281 ggcgcatcac tgccgatatt tcagtataat tattcgagat ggaatcactg aaaatggtga
     8341 agttacaatg agccctttta gaggaactaa aaagtgaatt ataaaatata cgatggtgca
     8401 aagattatta aaaaagaaaa tttatcaatt ggggattatt ctcaaattga tgattttgta
     8461 ttttttaatt gtggagagaa aagtatttta ggaagttttg ttcatatatc atcatttacc
     8521 agtattattg gtggtggaga attttatatg gatcattttt caggattaag cgcagggtgt
     8581 agaattatta ccggtagcga tgattttatg gggggggggg ttaaccaatc caacagtccc
     8641 atctaaatat actaatgtta aaaaatctag tgttagaatt ggaaaacatg caattttagg
     8701 aacaaatgta acagtattac caggcgttac tattggtgat ggggttgctg ttggagcagg
     8761 ggctatagtg agaaaaaatc ttgagccgtg gactatttat gtcggggtag attgtaaacc
     8821 actgaagcgc agatcacaag ataaaatatt ggagttagag aaacatcttg tagcagaatt
     8881 taatctagat ttatgtccta taatcccatc cccgaacctg cccaaaccaa aggaaacgcg
     8941 atgaaactca tcattctcga ccgcgacggc gtcatcaatc aggaccgcga cgacttcgtc
     9001 aaatccgttg acgagtggat acctgtcgaa ggcagcatgg atgcggtggc atttctgacg
     9061 caggcaggct acaccgtcgc cgttgccacc aaccaatccg gcatcgggcg caaatatttt
     9121 accgttcaaa accttaccga aatgcacgcc aaaatgcacc gcctcgtccg tcaggcaggc
     9181 ggcgaaatca acggcatctg gttctgcccg cacaccgatg ccgacaactg caactgccgc
     9241 aagcccaaac cgggtatgat tgaagacatc atcggacgct tcaacgccca agcctcggaa
     9301 acctggctgg tcggcgacag cctgcgcgat ttgcaggcaa tcgatgccgt cggcggaaaa
     9361 cccgcgctgg ttctgaccgg aaaaggcaaa aaaacgctct cccaacacgg acacgaatta
     9421 cccgaacaca cacaggtttt cgataccttg ctcgatttct cacaatacat catgcaggaa
     9481 aacaccgcac cgcaagccga ctgaacatac cgcattccga caaggcaaaa ccatgctcat
     9541 catccgcaac ctgatttact ggctgatact ctgttccacc ctgattttcc tctttccctt
     9601 tatgctgctc gcctcgcctt tccgagacgg ggcgcacaag atggcgcggg tctgggtcaa
     9661 aatcctcaac ctctcgctca aacacatcgt cgggctcaaa taccgcatca tcggcgcgga
     9721 aaacatcccc gaccgccccg ccgtcatctg cgccaaacac caaagcggct gggaaacgct
     9781 cgcccttcag gacatttttc cgccgcaggt ttacgttgcc aaacgcgagt tgttcaaaat
     9841 cccctttttc ggctggggct tgaaactggt caaaaccata ggcatagacc gcaacaaccg
     9901 ccgcgaagcc aacgagcagc tcataaaaca ggggttggcg cgcaaaaacg aaggctattg
     9961 gattaccatt ttccccgaag gcacgcgcct tgcgcctgga aaacgcggca aatacaaact
    10021 cggcggcgcg cgcatggcga aaatgtttga gatggacatc gtccccgtcg ccctcaacag
    10081 cggcgaattt tggccgaaaa actcctttct gaaatatccg ggggaaatca ccgtcgtcat
    10141 ctgtccgacc atcccgcacg caagcggcag cgaagccgaa ttgatgggaa aatgcgaaca
    10201 cctcatcgaa acgcagcagc cgctcatttc cggcgcaggc ccgtttgccg ccaaaatgcc
    10261 gtctgaaacc gcatgaccgc ctttgtccac accctttcag acggcatgga actgaccgtc
    10321 gaaatcaagc gccgtgccaa gaaaaacctg attatccgcc ccgccggcac acataccgtc
    10381 cgcatcagcg tcccaccctg cttctccgtc tccgctctaa accgctggct gtatgaaaac
    10441 gaagccgtcc tgcggcaaac actggcgaaa acaccgccgc cgcaaactgc cgaaaaccgg
    10501 ctgcccgaat ccatcctctt ccacggcaga cagcttgccc tcaccgccca tcaagacacg
    10561 caaatcctgc tgatgccgtc tgaaatccgt gttcccgaag gcgcacccga aaaacagctt
    10621 gcgctgctgc gggacttttt ggaacggcag gcgcacagtt acctgattcc ccgcctcgaa
    10681 cgccacgccc gcaccacaca actgttcccc gcctcctcct cgctgacctc tgccaaaacc
    10741 ttctggggcg tgtgccgcaa aaccacaggc atacgcttca actggcggct ggtcggcgca
    10801 ccggaatacg ttgccgatta tgtctgcata cacgaactct gccacctcgc ccacgccgac
    10861 cacagccgcg cgttctgggc actgacccgc cgcttcgcac cctacacgcc cgaagcgaaa
    10921 cagtggctca aaatccacgg cagggaactt ttcgccttag gctgacgcgg cccgggcagg
    10981 catccgccaa ttcagacctc ctcccaaacg gacatccgga aagcagcatc acagccggcg
    11041 acacataccg ctgccgccgc tttcagacgg catccgtgcc ggaacaggca cgcgcccgcc
    11101 cgattcaaac cgcgatgacg ctttgccgcc ggttcggggc aggatggcgg cacacacgcc
    11161 gtctgccgcg tttcatttca caccgccctt ccgaaacccg aaacccgccc ggtccgacgt
    11221 gcggtatgaa acgcttaagc tggcgcgaag tcttttactg atttgcccgc gaaaatgccg
    11281 tctgaaaggt tttcggacgg catttttttg cgtttcccag gatggcggcg gattcgtaaa
    11341 aggcggtcag ggtggattgt aggatgggtt gagacctgcc gaatccgccg catctgccaa
    11401 atctaccgcc gtcattccta cgaaagtggg aatctagaac gcgaggttaa gaaaacctgc
    11461 at
//
LOCUS       DAWGKF010000057        11437 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.057, whole genome shotgun sequence.
ACCESSION   DAWGKF010000057 DAWGKF010000000
VERSION     DAWGKF010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11437)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11437)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11437
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.057"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..2628)
                     /locus_tag="WHR07_001047"
     CDS             complement(<1..2628)
                     /locus_tag="WHR07_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly/adherence protein PilC"
                     /protein_id="HEZ2130268.1"
                     /translation="MNEQNQLKVKQKGSYSTLREKDRERKFIYNKSWQGGGSVFFDNT
                     DTLVSRQSGTAVFGTATYLPPYGKVSGFDANALKERNNAVDWIHTTRAGLAGYAYTNV
                     VCRSHQCPQLVYKTRFSFDNPDLAKRGGGLDRHTEPSRDNSLIYKLKDHPWLGVSFNL
                     GSENTVKNSQSSSRLISSFSEDNNNQTIVSTTENHPISLGDRQREHTAVAYYLNAKLH
                     LLDKKGIKDITGKTVRLGVLKPSIDVKTQRTGLGGLLGFHAKWDIKDTGQIPVELGLP
                     QIKAGRCINKPNPNPKAQALSPALTAPALWFGPVQNGKVQMYSASVSTYPDSSSSQIF
                     LQNLSRKDDTSKPGRYSLKPLSTSEIKSKEPTFTGRQTVIRLDGGVQQIKLQGNEVTS
                     FNVNNGNNTFGIVKDLGVDPDASEWKKVLLPWTVRASNDDNQFKTINQQLNQQKIQYS
                     QRYRIRDNGNRDLGDIVNSPIVAVGEYLATSANDGMVHIFKQSGGDKRSYNLKLSYIP
                     GTMPRQYFDNDTSALKDSTLAKELRTFAEKGYVGDRYGVDGGFVLRRITDDQDKQKHF
                     FMFGAMGLGGRGAYALDLTKADSNNPTAVSLFDVKNGNNGNNSNNSNNSVQLGYTVGT
                     PQIGKTHNGKYAAFLASGYATKTIDDQQNKTALYVYDLESSGTLIKKIDVPGGKGGLS
                     SPTLVDKDLDGIVDIAYAGDRGGNMYRFDLSSDNPSSWTVRTIFSGNKPITSAPAISQ
                     LKDKRVVIFGTGSDLSEDDVDKTDEQYIYGIFDDNTATTGPVNFSGTGGGLLEQVLTE
                     ENKTLFLTDYKRSDGSGSKGWVVKLKDGQRVTVKPTVVLRTAFVTIRKYKDNGCGAET
                     AILGINTADGGKLTKKSARP"
     gene            complement(3382..4461)
                     /gene="apbC"
                     /locus_tag="WHR07_001048"
     CDS             complement(3382..4461)
                     /gene="apbC"
                     /locus_tag="WHR07_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HEZ2130269.1"
                     /translation="MNIQNIRTLLDTVAVPNTARTLGGEKAVRSVEQRSDGIHIALHF
                     GFPVAHIAAAVADSVQEILMPETGGAHIHLSIDTEIGTHKVQPGVTTIKGVKNIIAVA
                     SGKGGVGKSTTTANLAAAMARMGARVGVLDADLYGPSQPTMLGVDDRKPDQKNQKLIP
                     VESSDGIQVMSIGFLVDTDQAVVWRGPMVSQALQQLMFQSEWDEVDYLFIDLPPGTGD
                     IQLTLSQRIPVTGSVIVTTPQDIALIDARKAVDMFRKVNIPILGVLENMSVHICSNCG
                     HSEALFGTDGGKDLAARLNVPLLGQLPLSLPVREAMDGGATAQLFDEHPAIARIYTDA
                     AFQIALGIADKGKDFSSRFPKIVVE"
     gene            4672..4747
                     /locus_tag="WHR07_001049"
     tRNA            4672..4747
                     /locus_tag="WHR07_001049"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4705..4707,aa:Lys,seq:ttt)
     gene            4826..5335
                     /locus_tag="WHR07_001050"
     CDS             4826..5335
                     /locus_tag="WHR07_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein disulfide oxidoreductase"
                     /protein_id="HEZ2130270.1"
                     /translation="MKKKLLSGIKFAVQTALVFLLVSLFLDWIRKPDEPAGAAGRPLT
                     LLSGQRLTLGQFSRDKAVLVYFWGSWCGVCRYQSPIIDDLAADGVPVVGVAVRSGSSA
                     EVAAYMAKRGLGFPTANDEDGGLARSWRIVATPAVVLVKNGKMVHYTTGISSYWGLRA
                     RIFQADVFG"
     gene            5678..6118
                     /gene="nadR"
                     /locus_tag="WHR07_001051"
     CDS             5678..6118
                     /gene="nadR"
                     /locus_tag="WHR07_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family adhesin repressor NadR"
                     /protein_id="HEZ2130271.1"
                     /translation="MPTQSKHASINISLIQAREALMTQFRPILNQANITDQQWRIIRL
                     LAENGTLDFQDLANQACILRPSLTDILTRLEKAGLVVRLKPSNDQRRVFLKLTAEGEK
                     LYEEIGEEVDERYDAIEEVLGREKMLLLKDLLAELAKIEDALNS"
     gene            6233..6733
                     /gene="hpaC"
                     /locus_tag="WHR07_001052"
     CDS             6233..6733
                     /gene="hpaC"
                     /locus_tag="WHR07_001052"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     reductase component"
                     /protein_id="HEZ2130272.1"
                     /translation="MADLQKTFQTSFRDAMASCAAGVHVITTDGAAGRYGITMTAVTP
                     VTDEPPTVMLCINRKARIIPILSENGSLCINTLADEHQDVAEHFAGLTGLSPEERFAY
                     HIWHRGKTGQLEIEGALAHLHGHIVGKHEIGTHFVFYVRLDEIKNCGCKRPALLYFRR
                     QFRFLD"
     gene            6749..7444
                     /locus_tag="WHR07_001053"
     CDS             6749..7444
                     /locus_tag="WHR07_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEZ2130273.1"
                     /translation="MKAMILAAGRGERMRPLTDTTPKPLLDVAGKPLIGWHLCRLKQA
                     GFTEIVINHAWLGRQIEDALGDGSAYGVNIAYSPEPAGGLETAGGIAQALPLLGGQPF
                     LVVNGDVLTDIDFTAAFQAASSLPEHISAHLWLVENPPHNPDGDFSLLPDGSVRPEVN
                     GGNGLTFSGVGIYRPEMFDGIEAGSVAKLAPVLRGEMRQNRVSGQKHTGLWLDVGTVC
                     RLKEAQALAGAWK"
     gene            complement(7675..8106)
                     /locus_tag="WHR07_001054"
     CDS             complement(7675..8106)
                     /locus_tag="WHR07_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEZ2130274.1"
                     /translation="MSSNAWLFWALASAGFASLTAVFAKMGLQGIDSDFATFIRTLVI
                     LAALVLFLTYTGKWQGVNGFTGRNWTFLILSGLATGASWLAYFKALQLGNASQVAPID
                     KFSLVLVALMAVVFLDERPNTQEWIGLGLVTAGVLVLALKR"
     gene            8281..9957
                     /locus_tag="WHR07_001055"
     CDS             8281..9957
                     /locus_tag="WHR07_001055"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HEZ2130275.1"
                     /translation="MSFKTDAEIAQSSTMRPIGEIAAKLGLNADNIEPYGHYKAKINP
                     AEAFKLPQKQGRLILVTAINPTPAGEGKTTVTIGLADALRHIGKDAVIALREPSLGPV
                     FGVKGGAAGGGYAQVLPMEDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELDIDPK
                     RVLWRRVVDMNDRQLRNIIDGMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKE
                     RLGNILVAYAKDGSPVYAKDLKAHGAMAVLLKDAIKPNLVQTIEGTPAFVHGGPFANI
                     AHGCNSVTATRLAKHLADYAVTEAGFGADLGAEKFCDIKCRLADLKPDAAVVVATVRA
                     LKYNGGVERANLGEENLEALAKGLPNLLKHISNLKNVFGLPVVVALNRFVSDSDAELA
                     MIEKACAEHGVEVSLTEVWGKGGVGGADLARKVVNAIENQPNNFNFSYDVELSIKDKI
                     RAIAQKVYGAEDVDFSAEASAEIASLEKLGLDKMPICMAKTQYSLSDNAKLLGCPEGF
                     RITVRGITVSSGAGFIVALCGNMMKMPGLPKVPAAEKIDVDAEGVIHGLF"
     gene            10071..11162
                     /gene="ychF"
                     /locus_tag="WHR07_001056"
     CDS             10071..11162
                     /gene="ychF"
                     /locus_tag="WHR07_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002642527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HEZ2130276.1"
                     /translation="MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIV
                     EVPDPRMAELAKIVNPQKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVN
                     VVRCFDDDNIVHVAGRVDPIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQK
                     LVDLCKKLLPHLDEGKPVRSFGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPH
                     LERLKELAAKENAPVVAVCAAMESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDL
                     LGLQTYFTAGVKEVRAWTIHKGDTAPQAAGVIHTDFERGFIRAQVISYDDFVSLGGEA
                     KAKEAGKMRVEGKEYVVQDGDVMHFLFNV"
BASE COUNT         2506 a         2916 c         3232 g         2783 t
ORIGIN      
        1 cgggcgcgcg cttttcttgg tcagcttgcc gccgtcggcg gtattgatgc ccaaaatggc
       61 ggtttccgcg ccgcagccgt tgtctttata tttgcggatg gttacaaagg cggtacgcaa
      121 taccacggtc ggtttgacgg taacgcgctg tccgtccttc aatttcacta cccacccttt
      181 gctgcccgag ccgtcggatc gcttgtaatc ggtcaggaat aaggttttat tttcctcagt
      241 aagcacttgc tcgagcagcc cgcctcccgt accgctgaag tttacaggac ccgtcgtcgc
      301 cgtattgtcg tcaaagatac cgtaaatata ttgttcgtcc gttttatcaa catcatcctc
      361 actcaaatcg ctgcccgtgc cgaagataac cacgcgtttg tctttcagtt gggaaatggc
      421 gggcgcggaa gtaatcggtt tgttgccgct gaaaatagtg cgtacagtcc agctggacgg
      481 attgtcgctg ctcaaatcaa agcggtacat attcccgccg cgatcgccgg cataggcgat
      541 atcgacaatg ccgtccaaat ctttatccac cagcgtgggg gacgaaagcc cgcccttgcc
      601 gccgggtaca tcgatttttt taatcagcgt accgctgctt tccaaatcat acacatacag
      661 cgcggtttta ttttgttggt cgtcaatggt tttagtcgca taaccggagg cgaggaaggc
      721 ggcgtatttg ccgttgtggg ttttgccgat ttgcggcgtg ccgacggtgt agcctaattg
      781 cacgctatta ttgctattat tgctattatt gccattattg ccatttttga catcaaacag
      841 ggaaacggcg gtcgggttat tgctgtcggc tttggtcaaa tccaaggcat acgcgcctct
      901 gccgcccagg cccatcgcac caaacataaa gaaatgtttt tgcttgtctt ggtcatctgt
      961 aatgcggcgc aagacaaagc cgccgtccac gccgtagcgg tcgcccacat agcctttttc
     1021 ggcaaaggtg cgcagctctt tggcgagggt ggagtctttg agagcggaag tgtcgttatc
     1081 aaaatattgg cgcggcatcg tgccggggat gtagctgagc ttcagattgt agctgcgctt
     1141 gtccccgccg ctttgtttga agatatgcac catcccgtcg ttggcggaag tagccaaata
     1201 ctcgccgacc gccacgatgg ggctgttgac gatgtcgccc aaatcgcgat tgccgttgtc
     1261 gcggatgcgg tatctttggc tgtattggat tttttgttgg ttaagttgtt ggttaattgt
     1321 tttaaattga ttgtcatcat tggaagcacg aaccgtccaa ggcagcagca cttttttcca
     1381 ctcgctggca tcaggatcga cgcccaagtc cttaacaatg ccgaaagtgt tgttgccgtt
     1441 gtttacatta aaactagtga cctcattgcc ttgaagttta atctgctgta cgccgccatc
     1501 caatcggatg acggtttgcc gccctgtgaa agtcggctct ttacttttaa tctccgacgt
     1561 actcaagggt ttgagggaat agcggcccgg tttgcttgtg tcatccttgc gggaaaggtt
     1621 ttgcaggaaa atttggctgc tcgaactgtc ggggtaggtg gaaaccgaag cggaatacat
     1681 ctgcaccttg ccattttgca caggtccgaa ccacagcgcg ggggcagtca gtgccggcga
     1741 aagggcttgg gctttgggat tggggttcgg tttgttgatg cagcggcctg ctttgatttg
     1801 cggcaggccg agctcgaccg gaatctgccc ggtatcttta atgtcccact tagcatgaaa
     1861 acctagcaag ccgccaagcc ccgtcctttg tgtcttcaca tcgatgctcg gcttcaagac
     1921 acccaaccgc actgttttgc cggtgatatc tttaatccct tttttatcca gcaggtgcag
     1981 tttggcgttc agataatagg ccacggcggt atgttcgcgc tgcctgtcgc caagggaaat
     2041 agggtggttt tctgtcgtag agacgatggt ttgattatta ttgtcttcac taaaagaaga
     2101 tatcaatctg ctggatgatt ggctattttt gacggtattc tcgctgccca aattgaaaga
     2161 tacgcccaac catggatgat ccttcaattt gtaaatgagc gaattgtcgc ggcttggctc
     2221 tgtgtgccta tccagcccgc ctcctctttt tgccaagtcg ggattatcga aggaaaatcg
     2281 ggttttatag acaagttggg ggcattggtg gcttctgcat acgacgttgg tgtaggcgta
     2341 gcctgccagc ccggcccggg tggtatgaat ccaatcgacg gcattgttgc gctctttcag
     2401 agcgttggca tcaaaaccgg aaaccttgcc gtagggcggc aggtaggtgg ctgtgccaaa
     2461 aacggcagta ccgctttgtc gggaaacaag ggtatcggta ttgtcgaaaa agacagagcc
     2521 tccaccctgc cagcttttat tatagataaa tttgcgttcc ctgtcttttt cccttaaggt
     2581 tgaatatgaa cccttctgct ttaccttcag ctgattttgt tcgttcatga caatagcgta
     2641 gttatgggtt tccgcctgcg cccccccccg gtatgggaaa acatcaagat ggcggcataa
     2701 agcgcggtat ggcggaaaac ctgccttttt aaagttttat tcatcgtatt tccttttcgg
     2761 tcaaaccccc ccgcccttcg ggcatccgtc cttcggggcg gcaggatcag gctttgtccg
     2821 ggaggggtgc aagcccttcc gaatcagggc ggcgccttat gtgccgccct gcgtgttgga
     2881 acatatgttt cgcagggtgt ttcgtgggtt tcgcagggcg ggctgtaggg cgggctttag
     2941 cccactctat ggcgcacctt gcgaatctgc cttataaaaa tacccgaacc gtcattcccg
     3001 cgcaggcggg aatctaggat gcggaatcta gagaaaccgt ttatccgata agtttccgtt
     3061 ccgacaggtc tggattcccg cctgcgcggg aatgacggac gggaacggcg cacgggcatt
     3121 gccggaatct tttgtgtttc cattatcata ctctttttaa tgcgctattc caagaatatg
     3181 atgccctccg gcggcatccc accctacggc ttgctataaa aatacctaaa ccgtcattcc
     3241 cgcaaaccta cattccgtca ttcccacgaa agtgggaatc cggaacgtaa aatctcaaaa
     3301 aaaccgtttt atccggcaag tttgcccgcc ggcaggcgcg gggcttggga cggcattgct
     3361 gttgcggttt cggacgcggc tttattcgac gacaattttg gggaagcggc tgctgaagtc
     3421 tttgcctttg tcggcaatgc ccagggcgat ttggaatgcg gcatcggtgt agattcgggc
     3481 gatggcgggg tgttcgtcga acagttgcgc cgtcgcccct ccgtccatgg cttcgcgcac
     3541 gggcaggctt aatggaagct gtcccagcag ggggacgttg aggcgtgccg ccaagtcttt
     3601 gccgccgtct gtgccgaaca gtgcttcgct gtgtccgcag ttggagcaga tgtggacgga
     3661 catattttcc aatacaccta aaatgggaat gttgactttt cggaacatat ccacggcttt
     3721 gcgcgcgtct atcagggcga tgtcctgcgg cgtggttacg atgaccgatc cggttacggg
     3781 gatgcgttgg gacagcgtga gttggatgtc gcccgtgccg gggggcaggt cgataaacag
     3841 gtagtccact tcgtcccact cgctttgaaa catcagttgc tgcaaggctt ggctgaccat
     3901 cggcccgcgc cagacgacgg cttggtcggt atcgacgaga aagccgatag acatgacctg
     3961 tatgccgtct gaagattcga cgggaatgag tttttggttt ttctgatcgg gtttgcggtc
     4021 gtccacaccc aacatggtcg gttggctcgg gccgtaaagg tcggcatcga gcacgccgac
     4081 gcgcgcgccc atccgcgcca ttgcggcggc aaggttggcg gtggttgttg atttgcccac
     4141 gccgcctttg ccggaggcga cggcaatgat gtttttcaca cctttgatgg tggtaacgcc
     4201 aggttggact ttatgtgtgc cgatttcggt gtctatggac agatggatgt gcgcgccgcc
     4261 tgtttcgggc atcaggattt cttgtacgga atcggcgacg gcggcggcga tgtgcgcgac
     4321 agggaagccg aaatgcaggg cgatatggat gccgtctgaa cgctgttcga ccgaacggac
     4381 ggccttttcg ccgccgagcg tgcgtgccgt attcggaacg gcgacggtgt cgaggagggt
     4441 gcggatgttt tgtatgttca taatgtgtgt ttctgtgtgc agtttgggaa acgggcggaa
     4501 agtgtacatt gatttcgggc ggtttgcttt tccttgtgcg aacttttaca cggtatgcgg
     4561 cggattgtga aaatccgttg tcaaaatatc ccgtgcaaac agtggtctgc aattaagcct
     4621 gtaaaatttg cttgacgagg taggatggtg ctgtataatg cacggcttat cgggtcgtta
     4681 gctcagccgg tagagcagcg gacttttaat ccgttggtcg agcgttcgaa tcgctcacga
     4741 cccaccagat aaccggaagc caagttttga gacttggctt tttgtttgcc tgccggttgc
     4801 gtgggcgtac cgtttgagag agcgtatgaa aaagaaactg ctttcgggca tcaaatttgc
     4861 cgttcagacg gcattggtgt ttttattggt gtcgctgttt ttggattgga tacgcaagcc
     4921 cgacgaacct gccggtgcgg cagggcggcc tttgaccctg ctgtcggggc agcggctgac
     4981 tttgggacag tttagccgag ataaggcggt tttggtgtat ttttggggga gctggtgcgg
     5041 cgtgtgccgt tatcagtcgc cgataatcga tgatttggcg gcggacggcg tgccggtcgt
     5101 cggcgtggcg gtacgttccg gcagttcggc ggaagtggcg gcgtatatgg caaaacgcgg
     5161 cttgggcttt ccgactgcca acgatgagga cgggggtttg gcaaggtctt ggcggattgt
     5221 cgcaacgcct gccgtcgttt tggtcaaaaa tgggaaaatg gtccattata cgacgggaat
     5281 cagcagttat tggggcttgc gcgcacgaat ttttcaggcg gatgttttcg gttaactttt
     5341 gtttttgtta aactttacgc tatgtagaga atcaaacggc atataccttg ctcgtctgat
     5401 gcggcggctt ttgttttttc tggaagaaag ttctttcgac agtaaatgta atactttgtt
     5461 gagattgtag ggaaaataga ctaagatata actattaaaa tatttttaga taggattatc
     5521 ggaattaaag tcttttatac ccagtcgtcc gatgcggttt atagcgtatt gttgctatat
     5581 gttcgttttg ttatataacg gttgcatcaa aatttacgcc cacaggcttt cccgacggtt
     5641 tgaaagtttg attttcgata acttggagac ttgaacaatg cctacccaat caaaacatgc
     5701 gtctatcaat atcagtctga tacaggcaag ggaagccctg atgacccaat tcaggcctat
     5761 tctgaatcag gcgaatatta ccgatcagca atggcggatt atccgtcttt tggcggaaaa
     5821 cggcacgctg gactttcaag atttggcgaa tcaggcgtgt attctgcgcc ccagcctgac
     5881 cgatatcctg acccgccttg aaaaagcggg tttggttgtc cgcctgaaac cttccaacga
     5941 ccaacgacgt gtttttctga agctgactgc cgagggcgag aagctgtatg aggaaatcgg
     6001 cgaagaagtg gacgagcgtt acgacgctat cgaggaagtg ctgggccgcg agaaaatgct
     6061 gctgcttaaa gacctgttgg cagaacttgc caaaatcgag gatgcgttga actcgtaata
     6121 cgccgtaacg cgcggaaacg tccgaccgac ggctttttga atcagaactg ctgcacatgg
     6181 ggggtgcctt gtgtgcagca ttcttatata ggggacagtt taaaggggaa aaatggcgga
     6241 tttgcagaaa acttttcaaa cttcgttccg tgatgcgatg gcatcctgtg cggcaggcgt
     6301 tcatgtcatc acgacagacg gtgcggcagg gcgttacggc attacaatga cggcggttac
     6361 accggttacg gacgagccgc cgaccgtgat gctgtgcatc aaccgtaaag cccgtatcat
     6421 cccgatactg tcggaaaacg gcagcctgtg catcaatacg ttggcagacg aacatcagga
     6481 tgttgccgaa cattttgccg ggctgaccgg gctgtcgccc gaagagcggt ttgcctacca
     6541 catctggcat cgcggcaaaa cgggacaact tgaaatagag ggcgcgttgg cgcacctgca
     6601 cgggcatatt gtcggcaaac atgaaatcgg cacgcatttt gtgttttacg tcaggctcga
     6661 cgaaatcaaa aactgcgggt gcaaacgccc cgcgctgctg tatttcagac ggcagtttag
     6721 atttttagac tgatattcgg acagatatat gaaagcgatg atactggcgg caggacgcgg
     6781 cgagcgtatg cgccctttga ccgataccac tccgaagccg ctgctcgatg tggcgggtaa
     6841 gcctctaatc ggttggcacc tatgccgtct gaagcaggcg gggtttaccg aaatcgtcat
     6901 caaccacgct tggctgggcc ggcagataga agatgctttg ggcgacggct cggcttatgg
     6961 cgtgaacatc gcctattcgc ccgaacccgc aggcggtttg gaaacggcag gcggcatcgc
     7021 gcaggcattg ccgctgttgg gtgggcagcc gtttttggtg gtcaacggcg acgtgctgac
     7081 cgacatcgat tttaccgccg cgtttcaggc ggcatcgtcc ctgccggaac atatttccgc
     7141 ccatctgtgg ctggtggaaa atccgccgca caaccccgac ggcgattttt ccctgctgcc
     7201 cgacggcagc gtgcggccgg aagtaaatgg cggcaacgga ttgacattca gcggcgtggg
     7261 tatttaccgt cctgaaatgt ttgacggaat cgaagcgggc agtgtggcga aactcgcgcc
     7321 cgtattgcgt ggcgaaatgc ggcaaaaccg cgtgagcggt cagaagcata cgggcttgtg
     7381 gctggatgtc ggcacggtat gccgtctgaa agaggctcaa gcccttgcag gggcttggaa
     7441 gtgaaataaa acggtggctt gccgagccgg ctgccgaacg gttccgaccg gatgtccagc
     7501 atattttcgt ggaggcgtga aaatagggcg ttcggggctt tccgtccaac aaatgccatc
     7561 tgaagcgcgg cggtttgccg tcggcgcggt gtcggatttt attgggtaac tttgttcaga
     7621 ccgccgcccg tcagattgtc aaaacccggt ttcaggcggt atggcggatt cggtttaacg
     7681 tttcaacgcc agcaccaaca cgcccgccgt taccagcccc aagcctatcc attcctgcgt
     7741 gttcgggcgt tcgtccaaga aaaccaccgc catcagcgcg accaagacca ggctgaattt
     7801 gtcgatgggg gcgacttgcg aggcgttgcc cagttgcagg gctttgaagt aggcgagcca
     7861 ggatgcgccg gtagcaaggc cggataggat aaggaatgtc cagttgcgcc ccgtaaagcc
     7921 gttcacaccc tgccatttgc cggtgtaggt caaaaacaat accaaagcgg cgaggatcac
     7981 caaggtgcgg ataaaggtgg cgaaatcgga atcgatgccc tgtaaaccca ttttggcgaa
     8041 aacggcggtc aatgaggcga agcctgccga tgccaatgcc caaaacagcc atgcgttgct
     8101 gctcatgttt tctccttgga ttgtgaacaa tatgaacggt atttttgttg cagcgtcaaa
     8161 aatttcactg cgggtttggt gcggataacg ttataatatg cctgatatta ttttcaatcc
     8221 acctgtttgt cgcctgatgc tttcagacgg catgtccctc ctcatttcta aaggaaaatc
     8281 atgagcttca aaaccgatgc cgaaatcgcc caatcctcca ccatgcgccc gattggcgaa
     8341 attgccgcca agctgggtct gaatgccgac aacattgagc cttacggtca ttacaaggcg
     8401 aaaatcaatc ctgccgaagc gttcaaactg ccgcaaaaac agggcaggct gattttggtt
     8461 accgccatta atccgactcc ggcgggcgaa ggcaaaacca ccgtaaccat cggtttggcg
     8521 gacgcgttgc gccacatcgg caaagatgcc gtgattgccc tgcgcgaacc ttctctgggg
     8581 ccggtgttcg gcgtgaaagg cggcgcggca ggcggcggct atgcccaagt tttgccgatg
     8641 gaagacatca acctgcactt caccggagat tttcacgcca tcggtgcggc aaataatctg
     8701 cttgccgcga tgctcgacaa ccatatctat cagggcaacg agttggacat cgaccccaaa
     8761 cgcgtgctgt ggcggcgcgt ggtcgatatg aacgaccgcc agttgcgcaa catcatcgat
     8821 ggcatgggta aacccgttga cggtgtgatg cgccccgacg gttttgatat caccgttgcc
     8881 tccgaagtga tggcggtatt ctgccttgcc aaagacatca gcgatttgaa agagcgtttg
     8941 ggcaacatcc tcgtcgccta cgccaaagac ggcagccccg tttacgccaa agatttgaag
     9001 gcacacggcg cgatggcggt cctgctcaaa gatgcgatta agcccaattt ggtgcaaacc
     9061 atcgaaggca cgcccgcctt cgtacacggc ggcccgttcg ccaacatcgc ccacggctgc
     9121 aactccgtaa ccgcaacccg tctggcgaaa caccttgccg attacgccgt aaccgaagca
     9181 ggcttcggcg cggatttggg cgcggaaaaa ttctgcgaca tcaaatgccg ccttgccgat
     9241 ttgaaacctg atgcggcggt cgtcgtggcg actgtccgcg ctttgaaata caacggcggc
     9301 gtggaacgtg ccaacctcgg tgaagaaaac ctcgaagcct tggcaaaagg tttgcccaac
     9361 ctgctgaaac acatttccaa cctgaaaaac gtattcggac tgcccgtcgt cgttgcgctc
     9421 aaccgcttcg tgtccgactc cgatgccgag ttggcgatga ttgaaaaagc ctgtgccgaa
     9481 cacggcgttg aagtttcctt gaccgaagtg tggggcaaag gcggcgtggg cggtgcagac
     9541 ttggcgcgca aagtcgtcaa cgccatcgaa aaccaaccga acaacttcaa tttttcctac
     9601 gatgttgagc tgagtattaa agacaaaatc cgtgcgattg cccaaaaagt gtacggcgcg
     9661 gaagatgttg atttcagcgc ggaagcgtct gccgaaatcg cctcgctgga aaaactgggc
     9721 ttggacaaaa tgccgatttg catggcgaaa acccaatatt ctttgagcga caacgccaaa
     9781 ctcttgggct gccctgaagg cttccgcatt accgtgcgcg gcattaccgt ttcttccggt
     9841 gctggtttca tcgttgcgtt gtgcggcaat atgatgaaaa tgccgggtct gcccaaagtt
     9901 cccgccgccg agaaaatcga cgtggacgca gaaggcgtga ttcacggctt gttctgaacg
     9961 gtttttgaaa ccagatgccg tctgaagccg tttcagacgg cattttttcg gaacgcgggc
    10021 ggcggtatgc tataatccgc cgttaaattt ctctattttc aggaaaaaac atgagtttga
    10081 aatgcggcat cgtcggtttg cccaacgtcg gcaaatccac cctttttaac gcgctgaccc
    10141 aatcgggtat cgaagcggca aactatcctt tctgtaccat cgaacccaac gtcggcatcg
    10201 tcgaagtccc cgatccgcgt atggccgaat tggcaaaaat cgtcaatccg caaaaaatgc
    10261 agcctgccat cgtcgaattt gtcgatattg ccggtttggt tgcaggcgcg agcaaaggcg
    10321 agggcttggg caaccagttc cttgccaaca tccgcgaaac cgatgcgatt gtgaatgtcg
    10381 tgcgctgctt tgacgacgac aacatcgtcc acgttgcagg ccgcgtcgat ccgattgccg
    10441 acatcgaaac catcggcaca gagttggcac ttgccgacct ggcaagtgtg gaaaaagcca
    10501 tcgtccgcga agaaaaacgc gcccgttcag gcgacaaaga cgcgcaaaag ctggtcgatt
    10561 tgtgcaaaaa actgctgccg catctggacg aaggcaaacc cgtgcgttcc ttcggtttgg
    10621 acgcggaaga acgcgcgatg ctcaaaccgc tgttcctgct gaccgccaaa ccggcgatgt
    10681 atgtgggcaa cgtcgccgaa gacggttttg aaaacaatcc gcacctcgaa cgcctgaaag
    10741 aattggcggc aaaagaaaac gcccccgtcg tcgccgtttg cgccgcaatg gaaagcgaaa
    10801 tcgccgaatt ggaagacgac gaaaaagccg agttcctcgc cgaaatgggc ttggaagaac
    10861 cgggcctgaa ccgcctgatc cgtgccggct acgacctttt ggggctgcaa acctacttta
    10921 ccgccggcgt gaaagaagtc cgcgcttgga cgatacacaa aggcgacacc gccccgcaag
    10981 ccgccggcgt gattcacacc gactttgagc gcggcttcat ccgcgcccaa gtcatttctt
    11041 acgacgactt tgtctcgctc ggcggcgaag ccaaagccaa agaagccggc aaaatgcgtg
    11101 tggaaggcaa ggaatacgtc gtgcaggatg gggatgtgat gcactttttg tttaacgtgt
    11161 aacccaaatg cggcaggttt tcagacggct ttgccgaaaa tgccgtctga agtcggtttt
    11221 ggtggctttc ggcgtttcca taccgccgga atgcggctgc atcaaaataa aatcccgccc
    11281 gcatttccga tttgccctcc ccgattcctg caaaacaaac cgcctgcccc gctgttgcaa
    11341 aaagccgtcc ggcattccga atatcccgag ccccgataca aaatgacctt tcagacggca
    11401 tttgcgccgc cgcgtttcga gtatagtgga ttaactt
//
LOCUS       DAWGKF010000058        10835 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.058, whole genome shotgun sequence.
ACCESSION   DAWGKF010000058 DAWGKF010000000
VERSION     DAWGKF010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10835)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10835)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10835
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.058"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            123..305
                     /locus_tag="WHR07_001057"
     CDS             123..305
                     /locus_tag="WHR07_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130277.1"
                     /translation="MFWYVIGFCSFVVALLSLWVNVGAFGMQEDDTPQSDYEKRLGLG
                     AKLKNKNTPDTEEKQQ"
     gene            complement(367..1368)
                     /locus_tag="WHR07_001058"
     CDS             complement(367..1368)
                     /locus_tag="WHR07_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HEZ2130278.1"
                     /translation="MIDGQTTEPKQKTRIILAPMQGLVDDVMRDLLTRIGGYDECVSE
                     FVRITHTVHSRSIWLKYVPEIANGNKTFSGTPCTVQLLGSDADNMAANALEAVRFGAN
                     KIDLNFGCPAPTVNKHKGGAILLKEPELIFHIVKTLRGRLPAHIPLTAKMRLGYEDKS
                     RALECACAIAEGGACGLTVHARTKAEGYEPPAHWEWIRKIRDSVNIPVTANGDVFSLQ
                     DYIGIKTISGCNSVMLGRGAVIRPDLARQIKQYENGGPVKDTDFAEVSKWIRQFFELC
                     LTKEANNKYPIARLKQWLGMMKKTFDPAQTLFDRVRTVKDADEVRRILNAFEHEINV"
     gene            complement(1445..5278)
                     /locus_tag="WHR07_001059"
     CDS             complement(1445..5278)
                     /locus_tag="WHR07_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/FMN-binding oxidoreductase"
                     /protein_id="HEZ2130279.1"
                     /translation="MTTTTAPQRIREIPYNYTSYTDREIVIRLLGDEAWQILQDLRGQ
                     RKTGRSARMLFEVLGDIWVVVRNPYLVDDLLEHPKRRAALVREMRHRLNEIRKRRDDN
                     RQVDVLVAAAEKAVERFDSSFDETSQKRRQILERLSKITKPHNIMFDGLARVTHVTDA
                     TDWRVEYPFVVVNPDTEAEVAPLVRALIELDLVIIPRGGGTGYTGGAIPLDAMSAVIN
                     TEKLDKHRGVEYVELAGLDGKHPIIRCGAGVVTRRVEETAHQAGLVFAVDPTSADASC
                     VGGNVAMNAGGKKAVLWGTALDNLAYWQMVNPQGEWLRIERVRHNFGKIHDEETAVFD
                     VHTLDSDGLNIVKTERLEIPGHKFRKVGLGKDVTDKFLSGLPGVQKEGTDGIITGVAF
                     VLHKMPKYTRTVCMEFFGTVATATPSIVEIRDFLLAHDSVRLAGLEHLDWRYVRAVGY
                     ATKAAGKGRPKMVLLADVVSDDEAAVEAAAEHICELARARDGEGFIAVSPEARKTFWL
                     DRSRTAAIAKHTNAFKINEDVVIPLERLGEYSDGIERINIELSIQNKLKLCAALEQYL
                     SGKLPIDKMGTDLPTAELLGERGKHALAHVAAVKERWDWLLANLDTPLADYKARYGAA
                     VHAAPEAKDNESCFTAFRDFRLRVSVKADVMKPLAEIFSGKTDTKIIQGLGKIHAKTV
                     RGRVFVALHMHAGDGNVHTNIPVNSDDAEMLQTAYRSVERIMKIARSLGGVISGEHGI
                     GITKLEFLSDEEMQPFWDYKNQVDPKHTFNRHKLMKGSDLRNAYTPSFELLGAESLIM
                     EKSDLGTIADSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQT
                     RRGVSVKHFEELMDIGDHCTVCHRCVKPCPVNIDFGDVTVAVRNYLADSGHKRFAPAA
                     AMGMAFLNATGPKTIKALRAAMIQTGFPAQNFAYKIGKLLPIGTKKQKAEPKATVGKA
                     PIKEQVIHFINRPLPKSVPAKTPRSLLGIEDGKSIPIIRNPAAPEDAEAVFYFPGCGS
                     ERLFSQIGLAVQAMLWHVGVQTVLPPGYMCCGYPQDAGGNKAKAEEMSTNNRVAFHRM
                     ANTLNYLDIKTVVVSCGTCYDQLEKYRFEEIFPGCRIIDIHEYLLEKGVKLDGVQGQQ
                     YLYHDPCHTPIKTMNATQMASSLMGQKVVLSDRCCGESGMFAVKRPDIATQVKFRKQE
                     EIEKNLKELPQGEPVKMLTSCPACLQGLSRYTDDNNMPADYIVIEMAKHILGENWLDE
                     FVKKANNGGVEKVLL"
     gene            5539..5635
                     /gene="ffs"
                     /locus_tag="WHR07_001060"
     ncRNA           5539..5635
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="WHR07_001060"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            5803..7494
                     /gene="dld"
                     /locus_tag="WHR07_001061"
     CDS             5803..7494
                     /gene="dld"
                     /locus_tag="WHR07_001061"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HEZ2130280.1"
                     /translation="MSASQLLSRLTQTVGEKYIITDPAKTEQYRQGYRFGEGKALAVV
                     RPGSILEMWKILQACVEADVIVITQAANTGLTGGSTPDGNDYDRDIVIVNTMRMNIIQ
                     TINNNEQVVCLPGSTLNQLELLLKPLGREPHSVIGSSCIGASVLGGVCNNSGGALVQR
                     GPAYTEMALFAQINEEGRLELVNHLGIDLGDTPEEILTNLQGHHYQNKDIKQDAGKGH
                     DHAYCEHVRQVDEPTAARFNADPARHYEASGCAGKLMVFAVRLDTFPQEKQTAVFYIG
                     TNDINELTDIRRAALGEFESLPVSGEYIHRHAFDIADVYGKDTFYVIKKFGTHQLPKL
                     FDLKARVDRFGKKASFLPKHFSDKAMQFVSKYLPDHLPKSMRDYRDKYEHHLILKMGG
                     KGVDEARAFLKEYFAHHSGAFFECNAEETQAAMLHRFAVASAAIRYRAVHDDEVEDLV
                     ALDIALRRDDRDWFEKLPSEIDNKIIHKLYYGHFMCHVFHQDYIIKKGNDCMALEHEM
                     LHLLDQRGAQYPAEHNVGHLYEAKPALKQFYRKLDPTNSFNPGVGKTSKKKNWAE"
     gene            7626..7733
                     /locus_tag="WHR07_001062"
                     /pseudo
     CDS             7626..7733
                     /locus_tag="WHR07_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            7789..8160
                     /locus_tag="WHR07_001063"
     CDS             7789..8160
                     /locus_tag="WHR07_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HEZ2130281.1"
                     /translation="MKPYKIYTHPALPPQAVKQGWSWPGLLFGTLWACFKRMWGLGLG
                     LTGAIFVLAVFAQLVYGDTPATDSAFNVLGLAVSVWFGAKGNSLYARHLLSRGYTELP
                     ETVEAANPQAALAQYFGRGGR"
     gene            8315..8863
                     /locus_tag="WHR07_001064"
     CDS             8315..8863
                     /locus_tag="WHR07_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEZ2130282.1"
                     /translation="MARLTVHTLETAPEAAKARVEAVLQNNGFIPNLIGVLSNAPEAL
                     AFYQEVGKLNAANSLTAGEVEVIQIIAARTNQCGFCVAGHTKLATLKKLLSEQSVKAA
                     RALAAGEFDDAKLGALAAFTQAVMAKKGAVSDDELKAFFDAGYNQQQAVEVVMGVALA
                     TLCNYVNNLGQTEINPELQAYA"
     gene            8998..10089
                     /locus_tag="WHR07_001065"
     CDS             8998..10089
                     /locus_tag="WHR07_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HEZ2130283.1"
                     /translation="MNAQTLIANVAEFVKTKLKPIVDDIDRKGYYPEAFMRELGAIGG
                     FGAVGTEAEGGNGLGLATQIAVLREIGKECGATSFSAWCQAACAWYLHQTPNRAVKDK
                     YLADILQGKVLAGTGMSNTVKHLADIEKHNLQAERVEGGYTVNGALPWVSNIGEDHIW
                     ANTAQIGGGYVMFITGGQWEGVSLQNCPEFCALEGTRTFSLNFKDVFIPDEDIIAAPE
                     QFADYIQSIKAGFILLQIGIGAGVIDGSLGIIRLANVVNAEVNRYLDDGYDSLKTRLD
                     GAWAETERLAGLAWSGTPDNLTTLKLREAAAVLTLAAAQSAALHSGAKGYLMRSPAQR
                     RVREAMFVAIVTPAIKHLRKEIAAIEAAK"
     gene            10561..10731
                     /locus_tag="WHR07_001066"
     CDS             10561..10731
                     /locus_tag="WHR07_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HEZ2130284.1"
                     /translation="MAQYMCGPCGWIYDEEHGDPEHGIPPGTKFEDIPDDWKCPECGV
                     GKEDFYLLDFVI"
BASE COUNT         2524 a         2979 c         2930 g         2402 t
ORIGIN      
        1 atttgtactg tcttcggctc gccgccttgt ccttatttaa atttaattca ctatatttgc
       61 ccgtgcgttt gtgataaatt cggcactgta tttgatatga ttttaacaaa tcgggagggg
      121 caatgttttg gtatgtaatc ggcttttgct cctttgtcgt cgcgctgctg tcgctgtggg
      181 tcaatgtcgg cgcattcggt atgcaggaag acgatacccc gcaatcggat tatgaaaaac
      241 gtttgggctt gggtgcgaag ctgaaaaaca aaaatacgcc ggatacggaa gaaaagcagc
      301 aataaagata tgaaatgccg tctgaaagat tttcagacgg catttgcttt gaagcatggg
      361 agacagtcaa acatttatct catgctcaaa tgcgttcagg attcggcgga cttcatccgc
      421 atccttaacc gttcggacgc ggtcaaacag cgtttgcgcc gggtcgaacg tttttttcat
      481 catgcccaac cattgcttaa gacgggcgat cgggtattta ttgtttgcct cttttgtcag
      541 gcacagctcg aaaaactgcc gtatccattt agaaacttcg gcaaaatccg tgtctttgac
      601 cggcccgccg ttctcgtatt gcttgatttg ccgcgccaaa tcggggcgga tgaccgcgcc
      661 gcgaccgagc atcacgctgt tgcagccgct gattgttttg atgccgatat agtcttgcag
      721 gctgaaaacg tcgccgttgg cggtaacggg aatattgacg ctgtctcgga ttttccttat
      781 ccattcccaa tgcgccggcg gttcgtaacc ctcggctttg gtacgcgcgt gtacggtcag
      841 tccgcatgcg cccccttcgg caatcgcaca ggcgcattcc aaagcccggc ttttgtcttc
      901 gtaaccgagc cgcatttttg cggtgagcgg aatatgtgcg ggcaaacgtc cgcgcagcgt
      961 tttgacgatg tggaatatca gttccggctc ttttaaaagg attgcgccgc ctttgtgttt
     1021 gttgacggtg ggcgcggggc agccgaagtt caaatcgatt ttgttcgcac cgaagcggac
     1081 ggcttccagc gcattcgccg ccatattgtc cgcatcgctg cccaaaagtt ggacggtgca
     1141 gggcgtgccg gaaaacgttt tgtttccgtt ggcgatttcg gggacatatt ttaaccatat
     1201 ggatcgggaa tgcacggtat gggtaatgcg tacaaattcg ctgacgcatt cgtcgtagcc
     1261 gccaatacgc gtcagcaggt cgcgcatcac gtcatcgacc agaccctgca taggggcaag
     1321 gatgattcgg gttttttgtt tgggttcggt tgtttgtccg tcaatcatga ttcgggtagg
     1381 tatttgattc aaacaatgcc gtctgaaggc tttcggcgtt cagacggcat ttccgtgtcc
     1441 gttgttacag caatactttt tccacgccgc cgttgttggc ttttttcaca aactcgtcta
     1501 gccagttttc gccgaggatg tgtttcgcca tttcgatgac gatgtagtcg gcaggcatat
     1561 tgttgtcgtc ggtgtagcgg ctcaagcctt gcaggcaggc tgggcaggaa gtaagcattt
     1621 tgacgggttc accctgcggc agctctttga ggtttttctc gatttcctct tgtttgcgga
     1681 atttgacttg ggtggcgata tcgggtcgtt tgacggcgaa cataccggac tcgccgcagc
     1741 agcggtcgct taagacgact ttctgcccca tcaggctgct ggccatttgg gtggcgttca
     1801 tggttttgat gggggtgtgg caggggtcgt ggtagaggta ttgctgacct tgcacgccgt
     1861 cgagtttcac gcctttttcg agcaggtatt cgtggatgtc gatgatgcgg cagccgggga
     1921 agatttcttc aaagcggtat ttttcgagct ggtcgtaaca agtgccgcaa ctgacaacga
     1981 cggtcttaat gtcgaggtag ttgagggtgt ttgccatacg gtggaaagcc acgcggttgt
     2041 tggtgctcat ttcttcggct ttagccttgt tgccgcccgc gtcttgcgga tagccgcaac
     2101 acatatagcc gggcggcagg acggtttgta cgccgacgtg ccagagcatg gcttgaacgg
     2161 caagtccgat ttggctgaac aggcgttccg aaccgcaacc cgggaagtag aacacggctt
     2221 cggcatcttc gggcgcggcg gggttgcgga tgatggggat gcttttgccg tcttcgatgc
     2281 ccaataagga gcgcggtgtt ttggcgggta cgcttttcgg caaaggacgg ttgatgaaat
     2341 ggataacctg ttctttaatt ggggctttgc cgacggttgc cttgggttcg gctttttgct
     2401 ttttcgtgcc gatcggaaga agcttgccga ttttgtaggc aaagttttgc gctgggaagc
     2461 cggtctgtat catggcggcg cgaagggctt tgatggtttt cgggccggtg gcgttcaaaa
     2521 acgccatacc catagctgcg gcaggcgcaa atcgtttgtg gccggaatcg gcaaggtagt
     2581 tgcggacggc tacggttacg tcgccgaagt cgatgttgac ggggcagggt ttgacgcagc
     2641 ggtggcacac ggtgcagtgg tcgccgatgt ccatgagttc ttcaaagtgt ttgacggaaa
     2701 cgccgcggcg ggtttgttct tcgtataaga aggcttcggt cagcaagccc acgccgagga
     2761 ttttgttgcg cggactgtac agcaggttgg cacgcggaac gtgagtagag cagacgggtt
     2821 tgcatttgcc gcagcgcagg cagtctttga cggaatcggc aatcgtgccg aggtctgatt
     2881 tttccataat cagcgattcc gcgcccaaaa gctcgaaaga cggcgtgtag gcgttgcgta
     2941 agtccgagcc tttcatcagt ttgtggcggt tgaaggtgtg tttgggatcg acttggtttt
     3001 tgtagtccca aaacggctgc atttcttcat cgcttaaaaa ttcgagcttg gtgatgccga
     3061 tgccgtgttc gccggaaatt acgccgccga gcgaacgggc gattttcata atgcgttcga
     3121 ccgaacggta ggctgtctga agcatttcgg catcgtctga gttgaccgga atattggtgt
     3181 ggacattgcc gtcgccggcg tgcatatgca gggcgacaaa gactctgccg cgtacggttt
     3241 tggcgtggat tttgcccaag ccttggataa tcttggtatc ggttttgccg ctgaagattt
     3301 cggcgagtgg tttcattacg tctgctttga cagacacgcg caggcggaaa tcgcggaatg
     3361 cggtaaagca gctttcattg tctttggctt cgggcgcggc gtggacggct gcaccgtagc
     3421 gggctttgta gtcggcaagc ggcgtgtcca aattggcgag caaccagtcc caacgttctt
     3481 tgacggcggc aacgtgggcc aaggcgtgtt tgccgcgttc gcccaaaagt tcggcggtcg
     3541 gcaggtcagt gcccattttg tcgatgggga gtttgcccga aagatattgc tccaaggcgg
     3601 cacagagttt gagcttgttt tggatggaaa gctcaatgtt gatgcgttcg atgccgtccg
     3661 aatactcgcc gagcctttcg agcgggatga ccacgtcttc gttaatttta aaggcgttgg
     3721 tgtgcttggc gatggcggcg gtgcggctgc ggtcgagcca aaaggttttg cgcgcttcgg
     3781 gagacacggc gataaagcct tcgccatcgc gggcgcgggc aagttcgcaa atgtgttcgg
     3841 cggctgcctc tacggcggct tcgtcgtcgg aaaccacgtc cgccagcaag accattttcg
     3901 gccgtccctt gcccgccgct ttggttgcgt agccgacggc gcggacgtaa cgccagtcca
     3961 aatgttccaa acctgccagc cgaacgctgt cgtgggcgag caggaaatcg cggatttcga
     4021 cgatagaagg cgtagcggtg gcgaccgtgc cgaaaaactc catacacaca gtgcgcgtgt
     4081 atttcggcat tttgtgcaac acgaaagcaa cgccggtgat gatgccgtcc gtgccttctt
     4141 tctgtacgcc gggcaggccg ctcaagaatt tgtcggtaac gtctttgccc aaaccgactt
     4201 tgcgaaattt gtggccggga atttccaaac gttcggtttt aacgatattg aggccgtctg
     4261 aatccagcgt atgtacgtca aacacggcgg tttcttcatc gtggattttg ccgaaattgt
     4321 ggcgcacgcg ctcgatacgc agccattcgc cttgagggtt gaccatctgc cagtaggcga
     4381 ggttgtccaa cgccgtcccc cacaacacgg cttttttgcc gcccgcgttc atcgccacat
     4441 tgccgcccac gcaggacgca tcggcagaag tcggatcgac ggcgaacacc aaacctgcct
     4501 gatgcgcggt ttcttccacc cgccgcgtaa ccacgcccgc gccgcaccgg ataatcggat
     4561 gcttgccgtc caatcctgcc agctcaacgt attccacgcc gcgatgcttg tcgagctttt
     4621 cggtattgat gaccgcgctc attgcgtcca aaggaatcgc gcctccggta taacccgtgc
     4681 cgccgccgcg cgggataata accaagtcca attcgattaa agcgcgcacc aaaggcgcga
     4741 cttccgcctc cgtgtcggga ttgacgacga caaacggata ctccacgcgc cagtcggttg
     4801 catcggtaac gtgcgttacc cgcgccagcc cgtcgaacat aatattgtgc ggcttggtga
     4861 ttttgctcaa acgctccaaa atctgccgcc gtttttggct ggtttcatca aaactgctat
     4921 caaaacgctc gactgctttt tctgctgcgg caaccaacac atccacttgc cgattatcgt
     4981 cgcggcgttt gcggatttca tttaagcggt ggcgcatttc acgtaccagc gcggcgcggc
     5041 gttttgggtg ctccagcaag tcatcgacca gatacggatt gcgcacgacc acccaaatat
     5101 cgcccaacac ttcaaacagc atccgcgccg aacgcccggt tttgcgctgt ccgcgcaagt
     5161 cttgcaggat ttgccacgcc tcatcgccca gtaggcggat gacgatttcg cggtcggtgt
     5221 aggaagtata gttgtaggga atttcccgaa tacgctgagg ggcggtagtc gtggtcatgg
     5281 tgtgtccgtg tttggcagtt tttatttgaa tgccgtctga aaattcggtt tcaggcgggt
     5341 ttgaaaaggc gataatgtag ttcaattttt gatatttttc aatgccgaaa caggaaatac
     5401 ccttatagaa acaaaataac gctttgagaa attgttgaca atattatcaa atataaattt
     5461 taggtggtgt ttccggcgta tgaccgtatc aaaacggttg agtttttcag aaaacccgtt
     5521 ataatgccgt ttctctgagg cgggtctccc cgcatggcaa atcggaacac cgggtcaggg
     5581 gcggaagcca gcagcccact ccgatgcgcc agtgccgggg gtttggcccg ccgccctatt
     5641 tgaaacgccg gagctttgat gttccggcgt tcccgtatcg caccgttgcc gtctgaaagc
     5701 cgttcagacg gcattttctt tactttgcca taacgtataa ctacaatgtg aaaacaattc
     5761 caatgtgcat atgcacctgc cgacaatttt aaggaaactg ccatgagcgc atcacaatta
     5821 ctgtcaagac tgacccaaac cgtaggcgaa aaatacatca tcaccgaccc cgcgaaaacc
     5881 gaacaatacc gccaaggcta ccgcttcggc gagggtaagg cgttggcggt ggttcgcccc
     5941 ggaagcattc tggaaatgtg gaaaattctg caggcgtgcg tcgaagcaga cgtgattgtg
     6001 attacgcagg cggcgaatac cggactgacc ggcggttcga cccccgacgg caacgattac
     6061 gaccgcgaca tcgtgattgt gaacaccatg cggatgaaca tcatccaaac catcaacaac
     6121 aacgaacaag tcgtctgtct gcccggttcg accctgaacc agcttgaatt gctgctgaaa
     6181 cctttggggc gcgaaccgca ttcggtcatc ggctcatcct gtatcggcgc gtccgtcttg
     6241 ggcggcgtgt gcaacaactc cggcggcgcg ttggtacagc gcggcccggc ctacaccgaa
     6301 atggcgttgt tcgcccaaat caacgaagaa ggcaggttgg aactggtcaa ccacttgggc
     6361 atagacttgg gcgacacgcc cgaagaaatc ctgaccaacc tgcaaggtca tcattatcaa
     6421 aacaaagaca tcaaacaaga cgcgggcaaa ggacacgacc acgcctattg cgaacacgtc
     6481 cgccaagtgg acgaaccgac cgccgcgcgt ttcaatgccg accccgcccg ccattacgaa
     6541 gcctcgggct gcgcgggcaa actgatggtt tttgccgtcc gtttggacac cttcccgcaa
     6601 gaaaaacaaa ccgccgtgtt ctacatcggc acgaacgaca tcaacgagct gaccgacatc
     6661 cgccgcgccg ccttgggcga atttgaaagc ctgcctgttt ccggcgaata catccaccgc
     6721 cacgctttcg atattgccga cgtgtacggc aaagacacgt tttacgtcat caaaaaattc
     6781 ggtacgcacc aactgccgaa attatttgac ttgaaggcgc gcgtggacag gttcggcaaa
     6841 aaagccagct tcctgcccaa acatttttcc gacaaggcca tgcagttcgt cagcaaatac
     6901 ctgcccgacc acctgcccaa atccatgcgc gattaccgcg acaaatacga acaccacctg
     6961 attctgaaaa tgggcgggaa aggcgtggat gaggcgcgcg cgttcttaaa agaatatttt
     7021 gcacaccaca gcggcgcgtt tttcgagtgc aacgccgaag aaacccaagc cgcgatgctg
     7081 caccgtttcg ccgtcgcctc cgccgccatc cgctaccgcg ccgtgcatga tgacgaagtg
     7141 gaagacttgg tcgcgctcga catcgccctg cgccgcgacg atcgcgactg gtttgaaaaa
     7201 ctgccgtcgg aaatcgacaa taaaatcatc cataaactct actatggaca tttcatgtgc
     7261 cacgttttcc atcaggatta catcatcaaa aaaggcaacg actgcatggc gttggaacac
     7321 gaaatgctgc atcttttaga ccaacgcggc gcgcaatatc ccgccgaaca caacgtcggt
     7381 catttgtatg aagccaaacc cgcgctcaaa cagttttacc gcaaacttga cccgaccaac
     7441 agcttcaacc cgggcgtagg caaaaccagc aaaaagaaaa actgggcgga ataagcgcgt
     7501 ccgctttgaa ggcaggcaat gccgtctgaa ggcaaaacgc cgttcagacg gcattgtcgg
     7561 gtttgaagtt ccccatcggg taatcgcttt caagccgtat gccggcacag gcgcgcgcgc
     7621 ctcccaaata tagtggatta aatttaaatc aggacaaggc aacgaagccg cagacagtac
     7681 agatagtacg gcaaggcgag gtaacgccgt actggtttaa atttaatcca ctataaagtc
     7741 tgatcctacc ttcccaaagg gcagggtttc aaccgaaaag gaaacacgat gaaaccatac
     7801 aaaatctaca cccatcccgc cctgccgccc caagccgtca aacaaggctg gtcgtggccg
     7861 ggccttttgt tcggcacgct gtgggcgtgt ttcaaaagaa tgtggggttt ggggctgggg
     7921 ctgacgggcg cgatattcgt gctggcggtg tttgcccaac tggtttacgg cgacacgccc
     7981 gccacagact cggcgtttaa cgtattgggc ttggcggttt ccgtctggtt cggcgcaaag
     8041 ggcaacagcc tttatgcacg ccacctttta tcgcgcggct ataccgaatt gcccgaaacg
     8101 gttgaggcag ccaatcccca agccgcattg gcgcaatatt tcgggcgcgg gggccgataa
     8161 gcgcgttttc ttttccatca tgccgtctga aaaatgttca gacggcattt cttataacct
     8221 tttgtttgca gcacataacc aatcagtctt tcctattccg ttccgaaatg cataccatgc
     8281 gcccgtaccc aatatttgcg aacaaggaaa gaaaatggca cgtttaaccg tacacaccct
     8341 cgaaaccgcc cccgaagccg ccaaagcgcg cgtcgaggcg gtacttcaaa acaacggctt
     8401 tatccccaac cttatcggcg tattatcaaa cgcccccgaa gccttggcgt tttaccaaga
     8461 agtcggcaag ctcaacgccg ccaacagcct gaccgctggc gaagtcgaag tcatccagat
     8521 catcgccgcc cgtaccaacc aatgcggttt ttgcgtggca gggcacacca aactcgcaac
     8581 cctgaaaaaa ctcctgtccg aacaatccgt caaagccgcg cgcgctttgg cagcaggcga
     8641 atttgacgat gccaaactcg gcgcgctcgc cgccttcacc caagccgtaa tggcgaaaaa
     8701 aggcgcggta tccgatgacg aactcaaagc atttttcgac gcgggctaca accagcagca
     8761 ggcagttgaa gtcgtgatgg gcgtagcctt ggcaactttg tgcaactacg tcaacaacct
     8821 cggacaaacc gaaatcaacc ccgaattgca ggcttacgcc tgatacggca aaccgcccga
     8881 atatcgggcg gtttttcaaa aacaccccct caaacaaaaa caagccgcct aagcggcagg
     8941 gaagcagccg cgcatcaggc gcgcccccga tttccccgca aaccttaagg aacaaagatg
     9001 aacgcccaaa ccctgattgc caacgttgcc gaattcgtca aaaccaagct caaacccata
     9061 gtggacgaca tcgaccgcaa aggatactac cccgaagcat ttatgcgcga actcggcgca
     9121 atcggtggat tcggcgcagt cggtacagaa gccgaaggcg gcaacggctt gggtttggca
     9181 acgcaaatcg ccgtattgcg cgaaatcggc aaagaatgcg gcgcaacctc tttcagtgcg
     9241 tggtgtcagg cggcttgcgc gtggtatctg caccaaacgc ccaaccgggc cgtcaaagac
     9301 aaataccttg ccgacatcct gcaaggcaaa gtattggcgg gtacgggcat gtccaatacc
     9361 gtcaaacacc ttgccgacat cgaaaaacac aacctccaag ccgagcgcgt ggagggcggc
     9421 tacacagtca acggcgcgct gccgtgggtg tccaacatcg gcgaagacca catttgggcg
     9481 aataccgccc aaatcggcgg cggctacgtc atgttcatca caggcggaca atgggaaggc
     9541 gtaagcctgc aaaactgccc cgaattttgc gccctcgaag gcacgcgcac cttcagcctg
     9601 aacttcaaag acgtatttat ccccgacgaa gacatcatcg ccgcgcccga acagtttgcc
     9661 gactacatcc aaagcatcaa agcaggcttt atcctcctgc aaatcggcat cggcgcgggc
     9721 gtgatagacg gcagcctcgg catcatccgc ctcgccaacg tcgtcaacgc cgaagtcaac
     9781 cgctatctcg acgacggcta cgacagcctc aaaacaaggc tggacggcgc gtgggcagaa
     9841 accgaacggc tcgccggatt ggcttggagc ggcacgcccg acaaccttac caccctcaag
     9901 ctgcgcgaag ccgccgccgt actgacactt gccgccgccc aatccgccgc cctgcattcc
     9961 ggcgcaaaag gctacctgat gcggagtccc gcccaaaggc gcgtccgcga agcaatgttt
    10021 gtcgccatcg taactcccgc gatcaaacac ctccgcaaag aaatagcggc aatcgaagcc
    10081 gcaaaataaa caggcggaaa aaaccgaaac ccccatcgcg tcattcccgc gaaagcggga
    10141 atccagcccc caacgcaaca ggaatccatc ggaaaaaaca gaaaccccca aaccgtcatt
    10201 cccgcaaaag cgggaatcca gccccctaac gcaacaggaa tccatcgaaa aaaccgaaac
    10261 ctccaaaccg tcattcccac ggaagtggga atccagtaac cgaaaaacca caggaatcta
    10321 tcgaaaaaaa acccaacccc caaaaaaacc gggcggatac ctcaccatcc tcccaaaccc
    10381 tgatttatag cggatgaaca aaaatcaggg caagacggcg aaaccgcaga cagtacaaat
    10441 agtacgaaac cgattcactt ggtgcttgag caccttagag aatcgttctc tttgagctaa
    10501 ggcgaggcaa cgccgtactg gtttttgttc atccgctata caaaaaacaa ggaaacacaa
    10561 atggcgcaat atatgtgcgg cccctgcggc tggatttacg atgaagaaca cggcgacccc
    10621 gaacacggca tcccccctgg gacaaagttt gaagacatcc ccgacgactg gaaatgcccc
    10681 gaatgcggcg tgggcaaaga agatttctac ctgttggatt tcgtgatata gcggcagccg
    10741 cacccttagg gaaaaccccg tcatccggcg ttccgcctgc ggcggcaggg aacgccgttt
    10801 tatagtggat taacaaaaat caggacaagg cgacg
//
LOCUS       DAWGKF010000059        10789 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.059, whole genome shotgun sequence.
ACCESSION   DAWGKF010000059 DAWGKF010000000
VERSION     DAWGKF010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10789)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10789)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10789
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.059"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            154..1038
                     /locus_tag="WHR07_001067"
     CDS             154..1038
                     /locus_tag="WHR07_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HEZ2130285.1"
                     /translation="MSSGNIHIHSMTGFANAAAECGSKRINLDLRAVNHRFLDIQIRM
                     PDDLRYLESGIREKISSHIARGKVECKIQIQDAENGSQSLELNRDLVGQLAEINKDLR
                     KHHDLAKLGVADILRFPGVLASQRENTEELAKSITELTEKALKDFTAARKREGKKLGE
                     HLLQRLEAMEEIIDALSELFPTLLETHKEKIRARLVEAVGSIDNDRLQQEFALFIQKS
                     DIDEEFSRLRTHIAEVRRIVTEHKGSSGKRLDFLMQELNREANTLGSKSIATECTQAS
                     VELKVLIEQMREQVQNIE"
     gene            complement(1122..1637)
                     /locus_tag="WHR07_001068"
     CDS             complement(1122..1637)
                     /locus_tag="WHR07_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEZ2130286.1"
                     /translation="MMILKTAPLKRRFAAMLYEMLLVGAATCLAALFAGIAAIFLNPV
                     SIAVSALVTSILIMGSWWLYFRANWHGQGQTLAMRTWKIGLCDLNGIQPSLYLLRLRF
                     IWACIFIVFIPMLAYAGLRHFLGIPPKGAAGAALIWLILPWGFALLNPDRQFLYDFLA
                     GTRLVAVKGKP"
     gene            complement(1713..2132)
                     /locus_tag="WHR07_001069"
     CDS             complement(1713..2132)
                     /locus_tag="WHR07_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130287.1"
                     /translation="MDNKTKLRLGGLILLTTAVLSLIIVLIVDSWPLAILLAAIIVAA
                     AAGGFVWTSRRQQRQFIERLKKFDIDPEKGRINEANLRRMYHSGGQHQKDAITLICLS
                     QKCSVDEAHAMFKKRPTRQEINQMAAKQSRGQKRPHR"
     gene            complement(2253..3251)
                     /locus_tag="WHR07_001070"
     CDS             complement(2253..3251)
                     /locus_tag="WHR07_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEZ2130288.1"
                     /translation="MAAHIGRIDTDAPLKPLYVIHGEEELLRIEALDALRAAAKKQGY
                     LNREVYTADNAFDWNELLQTAGSAGLFADLKLLELHIPNGKPSKTGGEALQDFAARLP
                     EDTVTLVLLPKLEKTQLQSKWFAALAAKGEVWEAKPVGAAALPQWIRGRLDKIGLGIG
                     ADALALFAERVEGNLLAARQEIDKLALLYPKGHTVNIDEAQTAVANVARFDAFQLAGA
                     WMKGDVLRVCRLLDGLREEGEEPVLLLWAVAEDVRTLIRLAAALKQGQSIQSVRNSLR
                     LWGDKQTLAPLAVKRISVVRLLDALKTCAQIDRIIKGAEEGDAWTVFKRLVVSLAE"
     gene            complement(3253..3732)
                     /locus_tag="WHR07_001071"
     CDS             complement(3253..3732)
                     /locus_tag="WHR07_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130289.1"
                     /translation="MNKLFLTAAVLMLGACGFHLKGADGISPPLTYRSWHIEGGQALQ
                     FPLETALYQASGRVDDAAGAQMTLRIDSVSQNKETYTVTRAAVINEYLLILTVEAQVL
                     KRGEPVGKPMTVSVRRVLAYADNEILGKQEEEAALWAEMRQDAAEQIVRRLTFLKAE"
     gene            complement(3784..4563)
                     /gene="pgeF"
                     /locus_tag="WHR07_001072"
     CDS             complement(3784..4563)
                     /gene="pgeF"
                     /locus_tag="WHR07_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HEZ2130290.1"
                     /translation="MKTITETLNLAPKGKNFLTADWPAPANVKTLITTRNGGVSQGAY
                     QSLNLGTHVGDNPEAVRRNREIVQQQVGLPVAYLNQIHSTIVVNAAEALDGTPDADAS
                     VDDTGKVACAVMTADCLPVLFCDRAGTTVAAAHAGWRGLAGGVLQNTIAAMKVPPVEM
                     MAYLGPAISADAFEVGQDVFDAFCTPMPEAAAAFEGIGGGKFLADLYALARLILKREG
                     VGGVYGGTHCTVLERDTFFSYRRDGATGRMASLIWLDGNAV"
     gene            5170..6117
                     /locus_tag="WHR07_001073"
     CDS             5170..6117
                     /locus_tag="WHR07_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HEZ2130291.1"
                     /translation="MNILSKISSFIGKTFSLWAALFAAAAFFAPDTFKWAGPYIPWLL
                     GIIMFGMGLTLKPSDFDILFKHPKAVIIGVIAQFAIMPATAWLLSKLLNLPAEIAVGV
                     ILVGCCPGGTASNVMTYLARGNVALSVAVTSVSTLISPLLTPAIFLMLAGEMLEIQAA
                     GMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKI
                     MESGLLIFAVVALHNGIGYLLGFFAAKWTGLPYDAQKTLAIEVGMQNSGLAAALAAAH
                     FAAAPVVAVPGALFSVWHNISGSLLATYWAAKAGKHKKP"
     gene            complement(6269..7393)
                     /gene="rluD"
                     /locus_tag="WHR07_001074"
     CDS             complement(6269..7393)
                     /gene="rluD"
                     /locus_tag="WHR07_001074"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HEZ2130292.1"
                     /translation="MQNTSFDNESDYSDDSDFASASETENRIGLTVPLELAGGRLDAV
                     LAKLLPDYSRSRLTLWIKEGAVIVNDKPSQPKDKMIGGEQIRVTVRPSEENLAFVPEP
                     MALDIVYEDDTVIVVNKPAGLVVHPAAGNWRGTLLNGLLAHCPELSQVPRAGIVHRLD
                     KETSGLMVVAKTLPAQNSLVRQLQERTVKRIYRAVANGIVPFDGKIETQIGRDPHNRL
                     KMAVVKFGGKPAVTHVKVLERYLTHSYIECSLETGRTHQIRVHMREANHPLAGDPVYG
                     NPRHPCSDPVKEAVKSLGARQALHAYRLSFTHPESGETVSFEAPIPDDIYHLLSVLRL
                     EAGLDSSLSNEEEWQDKFGADDDDDWNEDDYDVEVVYVRE"
     gene            7392..8195
                     /locus_tag="WHR07_001075"
     CDS             7392..8195
                     /locus_tag="WHR07_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HEZ2130293.1"
                     /translation="MKKILLTVSLGLALSACATQGTVDKDAQITQDWSVEKLYAEAQD
                     ELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLH
                     PQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNS
                     KYAADATARMVKLVDALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESL
                     AILELAYQKLGKPQLAADTRRVLETNFPKSPFLTHAWQPDDMPWWRYWH"
     gene            complement(8253..10472)
                     /locus_tag="WHR07_001076"
     CDS             complement(8253..10472)
                     /locus_tag="WHR07_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HEZ2130294.1"
                     /translation="MFRRWFLPCWVVGAAASFALPVVPHWLFWLAAFAVFAVFARRFA
                     FAGLMLCVLAGAAYGVFRTEAALSSQWRAEAVSGVPLTVEVADMPRSDGRRVQFAAKA
                     VDSGGRTFDLLLSDYKRREWAVGSRWRITARVHPVVGELNLRGLNREAWALSNGIGGA
                     GTVGADRVLLHGGSGWGIAVWRSRISRNWQQADADGGLSDGIGLMRALSVGEQSALRP
                     ELWQAFRPLGLTHLVSISGLHVTMVAVMFAWLAKRLLACSPRLPARPRAWVLAAGCAG
                     ALFYALLAGFSVPTQRSVLMLAAFAWAWRRGRLSAWATWWQALAAVLLFDPSAVLGVG
                     TWLSFGLVAALIWACSGRLHEGKRQTAVRGQWAASVLSLVLLGYLFASLPLISPLVNA
                     VAIPWFSWVLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLADVSPEFAVAAAPLP
                     LLVLAVCAALLLLLPRGLGLRPWAVLLLAGFVFYRSPGVPENEVAVTVWDAGQGLSVS
                     VQTANHHLLFDTGTAAAAQMGIVPSLNAAGVRRLDKLVLSHHDSDHDGGFQAVGKIPN
                     GGIYAGQPEFYEGARHCAEQRWQWDGVDFEFLMPSERKNIDDNGKSCVLRVVAGGAAL
                     LVTGDLDTKGEESLVGKYGGNLYSQVLVLGHHGSNTSSSGVFLNAVSPEYAVASSGYA
                     NAYKHPTEAVQNRIRAHGIKLLRTDLSGALQFGLGRGGVKAQRLRGYKFYWQKKPFE"
BASE COUNT         2568 a         3225 c         2708 g         2288 t
ORIGIN      
        1 gttaatccac tatacatttc ccttccttgc agcaacaaaa gcgcgtgatt ccaatctgcc
       61 gctgcaaaat cttcaatttt tcacacccga aaacgcttgc cgccatacag atgtgatata
      121 ttgattccat tttaacgggc ttcggagaac gacatgagca gcggaaatat ccacatccac
      181 agcatgaccg gatttgccaa cgcggcggca gagtgcggca gcaaacgcat caatctcgac
      241 ctgcgtgcgg tcaaccaccg ttttctagat attcaaatca ggatgcccga cgatttgcgc
      301 tatttggaaa gcggtatccg cgagaaaatt tcatcccata tcgcacgcgg caaagtcgaa
      361 tgcaaaatcc aaattcaaga tgcggaaaac ggcagtcagt ccttggaact gaatcgcgac
      421 ttggtcggac agcttgccga aatcaacaaa gacctccgca agcatcacga tttggcaaaa
      481 ctgggcgttg ccgacatcct gcgtttcccc ggcgtattgg caagccaaag ggaaaatacg
      541 gaagaattgg caaaaagcat taccgaactg accgaaaaag cgttaaaaga ctttactgcc
      601 gcacgcaagc gggaaggtaa gaaattaggc gagcacctgc tgcaacgcct tgaggctatg
      661 gaagaaatca tagatgcatt aagcgaactc tttcctaccc tgttggaaac acataaagaa
      721 aaaatccgcg cccgcctcgt cgaagcggtc ggcagcatcg acaacgaccg cctgcaacag
      781 gaatttgccc tctttatcca aaaatccgac atcgacgaag agttcagccg cctacgcacc
      841 cacattgccg aagtgcgccg tatcgttacc gaacacaaag gcagcagcgg caaacggctg
      901 gacttcctga tgcaggaatt aaaccgcgaa gccaacactt tgggcagcaa atccatcgct
      961 accgaatgca cccaagcctc ggtcgagctg aaagtcctga tcgaacagat gcgcgaacaa
     1021 gtgcagaata tcgaataatc ggtttccccg ataagcaaat gccgtctgaa agccctttca
     1081 gacggcattt tttcagtttg aaacctttgc ggtataaagg cttaaggctt tcctttgacc
     1141 gccaccaatc ttgttcctgc aagaaaatca tacagaaact gccggtcggg attcagcagt
     1201 gcgaaccccc acggtaaaat cagccaaatc aatgccgcgc cggccgcgcc cttgggcgga
     1261 atgccgagga agtggcgcaa tccggcataa gcaagcatag gaatgaagac gatgaatatg
     1321 cacgcccaaa taaagcgcag gcgcaacagg tacaaagacg gctgtatgcc gttaaggtcg
     1381 cacaagccga ttttccatgt cctcatcgcc aaggtctgcc cctgaccgtg ccagttggcg
     1441 cgaaaataaa gccaccatga tcccattatc aggatactcg ttaccaatgc agaaaccgcg
     1501 atagaaacgg gattcagaaa aatggcggca ataccggcaa acaatgctgc caaacaggtt
     1561 gccgcaccga ccagcagcat ctcatacagc atggcggcaa agcggcgttt gagcggggcg
     1621 gttttcagta tcatcatctt ttcaatcaga atatgccgtc tgaaacgcca acaggcttca
     1681 gacggcattt atgcaaagat gccttgcggc ggttaacggt gcggacgttt ctgaccgcgc
     1741 gactgttttg ccgccatttg attgatttcc tgacgtgtcg ggcgtttttt gaacatagcg
     1801 tgcgcctcgt ccaccgaaca tttttgcgac aggcagatca gggtaatcgc atctttctgg
     1861 tgttgtccgc cgctgtggta catacggcgc aggtttgcct cgttgattct gcctttttcg
     1921 ggatcgatgt cgaatttttt caggcgttcg ataaactggc gttgctgtcg gcgggatgtc
     1981 caaacaaaac cgcccgcagc ggcggcgacg atgatggcgg caagcaggat ggcaagcggc
     2041 caggaatcga caatcaatac gataatgagg cttaaaacgg cggtggtcag taaaatcagg
     2101 ccgcccaagc gcagtttggt cttattgtcc atagggttaa tgttccttta ttgaggtggt
     2161 cgtgccgtct gaaatgtttt cggacggatt ggtgaatact tttcaggatt aacggtattt
     2221 tacagtattt tcggattttg gggattaccg ctttattccg ccagcgacac gacaagccgt
     2281 ttgaataccg tccatgcgtc gccctcttcc gcgcctttga tgattcggtc gatttgggca
     2341 caggttttga gcgcgtcaag caggcggacg acggaaatcc gcttgactgc aagcggtgcg
     2401 agcgtctgct tgtcgcccca aagcctaagg ctgttgcgga cggattggat gctctgcccc
     2461 tgcttcaggg cggcagcaag ccggatcagc gtccgcacgt cttcggcaac cgcccacagc
     2521 aacagcaccg gttcttcgcc ctcttcccgc aatccgtcca aaagcctgca tacgcgcagg
     2581 acatcgccct tcatccacgc gcctgccagt tggaacgcgt cgaagcgggc gacgttggca
     2641 acggcggttt gcgcctcatc gatattgacg gtatgccctt tcggatacag cagcgcgagc
     2701 ttgtcgattt cctgacgtgc cgccaacaga ttgccttcca cgcgctcggc aaacagtgcc
     2761 aatgcgtctg ccccgatacc caaaccgatt ttgtccagcc gtccgcgtat ccattggggc
     2821 aaagccgccg cgccgaccgg tttggcttcc cacacttccc cctttgccgc caatgcggca
     2881 aaccatttgg actggagctg ggttttctcc agtttgggca gtaaaaccag cgttaccgta
     2941 tcttccggca ggcgggcggc aaaatcctgc aacgcctcgc cgccggtttt gctgggcttg
     3001 ccgttaggga tatgcagttc caacagcttc aaatcggcaa acagacccgc actgcctgcg
     3061 gtttgcagca gctcgttcca atcgaaagca ttgtctgccg tataaacttc ccgattaagg
     3121 taaccttgtt tcttcgccgc cgccctcaat gcgtccaatg cctcgatacg caacagttct
     3181 tcctcgccgt ggatgacgta caggggtttc aaaggcgcgt ccgtatcaat gcgtccgata
     3241 tgtgccgcca cgtcattccg ccttcagaaa ggtcaggcgg cggacaatct gttcggcggc
     3301 atcctgccgc atttccgccc acaatgccgc ttcctcttcc tgtttgccca agatctcgtt
     3361 gtcggcataa gcaaggacgc ggcggacgga cacggtcatc ggtttgccga ccggctcgcc
     3421 gcgtttcaat acctgcgctt caaccgtcaa tatcaaaaga tattcgttga tgactgccgc
     3481 acgggtaacg gtgtaggttt ccttgttttg ggaaacgctg tctatacgca gggtcatctg
     3541 cgcgccggca gcatcgtcca ccctgcccga agcctgatac agcgcggttt ccaaaggaaa
     3601 ctgcaatgcc tgtccgcctt cgatgtgcca gctccggtag gtcagcggcg gagaaatgcc
     3661 gtctgcacct ttcaggtgga aaccgcacgc gcccagcatc agcactgcgg cagtaagaaa
     3721 cagtttgttc atggcttgcc tttctcaaaa gcacaaagtc ggtagattat atcagcggcg
     3781 tgttcagacg gcattgccgt ccagccaaat caggctcgcc atacgccctg tcgctccgtc
     3841 gcggcggtag gaaaagaaag tatcccgttc caaaaccgta caatgcgtgc cgccgtacac
     3901 gccgcccacg ccttcgcgct tcagaatcag gcgggcgagc gcgtaaaggt cggcaaggaa
     3961 tttgccgccg cctatgcctt caaatgcggc ggcggcttcg ggcatgggcg tgcagaacgc
     4021 atcaaacacg tcctgtccga cttcaaacgc atccgcactg atggcggggc cgagatacgc
     4081 catcatttcg acaggcggaa ccttcatcgc tgcaatggtg ttttgcaata cgccgcccgc
     4141 caaaccgcgc cagcccgcgt gtgcggcggc aaccgtcgta cccgccctgt cgcaaaacaa
     4201 aacaggcagg cagtctgcgg tcatcacggc acaggcaacc ttgcccgtgt cgtccacgga
     4261 agcgtccgca tcgggcgtgc cgtccaatgc ttcggcagca ttgacgacaa tggtgctgtg
     4321 gatttgattg aggtaggcaa cgggcaatcc gacctgctgt tgcacgattt cgcggttgcg
     4381 gcgcacggct tcgggattgt cgccgacgtg cgtaccgagg ttcaaactct gatacgcacc
     4441 ttggctcacg ccgccgttgc gcgtggtaat cagggttttc acattggcgg gcgcgggcca
     4501 atcggcggtc aggaagtttt tgcctttcgg ggcaagattt agggtttctg tgatggtttt
     4561 cattggatat tggaataggt gtgtggcgga aagggttgat taactgcctt cggggcaaat
     4621 ggatgtttgt tttttcgtca ttcccgcaca ggcgggaatt cggagattcg ggattgtttt
     4681 caaacgttcg ggttcggatt tttgcaggtg cgggaatgat gcccttatat accttctccg
     4741 agctttatat agtggattaa caaaaaccag tacggcattg tctcgcctta gctcaaagag
     4801 aacgattctc taaggtgctg aagcaccaag tgaatcggtt ccgtactatt tgtactgtct
     4861 acggcttcgt cgccttgtcc tgatttttgt taatccacta tatgtttcaa caggggatgg
     4921 cacatcaagc accgcactgc gtgttgcccg aacgagacta ccctccgatt agattctatc
     4981 gctataaaca gacgggtttc aaccgaaaag gaatggggat aaagtccatt tctgacacct
     5041 ctcgggcgat gccgtctgaa aaccaatctc cactttcaga cggcattgtt taggcacggt
     5101 cattttgcaa attaaggtta aggcgtgtat gcttgccttc ccttaaaaac aaacacgcaa
     5161 cgcattatta tgaatatcct cagtaaaatc agcagcttta tcggaaaaac attttccctc
     5221 tgggccgcgc tctttgccgc cgccgctttt ttcgcgcccg acaccttcaa atgggcgggg
     5281 ccttatattc cttggctgtt gggcattatt atgttcggta tgggtttgac gctcaaacct
     5341 tccgacttcg atattttgtt caaacatccc aaagccgtca tcatcggcgt aatcgcacaa
     5401 ttcgccatta tgccggcaac cgcctggctg ctgtccaaac tgttgaacct gcctgccgaa
     5461 atcgcggtcg gcgtgatttt ggtcggctgc tgcccgggcg gtacggcttc caatgtgatg
     5521 acctatctgg cgcgtggcaa tgtggctttg tcggttgccg ttacgtctgt ttccaccctg
     5581 atttccccat tgctgactcc cgccatcttc ctgatgcttg ccggtgaaat gctggaaatc
     5641 caagcggccg gtatgttgat gtccatcgtc aaaatggttt tgctccccat tgttttgggt
     5701 ttgattgtcc ataaggtttt gggcagtaaa accgaaaagc tgaccgatgc gctaccgctg
     5761 gtttccgttg ccgccatcgt gctgattatc ggcgcggttg tcggggcaag caaaggcaag
     5821 attatggaaa gcggcctgct gatttttgcc gttgtcgcac tccacaacgg catcggctac
     5881 ctgctcggct tctttgccgc caaatggacc ggcctgcctt atgatgcaca aaaaacgctg
     5941 gccatcgaag tcggtatgca aaactcgggg ctggccgccg cgcttgccgc cgcacacttt
     6001 gccgctgcgc cggtcgttgc cgttccgggc gcattgttca gcgtgtggca caatatctcc
     6061 ggctcgctgc tggcaactta ttgggcggcc aaagccggta aacataaaaa accctaaacg
     6121 cctttcatca taatgccgtc tgaacggggc aaacgaaacc ggcggtttct gcccgacccc
     6181 ttcagacgcc tttgtttgaa atcggcgggg acgattatcc ggctgctccg attcggctac
     6241 ctgcgttcgc cccgcctttc aagccacctc actccctcac ataaaccact tcgacatcgt
     6301 agtcgtcttc gttccaatcg tcatcgtcgt ccgcgccgaa tttgtcctgc cattcctctt
     6361 cattgctcaa agacgaatcc aaaccggctt caagacggag gacggacaac aaatgatata
     6421 tgtcgtccgg aatcggtgcc tcaaacgaaa cggtttcgcc gctttccgga tgggtgaaac
     6481 tcaagcggta ggcgtgcaat gcctgacgcg cgcccaaact tttaacggct tctttcaccg
     6541 ggtcgctgca cggatggcgc gggttgccgt acacgggatc gccggcaagc ggatggttgg
     6601 cctcgcgcat atggacgcgg atttggtgcg tcctgcccgt ttcgagcgag cattcgatat
     6661 agctgtgggt aagatagcgt tccaacactt tgacgtgggt aacggctggt ttgccgccga
     6721 atttgacgac tgccattttc aggcggttgt gcggatcgcg tccgatttgg gtttcgattt
     6781 taccgtcgaa ggggacgatg ccgttggcga cggcgcggta gatgcgtttg accgtgcgct
     6841 cttgaagctg cctcacgagg gaattttgcg ccggcagggt tttggcaacc accatcagcc
     6901 cgctggtttc tttgtccaaa cggtgtacga tgcctgcacg cggtacttgg ctcaattcgg
     6961 gacagtgcgc caacaggccg ttgagcagcg tccccctcca gttgcctgcc gccggatgca
     7021 ccaccagtcc ggccggtttg ttgacgacaa tgacggtatc gtcttcgtaa acaatatcca
     7081 aagccatagg ctctggaaca aacgccagat tttcctcact cggacggacg gttacacgga
     7141 tttgctcacc gcctatcatt ttgtctttgg gttgcgaagg tttatcgttt acaataaccg
     7201 cgccctcttt aatccataat gtcaggcggc tgcgcgaata gtcgggcaga agtttcgcca
     7261 acaccgcatc caaccgcccg ccggcaagct cgagcggaac ggtcagaccg atacggtttt
     7321 cagtttcgga agctgacgca aagtctgaat cgtcgctata atcggattca ttatcaaagg
     7381 aagtattctg catgaaaaaa attcttttaa cggtttcatt aggtttggca ctgagtgcct
     7441 gtgccactca aggtacggtc gataaagatg cccagattac ccaagattgg agtgtggaga
     7501 agctctatgc cgaagcccag gacgaattga acagcagcaa ttatacgcgg gctgtcaagt
     7561 tatacgaaat cttggaatcg cgcttcccca ccagccgcca tgcccggcag tcgcaactgg
     7621 ataccgcata cgcctattat aaagacgatg aaaaagacaa agctctggcg gcaatcgaac
     7681 gcttccgccg ccttcacccg caacacccga atatggatta cgcgctatac ctgcgcggtt
     7741 tggtactgtt caacgaagat cagtctttct tgaacaagct ggcctcgcaa gactggtccg
     7801 accgcgaccc gaaagccaac cgcgaagcgt accaggcgtt tgcggaactc gtccaacgct
     7861 tccccaacag caaatacgcc gccgatgcga ccgcacgtat ggtcaaactg gtcgatgcac
     7921 tgggcggcaa tgaaatgtcg gtggcgcgct actacatgaa acgcggtgca tatatcgccg
     7981 ccgccaaccg cgcccaaaaa atcatcggca gctaccagaa tacgcgttat gtcgaagaat
     8041 cgctcgccat attggaactt gcctaccaaa aactcggcaa accacagctt gccgccgata
     8101 cgcgccgcgt gttggaaacc aacttcccga aaagcccgtt tttgacgcac gcttggcagc
     8161 ccgacgatat gccctggtgg cgttactggc attaagccca tcttcgtaat gccgtctgaa
     8221 gccgtttcag acggcatttt atgtttcaaa cctcattcaa acggtttttt ctgccaatag
     8281 aatttatacc ctctcaaacg ttgagccttc acgccgccgc gccccaagcc gaattgcagc
     8341 gcgcccgaca aatcggtacg caacaatttg atgccgtgtg cacggatacg gttttgcacc
     8401 gcttcggtcg gatgtttgta ggcgttggca taaccgcttg aagcaacggc atattcgggc
     8461 gagacggcat tgaggaacac gcccgacgag gacgtattgc tgccgtgatg tcccaaaacc
     8521 aaaacctggc tgtacaggtt gcctccatac ttgccgacca ggctttcctc gcccttcgta
     8581 tccaaatcgc ccgttaccag cagtgccgca ccgcccgcca caacacgcaa aacacaactt
     8641 ttcccattat catcgatgtt tttgcgttca gacggcatca aaaactcaaa atccacgccg
     8701 tcccattgcc aacgctgttc cgcacaatgc cgcgccccct cataaaattc cggctgcccg
     8761 gcataaatcc cgccgttcgg tatcttgccg actgcctgaa aaccgccgtc gtggtcgctg
     8821 tcgtgatgcg acagaaccag cttgtccaaa cggcggacac ccgccgcatt caaactcggc
     8881 acaatcccca tctgcgccgc cgctgccgtt ccggtgtcaa acaaaagatg atgatttgcc
     8941 gtctgaaccg acaccgacaa accctgcccc gcatcccaaa ccgtaaccgc aacctcattt
     9001 tccggcacgc cgggtgaacg gtaaaacaca aaccctgcca acagcaacac cgcccacgga
     9061 cgcaaaccca agccgcgcgg cagcagcaac agcaaagcgg cacacaccgc caacaccaac
     9121 agcggcaaag gtgcggcggc aacggcaaac tcgggcgaca catcggcaag ccacaccaaa
     9181 aaccgcaaag tatattccgc caaaaatgcc cccaactgtt gcaaaggcgc aaacggcacg
     9241 accgaaccca gcaacgccag cggcgtcaat acccaagaaa accacggaat cgccaccgca
     9301 ttgaccaaag ggctgattaa aggcagcgaa gcaaacagat aaccgagcaa aaccagcgac
     9361 aacaccgaag ccgcccactg cccgcgcacg gcggtttgcc gtttcccttc gtgcaaacgc
     9421 cccgaacacg cccatatcag ggccgccacc aaaccgaaag acagccaagt ccccacaccc
     9481 aagaccgccg acgggtcgaa cagcagcacc gccgccaacg cctgccacca cgtcgcccac
     9541 gccgacaatc ttcccctgcg ccaagcccac gcaaacgccg ccaacatcaa aacgctgcgc
     9601 tgcgtcggca cggaaaaacc ggcaagcagc gcgtaaaaca gcgcgcctgc acaccccgcc
     9661 gccaaaaccc acgcgcgcgg ccgggcagga aggcgcgggg aacaggcaag cagccgcttc
     9721 gccagccacg caaacattac cgccaccatc gtaacgtgca aacccgaaat actgaccaaa
     9781 tgcgtcagcc ccaacggccg gaacgcctgc cacaattcgg ggcgcaatgc cgactgttcg
     9841 cccacgctca acgcgcgcat cagcccgatg ccgtctgaaa gcccgccgtc cgcatccgcc
     9901 tgctgccaat tacggctgat gcggctgcgc caaaccgcaa tcccccaacc gcttccgcca
     9961 tgcagcaaaa ccctgtccgc accgaccgtc cccgcgccgc ctatcccgtt ggataatgcc
    10021 cacgcctcac ggttcaaacc gcgcaggttc aattcgccga cgacggggtg cacacgtgcc
    10081 gttatccgcc atctgctccc gaccgcccat tcgcgccgtt tgtagtccga cagcagcaaa
    10141 tcaaacgtcc gaccaccgct gtccacagcc tttgccgcaa actgcacgcg ccgcccgtcc
    10201 gacctcggca tatccgccac ttccaccgtc aacggcacac ctgaaaccgc ctccgcccgc
    10261 cattgcgaag acagtgccgc ttccgttctg aatacgccgt aagccgcgcc cgccaacacg
    10321 cacagcatca gaccggcaaa cgcaaaacgc cttgcaaaca cagcaaaaac cgcaaaagcc
    10381 gccagccaaa acagccaatg cggcacgacc ggcagcgcaa acgaagccgc cgcgccgaca
    10441 acccaacacg gcaaaaacca acgacggaac acgtctcccc accccagata tttcaaaaat
    10501 aaacggataa taaagcaaat ccgaaaaacc gtcataacaa gatttgaaaa tgatatagtg
    10561 gtttaaattt aaatcaggac aaggcgacga agccgcagac agtacaagca gtacgacaag
    10621 gcgaggcaac gctgtactgg tttttgttaa accactataa gaatgcaaac gaaaagcctc
    10681 agtattatcc gagacaacgg caaactttcc atcgtcattc ccgcacaagc gggaatccaa
    10741 acttgtccgc acggaaactt atcggataaa acggtttctt agattccac
//
LOCUS       DAWGKF010000060        10525 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.060, whole genome shotgun sequence.
ACCESSION   DAWGKF010000060 DAWGKF010000000
VERSION     DAWGKF010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10525)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10525)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10525
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.060"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            54..1064
                     /gene="waaF"
                     /locus_tag="WHR07_001077"
     CDS             54..1064
                     /gene="waaF"
                     /locus_tag="WHR07_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HEZ2130295.1"
                     /translation="MSIKILIISPSWIGDCVMTQPLFRRLKELHPGCTIDVFAPKWSM
                     AVFERMPEVNEILENPFGHGALELKRRWRVGRDLGRRGYDQVIVLPGSLKSAIIALAT
                     GIGKRTGYVGESRYFLLNDIRRLDKERLPLMVDRYTALAHPSQEDFDGHSGFPEFSID
                     ERRREISVETFGLNLGKPVLAFCPGAEFGPAKRWPTRHFAELGKHYLAAGWQVWLFGS
                     QKDDEIAEEINRLSDGMCVNLCGKTDLSQAMDLLSLADTVVCNDSGLMHLAAALGRKV
                     VAVYGSSSPTHTPPLSDRAKIVSLHLECSPCFKRECPLGHTDCLNRLYPEKIVQAVEE
                     AV"
     gene            1119..1565
                     /gene="smpB"
                     /locus_tag="WHR07_001078"
     CDS             1119..1565
                     /gene="smpB"
                     /locus_tag="WHR07_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEZ2130296.1"
                     /translation="MAIANNKKAFHDFFIEDRIEAGLVLEGWEVKAIRAARVQLKESY
                     IYWKKDAFYLVGCHITALPTASTHIKPDAVRPRKLLLNQSEINKLIGKTERAGYTIVP
                     LDLHFSRGKIKMEIGLAKGKKQHDKRQSMKEADWKREKQRLIKHTR"
     gene            1931..3973
                     /locus_tag="WHR07_001079"
     CDS             1931..3973
                     /locus_tag="WHR07_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_180374913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HEZ2130297.1"
                     /translation="MYYETRSKQASKQKFKKSFIISLFFSILYTSPLLAVDYVYDNSK
                     LTNEQIDRLKKLRDKSSEYWKQETYLLKPTNGSSQNSLKVPALYSKTHQFENINNSKK
                     ISFYDKEYTEDYLVGFARGFGVEKRNGEEEKTLQQYFKDCVNTGNSNNDQCKQPSLGS
                     YVPILIKSDIFSLGPQIKNSHINSEILSVGNYIEWLRPTLNKLTGWQEQLYSGLDPFH
                     YIDVTDNSHVIGQTISLDQFRLENSLWEPRWDSDVGELKTTNADIRFNTKSESLLVKE
                     DYAGGARFRFAYGLKDKVPETPVLTFEKNITGTSDIIFENPIDDLKSLDGHQIIKVNG
                     TADKHAFRLSGKHQKGIYTLSLQQRPEGFFTKVQERDDIAIYAQQAQAANTLFALRLN
                     DKNSDIFDRTLPRKGLWLRVIDGHSNQWVQGKTAPVEGYRKGVQLGGEVFTWQNESNQ
                     LSIGLMGGQAEQRSTFRNPDTDNLTTGNVKGFGAGVYATWHQLQDKQTGAYIDSWVQY
                     QRFRHRINTEDATERFTSKGITASIEAGYNALLAEHFTKKGNRVRFYLQPQAQLTYLG
                     VNGKFSDSENAHVNLLGSRQLQSRVGVQAKAQFSLYKNIAIEPFAAVNALYHNKPFGV
                     EMDGERRVINNKTAIESQLGVAVKIKSHLTLQATFNRQTGKHHQTKQGALNLQWTF"
     gene            complement(4154..5521)
                     /locus_tag="WHR07_001080"
     CDS             complement(4154..5521)
                     /locus_tag="WHR07_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEZ2130298.1"
                     /translation="MPDLHTEFSRLLPADEIAELSPTLLKDQRNRFTSAPDIILQPRS
                     VESVQTIMRFCYEHRIPVTPQGGNTGLCGAAVSENGVLLNLSKLNRIRSINLSDNCIT
                     VEAGSVLQTVQQAAEASNRLFPLSLASEGSCQIGGNIACNAGGLNVLRYGTMRDLVIG
                     LEVVLPNGELVSHLHPLHKNTTGYDLRHLFIGSEGTLGIITAATLKLFARPSDKATAW
                     VGIPDIESAVRLLTETQAHFAERLCSFELIGRFAAELSSEFSKFPLPTHSEWHILLEL
                     TDSLPDSNLDDRLVEFLYKKGFTDSVLAQSEQERIHMWALRENISASQRKLGTSIKHD
                     IAIPIGRVADFVRRCAKDLEQNFKGIQIVCFGHLGDGSLHYNTFLPEILSNEVYRYEN
                     DINDAVYRNVLACNGTIAAEHGIGIIKKQWLDKVRTPAEIALMKSIKQHLDPYNIMNP
                     GKLLP"
     gene            complement(5631..5912)
                     /locus_tag="WHR07_001081"
     CDS             complement(5631..5912)
                     /locus_tag="WHR07_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130299.1"
                     /translation="MKKSLFAAALLSLVLAACGGEKAAEAPATEAPAAEAPAAEAAAT
                     EAPAAEAPTAEAAATEAPAAEAPAAEAAATEAPAAEAPAAEAPAAEAAK"
     gene            6385..6867
                     /locus_tag="WHR07_001082"
     CDS             6385..6867
                     /locus_tag="WHR07_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEZ2130300.1"
                     /translation="MAIVKNSVVSLHYEMYDANNQLLDKTEEPIAYLHGGYDGIFPLV
                     EEALHGKDAGDTVDVALSPDDAFGEQDPELVRIEDAGVFPVEVEVGMMFEADDPETGD
                     VVVYRVTDVADGKAVVDGNHPLAGMKIRFKATVESVRDASDEEIAHGHVHGPHGHHHH
                     "
     gene            6954..7766
                     /gene="hpnC"
                     /locus_tag="WHR07_001083"
     CDS             6954..7766
                     /gene="hpnC"
                     /locus_tag="WHR07_001083"
                     /EC_number="2.5.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="squalene synthase HpnC"
                     /protein_id="HEZ2130301.1"
                     /translation="MSVGHYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMP
                     SEARLAGLEGLQRELDVLASGGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDV
                     VKTRYAHFGELADYCRRSANPVGRIMLALYGKTDAVCVAQSDGICTALQLVNFWQDVA
                     VDWQKGRVYIPQDDLLKFGVSEGQIAEGRADAAFQRLMAYECRRAFRMLKAGSPLARE
                     LKGRIGLELRMIVLGAQLILQKLDACRYDVFAQRPVLDKKDWLIMLKRALWK"
     gene            complement(7837..8307)
                     /locus_tag="WHR07_001084"
     CDS             complement(7837..8307)
                     /locus_tag="WHR07_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1841 family protein"
                     /protein_id="HEZ2130302.1"
                     /translation="MYDVNTHDVRRFFARVWQQRLNPLQLSALEQKALRIIEAHPEYH
                     RYLERIEDHLDTDWLPENGESNPFLHMSLHLSVQEQAGIDQPHGIRAIHDTLCAKRGW
                     LEAEHEMMEALAETLWTAQRYGTGLDVNFYMTRLRKLIGLGAEDQARLNPHKIA"
     gene            8398..10239
                     /locus_tag="WHR07_001085"
     CDS             8398..10239
                     /locus_tag="WHR07_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HEZ2130303.1"
                     /translation="MQTNYLSETDSIMKKLICLFAVFLMLCGRAFALDANDLLPPEKA
                     FVPELAVADDGVNVRFRIADGYYMYQAKIVGKTNPADLLGQPSFSKGEEKEDEFFGRQ
                     TVYHHEAQVAFPYAKAVGEPYKLVLTYQGCAEVGVCYPPVDTEFDISGNGTYHPQTDE
                     PASAKDRFLQPSSQNGSGALPPPKGDEGGDSRFKLSWDTLNANLLAFFLAGLGLSFTA
                     CMYPLLPIVSSIVVGDKKAGKARAFVLSVVYVQGLALTYTLVGIVAGLTGALLTVWLQ
                     QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLSGGKIVSVFIMGILSA
                     LIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPLIAIGTFGGHILPKAGD
                     WMNAVKYAFGFILLAVAVYLATPHLPYYLVVALYTLLMLVPACMLLVNGRRQKRRPKA
                     VAFALGGILLIGGAWFGWQGANGKTTALHHFLTLNPPAEAGKSSEHGKMFADTAALKA
                     AMDTALKEHPDKPVVLDFYADWCISCKEMAAYTLNQPEVHQAVDMERFFQIDVTANKP
                     EHQALLKEYGLFGPPGVFVVRSDGSRSEPLLGFVKADKFIEWYEQNR"
BASE COUNT         2636 a         2274 c         2866 g         2749 t
ORIGIN      
        1 ttttccaacg gtttcgcggt aaaattctgc ctgtctgatt tcggtttctt gttatgtcca
       61 tcaaaatcct gattatttct cccagttgga taggcgactg cgtgatgacc cagcccttgt
      121 tccgccgttt gaaggaactt caccccggtt gcacgattga tgtgttcgca ccgaagtggt
      181 cgatggcggt gtttgagcgt atgccggaag tgaatgagat tcttgaaaat ccgttcggac
      241 acggtgcgtt ggagttgaaa cgccgctggc gggtcggtag ggatttgggg cggcgcggat
      301 acgatcaggt tatcgtgttg cccggttctt tgaaatcggc aatcatcgcg ctggcgacag
      361 gtatcggtaa aaggacgggt tatgtcggtg aaagccgtta ttttctgttg aacgatatac
      421 gcaggctgga taaggaacgt ctgcctttga tggtggacag atatacggct ctcgcgcatc
      481 cgagccagga ggattttgac gggcattcgg gattccccga gttttccatt gatgaacggc
      541 ggcgggaaat ttctgtcgaa actttcggtt tgaatcttgg aaagcctgtt ctggcttttt
      601 gtccgggtgc ggaattcggg ccggcaaagc gttggccgac aaggcatttt gccgagttgg
      661 gcaaacatta tctggcggcg ggttggcagg tttggttgtt cggttcgcaa aaagatgatg
      721 aaattgccga ggaaatcaac cgcctttcag acggtatgtg tgtcaatttg tgcggcaaaa
      781 ccgatttgtc gcaggcaatg gatttgctgt cgttggcgga cacggtcgtg tgcaacgaca
      841 gcgggctgat gcacttggcg gcggcattgg gcaggaaagt ggtggcggtt tacggttctt
      901 ccagcccgac gcatacgccg cctttgagcg acagggcgaa aatcgtcagc ctacacttgg
      961 aatgttcgcc ctgtttcaaa cgtgaatgtc cgttggggca taccgactgc ctcaacaggc
     1021 tgtatcccga gaagattgtg caggcggttg aagaggcggt atgatgggtt ctgttttcgg
     1081 gtttatgccg tctgacggcg gatattgata ggatgtttat ggctattgcg aacaataaaa
     1141 aagcatttca cgattttttc attgaagacc ggattgaagc cggtttggtc ttggaaggct
     1201 gggaagtcaa agcaatccgc gccgcgcgcg tacagcttaa agagagttat atctattgga
     1261 aaaaagacgc gttttatctg gtcggctgcc atattacggc tttgcccaca gcctcgacac
     1321 acattaaacc agatgccgta cgtccgcgca agctcttgtt gaaccagtcg gaaatcaaca
     1381 aattaatcgg caaaaccgaa cgtgccggct acaccattgt gccgctggat ttgcattttt
     1441 cgcgcggaaa aatcaagatg gaaatcggtt tggcaaaagg taagaaacag cacgacaaac
     1501 gtcagagtat gaaagaggcg gattggaaac gcgagaaaca gcggttgatt aagcatacgc
     1561 gctgattgtg gaaacagtgc ttcagacggt atgggcaagg ctgccgcctg atgtgtaaac
     1621 gttctacacc taaaccagca tccgctttaa tcagcacggc atgatgcccc aaaccttcgt
     1681 caaaggtttg agcaatttga tgataaattg gcattagcca agggtaaagt gcggtcattt
     1741 ttcctgaaat ttttgtaaat aacgagggca attatacaca ttttcaaact ggcttgacaa
     1801 aatagcaaaa agcaaacgtt tacttttaat aaataagaaa taaatagaga aaaatgtgag
     1861 ctaaatgaca ttttttgttc aattctatgc taaaatccac gccccattta tctttacttg
     1921 acaaaggaaa atttattatg aaactcgaag caagcaagca agcaagcaga agtttaaaaa
     1981 atcatttatt ataagtctat ttttttctat tctttatacc tctcctcttt tggctgttga
     2041 ttacgtttac gacaattcta aattaacaaa tgagcaaatt gatcgcttaa aaaaacttag
     2101 agataaaagc agcgaatact ggaaacaaga aacttatctt ctaaaaccga cgaatggtag
     2161 ctctcagaac tctctcaaag ttcccgcact atactctaaa acacaccaat tcgaaaacat
     2221 caacaactca aaaaagattt ctttttatga caaggaatac actgaagatt accttgttgg
     2281 cttcgcccga ggtttcgggg ttgaaaaaag aaatggggaa gaagaaaaaa cactccagca
     2341 atattttaag gactgtgtaa atactgggaa ttccaataat gatcagtgta aacaaccatc
     2401 cttaggaagc tatgtcccga tactcataaa gagcgatatt ttctccttag gtccacaaat
     2461 aaaaaatagc catatcaaca gcgaaatttt atctgtaggt aattatatcg aatggcttcg
     2521 cccaacactt aataagctta ctggttggca agaacaacta tattctggtt tagatccatt
     2581 ccactatatt gatgttacag acaactcgca cgttatcgga caaacaatta gtttggatca
     2641 attcagatta gaaaattctc tctgggaacc ccgttgggat tctgatgttg gggaattaaa
     2701 aacaacgaat gcagacatcc gttttaatac taaaagtgaa agtttactcg taaaagaaga
     2761 ttatgctggc ggagctcgtt ttcgttttgc ttacggtcta aaagataaag tccctgaaac
     2821 accagtttta acttttgaaa aaaatataac tggcacttcc gacatcatct tcgaaaatcc
     2881 aatagacgat ttaaaaagcc tcgacgggca tcaaattatc aaagtaaatg gcacagcaga
     2941 taaacacgca ttccgtcttt ctggcaaaca ccaaaaggga atttatacgc tttctttaca
     3001 acaacgccca gagggctttt ttaccaaagt gcaagaacgc gatgatattg cgatttatgc
     3061 acaacaggct caagccgcca ataccttatt cgccttgcgt ttgaacgaca aaaacagcga
     3121 tatttttgac cgcactttac cacgcaaagg cttgtggttg cgtgtgattg acggacattc
     3181 caaccaatgg gtgcaaggca aaacagcacc tgtagaaggc tatcgtaaag gtgtgcaact
     3241 cggtggcgag gtgttcacat ggcaaaacga aagtaatcaa ctttctattg gcttaatggg
     3301 cggacaagca gaacaacgca gcactttccg taacccagat acagacaatc ttacaacggg
     3361 aaatgtgaaa ggctttggtg caggcgttta cgccacttgg catcagcttc aagataaaca
     3421 aacaggggca tatattgaca gctgggtaca atatcaacgt ttccgccacc gtattaacac
     3481 tgaagatgct acagaacgtt ttacttcaaa aggtattact gcctcaattg aagcaggtta
     3541 caatgcttta ttggcggaac acttcactaa aaagggcaac cgtgttcgtt tttacctgca
     3601 accacaggca caattgactt atttgggggt aaacggaaaa ttcagcgata gcgaaaatgc
     3661 ccacgtgaat ttacttggct ctcgccaatt acaaagccga gtgggcgttc aagctaaagc
     3721 tcaattttca ctctataaaa atatcgctat tgaacctttc gccgctgtga acgcgcttta
     3781 ccacaacaaa cctttcggtg tggaaatgga cggagagcgt cgagtgataa acaataagac
     3841 ggcaattgag agccaattag gtgtagcagt gaaaatcaaa tctcacttaa ccttacaagc
     3901 cacattcaac cgccaaacag gcaaacatca tcaaactaaa caaggtgcgt tgaatttgca
     3961 gtggacgttt taagttaagt tgtaacaaaa taaaatcggc agggaaattc actgccgatt
     4021 tttttatttt aaaaatgcgg tcatttttcg tgtcatttcc accaattttt taccgcactc
     4081 acgagctcgc gctaaaccga caatcggatc tattgtccct ttctttgttg tgtatgcaaa
     4141 tcagaaatgc cggttacgga agcagtttgc ccggattcat aatgttatat ggatcaaggt
     4201 gttgtttgat gcttttcatc agggcgattt cggcaggcgt gcgtactttg tccagccact
     4261 gttttttgat gatacctatg ccgtgttcgg cggcaatcgt gccgttgcag gcaagaacgt
     4321 tgcgataaac tgcgtcgttg atgtcgtttt cgtaacgata gacttcattg ctgaggattt
     4381 cgggcaggaa agtattgtag tgcaggctgc cgtcgccaag atgtccgaag cagacgattt
     4441 gtatgccttt aaaattctgt tccaaatctt tggcgcaccg gcggacaaag tcggcaacgc
     4501 gtccgatagg aatggcaata tcgtgtttga tgctggtgcc cagtttgcgt tgcgatgcgg
     4561 agatgttttc gcgcaatgcc cacatatgga tacgttcttg ttcgctttgt gccaatacgc
     4621 tgtcggtaaa tcctttttta taaagaaatt cgacaagccg atcatcaaga ttgctgtcgg
     4681 gtaatgagtc ggtcaactca agtaaaatat gccattctga atgtgtcggc agggggaatt
     4741 tgctgaattc ggaagacaac tcggcggcaa aacggccgat cagctcaaaa ctgcataggc
     4801 gttcggcaaa gtgagcttgg gtttcggtca gcaggcggac ggcggattcg atgtcgggta
     4861 tgccgaccca tgccgttgcc ttgtccgagg gacgggcaaa aagcttgagc gtggcggcag
     4921 tgatgatgcc cagtgtgcct tcgctgccga taaacagatg gcgcaggtcg tagccggtgg
     4981 tgtttttatg caggggatgg agatgggaaa ccagctcgcc gttggggagg acgacttcca
     5041 aaccgataac caggtcgcgc atcgtgccgt aacgcaatac gttcaaacct ccggcattgc
     5101 aggcgatgtt gccgccgatt tgacaggagc cttcgctggc gagactgagt gggaacagcc
     5161 tgtttgaggc ttcggctgcc tgttggacgg tttggagtac ggaacctgct tcgacggtta
     5221 tgcagttgtc tgacaaattg atgctgcgga tgcggttgag tttggaaagg ttcagcaata
     5281 cgccgttttc cgatactgcc gcgccgcaca aaccggtatt gccgccttgc ggcgtaaccg
     5341 gaatacggtg ttcgtaacaa aaacgcataa tggtttgcac gctttcaacg ctgcgcggct
     5401 gcaaaatgat gtctggtgca gacgtaaagc ggttgcgctg gtcttttaaa agcgtcggag
     5461 aaagttcggc aatttcatct gccggcagga gtcgggaaaa ttcggtatga aggtcaggca
     5521 tgtttgtcgg aagggtaggg agaagattga ggaagggaat ctgatgccgt ctgaaaaatc
     5581 aaaaaagcag gatactgaac gtatcctgct tttttgcaag cggaaaatgc ttattttgca
     5641 gcttcggcag caggagcttc ggcagcagga gcttcagcgg caggtgcttc ggtagcggca
     5701 gcttcagcag cgggagcttc ggcggcaggt gcttcagtag cggcagcttc agcagtggga
     5761 gcttcggcgg caggtgcttc agtagcggca gcttcagcag cgggagcttc ggcggcaggt
     5821 gcttcggtag cgggagcttc agcggctttt tcaccgccgc aggctgccag gaccaaagac
     5881 aacaaagcag cggcaaacag ggattttttc attttagtaa cctttagaac caatttaaat
     5941 tattgaaaca aataggtctt tatcgaccat actacaaacc gggttggaaa ttcatcgctg
     6001 aatttgcgta attatgcact atggaataag ggattgcaat gtcgtacaga tgggaaaaag
     6061 gtttgaatga aaagttttct ggcgggcgga ttgataaatc ctgtaaaacg gttttgctgt
     6121 taaaaattcg atagggataa atattataga gattaatata atttcagtat cttgtatgat
     6181 ttattaaggc ggattgggaa agtcggcaga caggtcggaa tggttttaag aatgttgtaa
     6241 aaaagttaca ccgcaataaa ataacaaaaa tttacattga aatatgtgct gtacagttta
     6301 tgaacaggtt aacggtaatc ggccggcgcg gcggttgtgt tagaatgcgc ctgtaatcaa
     6361 tctgctgttc ctgaaaggac aaatatggct atcgtgaaaa attccgtggt ttcgctgcat
     6421 tatgagatgt atgatgccaa caatcagctt ttggacaaaa ccgaagaacc gattgcgtat
     6481 ctgcacggcg gttacgacgg cattttccct ttggtggaag aggcgttgca cggtaaggat
     6541 gccggcgata cggtcgatgt ggcgctgtcg cccgacgatg cgttcggcga gcaggatccg
     6601 gagttggtcc gtattgaaga tgcgggcgtg ttccctgttg aagtcgaagt cggcatgatg
     6661 tttgaagccg acgatcctga aaccggcgat gttgtcgtct atcgtgtaac cgatgttgcc
     6721 gacggcaagg cggtggtgga cggcaaccat cctttggcag gcatgaaaat ccgctttaag
     6781 gctacggttg aaagcgtgcg cgatgcatcc gatgaggaaa tcgcacacgg tcatgtccac
     6841 ggcccgcacg gtcatcacca ccactgattg ccggcagctt ggaggtatct gatgccgtct
     6901 gaaaagggtt tgttccgttt cagacggcat tttgtttgat ggatggagaa ggtatgtcgg
     6961 ttgggcatta tgagaatttt cccgtcggtt cgctgatttt gccgcgcagg ttgaggaagc
     7021 cggttcacgc ggtgtacgcg tttgcacgga cggcggacga tatggcggac gagggcagta
     7081 tgccgtctga agccaggttg gcggggttgg agggtttgca gcgcgagttg gacgtgttgg
     7141 catcgggcgg ccggtcggcg catcctttga ttgcacgatt ggatgccgag gcggttgtgc
     7201 cgttcggttt ggatttgcag ccgttttatg atttgctttc tgcattttct caggatgtgg
     7261 ttaaaacgcg gtacgcgcat ttcggcgagc tggccgatta ttgtcggcgt tccgccaacc
     7321 ctgtcggacg cattatgctg gctttgtacg ggaaaacgga tgcggtgtgc gtggcgcaaa
     7381 gcgacggtat ctgtacggct ttgcaactgg tgaatttttg gcaggatgtg gctgtggatt
     7441 ggcaaaaggg cagggtttat atcccgcagg acgatttgtt gaaattcggt gtttccgaag
     7501 gacagattgc ggagggtagg gcggatgcgg cgtttcagcg gctgatggcg tatgagtgcc
     7561 ggcgcgcatt ccgtatgctg aaggcgggtt cgcctttggc gcgcgaattg aaagggcgta
     7621 tcggtttgga actccgtatg attgtgttgg gggcgcagtt gattttgcag aaactggacg
     7681 cgtgccgata cgatgtgttt gcacaacgtc cggttttgga taagaaggat tggttgatta
     7741 tgttgaaacg cgcgttgtgg aaatgatggg ggaaatgaat gccgtctgaa aggggttgtt
     7801 ccgcttcaga cggcattttg caggcggttg gtatggtcag gcgattttat gcgggttcaa
     7861 cctggcttga tcttctgcac ccaagccgat gagtttgcgc agtcgggtca tgtagaaatt
     7921 gacatccaaa ccggtgccgt agcgttgcgc cgtccacagt gtttccgcca gtgcctccat
     7981 catttcgtgt tcggcttcca gccagccgcg tttggcgcac agggtgtcgt ggattgcgcg
     8041 tatgccgtgc ggctggtcta tgcccgcctg ttcttggacg gacaaatgca gcgacatatg
     8101 caggaagggg ttgctttcgc cgttttcggg cagccagtcg gtgtccagat ggtcttcgat
     8161 gcgttcgaga taacggtggt attcgggatg ggcttcgata atgcggaggg ctttctgttc
     8221 cagtgcgctc agttgcagcg gattgagccg ctgctgccac acgcgggcga aaaagcggcg
     8281 gacatcgtgg gtattgacat cgtacatggc gggttcggta agatgtttat ggaaataggt
     8341 tcggataatg gcgggtttta cataaattaa atcccaccgt caaccttacc atttataatg
     8401 cagacaaatt atttgtctga aacggattcg attatgaaaa aactgatttg cctgttcgcc
     8461 gtatttttga tgttgtgcgg acgagctttc gcgctggatg cgaacgatct gctgccgccg
     8521 gaaaaggcat tcgtgccgga gcttgccgtt gccgacgacg gtgtgaacgt ccgtttcagg
     8581 attgccgacg gatactatat gtatcaggcg aaaatcgtcg gcaagaccaa tccggcggat
     8641 ttgttgggac agccttcttt cagcaagggc gaagagaagg aagacgagtt tttcggcagg
     8701 cagacggttt accatcacga agcgcaggtt gcctttcctt atgcaaaggc tgtcggcgaa
     8761 ccgtataaat tggttttgac ctatcagggc tgtgccgaag tcggcgtgtg ctatccgccc
     8821 gtggataccg agtttgatat ttccggcaac ggcacttacc atccgcaaac cgacgaaccg
     8881 gcatccgcca aagaccgctt tttgcagcct tcctctcaaa acggcagcgg ggcgctgccg
     8941 cccccgaagg gggatgaggg cggcgacagc cgtttcaagc tgtcttggga tacgctcaac
     9001 gccaatcttt tggcgttttt tctcgccggt ttgggtctga gttttaccgc ctgtatgtat
     9061 cccctgttgc cgattgtttc cagtattgtg gtcggcgaca aaaaggcggg caaggcgcgg
     9121 gcgtttgtgc tgtccgtcgt ttatgttcag ggtttggctc tgacttatac gctggtcggc
     9181 attgttgccg gactgacggg cgcgctgctg accgtatggt tgcagcaggc ttgggtcgtg
     9241 ttggcggcat cggctttgat ggtcgtcttg gcactgtcta tgttcgggct gttcaacatc
     9301 cagcttccca acgccgtgca gtcgtatttt cagaatcaaa gcagcaggct ttcaggcggt
     9361 aaaatcgttt ccgtctttat tatgggcata ttgtccgcgc tgattgtcgg gccgtgcgtc
     9421 gccccgccgc tggcatttgc tttgggctac atcggtcaga cgggcgatgc ggttttaggc
     9481 ggtttggcac tttacacttt ggcgttgggc accggcgttc cgctgattgc catcggcacg
     9541 ttcggcgggc atatcctgcc taaggcaggc gattggatga atgccgtcaa atacgctttc
     9601 ggctttatcc tgcttgccgt cgccgtttac ctcgccacgc cgcacttgcc ctattatctc
     9661 gtcgtcgcgc tgtacacgct gctgatgctg gttcctgcct gtatgctgct ggtcaacgga
     9721 cgcaggcaga aacgccgtcc gaaagctgtg gcattcgcat tgggcggcat attgctgata
     9781 ggcggcgcgt ggttcggctg gcagggcgca aacggcaaaa cgaccgcgct gcaccatttc
     9841 ctgaccctca atccgccggc cgaagcaggc aaatcttcgg aacacggaaa aatgtttgcc
     9901 gatactgccg cgctgaaggc agcgatggat acggcgttga aagaacatcc cgacaaaccc
     9961 gtcgttttgg atttttatgc cgactggtgc atttcctgca aagaaatggc ggcttacacg
    10021 ctcaatcagc cggaagtgca tcaggcagtc gatatggaac gctttttcca aatcgacgta
    10081 accgccaaca agcccgaaca tcaggcgttg ttgaaagaat acggtctgtt cgggccgccg
    10141 ggcgtgtttg tcgtccgctc cgacggcagc cgcagcgagc cgctgctggg ttttgtcaaa
    10201 gcagacaagt ttatcgagtg gtatgaacaa aaccgctgat tccgatgttt caaatgccgt
    10261 ctgaagttct cagacggcat ttttgtcaga aaggaaaacg gcaatatcca ctatacacac
    10321 ggaagcagtc taaagatgtg aaaaccgtgt gtataagtta gtttgcgtat tgaaattaaa
    10381 agataaaaat acgatgatta aaaaataggc ataagaaaag ataaacacag ccggtgtttg
    10441 ccggtgtgtg tatcttttgt ggaaaaacat cttaatgtca tgtattttat ggaaaataat
    10501 aacatgatta aaaaatagtc aatca
//
LOCUS       DAWGKF010000061        10235 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.061, whole genome shotgun sequence.
ACCESSION   DAWGKF010000061 DAWGKF010000000
VERSION     DAWGKF010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10235)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10235)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10235
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.061"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(324..1541)
                     /locus_tag="WHR07_001086"
     CDS             complement(324..1541)
                     /locus_tag="WHR07_001086"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEZ2130304.1"
                     /translation="MALIVHKYGGTSVGSPERIKNVAKRVAKARAEGHDIVVVVSAMS
                     GETNRLVALAHEMQEHPDPRELDVVLSTGEQVTIGLLAMALKDIGVEAKSYTGWQVAL
                     KTDTAHTKARIESIDDEKMRADLAAGKVVIVAGFQGISSEGDISTLGRGGSDTSAVAL
                     AAALKADECQIYTDVDGVYTTDPRVVPEARRMDTVTFEEMIELASLGSKVLQIRSVEF
                     AGKYKVRLRVLSSLQDGGNGTLITFEEDDNMERAAVTGIAFDKNQARINVRGVPDKPG
                     VAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDYKQTLEILSERQDSIGAAS
                     IDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMISTSEIKVSVLIDEKYME
                     LATRVLHKAFNLG"
     gene            complement(1743..2471)
                     /gene="rph"
                     /locus_tag="WHR07_001087"
     CDS             complement(1743..2471)
                     /gene="rph"
                     /locus_tag="WHR07_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HEZ2130305.1"
                     /translation="MPDYIRISRAADSLRDIKITPHFLPHTDGSCLIECGNTKVICTA
                     SIDENVPPFLRGKNQGWVTAEYGMLPASTASRMRREASAGKQSGRTQEIQRLIGRSLR
                     AVVDMEKLGERQILIDCDVIQADGGTRTASITGAFVALQIAVGKLVSDGILSENPIRE
                     AVAAVSVGVVNGVPLLDLDYPEDSGCDSDVNIVMTASGKIIEIQGTAEDAPFSLDELG
                     KLVALAQKGIGELLQHQQNALSAA"
     gene            complement(2553..3017)
                     /locus_tag="WHR07_001088"
     CDS             complement(2553..3017)
                     /locus_tag="WHR07_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEZ2130306.1"
                     /translation="MYKHLVVAVDGSETSINALKHAAELAGVNGARLTLVHVANPAEY
                     MALAPEFLQHESYEAAAVAQGNEVLDAAERTARELGVENTVKHLLVANKGAREMAQDL
                     VDYADENGADLLVLGTHGRTGLMHLLMGSFAETVMRQSHLPLLIIRSKAEEA"
     gene            3234..4010
                     /locus_tag="WHR07_001089"
     CDS             3234..4010
                     /locus_tag="WHR07_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine dehydratase"
                     /protein_id="HEZ2130307.1"
                     /translation="MSDNALTSSRRFGGIARLYGDSALAHFSQAHVCVVGVGGVGSWA
                     VEALARTGIGRLTLIDLDNVAESNVNRQLHALTGDFGKAKVTALRERVAQINPGCQVF
                     EIEDFVTEDNLPEYFGKGFDFVIDAIDQVRVKAAMAAYFVERKQPFVLSGGAGGQKNP
                     ALIQTADLSRVTHDPLLANLRYTLRKRYGFSRDTKANMRVPCVYSTENIVPPQSREAC
                     SADAAPQGLSCAGYGASMLVTASFGLYCAQAAVEHIADKK"
     gene            4255..5109
                     /locus_tag="WHR07_001090"
     CDS             4255..5109
                     /locus_tag="WHR07_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HEZ2130308.1"
                     /translation="MPPIPAPSAPSEHTVAWVFGQPVTDLPQDLFIPPDALKVVLGSF
                     QGPLDLLLYLIRKQNIDVLDIPMVKITEQYLHYIAQIETYQFDLAAEYLLMAAMLIEI
                     KSRLLLPRTETVEDEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLE
                     IAVEAKLPEVYITDLTQAWLGILSRAKHTRSHEVIKETISVRAQMTAILRRLNGHGIC
                     RFHDLFNPEQGAAYVVVNFIALLELAKEGLVGIVQEVGFGEIRISLNHEGAHSDGIFG
                     TQGKCDVF"
     gene            5151..6359
                     /gene="pncB"
                     /locus_tag="WHR07_001091"
     CDS             5151..6359
                     /gene="pncB"
                     /locus_tag="WHR07_001091"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEZ2130309.1"
                     /translation="MTGIIHSLLDTDLYKFTMLQVVLHQFPQTHSLYEFRCRNASTVY
                     PLADIKEDLEVELDALCQLRFTHDELDYLRSLRFIKSDFVDYLELFQLQRRFVEIGTD
                     DKDRLNIRIEGPMIQAMFFEIFILAIVNELYFRRLETPAVIEEGERRLQAKAARLKEI
                     AAAQNPDEPPFLISDFGTRRRYKLAWQEHVIRTLLEAAPSIVRGTSNVFLAKKLGITP
                     IGTMAHEFLQAFQALDVRLRNFQKAALESWVHEYRGDLGVALTDVVGMDAFLRDFDLY
                     FAKLFDGLRHDSGDPYVWGDKAYAHYQKLKIDSRTKMLTFSDGLDIERSWALHQYFKD
                     RFKTGFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKTMTNNSTFLAYLRQ
                     VFDVPEPETP"
     gene            6451..8169
                     /gene="argS"
                     /locus_tag="WHR07_001092"
     CDS             6451..8169
                     /gene="argS"
                     /locus_tag="WHR07_001092"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEZ2130310.1"
                     /translation="MNLHQTVEHEAAAAFAAAGIADSPVVLQPTKNAEHGDFQINGVM
                     GAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINLRLRPEFLAQNIQTALNDA
                     RFGIAKTDRPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLAFMGNTVIRQNHVG
                     DWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKARFDEDPAFADTAREYVVKLQG
                     GDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKYNDDLQAVVDDLVQKGL
                     AVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACLRYRFGTLHADRLLY
                     VVDHRQALHFEQLFTTSHKAGYLPENVGAAFVGFGTMMGKDGKPFKTRSGDTVKLVDL
                     LTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKNRTSDYVFDWDAMLS
                     FEGNTAPYLQYAYTRVQSVFRKASEWDATAPTVLTEPLEKQLAAELLKFEDVLQSVAD
                     TAYPHYLAAYLYQIATLFSRFYEACPILKAEGASRNSRLQLAKLTGDTLKQGLELLGI
                     DVLDVM"
     gene            8720..10138
                     /locus_tag="WHR07_001093"
     CDS             8720..10138
                     /locus_tag="WHR07_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HEZ2130311.1"
                     /translation="MNIHALLSKQWTLPPFLPKRLLLSLLILLAPNAMFWVLALLTAT
                     ARPIVNLDYLPAALLITLPWRFVKIAGVLAFWLAVLFDGLMMVIQLFPFMDLIGAINL
                     VPFILTAPAPYQIMTGLLLLYMLAMPFVLQKAAAKTDFRHIAVCAAVVAAAGYFIGHL
                     SYYDRGRMANIFGANNFYYAKSQAMLYTVSQNADFITAGLVDPVFLPLGNQQRAATHL
                     NEPKSQKILFIVAESWGLPANPELQNATFAKLLAQKDRFSVWESGSFPFIGATVEGEM
                     RELCAYGGLRGFALRRAPDEKFARCLPNRLKQEGYATFAMHGAGSSLYDRFSWYPRAG
                     FQEIKTAENLIGKKTCAIFGGVCDSELFGEVSAFFKKHDKGLFYWMTLTSHADYPESD
                     IFNHRLKCTEYGLPAETDLCRNFSLHTQFFDQLADLIQRPEMKGTEVIIVGDHPPPVG
                     NLNETFRYLKQGHVAWLHFKIK"
BASE COUNT         2359 a         3012 c         2578 g         2286 t
ORIGIN      
        1 cgcaacatta aatttctaga ttcccacttt cgtgggaatg acgggatgta tagtggatta
       61 acaaaaccag tacggcgttg cctcgcctta gctcaaagag aacgattctc taaggtgctg
      121 aagcaccaag tgaatcagtt ccgtactatt tgtactgtct gcggcttcgt cgccttgtcc
      181 tgatttttgt taatccacta taaatttaat ccactatatt ttttgttcca aagtcaaaat
      241 atgccgtccg aacattcggg cggcagacaa aacggcactg cccgataaag gcagtgccgt
      301 tgtccgtttc aaaccgtgaa acatcagccc aaattaaagg ctttatgcaa taccctggtt
      361 gccagttcca tgtatttttc atcaatcaat acggaaactt tgatttcgga ggtggaaatc
      421 atttggatgt tgataccctc ttcggcgagc gtgcggaaga ttttggcggc tacaccgacg
      481 tgcgaacgca tacccaaacc gactgcggag actttgcaca cggtgtcgtc gccgtcgata
      541 gaagccgcgc cgatactgtc ttgacgttcc gacaggattt ccaaagtctg cttgtaatcg
      601 ccgcgcggta cggtaaagga aaaatcggtt gtgccttcgc tgccgacatt ttggataatc
      661 atatcgactt cgatgttggc atcggcaacc gcgcctaaaa tctgataggc gacgccgggt
      721 ttgtcgggta cgccgcgcac gttgatgcgg gcttggtttt tgtcgaatgc gataccggtt
      781 acggcagctc tttccatatt gtcgtcctct tcaaaggtaa ttaaggtgcc gttgccgccg
      841 tcttgcaggc tgctcagtac gcgcaggcgc actttgtatt ttccggcaaa ttctactgaa
      901 cggatttgca aaactttcga gccaaggctg gccagctcaa tcatctcttc aaacgttacc
      961 gtatccatgc ggcgcgcttc gggtacgacg cgggggtcgg tggtgtaaac gccgtccacg
     1021 tcggtataga tttggcattc gtctgctttg agggctgcgg cgagcgcaac ggcggaggtg
     1081 tcggagccgc cgcgtccgag cgtggaaatg tcgccttcgc tgctgatgcc ttggaaaccg
     1141 gcgacgatga cgactttgcc ggcggcaagg tcggcacgca ttttttcgtc atcaatgctt
     1201 tcgatgcggg ctttggtgtg ggcggtatcg gttttgaggg cgacctgcca gccggtgtag
     1261 cttttggctt ccacgccgat gtctttcaat gccatcgcca aaaggccgat ggttacttgt
     1321 tcgccggtgg acaaaaccac gtccaattcg cgcggatcgg gatgctcctg catttcgtgc
     1381 gccaacgcga ccaggcggtt ggtttcaccg ctcatggcgg atacgacgac gacgatgtcg
     1441 tgtccttcgg cgcgggcttt ggcgacacgt ttggccacgt ttttaatgcg ttcgggcgag
     1501 cctacggatg tgccgccgta tttatgtacg attaacgcca tgtttcgtgc tttcttgtgt
     1561 gggattggtc gggcagcatg gtttgctgga aaagcggcta ttattactat tttttacatg
     1621 aagttcaaga acggactgcg ctttcccgcc tgccgtttga cagcggtcag cgaaaaacct
     1681 gttctttcag attgttgaca aaatgccgtc tgaacggttt tcagacggca tccggacgac
     1741 aatcaggcgg cggacaacgc attttgctgg tgttgcagca gttcgcctat gcctttttgc
     1801 gccagtgcaa ccagtttgcc caattcgtcc aaactgaacg gcgcgtcttc cgccgtacct
     1861 tggatttcga tgatttttcc cgatgcggtc atgacgatat tcacatcact gtcgcaaccg
     1921 gagtcttcgg gataatccaa atccaaaagc ggcacgccgt tcactacgcc tactgacaca
     1981 gcggcaacgg cttcgcggat ggggttttca ctcaaaatgc cgtctgaaac cagtttgccg
     2041 acggcgattt gcagcgcgac aaacgcaccg gtaatcgaag ccgtgcgcgt accgccatct
     2101 gcctgaatca catcgcagtc aatcaagatt tgtcgttcgc cgagtttttc catatctacg
     2161 accgcgcgta gcgaacgccc gataaggcgt tggatttctt gtgtgcgccc ggactgtttg
     2221 cccgccgaag cttcgcggcg catccgggaa gcagttgagg caggcagcat cccgtattcc
     2281 gccgttaccc agccttggtt tttaccgcgc agaaacggcg ggacgttttc atctatggaa
     2341 gcggtacaaa tcactttggt attgccgcat tcaataaggc acgaaccgtc cgtatgcggc
     2401 aggaaatgag gggtgatttt gatatcgcgc aggctgtccg cggcgcgcga gatgcggatg
     2461 taatcaggca tactgccctc ccgttaaaaa cagataaatt aaaaagcctt aaatatgaaa
     2521 aatcacattt aaggccttca aactgaaaat ttctacgcct cttcggcttt gctgcggata
     2581 atcaaaagcg gcaggtggct ttggcgcatt accgtttcgg caaaactgcc cattaaaagg
     2641 tgcatcagtc cggtacgtcc gtgcgtaccc aacaccagca ggtcggcacc gttttcatcg
     2701 gcataatcaa ccaaatcctg cgccatttca cgcgcaccct tattggcaac cagcaggtgt
     2761 ttgacggtat tttccacacc cagttcccgg gcggtgcgct cggcggcatc caaaacttcg
     2821 ttgccttgcg cgacggcggc ggcttcgtag ctttcgtgtt gcaaaaattc gggggcgagc
     2881 gccatatatt cggcaggatt ggcaacgtgt accaaagtca gacgcgcacc gttgaccccg
     2941 gcaagctcgg cggcatgttt cagggcattg atggacgttt cactgccgtc aacggcaaca
     3001 accagatgtt tgtacatatc gtattctcct tttgcaccgc ctcgcggtgc cctcttgtcg
     3061 gatgggcgca gggacagttt gcgccgtttc attatagacc cgctgtcggg ctttatacaa
     3121 cagccgaaca gcccgaccgc tttccagtat aatatgccgc ttccgtgcag tcaggcattt
     3181 tttgccggct ttcgttcact ttttgatttg acgcaatctt gcaggattcg accatgtccg
     3241 acaacgcttt gacctcttcg cgacgcttcg gcggcatcgc cagactctac ggagactctg
     3301 ccttggcgca cttttcacag gcacacgtct gcgtagtcgg cgtgggcggt gtcggctcgt
     3361 gggcggtcga ggctttggcg cggacgggca tcggacgttt gactttgatt gatttggaca
     3421 acgttgccga atcgaatgtc aaccgccagc tgcacgccct gaccggcgac ttcggcaaag
     3481 caaaagttac cgccttgcgc gaacgcgtcg cccaaatcaa cccaggatgc caagtgtttg
     3541 aaattgaaga tttcgttacc gaagacaatt tgccggaata cttcggaaaa ggttttgatt
     3601 tcgtcatcga cgcgatcgac caagtgcgcg tcaaagcagc aatggcggct tattttgtgg
     3661 aacgcaaaca accgtttgtc ctcagcggcg gcgcgggcgg acaaaaaaat ccggcgttaa
     3721 tccaaaccgc cgatttgagc cgcgtaaccc acgacccgct gcttgccaac ctgcgctaca
     3781 ccttgcggaa acgctacgga ttcagccgcg atacgaaagc aaatatgcgc gtgccttgcg
     3841 tgtattcgac cgaaaatatc gtgccgccgc agtctaggga ggcttgttcg gcagatgccg
     3901 ctccgcaagg cttgtcgtgc gccggctacg gtgcaagcat gctcgttacc gcttcgttcg
     3961 ggctatattg cgcacaggcg gcggtggaac acatcgcaga caaaaaataa gcaatgccgt
     4021 ctgaaacagg attcagacgg catttgaaca aacgcggcaa tcaagctgtc ggttcagaaa
     4081 aaccaacatc ggcacgccta aaactgtatt cacaatctac tccttttcaa aacatttgca
     4141 tttaaaagcc gttataatgc cgtctgaaca tctgcccgac cacattatac gtgaatgtcg
     4201 gcagattgtt ttcttttgta aacttatatt aaaatccact taccgattca cgccatgccg
     4261 cccatccctg ccccatctgc accatccgag cacactgtcg catgggtatt cggccaaccc
     4321 gttaccgatt tgccccagga tttgtttatt ccgcccgatg cattgaaagt cgtattgggc
     4381 agcttccaag gccctttgga tctactgctg tatctgatcc gcaaacagaa tatcgacgta
     4441 ctggatattc cgatggtgaa gattaccgag cagtatctgc actacatcgc ccaaatagaa
     4501 acctatcagt ttgatttggc ggcggaatat cttttgatgg cagcaatgct gattgaaatc
     4561 aaatcgcgcc tgctgctgcc gcgtaccgaa accgtcgaag acgaagaagc cgacccgcgt
     4621 gccgagttgg tgcgccgcct gctggcttac gaacagatga agctggcggc gcagggtttg
     4681 gacgcgctgc cccgagccgg acgggatttc gcgtgggctt acctgccgct ggaaattgcc
     4741 gtcgaagcca agctgcccga agtctatatt accgacttga cgcaagcgtg gctgggtatt
     4801 ttgtctcggg caaaacacac gcgcagccac gaagtaatca aagaaaccat ctccgtgcgc
     4861 gcgcaaatga cggcaatcct gcgccgtttg aacggacacg ggatatgcag gtttcacgac
     4921 ctgttcaatc ccgaacaggg cgcggcttac gtggtcgtca acttcatcgc actgttggag
     4981 cttgccaaag aaggtttggt cggaatcgta caggaagtcg gtttcggaga aatccgaatc
     5041 agcctcaatc atgagggggc acattcagac ggcattttcg gtacacaggg caaatgtgat
     5101 gtgttctaat acacccccaa gccgccacca aaaatcggga gacacgccat atgaccggca
     5161 tcatacattc gctgcttgac accgacctct acaaattcac tatgctgcaa gtagtcctgc
     5221 accagtttcc gcagacgcac agcctttacg aattccgatg ccgcaacgcc tcgaccgtct
     5281 atccgcttgc cgacatcaaa gaagacttgg aagtcgaact cgacgcgctc tgccaactac
     5341 gcttcaccca cgacgaactc gactacctcc gcagcctgcg tttcatcaaa agcgactttg
     5401 tcgattatct cgaactcttc cagctccaac gccgctttgt cgaaatcggc acagacgata
     5461 aagaccgtct gaacatccgc atcgaaggtc cgatgataca ggcgatgttt tttgaaatct
     5521 tcatcctcgc cattgtcaac gaactttact tccgccgcct ggaaacccct gcagtcatag
     5581 aagaaggcga acgccggctt caagccaaag ccgcgcgcct caaagaaatc gccgccgcac
     5641 aaaaccccga cgaaccgccc ttcctgattt ccgacttcgg cacgcgccgc cgctacaagc
     5701 tcgcgtggca ggaacacgtc atccgcaccc tgctcgaagc cgccccaagc atcgtgcgcg
     5761 gcaccagcaa tgtctttctc gccaaaaaac tcggcatcac ccccatcggc accatggcgc
     5821 acgagttcct gcaggcattc caggccctcg acgtacgcct gcggaatttc caaaaggccg
     5881 cgctcgaaag ctgggtgcac gaataccggg gcgatttggg cgttgccctg accgacgtgg
     5941 tcggtatgga tgccttcctg cgcgatttcg acctctattt cgccaaactc ttcgacgggc
     6001 tgcgccacga cagcggcgac ccttacgttt ggggcgacaa agcctacgcc cactatcaaa
     6061 agctcaaaat cgacagccgc accaaaatgc tgactttctc cgacgggctg gacatcgaac
     6121 gctcttgggc attgcaccaa tatttcaaag accgcttcaa aaccggcttc ggcatcggca
     6181 ccaacctcac caacgatatg gggcatacac ccttgaatat cgtcttgaaa ctggtcgaat
     6241 gcaacgggca gtccgtcgcc aagctgtccg actctccggg caaaaccatg accaacaaca
     6301 gcaccttcct cgcctacctg cgccaagtgt tcgacgtacc cgaacccgaa acgccgtaaa
     6361 ccggcagaaa aagcgcacaa ttcctgtttc tgccgcataa aatcttttaa aataccgcct
     6421 gatttgaatt taaccgaaag accgaacttc atgaacctac atcaaaccgt cgaacacgaa
     6481 gccgccgccg cctttgccgc cgcaggcatc gccgacagtc ccgttgtttt gcagccgacc
     6541 aaaaatgccg aacacggcga tttccaaatc aacggcgtga tgggtgcggc gaaaaaagcc
     6601 aaacaaaatc cgcgcgaact ggcgcaaaag gtcgccgacg cattggcggg caacgccgtc
     6661 atcgaaagcg cggaagtcgc cggtccgggc tttatcaacc tgcgcctgcg ccccgaattt
     6721 ctcgcgcaaa acattcagac ggccttgaac gacgcgcgtt tcggcatagc gaaaaccgac
     6781 aggccgcaaa ccgtcgtcat cgactattcc tcacccaatc tggcaaagga aatgcacgtc
     6841 ggccacctgc gttccagcat catcggcgac agcatttcgc gcgtgttggc atttatgggc
     6901 aacaccgtca tccgccaaaa tcacgtcggc gactggggta cgcagttcgg catgttggtc
     6961 gcttatttgg tcgagcagca aaaagacaat gccgcgttcg agctggcgga tttggagcag
     7021 ttttaccgcg ccgccaaagc gcgctttgac gaagaccctg cctttgccga caccgcacgc
     7081 gaatacgttg tgaagctgca aggcggcgat gaaaccgttt tggcgttgtg gaaacagttt
     7141 gtcgatattt cgctctcaca cgcccaagcc gtttacgaca cgctgggctt gaagctgcgc
     7201 cccgaagacg tggcaggcga atcgaagtac aacgacgatt tgcaagccgt ggtcgatgac
     7261 ttggttcaaa aaggtctggc agtcgaagac gacggcgcga aagtcgtatt cttggacgag
     7321 tttaaaaaca aagagggcga acctgccgca tttatcgtgc aaaaacaagg cggcggcttc
     7381 ctttatgctt ccaccgactt ggcatgtttg cgctaccgtt tcggcacgct tcatgccgac
     7441 cgcctgctgt acgtcgtcga ccaccgccaa gccctgcact tcgagcaact ctttaccact
     7501 tcccacaaag caggctatct gccggaaaac gtcggcgcgg catttgtcgg cttcggcacg
     7561 atgatgggca aagacggcaa accgttcaaa acgcgcagcg gcgacaccgt aaaactggtc
     7621 gatctgctga ccgaagccgt cgaacgcgcc accgctttgg tgaaagaaaa aaatcccgaa
     7681 ttgggcgcgg atgaagccgc caaaatcggc aagaccgtcg gcatcggcgc ggtcaaatac
     7741 gccgatttga gcaaaaaccg caccagcgat tatgtgttcg actgggacgc catgctctcg
     7801 tttgaaggca acaccgcccc ctacctgcaa tacgcctaca cccgcgtgca aagcgtgttc
     7861 cgcaaagcaa gcgaatggga cgcaactgcg ccaaccgttt tgaccgaacc tttggaaaaa
     7921 cagcttgccg ccgagctgct gaaattcgaa gacgtgctgc aaagcgtggc ggacacggcg
     7981 tatccgcact acctcgccgc ctacctctat caaattgcca ccctgttcag ccgcttctac
     8041 gaagcctgcc cgattttgaa agccgaaggc gcaagccgga acagccgcct gcaactggcg
     8101 aagctcaccg gcgacacgct gaaacaaggc ttggaattgt taggcatcga tgtgttggac
     8161 gtaatgtaaa accgcaccgc ccgattgcgg acaacagccc tgccatcctt atccgaatct
     8221 gaaaaaagcg gcgcgataca ccgtatccgc cgcccctccc aaaatgcgaa acagacaaac
     8281 gccaagcaag caagcaagca agcaagcaag caagcaagca agcaagcaaa aaattataac
     8341 ccccttcctg ccgacgcacg cactttccgc gcggcgcatt cccctttttc cgcccctcaa
     8401 acccgccttt tcttcaggca gggtttcagc ccgccccctt tccctgtttt cctttccccg
     8461 acacgcgcgc gcgacccctg ccgcatcgtg ccgcactttc gcgcccggac ggcatcgttc
     8521 cgccatccgg ttctctgttt caaatacccc tgtttcagaa agaaattcta gatgcttcaa
     8581 cacacaggac gacatataaa gcgtcgccct atatgttgcc ctgatttgga aggggttacg
     8641 cctcccaaat aaagcctgat cctgccgccc cgaaggacag atgtccgagt ggcggggttt
     8701 caaccgaaaa ggaaatacga tgaatattca cgccctgctc tccaaacaat ggacgctgcc
     8761 gccattcctg ccgaaacggc tgctgctgtc cctgctgata ctgctggccc ccaatgcgat
     8821 gttttgggtt ttggcactgc tgaccgccac cgcccgcccg attgtcaatt tggactacct
     8881 tcccgccgcg ctgctgatca ccctgccttg gcgtttcgtc aaaattgccg gcgtattggc
     8941 gttttggctg gcagttttgt ttgacgggct gatgatggtg atccagcttt tcccttttat
     9001 ggacctcatc ggtgccatca acctcgtccc cttcatcctg accgcccccg ccccttatca
     9061 gataatgacc gggctgttgc tgctgtatat gctggcgatg ccgtttgtgt tgcagaaagc
     9121 cgccgccaaa accgacttcc ggcacattgc cgtctgcgcc gccgttgtgg cggcagccgg
     9181 ctatttcatc ggccatttga gttactacga ccggggtcgg atggccaata tcttcggcgc
     9241 aaacaacttc tactacgcca aaagtcaggc gatgctctac accgtcagcc agaatgccga
     9301 ctttattacc gccggcctgg tcgatcccgt cttcctcccc ttgggcaatc aacagcgtgc
     9361 cgccacgcat ctgaacgagc cgaaatctca aaaaatcctc tttatcgtcg ccgaatcttg
     9421 ggggctgccg gccaatcccg aacttcaaaa cgccactttt gccaaactgc tggcgcaaaa
     9481 agaccgtttt tcggtttggg aaagcggcag ttttcccttt atcggcgcga cggtcgaagg
     9541 cgaaatgcgc gaactgtgcg cctacggcgg tttgcgcggg ttcgcactgc gccgcgcgcc
     9601 cgacgaaaaa tttgcccgct gcctccccaa ccgtttgaaa caagaaggtt acgccacctt
     9661 tgcgatgcac ggcgcgggca gttcgcttta cgaccgcttc agctggtatc cgagggcggg
     9721 ctttcaagaa atcaaaaccg ccgaaaacct gatcggtaaa aaaacctgcg ccattttcgg
     9781 cggcgtgtgc gacagcgagc tgttcggcga agtgtcggca tttttcaaaa aacacgacaa
     9841 gggactgttt tactggatga cgctgaccag ccacgccgac tatcccgaat ccgacatttt
     9901 caaccacagg ctcaaatgca ccgaatacgg cctgcccgcc gaaaccgacc tctgccgcaa
     9961 cttcagcctg cacacccaat tcttcgacca actggcggat ttgatccaac gccccgaaat
    10021 gaaaggcacg gaagtcatca tcgtcggcga ccatccgccg cccgtcggca acctcaatga
    10081 aaccttccgc tacctcaaac aggggcacgt cgcctggctg cacttcaaaa tcaaataaca
    10141 acaatgccgt ctgaacgcac caacagcctt cagacggcat tttgcagaca gaccgaccct
    10201 tcaagcccac ttttttcatc atctccgata aattg
//
LOCUS       DAWGKF010000062        10202 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.062, whole genome shotgun sequence.
ACCESSION   DAWGKF010000062 DAWGKF010000000
VERSION     DAWGKF010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10202)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10202)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10202
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.062"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(166..360)
                     /locus_tag="WHR07_001094"
     CDS             complement(166..360)
                     /locus_tag="WHR07_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HEZ2130312.1"
                     /translation="MKHKLSSWWKTIKLTANLMAGVPDYENYVAQQRKHNPNAPVMTK
                     LQFQDYCRKRRCGANGGRCC"
     gene            complement(350..2431)
                     /locus_tag="WHR07_001095"
     CDS             complement(350..2431)
                     /locus_tag="WHR07_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HEZ2130313.1"
                     /translation="MKSLKTFLIWGIVVLVGLASFTTLALSRGEQVSAVWMVTAAISV
                     YCIAYRFYSLYIANRVMRLDPNRLTPAERHNDGLDYVPTHKGVLFGHHFAAIAGAGPL
                     VGPVLAAQMGYLPGTLWIIFGVVFAGAVQDMMVLFVSMRRDGKSLGDIVKQELGTVPG
                     VIASIGILMIMVIIMAVLALIVVKALVHSPWGTFTIAATMPIALFMGIYTRYIRPGKI
                     GEISIVGFILLMLAVIYGEDVAKSSIGHWFDLDGIQLTWAIMIYGFVASVLPVWLLLT
                     PRDYLSTFLKIGTIAALALGIVIVNPALQMPAVTHFIDGSGPVFSGALFPFLFITIAC
                     GAVSGFHALISSGTTPKMLENETHVRMIGYGGMLMESFVAIMALAAAASLDPGVYFAM
                     NSPAALIGTDANTAAEVITTKLQFPVDAATLLHTAKEVGENTILSRAGGAPTLAVGMA
                     HIMSRLIPGEAMMAFWYHFALLFEALFILTAVDAGTRVARFMIQDLGSIFYKPFGNTD
                     SIPANLIATFFAVALWGYFLYTGVTDPLGGINSLWPLFGIANQMLAGVALIMCAVVLI
                     KMKRDRYVWVVLVPAVGVLFVTCYAGLQKLFHSDPRISFLAHAGKYSDALAKNEVLAP
                     AKDIGEMAQIIFNDKINAGLTILFLSVVVIVAAYGLRTALKARKVGWPTAKEIPAVYR
                     DSKQPEAQSEA"
     gene            2907..3287
                     /locus_tag="WHR07_001096"
     CDS             2907..3287
                     /locus_tag="WHR07_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
                     /protein_id="HEZ2130314.1"
                     /translation="MNIRFFALTVPVLSLAACAVPETYDGGGRGHMPPVQNQARPADF
                     RAFSCENGLSVRVRRLDGGRIALRLDGRRAVLSSDVAASGERYTAEHGLFGNGTEWHQ
                     KGGEAFFGFTDAYGNSVETSCRAR"
     gene            complement(3571..4197)
                     /locus_tag="WHR07_001097"
     CDS             complement(3571..4197)
                     /locus_tag="WHR07_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130315.1"
                     /translation="MEKIEKFKSELLDDIFQYIQCISIFVYKKKIYYLIDYKENFELN
                     AKISFDIYLREGIITKEQYNYDYKNYRNGIWQLTKDNFESYLQSDSVIVLKKDELKEL
                     MFQGFTSAEAVRLYSVVENKLSYNDPISDSGRQSDFLKINQISSRLPLFYVNFDTEVY
                     LHMDWDRCHEDYVYDGWFSKAMDFGYLIPDEFCYWKIEGRDYWKFGQL"
     gene            complement(4351..4842)
                     /locus_tag="WHR07_001098"
     CDS             complement(4351..4842)
                     /locus_tag="WHR07_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CdiI family contact-dependent growth inhibition
                     immunity protein"
                     /protein_id="HEZ2130316.1"
                     /translation="MIFKQDQNYWAVFYANEEALIVQTCSGLGLTAIDHLYPPHILPL
                     DTDNETLGTTVLQALANSRTLDNEAERIDFLKQENFKPRYEDWVAKLCGNLGYKTKRA
                     LFKNMMSVDIWLHNGCLKISPSRHVKLEAWDAIDADDVILSLDNSPEEIGAGLKLALS
                     RCR"
     gene            5175..6608
                     /locus_tag="WHR07_001099"
     CDS             5175..6608
                     /locus_tag="WHR07_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEZ2130317.1"
                     /translation="MNEYSQLIKHPDISLSPISDGIGVGNPATGEILAYVRKTDSDKL
                     KNLIQKAAAAQKLWAAKTALERADILWCWYFLVKENKEALARLMTMEQGKSLTESRGE
                     IDYAASFVRWFAEEARRIDGDVLTSVKASQKLVVLKQPVGVTAAITPWNFPSAMIARK
                     AAPALAVGCAMIIKPASLTPLSAYALASLAYEAGVPQDLLPVVSGRASEIGREFATNP
                     IIRKISFTGSTEVGAKIFADSAADIKKLSLELGGNAPFIVFDDADLDKAVEGALASKF
                     RNSGQTCVCTNRVYAQSGIYDAFCRKLSEKAAALKLGNGLEDGVNQGPLIEEKAVEKV
                     EQHIADALSKGAICLTGGKRSALGGTFFEPTVLSGITAQMAVAREETFGPLCPVFRFE
                     TEAEVIEAANNTEYGLAAYLFTADTARQWRVGEALEYGMVGINTGLISNEAAPFGGVK
                     RSGLGREGSKYGADEYLELKYLCMDVG"
     gene            6718..7506
                     /locus_tag="WHR07_001100"
     CDS             6718..7506
                     /locus_tag="WHR07_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimb protein"
                     /protein_id="HEZ2130318.1"
                     /translation="MMENGKTVPRWRFALKSAGWHLLISLSVAGLAALLVFKVWYPYP
                     YAELTGGLSLYQLVVAVDIVCGPLLTLILASPKKKTKARMVDFSMVGIIQLAALVYGL
                     HSVSLARPVVEAFEQDRMTIVTAAEVVVEDLHKAPEGLQSLSWFGIRRIALKEPEDAD
                     EKNKTLDLSLKGIEPSMRPDQWLPYSDKEAEEIRKHLKPLKVLADARKTTVADILKQA
                     GLAEGEELYYLPFTSSRQKEWIVITDKEGNTKGYAPIDGFIITP"
     gene            7874..9430
                     /locus_tag="WHR07_001101"
     CDS             7874..9430
                     /locus_tag="WHR07_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEZ2130319.1"
                     /translation="MDFSWLAEPHTWIGFATLLVLEVVLGIDNLVFVAILANKVQPAR
                     RDRARIIGLGLAVVIRIIMLAFMAHIITLTEPLFQIGGLAVSGKDMIMLAGGIFLLYK
                     ATTELHERLEGHNRFTVADNQKKHAPFWGVVAQILILDAVFSIDSVITAVAMVDHIVV
                     AMGAVVVAMAVMISASKLLTEFVDRHPTVVMLCLGFLLMIGFSLIAEAFHFHIPKGYL
                     YAAIGFSILIELFNQISQRNSRKNDYIGSSWRKRTAENVLGMMGIRESVLADAGGESG
                     DDAHFEENEKSMIRSVLTLAERPIMGVMIPRRDIERLDISQSREEQCAQLQNTPYSRL
                     LVVGKAGVDEPLGYINKKDLLSQLLETGGLDIQTALRQPLVLPDSTTALGAIELFRQS
                     SADYALVVDEFGAVLGMVTMKDLLETIAGEFPEEFEREEEPAVQGNPDESLTVEGALE
                     YVELAPQLNLPQQEEDADFHTVAGLIMEELQTIPDVGDFADFHGWRFEVVEKEGQRIE
                     RVKITKLPEE"
     gene            9447..10193
                     /gene="surE"
                     /locus_tag="WHR07_001102"
     CDS             9447..10193
                     /gene="surE"
                     /locus_tag="WHR07_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEZ2130320.1"
                     /translation="MNVLISNDDGYLSEGIAVLARVTAEFANVRVVAPERDRSGVSNS
                     LTLERPLQLKQAQNGFYYVNGTPTDCIHIGQSVFSDFQADFVFSGINRGANMGDDTLY
                     SGTVAAATEAYLMGIPAVAFSLNDASGRYWATAEKALWTLLAHFFKNPPQSPILWNIN
                     IPAVEPEDVRGIKIARLGRRHHGQNVIPARNPRGEQIYWIGPVGRVSDKEEGTDFGEC
                     GAGFITVTPLQIDLTAYPDMAETAAFWHAD"
BASE COUNT         2457 a         2538 c         2752 g         2455 t
ORIGIN      
        1 gctcaaagag aacgattctc taaggtgctg aagcaccaag tgaatcggtt tcgtactatt
       61 tgtactgtct gcggcttcgt cgccttgtcc tgatttttgt taatccacta tattataaaa
      121 attccgtctg aagcggcgtt cagacggaat ttgtttcaag caggcttaac agcagcgtcc
      181 gccgtttgcg ccgcagcggc gtttgcggca atagtcttga aactgcagct tggtcatcac
      241 aggggcgttg ggattatgtt tgcgctgctg tgcaacgtag ttttcataat cgggcacgcc
      301 tgccatcaag tttgctgtca gcttgatggt tttccaccaa gacgagagct tatgcttcac
      361 tttgtgcctc cggctgtttg ctgtcgcggt acaccgccgg gatttctttg gcggtcggcc
      421 agccgacttt gcgtgctttg agggcggtac gcaaaccgta cgcggcgaca atcacgacaa
      481 ccgacaagaa gaggatggtc agaccggcat taatcttgtc gttgaagatg atttgcgcca
      541 tttcgccgat gtctttggca ggcgcaagga cttcgttttt agccaatgcg tcgctgtatt
      601 tgccggcgtg ggcaaggaag ctgatgcgcg ggtcgctgtg gaacagtttt tgcaggccgg
      661 cgtagcaggt tacgaacagt acgccgacgg cgggaacgag taccacccaa acataacggt
      721 cgcgtttcat cttaatcagc accacggcgc acataatcaa ggccacgcct gccagcattt
      781 ggttggcgat gccgaacaaa ggccagagcg agttgatgcc gcccagcggg tcggttacgc
      841 cggtgtagag gaagtagccc cacaatgcca cggcgaagaa ggtcgcaatc aggttggcgg
      901 ggatggagtc ggtgttgccg aaaggtttgt agaagatgct gcccaagtct tgaatcataa
      961 aacgtgcgac gcgcgtaccg gcatcgacgg cggtcaggat gaacaaggct tcaaacaata
     1021 gggcgaagtg ataccagaac gccatcatcg cctcgcccgg aatcaggcgg ctcataatgt
     1081 gcgccatacc gactgcgagg gttggcgcac cgcctgcacg ggaaaggatg gtgttttcgc
     1141 ccacttcctt agcggtatgc aacagggttg ccgcatcgac agggaattgc agcttggtgg
     1201 taatcacttc ggcggcggtg ttggcatccg taccgatcag ggcggcaggg ctgttcatgg
     1261 cgaagtacac gccgggatca agcgatgcgg cggcggcaag cgccataatg gctacgaaac
     1321 tttccatcaa cataccgccg taaccaatca tacggacgtg ggtttcgttt tccagcattt
     1381 tcggcgtggt gccggaggaa atcagcgcgt ggaagcccga aaccgcaccg caggcgatgg
     1441 taatgaacaa gaacgggaac aatgcgcctg agaataccgg acccgaaccg tcgataaagt
     1501 gggtaaccgc aggcatttgc aaagcgggat tgacgatgac gatacccaaa gccaaggccg
     1561 caatcgtacc gattttcagg aaggtagaga gatagtcgcg cggagtgagc agcaaccata
     1621 cgggcaatac ggaggcgaca aagccgtaaa tcataatcgc ccaagtgagc tggatgccgt
     1681 caaggtcgaa ccaatgtccg atggaacttt tcgccacatc ttcgccgtaa attaccgcca
     1741 gcatcagcaa aataaagccg acgatggaaa tctcgccgat tttgcccgga cggatatagc
     1801 gcgtgtaaat acccataaac agggcaatcg gcatagtggc ggcgatggta aacgtacccc
     1861 aagggctgtg aaccaatgct ttcacaacga tcaatgccaa caccgccata atgatgacca
     1921 taatcatcaa aataccgatg gatgcaatca cgccggggac agtgccgagt tcctgtttca
     1981 caatatcgcc caaagactta ccgtcacggc gcatagaaac aaacagtacc atcatatcct
     2041 gtaccgcgcc ggcaaacacc acgccgaaga taatccacaa agtaccgggc aggtaaccca
     2101 tttgcgccgc caaaaccggg ccgaccaaag ggcccgcgcc cgcaatcgcg gcaaagtggt
     2161 gtccgaacaa tacgcctttg tgcgtcggaa cgtagtccaa gccgtcgttg tggcgttctg
     2221 ccggagtcag gcggttagga tcgagccgca ttacgcggtt ggcgatgtag aggctgtaaa
     2281 aacggtaggc gatgcagtaa acggatatgg cggcggtaac catccatacc gcgctgacct
     2341 gttcgcctcg gctgagggcc agagtggtaa aggatgctaa gccgaccagt accactatgc
     2401 cccaaatgag gaaggttttg agtgatttca tcgaataaat ccttatctca cactgtcgga
     2461 atatgcctga acggcgggaa acggatgacc gcctgccggc acgggcacaa accggagtct
     2521 gaatgattga cgaagtatga aacagtgcgc ttgtcgggat ttgtgcctta tgcccgcatc
     2581 aaacagtgca gggatgcggg cgcacaaaac gttaaacgcc gaataggatt ttaacgcaaa
     2641 ttagcacact gatagcggtt tttacttgga atttggaaaa aatttacatt ccttcgggcg
     2701 gacaggcggg tttggacggc atcgtcaggc aaaaggcggc gccggaagac gggtaaagaa
     2761 ggggcgcgca atccggatta ttgattcatc gcgggtaaat tccggttatc gggcttgtgt
     2821 gtttgcgcgt ccgtttatag tatggcgttg ccgcagcttg gaatcagggc ggttgtttca
     2881 tatcttattt ttattgggga gcttttatga atatcaggtt tttcgcactg accgtgccgg
     2941 ttttgtctct ggcggcctgt gccgtgccgg agacgtatga tggcggcgga cgcgggcata
     3001 tgccgcccgt tcaaaaccaa gcccgcccgg cagattttcg ggcattttcc tgcgagaacg
     3061 gtttgtctgt gcgcgtccgc cgtttggacg gcggcagaat cgcgttgcgg ttggacggca
     3121 ggcgtgccgt cctctcttcc gacgttgccg catccggcga acgctatacc gccgaacacg
     3181 gtttgttcgg aaacggaacc gagtggcacc agaaaggcgg cgaagccttt ttcggcttta
     3241 ccgatgccta cggcaattcg gtcgaaactt cctgccgcgc ccgttaaacg gggcagcctg
     3301 tttgaaccgc cgtccggatt tttcgggcgg ttttttatgt cggatttgtt ttgcagttcg
     3361 gcctccggca gggttttggc tacctgatac cgtccgtaac ttcgggtatt gccaagtttg
     3421 tcggcaacgg ccgctgcgac ttggtcggcg tttctgccga actcctgcgt tacttccctt
     3481 tgtaggttga tctctttggc aaccgcgtct ttgtcgaagc tgtttttcag acgacctttt
     3541 gaattcatac aagctatggc ttgcttatct ttataattgt ccaaatttcc aataatcccg
     3601 tccttcaatt ttccaataac aaaattcgtc cggtattaaa tacccaaaat ccatcgcctt
     3661 tgaaaaccag ccgtcataaa cataatcttc atgacatctg tcccaatcca tatgtaagta
     3721 tacttcagtg tcaaaattga catagaataa aggcagcctc gaggaaatct gattgatttt
     3781 taagaaatca ctttgccggc cggagtctga gataggatca ttgtacgaca gcttgttctc
     3841 gacaacggaa tataacctta ccgcttcagc agaagtaaat ccctgaaaca tcagttcctt
     3901 caattcatcc ttttttaata caatgactga atccgattga agatagcttt caaaattgtc
     3961 cttagttaac tgccagatac cattacggta atttttataa tcataattat attgttcttt
     4021 tgttataatt ccttctctta gataaatatc aaaagatatt tttgcattta attcaaaatt
     4081 ttccttataa tcaatcaagt aatatatctt tttcttatag acaaaaatag atatgcattg
     4141 aatatactga aagatgtcat ccaataattc agatttaaat ttctcaatct tttccatatt
     4201 tgccaaattc cttaataact ttatcttcag caagccgtaa cccacattaa atctgcaggt
     4261 aaggtgtggt acgcacgcca gtgaacttga gtctaataaa aaggtcgtct gaaacatttt
     4321 tccggctttc agacggcctt ttgccaaata ttatcggcag cggctcaatg ccaactttaa
     4381 acctgctccg atttcttcag ggctgttatc caatgataaa attacatcgt ctgcatcaat
     4441 ggcatcccac gcttccagct tgacatggcg gctcgggctg attttcaggc agccgttgtg
     4501 cagccaaata tccacgctca tcatgttttt aaatagggcg cgtttggttt tatagcccaa
     4561 gttcccgcat agcttggcaa cccaatcctc atagcgtggt ttaaaatttt cctgttttaa
     4621 aaaatcaata cgttcagctt cgttgtctaa cgtcctgctg tttgccaacg cttgcaagac
     4681 cgttgtgcct aaagtttcat tgtcggtatc caatggcagg atatgggggg gatataggtg
     4741 gtctattgcc gttaacccca aacctgaaca tgtttgaaca atcagagctt cttcattcgc
     4801 ataaaaaact gcccaataat tttgatcctg tttaaaaatc attatttgat ctccgtaatt
     4861 ttgactttaa tgtttcaatt tttgccatac tctaccacac gttgcaactg caatctttgc
     4921 tctttatata ttgcacccca tcaaagggct gcattacttt tctttctaaa gattactttt
     4981 gtataaaaag tatttttctt aagcgatagg gattacgtcc gcgccatatt cagacatcgc
     5041 ccggatgttg cgctgcccga tcggatgctt cagacggcat cggaagggtt tgcggttttg
     5101 gaatatgaag atgataatgt ccgcgagatt gacggcattt gaaagcggtt atcctacata
     5161 ccggaggaca cgaaatgaac gaatattccc aattaatcaa gcatcccgat atttcccttt
     5221 ccccgatttc agacggcatc ggggtcggca atccggcgac gggtgaaatt ttggcgtatg
     5281 tccgcaagac ggattcggac aaactgaaaa acctgattca aaaggcggcg gcagcgcaaa
     5341 aattatgggc ggcgaaaact gctttggaac gcgccgacat attgtggtgt tggtattttt
     5401 tagttaaaga aaacaaagaa gcactggcgc gcctgatgac gatggagcag ggcaaaagcc
     5461 tgaccgagtc gcgcggcgaa attgattatg cggcttcgtt tgtgcgctgg tttgccgaag
     5521 aggcgcggcg gattgacggc gatgtgctga caagcgtgaa agcgtcgcaa aaactggtcg
     5581 tgttgaaaca gcccgtcggc gttaccgctg cgattacgcc gtggaacttt ccgtccgcga
     5641 tgattgcgcg caaggccgcg cctgctttgg cggtgggttg cgcgatgatc atcaaacccg
     5701 catcgctcac gcctttgagt gcgtatgcct tggcttcgtt ggcttacgaa gcgggcgtac
     5761 cacaggattt gttgcccgtc gtcagcggcc gcgcatcgga aatcggccgt gaatttgcca
     5821 cgaacccgat tatccgcaaa atcagcttca ccggctctac cgaagtcggt gcgaaaattt
     5881 ttgccgacag cgcggcggac attaaaaaac tcagtttgga gctgggcggc aacgcgccgt
     5941 ttatcgtgtt tgacgatgcc gatttggaca aagccgtcga aggtgcgctc gccagcaagt
     6001 tccgcaacag cggtcagacc tgcgtctgca ccaaccgcgt ttacgcccaa tcgggcattt
     6061 acgacgcatt ttgccgcaaa ttgagtgaaa aagcagccgc gctcaaattg ggcaacggct
     6121 tggaggatgg cgtaaaccaa gggccgttga ttgaggaaaa agcggtggaa aaagtcgagc
     6181 agcacatcgc cgacgcgctc tcaaaaggcg cgatctgtct gaccggcggc aaacgcagcg
     6241 cgttgggcgg aacgtttttt gagccgactg tcttaagcgg cattacggca caaatggcgg
     6301 tggcacgcga agaaaccttc gggcctttgt gtccggtatt ccgttttgaa accgaagccg
     6361 aggtcatcga ggctgcgaac aatacggaat acggtttggc agcttacctt ttcaccgccg
     6421 acaccgcccg ccaatggcgc gtcggcgaag ccttggaata cggcatggtt ggcatcaata
     6481 cgggcttaat cagtaatgaa gcggcaccgt ttggcggcgt gaaacgcagc ggtttgggac
     6541 gtgaaggcag caaatacggt gcggacgaat atctagaatt gaaatatctg tgtatggatg
     6601 tcgggtgacg gatgccgtct gaatggcagg gtttcagacg gtgccgcatt ttaagcagtc
     6661 tctatctgtt gtacaatgcg ccctgttttt acggttattt ttgatgtgaa ttaagatatg
     6721 atggaaaacg gaaaaacagt cccgagatgg cgttttgcct tgaaaagtgc gggttggcat
     6781 ctcttaatca gcctgtcggt tgcagggctg gcggcattgc tggtttttaa ggtttggtat
     6841 ccttatcctt atgccgagct gacgggaggg ctgtcgcttt atcagctggt ggtggctgtc
     6901 gatattgtat gtggtccgct gctgacttta attttggcaa gcccgaagaa aaagacaaag
     6961 gcacgcatgg tcgatttttc catggtcggc atcatccagc tggcggcttt ggtgtacggt
     7021 ctgcacagcg tttcgctggc gcgtcctgtg gtggaagcgt ttgaacagga tcgtatgacc
     7081 attgttacgg cggcggaagt cgtggtcgaa gatttgcaca aagcccccga agggctgcaa
     7141 agcctgtcgt ggttcggcat ccgccgcatt gcattgaaag aacctgagga tgcggatgag
     7201 aagaacaaga cgctggattt gtccctgaaa ggtatcgagc cgagtatgcg tcccgaccag
     7261 tggctgccgt attccgacaa ggaagcagaa gaaatccgca aacatctgaa accgctgaaa
     7321 gtcttggcgg atgcgagaaa aacgacggtt gcggacattc tgaaacaggc aggtctcgcc
     7381 gaaggggagg agctgtatta cctgccgttt accagcagca ggcagaaaga gtggatagtc
     7441 attaccgata aagagggcaa caccaaaggc tacgcgccga tagacggctt catcatcacc
     7501 ccttaagcgt tgggactccg tccgcactcg aacatccgtt cttcgcggcg gtagaatcag
     7561 actgtatttg agaggggcgc aacccctcaa tcagggcaac acatagggga aggctttatg
     7621 tgccgtccgt gtgttgaaac atttcaaaat aagctcatgc cgtccgaaca tcctttcaga
     7681 cggtatggca ttttgccatt gccccgataa gctgttaaac tatttaaatt atttcgaccg
     7741 aaggtacacg cacatgcaag accccgagca gagcagcaag cccgcccgcc gttttttgtg
     7801 cgtaccgtct gttcaggcag cttgagcgct tcaggctgcc ttttcgcgtt tgaacttgag
     7861 gaatacgaaa atcatggatt tcagttggtt ggcagaaccg catacctgga taggttttgc
     7921 cacgcttttg gtgttggaag ttgtattggg gatagacaat cttgtctttg tggcgatttt
     7981 ggcaaacaag gtccagcccg cacggcgcga ccgcgcacgg attatcgggc tggggctggc
     8041 agtcgtcatc cgcatcatta tgcttgcttt tatggcgcac atcatcacgc tgaccgagcc
     8101 gctgttccaa atcggcggcc tcgccgtttc cggcaaggac atgattatgc tcgcgggcgg
     8161 tattttcctg ctttacaaag ccaccaccga actgcatgaa cgcctcgaag ggcacaaccg
     8221 ttttaccgtt gccgacaacc aaaaaaaaca cgcgccgttt tggggcgtgg tcgcgcaaat
     8281 cctgatactg gatgccgtgt tttccatcga ttcggtcatt actgcggtgg cgatggtcga
     8341 tcatatcgtc gtggcgatgg gtgcggtcgt cgtcgcgatg gcggtgatga tttccgccag
     8401 caaactcttg accgaatttg tagacagaca ccctaccgtc gtgatgctct gccttggttt
     8461 tttgttgatg atcggtttca gcctgattgc cgaagccttc catttccaca ttcccaaagg
     8521 ctacctctac gccgccatcg gcttctcgat tttaatcgaa ctgtttaacc agatttccca
     8581 gcgcaacagc cgcaaaaacg actacatcgg cagctcgtgg cgcaagcgca ccgccgaaaa
     8641 cgttttgggt atgatgggca tacgcgaaag cgtgcttgcc gatgcgggcg gcgaatccgg
     8701 ggacgacgcg cattttgaag aaaacgaaaa atcgatgata cgcagcgtgc tgacgcttgc
     8761 cgaacgcccg attatggggg tgatgatccc acgccgcgac atcgaacggc tggacatttc
     8821 ccaaagccgc gaagaacagt gtgcccaact gcaaaacacg ccttacagcc gcctgctcgt
     8881 tgtcggtaag gcgggcgtgg acgaaccttt gggctacatc aacaaaaaag acctgctgtc
     8941 ccaactgctg gaaacaggcg gtctcgacat tcagacggca ttgcgccagc cactcgtcct
     9001 gcccgacagc accaccgcgc tgggcgcaat cgaactcttc cgccaaagca gcgcggatta
     9061 tgctttggtg gtggacgagt tcggcgcggt attgggcatg gtaaccatga aagacctgct
     9121 cgaaaccatc gcaggcgagt tccccgaaga atttgagcgc gaagaagaac cagccgttca
     9181 ggggaatccc gatgaaagcc tgacggtgga aggcgcgttg gaatatgtgg aactcgcacc
     9241 gcaactcaac ctgccgcagc aggaggaaga tgccgatttc catacggttg ccgggctgat
     9301 tatggaagaa ttgcaaacca tccccgatgt cggcgatttt gccgatttcc acggctggcg
     9361 gtttgaagtg gtcgaaaaag aagggcagcg catcgagcgg gtcaaaatca ccaaattgcc
     9421 cgaagaataa gcattcagga tagaaaatga acgttttgat ttccaacgac gacggctacc
     9481 tctccgaagg tattgccgtt ttggcgcgcg ttacggcgga atttgccaac gtcagggtgg
     9541 ttgcgcccga acgcgacagg agcggggtca gcaattcgct gacgctggaa cgccctttgc
     9601 agttgaaaca ggcgcaaaac gggttctact atgtcaacgg cacgccgacc gactgtatcc
     9661 acatcgggca gtctgtattt tcggattttc aggccgattt tgtcttttcg ggcatcaacc
     9721 ggggcgcgaa tatgggggac gacacgcttt attcggggac ggttgcggcg gcaaccgaag
     9781 cctaccttat gggcataccc gctgtggcgt tttccttaaa cgacgcttcc ggacgctatt
     9841 gggcaaccgc agaaaaggca ctgtggacat tgttggcgca ttttttcaaa aaccccccgc
     9901 agtcccctat tttgtggaac atcaatatcc ccgccgtcga gccggaagat gtgcggggca
     9961 ttaaaatcgc ccgtttgggc aggaggcatc acggtcagaa cgtcatcccc gcgcgcaatc
    10021 cgcgcggcga acagatttat tggataggcc cggtaggcag ggtttccgac aaagaagagg
    10081 gaacggattt cggtgaatgc ggcgcaggtt tcattaccgt aacgccgctg caaatcgacc
    10141 tgaccgccta tccggacatg gcggaaacag cggcgttctg gcatgcggac tgaccgtttc
    10201 at
//
LOCUS       DAWGKF010000063         9985 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.063, whole genome shotgun sequence.
ACCESSION   DAWGKF010000063 DAWGKF010000000
VERSION     DAWGKF010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9985)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9985)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9985
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.063"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            50..289
                     /locus_tag="WHR07_001103"
     CDS             50..289
                     /locus_tag="WHR07_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130321.1"
                     /translation="MNVWDIWGRMVEIYHKYKKPCLVLAVDFVMGMVFIEPNEEPCIG
                     RCYAPMSESPDFANAVAMAVAMICIVWIAVLSMTD"
     gene            503..1804
                     /gene="bioA"
                     /locus_tag="WHR07_001104"
     CDS             503..1804
                     /gene="bioA"
                     /locus_tag="WHR07_001104"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HEZ2130322.1"
                     /translation="MPSEHQHTSSLLDFDRTHLLHPYTSMTDPLPVYPVKRAEGVFIE
                     LADGTRLVDGMSSWWCAIHGYNHPVLNQAVETQIKQMSHVMFGGLTHEPAVELGKLLV
                     GILPQGLDRIFYADSGSVSVEVALKMAVQYRQVRGLTAKQNIATVRRGYHGDTWNAMS
                     VCDPETGMHHIFGSALPQRYFVDNPTSRFDDEWDEADLQPVRALFEVHHADIAAFILE
                     PVVQGAGGMYFYHPQYLRGLRDLCDEFDIVLIFDEIATGFGRTGKMFACEHAEVVPDI
                     MCIGKGLSGGYMTLAAAITSQKVTETISRGEAGVFMHGPTFMANPLACAVACASVKLL
                     LSQDWQANIRRIESILKGRLKAAWDIRGVKDVRVLGAIGVIELDKGVDMARFQADCVA
                     QGIWVRPFGRLVYLMPPYIISDGVLTKLADKTVQILKEHSK"
     gene            1801..2448
                     /gene="bioD"
                     /locus_tag="WHR07_001105"
     CDS             1801..2448
                     /gene="bioD"
                     /locus_tag="WHR07_001105"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HEZ2130323.1"
                     /translation="MKGVYFVSGIDTDIGKTVATGMLAKQLLQQGKSVITQKPVQTGC
                     QDIAEDIAVHRKIMGIPMQEADKRRLTMPEIFSYPASPHLAARLDGRALDLDKIRTAT
                     QELAAQYEIVLVEGAGGLMVPLTEKLLTIDYIQQQAYPVILVTSGRLGSINHTLLSFA
                     ALKQYGIRLHSLVFNHIHDSRDAHIAQYSLSYLKCRLKADFSEAEWMELAKTDAV"
     gene            2463..2939
                     /locus_tag="WHR07_001106"
     CDS             2463..2939
                     /locus_tag="WHR07_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HEZ2130324.1"
                     /translation="MEHLFGKWLPDLPAAVSDGIDLPMSRLLKARSLTAALRALPHTF
                     SVELLKLGELETECGGRLVREVLLKLDRIPVVEARSECRIGSAFWQNILDCGTRPLGE
                     RLFQADLEGARSAFEFAVSGEGCGRYFAARRSRFSRHGEEMLLTEYFLPELKRFIG"
     gene            2969..3859
                     /gene="ubiA"
                     /locus_tag="WHR07_001107"
     CDS             2969..3859
                     /gene="ubiA"
                     /locus_tag="WHR07_001107"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HEZ2130325.1"
                     /translation="MNPKSPLFLRLSDRLDVYLRLMRADKPIGTLLLLWPTYWALWLA
                     SDGIPDLAVLAAFTIGTFLMRSAGCVINDFADRDFDGAVERTKNRPFAQGRVKKKEAL
                     LLTAFLCLLAALCLIPLNHLTWLMSLPALFLALTYPFTKRFFPIPQLYLGLAFSFGIP
                     MAFAAVGNSVPVEAWILFTANVLWTLAYDTVYAMADKEDDLKIGIKTSAVTFGRYDIA
                     AVMLCHGGFTLLMAVLGAVIGAAWAYWTAIPIVLLLQYRQYAAIKSRVRQICFETFLA
                     NNRIGWVWFTAIFAHTFFAK"
     gene            4044..4493
                     /gene="ptsN"
                     /locus_tag="WHR07_001108"
     CDS             4044..4493
                     /gene="ptsN"
                     /locus_tag="WHR07_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HEZ2130326.1"
                     /translation="MSLIGEILPLSHIVLDMEVGSKKRLFEEAGLLLERESSLSHADV
                     FECLFAREKLGSTGLGQGVAIPHGRHAGVKQATGAFIRTREPVGFDAPDGKPVSLVFI
                     LLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVSSAEEARAILTEE"
     gene            4497..5459
                     /locus_tag="WHR07_001109"
     CDS             4497..5459
                     /locus_tag="WHR07_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphorylase"
                     /protein_id="HEZ2130327.1"
                     /translation="MPSISVRRLFDDNQYKLQLAWAAGNSGADNRIGVEADKPVLALV
                     GHLNFIHPNQIQVVGLAESEYLNRLESGETGYQFGNLFDISMSLVIVANGLPVSPGLR
                     DYCHKNDIPLLTSKLESPYLMDVLRIYLQRTLAASSVKHGVFLDVFEIGVLITGHSGL
                     GKSELALELISRGHSLIADDAVELFRIGPETLEGRCSPMLRDFLEVRGLGILNIRHIF
                     GETSIRPKKILQLIINLVEADDEYMKQLDRLSIRTETESILNVNVRSVTLPVAVGRNL
                     AVLVEAAVRNYILQLRGKDSTREFLERHQTQLKENEQNHENRPD"
     gene            5440..6294
                     /gene="rapZ"
                     /locus_tag="WHR07_001110"
     CDS             5440..6294
                     /gene="rapZ"
                     /locus_tag="WHR07_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HEZ2130328.1"
                     /translation="MKIVLISGLSGSGKSVALRQMEDSGYFCVDNLPLEMLPALVSYH
                     IERADETELAVSVDVRSGIDIGQAREQIASLRGLGHRVEVLFVEAEEAVLVRRFSETR
                     RGHPLSNQDMTLLESLKKEREWLFPLKEIAYCIDTSKMNAQQLRHAVRQWLKVERTGL
                     LVILESFGFKYGVPNNADFMFDMRSLPNPYYDPELRPYTGMDKPVWDYLDGQPLVQEM
                     VDDIERFVTHWLPRLEDESRSYVTVAIGCTGGQHRSVYVVEKLARRLKGRYELLIRHR
                     QAQNLSDR"
     gene            6375..7316
                     /gene="ylqF"
                     /locus_tag="WHR07_001111"
     CDS             6375..7316
                     /gene="ylqF"
                     /locus_tag="WHR07_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HEZ2130329.1"
                     /translation="MAIQWFPGHMNKAKKAIAERAKSVDMVIEMLDARMPASSENPLL
                     AQLSKGKPKLKILNKQDLADPERTKVWLDHYNSRPDTRAIALDSSETGAHGKITQACR
                     AMIPHRQGIDKPLRVLICGIPNVGKSTLINGMIGKKSAKTGNEPGITKAEQRLFLADD
                     FWLYDTPGMLWPKIIVEEGGYNLAAGGAVGRNALDEEEVALELLDYLRRHYLPMLQER
                     YQADKDPSSHWDENVWLEWIAKKRGAVLSGGRINYQKAAENILTDFREGKIGRITLET
                     PNQWETWLKKARQKEAELKAIREARKAERKGQKPSEA"
     gene            7417..8019
                     /locus_tag="WHR07_001112"
     CDS             7417..8019
                     /locus_tag="WHR07_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HEZ2130330.1"
                     /translation="MTDKISPDALIEAALLTQTEPLTEKSMRELCVPPLSQDKLIDVL
                     AQLKTRWQDRALQLVHTQEGWRFQIVQTAFERLGSLQEQRAPRYSRAVMETLAIIAYQ
                     QPVTRGDIEGIRGVAVSQNVMQTLQDRGWIEVIGHRDTLGKPALWATTATFLSDLRLD
                     GLEELPPLTELGELVLPDLMEMPPTDEEEPEAVPSDTLPN"
     gene            8204..9877
                     /gene="recN"
                     /locus_tag="WHR07_001113"
     CDS             8204..9877
                     /gene="recN"
                     /locus_tag="WHR07_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HEZ2130331.1"
                     /translation="MLLTLSLRDFVIVENLNLDFQSGFTVLTGETGAGKSITLDAIGL
                     LLGDKADYSQVRSGAKEAQLSALFDISHLPVLKAELYEQGLLNDGEEELSIRRIIDAK
                     GKSRSFINNQAATLAQLKSVGSQLIDIHGQNAHHSLNQEAAQRELLDAFAGSREQAET
                     VRQLYQNWANAKKALQEAQEHADAVIIERERLEWQFNELNQLDIKQGEWEALSQSHDS
                     LAHSAELLQAAEEVGSKIDGDNGIQRHIYQCQKLLANLQNIEPRFAESLNMLASIEAE
                     LGEISANMRDVAGRSDINPNELAAQEQRMGELMGMARKYRIEPEELPAKLAEIEERLQ
                     SLQAAADLDALEHNVAHNFAEYQEAAHILSAMRHQAAERLSGETTEHMQHLAMKGARF
                     DIALLPSSPTSHGLEQVQFQVAANKGNPPRPLNKVASGGELARISLALQVVASQYTQV
                     PTLIFDEVDTGIGGGVAEMVGKALRALGRKHQVLAVTHLPQVASCGENHWRVRKHSEG
                     EQTVSEISILDEIQRVEEVARMLGGEVITDTTRQHAAELLQLASKNSLF"
BASE COUNT         2407 a         2532 c         2737 g         2309 t
ORIGIN      
        1 atagggctgt aaccttcaat cggaatttgt tgcctgcggg atatgcggta tgaatgtttg
       61 ggatatatgg ggcaggatgg tggaaatcta tcataagtat aagaagccgt gcctggtttt
      121 ggcggtggat tttgtgatgg gtatggtatt catagagccg aatgaggagc cgtgcatcgg
      181 cagatgctat gcgcctatgt cggagtcccc tgattttgcc aacgctgttg cgatggctgt
      241 tgctatgatc tgtatcgtat ggattgccgt tttgtctatg actgattgaa gcgttgggcg
      301 gaggctgcgt gaaacggtat tgggcgttgg gccgtctgat tccaatcggg cttgaggaat
      361 gcgaaacggt gtgcgcttat gttgcggaac gatttgtttc gcggttttgc gcccgaaacg
      421 gatggagagg tgtgggaaac ggtctgtcgg agtagaatac gcgtttgcgt ttgaatgcag
      481 caataagaaa agagagaaac ttatgccgtc tgaacatcaa cacacatcat cattacttga
      541 tttcgaccgt acccatctgc tccatcccta tacttccatg accgatccgc ttcccgttta
      601 tcctgtcaaa cgtgcagaag gggtgtttat cgaattggcg gacggcacgc ggctggttga
      661 cgggatgtcg tcctggtggt gtgcgataca cggttacaat catcctgttt tgaatcaggc
      721 ggttgagacg cagattaaac aaatgtcgca tgtgatgttc ggcggtttga cgcatgagcc
      781 tgcggtggag ctgggtaaat tgttggttgg gattttgccg caggggttgg accgtatttt
      841 ttatgcggat tcaggttcgg tttcggtgga agttgcgttg aaaatggcgg tgcaataccg
      901 gcaggtgcgg gggttgacgg cgaagcagaa tattgcgacg gtgcggcgcg ggtatcacgg
      961 cgatacttgg aacgcgatgt ccgtctgcga tccggaaacg gggatgcacc atattttcgg
     1021 cagcgcgttg ccgcagcgtt attttgtcga taacccgaca agccgtttcg acgatgaatg
     1081 ggacgaggcg gatttgcagc ctgtccgcgc cttgtttgaa gtgcatcatg cggatattgc
     1141 cgcctttatt ttagagccgg tcgtgcaggg cgcgggcggc atgtattttt atcatccgca
     1201 gtatcttcgc ggattgcgcg atttgtgcga cgagtttgat atcgttttga tttttgatga
     1261 aatcgccacc ggattcgggc gcacgggcaa gatgtttgcc tgcgaacacg cggaggtcgt
     1321 gccggatatt atgtgcatcg gcaagggttt gagcggcggc tatatgacgc tggcggcagc
     1381 aatcacttcg caaaaagtta ccgaaacgat ttcgcgcggc gaagcgggcg tgtttatgca
     1441 cggcccgacg tttatggcaa acccgctggc gtgtgccgtt gcctgcgctt cggtcaaact
     1501 gcttttgtct caagactggc aggcaaatat ccgccgcatt gaaagcatct taaaaggccg
     1561 tctgaaagcc gcgtgggaca ttcgcggcgt gaaagacgta cgcgttttgg gtgccatcgg
     1621 cgtgatcgag ctggataaag gcgtggatat ggcgcgtttt caagcagatt gcgtggcgca
     1681 gggcatttgg gtgcgcccgt tcggcaggct ggtatatctg atgccgccgt atattatttc
     1741 agacggcgtt ttgaccaaac ttgccgacaa aaccgtgcaa atcttgaagg aacacagcaa
     1801 atgaaaggcg tttacttcgt cagcggcata gacacggaca tcggcaaaac tgtcgccacc
     1861 ggtatgttgg caaaacaatt gttgcagcag ggcaaaagcg tgattacgca aaagcccgtg
     1921 caaaccggtt gccaagacat cgccgaagac atcgccgttc accgcaaaat catgggcata
     1981 cccatgcagg aagccgacaa acggcggctg actatgcctg aaatcttcag ctatcccgcc
     2041 tcgccccatc tcgccgcccg tctggacggc agggctttgg acttggacaa aatccgtacc
     2101 gctacgcaag aattggcggc acaatacgaa atagtcttgg tcgaaggcgc gggcggtttg
     2161 atggttccgc tgacggaaaa gctgttaacc attgattata ttcagcaaca ggcttatccc
     2221 gtcatcctcg ttaccagcgg tcggctcggc agcattaatc acaccctgct cagtttcgcc
     2281 gcgctcaaac aatacggcat tcgcttgcac agcctcgtat tcaaccatat tcatgacagc
     2341 cgcgacgcac acatcgccca atacagcctg agctacttga aatgccgtct gaaagccgat
     2401 ttttccgaag cggaatggat ggagttggca aaaacagacg cggtataaag attgggaaaa
     2461 atatggaaca cctatttggg aaatggctgc ccgacttgcc cgccgccgtt tcagacggca
     2521 tcgacctgcc gatgagccgg ttattgaaag cccggtcgct gaccgccgca ttgcgcgcct
     2581 tgccgcatac attttcggtg gaactgctga aactgggcga attggagacg gaatgcggag
     2641 ggaggctggt gcgcgaagtt ttgttgaagc tggaccgtat ccctgttgtt gaggcaagga
     2701 gcgaatgccg gataggttcg gcgttttggc aaaacatttt ggactgcggc acgcgccctt
     2761 tgggcgagcg tctgtttcaa gccgatttgg aaggggcgcg ttcggcgttt gagtttgccg
     2821 tttccggcga aggatgcgga cggtactttg ccgcgcggcg ttctcggttt tcccgtcacg
     2881 gcgaggaaat gctgctgacc gagtattttc tgcccgaact gaaacgcttt atcggataaa
     2941 ataccgtttt ttcaagctgt gcggcaatat gaatcctaaa tcccctttat ttttacgact
     3001 gtccgatcgt ttggatgtgt acctgcgcct gatgcgggcg gacaagccca ttgggacgct
     3061 gcttttactg tggccgacct actgggcatt gtggctggct tcagacggca ttcccgattt
     3121 ggcggtattg gcggcgttta caatcggtac gtttttaatg cgcagtgccg gttgcgtcat
     3181 caacgatttt gccgaccgcg attttgacgg tgctgtcgag cgcaccaaaa accgtccgtt
     3241 cgcacagggc agggtcaaga aaaaagaagc cctgctgctg acggcatttt tgtgcctgct
     3301 tgccgcattg tgcctgattc cgctgaatca tctgacttgg ctgatgagcc tgcccgccct
     3361 gtttcttgcg ctgacttacc cgtttaccaa acgttttttt ccgattcccc aactctatct
     3421 cgggcttgcc ttttccttcg gtatcccgat ggcgtttgcc gcagtgggca acagcgtccc
     3481 cgttgaagca tggatacttt ttaccgccaa tgttttatgg acactggctt acgacactgt
     3541 ttacgccatg gcggacaaag aggacgattt gaaaatcggc atcaaaacct ccgccgtcac
     3601 gttcgggcgt tacgacatcg ccgccgttat gctgtgtcat ggcggcttta ccctgctgat
     3661 ggcagtattg ggggcggtta tcggtgcggc atgggcatat tggacggcaa tccccatcgt
     3721 cctgctgctg caataccgcc aatatgccgc catcaaaagc cgcgtccggc aaatctgttt
     3781 tgaaacgttt ttggcaaaca acagaattgg ttgggtgtgg tttaccgcca tttttgccca
     3841 tacgtttttc gcgaaataag gcagggcaat gccgtctgaa gagccgtaaa ctgctttgga
     3901 cggcatttct atctgtgccg aaaagcgtta aaatatgttt ttaaaacgct gtgttatgtc
     3961 agcccgtacc gtatgcggga ttgagatttg ccccggcagt cggtacaatc tttctgtttt
     4021 gcgatgtctg aaaagagaag cttatgagcc ttatcggcga aattttgcct ttgtcccata
     4081 ttgttttgga tatggaggtg ggcagtaaaa aaaggctgtt tgaggaagcg ggcctgcttt
     4141 tggaacgcga atcctcattg tcccatgctg atgttttcga atgtcttttt gcccgtgaaa
     4201 aactcggttc gaccggtttg gggcagggcg ttgccatccc gcacggccgt catgccggcg
     4261 tgaagcaggc gacgggcgcg ttcatccgca cgcgcgaacc cgtcggattt gacgcaccgg
     4321 acggcaaacc ggtttccctg gtttttatct tgctggttcc ggaaaatgcg acgggtgagc
     4381 atttggaggt attgtccaaa ctggccggca agttttccca aaaaagcatc cgcgaatcgc
     4441 tgatgacggt ttcttctgcg gaagaagccc gcgccatcct gaccgaagaa taaaatatgc
     4501 ccagtatctc tgtccgccga ctgtttgacg acaaccaata caaactgcaa ctcgcctggg
     4561 ccgccggcaa ttcgggtgcg gacaaccgta tcggcgtaga ggcggacaag cccgtcctcg
     4621 ctttggtcgg acacctgaat ttcatccacc ccaaccaaat ccaagtggtc ggtttggcgg
     4681 agtcggaata tctgaaccgc ctcgaatcgg gggaaacggg ttatcagttc ggaaacctgt
     4741 tcgacatttc tatgtctttg gtcattgtgg caaacggctt gccggtttcc ccgggactgc
     4801 gcgactactg ccacaaaaac gatattccac tgctgacttc caaactcgaa agcccctatc
     4861 tgatggacgt gttgcggatt tacctgcaac gcaccctggc ggcatcgtcc gtcaaacacg
     4921 gcgtatttct cgatgtgttt gaaatcggcg tgctgattac cggacattcg ggtttgggta
     4981 agagcgaatt ggcgttggag ctgatttcgc gcggccacag cctgattgcc gacgatgcgg
     5041 tcgagctgtt ccgcatcggc ccggaaacgc tggaagggcg gtgttcgcct atgctgcgcg
     5101 attttttgga agtgcgcggc ttggggatac tcaatatccg ccatattttc ggcgaaactt
     5161 ccatccgccc caaaaaaatc ctgcaactca ttatcaattt ggtcgaggcg gacgacgagt
     5221 atatgaagca gctcgaccgt ttgagtatcc gtaccgaaac cgaatccatc ctcaacgtca
     5281 acgtccgttc ggtaacgctg cctgtcgcgg tcggacgcaa ccttgccgta ttggttgaag
     5341 cggcggtgcg caattatatt cttcagttgc gcggtaagga tagtacgcgc gaatttttgg
     5401 aacgccatca gacgcagctt aaagaaaacg aacagaatca tgaaaatcgt cctgattagc
     5461 gggttgtccg gttcgggcaa atccgtcgca ctgcgccaaa tggaagattc gggttatttc
     5521 tgcgtggaca acctgccctt ggaaatgttg cccgcgctgg tgtcgtatca tatcgagcgt
     5581 gcggacgaaa ccgaattggc ggtcagcgtc gatgtgcgtt ccggcataga catcggacag
     5641 gcgcgggaac agattgcctc tctgcgcgga ctggggcaca gggttgaagt tttgtttgtc
     5701 gaggcggaag aggccgtgct ggtccgccgg ttttccgaaa ccaggcgagg ccaccctctg
     5761 agtaatcagg atatgacctt gttggaaagc ttaaagaaag aacgggaatg gctgttcccg
     5821 cttaaagaaa tcgcctattg tatcgacact tccaagatga atgcccaaca gctccgccat
     5881 gcagtccggc agtggctgaa ggtcgaacgt accgggctgc tggtgatttt ggagtccttc
     5941 gggttcaaat acggtgtgcc aaacaacgcg gattttatgt tcgatatgcg cagtctgccc
     6001 aacccgtatt acgatcccga gttgaggcct tacaccggta tggacaagcc cgtttgggat
     6061 tatttggacg gacagccgct tgtgcaggaa atggttgacg acatcgaaag gtttgttacg
     6121 cattggctgc cgcgtttgga ggatgaaagc aggagctacg ttaccgtcgc catcggctgt
     6181 accggcgggc agcaccgttc cgtctatgtt gtcgaaaaac tcgcccgaag gttgaaaggg
     6241 cgttatgaat tgctgatacg gcacagacag gcgcaaaacc tgtcagaccg ctaattccgt
     6301 caaaccatta tgccgtctga aaccccgtcc tccgtttcag acggcatttc aaatattgaa
     6361 aagaaagaac agacatggca atccaatggt ttcccggcca tatgaacaag gcgaaaaaag
     6421 ccatcgccga gcgtgcaaaa agcgttgata tggtgattga aatgctggac gcgcgtatgc
     6481 ccgcctccag cgaaaacccc ctgcttgccc agctttccaa aggcaaaccc aaacttaaaa
     6541 tcctaaacaa acaagatctt gccgaccccg aacgcacaaa ggtctggctt gaccactaca
     6601 acagccgccc cgacacgcgc gccattgccc tcgattcctc cgaaaccggc gcacacggca
     6661 aaatcaccca agcctgccgc gcgatgattc cccaccggca aggcatagac aaacccttgc
     6721 gcgtcttgat ttgcggcatt cccaacgtcg gcaaatccac cctcatcaac ggcatgatag
     6781 gcaaaaaatc cgccaaaacc ggcaacgaac ccggcatcac caaagccgaa caacgccttt
     6841 tccttgccga cgacttctgg ctctacgaca cccccggaat gctgtggccg aaaatcatcg
     6901 tcgaagaagg cggctacaac cttgccgccg gcggcgcagt cggacgcaac gcgttggacg
     6961 aagaagaagt cgccctcgaa cttttagact acctccgccg ccactacctc cctatgttgc
     7021 aagaacgcta ccaagccgac aaagacccca gcagccactg ggacgaaaac gtttggctcg
     7081 aatggatagc caaaaaacgc ggcgcagtcc tcagcggcgg acggatcaac taccaaaaag
     7141 ccgccgaaaa catcctcacc gacttccgtg aaggcaaaat cggcagaatc accctcgaaa
     7201 cgccgaacca atgggaaact tggctcaaaa aagcccgtca gaaagaagcc gaactcaaag
     7261 ccatacgcga agccagaaaa gcagagcgta aagggcagaa gccttcggaa gcataaagaa
     7321 tgccgtctga aaaatatttt tcaggcagct tctctctact ccaaccgatt tcagacggca
     7381 tatccaaacc catgccgttt cagcacggat acccgtatga ccgacaaaat ttctcccgac
     7441 gcactaattg aagccgcact gctgacccaa accgaaccgc tgaccgaaaa atctatgcgc
     7501 gaattgtgtg tgccgccact gtcgcaggac aaactgattg atgtgttggc gcagttgaaa
     7561 acgcgttggc aggatagggc gttgcaactg gtgcatacgc aagagggctg gcgttttcag
     7621 attgttcaga cggcattcga gcggctgggc agcctgcaag aacagcgtgc gccgcgttac
     7681 tcccgcgccg tgatggaaac actggcgatt atcgcctacc agcagcccgt aacgcgcggc
     7741 gacatcgagg gcatacgcgg cgtggcggtg tcgcagaacg tgatgcagac cttgcaggat
     7801 cgggggtgga ttgaagtcat cggacatcgg gacacattgg gaaaacccgc attgtgggcg
     7861 acaacggcaa cttttctcag cgatttgcgc ttggacggtc tggaagaact tccgccgctg
     7921 accgaactgg gcgaactggt tttacccgat ttaatggaaa tgccgcctac ggatgaagaa
     7981 gagccggaag ccgtaccgtc cgataccctg cccaactgaa attccaaatg ccgtctgaaa
     8041 cgcacattgc ttcagacggc attgcaacaa ataagcagat aaaaacaagt actaagcaaa
     8101 attaaggaaa acttattttt aatttaaaaa aaatcttagt tataattcgt atatctaaag
     8161 ttgatattgc ttttgtcggt agaattgcta aggaatcctc acaatgcttc taacactttc
     8221 tttgcgtgat tttgtcattg ttgaaaatct gaatctggat tttcaaagcg gctttaccgt
     8281 attgaccgga gaaaccggcg cgggcaagtc cattactttg gatgcgattg gtctgctgtt
     8341 gggcgacaaa gccgattaca gccaagtccg cagcggtgca aaagaagcgc agttgtcggc
     8401 attgttcgat atttcccatt tgcctgtttt aaaagcagaa ttgtatgaac aggggctttt
     8461 aaacgacgga gaagaagaac tcagtatccg ccgcattatc gatgccaaag gcaaaagccg
     8521 cagctttatc aacaatcagg ccgctacctt ggcgcaactc aaatccgtcg gtagccagct
     8581 tatcgacatc cacgggcaaa acgcccatca ttcgcttaat caggaagccg cccagcgcga
     8641 attgttggac gcatttgcgg gtagcaggga gcaggcggaa accgtcaggc agctttatca
     8701 aaattgggcc aatgcgaaaa aagccctcca agaggcgcag gaacacgccg atgccgtcat
     8761 tatcgagcgg gagcgtctgg aatggcagtt taacgaactg aatcagttgg acattaaaca
     8821 aggcgaatgg gaagccctca gccaaagcca cgacagcctt gcccattctg ccgagctgtt
     8881 gcaggctgcc gaagaagtcg gaagcaagat tgacggcgac aacggcatcc aacgccatat
     8941 ctatcaatgt caaaaactat tggccaatct gcaaaacatc gagccgcgct ttgccgagag
     9001 cctgaatatg ttggcaagca tcgaagccga attgggcgaa atcagtgcca atatgcgcga
     9061 tgtggcaggt cgcagcgaca tcaatcccaa tgaattggcg gcacaggaac agcgcatggg
     9121 cgagctgatg gggatggcgc ggaaataccg gatcgagcct gaagagttgc ctgccaagtt
     9181 ggcagaaatc gaagaacgcc tgcaaagcct gcaagctgcc gccgatttgg acgcgctcga
     9241 gcataatgtt gcccacaatt ttgccgaata tcaggaagct gcccacatcc tttctgccat
     9301 gcgccatcag gcggcagagc gtttgagcgg cgaaacgacc gagcatatgc aacaccttgc
     9361 catgaaaggt gcgcgttttg acattgccct actgccgtct tccccgacgt cgcacggctt
     9421 ggagcaagta cagtttcaag ttgccgccaa caaaggcaat ccgccccgtc cgctgaataa
     9481 agttgcctcc ggcggcgaat tggcgcgtat cagccttgcc ttacaggttg ttgccagcca
     9541 atatacccaa gttcccaccc tgatttttga tgaggtcgat accggtattg gagggggagt
     9601 ggctgaaatg gtcggcaagg cattacgtgc gttgggcaga aaacatcagg tgcttgccgt
     9661 tacccatctt ccgcaagtcg catcctgcgg cgaaaaccac tggcgggtgc gcaagcacag
     9721 cgagggagag caaaccgtca gcgaaatcag tatattggat gaaatccaac gggtcgaaga
     9781 ggttgcccgt atgttgggcg gagaagtcat taccgatacg acgcggcaac atgcggcaga
     9841 attgctgcaa cttgcgtcga aaaatagttt attttaaaat caatcagtta aaaaataact
     9901 aaaaataaaa gtctaaaaca atagacagaa ctcagataaa tccgtattat cacgctttct
     9961 taatcacttg aacaagtgat tgtgc
//
LOCUS       DAWGKF010000064         9982 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.064, whole genome shotgun sequence.
ACCESSION   DAWGKF010000064 DAWGKF010000000
VERSION     DAWGKF010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9982)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9982)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9982
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.064"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(129..464)
                     /locus_tag="WHR07_001114"
     CDS             complement(129..464)
                     /locus_tag="WHR07_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEZ2130332.1"
                     /translation="MFKDWKEHTALVKKSFGELGKAHPKMLQAYGALEQAAAAEALDA
                     KTRELIAIAVAITTRCESCISVHAAAAAKAGATDSEIAGALATAIALNAGAAYTYALR
                     ALEAVETQK"
     gene            593..1498
                     /gene="mtrA"
                     /locus_tag="WHR07_001115"
     CDS             593..1498
                     /gene="mtrA"
                     /locus_tag="WHR07_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter MtrCDE transcriptional
                     activator MtrA"
                     /protein_id="HEZ2130333.1"
                     /translation="MDILDKLVDFAQLTGSVDVQCLLGGQWSVRHETLQREGLVHIVT
                     SGSGYLCIDGETSPRPVSTGDIVFFPRGLGHVLSHDGKCGESLQPDMRQHGAFTVKQC
                     GNGQDMSLFCARFRYDTHADLMNGLPETVFLNIAHPSLQYVVSMLQLESKKPLTGTVS
                     VVNALSSVLLVLILRAYLEQDKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNVDKM
                     VAAANMSRAQLMRRFKSRVGLSPHAFVNHIRLQKGALLLKKNPDSVLSVALSVGFQSE
                     THFGKAFKRQYHVSPGQYRKEGGQK"
     gene            complement(1560..2048)
                     /locus_tag="WHR07_001116"
     CDS             complement(1560..2048)
                     /locus_tag="WHR07_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HEZ2130334.1"
                     /translation="MKKYLIPLSIVAVLSGCQSIYVPTLTEIPVNPINTVKTEAPAKG
                     FRLASSHWTDVAKISDEATRLGYQVGIGKMTKVQAAQYLNNFRKRLVGRNAVDDSMYE
                     IYLRSAIDSQRGAINTEQSKLYIQNALRGWQQRWKNMDVKPNNPAFTNFLMEVMKMQP
                     LK"
     gene            2195..3097
                     /locus_tag="WHR07_001117"
     CDS             2195..3097
                     /locus_tag="WHR07_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ2130335.1"
                     /translation="MDTAKKDILGSGWMLVAAACFTIMNVLIKEASAKFALGSGELVF
                     WRMLFSTVALGAAAVLRRDTFRTPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTL
                     SYTSSIFLAVFSFLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGG
                     AMSGWAYLKVRELSLAGEPCWRVVFYLSVTGVAMSSVWATLTGWHTLSFPSAVYLSCI
                     GVSALIAQLSMTRAYKVGDKFTVASLSYMTVVFSALSAAFFLGEELFWQEILGMCIII
                     LSGILSSIRPTAFKQRLQSLFRQR"
     gene            complement(3138..4268)
                     /locus_tag="WHR07_001118"
     CDS             complement(3138..4268)
                     /locus_tag="WHR07_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ2130336.1"
                     /translation="MAKHLPLAVLTALLLAACGGSDKPPAEKPAPAENRNVLKIYNWS
                     EYVDPETVADFEKKNGIKVTYDVYDSDETLESKVLTGKSGYDIVAPSNAFVGRQIKAG
                     AYQKIDKSLIPNYKHLNPEMMRLMDGVDPGHEYAVPFYWGTNTFAINTERVKKALGTD
                     KLPDNQWDLVFDPEYTSKLKQCGISYLDSAAEIYPMVLNYLGKNPNSSNTEDIREATA
                     LLKKNRPNIKRFTSSGFIDDLARGDTCVTIGFGGDLNIAKRRAEEAGGKEKIRVMMPK
                     EGVGIWVDSFVIPKDAKNVANAHKYINDFLDPEVSAKNGNFVTYAPSSKPARELMEDE
                     FKNDNTIFPTEEDLKNSFIMVPIQPAALKFMVRQWQDVKAGK"
     gene            4473..7097
                     /gene="alaS"
                     /locus_tag="WHR07_001119"
     CDS             4473..7097
                     /gene="alaS"
                     /locus_tag="WHR07_001119"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEZ2130337.1"
                     /translation="MKTSELRQKFLKFFETKGHTVVRSSSLVPHDDPTLLFTNAGMNQ
                     FKDVFLGFDKRPYSRATTAQKCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFK
                     RDAIHFAWEFLTSPEWLNIPKDKLLATVYAEDDEAYNIWLNEIGMPSERIVRIGDNKG
                     AKYASDNFWQMGDTGPCGPCSEIFYDHGEEIWGGIPGSPEEDGDRWIEIWNCVFMQFN
                     RDEQGNMNPLPKPSVDTGMGLERMAAVMQHVHSNYEIDLFQDLLKAVARETGAAFSME
                     EPSLKVIADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRAVRHGYKLGQSKPFFHKLV
                     ADLVKEMGDAYPELKEKQVQIEEALKNEESRFAQTLETGMALLENALAKGSKKLDGEI
                     IFKLYDTYGFPYDLTADICRERNIELDEAGFEREMEAQRARARAAQSFKANAQLPYDG
                     QDTEFKGYSERQTESKVLALYKDGEQVDELNEGDSGAVVIDFTPFYAESGGQVGDVGY
                     IFSGENRFEVRDTQKIKAAVFGQFGVQTSGRLKVGDSVTAKVDDEIRNANMRNHSATH
                     LMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVTAEEIAEVERRVNEAVLANVAV
                     NAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQMGGFSTELCGGTHVSRTGDIGLFKIIS
                     EGGIAAGVRRIEAITGLNALKWAQEQERLVKDIIAETKAQTEKDVLAKIQAGAAHAKA
                     LEKELARAKAELAVHAGAKLLDDAKDLGAAKLVAAQIEADAAALREIVTDLTGKSDNA
                     VILLAAVNDGKVSLCAGVSKALTGKVKAGDLVKFAAEQVGGKGGGRPDLAQAGGTDAG
                     KLPAVLDSVKDWVGAKLV"
     gene            complement(7186..8208)
                     /locus_tag="WHR07_001120"
     CDS             complement(7186..8208)
                     /locus_tag="WHR07_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HEZ2130338.1"
                     /translation="MLTKKEFEKFLDEVCTVLRQEAKNAPFKSQDIFENRVRALCIAK
                     IPAYADIVINPEPVPQIFPDVPIGEYGVEVKFTLKDTWRSVANSIQEKNKADGVQHIY
                     VVFGKMGGIPDVKWQLYEDSVIHVRTSHVPRFEVEIESDRPSLFEGFGISYAEFADLD
                     MHEKMEYIRKYARNRLKEGERLWWIEDIDAVDSHDLPLEVRLYTSLPQEEKIRLRAEA
                     ALVSPRIVCSGRAKHKYDNAVLYLITYRGVLCHQARDLFSAGSVANSAEDYRGGNYVE
                     KSLKLIEHEIEKAALEMDDALIVEYWGESVPTEKRLEYWIKMLDDLADGWIPSESLFN
                     GRYKAK"
     gene            complement(8262..9413)
                     /locus_tag="WHR07_001121"
     CDS             complement(8262..9413)
                     /locus_tag="WHR07_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HEZ2130339.1"
                     /translation="MTEFARKNWNKLAGDAIKAKMHEHGIGFIQLSELFLEQGESETA
                     NAICNKVNRGTFSHAFYLKCMELMTKQEKQEDREKKYKIISLFSGCGGMDLGFLGGFE
                     FLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHGDIWQHLDEIPTSADIIIGGF
                     PCQDISINGKGAGISGSRSGLYKAMLSAVERVRPKIFVAENVKGLLMKHHRKDLETVL
                     SDFRNLGYQVDYYLLNAADYGVPQTRERVIIVGRLPEIPEIQIEKTNTSNSYVTARQA
                     IGDLVDKVEDEIANHIWSRAEKSPDQGSRKLDAERAGYTIRAECHGNIQWHYELPRRI
                     SMREAARIQSFPDNFIFQAKLRATERQIGNAVPPVLGWHIAAAVSKALK"
BASE COUNT         2470 a         2634 c         2373 g         2505 t
ORIGIN      
        1 cttacccctt gtttctcaaa tgccgtctga aaaaacggct gcatatgttg tctacaaaat
       61 atcgggaagc ataacaggca aaatgccgtc tgaaatattt tcagacggca tttcttatcc
      121 gaaacggatt atttttgcgt ttcaaccgct tccaatgcac gcagggcata agtgtaagcg
      181 gcaccggcat tcagggcgat ggcggttgcc aatgcgcctg cgatttcgct gtcggtcgca
      241 ccggctttgg cggcagcggc ggcgtgaacg ctgatgcagc tctcgcaacg agtggtaatg
      301 gcaacggcga tggcaatcag ttcgcgcgtt ttggcatcaa gtgcttcggc ggcggcggcc
      361 tgttccaatg cgccgtaggc ctgcagcatt ttaggatgcg ccttacccag ctcgccgaac
      421 gattttttaa ccaatgcggt atgttctttc caatctttaa acattttctt ttcctttctc
      481 ttgcgtttaa ccctgatacg cgcttgcgta tctgttttcg atgtgcgtat tattgcaatt
      541 attcagttgt gtttctcgtt taatcatctc attttatggt tcaaaaagat ttatggacat
      601 tctggacaaa ctggtcgatt tcgcccaatt gacgggcagt gtggatgtgc agtgcctttt
      661 gggcggacaa tggtcggtac ggcatgaaac cttgcaacgc gaaggattgg tacacattgt
      721 tacatcgggc agcggctatc tctgcatcga cggcgaaact tccccgcgtc cggtcagtac
      781 aggggatatt gtatttttcc cgcgcggctt gggtcatgtg ttgagccacg acggaaaatg
      841 cggagaaagt ttacaaccgg atatgcggca gcacggtgcg tttacggtca agcagtgcgg
      901 caacggacag gatatgagcc tgttttgcgc ccgtttccgc tacgacaccc acgccgattt
      961 gatgaacggg ctgcctgaaa ccgtttttct gaacattgcc catccgagtt tacagtatgt
     1021 ggtttcaatg ctgcaactgg aaagcaaaaa acctttgacg gggacggttt ccgtggtcaa
     1081 cgcattgtcg tctgtcctgc tggtgcttat cctgcgcgcc tatctcgaac aggataagga
     1141 tgtcgaactc tcgggcgtat tgaaaggttg gcaggacaaa cgtttgggac atttaatcca
     1201 aaaggtgata gacaaaccgg aagacgaatg gaatgtcgac aaaatggtgg cggctgccaa
     1261 tatgtcgcgc gcgcaactga tgcgccgttt caaaagccgg gtcggactca gcccgcacgc
     1321 ctttgtgaac catatccgcc tgcaaaaagg cgcgttgctg ctgaaaaaaa acccggattc
     1381 ggttttgtcg gtcgcactgt cggtaggctt tcagtcggaa acgcacttcg gcaaggcgtt
     1441 caaacggcaa tatcacgttt cgccgggtca ataccggaaa gaaggcgggc aaaaataaat
     1501 cggggcttca aacgcaaatg ccgtctgaaa aggctttcat acagcatttg cgtaccgcgt
     1561 catttcaagg gctgcatctt catcacttcc atcaaaaagt tggtaaatgc ggggttgttg
     1621 ggtttgacat ccatattttt ccaacgctgc tgccagccgc gcaaggcatt ctggatatac
     1681 agcttggact gttccgtatt gattgcgccc cgctggctgt ctatcgccga acgcaggtag
     1741 atttcataca tactgtcatc gacggcattg cgtccgacca ggcgttttct gaagttgttc
     1801 agatattgcg ccgcctgaac cttggtcatt ttaccgatac ccacctgata gcccaagcgc
     1861 gtcgcttcat cgctgatttt ggcaacatcc gtccaatgcg aagaggcaag gcggaaacct
     1921 tttgcaggtg cttccgtttt gacggtattg ataggattca cggggatttc cgtcaatgtg
     1981 ggcacataaa tagactggca gccggaaaga actgccacaa tggaaagagg gataaggtat
     2041 tttttcatgc ccccattata atcaagtttg ccttgagaaa acaaattgtt cggcaagaaa
     2101 aataaaattt cggcatcaga agcaggcaaa aacacattcc acaagccttg ccgcaaggtt
     2161 tacaatccga ccgtccttat cgcaacgacc gtttatggat accgcaaaaa aagacatttt
     2221 aggatcgggc tggatgctgg tggcggcggc ctgctttacc attatgaacg tattgattaa
     2281 agaggcatcg gcaaaatttg ccctcggcag cggcgaattg gtcttttggc gcatgctgtt
     2341 ttcaaccgtt gcgctcgggg ctgccgccgt attgcgtcgg gacaccttcc gcacgcccca
     2401 ttggaaaaac cacttaaacc gcagtatggt cgggactggg gcgatgctgc tgctgtttta
     2461 cgcggtaacg catctgcctt tggccaccgg cgttaccctg agttacacct cgtcgatttt
     2521 tttggcggta ttttccttcc tgattttgaa agaacggatt tccgtttaca cgcaggcggt
     2581 gctgctcctt ggttttgccg gcgtggtatt gctgcttaat ccctcgttcc gcagcggtca
     2641 ggaaacggcg gcactcgccg ggctggcggg cggcgcgatg tccggctggg cgtatttgaa
     2701 agtgcgcgaa ctgtctttgg cgggcgaacc ctgctggcgc gtcgtgtttt acctttccgt
     2761 gacaggtgtg gcgatgtcgt cggtttgggc gacgctgacc ggctggcaca ccctgtcctt
     2821 tccatcggca gtttatctgt catgcatcgg cgtgtccgcg ctgattgccc aactgtcgat
     2881 gacgcgcgcc tacaaagtcg gcgacaaatt cacggttgcc tcgctttcct atatgaccgt
     2941 cgttttttcc gccctgtctg ccgcattttt tctgggcgaa gagcttttct ggcaggaaat
     3001 actcggtatg tgcatcatca tcctcagcgg cattttgagc agcatccgcc ccactgcctt
     3061 caaacagcgg ctgcaatccc tgttccgcca aagataaaaa atgccgtccg aacatccttc
     3121 agacggcata tcgggcttta tttccccgcc ttcacatcct gccactggcg caccataaac
     3181 ttcaatgccg ccggctggat aggcaccatg ataaagctgt ttttcaaatc ctcctcggtt
     3241 gggaaaatcg tattgtcgtt tttaaattcg tcttccatca gctcacgcgc cggcttgctc
     3301 gaaggcgcat aagtaacgaa attgccgttt ttcgccgaca cttccgggtc gaggaagtcg
     3361 ttgatgtatt tgtgcgcgtt ggcgacgttt ttcgcatctt tcggaatcac gaaagaatcc
     3421 acccaaatcc ccacgccctc tttgggcatc atcacgcgga ttttttcctt gccgcccgct
     3481 tcttcggcac ggcgtttggc gatgttcaaa tcgccgccga aaccgattgt tacgcaggta
     3541 tcgccgcgcg ccaaatcatc gataaagccg gacgaagtaa agcgtttgat attggggcgg
     3601 tttttcttga gcagggcggt tgcctccctg atgtcttccg tattgctgct gttcgggttt
     3661 ttacccaaat agttcaacac cataggatag atttccgccg cgctgtctaa ataactgata
     3721 ccgcattgtt tgagtttgga cgtgtattcg gggtcgaaca ccaaatccca ctggttgtcc
     3781 ggcagcttgt ccgtacccaa agcctttttc acgcgttcgg tattgatggc gaaggtattt
     3841 gtcccccaat aaaacggcac ggcgtattcg tggccgggat cgaccccgtc catcagcctc
     3901 atcatttcgg gattgaggtg tttataattg ggaatcagcg atttatcgat tttctgatac
     3961 gcacctgcct taatctgcct gcccacaaac gcattggacg gcgcgacaat gtcgtaaccg
     4021 gattttccgg tcagcacctt gctttccagc gtttcatcgc tgtcgtacac atcataagta
     4081 accttgatgc cgtttttctt ttcaaaatcg gcaacggttt ccggatcgac gtattccgac
     4141 cagttgtaaa ttttcaatac gtttcggttt tccgccggcg ccggtttttc ggcaggcggt
     4201 ttgtccgaac cgccgcacgc tgcaagcagc aaagcagtca ggacggcgag tggcagatgt
     4261 ttggccatta tcattccttg catatcgggt tggagaaagc ggtcattata gccgatattg
     4321 gcaacagggc ttcagacggc attcaaaatc ccgccacacc cttccgaaaa ccgccgcttc
     4381 catagctaga aacagggatt tgcggtaaga taccgccgtt cgttttccct gcttttacca
     4441 tgacaagaca tttgagagac attgaaaaaa ttatgaaaac ctccgaactg cgccaaaaat
     4501 tcctaaaatt ttttgaaacc aaaggccaca ccgtcgtccg ctcttccagc ctcgtgccgc
     4561 acgacgaccc gaccctgctg tttaccaacg cgggcatgaa ccagtttaaa gacgtattct
     4621 taggtttcga caaacgcccg tacagccgcg ccaccaccgc gcaaaaatgc gtacgcgcag
     4681 gcggcaagca caacgacttg gaaaacgtcg gctacaccgc ccgccaccac accttctttg
     4741 aaatgatggg caacttctcc ttcggcgact acttcaagcg cgacgcgatc cacttcgctt
     4801 gggaatttct gacttccccc gaatggctca atatccccaa agacaaactg ttggcgaccg
     4861 tttacgcgga agacgacgaa gcctacaaca tctggttgaa cgaaatcggt atgccgtccg
     4921 agcgcatcgt ccgcatcggc gacaacaaag gcgcgaaata cgcgtccgac aacttctggc
     4981 aaatgggcga caccggccct tgcggcccct gctccgaaat tttctacgac cacggcgaag
     5041 aaatttgggg cggcattccc ggcagccccg aagaagacgg cgaccgctgg atcgaaattt
     5101 ggaactgcgt attcatgcag ttcaaccgcg acgaacaagg caatatgaat ccgctgccca
     5161 agccgtccgt cgataccggc atgggcttgg aacgcatggc cgccgttatg cagcatgttc
     5221 acagcaacta cgaaatcgac ttgttccaag acctgctcaa agccgttgcc cgcgaaaccg
     5281 gcgcagcttt cagcatggaa gaaccaagcc taaaagtcat cgccgaccac atccgctcct
     5341 gctcattcct gattgcagac ggcgtattgc cttccaacga aggccgcggc tacgtattgc
     5401 gccgcattat ccgccgcgcc gtgcgccacg gttacaaact gggtcaaagc aaaccgttct
     5461 tccacaaact ggtggccgat ttggtcaaag agatgggcga tgcctaccct gaattgaaag
     5521 aaaaacaagt tcaaatcgaa gaagcgttga aaaacgaaga aagccgtttt gcccaaactc
     5581 tggaaaccgg tatggctttg ttggaaaacg cgcttgccaa aggcagcaaa aaactcgacg
     5641 gcgaaatcat cttcaaactc tacgatacct acggtttccc atacgacttg actgccgaca
     5701 tctgccgcga acgcaatatc gaactggacg aagcaggctt cgagcgcgaa atggaagccc
     5761 aacgcgcacg cgcacgcgcc gcacaaagct tcaaagccaa cgcccaactg ccttatgacg
     5821 gtcaagacac cgagtttaaa ggttatagcg aacgccaaac cgaatccaaa gtcctcgccc
     5881 tctacaaaga cggcgagcaa gtcgacgaat tgaacgaagg cgacagcggc gcagtcgtca
     5941 tcgactttac cccgttctat gcagaatccg gcggccaagt cggcgatgtc ggctatatct
     6001 tctcaggcga aaaccgcttt gaagtacgcg atacccaaaa aatcaaagcg gccgtattcg
     6061 gtcaattcgg cgtacaaact tcaggccgtc tgaaagtcgg cgacagcgtt accgccaaag
     6121 tggacgacga aatccgcaat gccaatatgc gcaaccacag cgcaacccac ttgatgcaca
     6181 aagccctgcg cgatgtattg ggcagacacg tcgaacaaaa aggctctttg gttaccgccg
     6241 aatccacccg tttcgacatt tcccatcccc aagcggtaac tgccgaagaa atcgccgaag
     6301 tcgaacgccg cgtcaacgaa gccgttttgg cgaacgttgc cgtcaacgcc gccattatga
     6361 gcatggaaga cgcgcaaaaa accggcgcca tgatgctctt cggcgaaaaa tatggcgacg
     6421 aagtacgcgt attgcaaatg ggcggtttct ctaccgaatt gtgcggcggc acgcacgttt
     6481 cacgcaccgg cgacatcggc ctcttcaaaa tcatcagcga aggcggtatt gccgcaggcg
     6541 tgcgccgtat cgaagccatc accggcctga acgcactcaa atgggcgcaa gagcaagagc
     6601 gtttggtgaa agacatcatt gctgaaacca aagcccaaac cgaaaaagac gtactggcga
     6661 aaatccaagc aggcgcggca cacgccaaag cattggaaaa agaattggca cgcgccaaag
     6721 ccgaactcgc cgtccacgca ggcgcaaaac tcttggacga cgcaaaagac ttgggcgcag
     6781 ccaaactcgt tgccgcccaa atcgaagccg acgcagccgc cctgcgcgaa atcgtaaccg
     6841 acctgaccgg aaaatccgac aacgccgtga ttcttttagc ggcagtaaac gacggcaaag
     6901 tctccctgtg cgccggcgta tccaaagccc tgaccggcaa agtcaaagca ggcgatctgg
     6961 ttaaatttgc agccgaacaa gtcggcggca aaggaggcgg cagaccagat ttggcacagg
     7021 cagggggcac ggatgccggc aaattgcccg ccgtgttgga tagcgtgaaa gactgggtcg
     7081 gcgcgaagct ggtttgatgt gggaaaggca gcctgaaagg gattcaggct gccttttgtg
     7141 ttaaagatgc cgtctgaaag atattttcag acggcctctg tcagtttatt tggctttata
     7201 cctaccattg aatagcgatt cagaaggtat ccagccatct gccaaatcat ccaacatctt
     7261 aatccaatac tctaggcgtt tttctgtcgg gacgctttct ccccaatatt cgacaattag
     7321 agcatcatcc atttccaaag cagctttttc aatttcatgc tcaatcaatt ttaaagattt
     7381 ttctacatag tttccgccac ggtagtcttc cgccgagttg gcaacgctgc ccgcactgaa
     7441 taagtcccgc gcctgatgac aaagcacacc gcgataggta atcagataca ggacggcatt
     7501 atcgtatttg tgcttcgccc tgcctgagca gacaatacgg ggggagacta atgctgcttc
     7561 agctcggagg cggatttttt cttcctgcgg cagggaagtg taaaggcgca cttccaaagg
     7621 cagatcatgg ctgtctactg cgtcaatgtc ttctatccac cataaccgct cgccttcttt
     7681 cagcctgtta cgggcatatt ttcggatata ttccattttt tcatgcatat ccaaatcggc
     7741 aaattcagca taggaaatac cgaaaccctc aaacagagac ggtcgatcag attctatttc
     7801 tacctcaaag cgcggaacat gcgatgtgcg gacatgaatt acgctatctt cgtaaagttg
     7861 ccatttcaca tcgggaatgc cccccatttt tccgaatacc acatagatat gctgtacacc
     7921 gtcagctttg tttttctctt ggatactgtt tgctacgctg cgccaagtat cttttagcgt
     7981 gaatttgact tctacaccat attcccctat tggaacatcg gggaaaattt gcggcacagg
     8041 ttcaggattg ataactatgt cagcataagc gggaattttt gcaatgcaca gcgcacgaac
     8101 tctgttttca aaaatatctt gggatttgaa aggtgcgttt tttgcctctt gcctcaatac
     8161 ggtgcaaacc tcgtctaaaa acttctcaaa ctcctttttt gtcagcataa tgcattacca
     8221 cttaaaaata taaagtagta attttatctt atttaacagg gttatttaag tgccttacta
     8281 acggcggcgg cgatgtgcca ccctaaaaca ggagggacgg cgttgccaat ttgccgttct
     8341 gtggcacgca attttgcctg gaaaataaaa ttgtcgggaa acgattggat gcgcgccgcc
     8401 tcacgcatgg agatgcggcg gggtaattcg taatgccact gtatgtttcc atggcattct
     8461 gccctaatag tgtagcccgc cctttcggca tccaattttc gactaccttg atcggggctt
     8521 ttttctgctc tactccaaat atggttggca atttcgtctt ctactttgtc gaccaaatcg
     8581 cctatagcct gtctagctgt tacatagctg ttgctggtat ttgttttttc aatctgtatt
     8641 tcgggaattt caggtagcct tccaacgatg ataactcgct cccgagtctg tggaacaccg
     8701 taatcggctg cattcagcaa gtagtaatct acctgataac ccaaattgcg aaaatctgaa
     8761 agcactgttt ccaaatcttt ccgatgatgc ttcatcagta gccctttgac attttcagca
     8821 acaaatattt tggggcgaac gcgttcaaca gcagacaaca tggctttata cagcccgctg
     8881 cggctgcctg aaatacctgc acctttacca ttaatagaaa tatcctgaca aggaaagcca
     8941 ccgataatga tgtctgcgct agtgggtatt tcatccaaat gctgccaaat atcaccatgt
     9001 acaatgtgat ttcctaagtt gtggcggtag gttctaacag cgtgttcgtc gatttcgttc
     9061 gcccaaataa tatcaaaatc atgtttgtca taagtacggt ttaaaaactc aaagcccccc
     9121 agaaaaccca aatccattcc gccacaaccg ctaaataaag aaataatttt atattttttt
     9181 tcgcggtctt cttgcttttc ctgtttggtc attaactcca tacatttaag ataaaaagca
     9241 tgggaaaaag tacctctatt tactttgtta caaattgcat ttgccgtttc actttcccct
     9301 tgctccaaga ataattctga taattgtata aagccaattc catgctcatg cattttggct
     9361 tttatggcat ctccagctaa cttgttccaa ttttttcgtg caaattcggt catggttaat
     9421 ctttcagtca ttcataaatg acattatttt agcgtttttt ataatttaag ccaagattta
     9481 aaatctacct ttaggtttac aggccgtctg aaaacaaaaa tctcgttttc agacgacctt
     9541 tttccgctaa aatcccccta ccgtccaacc cgaaacaagg agaaccatca tgcaagttcc
     9601 tacttccgcc atcatcaacg gcgaatttgc cgacaaatac ggcaaacgcg gcagcaagcc
     9661 gtagccagca cccctgtcaa ccgcgtgcgt ggctagacca cacaccctac cactgcgggc
     9721 gacgcaaacc ttaagattga ggtgtagggt gtgtgcggta cgcacgcacg cggtttttgt
     9781 tactaccgaa tgattccaaa ccatgccgta atccagtcag cagcaaacgc tgcttgggtc
     9841 atgtaccaac aaaactcaat atcaaaggcc gtctgaagaa taattttcag acggcttctc
     9901 tctatcaaaa gcagcctgca cattcaaaaa tcgaagtgca ggctgctttt tgtgatgatt
     9961 ggaaaaaaca cacactattt ga
//
LOCUS       DAWGKF010000065         9875 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.065, whole genome shotgun sequence.
ACCESSION   DAWGKF010000065 DAWGKF010000000
VERSION     DAWGKF010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9875)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9875)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9875
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.065"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(312..545)
                     /locus_tag="WHR07_001122"
     CDS             complement(312..545)
                     /locus_tag="WHR07_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HEZ2130340.1"
                     /translation="MKLTLMFREYCSLCHKMRDALKPFQNEYGFGLEVVDVDENPVLE
                     EKYNELVPVLLAGDEEICHWFLDEDRLKQFLER"
     gene            complement(711..911)
                     /locus_tag="WHR07_001123"
     CDS             complement(711..911)
                     /locus_tag="WHR07_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HEZ2130341.1"
                     /translation="MFVCICNAVTDHQIKETIAAGATTMGDLQSQLGVASCCGCCGEL
                     AASFLTAHNAQPTVTAGINVQA"
     gene            complement(1083..1958)
                     /gene="xerD"
                     /locus_tag="WHR07_001124"
     CDS             complement(1083..1958)
                     /gene="xerD"
                     /locus_tag="WHR07_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HEZ2130342.1"
                     /translation="MEEGLIDRLLETLWLDRRLSQNTLNGYRRDLEKIARRLSQSGRM
                     LKDADEADLAAAVYVDGEQRSSQARALSACKRLYIWMEREGIRTDNPTRLLKPPKIDK
                     NIPTLITEQQISRLLAAPDTDTPHGLRDKALLELMYATGLRVSEAVGLNFSSVDLDRG
                     CITALGKGDKQRMVPMGQESAYWVERYYTEARPLLLKGRNCDALFVSQKKTGISRQLA
                     WMIVKEYAGRAGIGYISPHSLRHAFATHLVRHGLDLRVVQDMLGHADLNTTQIYTHVA
                     NVWLQGVVKEHHSRN"
     gene            complement(2010..2450)
                     /locus_tag="WHR07_001125"
     CDS             complement(2010..2450)
                     /locus_tag="WHR07_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEZ2130343.1"
                     /translation="MDVKYEFTLPSSSGADFHSAEHLPLVVYFYPKDSTLGCTTEGLD
                     FNARLEQFEALGYTVVGISRDGVKAHQNFCAKQGFRFELLSDKDETVCRLFDVIKLKK
                     LYGKESLGIERSTFVLNKDGEIAHEWRKVKVAGHAQEVLETLSR"
     gene            2771..3709
                     /locus_tag="WHR07_001126"
     CDS             2771..3709
                     /locus_tag="WHR07_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEZ2130344.1"
                     /translation="MSIHTLKRLPSSLLLGLCLSLPSAHLFADNDILGQFLEQNMLTS
                     SDPIEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISK
                     LMSAMVVLDANLDMNETVTITPDEIDRIKGTGSRLAIGTALTRKELLHLSLMSSENRA
                     THALGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGLNFQNVSTAKDLSLMVNAAA
                     QYPQIRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKA
                     NIQNQPVTIVLLNSPTSATRVNDARKIESWMLQQRS"
     gene            3838..4131
                     /gene="hfq"
                     /locus_tag="WHR07_001127"
     CDS             3838..4131
                     /gene="hfq"
                     /locus_tag="WHR07_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HEZ2130345.1"
                     /translation="MTAKGQMLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYV
                     VLLRNTSVTQMVYKHAISTIVPARSVNLQHENRPQAAPTSTLVQVETVQQPAE"
     gene            4216..4782
                     /locus_tag="WHR07_001128"
     CDS             4216..4782
                     /locus_tag="WHR07_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ2130346.1"
                     /translation="MLLQNILPFAHCLLRKALPEGGNALDGTAGNGHDTLFLAQTAGI
                     RGKVWAFDIQPQALSRTRCRLKEARYENVQLILDGHENLKQYVSEPLNAAIFNFGWLP
                     GGDKSLTTHTETSIPALCATLSLLKEGGMLIAVLYPGHENGKQEAEAIEQWAKNLPQE
                     QFAVLSYGFTNRKNNPPYLLAFEKLRQK"
     gene            4836..5210
                     /locus_tag="WHR07_001129"
     CDS             4836..5210
                     /locus_tag="WHR07_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB2 family protein"
                     /protein_id="HEZ2130347.1"
                     /translation="MQYLIVKYSHQIFVTITILVFNIRVFLLWKNPKKPLVGFWKALP
                     HLNDTMLLFTGLWLMKITHFSPFNAPWLGTKILLLLAYIALGMMMMRARPRSTKFYTV
                     YLLAMCCVACIVYLAKTKVLPF"
     gene            5220..5714
                     /gene="folK"
                     /locus_tag="WHR07_001130"
     CDS             5220..5714
                     /gene="folK"
                     /locus_tag="WHR07_001130"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HEZ2130348.1"
                     /translation="MNNRHFAVIALGSNLENPAQQVRAALDTLSSHPDIRLKQASSLY
                     MTAPVGYDNQPDFVNAVCTVSTTLDGIALLAELNRIEADFGRERSFRNAPRTLDLDII
                     DFDGISSDDTRLTLPHPRAHERSFVIRPLAEILPDFVLGKHGKVAELSKRLGNQGIRL
                     LPDR"
     gene            complement(5839..6318)
                     /locus_tag="WHR07_001131"
     CDS             complement(5839..6318)
                     /locus_tag="WHR07_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEZ2130349.1"
                     /translation="MPESIFKQISLDILKLHRDSVYSLLATSGCNCQVHEAAYVNIDG
                     KYYIALSCEPEVGEVKTGILLIEDESRNLRLSWVGSARELDCKDNAYKRALSALSRKL
                     GRCKDKLHTAVQPFLLELVPEKGRFSVGDEEVWISRNDLVRALYPVGYSMRQAVFQI"
     gene            complement(6538..7275)
                     /gene="ubiE"
                     /locus_tag="WHR07_001132"
     CDS             complement(6538..7275)
                     /gene="ubiE"
                     /locus_tag="WHR07_001132"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HEZ2130350.1"
                     /translation="MGGQKTHFGFSTVNEDEKAGKVAEVFHSVAKNYDIMNDVMSAGL
                     HRVWKHFTINTAHLKKGDKVLDIAGGTGDLSRGWAKRVGKEGEVWLTDINSSMLTVGR
                     DRLLNEGMILPVSLADAEKLPFPDNYFNLVSVAFGLRNMTHKDAALKEMYRVLKPGGT
                     LLVLEFSKIYKPLEGAYDFYSFKLLPVMGKLIAKDADSYQYLAESIRMHPDQETLKQM
                     MLDAGFDSVDYHNMSAGIVALHKGVKF"
     gene            complement(7318..7686)
                     /locus_tag="WHR07_001133"
     CDS             complement(7318..7686)
                     /locus_tag="WHR07_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HEZ2130351.1"
                     /translation="MNNIPVEIRLLKNRTVLVLTYGDEPKNLPAEFLRVYSPSAEVRG
                     HGVGQDVLQTGKADVQITDLQPVGQYALKISFSDGHDSGLYDWAYLHRLAYGYDAMWQ
                     EYLDKLAAAGASRFEKQSDC"
     gene            7806..9425
                     /gene="mnmC"
                     /locus_tag="WHR07_001134"
     CDS             7806..9425
                     /gene="mnmC"
                     /locus_tag="WHR07_001134"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HEZ2130352.1"
                     /translation="MDNLVWDGVPDIRTLDQTIRKHAHPLNLIVCLPDNQIPDFQTAQ
                     DASDAECRLKHRLDQATQCLQFDSINLIEHILPDVRFWLVPPSRTRRLREHFHHISWQ
                     TEAIPQTESKPDKPWFALPQTSERQKPEHILVIGAGISGAATAHALASHGISVTVLEA
                     RKAAQAASGNRQGLLYAKISPHDTEQTELLLAGYGYTKRLLGHILPESETWGGNGIIH
                     LNYSRTEQQRNHELGLQKHHNHLYRSITQAEAEKIAGIPLSVPYDHPSCGLYWQHGVW
                     LNPPAFVRTLLNHPLIGLHEDTPLTDISHDGEKWIASTPNGIFSATHIIYCTGAHSPR
                     LPETNLAALPLRQIRGQTGLTPSTPFSEQLRCAVSGESYISPSWHGLHCYGASFIPNS
                     SHTGWNEAEEASNRQALAHLNPALSESLFAANPNPQKHQGHAAIRCDSPDHLPLVGAL
                     GDIAAMQQTYAKLALDKNYRIDAPCPYLPNAYANTAHGTRGLATAPICAAAVAAQILG
                     LPHPFSQRLRHALHPNRTIIRAIVRRKDLTP"
     gene            complement(9422..9571)
                     /locus_tag="WHR07_001135"
     CDS             complement(9422..9571)
                     /locus_tag="WHR07_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130353.1"
                     /translation="MDSKGNLLGIPYSLFWEENVMGVFDILPSGLVCLFEYDFLWSGW
                     HAAKA"
BASE COUNT         2636 a         2995 c         1988 g         2256 t
ORIGIN      
        1 taccgattac acaaacacat atcatcttta cacaatcatg cttccatcaa cagtaaaaca
       61 tgatatgatt gccaacaata acatctcaca ataaattttc taatttttat tgaaaaaatc
      121 aataaataag aattctccca accgacaaat aaaataaaga aagggttaat atgcaacatc
      181 gaagaagact agcaatttac caagcatcca aacgtgcttc ctttaccggc aggtcatccg
      241 ccccgcaaaa acgtaaagaa cgttgatttg aaaaaaatgc cgcctgaagt cctgcttcag
      301 acggcatttt tttaccgttc gagaaactgt ttcaacctgt cctcatccaa aaaccagtgg
      361 cagatttcct catctcccgc caacaaaacg ggaaccagct cattgtattt ttcttccaaa
      421 acaggatttt catccacatc gaccacttcc agcccgaacc cgtattcatt ttgaaaaggt
      481 ttgagtgcat cgcgcatttt gtggcacaag ctgcaatatt cacgaaacat caaggtcaat
      541 ttcatccgcg tttccttatc tgtcaatttg cacacgccaa agccttagac gcagcagaat
      601 catggtctat ttgggaaaaa acaatgtttt caaggaagat gatactcaag tcctgccaaa
      661 aacagcaaaa atgccgtctg aacagttcag acggcatttc caaaaccgtt ttacgcttga
      721 acattgatac ccgccgtaac cgtcggttgc gcattgtgcg ccgtcagaaa cgaagcggca
      781 agctccccac agcagccgca gcagctcgct acgcccaatt gcgactgcaa atcgcccatt
      841 gtggtcgcgc cggcggcgat ggtttccttg atttgatggt cggtaacggc attgcagatg
      901 cagacaaaca ttttgtgctc cgtgtgttct caaactatcg taccgatagc ggcttttatt
      961 atcgtatgcg aatataaata aaaacggttc gcattgcaag gtcggtatac acggtttgtc
     1021 ttggtaattt tttatcaagt ttgcattttc gattgatttc ttattaaacc aaagtagaag
     1081 cctcagtttc gggaatggtg ttccttcact acaccctgca accatacgtt ggcaacatgg
     1141 gtataaatct gcgtcgtatt caaatcggca tgtcccaaca tatcctgaac cacgcgcaaa
     1201 tccaagccgt gccgcaccag atgcgtggca aaggcgtggc gcaggctgtg cgggctgatg
     1261 tacccgatac ctgccctgcc ggcatattct ttgacaatca tccatgccaa ctgacgggaa
     1321 atgcccgttt ttttctgact gacaaacaat gcgtcgcaat tcctgccttt cagcagaagt
     1381 gggcgtgcct ccgtataata gcgttccacc caatacgccg actcctgccc catcgggacc
     1441 atcctctgct tatcaccctt tcccagcgcg gtaatacagc ccctgtccaa atccacactg
     1501 ctgaagttca gcccgaccgc ctcgctgacg cgcaagccgg tcgcgtacat caattcgagc
     1561 agggccttgt cccgcaaacc gtgcggcgtg tcggtatccg gggcggcaag cagtcgggaa
     1621 atctgctgct cggtgatcag ggtcggaata ttcttgtcga ttttgggcgg tttcagcaaa
     1681 cgggtgggat tgtccgtcct tatgccttca cgctccatcc atatatacag gcgtttgcat
     1741 gccgataatg cgcgcgcctg cgaactccgt tgctctccgt caacataaac cgccgccgcc
     1801 aaatccgctt cgtccgcatc cttcagcatt ctgcccgatt gggacaggcg gcgggcgatt
     1861 ttttccaaat cgcgccggta accgtttaaa gtattctgac tgagccgcct gtccaaccac
     1921 agcgtttcaa gcagcctgtc gatcaaacct tcttccatac cgttccaaac aaatgccgtc
     1981 tgaatcttct tcagacggca tggttcacat tatcgggaaa gcgtttccaa tacttcctgc
     2041 gcgtgacccg ccactttgac tttccgccat tcatgggcga tttctccatc cttattcaag
     2101 acgaacgtac tgcgctcgat acctaacgac tctttcccgt acagtttctt caatttgatg
     2161 acatcaaaca ggcggcacac tgtttcatcc ttgtcgctca acagctcgaa ccggaaaccc
     2221 tgcttggcgc aaaaattctg atgcgccttt acgccgtcgc gggaaatacc gaccacggta
     2281 taacccaatg cctcaaactg ttccaaacgc gcattgaaat ccaagccttc cgtcgtacag
     2341 cccagcgtac tgtctttcgg ataaaaatac acgaccaaag gcagatgttc tgccgaatga
     2401 aaatccgcac cgctgctcga aggcagggta aattcatatt tcacatccat agtcctactc
     2461 ccgatattcc cattattcaa aacggcacgc agacgcaccg ccgcaattgc caaaccaacc
     2521 ccgattctac cgccccaaag gacaaggatt caaccgccgg aaacatccaa accgacacac
     2581 gacggcatga aaaatatcca tgtcaaacca caaaatatgt tccgatttaa aaacagaatg
     2641 ttataaaacc caatccccaa aacacaacaa gaccgcccgc ctacgggcag tctcctgtca
     2701 gacgacatac tttacagatg gctgtttttt caacaaaata acgccaatac tcaaaaatat
     2761 ggaatcaaaa atgtccatcc atactctgaa acgcctgccc tcatcgctgc tgctcggtct
     2821 ctgcctttcc ctgccgtcag cccacctttt tgccgacaac gacattttag ggcaattttt
     2881 agaacagaac atgcttacct cctccgatcc gatagaaata ttcgccgaaa gcacgataca
     2941 ccccaccaac acccaagcca ttacaggcgg tctgattctc tcctcacagt ctgccctggt
     3001 cgtcaacaac aaaaccggac agatactgta tcagaaaaac gccgacagga ttatgcccat
     3061 cgcctccatt tccaaactga tgagcgcgat ggtcgttttg gatgcaaact tggacatgaa
     3121 cgaaaccgtt accattacgc ccgacgaaat cgaccgcatc aaagggaccg gcagccgtct
     3181 tgccataggt acggcactta cacgcaaaga actgctgcac ctgagcctga tgagcagcga
     3241 aaaccgcgcc acccatgcat tgggcagaac ctaccccggc ggcatgggcg catttgtcgc
     3301 cgccatgaac cgcaaagccc aaagcctcgg tatgtacggc agccgctttt acgaaccgac
     3361 cggactcaac ttccaaaacg tttccaccgc caaagacctg agccttatgg tcaacgccgc
     3421 cgcccaatat ccgcaaatcc gcaccaactc gacttccaac tacgcctcgg tacagaccaa
     3481 aaacgggcag cagaactaca aaaactccaa tgcgctggtc agggaaggca tgtggaacat
     3541 cgaattgcag aaaaccggct acatacgcga agcaggcagg tctatggttg tcaaagccaa
     3601 cattcaaaat caacccgtta ccatcgtatt gctgaactcg cccacatccg ccacacgcgt
     3661 caacgacgcc cgcaaaatcg aatcgtggat gctgcagcaa cgctcctgac atacaaatgc
     3721 ccggcggaaa accgcccaaa cacaaaaaaa attggtaatt tttcctattc aaggctacaa
     3781 ttcgacacgc acagggcatc tgcccgattt cacaatcata atagcggagt taaaaatatg
     3841 acagctaaag gacaaatgtt gcaagatccc ttcctgaacg ccctgcgtaa agagcatgtt
     3901 ccggtttcga tttacttagt taacggtatc aaattgcaag gtcaggttga gtctttcgat
     3961 caatacgttg ttctcctgag aaacacttcc gtcacccaaa tggtttacaa acacgccatt
     4021 tccaccatcg taccggcacg ctccgtcaac ctacaacatg aaaacagacc ccaagccgca
     4081 ccgacttcga ccctcgtcca agtggaaacc gtccagcagc ctgccgaata atccgcacga
     4141 agcatgacgt gtcatatctt tcaatacctt accggacaac ggtaaggtat ttttattttc
     4201 agacagcatt taaaaatgtt attgcaaaac atccttccat tcgcccattg ccttttgcgg
     4261 aaggcacttc ccgaaggcgg caatgctttg gacggcaccg ccggcaacgg acacgacacc
     4321 cttttcctcg cacaaaccgc aggcatccgg gggaaagtgt gggcattcga catccagccg
     4381 caagccctga gccgcactcg atgccgtctg aaagaagcga gatacgagaa tgtgcaactc
     4441 atcttagacg gacacgaaaa cctgaaacaa tatgtttcag aaccactaaa tgccgccatt
     4501 ttcaactttg gctggctgcc cggcggagat aaaagcctta ccacccatac ggaaaccagc
     4561 attcccgccc tttgcgcaac cctctccctg ctgaaagaag gcggtatgct tattgccgtc
     4621 ctctatccgg gacacgaaaa cggcaaacag gaggcagaag caatcgaaca atgggcaaaa
     4681 aacctgcctc aagaacagtt tgccgttttg agttacggct ttaccaaccg gaaaaacaac
     4741 ccgccctatc tgttggcatt tgaaaagtta cgtcaaaaat aaatgtttgc ggtaaaataa
     4801 gccgattcta acccttattt tgatacgagc cgaccatgca gtatctgatt gtcaaataca
     4861 gccatcaaat cttcgttacc atcaccattt tggtattcaa catccgtgtt ttcctacttt
     4921 ggaaaaatcc aaaaaagccc ttggtcggct tttggaaggc actgccccac cttaacgaca
     4981 ccatgctgct gtttacggga ttgtggctga tgaaaattac ccatttctcc ccgttcaacg
     5041 cgccttggct cggtacaaaa atcctgcttc tgctcgccta tatcgcattg ggtatgatga
     5101 tgatgcgcgc ccgtccgcgt tcgaccaagt tctacaccgt ttacctgctc gccatgtgtt
     5161 gcgtcgcctg catcgtttac cttgccaaaa ccaaagtcct gcctttctga aacaccgtta
     5221 tgaacaacag acattttgcc gtcatcgccc tgggcagtaa tcttgaaaac cctgcccaac
     5281 aggtacgcgc cgcattggac acgctgtcgt cccatcctga catccgtctt aaacaggctt
     5341 cctcactgta tatgaccgcg cccgtcggtt acgacaatca gcccgatttt gtcaatgccg
     5401 tctgcaccgt ttccaccact ctggacggca ttgccctgct tgccgaactc aaccgtatcg
     5461 aggctgattt cggacgcgaa cgcagcttcc gcaacgcgcc gcgcacattg gatttggaca
     5521 ttatcgactt tgacggcatc tccagcgacg acacccgact caccctgccg catccgcgcg
     5581 cgcacgaacg cagtttcgtc atccgccctt tggcagaaat cctccctgat tttgttttag
     5641 gaaaacacgg aaaggttgcc gaattgtcaa aacggctggg caatcaaggt atccgtcttt
     5701 tacccgacag gtaattccgc acgcggatgc cgtctgaaag cctttcagac ggcatttttc
     5761 ctttgccgcc aacacgcgtg caaaaaaatc gccccttgga aaaggggcgc aaaaggaaca
     5821 caaaccacta ccaaaacttt aaatctgaaa cactgcctgc cgcatactgt atccgacagg
     5881 atataaagcc ctcactaaat cgtttcgaga aatccaaact tcttcatcgc cgacagaaaa
     5941 tctgcctttc tccggtacca gctccaacag aaacggttga accgccgtat gcaacttgtc
     6001 cttacaccgc cccagctttc tagacaaggc ggacagggcg cgtttgtagg cattatcctt
     6061 gcagtcaagc tcccgcgcac tgccgaccca gctcaaacga aggttgcggc tttcatcctc
     6121 aatcagcaaa atgcctgttt tgacttcccc cacctcgggc tcgcatgaaa gcgcaatata
     6181 atatttgccg tcgatgttga catacgccgc ttcatgcacc tgacagttgc agccggaagt
     6241 ggcaagcagc gaataaacag agtcccgatg cagtttcaaa atatcaaggg aaatctgttt
     6301 aaaaatactt tccggcattt ttccctcctt tcgtctgctg cgttgtttac tggattgact
     6361 gcattataca gacatctccc aatcttgcaa atgataattg ttcctatttt ttaaaaaatt
     6421 tataaattat tgatggatat gtgaattaat tttaagattt aaaatctctt tctcaaaaaa
     6481 acacaaaaat gccgtctgaa acgtgttcag acggcattgg cttcacaggc agtccgttta
     6541 aaatttcacg cccttatgca gcgcgacgat gcccgcactc atattgtgat aatccacgct
     6601 gtcgaagccc gcatccagca tcatctgttt caaagtttcc tgatcggggt gcatacggat
     6661 ggattcggcg agatactggt agctgtccgc atctttggca atcagtttgc ccatgaccgg
     6721 cagcagcttg aacgaataga aatcatacgc gccttcgagc ggcttgtaga ttttggaaaa
     6781 ctccaacacc agcaacgtgc cgccaggttt caaaacacga tacatctctt tcagcgcggc
     6841 atctttatgc gtcatgttcc gcaagccgaa cgccacggaa actaagttga aataattgtc
     6901 agggaaaggc agtttttccg catcggcaag cgacacgggc aaaatcatgc cttcgttcaa
     6961 cagacggtcg cgcccgacgg tcagcataga ggaattaata tcggtcagcc aaacctcgcc
     7021 ttccttgccg acccgtttcg cccaaccgcg cgacaaatcg cccgtaccgc ccgcaatgtc
     7081 caacacttta tcgccttttt tcaggtgcgc cgtgttgatg gtgaaatgct tccacaccct
     7141 gtgcagccct gccgacatga catcattcat aatgtcgtag tttttggcga cggagtggaa
     7201 cacttccgcc actttgccgg ctttctcatc ttcgttgacc gtgctgaacc cgaaatgcgt
     7261 tttttgtcca cccatattct aaccacctcc ctgataccgc cctacggcat cccaaactta
     7321 acaatctgat tgcttttcaa aacgcgacgc gcccgccgcc gccaatttgt ccaaatattc
     7381 ctgccacatc gcatcgtatc cgtatgccag tctgtgcaga tacgcccaat cgtaaagacc
     7441 gctgtcgtgc ccgtccgaaa aactgatttt cagcgcgtac tgtccgacag gctgcaaatc
     7501 cgtaatttgc acatctgcct taccggtctg caaaacatcc tgtcccacac cgtgtccgcg
     7561 cacttccgca ctcggcgaat agacgcgtaa aaattcggca ggcagatttt taggttcgtc
     7621 cccataagtc aaaaccaaca cggtacggtt tttcaacaaa cggatttcaa caggaatatt
     7681 attcaaaaaa cacctcggtt cggcatacaa tatccggcag gcgcaggcgt gccttcaaac
     7741 ggcgcgtatt ttaacagctt tatcccgata ccgatattca aacccacact ttaaacggca
     7801 ttgatatgga caatctcgta tgggacggcg ttcccgacat ccgcacactc gaccaaacca
     7861 tccgcaaaca cgcacacccg ctcaacctga ttgtctgcct ccccgataat cagattcccg
     7921 attttcaaac cgcacaagat gcttcggacg cggaatgccg tctgaagcac cgtttggatc
     7981 aggcaacgca gtgcctccag ttcgacagca tcaacctcat cgaacacatc ctgcccgatg
     8041 tccgcttctg gctggttccc ccttcacgca cccgccgcct gcgcgaacac ttccaccaca
     8101 tttcctggca gaccgaagcc atcccgcaaa ccgaaagtaa gcccgacaaa ccctggtttg
     8161 cacttccaca aacatccgaa cggcaaaaac cggaacacat cctcgttatc ggcgcgggca
     8221 tatccggcgc ggcaaccgcc cacgccttag catcgcacgg catttccgtt accgtattgg
     8281 aagcccgaaa agccgcccaa gccgccagcg gcaaccgcca agggctgctc tacgccaaaa
     8341 tctcgccgca cgacaccgaa cagaccgaac ttttgcttgc cggctacggc tacaccaaac
     8401 gcctgctcgg acacatcctg cccgaatccg aaacctgggg cggcaacggc atcatccacc
     8461 tcaattacag ccgcaccgaa caacaacgca atcacgaatt gggtttgcaa aaacaccata
     8521 accacctcta ccgcagcatc acgcaggcag aagccgaaaa aatcgccggt atcccactgt
     8581 ccgtcccata cgaccaccct tcatgcggac tctactggca acacggcgta tggctcaatc
     8641 cacccgcatt cgtccgcacc ctcctcaacc atccgctcat tggactacac gaagacacac
     8701 cgttaaccga catttcccac gacggggaaa agtggattgc aagcacgcca aacggcatat
     8761 tttccgccac acacatcatc tactgcaccg gcgcgcacag cccccgcctg cccgaaacca
     8821 acctcgccgc cctgcctctc aggcaaatac gcggacaaac cggcctcaca ccgtccaccc
     8881 cgttttccga acaactgcgt tgcgccgttt caggcgaaag ctacatcagc ccgtcgtggc
     8941 acggactgca ctgctacggc gcgagtttta ttcccaacag cagccatacc ggatggaacg
     9001 aagccgaaga agcctcaaac cgccaagcat tggcacacct taaccccgcc ctttccgaat
     9061 cattgtttgc cgccaaccca aacccccaaa aacaccaagg gcacgccgcc atacgctgcg
     9121 acagccccga ccaccttccc ctagtcggcg cactcggcga cattgccgct atgcaacaaa
     9181 cttacgccaa actcgcgctg gacaaaaact atcgcatcga tgccccatgc ccatatctgc
     9241 ctaatgccta cgccaacacc gcccacggca cacgcgggct tgccaccgcc cccatctgcg
     9301 ccgccgccgt tgcagcccaa atcctaggct tgccccatcc cttttcacaa cgcctgcgcc
     9361 acgccctaca ccccaaccgc accatcatcc gcgccatcgt cagaaggaag gatctaaccc
     9421 cttaagcctt tgccgcatgc catcccgacc acagaaaatc atattcaaat aaacatacca
     9481 atcctgacgg taaaatatcg aaaacaccca taacattttc ttcccaaaat aaggagtaag
     9541 gaatgcctaa caaattgcct ttgctgtcca agatgaatgt tccgtaacat tcgaagactt
     9601 ccttaaccct gccagccgtt tcggtttctg taccccctgt tagataagga aggaatgaaa
     9661 aagccctgtt gattgtatga agtaaaggga gttaattttt gttaatcttc ccttctcagg
     9721 aactcaatat ataaggatgt taatttttat ttcccttctc gaggactcaa tatagtggat
     9781 taacaaaaac cagtacggcg ttgcctcgcc ttgccgtact atttgtactg tctgcggctt
     9841 catcgccttg tcctgatttt tgttaatcca ctata
//
LOCUS       DAWGKF010000066         9838 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.066, whole genome shotgun sequence.
ACCESSION   DAWGKF010000066 DAWGKF010000000
VERSION     DAWGKF010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9838)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9838)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9838
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.066"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            66..260
                     /locus_tag="WHR07_001136"
     CDS             66..260
                     /locus_tag="WHR07_001136"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130354.1"
                     /translation="MENAAASPAGRFRRHSRRRKCPTLKAQTHTKPYACTCNNPTDTA
                     VFSKPFASFTHPPRDAAATI"
     gene            431..955
                     /gene="nspA"
                     /locus_tag="WHR07_001137"
     CDS             431..955
                     /gene="nspA"
                     /locus_tag="WHR07_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein NspA"
                     /protein_id="HEZ2130355.1"
                     /translation="MKKALATLIALALPAAALAEGASGFYVQADAAHAKASSSLGSAK
                     GFSPRISAGYRINDLRFAVDYTRYKNYKAPSTDFKLYSIGASAIYDFDTQSPVKPYLG
                     ARLSLNRASVDLGGSDSFSQTSIGLGVLTGVSYAVTPNVDLDAGYRYNYIGKVNTVKN
                     VRSGELSVGVRVKF"
     gene            1091..1480
                     /locus_tag="WHR07_001138"
     CDS             1091..1480
                     /locus_tag="WHR07_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEZ2130356.1"
                     /translation="MSKTIIHTDKAPAAIGAYSQAVRAGDTVYMSGQIPLDPATMTVV
                     GNGDFRAEARQVFQNLQAVAEAAGGTLADIVKLNAYLTDLGNFAVFNEVMAEFIAEPF
                     PARAAVGVASLPKGVQVEAEAVLVLNA"
     gene            1558..2388
                     /locus_tag="WHR07_001139"
     CDS             1558..2388
                     /locus_tag="WHR07_001139"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="symmetrical bis(5'-nucleosyl)-tetraphosphatase"
                     /protein_id="HEZ2130357.1"
                     /translation="MAHYAIGDIQGCFDELTALLGKIGFNHGTDTLWLTGDIVNRGPK
                     SLETLQFCIRHENSVQIVLGNHDLHLLAVGCGEGAPKRSDTIEPILKHPDGKKMLDWL
                     RAQPLLIREGSRVMVHAGILPQWRITKAESLAREAEAELRGKKYVKFFSKMYGNKPAA
                     WDEGLKGYARLRFIVNAFTRMRALTFKNELDFDYKSTVKKMPPYLRPWFKAPDRQNLD
                     RTIIFGHWSSLGYTNADNVISLDTGALWGGQLTAVNLETEEITQVQAAGGIDWKSFAK
                     "
     gene            2403..3860
                     /locus_tag="WHR07_001140"
     CDS             2403..3860
                     /locus_tag="WHR07_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HEZ2130358.1"
                     /translation="MHKILPIAHVLSRLGMLFSFILLIPAALSYAFSDGAYTAFATTA
                     TVTLSGSCIARLATLRFRRELRPRDGFTLVLMLWLAFAAMAAMPMYLYFPNMGFTDAF
                     FESMSGLTTTGATVIPHVDGLAPSVNFWRHMLNWLGGMGIIVLAVAILPMLGVGGTQL
                     FKAEIPGIDKESKMSPRISQVAKKLWFGYTLITILAAACLHFAGMGWFDAVCHAMATL
                     SLGGFSTHDASIAYYNSPLIEAVIIVFTIVGGINFANHFAALNSRSLKTYWKDEECRT
                     MLLLLSGSILAAALYLWHTGYYAGFTESLRYTAFNFVSIGLANGLANTDFAQWPLLIS
                     LWMFFLANILANSGSTGGGIKTIRALVLFKFSLREMMVLLHPKAVRTVKISGKAIPDR
                     LALTVMSFIFIYFMTVVLFSFLLMASGMEFTTAFTAVIACITNAGPGLGEVGPAGNYA
                     GLDVMQKWICVTAMLLGRLEIFTVFILFTPAYWKK"
     gene            complement(3901..4290)
                     /locus_tag="WHR07_001141"
     CDS             complement(3901..4290)
                     /locus_tag="WHR07_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130359.1"
                     /translation="MWKISKENCEDLGFAIVCMFYDAINLSEFKLWLDIVVRDTPIDT
                     IPLYIFDLIDFDKGIGEIYDVIGVVNYGYISNDQKNALTGIAFLRGIDVYDPPISKEK
                     ALKALEKYPEIYQRFQHFFPFVELPLL"
     gene            complement(4472..4873)
                     /locus_tag="WHR07_001142"
     CDS             complement(4472..4873)
                     /locus_tag="WHR07_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130360.1"
                     /translation="MKIKPLQFSNNSRRFYVDKICVTEQDVNILASDRNYELNIEIFI
                     DNIIHFQITDESYKVKFSEYLFENKEKNDWDRNPAINYFFEIIDDSYMDWLKEESFGF
                     FEKKYYKAYIFFFSDSVIEVISSTEPVFYSK"
     gene            complement(5290..5619)
                     /locus_tag="WHR07_001143"
     CDS             complement(5290..5619)
                     /locus_tag="WHR07_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130361.1"
                     /translation="MTDKSKTEKLISSDDKQSVIDGILDMVFNSKAYEVPWISEKLME
                     LSKNKDLDIAGLSLTCFGHLARLHSNIGDYDKVISLLHSKQDDPELQGRAEDALEDIS
                     LFLSENH"
     gene            complement(5645..6352)
                     /locus_tag="WHR07_001144"
     CDS             complement(5645..6352)
                     /locus_tag="WHR07_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HINT domain-containing protein"
                     /protein_id="HEZ2130362.1"
                     /translation="MVKTADGYKAIARIRTGDRVFAKDEASGKTGYKPVTARYGNPYQ
                     ETVYIEISDGIGNNQTLISNKIHPFYSQGKWIQAGRLKKGDTLLSESGAKQTVQNITF
                     KQQPLKAYNLTVADWHTYFVKGSQAETEGVWVHNDCPYDKGNQRYKDASYHGKNDNSV
                     KSRAPTNGQAALDNSVQVKSTSPRRVGVDKANNEIVVLDKTQTFNNGFAEYHGHVRSW
                     QDLHTDQKNALKKAGLD"
     gene            complement(6488..7033)
                     /locus_tag="WHR07_001145"
     CDS             complement(6488..7033)
                     /locus_tag="WHR07_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004463655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HEZ2130363.1"
                     /translation="MIIVEHLEHYLGEIESGIKCLDRRYHLSVSVFPSQPYKGVTTFS
                     TLGLNRYDLNYKSRFELIFTCSEEWNKENIAAFLSGVAEYLIDNRQPILRGEIIQLPR
                     VIIEGSKMDALYVSAPFYFDDDFQVCYGEHYNIVFPLLVPLYKQEAELVEKKGWNAFE
                     QFLLDNEVGNLSDMNRKPFTW"
     gene            complement(7020..7172)
                     /locus_tag="WHR07_001146"
     CDS             complement(7020..7172)
                     /locus_tag="WHR07_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130364.1"
                     /translation="MDAKSLDGKIKMPLYFSDGISVNKKVGIGAQNSLRLAGIGMKSL
                     RKNDYS"
     gene            complement(7154..7426)
                     /locus_tag="WHR07_001147"
     CDS             complement(7154..7426)
                     /locus_tag="WHR07_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130365.1"
                     /translation="MMSVKELFKVILDENKDFPIRTIHRTPMGILPKPVALSIVQYEN
                     DPGFYLFYLDETGQEQTDTYHDTLDSAFEQAEFEFGISKEEWMQSP"
     gene            complement(7659..7982)
                     /locus_tag="WHR07_001148"
     CDS             complement(7659..7982)
                     /locus_tag="WHR07_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HEZ2130366.1"
                     /translation="MIVDEKSTSDVLKQYQELGFDLTKSMIIEFFIEGSQKNLQSIES
                     QIISYRQDFQISIEQNEFGEMWTCYCSVNIIPSLENILAIETTLFDIAQKNDCNYEGF
                     GSYGN"
     gene            complement(7985..8692)
                     /locus_tag="WHR07_001149"
     CDS             complement(7985..8692)
                     /locus_tag="WHR07_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HINT domain-containing protein"
                     /protein_id="HEZ2130367.1"
                     /translation="MVKTADGYKAIAHIQAGDRVFAKDEASGKTGYKPVTARYGNPYR
                     ETVYIEISDGIGNNQTLISNKIHPFYSQGKWIQAGRLKKGDTLLSESGAKQTVQNITL
                     KQQPLKAYNLTVADWHTYFVKGDKAETEGVWVHNECPYGEKYRTEVGSYTNTHESGRT
                     YSGKGTRQRSQISGAREARVNNDPHIATDFTPAKNNREAFKDESRRIDAHGGSKSTNN
                     YNRIESPGKKYRKQDGD"
     gene            complement(8826..9143)
                     /locus_tag="WHR07_001150"
     CDS             complement(8826..9143)
                     /locus_tag="WHR07_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130368.1"
                     /translation="MNILPSWLRVGMNIAMLGMIHSDIRLITVDYEERRRFLKIKNYL
                     SREAITEDHEDMEYLITELWSMCGEYFDEADFECIYSNHSSMELNQINGAVFRRKELI
                     SQA"
     gene            complement(9146..>9838)
                     /gene="mafB"
                     /locus_tag="WHR07_001151"
     CDS             complement(9146..>9838)
                     /gene="mafB"
                     /locus_tag="WHR07_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HEZ2130369.1"
                     /translation="YNNLGSNFSDRADEANRKMFEHNAKLDRWGNSMEFINGVAAGAL
                     NPFISAGEAVDQWMQENPNAAETVEALVNVLPFAKVKNLTKAAKPGKAAVSGDFSDSY
                     KHNTASRLSQSVDGEMFQTRNVDFKAKSIGTKIHDGAQGKHISGHRNYIEGKSTLNQN
                     INPQELLNGIHSGAYPVISKGARGNPVVDFGYPIGSDGKSGLSTNFGTIHSGKNGVHI
                     VPANPKTIKKVQ"
BASE COUNT         2490 a         2560 c         2001 g         2787 t
ORIGIN      
        1 cgcaaacaaa tcggcggccg cccgggaaaa cccgccccga acgcgtccgg aaaatatgct
       61 tatcgatgga aaacgcagcc gcatcccccg ccgggcgttt cagacggcac agccgccgcc
      121 ggaaatgtcc gacgcttaag gcacagacgc acacaaaacc gtatgcctgc acctgcaaca
      181 atccgacaga taccgctgtt ttttccaaac cgtttgcaag tttcacccat ccgccgcgtg
      241 atgccgccgc caccatttaa aggcaacgcg cgggttaacg gctttgccgt cggcaaagca
      301 gccggatacc gctacgtatc ttgaagtatt gaaaatatta cgatgcaaaa agaaaattta
      361 agtataatac agcaggattc tttaacggat tcttaacaat ttttctaact gaccataaag
      421 gaaccaaaat atgaaaaaag cacttgccac actgattgcc ctcgctctcc cggccgccgc
      481 actggcggaa ggcgcatccg gcttttacgt ccaagccgat gccgcacacg caaaagcctc
      541 aagctcttta ggttctgcca aaggcttcag cccgcgcatc tccgcaggct accgcatcaa
      601 cgacctccgc ttcgccgtcg attacacgcg ctacaaaaac tataaagccc catccaccga
      661 tttcaaactt tacagcatcg gcgcgtccgc catttacgac ttcgacaccc aatcgcccgt
      721 caaaccgtat ctcggcgcgc gcttgagcct caaccgcgcc tccgtcgact tgggcggcag
      781 cgacagcttc agccaaacct ccatcggcct cggcgtattg acgggcgtaa gctatgccgt
      841 taccccgaat gtcgatttgg atgccggcta ccgctacaac tacatcggca aagtcaacac
      901 tgtcaaaaac gtccgttccg gcgaactgtc cgtcggcgtg cgcgtcaaat tctgatatgc
      961 gccttattct gcaaaccgcc gagccttcgg cggttttgtt ttctgccacc gcaactacac
     1021 aagccggcgg ttttgtacga taatcccgaa tgctgcggct tctgccgccc tattttttga
     1081 ggaatccgaa atgtccaaaa ccatcatcca caccgacaaa gcccccgccg ccatcggcgc
     1141 gtacagccaa gccgtccgag caggcgacac cgtttacatg agcggtcaaa tccccctcga
     1201 tcccgccacg atgaccgtcg tcggcaacgg cgatttccgc gccgaagcgc gccaagtgtt
     1261 ccaaaacctg caagccgtcg ccgaagcggc aggcggcacg ctggccgaca tcgtcaaact
     1321 caacgcctac ctgaccgact tgggcaattt tgccgtcttc aacgaagtca tggcggaatt
     1381 tatcgccgag cccttccccg cccgcgccgc cgtcggcgtt gcctcgctgc ccaaaggcgt
     1441 gcaggtcgaa gccgaagccg tcctcgtttt gaacgcataa ttccacgttc ggactgcatg
     1501 atatttcaaa accatgccgt ccgaaccgca acactttccc acttcacaac atctgcaatg
     1561 gcacattacg caatcggcga catacaaggc tgtttcgacg aactgaccgc gctgctcggc
     1621 aaaatcggtt tcaaccacgg cacggacacc ctctggctga cgggcgacat cgtcaaccgc
     1681 ggcccgaaat ccctcgaaac gctgcaattc tgcatccggc acgaaaacag cgtgcaaatc
     1741 gtcctcggca accacgacct gcacctgctc gctgtcggct gcggcgaagg tgcgcccaaa
     1801 cgcagcgaca caatcgaacc catactcaaa caccccgacg gaaaaaaaat gctcgactgg
     1861 ctgcgtgcgc aaccgctgtt gatacgcgag ggcagccgcg tgatggtaca cgccggcatc
     1921 ctgccgcaat ggcgcataac caaagccgaa tcgctcgcta gagaagccga agccgaactg
     1981 cgcggcaaaa aatacgtcaa attcttctcc aaaatgtacg gcaacaaacc ggccgcgtgg
     2041 gacgaaggtt tgaaaggcta tgcccgcctg cgcttcatcg tcaacgcctt cacgcggatg
     2101 cgcgccctga cctttaaaaa cgaactggat ttcgactaca aatccacagt gaaaaaaatg
     2161 ccgccttacc tgcgcccgtg gttcaaagcc cccgaccggc aaaacctcga ccgcaccatc
     2221 atcttcggac actggtcctc gctgggctac acgaatgccg acaacgtcat ctcgctggac
     2281 accggcgcgc tgtggggcgg acagctgacc gccgtcaacc tcgaaacgga agaaattacc
     2341 caagtccaag ccgccggcgg catagactgg aaaagcttcg caaaataacg gaccgcccca
     2401 ctatgcacaa aatcctgccc atcgcccacg tcctctcccg actgggtatg ctgttttcct
     2461 ttatcctgct gatacccgcc gccctctcct acgccttttc ggacggcgcg tacaccgcct
     2521 tcgccaccac cgcgaccgtt accctttccg gctcgtgcat cgcccggctc gccaccctcc
     2581 ggttcaggcg cgaactgcgc ccgcgcgacg gctttaccct cgtcctgatg ttgtggctgg
     2641 cgtttgccgc tatggctgcg atgccgatgt acctgtattt cccgaatatg ggctttaccg
     2701 acgcattttt tgaatcgatg tcgggactga ccaccaccgg cgcgaccgtc atcccccacg
     2761 tcgacgggct cgccccctcc gtcaactttt ggcggcatat gctcaactgg ctgggcggga
     2821 tgggcatcat cgtccttgcc gtcgccatcc tgcctatgct cggcgtaggc ggcacgcagt
     2881 tattcaaagc cgaaatcccc ggcattgaca aagaaagcaa aatgtcgccg cgcatttccc
     2941 aagtggcgaa aaaactttgg ttcggctaca ccctgatcac catcctcgcg gcagcctgcc
     3001 tgcattttgc cgggatgggc tggttcgatg ccgtctgtca cgcgatggcg accctctcgc
     3061 tgggcgggtt ttccacccac gatgccagca tagcttatta caactccccc ctcatcgaag
     3121 cggtcatcat cgttttcacc attgtcggcg gcatcaattt tgccaaccat ttcgccgccc
     3181 tcaacagccg cagcctcaaa acctattgga aagacgaaga atgccggacg atgctgctgc
     3241 tgctctccgg cagcatcctt gccgccgccc tgtacctgtg gcacaccggc tattacgccg
     3301 gttttaccga atccctgcgc tacaccgcct tcaacttcgt ctccatcgga ctggcaaacg
     3361 ggctggccaa caccgacttc gcacaatggc cgctcctgat ttccctgtgg atgtttttcc
     3421 tcgccaacat cctcgccaac tccggctcga ccggcggcgg catcaaaacc atacgcgccc
     3481 tcgtcctgtt caaattcagc ctgcgcgaaa tgatggtgct gctgcacccc aaagccgtcc
     3541 gcaccgtcaa aatcagcggc aaggccatac ccgaccgcct cgcgctgacc gttatgtcct
     3601 tcatcttcat ctactttatg accgtcgtcc tcttcagctt cctgctgatg gcgagcggta
     3661 tggaatttac caccgccttc accgccgtca tcgcctgcat caccaacgcc ggccccggcc
     3721 tgggcgaagt cgggcccgcc ggcaattacg ccggtttgga cgtgatgcag aaatggatct
     3781 gcgttaccgc catgctcttg ggcaggctgg aaatcttcac cgtcttcatc ctcttcaccc
     3841 ccgcctactg gaagaaataa aaaatgccgt ctgaaaactt ttcagacggc atcttgtcct
     3901 ttaaagaagc ggaagctcta caaaaggaaa gaaatgctga aacctctgat aaatttcagg
     3961 atatttctct aaggctttta atgctttttc ttttgaaata ggcggatcat agacatctat
     4021 cccccttaag aaggcaatgc ccgttaatgc atttttttga tcatttgaaa tgtaaccata
     4081 attaacgact ccaattacat cataaatttc ccctataccc ttatcaaaat caatcaaatc
     4141 aaaaatatac aatggaattg tatcaatagg agtatctctg acaactatat ccaaccataa
     4201 tttaaattca gaaagattaa tagcatcata gaacatacag actattgcaa atcctaaatc
     4261 ttcacaattt tctttactaa ttttccacat aattatttac ctttatccat tgcttcccaa
     4321 ccgatacatc cggtatttta gcttctcctt tgccgtcaaa cactcctttg gttacctgct
     4381 ttgtgtcaaa aataccgtct gaaagccgaa tatcgtttca gacggcattt tgattgttgg
     4441 gtttttaatc agagctttgt ttgataattt gttattttga ataaaataca ggttctgtcg
     4501 agctgataac ttctattaca gaatcgctaa aaaagaaaat gtaagcctta taatatttct
     4561 tttcaaaaaa accaaaactt tcttctttca accagtccat ataactgtca tctattatct
     4621 cgaaaaaata atttatagca ggatttctat cccaatcatt tttttcttta ttttcaaata
     4681 aatattctga aaattttact ttataagatt catctgttat ttgaaaatga attatattgt
     4741 caataaatat ttcaatattt aattcataat ttcggtcgga tgccaaaatg ttcacatctt
     4801 gttcggtaac acaaattttg tctacgtaaa atctgcgact attgttagaa aattgtaatg
     4861 gtttaatctt cacaatcgtt ttccatatct aatttttgtt ttcttattgc cctgccagat
     4921 aaagcaggtc tgcctccgta ctgtctatcc tcacatttac tttcctgcca tcggctttta
     4981 tctccccggt tttaccgttt ttgccaactt tgcggctttg gcggcggcaa tgttgaaggc
     5041 ggcttcgacg gtttcggcgg cattggggtt gacccgtact catccgcaaa cggcaacacg
     5101 acggacggtg tttgcttttc agccgtctgc cgttttgacc aaggtgctgc cgtggaagga
     5161 gcaagtgtag gatttttgaa gaactcagtt ctcaatatcc tatttcaaac gaaggaaatg
     5221 ccgtctgaaa attaaacacg gtttcagacg gcattttgat tgttgggttt tcaacccgac
     5281 ctacggttcc taatgatttt cagataaaaa taaagaaata tcttctaacg catcttcagc
     5341 cctaccttga agctctggat catcttgctt tgaatgtagt aaagaaataa ctttatcgta
     5401 atcaccgata tttgaatgta gcctggcgag atgtccgaaa caggttagcg ataatccggc
     5461 aatatccaag tctttatttt tcgataattc catcaatttc tcagaaatcc acggtacttc
     5521 atatgctttg gaattaaata ccatatcaag aatgccatct ataacacttt gtttatcatc
     5581 agaagaaatc aacttttctg ttttactttt atcagtcatt ttttaatttt tccttttgaa
     5641 ttaactaatc caatcctgct ttttttaaag catttttctg atcggtatgc aaatcttgcc
     5701 aacttctgac atgcccgtga tattccgcaa aaccgttatt aaaagtttga gttttgtcta
     5761 atacaacgat ttcattattg gctttatcaa ccccaactct tcgaggagaa gttgatttaa
     5821 cttgaacgga attatcaaga gctgcttgtc cgtttgttgg tgctctactt ttcacagaat
     5881 tatcattttt gccatgataa gaagcgtctt tatatcgttg gttgccttta tcatacggac
     5941 aatcattatg aacccaaacc ccttccgttt ccgcctgact gcccttgacg aagtaggtat
     6001 gccaatcggc gacggtcaga ttgtaggctt tgagcggctg ctgtttgaag gtaatgtttt
     6061 gaaccgtctg ttttgcgccg ctttcggaaa gcagggtgtc gccttttttc agacgacctg
     6121 cctgtatcca ttttccttga ctgtaaaacg ggtggatttt attggaaatc agggtttggt
     6181 tgttgccgat gccgtctgaa atttcaatgt aaacggtttc ttgatacgga ttgccgtatc
     6241 gggcggtaac gggtttgtat cccgtttttc cgcttgcctc gtccttggcg aagacgcggt
     6301 cgccggttcg gatacgggca atggctttgt agccgtctgc cgttttgacc aaggtgctgc
     6361 cgtggaagga gcaggtgtag gatttttgaa gaacttagtt cccaatatcc tgtttaaaat
     6421 aaggggaagg tcgcctgaaa attaaacacg gtttcagacg gcactttgat taaatttaag
     6481 aaaatcctta ccaagtaaac ggtttccgat tcatatccga aaggttgcca acttcattat
     6541 ccagcaagaa ctgctcaaaa gcattccaac cctttttttc caccaattct gcttcctgtt
     6601 tatacaacgg gacaagcaaa gggaaaacga tattgtagtg ttcgccataa cagacctgaa
     6661 aatcatcgtc gaaataaaat ggggcggaaa catacagtgc atccattttg ctaccttcga
     6721 taattaccct gggtaattga ataatttcac ctcttaaaat aggttgtcta ttgtcaatca
     6781 aatattcagc cactcctgat agaaaagctg caatattttc tttattccat tcttcagaac
     6841 aggtaaaaat taattcaaac ctactcttat agttcaagtc atatcgattc aagcctaaag
     6901 tagaaaaagt agttacccct ttatatggtt gtgatgggaa gacggaaacg ctgagatgat
     6961 aacgtcgatc caagcatttt ataccgcttt cgatttcacc caaataatgt tctaaatgtt
     7021 caactataat cattttttct taaagatttc atccctatcc cggcaagacg taggctgttt
     7081 tgggctccaa taccgacttt tttattgacg gaaatgccgt ctgaaaaata aagcggcatc
     7141 ttgattttgc cgtctaagga ctttgcatcc attcctcttt gctgattcca aattcaaatt
     7201 cagcctgttc aaatgccgaa tctaatgtgt catgataagt atccgtttgt tcctgaccgg
     7261 tctcatccaa ataaaacaaa taaaatcccg ggtcattttc atattgaaca atacttaaag
     7321 caacaggttt gggaagtatc cccatcgggg tacgatgaat cgttctaata ggaaaatctt
     7381 tattttcatc taagatgact ttgaataatt cttttacact catcattctt caatcccgaa
     7441 taattgttac cgcactattt tctattacac gtccattggc tttgtagccg tctgccgttt
     7501 tgaccaaggt gctgccgtgg aaggagcagg tgtaggattt ttaaagaact tagatctcaa
     7561 tatcctgttt taaatgaagg aaaagccatc tgaaaattaa acatggtttc agacgacctt
     7621 ttgattgttg tgtttttcaa cccaacctac acttcttgtt agttcccata cgaaccaaaa
     7681 ccttcataat tacaatcatt tttttgtgca atatcaaata acgtagtttc aatagctaaa
     7741 atgttttcaa gagaagggat aatattgacg gaacaatagc aagtccacat ttctccgaat
     7801 tcattttgct caatactgat ttgaaaatct tgccgataag aaatgatttg actttctatt
     7861 gattgcagat tcttttgaga accctctata aaaaactcta ttatcatcga ttttgtcaaa
     7921 tcaaacccta gttcttgata ttgtttcagt acatctgaag tagatttttc gtcaacaatc
     7981 atttttaatc tccatcttgt tttcgatatt ttttccccgg gctttcaatt cgattgtaat
     8041 tattggtact tttggaacca ccgtgagcgt caattcttct agattcatct ttgaatgcct
     8101 ctcgattatt tttggcagga gtaaaatctg tagctatatg agggtcatta ttaaccctag
     8161 cttctcttgc tccagagatt tgggaacgtt gtcttgtgcc ctttccagaa taagttcgac
     8221 cactttcatg agtattagta taagaaccaa cttctgtcct atatttttct ccatacggac
     8281 actcattatg aacccaaacc ccttccgttt ccgccttatc acccttgacg aagtaagtat
     8341 gccagtcggc aacggtcagg ttgtaggctt tgagcggctg ctgtttgagg gtaatgtttt
     8401 gaaccgtctg ttttgcaccg ctttcggaaa gcagggtgtc gccttttttc agacgacctg
     8461 cctgtatcca ttttccttga ctgtaaaacg ggtggatttt attggaaatc agggtttggt
     8521 tgttgccgat gccgtctgaa atttcaatgt aaacggtttc ccgatacgga ttgccgtatc
     8581 gggcggtaac gggtttgtat cccgtttttc cgcttgcctc gtccttggcg aagacgcggt
     8641 cgccggcttg aatatgggca atggctttgt agccgtctgc cgttttgacc aaggtgctgc
     8701 cgtggaagga gcaggtgtag gatttttgaa gaactcagtt ctcaatatcc tatttcaaat
     8761 gaaggaaatg ccgtctgaaa attaaacacg gtttcagaag acattgtgat tgttggtttt
     8821 ttaacctacg cttgcgaaat taattccttt ctcctgaata ctgcaccatt tatttggttt
     8881 aactccatag aagaatgatt agaataaata cattcaaagt cagcttcatc aaaatattct
     8941 ccacacatag accataactc tgtaatcaaa tattccatat cttcatggtc ttctgtgatg
     9001 gcttctcttg ataaataatt tttgattttt aaaaaccttc ttctttcctc gtaatctacg
     9061 gtaattaacc tgatatctga gtgtatcatg cccagcattg ctatattcat accgactcgc
     9121 agccagcttg gtaatatatt cataactatt gcaccttttt aatggtttta gggttagccg
     9181 gaacaatgtg aactccattt ttacctgaat gaatcgtacc aaaattggta cttaatcctg
     9241 atttcccatc gctgcctata ggatacccaa aatcaacaac aggatttcct cttgctcctt
     9301 tagaaataac tggataagca cctgaatgta ttccgttcaa caattcttga ggattaatgt
     9361 tttgatttaa agtactctta ccttcaatgt agtttctatg tcctgaaata tgtttccctt
     9421 gagctccatc atgaatttta gtcccaatag attttgcttt aaaatcaaca ttgcgggttt
     9481 gaaacatttc tccatctaca gactgagata atcttgaagc agtgttatgc ttgtaggagt
     9541 ctgagaaatc cccactaacc gcagccttcc ccggttttgc cgcctttgtc aggtttttga
     9601 ctttggcaaa cggcaggacg ttgaccaggg cttcgacggt ttcggcggca ttggggtttt
     9661 cctgcatcca ctggtcaacg gcttcgcccg cgctgataaa ggggttgagc gcgccggcgg
     9721 cgacgccgtt gataaactcc atgctgttgc cccagcggtc gagcttggca ttgtgctcga
     9781 acatttttct gttggcttca tcggcgcggt cggagaaatt gctgccgagg ttgttgta
//
LOCUS       DAWGKF010000067         9798 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.067, whole genome shotgun sequence.
ACCESSION   DAWGKF010000067 DAWGKF010000000
VERSION     DAWGKF010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9798)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9798)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9798
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.067"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(128..1174)
                     /gene="adhP"
                     /locus_tag="WHR07_001152"
     CDS             complement(128..1174)
                     /gene="adhP"
                     /locus_tag="WHR07_001152"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HEZ2130370.1"
                     /translation="MKMQAVVVNKNVAGDVEIVEREVRPLEYGEALVEVEYCGVCHTD
                     LHVAAGDYGEKPGRVLGHEGIGLVKEVADGVKNLKVGDRVSIAWLFQSCGSCEYCNTG
                     RETLCRSVLNAGYTADGGMATHCIVSADYAVKVPEGLDPAQASSITCAGVTTYKAIKV
                     SSVRPGQWIAIYGAGGLGNLGVQYAKKVFGAHVVAIDINDEKLAFAKESGADLVINAA
                     KEDAAKVIQEKTGGAHVAIVTAVSAAAFNSAVNCVRAGGRVVAIGLPPESMDLSIPRL
                     VLDGIEVVGSLVGTRKDLEEAFQFGAEGLVVPKVQLRALDEAPAIFQEMREGKITGRM
                     VIDMKKECGCGHHH"
     gene            complement(1458..1847)
                     /locus_tag="WHR07_001153"
     CDS             complement(1458..1847)
                     /locus_tag="WHR07_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HEZ2130371.1"
                     /translation="MKNVQKGFTLLELMIAVAILGILTLITYPSYKTYIRRIRLSEVK
                     STLLMNAQTMERYYRQKGTFENYDKNKLKQNKYFNVTLSKVSPDHFTLQADPNPTTND
                     GETCVVTLNDGGTIAAFGTNQSCPGFD"
     gene            2073..3251
                     /locus_tag="WHR07_001154"
     CDS             2073..3251
                     /locus_tag="WHR07_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacA family efflux pump subunit"
                     /protein_id="HEZ2130372.1"
                     /translation="MAKMMKWAAVAAVAAAAVWGGWSYLKPEPQAAYITETVRRGDIS
                     RTVSATGEISPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTEK
                     SKLETYQAKLVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAEL
                     KALIRQSKISINTAESELGYTRITATMDGTVVAILVEEGQTVNAAQSAPTIIQLANLD
                     MMLNKMQIAEGDITKVKAGQDISFTILSEPDTPIKAKLDSVDPGLTTMSSGGYNSSTD
                     TASNAVYYYARSFVPNPDGKLATGMTTQNTVEIDGVKNVLIIPSLTVKNRGGKAFVRV
                     LGADGKAAEREIRTGMRDSMNTEVKSGLKEGDKVVISEITAAEQQESGERALGGPPRR
                     "
     gene            3317..5251
                     /locus_tag="WHR07_001155"
     CDS             3317..5251
                     /locus_tag="WHR07_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacB family efflux pump subunit"
                     /protein_id="HEZ2130373.1"
                     /translation="MSLIECKNINRYFGSGENRVHILKDISLSIEKGDFVAIIGQSGS
                     GKSTLMNILGCLDTAGSGSYRIDGIETAKMQPDELAALRRERFGFIFQRYNLLSSLTA
                     RDNVALPAVYMGAGGKERSARAEKLLQDLGLASKEGNKPGELSGGQQQRVSIARALMN
                     GGEIIFADEPTGALDTASGKNVMEIIHKLHKAGHTVIMVTHDPGIAANANRVIEIRDG
                     EIISDTSKNPEIPASNVGRIREKASWSFYYDQFVEAFRMSVQAVLAHKMRSLLTMLGI
                     IIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTLTIDDAK
                     IIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFDENDV
                     KEDAQVVVIDQNVKDKLFADSDPLGKTILFRKRPLTVIGVMKKDENAFGNSDVLMLWS
                     PYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLADLLKARHGTEDFFMNNSDSIRQ
                     IVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIGIRMAIGARRGNILQ
                     QFLIEAVLICVIGGLVGVGLSAAVSLVFNHFVTDFPMDISAMSVIGAVACSTGIGIAF
                     GFMPANKAAKLNPIDALAQD"
     gene            complement(5569..6351)
                     /locus_tag="WHR07_001156"
     CDS             complement(5569..6351)
                     /locus_tag="WHR07_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HEZ2130374.1"
                     /translation="MKTKLIKILTPFTVLPLLACGQTPVSNANAEPAVKAESAGKSVA
                     ASLKARLEKTYSAQDLKVLSVSETPVKGIYEVVVSGRQIIYTDAEGGYMFVGELINID
                     TRKNLTEERAADLNKINFASLPLDKAIKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEK
                     MTDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGGSICDNPVA
                     ETTSLGEQFGFNGTPTLVFPNGRSQSGYSPMPQLEEIIRKNQ"
     gene            6490..8679
                     /locus_tag="WHR07_001157"
     CDS             6490..8679
                     /locus_tag="WHR07_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEZ2130375.1"
                     /translation="MIYHRIAVNVPLSDGLLTYSHSEPLPQGTRVLVPFCNKTVVGIV
                     WETDIAPDMDAARILGVQTTFSDEPPLPESWRDLLAFTSRYYHYPTGQAVFAALPQGL
                     KETRAVEMPQPPLFYALNEAGRAQTPPPARFNKKAALWDALLSGEMTMAALKQVNAQA
                     VKLIENWAEQGWIETTEAAKPVLRSYHGQASHSEFVLNANQQKASDAIQTALGRFQPF
                     LLYGITGSGKTEVYFDAMAKVLAQGRQVLFLLPEINLTPQLLKRVENRFADVPTAVLH
                     SQMAAGRRTQDYLRAMLGQAKLVIGTRLAVFTPMDDVGLIVVDEEHDGSFKQDNELRY
                     HARDLAVWRAKQGGCPIILGSATPSLESWHKAQSGAYRLLQLTERAHTAAQLPQVDIL
                     NVGRLKLDNGFSPQALQLLKQNFEAGGMSLVYLNRRGFAPALFCGDCGHTFGCPNCSA
                     KMVLHQRARQLRCHHCDHREPIPYKCPDCGNQDLTAVGHGTQRVEETLRAFLPKAAVV
                     RVDRDSTAHKNDWADLYRRIADNEIDILVGTQMLAKGHDFARLNLVIVLNADGSLYSA
                     DFRVPERLFAELMQVSGRAGRADKPGKVLIQTQLPEHPVFAAVKAQDYAVFAENELNE
                     RQMFAMPPFGFQTAVRADAPRVADAMEFLNAAKETLAPLLPESVSQFGAAPMLMVRLA
                     ERERAQIFLESTSRQDLHRAVSLWVQVLQQNRDGKIRWSVDVDPQEA"
     gene            complement(8726..9692)
                     /locus_tag="WHR07_001158"
                     /pseudo
     CDS             complement(8726..9692)
                     /locus_tag="WHR07_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703681.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
BASE COUNT         2298 a         2518 c         2843 g         2139 t
ORIGIN      
        1 gacgtgttgc gatacgggtt ttcagacggt atttcaaaca gaacagatta aaatcaaatc
       61 caaatccata aaaaatgccg tctgaacagc gttcagacgg catttcgatg tgtatcgcca
      121 cgtcaaatca gtggtgatga ccgcagccgc attctttttt catatcgatc accatacggc
      181 cggtgatttt gccttcgcgc atttcttgga aaatggcggg tgcttcatcc aaagcacgca
      241 gttggacttt cggcacaacc aaaccttccg cgccgaattg gaaggcttct tccaaatctt
      301 tgcgcgtgcc gaccaaagag ccgaccactt cgatgccgtc caaaaccaaa cgcgggatgg
      361 acaaatccat cgattccggc ggcagtccga tggcaaccac acgtccgccc gcgcggacgc
      421 aattcacggc agagttgaat gcggcggcgg atacggcggt aacaatggct acgtgtgcac
      481 cgccggtttt ttcctgaatc actttggcgg catcttcttt ggcagcgttg atgactaaat
      541 ctgcgccgct ttctttggca aaagccagtt tttcatcgtt gatgtcgatg gcgacgacgt
      601 gtgcgccaaa tacttttttc gcgtattgga cccccaagtt gcccaaaccg cccgcgccgt
      661 agatggcaat ccactgtccc ggacgaacac tggaaacttt aatggcttta taagtggtta
      721 caccggcaca agtaatgctc gaagcttgcg caggatccaa gccttctggg actttgaccg
      781 cgtaatcggc actcacgata cagtgggtcg ccatgccgcc gtcggcagta tagccagcgt
      841 tcaatacaga gcggcacagg gtttcgcggc cggtattgca gtattcgcaa gagccgcagc
      901 tttggaacag ccaggcgatg ctgacgcggt cgccgacttt cagatttttc acaccgtcgg
      961 caacttcttt aaccaaaccg atgccctcgt gtcccagcac gcggcccggt ttttcgccgt
     1021 agtcgcctgc cgcaacgtgc aggtcggtgt ggcacacgcc gcaatattcg acttcgacca
     1081 acgcctcgcc gtattccaac gggcgaacct cgcgttcgac tatttccaca tcgcccgcta
     1141 catttttatt cacaacaact gcctgcattt tcatgattgc gctccttagt tacggcaaaa
     1201 aaacctgtaa acggaatgtt gtccgatata agggtaagca tacgcttccg catctcacag
     1261 gtcaagtggt atgttgttga aaaatataga ttatatgtta tattataaca tcttggaaag
     1321 gcgcggcatc ggggcggttg ccggatgagg ggcggcaggt ttcaagtttg aaaaaccgga
     1381 tgtgcaaacc cataaagata ccgtctgaag ctgtgtccgg acggcatctt tacgggtttg
     1441 cgggcttcgg cggaggatta gtcgaagccg gggcaggatt ggtttgtacc gaaagcggca
     1501 atggtaccgc cgtcgttgag cgtaacgacg caggtttcgc cgtcgttggt ggtgggattg
     1561 gggtcggcct gaagggtaaa gtggtcgggg ctgactttgc ttaaggtaac gttgaaatat
     1621 ttgttttgtt tcagtttgtt tttatcgtag ttttcaaacg tccctttttg gcggtagtaa
     1681 cgttccatgg tctgcgcgtt catcagcagg gtggatttga cttccgacag gcggatgcgc
     1741 cggatgtagg ttttatagga agggtaggtg atgagcgtca ggatgccgag gatggcgacg
     1801 gcaatcatca gctcgagcag cgtaaagcct ttttgaacgt ttttcatagc aatgtgtttc
     1861 catttgtttg tcggtcggcg acattataac gccgtatcgg aaatggcgga atatgtaaac
     1921 ggattgaaat tttcgggaaa gcagattgta taagccattt aaaacaaatg gttattttta
     1981 ttgtcggcag tttgccgcct tggatggggc agggacttgc ggtagaatcc gcttccgatt
     2041 tatgggattg acgcatacag agaattgaaa acatggcaaa aatgatgaaa tgggcggctg
     2101 ttgcggcggt cgcggcggca gcggtttggg gcggatggtc ttatctgaag cccgagccgc
     2161 aggctgctta tattacggaa acggtcaggc gcggcgacat cagccggacg gtttctgcaa
     2221 caggggagat ttcgccgtcc aacctggtat cggtcggcgc gcaggcatcg gggcagatta
     2281 agaaacttta tgtcaaactc gggcaacagg ttaaaaaggg cgatttgatt gcggaaatca
     2341 attcgacctc gcagaccaat acgctcaata cggaaaaatc caaattggaa acgtatcagg
     2401 cgaagctggt gtcggcacag attgcattgg gcagcgcgga gaagaaatat aagcgtcagg
     2461 cggcgttatg gaaggaaaac gcgacttcca aagaggattt ggaaagcgcg caggatgcgt
     2521 ttgccgccgc caaagccaat gttgccgagc tgaaggcttt aatcagacag agcaaaattt
     2581 ccatcaatac cgccgagtcg gaattgggct acacgcgcat taccgcaacg atggacggca
     2641 cggtggtggc gattctcgtg gaagaggggc agactgtgaa cgcggcgcag tccgcaccga
     2701 cgattatcca gcttgccaat ttggatatga tgttgaacaa aatgcagatt gccgagggcg
     2761 atattaccaa ggtgaaggcg gggcaggata tttcgtttac gattttgtcc gaaccggata
     2821 cgccgattaa ggcgaagctc gacagcgtcg accccgggct gaccacgatg tcgtcgggcg
     2881 gctacaacag cagtacggat acggcttcca atgcggtcta ttattatgcc cgttcgtttg
     2941 tgcccaatcc ggacggcaaa ctcgccacgg ggatgacgac gcagaatacg gttgaaatcg
     3001 acggtgtgaa aaatgtgctg attattccgt cgctgaccgt gaaaaatcgc ggcggcaagg
     3061 cgtttgtgcg cgtgttgggt gcggacggca aggcggcgga acgcgaaatc cggaccggta
     3121 tgagagacag tatgaatacc gaagtaaaaa gcgggttgaa agagggggac aaagtggtca
     3181 tctccgaaat aaccgccgcc gagcagcagg aaagcggcga acgcgcccta ggcggcccgc
     3241 cgcgccgata aacgaatatg ccgtctgaac acggaaacgg tttcagacgg catttgttat
     3301 tgatttacgg aatattatga gcttgatcga atgtaaaaac atcaaccgct atttcggcag
     3361 cggcgagaac cgcgtccata ttttgaaaga catcagcctg tcgatagaga agggcgattt
     3421 tgtcgccatc atcgggcagt ccggttcggg caagtccacg ctgatgaaca tactcggctg
     3481 tttggatacc gccggttccg gttcgtaccg aatcgacggc atcgaaactg ccaaaatgca
     3541 gcctgacgag ctggcggcat tgcgccgcga acgcttcggt ttcatcttcc aacgctacaa
     3601 cctcttaagc tcgctgaccg caagggacaa cgtcgcgctg ccagccgtgt atatgggcgc
     3661 gggcggcaaa gagcgttccg cgcgtgcgga gaagttgttg caggatttgg gtttggcaag
     3721 caaagagggc aacaagcccg gcgaactctc gggcggacag cagcagcgcg tctccatcgc
     3781 ccgcgccctg atgaacggcg gagaaatcat cttcgccgac gagccgaccg gcgcgctcga
     3841 taccgccagc ggcaaaaacg tgatggaaat catccacaag ctgcacaaag ccgggcatac
     3901 cgtcattatg gtcacgcacg accccggcat cgccgccaat gccaaccgcg tcatcgaaat
     3961 ccgggacggc gaaatcattt ccgacacctc gaaaaatccc gaaatccccg caagcaatgt
     4021 cgggaggatt cgggaaaaag cctcgtggtc gttttattac gaccagtttg tcgaagcctt
     4081 cagaatgtcg gtgcaagcag tattggcgca caaaatgcgt tcgcttctga cgatgctcgg
     4141 catcatcatc ggtatcgctt cggttgtctc cgtcgtcgca ttgggcaatg gttcgcagaa
     4201 aaaaatcctt gaagacatca gttcgatagg gacgaacacc atcagcatct tcccggggcg
     4261 cggcttcggc gacaggcgca gcggcaggat taaaaccctg accatagacg acgcaaaaat
     4321 catcgccaaa caaagctacg ttgcttccgc cacgcccatg acttcgagcg gcggcacgct
     4381 gacctaccgc aataccgacc tgaccgcttc tttgtacggc gtgggcgaac aatatttcga
     4441 cgtgcgcgga ctgaagctgg aaacggggcg gctgtttgac gaaaacgatg tgaaagaaga
     4501 cgcgcaggtc gtcgtcatcg accaaaatgt caaagacaaa ctctttgcgg actcggatcc
     4561 gttgggtaaa accattttgt tcaggaaacg ccccttgacc gtcatcggcg tgatgaaaaa
     4621 agacgaaaac gctttcggca attccgacgt gctgatgctt tggtcgccct atacgacggt
     4681 gatgcaccaa atcacaggcg agagccacac caactccatc accgtcaaaa tcaaagacaa
     4741 tgccaatacc caggttgccg aaaaagggct ggccgatctg ctcaaagcgc ggcacggcac
     4801 ggaagatttc ttcatgaaca acagcgacag catcaggcag atagtcgaaa gcaccaccgg
     4861 tacgatgaag ctgctgattt cctccatcgc cctgatttca ttggtagtcg gcggcatcgg
     4921 cgtgatgaac atcatgctgg tgtccgttac cgagcgcacc aaagaaatcg gcatacggat
     4981 ggcaatcggc gcgcggcgcg gcaatatttt gcagcagttt ttgattgagg cggtgttaat
     5041 ctgcgtcatc ggcggtttgg tcggcgtggg tttgtccgcc gccgtcagcc tcgtgttcaa
     5101 tcattttgta accgacttcc cgatggacat ttccgccatg tccgtcatcg gcgcggtcgc
     5161 ctgttcgacc ggaatcggca tcgcgttcgg ctttatgcct gccaataaag cagccaaact
     5221 caatccgata gacgcattgg cacaggattg aggttggaca aagatgccgc ctgaagctgc
     5281 agaaccggtc attttggagc agaaacttat tggacaaaaa cggtttctta gattctacgt
     5341 tccagattcc cacttgcgtg ggaatgacgg cggtgtgttt cgtattgttc aatttattat
     5401 tttcaatcat tcaatgggtt aggatgtgtt tgttggcttg ctgtactggt ttaaatttaa
     5461 tccactataa atttaatcca ctataacttt cagtgcggat tggttttcag gcggcatttc
     5521 ccgcaaaaaa ggcttggaat tttccaagcc ttttgttttg cggatggatt attgattttt
     5581 gcggatgatt tcctccagtt ggggcatcgg gctgtagccg ctttggctgc gcccgttggg
     5641 gaagacgagg gtcggcgtgc cgttgaagcc gaattgttcg cccaaggaag tggtttccgc
     5701 gacgggattg tcgcagatgc tgccgccgac cgggaatttg cctttacgca tccaatccgt
     5761 ccacgctttg gcgcggtcgg gctgacacca taagatttgc gccttgcgcg cggcatcggg
     5821 gtgcaggccg gcaatgggca tcataaagct gtaaaccgtc acgtcggtca ttttttcaaa
     5881 ctcgtgttcc aagcgtttgc agaacggaca atcggggtcg gagaagacgg cgactttcag
     5941 cttgccgttg ccgcgcactt ctttgatggc tttgtccaaa ggcagggagg cgaagttgat
     6001 tttgttcaaa tcggcggcgc gttcttcggt caggtttttg cgcgtgtcga tgttgatgag
     6061 ttcgccgacg aacatatagc cgccttcggc atcggtgtag ataatctgcc tgccgctgac
     6121 gacgacttcg taaatgcctt tgaccggtgt ttcgctgacg ctcaacactt tcaaatcttg
     6181 ggcggaatag gttttttcca aacgcgcttt caaagaggcg gcaacggatt tgccggcgga
     6241 ctcggctttg acggcgggtt cggcgttggc attggaaacg ggcgtttgcc cgcaagccag
     6301 cagcgggagg acggtaaagg gggtcaagat tttgattaac ttggttttca tataaagatg
     6361 attgcgcgtg ttggaaaagc ggaattgtat caaatctctg ttgcgcctgc attgcgccta
     6421 ggctcaattt atcgtctgaa aatagcttat gcctgttaaa atacgcaaaa aaatgatttg
     6481 cctgcctgta tgatctacca ccgcatcgcc gtaaacgtgc cgctttcaga cggccttttg
     6541 acttattcac attccgagcc gctgccgcag ggaacgcggg tgcttgtgcc tttctgcaac
     6601 aagaccgtgg tcgggattgt gtgggaaacg gatattgcgc cggatatgga tgcggcgcgg
     6661 attttgggcg ttcagacgac cttttcggac gaaccgccgc tgcccgaaag ctggcgtgat
     6721 ttgttggcgt ttacgtcgcg ttattaccac tatccgacgg ggcaggcggt gtttgccgca
     6781 ctgccgcaag gtttgaagga aacgcgcgcg gtggaaatgc cgcagccgcc attgttttat
     6841 gctttaaacg aagcaggcag ggcgcaaacg ccgccgccgg cgcggttcaa caaaaaagcg
     6901 gctttgtggg acgcgctgct gtcgggcgaa atgacgatgg cagcgttgaa gcaggtaaac
     6961 gcgcaggcgg tgaaattaat cgaaaattgg gcggaacagg gttggattga aacgacggaa
     7021 gcggcgaaac ccgttttaag gtcgtaccac gggcaggctt cgcactctga atttgtgttg
     7081 aatgccaacc agcagaaagc ttccgatgcc attcagacgg cattgggacg cttccaaccg
     7141 tttctgctgt atggcatcac cggcagcggc aagaccgagg tgtatttcga tgcgatggcg
     7201 aaagtgttgg cgcaggggcg gcaggtgttg tttctgttgc ccgaaatcaa cctcacgccg
     7261 cagcttttga agcgtgtgga aaaccgtttt gccgacgtgc cgactgccgt gttgcacagc
     7321 cagatggcgg caggcaggcg cacgcaggat tatttgcgcg cgatgttggg gcaggcgaaa
     7381 ttggtcatcg gcacgcggct ggcggtgttc acgccgatgg atgatgtcgg gctgattgtg
     7441 gtcgatgagg aacacgacgg ctcgttcaaa caggacaacg aattacgcta ccacgcccgc
     7501 gatttggcgg tgtggcgggc gaagcagggc ggctgcccga tcatattggg cagtgccacc
     7561 cccagcttgg agagctggca caaggcgcaa agcggcgcgt accgcctgct gcaactgacc
     7621 gaacgcgccc ataccgccgc gcaactgccg caagtggaca ttctcaacgt aggccgtctg
     7681 aaacttgaca acggcttctc gccgcaagcc ttgcaacttt tgaagcagaa ctttgaagcg
     7741 ggcggtatgt cgctggtgta cctcaatcgt cgcggtttcg cgcccgcgct gttttgcggc
     7801 gactgcggcc ataccttcgg ctgcccgaac tgctccgcca aaatggtgct gcaccaacgc
     7861 gcccgccaac tgcgctgcca ccactgcgac caccgcgaac ccatcccgta caaatgcccc
     7921 gactgcggta accaagacct gaccgccgtc ggccacggca cgcagcgcgt cgaagaaacc
     7981 ctgcgcgcct tcctgcccaa ggcagccgtc gtccgcgtcg atagggacag tacggcgcac
     8041 aaaaacgact gggcggattt gtaccgccgc atcgccgaca acgaaatcga cattctggtc
     8101 ggcacgcaga tgcttgccaa aggccatgat ttcgcgcggc tcaacctcgt tatcgtattg
     8161 aacgccgacg gcagcctgta cagcgcggac tttcgcgtgc cggaaaggct gttcgccgag
     8221 ctgatgcagg tgtccggcag ggcggggcgc gccgataaac ccggcaaggt gttgatacag
     8281 acccaactgc ccgaacatcc cgtcttcgcc gccgtcaaag cgcaggacta cgccgtgttt
     8341 gccgaaaacg aattgaacga gcggcaaatg ttcgccatgc cgcccttcgg tttccagacc
     8401 gccgtccgcg ccgacgcgcc gcgtgttgcc gatgcgatgg aatttctcaa cgccgccaaa
     8461 gaaaccctcg ccccgctgtt gcccgaaagc gtttcacagt ttggcgcggc tccgatgctg
     8521 atggtgcgcc tcgccgaacg cgaacgcgct caaatcttcc tcgaatcaac atcccgacag
     8581 gatttgcacc gcgccgtgag tttgtgggtg caggtgttgc agcagaacag ggacggcaaa
     8641 atcagatggt cggtggatgt cgatccgcag gaggcttgat tattggcaat ccgatgccgt
     8701 ctgaaaaccg tttcagacgg catttttatt ccggatcatc cgtaaacgca ttttcccgaa
     8761 atatcggtac aaatgtgaaa agatacagta cgaacacggc ggcggtcaga atcgcgggga
     8821 tggtgatgaa gaatatcggg ttcacgttca ttaaaacagc gcgcgaaacg gcggcggcga
     8881 aaaggatggg gacggcgatg cggcagagtt tggggtagtc gagtttggta aagccgctgt
     8941 gccacagtcc ggcagtcagc cacaccatca tcacgccgcc catcatgcct ccgagggtaa
     9001 tcaggtgcag gggcgcggag gcgggcaggt tttgcagttt cgccgcgcct gcccacagat
     9061 agcctgcggc ggcaaagagt tggagcaggt aataagtgcg gacgtagtgt ttgcgcagga
     9121 gttcgtgatg gtgaagctca cgcagcttgg cgagcaggat aaagccgacg gcgagcgcgg
     9181 taaaaccggc ggtttgcgcg ggcagccaaa gttcggcggc ggcgtgcaag agcaggaaag
     9241 taatggcgat gtttttataa acgatatttg gaataaaaac agggtctttc agacggcatt
     9301 ctttcagggc ttccgcgccc aaaagaatac tgacgcgcac ggatacgaac atcaccgccg
     9361 ccatatttag atgcacttgc gcgcgcaaca ggttcaaatc gccgctgacg gcatatgccg
     9421 tctgaaaaac agtgaacgcg gcaagtaaca ttagcagggc gaagttgtcg gtgtttcggt
     9481 ctagccaaat cagccgggcg cagaacagca gcaacaccag ccaataggcg gcgacgaaaa
     9541 acgaggcagt ttgcggcgaa aagggcagta tagcggatgc ggcgagcaat aatgccgcca
     9601 tcaaagtcgc gacaggtttc aggttacccg aaaaaaaccg tccagtccaa caaagccgca
     9661 gtcaggaaac caccatatgc cgcaggtagc atgagttcta agaagatttg gcggtgcagg
     9721 acgacggcac cggggctgat gaaaaacacc aacgcgccga gtatggcaag cactgtcgcg
     9781 ccgacgaaaa acgggcgc
//
LOCUS       DAWGKF010000068         9798 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.068, whole genome shotgun sequence.
ACCESSION   DAWGKF010000068 DAWGKF010000000
VERSION     DAWGKF010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9798)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9798)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9798
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.068"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(13..1308)
                     /locus_tag="WHR07_001159"
     CDS             complement(13..1308)
                     /locus_tag="WHR07_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEZ2130376.1"
                     /translation="MIRPDFQEYLPSYYFSSVNPHTVYPKLQCRLKTDTCIIGGGLSG
                     LCTALPLAEQGHETVVLEAARIGFGASGRSGGQVISDYACGMEEIEKQVGLEQAQWFW
                     QQSLQAVELVDERVRKHAIDCDWQRGYATVAIRSQHWEELQQWHEHAQKYYGATHYQL
                     WDNTELKQQLDSDMYQGAQFDPLSGHLHPLNYTLGIARAAAEAGTKIFEHSPMIRIEP
                     YQNGWLVYTPEGSVECKNLVYAVNTYAGLNPIFQPLERKAIAVSTFIIATEPLGARAK
                     GLIRNNMAVCDNRHILDYYRLSADGRLLFGGKDNEFIDNPARMTELVRQDMLKVFPQL
                     DDVKIEYSWGGECDITANLVPHFGRLAANVFYAQGYSGHGMAITGIAGLAVAEAILGD
                     ECRLKPFERLRQPNIILQPFLRKLGSFLGSKYYQWKDSR"
     gene            complement(1434..2321)
                     /locus_tag="WHR07_001160"
     CDS             complement(1434..2321)
                     /locus_tag="WHR07_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEZ2130377.1"
                     /translation="MQKSKLSWFLKLMLALSLAFLYIPLVVLVIYSFNESKLVTVWGG
                     FSTKWYGALLENDTILEAAWLSLRIAVVSSLAAVVLGTLAGYAMARIKRFRGSTLFAG
                     MISAPMVMPDVITGLSMLLLIIQVQIFLQGSEWLQHLYFDRGFFTIFLGHTTLCMAYI
                     TVVIRSRLVELDQSLEEAAMDLGARPLKIFFVITLPLIAPAIASGFLLGITLSLDDLV
                     ITSFLSGPGSSTLPQVIFSKIKLGLDPQMNVLATILIGIIGTLVIIVNYWMMRQATKR
                     DREAAEAYRQEKLAAEKAN"
     gene            complement(2321..3286)
                     /locus_tag="WHR07_001161"
     CDS             complement(2321..3286)
                     /locus_tag="WHR07_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEZ2130378.1"
                     /translation="MNLNKLKNKLFRRPGQRVVIAVPYIWLLVLFLIPFAIVLKISFA
                     EQEIAIPPFTPLTSIDEDLGRLNITISYQNYADIFQNFWHTLNPFGDSENSNIYLMTY
                     WSSIKTALMTTVICLLVGYPTAYAISRANPSVRNGLLLAIMLPFWTSFLLRVYAWMGL
                     LGHNGIVNNLLIKMGIISEPLDLFYNAFSLNLVMVYAYLPFMILPLYTQLVKLDNRLL
                     EAASDLGAGPVKSFLTITLPLSKTGIIAGSMLVFVPAVGEFVIPELVGGSENLMIGKV
                     LWQAFFDQNNWPLASAVAVVMVALLVVPIALFQHYENRELEEGAK"
     gene            complement(3302..4426)
                     /gene="potA"
                     /locus_tag="WHR07_001162"
     CDS             complement(3302..4426)
                     /gene="potA"
                     /locus_tag="WHR07_001162"
                     /EC_number="7.6.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter ATP-binding protein"
                     /protein_id="HEZ2130379.1"
                     /translation="MTATTASSAKPYLQIQGLVKKFGDNYAVDNIDLDIYQHEIFALL
                     GSSGSGKSTLLRMLAGMESPNQGKIILDGQDITKLAPYDRPINMMFQSYALFPHMTVE
                     QNIAFGLKQDKMPKGEIAARVEEMLRLVQMTKFAKRKPHQLSGGQQQRIALARSLAKR
                     PKILLLDEPLGALDKKLRQQTQLELVNTLEQVGVTCIMVTHDQEEAMTMATRIAIMSD
                     GQLQQVGTPSDVYDYPNSRFTAEFIGETNIFDGVVIEDHADYAVIECEGLENHVRIDH
                     GLGGPSEQDLWVSIRPEDIDLYKEKPEYLGDYNWAKGTVKEIAYLGSFAIYHIKLANG
                     RVVKSQVPAPYWYVRNITPPTWDETVYISWPENQPTPLFR"
     gene            complement(4622..4729)
                     /locus_tag="WHR07_001163"
                     /pseudo
     CDS             complement(4622..4729)
                     /locus_tag="WHR07_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(4808..5077)
                     /gene="rpsO"
                     /locus_tag="WHR07_001164"
     CDS             complement(4808..5077)
                     /gene="rpsO"
                     /locus_tag="WHR07_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEZ2130380.1"
                     /translation="MALTVEQKAQIVKDFQRKEGDTGSSEVQVALLTFRINDLTPHFK
                     ANPKDHHSRRGLLKMVSQRRRLLAYLRRTQPDTYRALITRLGLRK"
     gene            complement(5300..6235)
                     /gene="secF"
                     /locus_tag="WHR07_001165"
     CDS             complement(5300..6235)
                     /gene="secF"
                     /locus_tag="WHR07_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HEZ2130381.1"
                     /translation="MELFKIKRDIPFMSYGKLTTFISLVTFIAAVFFLVTKGLNFSVE
                     FTGGTVMEVQYQQGADVNKMRERLDTLKIGDVQVQALGTNKHIMIRLPNKEGVTSAQL
                     SNQVMDLLKKDSPDVTLRQVEFIGPQVGEELVSNGLMALGFVVIGIIIYLSMRFEWRF
                     AVSAIIANMHDIVIILGCFAFFQWEFSLTVLAGILAVLGYSVNESVVVFDRIRENFRK
                     PAMRGHAVPEVIDNAITATMSRTIITHGSTEAMVVSMLVFGGAALHGFSMALTIGIVF
                     GIYSSVLVASPLLLMFGLSRDNIGKEPKKKEEIVV"
     gene            complement(6239..8092)
                     /gene="secD"
                     /locus_tag="WHR07_001166"
     CDS             complement(6239..8092)
                     /gene="secD"
                     /locus_tag="WHR07_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEZ2130382.1"
                     /translation="MNRYPLWKYLLIVFTIAVAAVYSLPNLFGETPAVQVSTNRQAII
                     INEQTQSKVDAALQNAGIQTDGMFVVDNSLKVRFKDTETQLKARDVIENTLGEGYITA
                     LNLLADSPEWMAKIKANPMFLGLDLRGGVHFTMQVDMKAAMQKTFERYSGDIRRELRR
                     EKIRSGTVRQAGNSLTVPLQDAGDVQKALPQLRKLFPEATLNSDGSNIVLTLSEEAVN
                     KVRSDAVKQNITTLHNRVNELGVAEPVIQQSGADRIVVQLPGVQDTAKAKDIIGRTAT
                     LELRMVEDDPAKLREALEGNVPSGYELLSSGGDRPETLLISKQVELTGDNINDAQPSF
                     DQMGAPAVSLSLDSAGGSIFGELTAANVGKRMAMVLIDQGKSEVVTAPVIRTAITGGR
                     VEISGSMTTAEANDTSLLLRAGSLAAPMQIVEERTIGPSLGKENIEKGFHSTLWGFAI
                     VAAFMVVYYRLMGFFSTIALSANILFLIGILSAMQATLTLPGMAALALTLGMAIDSNV
                     LINERIREELRVGVPPQQAINLGFQHAWATIVDSNLTSLIAGIALLVFGSGPVRGFAV
                     VHCLGILTSMYSSVVVFRALVNLWYGRRRKLQNISIGAVWKPEAETAAGKE"
     gene            complement(8304..8570)
                     /gene="yajC"
                     /locus_tag="WHR07_001167"
     CDS             complement(8304..8570)
                     /gene="yajC"
                     /locus_tag="WHR07_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEZ2130383.1"
                     /translation="MNQAVAQFAPLVLIMVVFYFLIMRPQQKKFKAHQAMLAALKVGD
                     KVVLAAGFKGKVTRVGEQFFTVDIGQGTKIEVEVERNAIAAKVD"
     gene            8698..>9798
                     /locus_tag="WHR07_001168"
     CDS             8698..>9798
                     /locus_tag="WHR07_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HEZ2130384.1"
                     /translation="MSLTRLILKFYALLRLFLGKNARTAWISHPACAGHEPGANHPDS
                     PDRILCIEQALRRAGIWQHLQTIEAEEISDTRLALVHSSKYLNRLESCLPQKGKIFRL
                     DNDTAISTGSLSAAHFAAGSAVQAVDMVMNRKAWHAFCAARPPGHHAGSGKAGGFCLL
                     NNVAAGVMHAIAEYRLKRIAVIDFDVHYGDGTAEIFKDDPRILFFNLFETDLFPFPEN
                     NDMPDGGNMVHLPLPPGTGSRTFREAVRRQWLPRLAAFKPELVLLSAGFDAHRLDESG
                     RLNLHEADFAWLTHKIIQTASGCPGKIVSVLEGGYTLEPLAQSAAEHIRVLAGLGKSD
                     AATAYQKTLDPTKKRFAKPKTGQVRQPTQSDRY"
BASE COUNT         2511 a         2585 c         2430 g         2272 t
ORIGIN      
        1 tgcctgcgac gcttaacggc tgtctttcca ctgataatat ttcgagccga ggaaagaacc
       61 gagtttgcgc aaaaacggtt gcaggataat attcggctgg cgcaaccgct caaacggctt
      121 cagacggcat tcgtccccta aaattgcttc ggcaaccgcc agacctgcaa tgcctgttat
      181 cgccatcccg tgtccggaat aaccttgtgc ataaaaaaca tttgcggcca aacgtccgaa
      241 atgcgggaca aggttggcgg taatgtcgca ctccccgccc cacgaatatt cgattttgac
      301 atcgtcaagc tgcggaaaaa ctttaagcat atcttggcgg acaagctcgg tcatacgcgc
      361 aggattgtcg ataaactcgt tatccttacc gccgaaaagc agtctgccgt ccgcgctgag
      421 gcggtaataa tccaaaatat ggcggttgtc gcatactgcc atattgttac ggataagccc
      481 ttttgcgcgc gcccccaagg gttcggtcgc aataataaag gtgctaacgg caatcgcctt
      541 gcgttccaaa ggctggaata tcgggttcaa acctgcatag gtattgacgg catacaccag
      601 atttttgcat tcgacgctgc cttcgggggt gtaaaccagc caaccgtttt gataaggttc
      661 aatgcgtatc atgggagaat gctcaaaaat cttcgtacca gcttcggcag cggcgcgggc
      721 gatgcccaac gtgtaattga gcggatggag atgcccggac aagggatcga actgtgcgcc
      781 ttggtacata tcgctgtcaa gctgctgctt cagttcagtg ttatcccaga gttgataatg
      841 agttgcaccg taatattttt gggcgtgctc atgccattgt tgcaattctt cccaatgctg
      901 cgaacggatg gcaaccgtgg cataaccgcg ctgccaatcg caatcaatgg catgtttgcg
      961 gacgcgttcg tccaccagtt cgaccgcctg caaagactgt tgccaaaacc attgcgcttg
     1021 ctccaaaccg acctgttttt caatttcctc cataccgcag gcgtaatcgc tgataacctg
     1081 cccgccactc cgtcccgacg cgccgaaacc gatacgcgcg gcttccaaca caaccgtttc
     1141 atgtccctgc tccgccaagg gcaatgcagt gcacaaacca ctcaatccgc cgccgatgat
     1201 acaggtatcg gttttcagac ggcattgaag tttcggataa acagtatgag gattaaccga
     1261 actgaaataa taagaaggca gatattcttg aaaatcaggg cgaatcattg tgtttgcttt
     1321 atcgggtata ttttcggacg gaatgataca ggctgtcgag ccatatcgtc caaacagaaa
     1381 atcggttgaa gaaaacaggc tgacccagtc atgcggtcag cctgccttat taattaattt
     1441 gctttctcgg cagccaattt ttcttggcgg taggcttctg ccgcttctcg gtcacgcttg
     1501 gttgcctgcc tcatcatcca ataattgacg atgatgacca atgttccgat gatgccgatc
     1561 aggatggttg ccaaaacgtt catctgcgga tcaagaccca gcttgatttt ggagaaaatc
     1621 acctgcggca atgtggatga accggggccg gagaggaatg aggtaatcac caaatcatcc
     1681 aaagacaggg taatgccgag cagaaagcct gaagcgatgg caggggcaat caaaggcaaa
     1741 gtgatgacaa aaaagatttt cagcggacgc gcgcccaaat ccattgcggc ttcttcgagc
     1801 gattggtcaa gctcaaccag acgcgaacgg ataacaacgg taatgtatgc catgcacagc
     1861 gtcgtatgtc ctaagaaaat agtgaaaaag ccacgatcga agtagagatg ttgtaaccat
     1921 tcactgccct gcaaaaatat ctgtacctga ataatcagca gcagcataga cagaccggta
     1981 atcacgtcgg gcatcaccat aggtgcggaa atcataccgg cgaacaaggt actgccgcga
     2041 aaacgtttaa tccgcgccat cgcatagcct gccagcgtgc ccaaaacgac ggcggcaagc
     2101 gaagacacaa cggcaatccg cagcgacagc caagcggctt ccaagatggt gtcgttttcc
     2161 agcaatgcgc cgtaccactt ggtcgaaaag ccgccccaaa cggttaccag cttggattcg
     2221 ttaaacgaat agatgaccaa aacaaccagc gggatataca gaaacgccag cgacagtgcc
     2281 aacatcagtt tcaagaacca agataatttg gatttctgca ttatttggct ccttcttcca
     2341 attcgcggtt ttcataatgc tgaaacaggg caatcggcac gaccagcagc gcgaccatca
     2401 cgacggcgac ggcggaagcc agcggccagt tgttttgatc gaagaacgcc tgccacaaga
     2461 ctttaccaat catcaggttt tccgaaccgc cgaccagctc gggaatgacg aactcgccga
     2521 cagcagggac gaaaaccagc atggagcctg caataatgcc ggttttcgac aaaggcaggg
     2581 taatcgtcaa gaacgatttg accggccccg cgcccaaatc ggaagccgct tcaagcaggc
     2641 ggttgtcgag tttcaccagt tgcgtgtata gcggcagaat cataaacggc agataggcgt
     2701 aaaccatcac caaattgagc gaaaaggcat tgtagaacaa atccaaaggc tcgctgataa
     2761 tacccatttt aatcaacagg ttgtttacaa taccgttatg cccgagcaga cccatccacg
     2821 catagacgcg caacaggaac gatgtccaaa agggcagcat aatggcaagc agcaaaccat
     2881 tgcggacaga aggattggca cgagaaatcg cataggcggt cggataaccg accaacaggc
     2941 aaatcactgt cgtcatcaat gcggttttga ttgaagacca gtaggtcatc agatagatat
     3001 tgctgttttc actgtcgccg aacgggttaa gggtatgcca aaaattttgg aaaatatcgg
     3061 catagttttg ataactgatg gtgatattca gacgacctaa atcttcgtcg atgctggtca
     3121 gcggcgtaaa cggcggaatg gcgatttctt gttcggcaaa gctgattttc agcacgatgg
     3181 cgaacggaat cagaaacagc accaaaagcc aaatatacgg tacggcaatc accacacgct
     3241 gccccgggcg gcggaacagt ttgtttttca gtttattaag gttcattgca ttccccttaa
     3301 atcaacggaa cagtggcgta ggctggtttt ccggccagct gatatacacg gtttcgtccc
     3361 aagttggcgg tgtaatgttg cgtacatacc agtaaggtgc aggaacttgg cttttgacga
     3421 cgcgcccgtt ggcgagtttg atatggtata tggcaaagct gcccaaatag gcgatttctt
     3481 ttaccgtgcc tttcgcccag ttgtagtcgc ccaaatattc gggtttttct ttatataaat
     3541 caatatcctc tggtcgaata ctaacccaaa ggtcctgctc gctcggacca cccaaaccgt
     3601 gatcgatgcg gacgtggttt tccaaacctt cgcattcgat aacggcatag tcggcatgat
     3661 cttcaatcac cacaccgtca aagatgttgg tttcgccgat aaactcggca gtgaagcggc
     3721 tgttgggata gtcgtacacg tcgctgggtg tgccgacttg ctgcaactga ccgtcagaca
     3781 taatggcgat gcgggtcgcc atcgtcatcg cctcttcttg gtcgtgcgta accataatac
     3841 aggttacgcc gacttgttcc agcgtattga ccaactcaag ctgggtttgt tggcgcagtt
     3901 ttttgtccaa tgcaccgagg ggctcatcca gcagtagaat tttcggacgt tttgccagac
     3961 tgcgtgccaa agcaatgcgc tgctgctgac caccagaaag ctggtgaggt ttgcgtttgg
     4021 caaatttggt catctgaacc aggcggagca tttcttcgac gcgcgcggcg atttcgcctt
     4081 taggcatttt gtcctgtttc agaccaaagg caatgttttg ttctacggtc atatgcggaa
     4141 aaagcgcgta actttggaac atcatattga tggggcggtc atagggtgca agtttggtaa
     4201 tatcctgacc atcaaggata attttcccct gattggggct ttccataccc gccagcatac
     4261 gcagcagcgt ggattttccg ctgccggaac tgcccaaaag ggcgaagatt tcgtgttgat
     4321 aaatgtccaa gtcgatgtta tcgacagcgt aattgtcacc aaactttttc accaagcctt
     4381 ggatttgcag ataaggtttg gctgaagacg cagtggttgc ggtcataatg gcaatactcc
     4441 aataaaaaaa cgagtaccgg caaaacggat tttcgaatgg gtgataaaaa gctgtttgat
     4501 tgctggcggg agtcgcaacg tctgatgccg tctgaaactc ttgtgaagcg cacgggcagc
     4561 atgaaatgga acaagattcc aaagaacttt atattatatt agtttatgcg gttttcgggc
     4621 aatatagtgg attaaattta aaccagtaca gcgttgcctt gccttgccgt actatttgta
     4681 ctgtctgcgg cttcgtcgcc ttgtcctgat ttaaatttaa tccactataa atatggattt
     4741 gagcttgtcg gaaagcaaca gaaaagaaaa caccgcccat ttttctgggc ggtgtcggaa
     4801 agcgtaatta tttacgcaga cccaagcggg taatcaacgc gcgatacgta tcgggctggg
     4861 tacggcgcaa gtaggccagc aggcggcggc gttggctgac cattttcaac aggccgcgac
     4921 ggctgtggtg gtctttgggg ttggctttga agtggggggt caggtcgttg atgcggaaag
     4981 tcaacagagc gacttgtact tcggaagagc cggtgtcgcc ttctttgcgt tggaaatctt
     5041 taacgatttg tgctttttgt tctacggtca gtgccataat gaaaactcca aaaatataag
     5101 aatccccata gggattcaga caagtttgcc aagcctgaag acaacggcaa actccctatg
     5161 cccaagatag gacaacgtgg cattatgaca caattcccgc atttctgcac aatattttaa
     5221 gaccgtggaa gtaaccgtta aaaatgccgt ctgaagcatt gtctgcttga gacggcaatg
     5281 ttcagacggc atatgcgctt caaaccacga tttcttcttt cttcttcggt tctttaccga
     5341 tattgtcgcg gctcaaaccg aacattagca gaagcgggct ggcaaccaat acggaagaat
     5401 aaatgccgaa cacgatgcca atggtcaacg ccatagaaaa gccgtgcaag gccgcaccgc
     5461 cgaacaccag catagaaaca accatcgcct cggtcgaacc gtgggtaatg atggtgcggc
     5521 tcatcgttgc ggtaatcgcg ttgtcgatga cttccggcac ggcatgtccg cgcatcgccg
     5581 gcttgcggaa gttttcacgg atacggtcga agacgacgac ggattcgttc acagaatagc
     5641 ccaatacggc aaggataccc gccaagacgg tcagcgaaaa ttcccattgg aagaaggcaa
     5701 agcagccgag aataatcacg atgtcgtgca tattggcgat aatggcagat acggcaaaac
     5761 gccattcaaa acgcatcgac aggtaaataa tgatgccgat aacgacaaaa cctaaagcca
     5821 tcaatccatt acttaccaat tcctcaccga cttgcgggcc gataaattcg acttggcgca
     5881 aggtaacgtc gggactgtct tttttcagca aatccataac ctgattggac aactgtgcgg
     5941 aagtaacacc ttctttgttc ggcaggcgga tcatgatgtg tttgttcgta cccaatgcct
     6001 gaacctgtac atcacctatt ttcagcgtat cgaggcgttc gcgcatctta ttgacatccg
     6061 caccctgctg atattggact tccattaccg taccgccggt aaattcgaca gagaaattca
     6121 ggcctttggt caccaagaag aacacggcag cgataaacgt aaccaacgaa atgaaggtcg
     6181 tcagtttgcc gtagctcata aacggaatat cgcgtttgat tttaaagagt tccatagctt
     6241 actccttacc tgccgcagtt tcggcttcag gtttccatac cgcaccgatg gaaatattct
     6301 gcaatttgcg tctgcgtccg taccacagat tgaccaacgc acggaatacg acgacggacg
     6361 aatacatcga agtcagaata cccaaacagt gtacgaccgc aaaaccgcgt accgggccgg
     6421 aaccgaatac caaaagcgcg ataccggcaa tcagcgaagt caggttggaa tcgacaatgg
     6481 tcgcccatgc gtgttggaaa ccgagattga ttgcctgctg cggcggcacg ccgacacgca
     6541 attcttcgcg gatacgttcg ttaatcaaga cgttggagtc gattgccata cccaaagtca
     6601 acgccagcgc ggccataccc ggtaacgtca acgttgcctg catagcagac aaaataccga
     6661 ttaggaacag tatgttggca ctcaatgcaa tggtagaaaa gaaacccatc agacgatagt
     6721 aaaccaccat gaatgcagca acgatggcaa aaccccataa agtcgaatgg aagccttttt
     6781 cgatgttctc cttacccaaa gacggaccga tggtacgttc ttcgacaatc tgcatcggcg
     6841 cggcaagaga accggcacgc aacagcaaag acgtatcatt ggcttcggct gtcgtcatgc
     6901 ttccggaaat ttccacgcgt ccgccggtaa tggcagtacg gataaccggc gcggttacaa
     6961 cctcggattt tccttggtcg atcaaaacca tcgccatgcg tttgccgaca tttgcggcag
     7021 tcagttcgcc gaaaatgctg ccgcccgcgc tgtccaagct cagactgacg gcaggtgcgc
     7081 ccatttggtc gaaactcggt tgcgcatcgt tgatgttgtc gcccgtcagc tcgacctgtt
     7141 tgctgattag cagagtttcg ggacgatctc cgccgcttga aagcagctca taaccgctcg
     7201 gcacgttgcc ttccaatgcc tcgcgcaact tggcaggatc gtcctccacc atacgcaatt
     7261 ccaaagtcgc ggtacggccg atgatgtctt ttgccttggc agtatcctga acgcccggaa
     7321 gctgcacgac gatacggtct gcacctgact gctggatgac gggttcggcc acgcccaact
     7381 cgttcacacg gttgtgcagg gtagtgatgt tctgtttgac cgcatcggaa cgcactttat
     7441 tgaccgcctc ttccgaaagc gtcaagacga tattgctgcc gtctgaattc agcgttgctt
     7501 caggaaacag cttgcgcaac tgcggcagtg ccttttgcac atcacctgca tcctgcaaag
     7561 ggacggtcag gctgtttcca gcctgacgca ccgtgccgct gcggattttt tcgcggcgca
     7621 gttcgcggcg gatgtcgccc gaataacgtt caaacgtttt ctgcatcgcc gctttcatat
     7681 cgacctgcat ggtgaaatgc acgccgccgc gcaggtccaa acccaaaaac atcggattgg
     7741 ctttgatttt cgccatccat tcggggctgt ccgccaacag gttgagcgcg gtaatatacc
     7801 cttcgcccaa agtgttttcg atgacgtcgc gcgctttaag ctgcgtttct gtgtctttga
     7861 aacgcacttt cagtgaattg tccacaacaa acatcccgtc ggtctgaata cccgcgtttt
     7921 gcagcgcggc atccactttg gattgagtct gttcgttgat gatgatggct tgtcggttgg
     7981 tcgatacctg cacggcgggt gtttcgccga ataggttggg cagcgaatac actgcggcaa
     8041 ccgcaatcgt gaacacaatc agcagatatt tccataaagg ataacggttc atcattgttc
     8101 cttaatggtt ggaaccccac cctttcggtg gtgtcggaat cgggctattt cagaagaggc
     8161 aaaaaccctt cccagccagg caagaccgga aggcggcatc ttgaatatgc cgccctgcgt
     8221 gtcggaacat ggtcaagcct tcggttggaa ttcaaaacaa agtgccgcat tcgggctttc
     8281 cagatgcggc ttgtcggcac aaatcaatcg acttttgcgg caatcgcatt gcgttctact
     8341 tcgacctcga tttttgtacc ctgtccgata tccacggtaa aaaactgttc gccgactctg
     8401 gttaccttac ccttgaaacc tgccgccaag accactttgt cgccgacttt caaggcggca
     8461 agcattgcct gatgcgcttt gaatttcttt tgctgcggac gcatgatcag gaagtagaac
     8521 accaccataa tcaacactaa aggagcaaat tgtgcaacag cttgattcat aatttatccg
     8581 ttctttctaa tatggttgaa aatcgagagg ggtatataat aacataagac cgtaaacaat
     8641 atatcgggtt tgccgtccgt accgaccgta taccgcagcc tgcccgtcca caaacccatg
     8701 tccttgaccc gcctaatctt gaaattctat gcactgttgc gccttttttt gggcaaaaac
     8761 gcccgcaccg catggatttc gcatcccgcc tgtgccgggc acgaacccgg cgcaaaccat
     8821 cccgattcgc ccgaccgcat cctctgcatc gagcaggcat tgcgccgcgc cggtatttgg
     8881 cagcacctcc aaaccataga ggcggaagaa atcagcgata cgcgcctcgc acttgtccac
     8941 tcgagcaaat atctgaaccg tttggaatct tgcctgcccc aaaaaggcaa gattttccgc
     9001 ctggataacg acactgcaat cagcacaggc tcgctgtctg ccgcacactt tgccgccggt
     9061 tcggcagttc aggcagtcga catggtcatg aaccgtaaag catggcatgc cttttgcgcc
     9121 gcccgcccgc ccggacacca tgcgggcagc ggcaaagccg gcggattctg cctgctgaac
     9181 aacgttgccg ccggcgtcat gcatgccatt gccgaatacc gcctgaaacg cattgccgtc
     9241 atcgatttcg atgtccacta cggcgacggt acggcagaaa tattcaaaga cgatccgcgc
     9301 atcctgtttt tcaacctgtt tgaaaccgac cttttcccct tccccgaaaa caacgatatg
     9361 cccgacggcg gcaatatggt gcacctgccc ttgccgccgg gaacgggcag ccgcacattc
     9421 cgcgaagccg tccgcaggca gtggctgccc cgacttgccg cattcaaacc cgaactggtg
     9481 ctgctgtcgg caggattcga cgcacaccgt ctagacgaat cgggcaggct caacctgcac
     9541 gaggcggatt ttgcctggct gacacacaaa atcattcaga cggcatcggg ctgccccggc
     9601 aaaatcgtat ccgtactcga aggcggctac acccttgaac ctctggcaca atctgctgcc
     9661 gagcatatcc gagtgctggc agggctgggc aaatccgatg ccgcaaccgc ctatcagaaa
     9721 acactggacc caacaaaaaa acggtttgcc aaaccgaaaa ccggacaggt gcgccaacct
     9781 acccaatccg accgttac
//
LOCUS       DAWGKF010000069         9678 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.069, whole genome shotgun sequence.
ACCESSION   DAWGKF010000069 DAWGKF010000000
VERSION     DAWGKF010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9678)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9678)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9678
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.069"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..545)
                     /locus_tag="WHR07_001169"
     CDS             complement(<1..545)
                     /locus_tag="WHR07_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ2130385.1"
                     /translation="MFCTVSHLRRLKGHDVLLTAFARALAQCPQLRLNIGGSGQEEQR
                     LKQQAADLGITHAVTFLGALQPEAVLDLMRNSDAFVLASRTETFGVVYIEALSQGLPV
                     IATRCGGAESIVSDGNGYLVPVDDDDALADALIKMYEHHSDFEPARLRENCLNEFGEN
                     AVIGRLIGIFRQAIAEYGKKIR"
     gene            complement(577..960)
                     /locus_tag="WHR07_001170"
     CDS             complement(577..960)
                     /locus_tag="WHR07_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ2130386.1"
                     /translation="MYFFPRFPFIDIDCIRWVCAGLKAFKHYIRENGLPDLIHAHRMN
                     YAGILAQKISQKYGIPYVVTEHSSTITRGLIRPHQWQPMEKAAAHASALLAVSRHFAH
                     VLQHKYGCEWQYLPQHTGRNIQPTV"
     gene            1329..2033
                     /locus_tag="WHR07_001171"
     CDS             1329..2033
                     /locus_tag="WHR07_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248833.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HEZ2130387.1"
                     /translation="MLRSILAASLLAVSFPTAAEALNYNIVEFSESAGVEAVQDTMSA
                     RFQVTAEGRDKNAVNAEFVKKFNNFTRKSKNGSFKTELVSRSAMPRYQYTNGRRIQTG
                     WEERAEFKVEGRDFDALNRFIADVQADAALEYTDFHVSRERRNEVIDQVSKDAVLRFK
                     ARAEKLAGVLGASGYKIVKLNLGHIGSHIAGGGAAQAKMLRAMPMAASVNMEGADSAA
                     PGVEEISISVNGTVQF"
     gene            complement(2097..2663)
                     /locus_tag="WHR07_001172"
     CDS             complement(2097..2663)
                     /locus_tag="WHR07_001172"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HEZ2130388.1"
                     /translation="MSIKSDKWIRRMSEEFGMIDPFEPNQIKEADGKRIISYGTSSYG
                     YDIRCANEFKIFTNINSTIVDPKNFDPKNFVTVEDDCCIIPPNSFALARTVEYFRIPR
                     NVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGVAQVLFF
                     ESDEICETSYKDRNGKYMGQTGVTLPKA"
     gene            complement(2729..3145)
                     /locus_tag="WHR07_001173"
     CDS             complement(2729..3145)
                     /locus_tag="WHR07_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130389.1"
                     /translation="MLKHLAFLLPAMMFALPAASAVLTSYQEPGCTYEGDVGKDGKPA
                     GKGTWRCQDGRNYTGSFKNGKFDGQGVYTVAANREIFIEPFNSDSTKFRNMVLSGTFK
                     KGLAHGRFTVSQNGETLFIMKCENGMIKEVKLPKNK"
     gene            complement(3197..4096)
                     /locus_tag="WHR07_001174"
     CDS             complement(3197..4096)
                     /locus_tag="WHR07_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HEZ2130390.1"
                     /translation="MWFKQISFYPLNKEKLPEADVLADKLAEAEFTHCQGLDWFSEGF
                     TAPVSFSPELVFPADFTLRVALKKEEKVLPAGVIRDILEEKVAEIQNNEARNVGRKEK
                     QELKEQITDDLLPRAFTRSSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLE
                     ASLPNTKQSPSSLMTGWLLQGHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVV
                     QHVKNGKTVTQLGLVWREQIAFILTQDFTLKRIQYLDVLQEEAESNGDDAAGLAFASQ
                     ILMAESVSIMLEELVSYLGGWQD"
     gene            complement(4127..5584)
                     /gene="der"
                     /locus_tag="WHR07_001175"
     CDS             complement(4127..5584)
                     /gene="der"
                     /locus_tag="WHR07_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEZ2130391.1"
                     /translation="MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGH
                     GKVGSKPYLVIDTGGFEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKI
                     IADRLRQSPRPVYLAVNKGEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEIL
                     ENFPEPEVEEADAKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDF
                     EREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDA
                     TIAGFALEAGRALVVAVNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGI
                     DGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPV
                     IVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRIQYNVSENPYENADDKPKKKPLR
                     RVSLSNRIEKREGRKEEKNRFKKKTKVSVKKQFSK"
     gene            complement(5734..6363)
                     /locus_tag="WHR07_001176"
     CDS             complement(5734..6363)
                     /locus_tag="WHR07_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfgM family protein"
                     /protein_id="HEZ2130392.1"
                     /translation="MAAHLEEQQELDNFKYFWKTTGKWLFALLILAALGYLGYTVYQN
                     RAASQNQEAAAVLANIVEKAQNKAPQSEINAELTKLQQSYPHSISAAQATLMAAATEF
                     DAQRYDVAEGHLKWVLSNQKDSLIQALAAQRLGVVLLQQKKYDAALAALDTPVEADFS
                     PLLMETKGDVYAAQGKSQEALKNYGQALEKMPQDSVGRELVQMKLDSLK"
     gene            complement(6364..7659)
                     /gene="hisS"
                     /locus_tag="WHR07_001177"
     CDS             complement(6364..7659)
                     /gene="hisS"
                     /locus_tag="WHR07_001177"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HEZ2130393.1"
                     /translation="MAQKIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVNRWTRAYG
                     YQQIRTPIVEQTGLFVRSIGEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVE
                     HNLLYNSPQKLWYMGPMFRRERPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLW
                     EKLGIREYLTLEINSLGNREERAAHRAALVEYLTRYEDKLDEDSKRRLKTNPLRVLDT
                     KNPDLQEICNAAPRLVDYLGEASQNHYARFKAMLDGLGIQYIENPRLVRGLDYYNQTV
                     FEWTTDKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAMGIERLLLLVSEYGSLEVNA
                     APDVYAMHQGERADLQVMKYAQALRAQGFNVMQHSGYQSLKAQMKKADNSGARFALIV
                     AQDELANGTVTLKDMNGAHGQQTVAAEDLTHTLQQWKNA"
     gene            complement(7785..8327)
                     /locus_tag="WHR07_001178"
     CDS             complement(7785..8327)
                     /locus_tag="WHR07_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEZ2130394.1"
                     /translation="MQSWKARRDFNIVKQDLDFSCGAASVATLLNNFYGQTLTEEEVL
                     KKLDKEQMRASFEDMRRIMPDLGFEAKGYALSFEQLAQLKIPVIVYLKYRKDDHFSVL
                     RGIDGNTVLLADPSLGHVSMSRAQFLDAWQTREGNLAGKILAVVPKKAETISNKLFFT
                     HHPKRQTEFAVRQIRQARAE"
     gene            complement(9444..9644)
                     /locus_tag="WHR07_001179"
     CDS             complement(9444..9644)
                     /locus_tag="WHR07_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130395.1"
                     /translation="MQLICADWTGIGNFMKTFEKTWSAQYRDMEISVRNFWNLERTGA
                     EVYINGRRVYHNEAEMASASLR"
BASE COUNT         2269 a         2324 c         2470 g         2615 t
ORIGIN      
        1 cgtattttct taccgtattc tgcgattgcc tgtcggaaaa tgccgatcaa cctgcctata
       61 acggcatttt cgccaaattc gttcagacag ttttccctaa gtcgggcagg ttcaaaatca
      121 gagtggtgtt catacatttt gatgagtgcg tcggcaaggg catcgtcgtc gtcaacagga
      181 accaaatatc cgttgccgtc tgaaacaata gattccgcac cgccgcagcg tgttgcaatg
      241 acgggcaatc cttgggacag tgcttcgata tagactacgc cgaaggtttc ggtgcggctg
      301 gcaaggacga atgcgtcgct gttcctcatc aaatccaaga ctgcttcggg ctgcaatgcg
      361 cccaaaaatg taacggcatg ggtaatgccc aagtctgccg cctgctgttt cagccgctgt
      421 tcttcctgtc cgctgccgcc gatgttcagg cgcagttgcg ggcattgtgc caacgcccgg
      481 gcaaaggcag tgagtaggac atcgtgtcct ttgagacggc gaaggtgcga gacggtgcag
      541 aacacgaaat gcggtttgtt gtttttttct ctttgttcaa acggtcggtt gaatattccg
      601 cccagtatgt tgggggaggt actgccattc gcagccgtat ttgtgttgca ggacgtgtgc
      661 gaaatggcgg ctgacagcga gcagtgcgga ggcgtgcgcc gctgcttttt ccatcggctg
      721 ccattggtgg ggacggatca gaccgcgcgt gatggtgctg ctgtgttccg tgacgacata
      781 ggggatgccg tatttttggg aaattttttg ggcgagtatg ccggcatagt tcatgcggtg
      841 ggcgtgaatc aggtcgggca gcccgttttc gcggatgtag tgtttgaaag ctttcaaacc
      901 cgcacacacc cagcggatgc agtcgatgtc gatgaacgga aagcggggga agaaatatat
      961 gccgtgccat gcatagatgt ccaaaccgct ttgccgatat tttgcaaaac cgtaaggccg
     1021 gtcaggatgc ttgctgtttc tttccgcaag tagcggaaca tcggtgcaag cacggcggtt
     1081 ttgatgcctt tcctctgcaa tgccagtgcc tgattttgaa aaaaatcccg tccacatcct
     1141 gttcggattg cggataccat gaggggatga cgaggacgtg caagggttcg ggcatagtgg
     1201 gattccgtat cggaaaggcg gttattataa gacagacgca gaccgaatat ttaaattgtt
     1261 gccttacgct aatgcaattt agcgcgccga tatgctagat tggcggtttt ataagtaagg
     1321 atacggatat gttgcgttct attttggcgg cttccctgct ggcggtatct tttccgacgg
     1381 cggctgaagc attgaattac aatattgtcg aattttctga atcggcgggt gtcgaggcgg
     1441 ttcaggatac aatgtccgca cgtttccaag tgacggcgga aggacgggac aaaaatgccg
     1501 tcaatgccga gtttgttaaa aaattcaaca atttcaccag aaaatcaaaa aatggtagct
     1561 ttaaaaccga attggtatcg cgcagtgcga tgccgcgcta tcaatatacc aacggcagac
     1621 gcattcaaac aggttgggag gagcgtgcgg aatttaaggt cgagggtagg gattttgatg
     1681 cgttgaaccg ttttattgcc gatgttcagg cagatgccgc gttggaatat acggatttcc
     1741 atgtgtcgcg cgaacgccgc aacgaggtca tcgatcaggt cagcaaggat gccgttttgc
     1801 gtttcaaggc gcgtgccgaa aagttggcgg gcgttttggg tgcgtccggt tataaaatcg
     1861 tcaaattaaa tttgggacac atcggcagcc atatcgcggg agggggagct gctcaggcaa
     1921 aaatgcttcg tgccatgccg atggcggcaa gcgtcaatat ggagggtgcg gattccgccg
     1981 cgcctggtgt ggaggaaatc agcatcagcg tcaatgggac ggttcagttc tgatttgagg
     2041 tgaacggcaa atgccgtctg aaacccgacg ataagggttc agacggcatt tatatttcag
     2101 gctttgggca gggtaacgcc ggtttgcccc atatatttgc cgttgcggtc tttgtatgag
     2161 gtttcgcaga tttcgtcgct ctcgaagaag aggacttgcg ccacaccttc gcctgcgtag
     2221 attttggcgg gcaggggggt ggtgttggaa aattcgaggg taacgtagcc ttcccattcc
     2281 ggttcgaacg gggtaacgtt gacgataatg ccgcagcggg cgtaggtgga tttgcccaag
     2341 cagacggtca ggacgttgcg cgggatgcgg aaatattcga ccgtgcgcgc cagtgcgaag
     2401 gaattgggcg ggatgatgca gcagtcgtct tcaacggtaa cgaagttttt cgggtcgaag
     2461 tttttgggat cgacgatggt gctgttgatg ttggtgaaga ttttaaattc gtttgcgcag
     2521 cggatgtcgt agccgtagct ggacgtaccg taggagatga tgcgtttgcc gtcggcttct
     2581 ttgatttggt tcggctcgaa agggtcgatc atgccgaatt cttcgctcat tcggcgtatc
     2641 catttgtcgg acttgatgct cataatgttt tccttgtttc ttgcagtgtt cggacaaagc
     2701 attgggggat gccgtctgaa aacggggctt atttgttttt gggcagcttc acttctttaa
     2761 tcatgccgtt ttcgcatttc ataatgaaga gggtttcgcc gttttgcgag acggtaaatc
     2821 tgccgtgtgc caagcctttt ttgaatgtgc ccgagagtac catgttgcgg aatttggtac
     2881 tgtcggaatt gaacggttcg ataaatattt cgcggttggc ggcaacggta taaacgcctt
     2941 gtccgtcgaa tttgccattt ttaaacgaac cggtatagtt gcgcccgtct tggcagcgcc
     3001 atgtgccttt gccggcgggt ttaccgtctt tgccgacatc gccttcgtag gtgcagccgg
     3061 gttcttgata ggaagtcaga acggcggacg cggcggggag ggcgaacatc atggcgggca
     3121 gtaggaatgc gagatgttta agcataaggg ttattccatt ggattttggc tgacggtata
     3181 aaagccgtct gaaaaatcaa tcttgccagc cgcccaaata ggaaaccagc tcttccaaca
     3241 tgatgctgac ggattccgcc atcaggattt gcgaggcgaa ggcgagaccg gcggcatcgt
     3301 cgccgttgct ttcggcttct tcctgcaata cgtcgaggta ttggatgcgc ttgagtgtga
     3361 agtcttgagt gaggataaag gcgatttgtt cgcgccaaac caaaccgagc tgggttacgg
     3421 ttttaccgtt tttgacgtgt tgaaccactt cgtcggcggt taaatcttgt ttggatactt
     3481 tgacgacggg aacaatatcg cccgtgcctt tgagttcgca atcgctgtcc aattcaaaac
     3541 cgccttcgca atgcccttgc aacagccagc cggtcatcag ggaagagggc gattgtttgg
     3601 tattcggcag tgaggcttcc aaaccgccca aagcttcgcg cagcttggtc aggatgtttt
     3661 ctgctttggc ggaagccgcg ttattgacga gcaggtagcc gtggcgggtg ttaaacaccg
     3721 cttctgtacg gctgctgcgg gtaaacgctc ggggcagcag gtcgtctgta atttgctctt
     3781 taagctcttg tttttctttg cgaccgacat tgcgggcttc attgttttgg atttccgcta
     3841 ccttctcttc caaaatatcg cggatgacgc cggcaggcag gactttttcc tcttttttca
     3901 gggcgacgcg caaggtaaag tcggcaggaa aaacgagttc cggggagaat gaaaccggtg
     3961 cggtaaagcc ttcgctgaac cagtctaagc cttggcaatg ggtaaattca gcttcagcaa
     4021 gtttgtcggc aagtacgtcc gcctcaggca gcttttcttt gttgagcgga taaaaactaa
     4081 tctgcttgaa ccacataatg tttcctgttg tttgaaatgt cgggaattat ttgctgaatt
     4141 gttttttcac actgactttg gttttcttct tgaagcggtt tttctcttct ttgcggcctt
     4201 cgcgtttctc aatacggttg ctcaggctga cgcggcgcag cggttttttc ttcggtttgt
     4261 cgtcggcgtt ttcatacggg ttttctgaaa cattgtattg aatccgcaac ggcgtgcctt
     4321 gcaggttgaa ggctttgcgg aacgtttggg tcagatagcg cgtatagctg tcggaaatcg
     4381 cgtgcagcga attgccgtgt accacaatta cgggagggtt catgccgcct tggtgggcat
     4441 aacgcatttt cggacgcacc aagccggcac gcggcggttg ctgacgctcg attgcgcttt
     4501 gcaggacgcg cgtgattttc ggcgtcggca tcttaatcat cgccgcgttg taggcagcct
     4561 gaatgctgtc aaacaaaccg tctataccgc gctctttcaa tgcggaaata aagtggaact
     4621 tggcaaaatc gaggaaatac agtttgcggt tgatatcgcg tttcacttgc tcgcgacgtt
     4681 cttcgctgat gccgtcccat ttattgaccg ccaccaccaa agcacggcct gcctccaaag
     4741 cgaaacctgc aatcgtcgca tcttggtcgg cgatgtcctg ctgcgcgtcc aataccaaaa
     4801 cagcgacgtt tgccgcttca accgcctgca tcgctttgat aacggagaat ttttccactg
     4861 cttcatccac tttgccgcga cggcgcacac ctgcggtatc gatgatggta aacggtttgc
     4921 cttcgcgctc gaaatcgata tggatactgt cgcgcgtcgt gccggccata tcgaaggcaa
     4981 tcacgcgctc ttcgccgaga atggcgttta ccagcgtgga tttgccgacg ttcggacgac
     5041 cgatgacggc aaaaacggga tgttttgcat cggcttcttc gacttccggc tcggggaagt
     5101 tttctaaaat ttcttcaatc aggtaataca cgccgtcgcc gtgcgcaccg gaaataacat
     5161 aagggtcgcc caaagcaagt tcgtagaact cggcggcaag cacggccctg ttgccgcctt
     5221 cgcctttgtt taccgccaga taaacagggc gcgggctttg gcgcaaacgg tcggcaatga
     5281 ttttgtcttg cggggtcaga ccggtgcggc cgtccaccaa aaatacgacg gcatcggctt
     5341 catcgacagc ctgcaaggtt tgttttgcca tttcgtgcaa aatgccgctg tccacaaccg
     5401 gctcgaaacc tccggtatcg atgaccaaat aaggtttgct gccgactttg ccgtgtccgt
     5461 aatggcggtc gcgcgtcaga ccgggcaggt cgtgtacgag cgcgtctttg gtgcgcgtca
     5521 aacggttgaa taaagtagat ttgccgacgt tggggcggcc gacaagcgcg atggttggtt
     5581 tcatgattgg gtctttctgt gtcaagtgcc gttcgggaga actgaacaca agcaggtgtc
     5641 cgttgggaca cggcagatgg ttttacggga attgccgtag gatagtgttg tctgaaatgc
     5701 cgtctgaaga gagggtggca tttcagacgg catttatttc agcgaatcga gtttcatttg
     5761 aaccaattca cgaccgacag aatcttgagg cattttttct aaagcctgac cgtagttttt
     5821 taaggcttcc tggctttttc cctgtgcggc atagacatcg cctttggttt ccatcagcag
     5881 gggggagaag tccgcttcaa ccggcgtgtc gagcgcggca agcgcggcat cgtatttttt
     5941 ttgttgcaac aacacaacgc ccagacgctg cgccgccaac gcttgaatca ggctgtcttt
     6001 ttggttggac aacacccatt tcaaatggcc ttcggcaaca tcgtaacgct gcgcgtcaaa
     6061 ttcggttgcc gccgccatca gcgtggcttg ggcggcggaa atagaatgcg ggtagctttg
     6121 ttggagtttg gtcaattcgg cattaatttc gctttgcggg gctttgtttt gcgccttttc
     6181 cacgatgttt gccagcaccg ccgccgcttc ctgattttgg gaagccgcac ggttttggta
     6241 aaccgtgtat cccaagtagc cgagtgctgc caaaatcagc agggcaaaca gccatttgcc
     6301 cgtggttttc caaaaatatt taaagttgtc taactcttgt tgttcttcga gatgggctgc
     6361 catttatgcg ttcttccatt gttgtaaagt atgggttaaa tcctcggcgg cgacagtttg
     6421 ctgaccgtgt gcgccgttca tgtctttgag cgtaaccgta ccgttcgcca gttcgtcttg
     6481 cgcgacaatc agggcaaagc gcgcgccgct gttgtcggct tttttcattt gcgctttcag
     6541 gctttgatag ccggaatgct gcattacatt gaaaccttgc gcgcgcaagg cttgcgcgta
     6601 tttcatcacc tgcaagtccg ccctttcgcc ttggtgcatt gcatagacat caggcgcagc
     6661 gttcacttcc agcgagccgt attcgctcac caaaagcagc agccgttcga tgcccatcgc
     6721 aaagccgatg gacggcgcag gtttgccgcc aagttcctca atcaaaccat cgtaacggcc
     6781 gccgccgcac acagttgcct gcgcgccgag tttgtcggtc gtccactcaa aaaccgtctg
     6841 attgtaataa tccaaaccgc gaaccaagcg cggattttca atatattgga tacccaaacc
     6901 gtccaacatc gccttgaagc gtgcatagtg gttttgcgaa gcctcgccca aataatccac
     6961 caaacgcggc gcggcgttgc agatttcctg caaatcaggg tttttcgtat ctaaaacacg
     7021 caaaggattg gttttcagac ggcgtttgct gtcttcgtcc aatttatctt catagcgtgt
     7081 caaatattca accaacgccg cacggtgtgc cgctcgctcc tcacggttgc ctaagctgtt
     7141 gatttccaaa gtcaggtatt cgcggatacc caatttttcc cacaagtcgg cagacatcgc
     7201 gatgatttcc gcatcgatat ccggcccttc aaaacccaaa gcctcgatac cgacctgatg
     7261 gaattgacga taacggcctt tttgcggacg ctcgcggcgg aacatcggcc ccatatacca
     7321 cagcttttgc gggctgttgt acagaaggtt gtgttcgacc accgcacgca gacaagaagc
     7381 cgtaccttcc ggacgcaggc tcaaactcaa agaatcgttt gaatcggaaa aggtgtacat
     7441 ttccttgccg accacatcgg tttcctcgcc gatggagcgg acaaacaaac cggtttgctc
     7501 gacaatcggc gtacggattt gctgatagcc gtaagcgcgc gtccagcggt ttaccgtatc
     7561 ctcaaacgcc tgccaaaacg cagccgtcag tttgaaatct ttttgctcga caggcagaag
     7621 gtcgttcatg cctttgacgg attggatttt ttgtgccatt tcaagtaaga atgcttaaat
     7681 caaattgcgg gcgattatag cggattttta agggtttgtg aggttggggg tggtttgcgg
     7741 acgggtaaaa tgccgtctga aacagttttc agacggcatt tgacttactc tgcacgtgct
     7801 tgcctgattt gtcggactgc aaactctgtc tgccgcttgg gatgatgtgt gaaaaacaat
     7861 ttatttgaaa ttgtctcggc ttttttcggc acgaccgcca aaatcttacc tgccaaattt
     7921 ccctcacggg tttgccaagc atccaaaaac tgcgccctgc tcatcgaaac atgacccagc
     7981 gacgggtcgg caagcaaaac cgtattgccg tctataccgc gcaataccga gaaatgatca
     8041 tccttacggt atttcagata cacgatgacg gggattttca actgcgcgag ctgctcgaaa
     8101 gacagggcat agcctttcgc ttcaaaaccc aaatctggca taatgcgccg catatcctca
     8161 aacgacgcgc gcatctgctc cttatccagc tttttcaaca cttcttcttc cgtcagcgtt
     8221 tgcccgtaaa aattgttcaa aagcgtcgcc accgaagccg ccccgcagga aaaatccaaa
     8281 tcctgcttta caatattgaa atcccgccgc gctttccaac tctgcacttt gatttttccg
     8341 taaacaacag gattatcgtt aaacatcggt gcagcattca gacgataaga taaagaaacg
     8401 acaacacacg ccaacagaaa aacatatttg aacttcatca tattgtccac ataaagggca
     8461 gcctgaaaat ctttcaggct gcccttgtca aattattcct agctttcggc ttttttggca
     8521 aaccaaacaa tccgattacc cgcataatac tttccattta ttgaaatccg acaagccgcg
     8581 cccaaaaatg ccatgcactg tcgatttccg cagcaatctt tgtaccgttt tcttcaaatt
     8641 ccaaatattc acccaataat aaacttgaaa cagaacgcgt gggcagcaag tgcccaccct
     8701 acgcttattc aaataatttg attaaataaa gaataaagaa aatgcatcag gaacaaaatt
     8761 ataatctgcc acctgactca caccgctttt aaagtaaggg gcatcaaaat caaaaccgca
     8821 aaaaaaataa tttttgcatt gatttttaat agatttaaaa ttcgaatata gtgtttctcc
     8881 agatttaaaa agtttatctt tatctatata tttgatgctt tccctatcca aaataaatat
     8941 tcaaacatta aaaaatcatt acatgaccaa gccaaatcat aaatttgatt caaatgggta
     9001 tcataaagat aaaaataata aggtttggga acaggtaaaa tatttaatgg aaaaggagga
     9061 ctaattttct taatatctga tgactgatat ccatatcttt ctatattctt aaaaatttca
     9121 tctttcttaa gataacaaga cattctgaag ataacaagac attctgacaa tcacaacctg
     9181 ttcatcggat atattatcta tttgcatggc gcgtataaca cgccatgcct gattaaaatt
     9241 agtctccctt accttagaat ctattatctt ttccaaagat gaaaatgccc cttatcttga
     9301 actctccagt tagaacctgg aagtttcgta cctcttaaat gtgtattaat atttcttata
     9361 gtttcattaa aatgccacgc gctgccgatt tcaacggtaa ttttcgtacc gctttcttca
     9421 aattccaggt attcccccat tagctaacgc aaagaagcag acgccatttc ggcttcgtta
     9481 tgataaaccc gccttccgtt gatatagact tccgcccctg tccgctccaa attccaaaaa
     9541 ttccgtactg aaatttccat atcccgatat tgtgcagacc atgttttttc gaaggttttc
     9601 ataaaatttc ctatacctgt ccaatcggca catatcaatt gcattattat agtggattaa
     9661 caaaaatcag gacaaggc
//
LOCUS       DAWGKF010000070         9557 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.070, whole genome shotgun sequence.
ACCESSION   DAWGKF010000070 DAWGKF010000000
VERSION     DAWGKF010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9557)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9557)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9557
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.070"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            41..196
                     /locus_tag="WHR07_001180"
     CDS             41..196
                     /locus_tag="WHR07_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020424398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130396.1"
                     /translation="MHKLCLATSRSDDFIRKTAASGTISNRPTEDGILSTRPAAYAAE
                     EPLYQAS"
     gene            205..1254
                     /locus_tag="WHR07_001181"
     CDS             205..1254
                     /locus_tag="WHR07_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEZ2130397.1"
                     /translation="MSKQPTSKRQWRDGAAPSAKKTAKPFKSKARPKGETRKTATQAY
                     GQKASDGIKPQNAPKQRAAKAKKLVVRNPNQKIMEHARDLKERRSDLSRMEPERLQKV
                     LAASGVGSRREMEEWITNGWITVNGKTAQLGDKVTPDDHVTVKGSIIKLKWADRLPRI
                     ILYYKQEGEIVSRDDPQGRVSIFDRLPQAASSRWVAIGRLDINTSGLLILTTSGELVQ
                     RFAHPSFEVEREYAVRVLGGLTGEQMRVLTEEGVMLEDGLAKVERIREQGGEGANKWY
                     NVVIKEGRNREVRRIFESQGLTVSRLVRVGFGPIGLPNRLKRGQFYELNPAEVANILK
                     WAEMLLPGEYRRKKA"
     gene            complement(1323..2864)
                     /locus_tag="WHR07_001182"
     CDS             complement(1323..2864)
                     /locus_tag="WHR07_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HEZ2130398.1"
                     /translation="MKFLDREASIAKPGFNRWLVPPAALAVHLAIGQIYAYSVFNAPL
                     TKLIGITESAAGDWKLTTVGWIFSIALAMLGASAALFGTWMERVGPRKAIFAAACCFS
                     LGFFVSAFGVRTHNLFLLYLGNGVIGGVGLGLGYIGPVSTLMKWFPDKPGMATGLAIM
                     GFGGGAMLASPLSVSLMNAFSNAASVGVAETFAVLGLLYLALMMFGAFTIRVPADGWK
                     PEGYTAPKTQNKLVSSNHVNVSQAMKTPQFWLLFWVLCLNVTAGIGVLGQASVMIQEL
                     FSETSIGRQAAVGAGAAAGFVSLLSLFNMGGRFLWSSVSDKIGRKNTYTIFFVLGSLL
                     YFAVPSIGEGGSKALFIIGFCVIISMYGGGFAAIPAYLKDLFGTYQVGAIHGRILLAW
                     STAAVIGPVLVNYIRQSQIDSGIPAAQAYGVTMYIMACLLIIGLLCNLAVKSVHEKHH
                     EKDIKTAAHSGNPDDETAISDAYLVGEKVSGGGISVWWRWALAVIPLAYGVVMVFVKA
                     LDLFS"
     gene            complement(3157..4512)
                     /locus_tag="WHR07_001183"
     CDS             complement(3157..4512)
                     /locus_tag="WHR07_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEZ2130399.1"
                     /translation="MSDFFHSDVLSVSELNAFAKSILENHLAGLWIAGEVSNLTRAAS
                     GHYYFSLKDSRAQVRCAMFKGAAARLAKPLKEGDHIEVAGKISIYETRGEFQITVNEV
                     RLKGLGQLYEAYERLKAQLQAEGAFAAERKKPLPARPQCIGIVTSLAAAALRDVVTTL
                     KRRAPEIPVIVYPTPVQGTGSELQIAQAIKTASQRAECDVLIVCRGGGSIEDLWAFNE
                     EPVVRAIEACTVPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQ
                     AQGRLKTVLEQRYFDASQKLDWLARQIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRA
                     HTARFERQTQALQHYRPDVSVCKNNIVRLQTALPAAFSQLLTHRRQSLTAQAALLEAV
                     SPQHILERGFSVVKDTRGQVIRNADVLKQGQKLHITFADGETDVRVSKEQGQQDLFDC
                     I"
     gene            4709..5530
                     /gene="nadE"
                     /locus_tag="WHR07_001184"
     CDS             4709..5530
                     /gene="nadE"
                     /locus_tag="WHR07_001184"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HEZ2130400.1"
                     /translation="MMRIFSTGGKMDTQAVITHIARWLDEYAARANAKGFVVGVSGGI
                     DSAVVSALAARTGRPTLLLDMPIRQHPDQLERARLHIRNLQRQYANVSAQTVDLTDTF
                     QTFEQTVGIHQTAFDNQPLSLANARSRLRMLTLYYYGQIHGLLVTGTGNKIEDFGVGF
                     FTKYGDGGVDISPIADLTKTQVYRLAEALGVDEAIQKAPPTDGLWDTERTDEEQMGAS
                     YPELEWAMGVYGTRKPEDFEGRQREVLEIYTRLHRAMQHKINPIPVCRIPPELLG"
     gene            complement(5598..6071)
                     /locus_tag="WHR07_001185"
     CDS             complement(5598..6071)
                     /locus_tag="WHR07_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEZ2130401.1"
                     /translation="MTDFSVWETAPFGATVDHILQRYHNVHRAQFEELVPLAQKVAQV
                     HADTFPAEIAGLLAYMQNELLMHMMKEERMLFPMINQGVGRGAAMPISVMMHEHEEHD
                     RAIARLKELTDNFQPPEGACGSWTRLYALAKEMVEDLNDHIHLENDILFARVLDS"
     gene            6369..6701
                     /gene="trxA"
                     /locus_tag="WHR07_001186"
     CDS             6369..6701
                     /gene="trxA"
                     /locus_tag="WHR07_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HEZ2130402.1"
                     /translation="MSSELIVHTSDAAFEKDVLNADIPVLLDFWAPWCGPCKMIAPIL
                     DDIAAEFEGRLKVVKINIDDNEATPSRFGVRGIPTLMVFKNGEVVATKVGALAKGQLT
                     AFVEASIA"
     gene            complement(6754..7701)
                     /locus_tag="WHR07_001187"
     CDS             complement(6754..7701)
                     /locus_tag="WHR07_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ2130403.1"
                     /translation="MTDITPFANRLGKNIKHLMKWAKRNGIEAWRIYDRDIPQFPFAA
                     DVYGDRIHLQEYDTGWLMRPEEYEAWLAEVLEAVAFVTGFEPEQIRLKRRERQKGLQQ
                     YEKTGKAGDDFVITENGRKFWVNLDKYLDTGLFLDHRNTRKKVGETAAGKRFLNLFSY
                     TGSFTVYAATGGAASSETVDLSNTYLDWARRNFELNGIDTERHKIVRADVFQYLQTAY
                     GEGRRFDLIVMDPPSFSNSKKMSDILDIQRDHKKLIDGAVKLLASDGILYFSNNLRSF
                     VLDDLVSEQYAVKDISKQSVPEDFRNKKIHRCWEIRHKS"
     gene            8029..9417
                     /locus_tag="WHR07_001188"
     CDS             8029..9417
                     /locus_tag="WHR07_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEZ2130404.1"
                     /translation="MSIKFADLNLDKNILSAVSSEGYESPTPIQAQAIPFALEGRDIM
                     ASAQTGSGKTAAFLLPTLQRLTKRSEKPGKGPRALVLTPTRELAAQVEKNALAYAKNM
                     RWFRTVSIVGGASFGYQTRALSKPVDLIVATPGRLMDLMQSGKVDFERLEVLILDEAD
                     RMLDMGFIDDIETIVEATPTDRQTLLFSATWDGAVGKLARKLTKDPEIIEVERVDDQG
                     KIEEQLLYCDDMRHKNRLLDHILRDANIDQCVIFTSTKAMTEVIADELYEKGFAANCL
                     HGDMPQGWRNRTLMDLRKGRCKILVATDVAARGIDVPTITHVINYDLPKQAEDYVHRI
                     GRTGRAGRTGIAITFAEVNEYVKVHKIEKYINRKLPELTIEGMEPTRKRKSAGGKPKG
                     KGGWGDRKSGGRRGDHKPGKEGFGGKTRGEGFKKEGFKKDGFKKTGEGFKGKRKAGDS
                     FAGRGERRYKDR"
BASE COUNT         2333 a         2660 c         2533 g         2031 t
ORIGIN      
        1 ttgaaagatt ctacccccgc acgcaaaccg atttcaaccg ttgcacaaac tttgcctcgc
       61 cacaagccgc agcgacgatt tcatccgcaa aaccgccgca tcaggtacaa tatcgaaccg
      121 tccgactgag gacggcattt tatcaacccg tcctgccgca tacgccgcag aagaaccgct
      181 ttatcaagcg agttaggaaa aatgatgtcc aaacagccca ccagcaaacg ccaatggcgc
      241 gacggcgcag ccccgtctgc caagaaaacc gccaaacctt tcaaaagcaa agcccgtccc
      301 aaaggcgaaa cgcgcaaaac cgccacccaa gcttacggac aaaaagcttc agacggcatc
      361 aagccgcaaa acgcccccaa acagcgcgcc gccaaagcca aaaaactcgt cgtccgcaat
      421 cccaaccaaa aaattatgga acacgcgcgc gatttgaaag aacgccgcag cgacctgtcg
      481 cgcatggaac ccgaacgcct gcaaaaagtg cttgccgcgt ccggcgtcgg ctcgcgccgc
      541 gaaatggaag aatggattac caacggctgg ataacggtca acggcaaaac cgcgcaactg
      601 ggcgacaaag ttacccccga cgaccacgtt accgtcaaag gcagcatcat caagctcaaa
      661 tgggcggacc gcctgccgcg catcatcctg tattacaaac aagaaggcga aatcgtttcc
      721 cgtgacgacc cgcaaggccg cgtcagcata ttcgaccgcc tgccgcaggc cgccagcagc
      781 cgctgggtcg ccatcggacg cttggacatc aacaccagcg gacttctgat tcttaccacc
      841 tccggcgaac tcgtccaacg tttcgcccac cccagcttcg aagtcgaacg cgaatacgcc
      901 gtgcgcgtct tgggcgggct gaccggcgaa caaatgcgcg tcctcaccga agaaggcgtg
      961 atgctcgaag acggcttggc aaaagtcgaa cgcatccgcg aacaaggcgg cgaaggcgcg
     1021 aacaaatggt acaacgtcgt gattaaagaa ggccgcaacc gcgaagtgcg ccgcattttt
     1081 gaaagccaag gactcaccgt cagccgcctc gtgcgcgtcg gcttcggtcc catcggactg
     1141 cccaaccgcc tcaaacgcgg gcagttctac gaactcaacc ccgccgaagt cgccaacatc
     1201 ctcaaatggg cggaaatgct gctgccgggc gaataccgcc gcaaaaaagc ctaaacccgc
     1261 caaaacacaa aaatgccgtc tgaaacatct gctgtttcag acggcatttt attcgggcgt
     1321 tttcaggaga aaaggtcgag tgctttgaca aagaccatca ccacgccgta ggcgagtggt
     1381 atgacggcca atgcccaacg ccaccagacc gatatgccgc cgccggaaac tttttcgccc
     1441 acaaggtaag cgtcggatat ggcggtttcg tcgtcggggt tgccgctgtg tgcggcggtt
     1501 ttgatgtctt tttcgtggtg tttttcgtgt acggatttga cggcgaggtt gcacaacaaa
     1561 ccgataatca gcaggcacgc catgatgtac atggttacgc cgtatgcctg tgccgccggt
     1621 atgccgctgt cgatttggct ttggcgtatg taattgacca gtaccgggcc gatgacggcg
     1681 gcggttgacc aggccagcag gatgcgcccg tgaatcgcgc cgacctgata ggtgccgaac
     1741 aggtctttca ggtaggcggg aatggcggca aatccgccgc cgtacatgga aataatcacg
     1801 caaaagccga tgatgaacag ggctttgctg ccgccctcgc cgatggaggg aacggcgaaa
     1861 tacagcagcg agccaagtac gaagaagatg gtgtaggtgt ttttgcgtcc gattttgtcg
     1921 gaaacgctcg accacaaaaa gcgtccgccc atgttaaaca ggctcaggag gctgacgaag
     1981 cctgccgccg cacctgcgcc gactgctgcc tgcctgccta tggaggtttc ggaaaagagt
     2041 tcctgaatca tcacggatgc ctgacccaat acgccgatgc cggcggttac gttcaggcac
     2101 aatacccaga acaacagcca aaactgcggc gttttcatgg cttgggacac gttgacatga
     2161 ttactgctga ccagcttgtt ttgcgttttc ggcgcggtat agccttcagg tttccagccg
     2221 tcggcaggta cgcggatggt aaacgcgccg aacatcatca gtgcgaggta aagcaggccc
     2281 aatacggcaa aggtttcggc aaccccgacc gaagcggcgt ttgaaaaggc gttcatcagt
     2341 gatacggaaa gcggagaggc cagcattgcg ccgccgccga aacccataat cgccaaaccg
     2401 gtcgccatac ccggcttgtc gggaaaccat ttcatcagtg tggaaaccgg cccgatgtag
     2461 cctaagccta agcctacgcc gccgatgacg ccgttgccca aatagagcag gaagaggttg
     2521 tgcgtacgca cgccgaatgc ggatacgaag aagcccaggc tgaaacagca ggcggcggca
     2581 aatatggctt tgcgcggacc tacccgttcc atccatgtgc cgaacagggc agccgacgcg
     2641 cccagcatcg cgagtgcgat actaaaaatc caacctacgg tcgtcagctt ccaatctccg
     2701 gccgccgatt cggttatgcc gataagtttg gtcagcggcg cgttgaatac ggaataggcg
     2761 taaatctgcc cgatggcaag gtgcaccgcc aatgctgcgg gcggtacgag ccaacggttg
     2821 aaacccggct tggcaatgct tgcctcacgg tctaaaaact tcataacatc ctctttctgt
     2881 cagttgaaaa ataaaatttc atttgcccaa tggaaactta ttgaaaatta taaaaaaata
     2941 tcggatcggt tttttatccg ccccaagatg ccccgtctga aacatttcgg gtgtacggaa
     3001 aggtttctgt tttttccgac aaattcctgc ggcttttcgc ttccggattc ccgctttttc
     3061 aggaatgacg aattaaagat tatcttaagg tcaagggact ggattcccgc tttcgcggga
     3121 atgacggcgg agggggagcg gtttttccga ttgggtttaa atgcaatcga acaaatcctg
     3181 ctgcccttgt tctttgctta cgcgcacgtc ggtttcgccg tcggcgaagg taatgtgcag
     3241 cttctgcccc tgcttcaaaa catcggcgtt gcggatgact tgtccgcgtg tatctttgac
     3301 gacggaaaag ccgcgttcca aaatgtgctg cggcgaaacg gcttcgagca atgcggcttg
     3361 ggcggtcagg ctttggcggc ggtgggtaag cagttggctg aaggcggcgg gcaatgccgt
     3421 ctgaaggcgg acgatgttgt ttttgcaaac ggaaacatca ggacggtaat gttgcagggc
     3481 ttgggtttgg cgttcaaaac gggcggtgtg ggcacggagg ttttgcttca tagagtaaga
     3541 cagcgtttgc gccagcttgc cgattgaagc gcgctgctca tcaagttttt ggcgcggatg
     3601 acggatttgc cgcgcaagcc agtcgagttt ttggctggca tcgaaatagc gttgttccaa
     3661 aacggttttc agacggcctt gcgcctgagc gagacgatgt agcgattctt ggcggttggg
     3721 gctgaccagc tccgccgcac cggtcggcgt gggcgcgcgc acgtcggcga caaaatcggc
     3781 aagcgtgaaa tcggtttcgt gtcccacgcc actgacgacg ggaaccgtgc aggcttcgat
     3841 tgcgcgcacg accggttctt cgttaaacgc ccacaagtct tcaatgctgc cgccgccgcg
     3901 acagacaatc aacacgtcgc attcggcgcg ttgcgaggcg gttttaatcg cttgtgcgat
     3961 ttgtaactcg ctgcctgtgc cttgaacagg tgtcggataa acgataacgg ggatttcggg
     4021 tgcgcggcgt ttcaaggtag taacgacatc gcgcaaagcc gccgccgcca gactggttac
     4081 gatgccgata cattgcggtc gggcgggcaa aggtttcttg cgttccgccg caaacgcgcc
     4141 ttccgcctgc aactgcgcct tcaaccgctc gtaggcttcg taaagctgcc ccaagccctt
     4201 gagccgcact tcgttcacgg taatctgaaa ttcgccccgc gtttcataaa tactgatttt
     4261 gcccgccact tcgatatggt cgccttcttt caaaggtttc gccaaacgcg ccgccgcacc
     4321 cttgaacatc gcgcaacgca cctgcgcgcg gctgtctttg agcgagaaat aataatgccc
     4381 gctggcggca cgggtcaggt tggacacttc gcccgcaatc cacagaccgg caaggtggtt
     4441 ttccaaaata cttttggcaa atgcgttcaa ctcggaaacg gacaacacgt cagaatggaa
     4501 aaaatcagac atcgaatcaa tcaaatagta aaaaatatga atatgttttg aagcccaagg
     4561 cggcatagag ccgcctaaat tgtcaacaat attataacac gcgccatctt gccgcccgcc
     4621 ttttcccata tgactttttt aagcggggaa tgggaaaaat attcatcaac ctgcctgcaa
     4681 tctattcaaa ttgaaccgcc gacaagctat gatgcggata ttttcgacag gaggaaaaat
     4741 ggatacgcag gcagttatca cacatatcgc ccgatggttg gacgaatacg ccgcacgggc
     4801 aaatgcaaaa gggtttgtcg tgggcgtttc cggcggcatc gattccgccg tcgtctccgc
     4861 actcgccgcc cgcaccggcc gccccacgct gcttctggat atgccgatac gccaacaccc
     4921 cgaccagctt gagcgggcaa ggctgcacat ccgcaatctg caacggcaat atgccaatgt
     4981 aagcgcgcaa acggtcgacc tgaccgacac cttccagacc tttgaacaaa ccgtcggcat
     5041 tcatcagacg gcatttgaca atcagccgct ttccctcgcc aacgccagaa gccgcctgcg
     5101 tatgctgacc ctgtactact acgggcagat acacggactg ctggttacgg ggacaggtaa
     5161 taagattgaa gatttcggcg tgggcttttt tactaaatac ggcgacggcg gcgtagacat
     5221 cagcccgatt gccgacctga ccaaaacgca ggtttaccgg cttgccgaag cattgggcgt
     5281 ggacgaggcg attcaaaaag ccccgccgac cgacggcctg tgggatacgg aacgcaccga
     5341 cgaagaacag atgggcgcaa gctatcccga actggagtgg gcaatgggcg tgtacggcac
     5401 gcgcaaaccc gaagattttg aagggcggca gcgcgaagtt ctggaaatct atacgcggct
     5461 tcaccgcgcc atgcagcaca aaatcaaccc gattcccgtg tgccgcatcc cgcccgaatt
     5521 gttgggctga acgtgaaaat gccgtctgaa gcggaaaacc gtgtttcaga cggcatggaa
     5581 atatccggac gcgctcctta agaatcgagt acgcgggcaa acagaatatc gttttccaaa
     5641 tgaatgtggt cgttcaaatc ctccaccatt tctttcgcca gcgcgtaaag ccgcgtccag
     5701 cttccgcaag ccccttctgg cggttggaaa ttgtcggtca gctctttgag ccgtgcgatg
     5761 gcgcggtcgt gttcttcgtg ttcgtgcatc atcacgctga tgggcattgc cgcaccgcgt
     5821 ccgacaccct gattaatcat cggaaacagc atcctttcct ctttcatcat atgcatcagc
     5881 agttcgttct gcatataggc aagcagcccg gcaatttccg ccggaaaggt atcggcatgg
     5941 acttgggcca ctttctgagc cagcggcacc aattcttcaa attgtgcgcg gtggacattg
     6001 tggtagcgtt gcaggatatg atcgacggtt gcaccaaagg gggcggtctc ccaaacggaa
     6061 aaatcagtca tcgcagtgtt ccttttacag ggtttcgggt ttggttttga acattcatac
     6121 tttaagaatc aattcaaacg gagcatacac cgcccgcgcg cttctgtaca gcctcaaacg
     6181 tattccttac attttgataa taaaagtaat tttcagaaat aaaatactgt ccgaaccgtt
     6241 ttttagaatt tgcaaaggcg attggggcgg tacagaaaaa ctattatccc gcccgcccac
     6301 ttgaaatttt tatgcccaag ccctatcctg cacgctatcg tgccaatccc aaccgaaaag
     6361 gaaaaataat gagcagcgaa ttgattgtac acaccagcga tgccgctttt gaaaaagacg
     6421 ttttaaatgc agatatcccc gtcctgctgg acttttgggc tccgtggtgc ggcccctgca
     6481 aaatgattgc cccgattttg gacgacattg ccgccgaatt tgaaggccgt ctgaaagtgg
     6541 tcaaaatcaa catcgacgac aacgaagcca ccccgtcccg tttcggcgtg cgcggcattc
     6601 cgaccctgat ggtgttcaaa aacggcgaag tcgtcgccac caaagtcggc gcattggcaa
     6661 aaggtcagct gaccgccttt gtcgaagcct ctatcgcctg ataaagcgca atcgaaaaag
     6721 ccgccggaag attccggcgg ctttttcgca cccttaagat ttgtggcgga tttcccagca
     6781 cctatggatt tttttgttgc ggaaatcttc gggaacggat tgtttggaaa tgtctttgac
     6841 ggcgtattgt tccgatacca agtcgtctaa gacgaagctg cgcaggttgt tggaaaagta
     6901 caaaatgccg tctgaagcga gcagcttcac cgcgccgtca atcagctttt tgtggtcgcg
     6961 ctggatgtcg aggatgtcgg acattttctt gctgttggaa aaactgggcg ggtccatcac
     7021 aatgaggtcg aaccgcctgc cttccccata tgccgtctga agatattgga acacgtcggc
     7081 gcggacgatt ttatgccgtt ccgtatcgat gccgttcaat tcaaaattgc gtctcgccca
     7141 atcgagataa gtgttagaca aatcgacagt ttcgctggat gccgcgccgc cggtggcggc
     7201 atagacagtg aagctgccgg tgtaggaaaa caggtttaaa aaacgtttgc ccgccgccgt
     7261 ttcgccgact tttttgcgcg tgtttcgatg atccaaaaaa agccccgtat ccaaatactt
     7321 atcaaggttg acccaaaact tgcggccgtt ttcggtgatg acgaaatcgt cgcccgcctt
     7381 gccggttttt tcgtattgct gcaaaccttt ttggcgttcg cggcgtttga ggcggatttg
     7441 ttcgggttca aaaccggtaa cgaaagcgac ggcttccaag acttcggcaa gccacgcttc
     7501 gtattcttcg ggccgcatca gccagccggt atcgtattcc tgaaggtgga ttcgatcgcc
     7561 gtaaacatcg gcggcaaagg ggaattgggg gatgtcgcgg tcgtaaatgc gccaggcttc
     7621 aatgccgttg cgtttcgccc atttcataag gtgtttgatg tttttgccca agcggttggc
     7681 aaacggtgtg atgtcggtca ttggtttcag gcggaataaa gtggaaaacg gcaattttac
     7741 tgtaattaac gcccgattgc ttgaccgttt cgggcaaacc ctataccatc cgccgcttat
     7801 cttgtcatac gaagccatcg ccttccaacc taaaccgccc ttacgggcgc gtttcttttg
     7861 ttgctttgat tttgcaaagc ctttctgtgc aggttgtcgt cgatgtaaac cacaagcaag
     7921 ccgcttgcga caaccctgta acttcacatt ccccgtatcg ttacccttcc ctgcttcagg
     7981 ccgtctgaac ctttcggacg cgggcgttgt tgtcttccaa ggatagccat gtctattaaa
     8041 tttgccgatt tgaaccttga taaaaacatt ttgtccgccg tcagcagcga gggttacgaa
     8101 agcccgacgc cgattcaggc gcaggcgatt ccgtttgctt tggaaggccg cgacatcatg
     8161 gcttcggcgc aaaccggctc cggcaaaacc gccgcctttc tgttaccgac tttgcagcga
     8221 ctgaccaaac gcagcgaaaa accgggcaaa ggcccgcgtg ctttggtgtt gaccccgacc
     8281 cgcgaattgg cggcacaagt ggaaaaaaac gcgctggcgt atgccaaaaa tatgcgctgg
     8341 ttccgtaccg tcagcatcgt cggcggcgca tcgttcggct accaaacccg cgccctgagc
     8401 aaaccggtcg atctgattgt cgccacgccg ggccgcctga tggacctgat gcaaagcggc
     8461 aaagttgatt ttgaacgttt ggaagtgctg attttggacg aagccgaccg tatgttggat
     8521 atgggcttta tcgacgacat cgaaaccatc gtcgaagcca ccccgaccga ccgtcagact
     8581 ttattgttct ccgccacttg ggacggcgcg gtcggcaaac tggcacgcaa actgaccaaa
     8641 gaccctgaaa tcatcgaagt cgaacgcgtg gacgaccaag gcaaaatcga agaacaactg
     8701 ctgtactgcg acgatatgcg tcacaaaaac cgcctgctcg accacatcct gcgcgatgcc
     8761 aatatcgatc aatgcgtgat tttcacgtcc accaaagcga tgaccgaagt catcgcggat
     8821 gaattgtacg aaaaaggttt cgccgccaac tgcctgcacg gcgacatgcc gcagggctgg
     8881 cgcaaccgca cgctgatgga tttacgcaaa ggccgctgca aaattttggt tgccaccgac
     8941 gttgccgcac gcggtatcga cgtaccgacc attacccacg tcatcaacta cgacctgccg
     9001 aaacaggcgg aagactacgt ccaccgcatc gggcgcaccg gccgcgcagg ccgcacgggt
     9061 attgcgatta cgtttgccga agtgaacgaa tacgtcaaag tccacaaaat cgaaaaatac
     9121 attaaccgca aactgcccga actgaccatc gaaggcatgg aaccgacccg caaacgcaaa
     9181 tccgcaggcg gtaagccaaa aggcaaaggc ggctggggcg ataggaaatc cggcggccgg
     9241 cgcggcgatc ataaaccggg caaagaaggc ttcggcggca aaacgcgcgg cgaaggtttc
     9301 aagaaagaag gctttaagaa agacggtttc aaaaaaaccg gcgaaggctt caaaggcaaa
     9361 cgtaaagccg gcgattcttt tgcaggcaga ggcgaacgcc gttacaaaga ccgctaagcc
     9421 ccaacctgcc tcataaacca atgccgtctg aaaccgattt cgagtttcag acggcatttt
     9481 tgcaatgttt caacaccgcc cggctttgat acccaaagga ttaatctgca atatagtgga
     9541 ttaacaaaaa ccagtac
//
LOCUS       DAWGKF010000071         9435 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.071, whole genome shotgun sequence.
ACCESSION   DAWGKF010000071 DAWGKF010000000
VERSION     DAWGKF010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9435)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9435)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9435
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.071"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(135..1577)
                     /gene="aldA"
                     /locus_tag="WHR07_001189"
     CDS             complement(135..1577)
                     /gene="aldA"
                     /locus_tag="WHR07_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HEZ2130405.1"
                     /translation="MKQLAMYINGRFENDFNGEWRDVLNPSTEETIAREPKGGKADVD
                     RAVAAARAAQPAWERLPAVERGAYLRKIAQGIRERADELTDTIVAEGGKTKDLARVEV
                     MFTADYLDYQAEWARRYEGEIIQSDRPRENILLFKRPLGVVAGILPWNFPFFLIARKM
                     GPALVTGNTIVVKPSSVTPINCHIFAEIVDAVGLPAGVFNVVNGPGAEIGNALSAHPQ
                     VDMVSLTGSVEAGRQVMEAASANITKVSLELGGKAPAIVLKDADLDLAVKSILASRVG
                     NTGQICNCAERVYVHSSLKDAFIEKMTAAMKGVRYGNPAEAEAGALEMGPLIEERAVK
                     AVAEKVERAVKQGAKLVCGGKRAEGRGYFFEPTLLTDTDNSMDIMKEETFGPVLPVST
                     FDTLDQVIALANDCEFGLTSSVYTTNLNEAFYVTRRLQFGETYINRENFEAMQGFHAG
                     WKKSGIGGADGKHGLEEYLQTQVVYLETDI"
     gene            complement(1612..1812)
                     /locus_tag="WHR07_001190"
     CDS             complement(1612..1812)
                     /locus_tag="WHR07_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130406.1"
                     /translation="MDTVGSLAIGYATGGNAGAFTDANADWNNRQLHSSEYKLAEQYA
                     DIVASRLNISKETCTAIYLGIN"
     gene            complement(1821..2210)
                     /locus_tag="WHR07_001191"
     CDS             complement(1821..2210)
                     /locus_tag="WHR07_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130407.1"
                     /translation="MLYKCKIKKLDNTIEEAVLIEINGYELHCFISYCPFKIFENQFY
                     EVELSYEIFNDYILDKSTSNIGFRKIDDSFKYEITAELKNNHLTLQNIQFEEDEYLIN
                     YSYLDNCLVTLTADRISVSFIREIQAA"
     gene            complement(2418..3335)
                     /locus_tag="WHR07_001192"
     CDS             complement(2418..3335)
                     /locus_tag="WHR07_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ2130408.1"
                     /translation="MEKAEHLNSSRFVNLVKSGGGSYVEGSYRFDTLSNGISIHGGTV
                     TARCDFCSSRLAEPYVSFVLLLEGSLDFGINRCRFQIDADGGKIVLIAVGEEVLFSRY
                     LYRGGKTVKMTIKGMEQWLLRPEYARFAPLLYREPVRIWDLPPNLRGLAASCLKAVPK
                     GHLGETLRREADVLRLLSDLWDTVSDGIGPAAGQTAEADAMPSEDFSRTLNAAFAGGA
                     HQVNRLTDALNISERTLQRRMRDHFGITTSEWLHHKQMQHALYLLQNGGKSIGETAYL
                     CGYRHVSSFTQAFRQYFGSTPAETKKENR"
     gene            3508..4308
                     /locus_tag="WHR07_001193"
     CDS             3508..4308
                     /locus_tag="WHR07_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ2130409.1"
                     /translation="MSPSPFIEMKDVAFAYGDRPILKNINFSIPQGNFAAVMGGSGSG
                     KTTLMRLITGQIRPQSGQVLIEGRDLAGFSADELYEHRRRMGVLFQHGALFTDLSVFD
                     NIAFPMRELTRLPEAVIRDLVLLKLNAVGLRGVENLMPSELSGGMSRRVALARTIALD
                     PEIMLYDEPFTGLDPISLGVIAHLISRVNKALRSTSIMVTHDIEKSLEIVDQVIFLAH
                     GEIMFSGSPQEMRELDSPWVRQFVGGLADGPVAYRYPAQTSLQQDLLG"
     gene            4356..5132
                     /gene="mlaE"
                     /locus_tag="WHR07_001194"
     CDS             4356..5132
                     /gene="mlaE"
                     /locus_tag="WHR07_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HEZ2130410.1"
                     /translation="MNFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVR
                     QVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLA
                     AILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIF
                     NVAGIFGAYLVGVSWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQ
                     GFHCVPTSEGILRASTRTVVSSALTILAVDFILTAWMFTD"
     gene            5183..5677
                     /gene="mlaD"
                     /locus_tag="WHR07_001195"
     CDS             5183..5677
                     /gene="mlaD"
                     /locus_tag="WHR07_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HEZ2130411.1"
                     /translation="MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGGSDKTYAVY
                     ADFGDIGGLKVNAPVKSAGVLVGRVGAIGLDPKSYQARVRLDLDGKYQFSSDVSAQIL
                     TSGLLGEQYIGLQQGGDTENLAAGDTISVTSSAMVLENLIGKFMTSFAEKNADGGNAE
                     KAAE"
     gene            5714..6304
                     /locus_tag="WHR07_001196"
     CDS             5714..6304
                     /locus_tag="WHR07_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HEZ2130412.1"
                     /translation="MKKSSLISALGIGILSIGMAFAAPADAVSQIRQNATQVLSILKN
                     GDANTARQKAEAYAIPYFDFQRMTALAVGNPWRTASDAQKQALAKEFQTLLIRTYSGT
                     MLKLKNANVNVKDNPIVNKGGKEIIVRAEVGVPGQKPVNMDFTTYQSGGKYRTYNVAI
                     EGASLVTVYRNQFGEIIKAKGVDGLIAELKAKNGSK"
     gene            6361..6639
                     /locus_tag="WHR07_001197"
     CDS             6361..6639
                     /locus_tag="WHR07_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance protein MlaB"
                     /protein_id="HEZ2130413.1"
                     /translation="MHTELNNGTLHISGDITVKTLTGEAFERFQQQCRLKETIAVDFG
                     GVKRADSACVSLLLEVLRGCKGSVRLTGIPESVRALSELYEIKDWLKS"
     gene            6636..7463
                     /locus_tag="WHR07_001198"
     CDS             6636..7463
                     /locus_tag="WHR07_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HEZ2130414.1"
                     /translation="MKKTAYAFLLLIGFASAPAFAETRPADPYEGYNRAVFKFNDQAD
                     RYIFAPAARGYRKVAPKPVRAGVSNFFNNLCDVVSFGSNILRLDIKRASEDLVRVGIN
                     TTFGLGGLIDIAGAGGIPDNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGIT
                     SVYSPKNIVFRTPVGRWGTTAVSAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRA
                     RQTGATPAEGTEDNIDIDELVESAETGAAETAVQEDSVSETQAEAAGEAETQPGTQP"
     gene            7588..7950
                     /locus_tag="WHR07_001199"
     CDS             7588..7950
                     /locus_tag="WHR07_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ"
                     /protein_id="HEZ2130415.1"
                     /translation="MYEVNRSVFVLIPLEPFWNWLQTLPGNHLDGLTLEDIQADANSY
                     LVRPCETADEVWDEIEARFEDIFAAELADWCEDEREWPALDADIFNEWFDIQLSTVIT
                     DLEHEPLAREAFQPINLN"
     gene            7947..8333
                     /locus_tag="WHR07_001200"
     CDS             7947..8333
                     /locus_tag="WHR07_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEZ2130416.1"
                     /translation="MMKLTVRNYHLDGYGHVNNARYLEFFEEARWAFFEERGLLHELA
                     GLILIVARIDIRYSRPAVEGDVLQFSCRLKTPGTRRIVLTQTITLPNGKTAAEADITL
                     MPVHAATQRTVSLPATLARALEALSE"
     gene            8330..8818
                     /locus_tag="WHR07_001201"
     CDS             8330..8818
                     /locus_tag="WHR07_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEZ2130417.1"
                     /translation="MKKILTAAVVALIGILLAIVLIPDSKTAPAFSLPDLHGKTVSNA
                     DLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVK
                     DYGLPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAL
                     AQ"
     gene            complement(8902..9069)
                     /locus_tag="WHR07_001202"
     CDS             complement(8902..9069)
                     /locus_tag="WHR07_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HEZ2130418.1"
                     /translation="MEDDVWPGRRVIVMAGVTVGRGSVVGAGAVVTKDIPPYSLAAGN
                     PAVVKKNLPEG"
     gene            complement(9036..9416)
                     /locus_tag="WHR07_001203"
     CDS             complement(9036..9416)
                     /locus_tag="WHR07_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-o"
                     /protein_id="HEZ2130419.1"
                     /translation="MGSKFFFLLLRFAGSVLPPSHMRGIGIVGRRVRGFLARRISPHI
                     GRGVNIERGAYVFPDTVLGDGSGIGANCEICRGPVVGKNVMMEPECLFYSNNHKFDRS
                     KNALRATRKSVRLRWRTMSGRGAG"
BASE COUNT         2177 a         2628 c         2385 g         2245 t
ORIGIN      
        1 ttaaatttaa tccgctatac aaagacaaaa acatcgacct cggtcatgac tgattgccgg
       61 tgaagcaata aaaatgccgt ctgaacctga aaacgggttc agacggcatt ttctatcggg
      121 gttttaaagc ggcattaaat gtcggtttcc aaataaacga cttgggtttg cagatattct
      181 tccaaaccgt gtttgccgtc cgcaccgccg atgccggatt ttttccaacc ggcgtggaaa
      241 ccctgcatcg cttcaaagtt ttcgcggttg atgtaggttt cgccgaattg caggcggcgg
      301 gtaacgtaga aggcttcgtt taaattagtc gtataaacag aactggtcag accaaactcg
      361 caatcgttag ccagtgcgat gacttggtcg agcgtgtcga aagtggaaac aggcaggacg
      421 gggccgaagg tttcttcttt cataatgtcc atactgttgt cggtgtcggt cagcagggtc
      481 ggctcgaaga aatagccgcg tccttcggcg cgtttgccgc cgcaaaccaa tttcgcacct
      541 tgtttgactg cccgttccac tttttcggca acggctttga cggcgcgctc ttcaatcagc
      601 ggacccattt ccagcgcgcc ggcttcggct tcggcagggt tgccgtagcg cacgcctttc
      661 atcgcggcgg tcattttttc aatgaatgcg tctttcaggc tgctgtggac atagacgcgc
      721 tcggcgcagt tgcagatttg accggtgttg ccgacgcgcg aagccaagat ggatttcact
      781 gccaaatcca aatccgcgtc tttcaaaacg atggcagggg ctttgccgcc gagttccaac
      841 gaaactttgg tgatgttggc ggaggcggct tccatcactt ggcggcctgc ttcgacggag
      901 ccggtcaggc tgaccatatc gacttgcgga tgggcggaca aggcattgcc gatttccgca
      961 ccagggccgt tcactacgtt gaacacgcct gcgggcagtc cgaccgcatc gacgatttcg
     1021 gcgaagatgt ggcagttgat cggggttacg ctgctgggtt tgacgacgat ggtattgccc
     1081 gttaccaaag ccgggcccat tttgcgggca atcaggaaga aggggaagtt ccacggcaaa
     1141 atgcctgcca cgacgcccag cggacgtttg aacaataaaa tgttttcgcg cgggcggtcg
     1201 ctttggatga tttcgccttc gtaacggcgc gcccattcgg cttggtaatc gagataatcg
     1261 gcagtgaaca tgacttccac gcgcgccaag tctttggttt tgccgccttc ggcaacgatg
     1321 gtgtcggtca gctcgtcggc gcgttcgcgt atgccttggg cgattttgcg caaatacgcg
     1381 ccgcgttcga ccgcaggcag acgctcccaa gccggttgcg ccgcacgcgc cgccgcgacg
     1441 gcgcggtcaa cgtccgcctt gccgcctttg ggttcgcggg cgatggtttc ttcggtggat
     1501 gggttcaata cgtcgcgcca ttcgccgttg aaatcgtttt caaagcgtcc gttgatgtac
     1561 atggccaatt gtttcatttc gggttctcca gttttgtagt cagatgtagt cttagtttat
     1621 tcccaaataa attgccgtac aagtttcttt tgaaatgttt agacgagaag ctactatgtc
     1681 tgcatattgt tctgctaatt tatattcact cgaatgcaac tgccgattat tccaatctgc
     1741 attcgcatca gtaaaagccc cagcattgcc gcctgtggca taaccaatcg ctaaactgcc
     1801 aacggtatcc acaacaggtt tcaggctgcc tgaatttctc taataaatga aacacttatt
     1861 ctatcagccg ttaatgtaac caaacaatta tcaagataag agtagtttat taaatactca
     1921 tcttcttcaa attgtatatt ttgtagggtt agatgattat tttttaattc tgccgttatt
     1981 tcatacttga aactatcatc tatttttcta aatccaatat ttgaagttga tttatccagt
     2041 atgtaatcat taaagatttc ataggataat tccacttcat aaaattgatt ttcaaatatt
     2101 ttgaatgggc agtacgatat aaaacaatgt agttcataac catttatttc aatcaatact
     2161 gcctcttcaa tggtgttatc taactttttg attttacatt tatataacat ttatcttgcc
     2221 tttggataaa ttgttttgtt ttttggattg ttattcaaag ttctccaaaa gtcttttcct
     2281 gattttgtat gtatcgtggt aatactacca ttttcattgg ttccaacaaa aataaattta
     2341 gattgacctt tggaatcagt acccaaaaac tgaacatatc cagacacgcg gatttcgggt
     2401 tttaaatcaa atgcggctta ccggttttct tttttggttt ccgcaggcgt gctgccgaaa
     2461 tattgcctga atgcctgagt aaagctggaa acgtggcggt agccgcataa atatgcggtt
     2521 tcgcctatgc ttttgccccc gttttgcaac agataaagcg cgtgctgcat ttgtttgtgg
     2581 tgcagccact cgcttgtggt aatgccgaaa tggtcgcgca tacggcgttg cagcgtcctt
     2641 tcgctgatgt tcagcgcgtc tgtcagccgg ttgacttggt gtgcgccgcc ggcaaacgcg
     2701 gcattcaggg tgcggctgaa gtcttcagac ggcatagcgt ctgcttccgc cgtttgcccc
     2761 gccgccggcc cgatgccgtc tgaaaccgtg tcccacaagt ccgacagcag ccgcaacacg
     2821 tccgcctcgc ggcgcaatgt ttcgcccaaa tgcccctttg ggacggcttt caggcaggat
     2881 gccgccaagc cgcgcaggtt cgggggcaaa tcccatatcc tgaccggttc gcggtaaagc
     2941 aggggtgcga aacgcgcgta ttccggacgc agcagccatt gttccatacc tttaatggtc
     3001 attttgaccg ttttgccgcc tcggtaaaga tagcggctga acaggacttc ttccccgaca
     3061 gcaattagga caatcttgcc gccgtccgca tcgatttgga agcggcagcg gttgatgccg
     3121 aagtccaaac tgccttccag caagagcacg aacgacacat aaggttcggc gaggcggctg
     3181 ctgcaaaaat cacaccgtgc cgttactgtg ccgccgtgga tggaaatgcc gttggacaaa
     3241 gtatcgaaac ggtagctgcc ctccacatag ctgccgccgc cgcttttgac tagattgacg
     3301 aaccggctgc tgttcaaatg ttctgctttt tccatagttt tctgataaag gttatcattt
     3361 gaaagataac atttttcgcc acagcaaaca atccgccgcc gacaacggca ttttcacaac
     3421 atttaccgtc cgtatgccgt ctgaaaattg cccgtcttcc cgataagcct taaaatacac
     3481 gccgtcaaac ctaccgtccg tccgtacatg agcccatccc cctttatcga aatgaaagac
     3541 gtcgccttcg cgtatggcga ccgcccgatt ctgaagaaca tcaatttcag cattccgcaa
     3601 ggcaattttg ctgccgtaat gggcggttcg ggcagcggca aaaccacgct gatgcgactg
     3661 attacaggac agattcgtcc gcagtccggg caggttttga ttgaaggacg ggatttggcg
     3721 ggcttttcgg ctgacgagtt gtatgaacac cgccgccgta tgggcgtatt gttccaacac
     3781 ggcgcgctgt ttactgattt gtcggtattc gacaatatcg cttttccgat gcgcgaactg
     3841 acgcgcctgc cggaagcggt gattcgggat ttggttttgt tgaaattgaa cgcggtcggt
     3901 ctgcgcggtg tggaaaacct gatgccgtcc gagttgtccg gcgggatgtc gcgccgcgtc
     3961 gcgcttgccc gcacgattgc gctcgaccct gaaattatgt tgtacgacga gccgtttacc
     4021 ggcctcgatc cgatttcctt gggcgtgatt gcccacttga tcagccgcgt caacaaggct
     4081 ttgcgttcga ccagtattat ggtaacgcac gacattgaaa aatctttgga aatcgtcgat
     4141 caggtgattt tcttggcgca cggcgaaatt atgttctccg gctcgccgca ggaaatgcgc
     4201 gaactggatt cgccttgggt gcgccagttt gtcggcgggc tggcagacgg ccccgtagca
     4261 taccgttatc cggcgcaaac gtcgttgcag caggacctgt tgggataaat gagttgatgc
     4321 cgtctgaaac cgttgaactt tacacataga aatttatgaa ctttatccgt tccgtcgggg
     4381 cgaaaaccct cggccttatt caatccctcg gcagtatcac gctgtttctg ctgaacattc
     4441 tggcgaagtc cggtacggct ttcgtccgtc cgcgcctgag cgtgcgccaa gtgtatttcg
     4501 ccggtgtgct gtcggtgttg attgttgccg tttcggggct gtttgtcggc atggtcttgg
     4561 gtttacaggg ctatacgcag ttgtcgaaat tcaaatccgc cgatattttg ggctatatgg
     4621 tcgcggcttc gctattgcgc gagctgggtc cggtattggc agcgattttg tttgccagca
     4681 gcgcgggcgg tgcgatgacc agcgaaatcg gtctgatgaa aacgaccgaa cagctcgaag
     4741 cgatgaatgt gatggcggta aaccctgtcg cccgcgtggt tgcgccgcgc ttttgggcgg
     4801 gcgtgttttc catgccgctt ttggcttcga ttttcaacgt ggcgggcatt ttcggtgcgt
     4861 atttggtcgg tgtaagctgg ctgggcttgg acagcggcat tttctggtcg caaatgcaga
     4921 acaacatcac gatacattac gatgtaatca acggtctgat caaatccgcc gcgttcggcg
     4981 tggcggtaac gctgattgcc gtgcatcagg gcttccactg tgtcccgact tcggaaggca
     5041 ttttgcgcgc cagcacgcgt acggtggttt cgtccgccct gacgattttg gcggtcgatt
     5101 ttatattgac cgcgtggatg tttacagatt gacagggcgt ctgaagacga aacgcggaac
     5161 atcggatatt caaggaactt taatgaaaaa gaacatattg gaattttggg tcggactgtt
     5221 cgtcctgatt ggcgcggcgg cggttgcctt tctcgctttc cgcgtggcgg gcggtgcggc
     5281 gttcggcggt tcggacaaaa cttacgccgt ttatgccgat ttcggcgaca tcggcggttt
     5341 gaaggtcaat gcccccgtca aatccgcagg cgtattggtc gggcgcgtcg gcgctatcgg
     5401 acttgacccg aaatcctatc aggcgagggt gcgcctcgat ttggacggca agtatcagtt
     5461 cagcagcgac gtttccgcgc aaatcctgac ttcgggactt ttgggcgagc agtacatcgg
     5521 gctgcagcag ggcggcgaca cggaaaacct tgctgccggc gacaccatct ccgtaaccag
     5581 ttctgcaatg gttctggaaa accttatcgg caaattcatg acgagttttg ccgagaaaaa
     5641 tgccgacggc ggcaatgcgg aaaaagccgc cgaataaacg tatgccatca tattcaaact
     5701 aggacactta atcatgaaaa aatcctccct catcagcgca ttgggcatcg gtattttgag
     5761 catcggcatg gcatttgccg cccctgccga cgcggtaagc caaatccgtc aaaacgccac
     5821 tcaagtattg agcatcttaa aaaacggcga tgccaacacc gcccgccaaa aagccgaagc
     5881 ctatgcgatt ccctatttcg atttccaacg tatgaccgca ttggcggtcg gcaacccttg
     5941 gcgcaccgcg tccgacgcgc aaaaacaagc gttggccaaa gaatttcaaa ccctgctgat
     6001 ccgcacctat tccggcacga tgctgaaatt aaaaaacgcc aacgtcaacg tcaaagacaa
     6061 tcccatcgtc aataaaggcg gcaaagaaat catcgtccgc gccgaagtcg gcgtacccgg
     6121 gcaaaaaccc gtcaacatgg acttcaccac ctaccaaagc ggcggtaaat accgtaccta
     6181 caacgtcgcc atcgaaggcg cgagcctggt taccgtgtac cgcaaccaat tcggcgaaat
     6241 tatcaaagcg aaaggcgtgg acggactgat tgccgagttg aaggctaaaa acggcagcaa
     6301 gtaatccata agccatgccg ccagactgaa gatggcatgg attttttcct accgaacact
     6361 atgcatacag aactcaacaa cggaacactg cacatcagcg gcgacatcac cgtcaaaacc
     6421 ctgaccgggg aggcttttga gcgtttccag cagcaatgcc gtctgaaaga aaccattgcc
     6481 gtcgatttcg gcggtgtcaa acgtgccgat tccgcctgcg tgtcgctgct gctcgaagtg
     6541 ctgcgcggtt gcaaaggcag cgtcaggctg accggcattc ccgaatccgt gcgcgcgctg
     6601 tccgaactgt acgaaatcaa agactggctg aaatcatgaa aaaaaccgcc tatgccttcc
     6661 tcctgctgat cgggttcgct tccgcccctg catttgccga aacccgcccc gccgaccctt
     6721 atgaaggcta caaccgcgcc gttttcaaat tcaacgacca agccgaccgc tacattttcg
     6781 cccctgccgc gcgcggctac cgcaaagttg cgccgaaacc cgtccgcgcc ggcgtgtcca
     6841 atttttttaa taacctgtgc gacgtggtca gcttcggcag caatatcttg cgcttggaca
     6901 tcaaacgcgc aagcgaagac cttgtccgcg tcggcatcaa caccactttc ggtttgggcg
     6961 ggcttatcga catcgccggc gcgggcggca ttcccgacaa taaaaacacc ttgggcgaca
     7021 cgtttgcttc gtggggatgg aaaaacagca attatttcgt gttgcccgtc ttagggccgt
     7081 ccaccgtccg cgacgcgctc ggcacgggta ttacctccgt ttattcgccc aagaatatcg
     7141 tcttccgcac ccctgtcgga cgctggggca cgactgccgt atccgccgtc agtacgcgcg
     7201 aaggcctgct cgatttgacc gacagcctgg acgaagccgc catcgacaaa tacagctaca
     7261 cgcgcgacct ctatatgaaa gtccgtgcgc ggcagaccgg tgcaacacct gccgaaggta
     7321 cggaagataa catcgacatc gacgaattgg tcgaaagtgc cgaaaccggc gcggcggaaa
     7381 ctgccgttca agaagattcc gtatccgaaa cacaggcaga agcagcaggg gaagccgaaa
     7441 cgcaacctgg aacacaacct taaagccatg ccgtctgaaa atccgtgttc ggacggcatt
     7501 cccttctgtc ggaacggaca gtccgaaacc acagattggg ctataatctc ttttttgcgc
     7561 ataccgcgcg acagcaaagg aaaaaccatg tacgaagtca accgcagcgt attcgtcctc
     7621 atccctttag aacctttttg gaactggctg caaaccctgc cgggcaacca cctcgacgga
     7681 ctgactcttg aagacatcca agccgacgcc aattcctacc ttgtccgccc gtgcgaaacc
     7741 gccgacgaag tatgggacga aatcgaagcc cgttttgaag acattttcgc cgccgaactt
     7801 gccgactggt gcgaagacga acgcgagtgg cctgcgctcg atgccgacat tttcaacgaa
     7861 tggttcgaca tccagctttc taccgtcatc accgacctcg aacacgaacc gcttgcccgc
     7921 gaagccttcc aacccatcaa cctgaactga tgaagctgac cgtccgcaac taccatctcg
     7981 acggctacgg ccatgtcaac aatgcgcgct acctcgaatt tttcgaagaa gcgcgctggg
     8041 cgttttttga agaacgcgga ctgctgcacg agttggcagg cctcatactg attgtcgccc
     8101 gcatcgacat ccgatacagc cgccccgccg tcgaaggcga cgtattgcag ttttcatgcc
     8161 gcctgaaaac ccccggcacg cgccgtattg tgctgaccca gacgattaca ctgccaaacg
     8221 gcaaaaccgc cgcagaagcc gacatcaccc tgatgcccgt ccacgccgcc acacaacgca
     8281 ccgtcagcct gcccgccacc cttgcccgcg cattggaagc cttgtccgaa tgaaaaaaat
     8341 actcaccgcc gccgtcgtcg cactgatcgg catcctcctt gccatcgtcc tcatccccga
     8401 cagcaaaacc gcgcccgcct tctccctgcc cgacctgcac ggaaaaaccg tttccaacgc
     8461 cgacctgcaa ggcaaagtaa ccctgattaa tttttggttt ccctcctgtc cgggttgtgt
     8521 gagcgaaatg cccaaaatca ttaaaacggc aaatgactat aaaaacaaaa acttccaagt
     8581 ccttgccgtc gcccagccca tcgatccgat agaaagcgtc cgccaatatg tcaaagacta
     8641 cggtttgccg tttaccgtca tgtatgatgc ggacaaagct gtcggacagg cgttcggcac
     8701 acaggtttat ccgacttccg tccttatcgg caaaaaaggc gaaatcctca aaacctacgt
     8761 cggcgaaccc gatttcggca aactctacca agaaatcgat accgcgctgg cacaatagcg
     8821 atgccgtctg aggcgcaaaa aaaaacagaa acgatgttcc tgttttttta gatcatccgc
     8881 cccgacacgt tcagacggca ttcaaccttc cggcagattc tttttcacca ctgccggatt
     8941 gcctgccgcc aaagagtagg gcggaatgtc ttttgtaacc accgcgcctg cgcccacgac
     9001 cgaaccgcgt ccgacggtta cgcccgccat tacaatcacc ctgcgccccg gccagacatc
     9061 gtcctccaac gtaatcggac ggatttccgt gtagccctca aagcgttttt tgaacggtca
     9121 aacttgtggt tatttgaata aaacagacat tccggctcca tcatcacatt tttgccgacc
     9181 accggcccac ggcagatttc acagtttgcc ccgatgcccg agccgtcgcc caaaaccgta
     9241 tccgggaaca catacgcccc gcgttcgata ttgaccccgc gtccgatatg cggagaaatc
     9301 cgccgtgcca gaaaaccgcg cacccgtctg ccgacgatgc cgatgccgcg catatgcgac
     9361 ggcggcaaca ccgaaccggc aaaacgcagc agcaggaaaa agaattttga tcccatcaaa
     9421 cctccctcaa aagaa
//
LOCUS       DAWGKF010000072         9405 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.072, whole genome shotgun sequence.
ACCESSION   DAWGKF010000072 DAWGKF010000000
VERSION     DAWGKF010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9405)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9405)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9405
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.072"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            122..331
                     /locus_tag="WHR07_001204"
     CDS             122..331
                     /locus_tag="WHR07_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HEZ2130420.1"
                     /translation="MPYVNIKVTGGKEAPTAAQKAELIGGVTELLARVLGKNPETTVV
                     VIDEVDTDNWGIGGKSVSERRKEGR"
     gene            420..1634
                     /locus_tag="WHR07_001205"
     CDS             420..1634
                     /locus_tag="WHR07_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEZ2130421.1"
                     /translation="MDKFPKSAKLDHVCYDIRGPVHKKALQLEEEGNKILKLNIGNPA
                     PFGFEAPDEILVDVIRNLPTSQGYCDSKGLYSARKAIVHYYQTKGLRDITVDDVYIGN
                     GVSELITMSMQALLNDGDEILIPAPDYPLWTAAATLAGGTVRHYLCDEENGWFPNLAD
                     MEAKITPKTKAIVVINPNNPTGAVYSREILLEIAELARKHGLIIFADEIYDKILYDGA
                     VHHHIAALAPDLLTVTFNGLSKSYRVAGFRQGWMVLNGPKHHAKGYIEGLDMLSSMRL
                     CANTPMQHAIQTALGGYQSINEFILPGGRLLEQRNRAWELVSQIPGVSCVKPMGAMYM
                     FPKIDTEMYRIHDDMKFVYDLLVREKVLLVQGTGFNWIKPDHFRIVTLPYVHQIEEAM
                     GRLARFLQTYRQ"
     gene            complement(1721..4300)
                     /gene="clpB"
                     /locus_tag="WHR07_001206"
     CDS             complement(1721..4300)
                     /gene="clpB"
                     /locus_tag="WHR07_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HEZ2130422.1"
                     /translation="MRYDKLTAKFQQALAEAQSLALAADGSYLEAGFVLKALLDDQNS
                     GAAALLAHSGVNVPQVKQRLQQHLNSLPKVSGQGGDILPSRELQAVLNLMDKAATKRG
                     DAYIASELFLLALVQQNDAAGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDA
                     LKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIF
                     IDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ
                     KVLVGEPSVENTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAID
                     LIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEING
                     LQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEH
                     LEKQRAAAERADTDSTKPANKLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKM
                     EEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAG
                     FLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDE
                     VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV
                     KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTV
                     SDAALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIRVEADGDRL
                     KFA"
     gene            4560..5570
                     /gene="trpS"
                     /locus_tag="WHR07_001207"
     CDS             4560..5570
                     /gene="trpS"
                     /locus_tag="WHR07_001207"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEZ2130423.1"
                     /translation="MSKKRVLTGVTTTGIPHLGNYVGAIRPAVRAAQNPDTESFLFLA
                     DYHGIIKCHEPEMIHQSTQAVAATWLACGLDPERTTFYRQSDIPEVMELNWILTCITA
                     KGLMNRAHAYKAAVQANSENNQEDPDFGVEMGLFSYPILMTADILMFNANEVPVGRDQ
                     IQHVEMARDIAGRFNHRFRELFTLPEVKIDENVELLVGLDGRKMSKSYGNTIPLWEND
                     KKTQKSVNKIITNMKEPGEPKQPDESPLFEIYKAFSTPSETVEFTKMLADGLAWGEAK
                     KLLAAKINAELAEPRERYNELTADPSQIEEILQAGAQKARKEARELLDKVRDAVGIRP
                     LK"
     gene            5576..5917
                     /locus_tag="WHR07_001208"
     CDS             5576..5917
                     /locus_tag="WHR07_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130424.1"
                     /translation="MPSEPLKGLPEQNVVRLTGKHPNDLEAVSGKCMETDDKGGPVGW
                     AENGVCHTLFAKLVGNIAEDGGKLTDYLISHSALQPYQAGKSGYAAVQNGRYVLEIDS
                     EGAFYFRRRHY"
     gene            6237..6602
                     /locus_tag="WHR07_001209"
     CDS             6237..6602
                     /locus_tag="WHR07_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130425.1"
                     /translation="MKKLLIAAMMAAALAACSQEAKQEVKEAVQAVESDVKDTAASAA
                     ESAASAVEEAKDQVKDAAADAKASAEEAVTEAKEAVTEAKEAVTEAKEAVTEAAKDTL
                     NKAADATQEAADKMKDAAK"
     gene            complement(6811..8319)
                     /gene="ppx"
                     /locus_tag="WHR07_001210"
     CDS             complement(6811..8319)
                     /gene="ppx"
                     /locus_tag="WHR07_001210"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HEZ2130426.1"
                     /translation="MTTTPANILASVDLGSNSFRLQICENNNGQLKVIDSFKQMVRFA
                     AGLDEQKNLSAASQEQALDCLAKFGERLRGFRPEQVRAVATNTFRVAKNIADFLPKAE
                     AALGFPIEIIAGREEARLIYTGVIHTLPPGGGKMLVIDIGGGSTEFVIGSTLNPDITE
                     SLPLGCVTYSLRFFQNKITAKDFQSAISAARNEIQRISKNMRREGWDFAVGTSGSAKS
                     IRDVLAAEMPQEADITYKGMRALAERIIEAGSVKKAKFENLKPERIEVFAGGLAVMMA
                     AFEEMKLDRMTVTEAALRDGVFYDLIGRGLNEDMRGQTVAEFQHRYHVSLNQAKRTAE
                     TAQTFMDSLCHAKNVTVQELALWQQYLGRAAALHEIGLDIAHTGYHKHSAYILENADM
                     PGFSRKEQTILAQLVIGHRGDMKKMSGIIGTNEMLWYAVLSLRLAALFCRSRQDLSFP
                     KNMQLRTDTESCGFILRIDREWLERHPLIADALEYESVQWQKINMPFKVEVV"
     gene            complement(8436..9167)
                     /locus_tag="WHR07_001211"
     CDS             complement(8436..9167)
                     /locus_tag="WHR07_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ2130427.1"
                     /translation="MSREINAGGHHFLYGGISGGGVHYWDNKDFSEQCLHLSLGYKNR
                     SVTRSFGIVPFVGQNLLGGSRYNFVGGFNADFSQHLSERWRLTLNAGNMWKHYQEDRT
                     AARYDSHMPLAGATLMYSAPKDWLLYGGADWSHDLTKEAEQASVRKGLRIGAVKTFDG
                     GLGLRANLRYTRRTFDAPGTIVYRFPRKDHEYQANLSFWHDKISWKGFTPQLNFRYLK
                     IDSNMKSFYTRKNTQIFMSVEKDFK"
BASE COUNT         2187 a         2433 c         2467 g         2318 t
ORIGIN      
        1 gccttgtcct gatttttgtt aatccgctat atcgatttga atttttcaga aaatgaagcg
       61 gacgtttggg cggaggcaac ttgtttgata agatagcaat atttcaaaac ggagaaagat
      121 catgccttat gtcaatatta aagtaaccgg cggcaaggaa gcaccgactg ccgcgcaaaa
      181 agcggaactg atcggcggcg taaccgaatt gctggcacgc gtgctgggca aaaatcccga
      241 aacaacggtt gtcgtgattg atgaagtgga taccgataac tggggaatag gcggcaaaag
      301 cgtcagcgaa cggcgcaaag agggcaggta aaaagcctga aaatctcggt ttgatgcttt
      361 aaattccgcg tgaaaaagag tacattccca cccattgccc aaaatttacg gaacacatca
      421 tggataaatt tcccaagtct gcaaagctcg atcacgtctg ttacgacata cgcgggccgg
      481 ttcacaaaaa agcccttcag ttggaagagg agggcaataa aatccttaaa ctcaatatcg
      541 gcaaccctgc gccgttcggc tttgaagccc ctgatgaaat cttggtcgat gtcatccgca
      601 acctgccgac ttcgcaaggc tattgcgatt ctaaagggct gtattccgcc cgcaaagcca
      661 ttgttcacta ctatcagacc aaaggtttgc gcgatattac ggttgatgat gtctatatcg
      721 gcaacggcgt gtccgagctg attacgatgt ctatgcaggc attgctcaac gacggcgacg
      781 aaatcctgat tcccgcgccc gactaccctt tgtggacggc ggcggcaacg cttgcgggcg
      841 gtacggtacg ccattatctg tgcgacgaag aaaacggctg gttccccaac cttgccgata
      901 tggaagccaa aatcacgccc aaaaccaaag ccatcgtcgt catcaatccc aataatccga
      961 caggcgcggt gtacagcagg gaaatcctgt tggaaatcgc cgaactggcg cgcaagcacg
     1021 gtttgattat tttcgccgac gagatttacg ataaaatcct ttatgacggc gcggttcacc
     1081 accacatcgc cgcgcttgcc cccgaccttt tgacggtaac gttcaacggt ttgtccaaat
     1141 cctaccgcgt cgccggcttc cgccaaggct ggatggtgct caacgggccg aaacatcacg
     1201 caaaaggtta catcgagggt ttggatatgc tctcgtctat gcgcctgtgt gccaatacgc
     1261 cgatgcagca cgcgattcag acggcattgg gcggctatca gagcatcaac gaatttattt
     1321 tgcccggcgg gcggcttttg gaacagcgca acagggcgtg ggaactggtc agccaaatcc
     1381 ccggcgtgtc ctgcgtcaaa ccgatgggcg cgatgtatat gttcccaaaa atcgataccg
     1441 aaatgtaccg tatccacgat gacatgaaat tcgtttacga tttgctggtg cgcgaaaaag
     1501 tcttgctggt acagggaacg gggtttaatt ggattaaacc tgaccatttc cgcattgtca
     1561 cgctgcctta cgtccatcag attgaagagg cgatgggcag gttggcaaga ttcctgcaaa
     1621 cctaccgcca ataaggggac ggtttgtctg ccgaggataa aaaatgccgt ctgaaacgga
     1681 gattcccgtt tcagacggca ttttcaacag caggaacgaa tcaggcaaat ttcagtctgt
     1741 cgccgtcggc ttctaccctg atttcgcttt cgggcgcata gtttccggca agcagggctt
     1801 ttgccagcgg gttttcgatt tccgactgga tggcgcgttt gagcggacgt gcgccgtaaa
     1861 tcgggtcgaa accggctttg gcgatgatgt ccagagcggc atcggaaaca gtcaggcgga
     1921 ggttttgttt ttccaaacgt ttttccaagc ctttgagctg gattttcgca atgttgcgga
     1981 tattatcctg atccagtccg tggaacacga ccacttcgtc gatgcggttg atcatttcag
     2041 gacggaaatg ttctttcaca tcctccatca caacttcttt taccgcttcg taatcctgaa
     2101 tgcccatttg ttggatgtgc tggctgccga tgttggaagt catcacaatc acggtatttt
     2161 taaaatctac cgtcctgcct tgcccgtcgg tcaaacgacc gtcatccaat acttgcagca
     2221 ggatgttgaa cacgtccgga tgggcttttt ccacttcatc caaaagaatc acgctgtatg
     2281 gtttgcggcg gacttgctca gtcaggtagc cgccttcttc gtagccgaca tagcccggag
     2341 gcgcaccaat taggcgggca acagcatgtt tttccatgta ttcggacata tcgatacgaa
     2401 tcagatgatc ttcgctgtcg aacaggaagc ctgccaatgc cttgcacaat tcggtcttac
     2461 ccacgccggt cgggcccaag aacaggaagc tgccgtaggg tttattcggg tcggcaagac
     2521 cggaacggct gcggcggata gcgtcggaca cggcacgcac ggcttcgtct tgaccgacta
     2581 cgcggcggtg caacacttct tccattttca gcaacttgtc acgttcgcct tccatcattt
     2641 ttgacacagg aatgccggtc atacgggaaa caacttctgc gatttcctct gcgccgacat
     2701 tattacgcaa gagtttgttt gccggttttg tgctgtccgt atctgcccgt tcggcggctg
     2761 cacgctgttt ttccaaatgc tccaaatctt catacatcaa ttttgaagcc agtgccaaat
     2821 cgccttgccg ttttgcctgt tcgattttaa ttttgacttc gtcaatttgt ttcttaatat
     2881 tagcagcacc gtctgaaatt gctttttcgg ctttccagat ttcgtctaaa tcggcgtatt
     2941 ctttttgcag accgttgatt tcctcgtcta tcagttccaa acgttttttg ctggcatcgt
     3001 ctttttcttt ttcaacgtgc gccttttcca tccgaagctg aattagacgg cggtcgattt
     3061 tgtccattgc ttccggcttg gtttcttttt ccatcttgac acggctggcg gcttcgtcaa
     3121 tcaaatcaat cgctttatcg ggcaggaagc ggtcggtgat gtagcggtcg ctcaactccg
     3181 ctgcggcaac gatagcaggg tcggtaatat cgataccatg gtggatttca taacgctcct
     3241 gtaaaccgcg caaaatagcg atggtgtttt ccacgcttgg ctcgccgacc aatacttttt
     3301 ggaagcggcg ttcgagtgcc gcatcttttt cgatgtattg gcggtattcg tccaaagtgg
     3361 tcgcgccgat acagtgcaat tcgccacgtg ccaaagccgg tttcagcata ttgcccgcat
     3421 ccatcgcacc gtcggttttg cctgcgccga ccaaagtatg gatttcgtcg atgaaaatca
     3481 gagtgttgcc gtcgtctttc gccaaatcgt tcaacacgcc tttcaagcgt tcttcaaatt
     3541 cgccgcggta tttcgcgccg gcaatcaaag ccgccaagtc cagaaccaaa aggcgtttgt
     3601 tacgcaggga ttcaggcact tcgccgttga cgatacgttg cgccaagcct tcaacaatgg
     3661 cagttttacc cacgcccggt tcgccaatca gcacggggtt gtttttggtg cggcgttgca
     3721 gcacttgaat cgcgcggcgg atttcgtcgt cacggccgat aacggggtca agtttgccgt
     3781 cgcgggcgcg ctgggtcagg tcaagcgtat attttttcag cgcatcgcgt tggtcttcgg
     3841 cattggcatc gttcacgttt tgtcctcctc gtaccgcatc gattgcggca ttgatgtttt
     3901 gttcggtcgc gccggcttct ttcaaaattt tgccggccgc atcgttctgc tgcaccaagg
     3961 caagcaggaa aagttcactg gcgatatagg catcgccgcg tttggttgcg gctttgtcca
     4021 tcaggttcaa caccgcctgc aattcgcggc tgggcagaat gtcgccgccc tggccggaca
     4081 ctttcggcag gctgttcaaa tgctgctgca aacgctgttt cacctgcggc acgttcacgc
     4141 ccgaatgcgc cagcaacgcg gcggctccgc tgttttggtc gtcaagcagg gcttttaaca
     4201 caaagcctgc ttccagatag ctgccgtccg cagccaacgc caaactctga gcttctgcaa
     4261 gggcttgttg gaatttggcg gttaatttgt cgtatcgcat ttttgtttcc ttttcaaaat
     4321 gtccgctgtc gaagcctata tgtgcataat tgtggataac tcaagttctg ttttctgttt
     4381 ttctatattt aattcgatat atcattgaat ttaaagtata taaaaatgta taataatgtg
     4441 tataactata tcttcttaat atggaaaagt ctgttgtcgg ctggatgtag gtggcaaatc
     4501 gggtataatc ggcacatctt tttccctttc agacggcatt gatgccgcaa ggacatttta
     4561 tgagcaaaaa acgagttctg accggcgtaa ccaccaccgg catcccgcat ctgggcaact
     4621 acgtcggtgc tatccgcccc gccgtccgcg cggcgcaaaa ccctgatacc gaatccttcc
     4681 tcttcctcgc cgattaccac ggtatcatca aatgccacga gccggagatg attcaccaat
     4741 ccacccaagc cgttgccgcc acttggcttg cctgcggact cgaccccgag cgcaccacct
     4801 tctaccgcca aagcgacatt cccgaagtga tggaattgaa ctggattctg acctgtatca
     4861 ccgccaaggg tttgatgaac cgcgcccacg cctacaaagc cgccgtgcag gcaaattcag
     4921 aaaacaatca ggaagatccc gatttcggcg tggaaatggg tttgttcagc tatccgattc
     4981 tgatgaccgc cgacatcctt atgttcaacg ccaacgaagt gcccgtcggg cgcgaccaaa
     5041 tccaacacgt cgaaatggcg cgcgacatcg ccggtcgctt caatcaccgc ttccgagaac
     5101 tctttaccct gcccgaagtg aaaatcgacg aaaacgtcga actcttggtc ggtttggacg
     5161 gacgcaaaat gtccaaatcc tacggcaaca ccattccgct ttgggaaaac gacaaaaaaa
     5221 cccaaaaatc ggtcaacaaa atcatcacca atatgaaaga gccgggcgag ccgaaacagc
     5281 ccgacgaaag cccattgttt gaaatctaca aagccttctc cacgccgtct gaaacggtgg
     5341 aatttacgaa aatgcttgcc gacggcttgg cttggggcga ggcaaaaaaa cttttggcgg
     5401 cgaaaatcaa cgccgaactc gccgaaccgc gcgaacgcta caacgagctg accgccgacc
     5461 cttcgcaaat cgaagagatt ttgcaggcag gcgcgcaaaa agcgcgtaaa gaagcacgcg
     5521 aattgttgga caaagtacgc gatgcggtcg gcatccgccc gttgaaataa acccaatgcc
     5581 gtccgaacct cttaaaggct tgccggaaca aaacgtcgtc cggctgaccg gcaagcatcc
     5641 caacgacttg gaagccgtca gcggcaaatg catggaaacc gacgataagg gcggtccggt
     5701 aggctgggcg gaaaacggcg tgtgccatac cttgtttgcc aaactggtgg gcaatatcgc
     5761 cgaagacggc ggcaaactga cggattacct gatttcgcat tccgccctgc aaccctatca
     5821 ggcaggcaaa agcggctatg ccgccgtgca gaacggacgc tatgtgctgg aaatcgacag
     5881 cgagggggcg ttttatttcc gccgccgcca ttattgaggt attcggacat cccggaatat
     5941 atttgggttt ttcaaaccct gcaggaaaaa gtccgcaccg tcgggaaact caaaaggagg
     6001 gggatatgtg ttacaatttt ccgaactgtt ttcataaaat agttttcgga cgtgtttcaa
     6061 tatggcattg atgccgcctt attgttcgag aaaaaaacct ttatatttaa atataatggg
     6121 ttttaactaa acgggaaacc gttttctctc cggccgatgg gcaaaatcag ccgattgatg
     6181 gaacacggtc cgatttttaa gcaaaacctt aatcaacaac tcaagaagga taagacatga
     6241 aaaaattatt gattgccgca atgatggcgg ctgccttggc agcttgttcg caagaagcca
     6301 aacaggaggt taaggaagcg gttcaagccg ttgagtccga tgttaaagac actgcggctt
     6361 ctgccgccga gtctgccgct tctgccgtcg aagaagcgaa agaccaagtc aaagatgctg
     6421 cggctgatgc aaaggcaagt gccgaggaag ctgtaactga agccaaagaa gctgtaactg
     6481 aagccaaaga agctgtaact gaagccaaag aagctgtaac tgaagcagct aaagatactt
     6541 tgaacaaagc tgccgacgcg actcaggaag cggcagacaa aatgaaagat gccgccaaat
     6601 aatttgttgc cttggcaaaa atgatgggat gccgcctgcc ggcaacccaa acgaaaccgc
     6661 ctgaagattt tcaggcggtt tttgagttgt atgccccttg ttttttacgc ctgcatgacc
     6721 gttccgagca gatgtgccgc gcatatcggg atgttgcgga caggcaaatg ccgtctggac
     6781 agggtttgga cggcatttgt tccgtaaggt tcagacgacc tcgactttaa acggcatatt
     6841 gattttttgc cattggacgc tttcatattc caatgcgtcg gcaatcaggg gatggcgttc
     6901 cagccattcc ctgtcaatac gcaggatgaa gccgcagctt tccgtatccg tgcgcaactg
     6961 catatttttc gggaaagaca ggtcttggcg cgaacggcag aacagggcag caaggcgcag
     7021 ggacaaaacg gcataccaca acatttcgtt ggtgccgatg atgccgctca tttttttcat
     7081 atcgccgcga tgaccgatga ccagttgggc aagtatggtc tgttctttgc gtgagaaacc
     7141 cggcatatcg gcgttttcga ggatgtaggc ggaatgcttg tgatagccgg tgtgggcgat
     7201 gtccaaaccg atttcgtgca gcgcggcggc gcgtccgaga tactgttgcc acaaggcaag
     7261 ctcttgaact gtaacgtttt tagcgtggca gaggctgtcc ataaaggttt gcgcggtctc
     7321 ggcggtgcgt ttcgcctgat tgaggctgac gtggtagcgg tgttggaact cggcaaccgt
     7381 ttgtccgcgc atatcttcgt ttaaaccgcg cccgatcaaa tcgtaaaaca cgccgtcgcg
     7441 cagggcggct tcggttacgg tcatcctgtc gagtttcatt tcctcaaacg ccgccatcat
     7501 cacggcaagt ccgccggcaa aaacttcgat gcgttccggt ttcaggtttt caaatttggc
     7561 ttttttgacc gaaccggctt cgatgatgcg ttcggcgagg gcgcgcatgc ctttgtaggt
     7621 aatgtccgcc tcttggggca tttcggcggc aagcacgtcg cggatggatt ttgccgaacc
     7681 cgatgtgccg acggcgaaat cccaaccttc gcgcctcata tttttgctga tgcgctggat
     7741 ttcgttgcgg gcggcggaaa tggcagattg gaagtctttg gcggtgattt tgttttggaa
     7801 gaagcgcagg ctgtaggtta cgcagcccaa gggcaggctt tcagtaatgt cgggattcag
     7861 cgtcgagccg atgacaaatt ctgtcgaacc gccgccgatg tcgataacca gcattttgcc
     7921 gccgcccggg gggagggtgt ggatcacgcc ggtataaatc agccgcgcct cttcgcgccc
     7981 ggcgatgatt tcgatgggga aacccagtgc cgcttcggct ttgggaagga aatctgcgat
     8041 gtttttggcg acgcggaatg tattggttgc cacggcgcgt acctgttcag ggcggaagcc
     8101 gcgcaggcgt tcgccgaatt ttgccagaca gtccaaagcc tgttcttggg aagcggcact
     8161 caggtttttc tgttcgtcca gtccggcggc gaagcgcacc atctgtttga acgaatcgat
     8221 gacttttaat tgtccgttgt tgttttcgca aatctggagg cggaaactgt tggaacccaa
     8281 atcgacggag gcgaggatgt ttgcgggggt ggtggtcatg gcggatatcg gtgggggaaa
     8341 aacgcaatgt tactctgacg gcgcaggcgt tgacaataaa tgatgcggcg gtttttgatt
     8401 ctgtccacgg atgttgccga cggcattttt tgcgcttatt tgaaatcctt ttccacgctc
     8461 atgaaaatct gcgtgttttt gcgtgtgtaa aaacttttca tattgctgtc gattttcaga
     8521 tagcggaaat tgagttgcgg cgtaaagccc ttccaagaga ttttgtcgtg ccaaaacgac
     8581 aggtttgcct gatattcgtg gtctttgcgc gggaagcggt acacaatggt cccgggcgcg
     8641 tcaaacgtcc tgcgtgtata gcgcaggttt gcccgcagac ccaagccgcc gtcgaacgtt
     8701 ttgaccgcgc cgatacgcaa acccttgcgg acggaagcct gttccgcctc cttcgtcaag
     8761 tcgtgcgacc agtccgcccc gccgtaaagc agccagtctt tcggcgcgga atacatcagc
     8821 gtcgcgcccg ccagcggcat atggctgtcg tatcgggcgg cggtgcggtc ttcctgataa
     8881 tgcttccaca tattgcccgc gtttagtgtc aaccgccagc gttcgctcaa gtgttgggag
     8941 aaatcggcat taaagccgcc gacgaaattg tatcggctgc cgcctaagag gttttgcccg
     9001 acaaacggca cgatgccgaa cgagcgcgtt accgaacgat ttttatagcc gagcgacagg
     9061 tgcaggcact gttcgctgaa atctttgtta tcccaataat gcacgccgcc gccgctgatg
     9121 ccgccgtaga ggaaatgatg cccgcccgca ttgatttcgc gcgacacgcc taagccctag
     9181 cgcaaaccgt gtgccttttg cggcaggctg tcggcggttt tcgtccagct tctgcccgca
     9241 aattcaatcg tttttttgga cgaagcgttg tttatagcgg attaacaaaa atcaggacaa
     9301 ggcgacgaag cctcagacag tacagatagt acggaaccga ttcactcggt gcttcagcac
     9361 cttagagaat cgttctcttc gagctaaggc gagacaacgc cgtac
//
LOCUS       DAWGKF010000073         9346 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.073, whole genome shotgun sequence.
ACCESSION   DAWGKF010000073 DAWGKF010000000
VERSION     DAWGKF010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9346)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9346)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9346
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.073"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(605..712)
                     /locus_tag="WHR07_001212"
                     /pseudo
     CDS             complement(605..712)
                     /locus_tag="WHR07_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(1085..1753)
                     /locus_tag="WHR07_001213"
     CDS             complement(1085..1753)
                     /locus_tag="WHR07_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ2130428.1"
                     /translation="MKNLAIFDLDNTLINTDSDHAWPQYLIKKGLVDAAETEAQNEKF
                     YRDYQNGCLDIDAFLKFHLAPLARYSKEELAEFHREFMAEYIIPHISPMQRMLVQSHQ
                     MAGDETLVISSTNEFIITPVCHLFGITNIIGTQLESGSDGRYTGNYIGTPSLKEGKIT
                     RLNQWLAERGETLESYGKTYFYSDSKNDLPLLRLVDEPVAVNPDAELEKEAKEKGWPV
                     LNFK"
     gene            complement(1750..2418)
                     /gene="hda"
                     /locus_tag="WHR07_001214"
     CDS             complement(1750..2418)
                     /gene="hda"
                     /locus_tag="WHR07_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HEZ2130429.1"
                     /translation="MNQLIFDFAAHDYPSFDKFLGTENAELVYVLRHKHGQFIYVWGE
                     EGAGKSHLLQAWVAQALEAGKNAAYIDAASMPLTDAAFEAEYLAVDQVEKLGNEEQAL
                     LFSIFNRFRNSGKGFLLLGSEYTPQQLVIREDLRTRMAYCLVYEVKPLTDQEKIDALA
                     SMAAARQVTVDSEIFEYLLKHWRRDMDSLMMMLDTLDNYAVTMGKRITLPLLRQLLKQ
                     QETQ"
     gene            complement(2523..3140)
                     /locus_tag="WHR07_001215"
     CDS             complement(2523..3140)
                     /locus_tag="WHR07_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ2130430.1"
                     /translation="MVWPEYSPQENVALFRHNGEILLSGINIKLKSGDSLLIRGPSGC
                     GKTSLLCALAGLWPFGSSGKVSRPPHQDILFLPQRPYTAQGSLRDAVCYPDIDKQHPE
                     LAEAMNTCRLGYLIDKLDKTADWQHKLSPGELQRVAFVRALLSKPKIVLLDEATAALD
                     EPAEAALYRALKQKLPDSIIISIGHRSTLNTFHNMHLNVGNVACD"
     gene            complement(3495..4394)
                     /locus_tag="WHR07_001216"
     CDS             complement(3495..4394)
                     /locus_tag="WHR07_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ORF6C domain-containing protein"
                     /protein_id="HEZ2130431.1"
                     /translation="MPALTVTWMIYTKYLVYQIYLVIFCGVFMERIDLALNLVEERSR
                     LGYSRKNFAEQTGCSAESLRLYESGQVNIPADFLLAAVQLGVDIQFVFTGIHSANLNA
                     VSDDLNKKLDDAIGKSNVENQINGNVSNAVIASSGSVVHQINTQNHVIRTRVDSKPGK
                     EHITLEQASKLQQLVKQVAAAEEIAKRSPKSIRAIWASLNAHCKVPSYKLIALSDYDK
                     AETYLRKWLGRLSNTATSKNNDPDWRKKKYAYIKLNVKQLELEDWLKSYLEKNFSVES
                     LTELSDEDLQKTYAAVSTKKRKK"
     gene            4438..4689
                     /locus_tag="WHR07_001217"
     CDS             4438..4689
                     /locus_tag="WHR07_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ2130432.1"
                     /translation="MQANEIYKSLEEKNISARMLASALGVTNQSVSEVIRNGRGSKRI
                     AEAIAKVIQKDLVEVFPHYKKTDCRDKKIAELKEMLGVG"
     gene            4691..6670
                     /locus_tag="WHR07_001218"
     CDS             4691..6670
                     /locus_tag="WHR07_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ2130433.1"
                     /translation="MEYMDLKSLLNFGLPNMPRTVIGLRKKAQRDGWQTRRRQGKGGG
                     VEYALPAEIRAAIMKRQSDELAEKMPKTLPQVRPGTAMSAQALAEAAKLLNEKQRSVA
                     DARCAVVAAVLGIKYQYDCSAKAAVAQFLGLLAEGKLDAVTLGNLEKANDRSRSAKVG
                     ERTLDGWISAYLKAENATERLVALAPKTTKAVKPIESYGWLPMFMQFHNIPSAPKLAH
                     SYRRFVQWAEAENMPVNDVPNLSMVRRVWDKLPLIMQERGRKTGAAYKSLLPYVKRDW
                     GALKPNDVWIGDGHSFKAKVAHPVHGRPFKPEVTVIIDGCTRFVVGFSVSLAESCVAV
                     SDALRIGVKHFGLPIIYYSDNGGGQTGKTIDHEITGITSRLGIRHETGIAGNPQGRGI
                     IERWWKDNLIEMARQYETFAGAGMDSSTKNLMYRKMESAFNALEKGKDLTEEQQKYLK
                     KLPGWSRFIADVVKCIDEYNNRPHGELPRHPDGGHYSPKAYREMRLEQDGIAPDMLSA
                     QELATMFMPQEVRKVQRGWLDLFNNSYFSVELAEYHKDEVRVSYDLSDASAVNVFDMD
                     GKFITKAQANGNTREAFPTARIDQLAEKRRKGKIKRAENAIKLANAEVNPALEQAAVW
                     DELGHLGGNVIEAEYAVLPKTGTDDGIFLFEADRS"
     gene            6706..7620
                     /locus_tag="WHR07_001219"
     CDS             6706..7620
                     /locus_tag="WHR07_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEZ2130434.1"
                     /translation="MKQINQALQQKLAEFKEKSGMSQTQLARGIGTSPASVSMYLNGT
                     YAEKGGNYETIEPKIEAFLEMQDSKAKREELVLGFVSTKTTRRIVEAMRNAHEGGEIS
                     VIYGQAGLGKTQAVKNYCEKNPAAILIEANPSFTALVLMRKLATAAKVSAMGSLNDLF
                     ESVSDRLRDSGHLIVVDEAENLPLRALEIIRRLHDETGCGLVLSGMPRLVANLRGKYG
                     ELVQLHSRVAGALNLGDTMPDAELEQIARATLPEADDETIAELVKHSNGNTRRMSKLM
                     RGSVRVANKNGIRMQAGIVKKYSTLIIR"
     gene            7710..7976
                     /locus_tag="WHR07_001220"
     CDS             7710..7976
                     /locus_tag="WHR07_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130435.1"
                     /translation="MQVLKKVDWKMFVARSFWQCVPVGLTAGVWCFVAGMALHSCAKE
                     PEPVAKEPTKVEAMERQADLEVKVWEGQYESMSVEEKMKGIVYE"
     gene            8085..8258
                     /locus_tag="WHR07_001221"
     CDS             8085..8258
                     /locus_tag="WHR07_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130436.1"
                     /translation="MSFGRRNTDWQAWGQHRRRATARMAQKSREREIEEYQAQFEDKD
                     GKGRLKTEGNKDE"
     gene            8251..8418
                     /locus_tag="WHR07_001222"
     CDS             8251..8418
                     /locus_tag="WHR07_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130437.1"
                     /translation="MNEKDLIEWLEDRGELMVMKKDGEGFVIAARAPDGMWKTAEAET
                     LAQAITLWEEV"
     gene            8482..8709
                     /locus_tag="WHR07_001223"
     CDS             8482..8709
                     /locus_tag="WHR07_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130438.1"
                     /translation="MKVYVFKISNENGKLKIELPEIPMGKQIDEVDLIAGLTTEFIAS
                     MLRDAQKDRRKFVIDASNQLAAIQTYQKIFN"
     gene            8724..9242
                     /locus_tag="WHR07_001224"
     CDS             8724..9242
                     /locus_tag="WHR07_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host-nuclease inhibitor Gam family protein"
                     /protein_id="HEZ2130439.1"
                     /translation="MAKTRIKQPAIEAAQDKTEVTAFIRQIGDLQREVKRLETEAGDK
                     KAAIEEEYAAKAAPMCAEIMSLTERVAAYCEAHKDELTENGKTKTVDFTTGLIKWRIR
                     PPSVKVTGVAAVLAWLSEKSAFAEFVRTKKEIDKDTILNQKECFSDGQVPGIKIVSGV
                     EDFVIEPSEQIL"
BASE COUNT         2494 a         1860 c         2609 g         2383 t
ORIGIN      
        1 gtcgccttgt cctgattttt gttaatccac tatacgtcct agattcccac tttcgtggga
       61 atgacgggat gtgggttttt gtgcggattt gaaccggtaa gggtggtgtg ggattggtgg
      121 tttgcttagg atcttttgga ttgtattttg tatatacatt tacttgttga taaaagataa
      181 aataaaatta gaaactaaaa gtgagaaaaa attaataata atagggatgt ataaatgtaa
      241 agactccgtt tcatagctaa ggttatctga atatatggaa aaaaagtaaa agtccataaa
      301 actaaaatat atagataatg ctaatgataa tagaattatc actttcctag agtaaggata
      361 atattttttt atcgtaaaaa aatataaaat aggataaata attgccatat agatagattt
      421 tgtaacaaaa ttaaaaataa ataataaaaa taatgtaata aagtatattt tttggctatg
      481 aaataaaatt gtacataatt gaacgagcag atcaaaaaat gaactacata taacaataaa
      541 taataacgta tttaccatac taaatttaat aggtctcatt atcatattta ataaccactt
      601 catagtatag tggattaaat ttaaaccagt acagcgttgc ctcgccttgc cgtactatct
      661 gtactgtctg cggctttgtc gccttgtcct gatttaaatt taatccacta taaattttaa
      721 tccactataa atgcagagtg ggtggaaaca ctcactttat ggtttgctac gctctgctca
      781 attagcaacc cgataaccca atatggataa tagggtaatt aatccaatct aatttgtcag
      841 catccgttaa tttattgcaa aataaagtat tgaattatgt cgggtgcaaa tgatgaaata
      901 taagtttccg tgcggacgga tcaagattcc cactttcgtg ggaatgacgg tggaaagatt
      961 gttgtttttc ccgatgaatt cctgtgtttt ttgtttttcc ggataaattc ctgtggcttt
     1021 gagttttttg gatttcagcc tcaatgccgt ctgaacgccg aatcgggctt cagacggcat
     1081 tgcgtcattt gaaattcaaa accggccagc ctttttcttt ggcttctttt tccagctcgg
     1141 catcggggtt gacggcgacg ggttcgtcga cgaggcgcag cagcggcagg tcgtttttgg
     1201 agtcgctgta aaaataggtt ttgccgtagc tttcgagcgt ttcgccgcgt tcggcgagcc
     1261 attggttcag gcgggtgatt ttaccttctt tgaggctggg cgtgccgatg taattgccgg
     1321 tgtagcggcc gtcggaaccg gattcgagtt gtgtgccgat gatgttggta atgccgaaaa
     1381 ggtggcagac gggggtgatg atgaactcgt tggttgagga aatcacaagg gtttcgtcgc
     1441 ctgccatttg gtggctctgc accagcatac gctgcatagg cgagatgtgg gggatgatgt
     1501 attccgccat aaattcgcgg tgaaattccg ccagctcttc tttgctgtaa cgggcgagcg
     1561 gggcgaggtg gaatttgagg aatgcgtcga tgtcgaggca gccgttttgg tagtcgcggt
     1621 agaatttttc gttttgcgct tcggtttcgg cagcgtcaac caagcctttt ttgatgaggt
     1681 attgcggcca ggcgtggtcg gaatcggtgt tgatgagggt gttgtcgagg tcgaagatgg
     1741 cgaggttttt cattgggttt cctgttgttt caaaagctgg cgcaaaagcg gcagggtgat
     1801 gcgtttgccc atcgtgacgg cgtagttgtc cagcgtgtcg agcatcatca tcaggctgtc
     1861 catatcgcgc cgccagtgtt tgagcaggta ttcgaaaatt tcggaatcaa cggttacttg
     1921 gcgtgccgcc gccatactgg cgagcgcgtc gattttttct tggtcggtca ggggtttgac
     1981 ttcgtaaacg aggcagtaag ccatacgcgt ccgcaaatct tcgcggatga cgagctgctg
     2041 gggcgtgtat tccgaaccga gcagcaaaaa gcctttgccg ctgttgcgga agcggttgaa
     2101 gatggaaaaa agcagggctt gttcttcgtt gcccagcttt tcgacttgat cgacggcgag
     2161 gtattccgcc tcgaacgcgg catcggtcag cggcatggag gcggcatcga tataggcggc
     2221 gtttttgccg gcttcgagcg cctgtgcgac ccacgcctgc aaaagatggc ttttgcccgc
     2281 gccttcttcg ccccaaacat aaatgaattg tccgtgtttg tgtcggagga catagaccag
     2341 ttccgcgttt tccgtgccga ggaatttgtc gaaactcgga tagtcgtgtg cggcaaagtc
     2401 gaaaataagc tggttcacgg ttcggcattc cgaggggtgg taaacgggtt tattgtacgt
     2461 tgttttcgcg cgcctttcca atttgaacga tgccgtctga aaacggcttc agacggcatc
     2521 gttcagtcgc aggcaacgtt gccgacattg aggtgcatat tgtggaacgt gttgagcgtg
     2581 cttcggtgtc cgatgctgat gatgatgctg tcgggcagtt tttgctttaa ggcgcggtag
     2641 agtgcggctt cggccggttc gtccaaggcg gcggtggctt cgtcgagcag gacgattttg
     2701 ggcttggaaa gcagggcgcg gacgaaggcg acgcgttgca gttcgccagg ggagagtttg
     2761 tgctgccagt cggctgtttt gtccaatttg tcaatcagat aacccaagcg gcaggtgttc
     2821 atggcttcgg ctaactcggg atgctgtttg tcgatgtccg gataacaaac cgcgtcgcgt
     2881 aggctgcctt gcgccgtgta cgggcgttgc ggcaggaaga ggatgtcttg atgcggcgga
     2941 cggctgactt tgccgctgct gccgaacggc caaagcccag ccagcgcgca cagcaacgaa
     3001 gttttgccgc aaccgctcgg gccgcgtatc agcagggaat cgccgctttt gagtttgatg
     3061 ttgatgccgc tcaacaggat ttcgccgttg tggcggaaca gagcgacgtt ttcctgtggg
     3121 gaatactccg gccataccac tcaacacggc ctatgatggc gatgtcgtct tgggtattac
     3181 tcaaatctat ttcaaacggt gcgtaacgtg gattttcaga cgttacaagc agtttgcccg
     3241 gtatacgttg cacacgtttg acaaagaggt cattgcctat acgcaagaca tataggccgt
     3301 cgcgcggctc ggtttcggcg tggttgatta gaatgtttat aaaaggcttt aactagaaac
     3361 tgaacatgga acttgtataa tagttccatg tttgaaaaaa tcttttaata tcatacatct
     3421 aaaaaaacaa agcatctgaa gaccataagc taaacatgaa acttgaattt aaaggcggag
     3481 tttcatgttt aagcctattt tttccgtttt ttagtcgata ctgctgcata tgttttttgc
     3541 aaatcttcat cacttaattc agtcaggctt tctactgaga aatttttttc gaggtaactt
     3601 ttcaaccaat cttcaagctc aagctgtttt acatttaatt tgatataagc gtatttcttt
     3661 tttcgccagt cgggatcgtt gttctttgat gttgctgtat tgctcaacct acccagccat
     3721 tttctgagat aagtttctgc tttgtcgtaa tcgctcaatg cgattagttt gtaacttgga
     3781 actttacagt gagcattcag actagcccaa attgcacgga ttgattttgg cgaccgtttg
     3841 gcaatctctt ctgctgcggc aacttgttta acaagttgtt gcagctttga agcttgctca
     3901 agcgttatat gttccttgcc gggttttgaa tcgacacggg ttctgatgac gtgattttgg
     3961 gtattaattt gatgaacaac cgaaccagat gaggcgataa cagcgttact gacgttgccg
     4021 ttaatctgat tctcaacgtt tgatttgcca atagcgtcgt ccaatttttt attaaggtcg
     4081 tctgaaacag catttaaatt tgccgaatga atgcctgtaa agacaaattg aatatccacc
     4141 cctaattgga cagcagcaag taaaaagtcc gcaggaatgt tgacctgccc gctttcatac
     4201 agtctcaaac tttctgcact acatccagtt tgctcagcaa aattctttcg agagtatcca
     4261 agtcggcttc tctcttcaac taaattcaat gctaaatcaa tgcgttccat aaaaacaccg
     4321 caaaatatta ccaaatatat ttggtatacc aaatattttg tgtatatcat ccaagtaaca
     4381 gttaaggcag gcattaaagc ctgtaaggta agtaatggat tctatcatgg aggcattatg
     4441 caagcgaacg aaatctataa atccttagaa gaaaaaaata tatcggcaag aatgttggct
     4501 tcggctttag gggtaactaa ccaatctgtt tctgaggtca taagaaatgg acgaggaagc
     4561 aaaagaattg cggaggcaat cgcgaaagtg attcaaaaag atttagttga agtttttccg
     4621 cattacaaga aaacagattg tcgagacaaa aagatagctg aattgaaaga gatgctcgga
     4681 gtgggttgaa atggaatata tggatctcaa aagcctgctt aattttgggt tgccaaatat
     4741 gccaagaaca gtaatagggc tgagaaaaaa agcgcaaagg gatggttggc aaacgagaag
     4801 gcgtcaaggt aagggtggtg gtgttgaata tgccctccct gccgaaatcc gagcagccat
     4861 catgaaacgg cagtcggacg agctggcgga gaagatgccg aaaaccctgc cccaagtcag
     4921 accggggacg gcgatgtcgg ctcaggcact ggctgaagcg gccaagctgt tgaacgagaa
     4981 acaacggtcg gtggcggatg cgcgatgtgc ggtggtggcg gcggtgttgg ggattaaata
     5041 ccaatacgat tgctctgcca aggctgcggt ggctcagttt ttgggcttgc tggcagaagg
     5101 taaattggac gcggtcacgc ttgggaactt ggaaaaggcc aatgaccgca gccggtcggc
     5161 gaaggttggc gaacgtactt tagacggctg gatttctgct tatttgaaag cggaaaacgc
     5221 gacggagcgg ttggttgctt tggctccgaa gacgacgaag gcggtcaagc cgattgaaag
     5281 ttacggatgg ttgccgatgt ttatgcagtt tcacaatatt ccgtccgcgc caaagctggc
     5341 gcacagctac cgccggtttg tgcagtgggc ggaagcggaa aatatgccgg tcaatgatgt
     5401 gcctaacttg agtatggtgc ggcgcgtttg ggacaagctg ccgctgatta tgcaggagcg
     5461 cggcaggaaa acgggggcgg cttataaatc gctgctgcct tatgtgaaac gtgattgggg
     5521 ggctttgaag ccgaacgatg tttggatcgg cgacggccac agctttaagg cgaaggtggc
     5581 tcatccggta cacggcaggc cgtttaagcc ggaagtgacg gtgattattg atggttgtac
     5641 gcggtttgtg gtgggttttt cggtgtcgtt ggctgaaagt tgtgtggcgg tatcggacgc
     5701 tctgcgtatc ggggtcaagc actttggttt gccgattatc tactactcgg ataacggtgg
     5761 cggccaaacc ggcaagacga tagaccatga aatcacgggt attacgtccc gattgggtat
     5821 ccggcatgaa acgggtatcg cgggcaaccc gcaaggccga ggcatcatcg agcgatggtg
     5881 gaaagacaat ctgattgaga tggcgcgcca gtatgagacg tttgcgggcg cggggatgga
     5941 cagcagtacc aagaacctga tgtaccgcaa gatggaaagt gcgtttaacg ctttggaaaa
     6001 aggcaaggat ttgacggagg aacaacagaa atatttgaaa aaactgccgg gctggtcgcg
     6061 ttttatcgcg gatgtggtca agtgtatcga cgaatacaac aaccgcccgc acggcgagct
     6121 gccccgacat ccggacggcg ggcattattc gccgaaggct tatcgggaaa tgaggctgga
     6181 acaggacggt atcgcgccgg atatgttgtc ggcgcaagag ctggcgacga tgtttatgcc
     6241 gcaagaggtg cgaaaggtac agcgcggttg gctggatttg ttcaacaact cttatttttc
     6301 ggtggagctg gcggagtatc acaaagacga ggtacgggtc agctacgatt tgagcgatgc
     6361 gtcggcggtc aatgtgtttg atatggacgg caagtttatc actaaggcgc aggccaacgg
     6421 caatacccgc gaggctttcc cgacggctcg tatcgaccaa ctggcggaaa aacgccgaaa
     6481 aggcaaaatc aagcgggcgg aaaatgcaat caagctcgca aatgcagaag tcaatcctgc
     6541 tttggaacag gctgcggttt gggacgagct gggacatttg ggcggaaacg tcatcgaggc
     6601 ggagtatgcg gtattgccga aaacgggcac ggacgacggg attttcttgt ttgaggcgga
     6661 tagaagttaa aacggtttta aacctctttt aaaaggacta aaaaaatgaa acaaatcaat
     6721 caagcattgc aacaaaaact ggctgaattt aaagaaaaat cgggtatgag ccaaacccaa
     6781 ctggcacgcg gtatcggtac ttcgccggca tccgtcagta tgtatctgaa cggtacttat
     6841 gcggaaaaag gcggcaatta tgaaaccatc gagccaaaaa tcgaggcgtt tttggagatg
     6901 caggacagca aagcgaaacg cgaagagctg gtgttgggtt ttgtatcgac taagacgaca
     6961 cgccgaatcg tggaagcgat gcgcaatgcg cacgaaggcg gcgagatttc cgttatctac
     7021 ggtcaggcgg gtttgggcaa gacgcaggcg gtcaaaaact actgcgagaa aaaccctgca
     7081 gccatcttga ttgaggctaa tccgagcttt acggctttgg tcttgatgcg caagttggcg
     7141 acggcggcga aggtatcggc gatgggcagc ttgaatgatt tgtttgaatc ggtatcggac
     7201 agattgcgtg attcaggcca tctgattgtg gtcgatgaag cggaaaacct gccattacgc
     7261 gcccttgaga ttatccgccg actgcacgat gagactggct gcggtttggt gttgagcggt
     7321 atgccccgac tggtggcgaa tttgcgcggt aagtatggcg agttggtaca gcttcacagt
     7381 cgtgtggcgg gtgcgctgaa tctaggtgat acgatgcccg acgcagagtt ggaacagatt
     7441 gcgcgggcaa ccctacccga agccgatgat gaaacgattg cggaactggt taagcatagc
     7501 aatggtaata cacggcgtat gagcaagttg atgcgcggat cagtacgggt agcgaataaa
     7561 aacggtattc gaatgcaagc gggaatcgtg aaaaaatatt cgacattgat tatccgatag
     7621 gccgtctgaa acggtaagtc tctgacaggg ctatatattt tttaccctat gattttaata
     7681 agttattgtt ttctaaagga aaactcaaaa tgcaagtttt gaagaaagtt gattggaaga
     7741 tgtttgtggc acgctctttt tggcagtgtg tgccggttgg tttgacggcg ggcgtgtggt
     7801 gttttgtggc gggaatggcg ttgcattcct gcgcgaaaga acccgaaccg gttgcgaaag
     7861 agccgacgaa ggttgaggcg atggaaagac aggcggattt ggaggtcaag gtatgggaag
     7921 ggcaatacga gtcaatgagc gtcgaggaaa aaatgaaagg gattgtttat gagtgataag
     7981 ccaattttat tgagccctgc ggcgaaaaaa gaggctttgg cacgggcggt aaaggaaatc
     8041 cgcgcgaaat atggcgataa ggcgattgtg aaaggatgtg tgaaatgagt ttcggacgac
     8101 gtaatacgga ttggcaggct tggggacaac accgcaggcg tgcgacggcg cgaatggcgc
     8161 aaaaaagccg ggagcgcgaa atcgaggaat atcaggcgca gtttgaagat aaggacggca
     8221 aaggtcgtct gaaaacggaa ggaaacaaag atgaatgaaa aagatttaat cgaatggctc
     8281 gaagaccgtg gcgagctgat ggtcatgaag aaggacggcg aaggctttgt gattgcagcg
     8341 cgtgcgccgg acgggatgtg gaagactgcc gaggcggaaa ctttggctca ggcgataact
     8401 ttatgggagg aagtgtgatg tttaagtttt tgagaaaccg cgcgaaagtt gaagcaattt
     8461 taaacaagaa aggaaagtga aatgaaagtg tatgttttta aaattagtaa tgaaaacggt
     8521 aagttaaaga tagaactccc cgaaatccca atgggtaagc aaattgacga agttgatttg
     8581 attgctgggc taaccacgga atttattgca agtatgttac gtgatgccca aaaagatcgt
     8641 cgcaaattcg taatcgacgc atcaaatcaa ttggctgcaa tccagacata tcaaaaaatc
     8701 ttcaattaag gaaggaagag aaaatggcta aaacccgaat caaacagccc gccatcgaag
     8761 cggcacaaga caaaacggaa gttactgcat ttatccgcca aatcggcgac ttgcagcgcg
     8821 aagtcaaacg cctggaaacc gaagccggag acaaaaaagc ggctatcgaa gaagaatatg
     8881 ccgccaaagc cgcgccgatg tgtgccgaaa tcatgagcct gaccgaacgt gtggccgcct
     8941 actgcgaagc gcataaggac gagctgacgg aaaatggtaa aaccaaaacc gtggacttta
     9001 ccaccggcct gattaaatgg cgcatccgtc cgccatctgt caaggtaacg ggcgtggccg
     9061 ccgtcctggc gtggctctcg gaaaaatccg cctttgccga gtttgtccgc actaaaaagg
     9121 aaatcgacaa agacaccatc ctgaatcaaa aagagtgttt ttcagacggc caagttccgg
     9181 ggattaagat tgtgagcggc gtggaggatt ttgtgattga gccgagcgaa caaattctat
     9241 aaaatcaaca gcctgatttc aattcagtgt gttgaaacgt gattgagcct acggagcagg
     9301 agcttgccta gccggttcaa ataggcttta acccatgatt taaagg
//
LOCUS       DAWGKF010000074         9325 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.074, whole genome shotgun sequence.
ACCESSION   DAWGKF010000074 DAWGKF010000000
VERSION     DAWGKF010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9325)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9325)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9325
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.074"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            168..1511
                     /locus_tag="WHR07_001225"
     CDS             168..1511
                     /locus_tag="WHR07_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit A"
                     /protein_id="HEZ2130440.1"
                     /translation="MIKIKKGLNLPIAGRPEQVIYDGPAITEVALLGEEYAGMRPSMK
                     VKEGDAVKKGQVLFEDKKNPGVVFTAPASGKIAAIHRGEKRVLQSVVIAVEGNDEIEF
                     DRYAPDALAKLSGKEVRRNLIQSGLWTALRTRPFSKIPAVDAEPFAIFVNAMDTNPLA
                     ADPVVVIKEAAEDFRRGLLVLSRLTERKIHVCKAAGADVPSENAANIETHEFGGPHPA
                     GLSGTHIHFIEPVGANKTVWTINYQDVIAIGRLFATGRLNTGRVVALGGSQVNKPRLL
                     RTVLGAKVSQITAGELVDADNRVISGSVLNGAIAQGAHDYLGRYHNQISVIEEGRSKE
                     LLGWVAPQPDKYSITRTTLGHFLKNKLFKFNTAVNGGDRAMVPIGTYERVMPLDILPT
                     LLLRDLIVGDTDSAQALGCLELDEEDLALCSFVCPGKYEYGPLLRKVLETIEKEG"
     gene            1514..2746
                     /locus_tag="WHR07_001226"
     CDS             1514..2746
                     /locus_tag="WHR07_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit B"
                     /protein_id="HEZ2130441.1"
                     /translation="MGLKHFLEKIEPHFLPGGKHEKWYALYEAAATIFYTSGAVTRKA
                     AHVRDALDSKRMMILVWLALFPAMFYGMYNVGAQAFGALTPDLLQQSIANDWHYTLAD
                     ALGINMSSEAGVLGKMLFGAIYFLPIYATVFAVGGFWEVLFATVRKHEINEGFFVTSI
                     LFALIVPPTLPLWQAALGISFGVVVAKEVFGGTGKNFMNPALAGRAFLFFAYPANLSG
                     DAVWTAVDGYSGATALAQWAAHGADGLKNAVTGQTITWMDAFIGKLPGSIGEVSTLAL
                     LIGGAFIVFARIASWRIIAGVMIGMIAMSSLFNFIGSDTNAMFAMPWYWHLVVGGFAI
                     GMLFMATDPVSASFTNVGKWWYGALIGVMCVLIRVVNPAYPEGMMLAILFANLFAPIF
                     DYFVAQANIKRRKARSNG"
     gene            2739..3515
                     /locus_tag="WHR07_001227"
     CDS             2739..3515
                     /locus_tag="WHR07_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit C"
                     /protein_id="HEZ2130442.1"
                     /translation="MAKKFDKDSFSGTLIVVLAVSLICSVIVAGAVVGLKPIQEKQKL
                     QDKQGYILSVAGLMDKDTDIGKTFAERIEQRVVDLATGEYVADAPKDFSARIAGKDPA
                     QSIRIKPEDDLAGIKSRAKYTEVYLVKGEDGKIGQIILPMHGNGLWSVMYGFVAIQPD
                     GNTINGITYYEQGETPGLGGEIGNPLWQQKFVGKKLFDGQGKLALHVGKGAGSDKEHG
                     VDALSGASLTSKGVQGSFAYWFGENGYIPYLNKLKSAGAQ"
     gene            3515..4141
                     /locus_tag="WHR07_001228"
     CDS             3515..4141
                     /locus_tag="WHR07_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit D"
                     /protein_id="HEZ2130443.1"
                     /translation="MADMKRLKHLMFSPFIDNNPIALQVLGICSALAVTTKLQTAIVM
                     GISVALVTGFSSFFISLVRNYIPNSIRIIVQMAIIASLVTLVDQLLQAFAYELSKQLS
                     VFVGLIITNCIVMGRAEAFAMKEPPLESLIDGIGNGAGYGIMLLVVATVRELIGSGKL
                     LGYTVFQTVQDGGWYQTNGLFLLAPSAFFIIGFLIWGLRTWKPEQAEE"
     gene            4145..4738
                     /gene="nqrE"
                     /locus_tag="WHR07_001229"
     CDS             4145..4738
                     /gene="nqrE"
                     /locus_tag="WHR07_001229"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit E"
                     /protein_id="HEZ2130444.1"
                     /translation="MEHYLSLFIKSVFIENMALSFFLGMCTFLAVSKKVSTAFGLGVA
                     VIFVLGLSVPVNQLVYSLLKDGAIVEGVDLTFLKFITFIGVIAALVQILEMFLDKFVP
                     ALYNALGIYLPLITVNCAIFGAVSFMAQREYNFGESVVYGFGAGLGWMLAIVALAGIT
                     EKMKYSDAPKGLKGLGITFIAAGLMAMAFMSFSGIQL"
     gene            4752..5969
                     /gene="nqrF"
                     /locus_tag="WHR07_001230"
     CDS             4752..5969
                     /gene="nqrF"
                     /locus_tag="WHR07_001230"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit F"
                     /protein_id="HEZ2130445.1"
                     /translation="MEIILGIVMFTVIVLVLALMILFAKSKLVSEGDITIKVNGEKEL
                     TMPAGGKLLGALANEGIFIPSACGGGGSCGQCRVVVKSGGGDILPTELSHISKREARE
                     GCRLSCQVNVKTDMDIEVPEEVFGVKKWECTVISNDNKATFIKELKLAIPEGEEVPFR
                     AGGYIQIEAPPHTVAYKDFDIPEEYHEDWDKYNLWQYVSKVDEPILRAYSMASYPEEK
                     GIIMLNVRIATPPPRVPDAPPGQMSSYIWSLKPGDKVTISGPFGEFFAKDTDAEMVFI
                     GGGAGMAPMRSHIFDQLKRLNSKRKITFWYGARSKREMFYVEDFDQLAAEFPNFTWHV
                     ALSDPLPEDNWDGYTGFIHNVVYENHLKNHEAPEDCEFYMCGPPIMNQSVIKMLKDLG
                     VEDENILLDDFGG"
     gene            6121..7176
                     /locus_tag="WHR07_001231"
     CDS             6121..7176
                     /locus_tag="WHR07_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEZ2130446.1"
                     /translation="MPSETRLPNFIRVLIFALGFIFLNACSEQTAQTVTLQGETMGTT
                     YTVKYLSNNRDKLPSPAEIQKRIDDALKEVNRQMSTYQPDSEISRFNQHTAGKPLRIS
                     SDFAHVTAEAVRLNRLTHGALDVTVGPLVNLWGFGPDKSVTREPSPEQIKQAASYTGI
                     DKIILKQGKDYASLSKTHPKAYLDLSSIAKGFGVDKVAGELEKYGIQNYLVEIGGELH
                     GKGKNARGEPWRIGIEQPNIVQGGNTQIIVPLNNRSLATSGDYRIFHVDKSGKRLSHI
                     INPNNKRPISHNLASISVVADSAMTADGLSTGLFVLGETEALKLAEREKLAVFLIVRD
                     TGGYRTAMSSEFEKLLR"
     gene            7202..7417
                     /gene="nqrM"
                     /locus_tag="WHR07_001232"
     CDS             7202..7417
                     /gene="nqrM"
                     /locus_tag="WHR07_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Na+)-NQR maturation NqrM"
                     /protein_id="HEZ2130447.1"
                     /translation="MKTLLLTFGIFLTVIIGMAVGYIFSKRTIKGSCGGITALGMKKM
                     CDCDTPCDTLQKKLDEEKQAGGIRVDR"
     gene            complement(7541..8119)
                     /gene="grpE"
                     /locus_tag="WHR07_001233"
     CDS             complement(7541..8119)
                     /gene="grpE"
                     /locus_tag="WHR07_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEZ2130448.1"
                     /translation="MSEQTQQQNSEEAVENVEAVETVETVGNADGVQEQAAAEPAYED
                     LQARIAELEAQLKDEQLRALANEQNLRRRHQQEIADTHKFAGQKFAVEMLPVKDYLEM
                     ALLDQSGNFDALKMGVQMTLNELQKAFDATQIKEINPKAGDKLDPNIHQAMQAVASEQ
                     EPNTVVGVMKKGYTLSDRVLRPAMVTVAQKEA"
     gene            8303..9121
                     /gene="cysE"
                     /locus_tag="WHR07_001234"
     CDS             8303..9121
                     /gene="cysE"
                     /locus_tag="WHR07_001234"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEZ2130449.1"
                     /translation="MKKDHLNTTGFDLWHTIREETAAAVSAEPMLASFLHQTVLRHES
                     LGSVLAYHLSSKLGSPIMDVRALFEIYQQALGSDTQIGKCVEADLKAIYERDPACDEY
                     SLPLLYFKGFHAIQAHRINHRLYLDGRKTLAYFLQNRMSEVFGVDIHPAARFGYGLML
                     DHATGFVAGETAVLGNNISILHGVTLGGSGKEGGDRHPKIGDGVMIGANASILGNIRI
                     GSNAKIGAGSVVVSDVPPSITVVGVPAKPVARSLKTPSADMDQNIQFTEIDFMI"
BASE COUNT         2253 a         2625 c         2313 g         2134 t
ORIGIN      
        1 taaaaacggc ttccgcaagg aaaaaagcag caaatctgac aaacaggtac aattcctgat
       61 agaatctaac actttgctac attaatttat tcaatgcttt tgatgccacg cgacacggta
      121 tcaaaacacg ccgtttttac cttaaccatc acaagtaatg caaatatatg attaaaatca
      181 aaaaaggtct aaacctgccc atcgcgggca gaccggagca agtcatttat gacggcccgg
      241 ccattaccga agtcgcgttg cttggcgaag aatatgccgg tatgcgcccc tcgatgaaag
      301 tcaaggaagg cgatgccgtc aaaaaaggcc aagtgctgtt tgaagacaaa aagaatccgg
      361 gcgtggtatt taccgcgccg gcttcaggca aaatcgccgc catccatcgc ggcgaaaagc
      421 gcgtacttca gtcggtcgtg attgccgttg aaggcaacga cgaaatcgaa ttcgaccgct
      481 acgcgcccga tgccttggca aaattgagcg gcaaagaagt gcgccgcaat ctgattcaat
      541 ccggtttgtg gactgcgctg cgtacccgtc cgttcagcaa aatccctgcc gtcgatgccg
      601 agccgttcgc catcttcgtc aatgcgatgg acaccaatcc gctggcggca gaccctgtgg
      661 ttgtgatcaa agaagccgcc gaggatttca gacgaggttt gctggtattg agccgtttga
      721 ccgagcgtaa aatccatgtg tgtaaagcag caggcgcaga cgtgccgtct gaaaacgccg
      781 ccaacatcga aacacatgaa ttcggcggcc cgcatccggc cggtttgagt ggcacgcaca
      841 ttcatttcat tgagccggtc ggtgcaaaca aaaccgtttg gaccatcaat tatcaagatg
      901 taattgccat cggacgtttg tttgcaacag gccgtctgaa caccgggcgc gtggttgcct
      961 tgggtggttc tcaagtcaac aaaccacgcc tcttgcgtac cgttttgggt gcgaaagtat
     1021 cgcaaattac tgcgggcgaa ttggttgacg cagacaaccg cgtgatttcc ggttcggtat
     1081 tgaacggcgc gattgcacaa ggcgcgcacg attatttggg acgctaccac aatcagattt
     1141 ccgttatcga agaaggccgc agcaaagagc tgctcggctg ggttgcgccg cagccggaca
     1201 aatactccat cacgcgtaca accctcggcc atttcctgaa aaacaaactc ttcaagttca
     1261 acacagccgt caacggcggc gaccgcgcca tggtgccgat tggtacttac gagcgcgtga
     1321 tgcccttgga tatcctgccc accctgcttt tgcgcgattt aatcgtcggc gataccgaca
     1381 gcgcgcaggc attgggttgc ttggaattgg acgaagaaga cctcgctttg tgcagcttcg
     1441 tctgcccggg caaatacgaa tacggcccgc tgttgcgcaa agtgctggaa accattgaga
     1501 aggaaggctg attatgggct tgaaacattt tctggaaaaa atcgaaccgc acttcctgcc
     1561 gggcggcaaa catgaaaaat ggtatgccct ctacgaagcg gcggcgacga ttttctacac
     1621 atccggtgcg gtaacgcgca aagcggcaca cgtccgcgac gcgctcgact ccaagcgcat
     1681 gatgattttg gtgtggctgg ctttgttccc cgccatgttt tacggcatgt acaacgtcgg
     1741 cgcacaggca ttcggtgcct taacgcccga tttgctgcaa caaagcatcg ccaacgactg
     1801 gcattacacc cttgccgacg ctttgggcat caatatgtcg tctgaagcgg gcgtgttggg
     1861 caaaatgctg ttcggcgcga tttacttcct gccgatttac gcgaccgtat ttgccgtcgg
     1921 cggtttctgg gaagtcttgt tcgccaccgt acgcaaacac gaaatcaacg aaggtttctt
     1981 tgttacctcg attctgtttg ccttaatcgt tccgcccacg ctgccgctgt ggcaggcggc
     2041 tttgggtatt tctttcggcg ttgtggttgc gaaagaagta ttcggcggta cgggtaaaaa
     2101 ctttatgaac cctgcgctgg caggccgcgc cttcctgttc ttcgcctacc ccgccaactt
     2161 gagcggcgat gcggtttgga cggcggttga cggctattcc ggcgcaaccg cgctggcgca
     2221 atgggcggca cacggtgcag acggcctgaa aaacgccgta accggtcaaa ccatcacttg
     2281 gatggacgcg tttatcggca aactgcccgg ctccatcggc gaagtctcca ctttggcact
     2341 cttaatcggc ggcgcgttta tcgtgtttgc ccgcatcgct tcttggcgca ttattgccgg
     2401 cgtgatgatc ggtatgattg cgatgtcttc gctgttcaac ttcatcggtt cggacaccaa
     2461 cgctatgttt gccatgcctt ggtactggca tttggtcgtc ggcggcttcg ccatcggtat
     2521 gctgtttatg gcgaccgacc ctgtttccgc ttcctttacc aatgtcggca aatggtggta
     2581 cggcgcgctg atcggcgtga tgtgcgtgtt gatccgcgtg gtcaatccgg cttaccccga
     2641 aggtatgatg ttggcgattc tgtttgccaa cctgtttgcc ccgattttcg actatttcgt
     2701 cgcacaagcg aacatcaaac gcagaaaggc gcgcagcaat ggctaagaaa ttcgataaag
     2761 acagcttcag cggcacgctg attgtcgtgt tggcggtcag cctgatttgc tcggtcatcg
     2821 ttgccggtgc ggtcgtcggc ttgaaaccca tccaagagaa acaaaaactc caagacaaac
     2881 aaggctatat cttgagcgta gccggtttga tggataagga caccgacatc ggcaaaacct
     2941 ttgccgagcg tatcgagcaa cgtgttgtcg atttggcgac cggcgaatac gtcgccgatg
     3001 cgcctaaaga cttcagcgcg cgcatcgcag gcaaagaccc tgcccaaagc atccgcatca
     3061 aacccgaaga cgatttggca ggcatcaaaa gccgtgccaa atacaccgag gtttatttgg
     3121 taaaaggcga agacggcaaa atcgggcaaa tcatcctgcc tatgcacggt aacggtttgt
     3181 ggtcggtcat gtacggcttt gtcgccatcc agcccgacgg caacaccatc aacggcatta
     3241 cctactacga acaaggcgaa accccgggct tgggcggcga aatcggcaat ccgttgtggc
     3301 agcaaaaatt cgtcggcaaa aaactgtttg acggacaagg caaactcgcc ctgcacgtcg
     3361 gcaaaggcgc gggttcggac aaagaacacg gcgtagatgc cctctccggc gcatcgctga
     3421 catccaaagg cgtgcaaggt tcgttcgcct actggttcgg cgaaaacggc tatatcccct
     3481 acctgaacaa attgaaatca gcaggagcgc aataatggct gatatgaaac gcttgaaaca
     3541 tttgatgttt tcacccttta tcgacaacaa cccgattgcc ttgcaggttt tgggtatttg
     3601 ttcggctttg gcggttacca ccaaacttca gacggccatc gtgatgggta tttccgtagc
     3661 tttggtaacc ggtttttcca gcttcttcat ttcgctggta cgcaactaca tccccaacag
     3721 catccgtatt atcgtgcaaa tggcgattat cgcgtcgctg gttacgctgg tcgaccaact
     3781 cttgcaggca tttgcctacg aattgtccaa acagctttcc gtattcgtcg gtctgattat
     3841 taccaactgt atcgtgatgg gccgcgccga agcatttgcg atgaaagagc cgccgctgga
     3901 aagcctgatc gacggcatcg gcaacggcgc gggctacggg ataatgctgc ttgtcgtcgc
     3961 caccgtccgc gaactgattg gctcgggcaa actcttgggc tacaccgttt tccaaaccgt
     4021 gcaggacggc ggctggtatc agaccaacgg cttgttcctg ctcgccccca gcgcgttctt
     4081 catcatcggc tttttgattt ggggactgcg tacctggaaa cccgaacagg cggaggaata
     4141 agctatggaa cactatttga gcctcttcat caaatccgtc ttcattgaaa atatggcact
     4201 atccttcttt ttgggtatgt gcacgttttt ggcggtatcc aaaaaagtat ccaccgcatt
     4261 cggtttgggt gtggcggtaa ttttcgtact cgggctgtcc gtccctgtca accaactcgt
     4321 ttactcgctg ctcaaagacg gcgcgattgt cgaaggcgtg gatttgacct ttttgaaatt
     4381 catcaccttc atcggcgtga ttgccgcttt ggtgcagatt ttggaaatgt tcttggataa
     4441 attcgtcccc gccctctata acgcattggg catctacctg ccgctgatta ccgtgaactg
     4501 cgcgattttc ggcgccgtat cgtttatggc gcaacgcgaa tacaacttcg gcgagtccgt
     4561 tgtatacggc ttcggcgcgg gcttgggctg gatgttggcg attgtcgctt tggcgggcat
     4621 taccgaaaaa atgaaatatt cggacgctcc caaaggcctc aaaggcttgg gcattacctt
     4681 tatcgccgcc ggcctgatgg cgatggcgtt tatgtcgttc tctggcatcc agttataaga
     4741 aagggatcgg tatggagatt attttaggta tcgtgatgtt taccgtcatc gttttggttt
     4801 tggcactgat gattctgttt gccaaatcca aactggtcag cgaaggcgac atcaccatca
     4861 aagtcaacgg cgaaaaagag ctgacgatgc ccgccggcgg caaactcttg ggcgcgcttg
     4921 ccaacgaagg catctttatc ccctccgcct gcggcggggg cggttcgtgc ggacaatgcc
     4981 gcgtcgtcgt aaaaagcggc ggcggcgaca tcctgccgac cgagctgtcc cacatcagca
     5041 aacgcgaagc acgcgaaggc tgccgtctgt cgtgccaagt caacgtcaaa accgacatgg
     5101 acatcgaagt ccccgaagaa gtgttcggcg tgaaaaaatg ggaatgcacc gtcatctcca
     5161 acgataacaa agccacgttc attaaagaac tcaagcttgc cattcccgaa ggcgaagaag
     5221 tccccttccg cgccggcggc tacattcaaa ttgaagcccc gccgcacacc gttgcctaca
     5281 aagacttcga cattcccgag gaataccacg aagactggga caaatacaat ttgtggcaat
     5341 acgtttccaa agtggacgag ccgattttgc gtgcctactc tatggcttcg tatcctgaag
     5401 aaaaaggcat cattatgctg aacgtgcgta tcgccacgcc gcccccgcgc gtacctgatg
     5461 cgcctccggg acaaatgtcg tcctacatct ggtcgctcaa acccggcgac aaagttacga
     5521 tttccggccc gttcggcgaa tttttcgcca aagacaccga tgccgaaatg gtatttatcg
     5581 gcggcggtgc gggtatggct ccgatgcgtt cccacatttt cgaccagttg aaacgtttga
     5641 actccaaacg taagattacc ttctggtacg gcgcacgttc caaacgcgaa atgttctatg
     5701 tcgaagactt cgaccaactc gcagcagaat tcccgaactt cacatggcac gtcgccctgt
     5761 ccgacccatt gcctgaagac aactgggacg gctacacagg cttcattcac aacgtggttt
     5821 acgaaaacca tctgaaaaac cacgaagcgc cggaagactg cgaattttat atgtgtggtc
     5881 ctccgatcat gaaccagtcc gtcatcaaaa tgcttaaaga cttaggcgtg gaagacgaaa
     5941 acatcctctt ggacgatttc ggcggttaaa tattcggctt caaacacaaa aggaagaaac
     6001 ctcggtttct tcctttttct atccgatgcc gcccgaaccc ccttcagacg gcatcggcat
     6061 agaaacatat cggccgtttt gcgatataat tcaaaccatt tgccaaaacc gtcaaacact
     6121 atgccgtctg aaacacgcct gccgaacttt atccgcgtct tgatatttgc cctgggtttc
     6181 atcttcctga acgcctgttc ggaacaaacc gcgcaaaccg ttaccctgca aggcgaaacg
     6241 atgggcacga cctataccgt caaatacctt tcaaataatc gggacaaact cccctcacct
     6301 gccgaaatac aaaagcgcat cgatgacgcg cttaaagaag tcaaccggca gatgtccacc
     6361 tatcagcccg actccgaaat cagccggttc aaccaacaca cagccggcaa gcccctccgc
     6421 atttcaagcg acttcgcaca cgttactgcc gaagccgtcc gcctgaaccg cctgacacac
     6481 ggcgcgctgg acgtaaccgt cggccccttg gtcaaccttt ggggattcgg ccccgacaaa
     6541 tccgttaccc gtgaaccgtc gccggaacaa atcaaacaag cagcatctta tacgggcata
     6601 gacaaaatca ttttgaaaca aggcaaagat tacgcttcct tgagcaaaac ccaccccaag
     6661 gcctatttgg atttatcttc gattgccaaa ggcttcggcg ttgataaagt tgcgggcgaa
     6721 ctggaaaaat acggcattca aaattatctg gtcgaaatcg gcggcgagtt gcacggcaaa
     6781 ggcaaaaacg cgcgcggcga accttggcgc atcggcatcg aacagcccaa catcgtccaa
     6841 ggcggcaata cgcagattat cgtcccgctg aacaaccgtt cgcttgccac ttccggcgat
     6901 taccgtattt tccacgtcga taaaagcggc aaacgcctct cccatatcat taatccgaac
     6961 aacaaacgac ccatcagcca caacctcgcc tccatcagcg tggtcgcaga cagtgcgatg
     7021 acggcggacg gcttgtccac aggattattc gtattgggcg aaaccgaagc cttaaagctg
     7081 gcagagcgcg aaaaactcgc tgttttcctg attgtcaggg atacaggcgg ctaccgcacc
     7141 gccatgtctt ccgaatttga aaaactgctc cgctaaacat acaaaccgat taggaaacac
     7201 catgaaaacc ctgctcctca ccttcggcat cttcctgacc gtcatcatcg gtatggcggt
     7261 cggctatatc ttctccaaac gcaccatcaa aggcagttgc ggcggcatta ccgccttggg
     7321 tatgaaaaaa atgtgcgact gcgacacgcc ttgcgacacc ctgcaaaaga aactggatga
     7381 agaaaaacag gcaggcggca tacgggttga ccgttaacac cgaaacaaaa tgccgtctga
     7441 agcccgacag gcgggttcag acggcattgc cgctttactt cgatcggttt atacgcaaaa
     7501 cgcgcttcag gaaataaatc agattattcc ccagacgcct tcaggcttcc ttctgtgcca
     7561 ccgtaaccat agccgggcgc aacacgcggt cggacagcgt ataacccttc ttcatcacgc
     7621 ccaccacggt attgggttcc tgttcgcttg ccaccgcctg catcgcctga tggatattcg
     7681 gatcgagctt atcgcccgct ttaggattga tttccttgat ttgcgtagca tcaaatgctt
     7741 tctgcaactc gttcaaagtc atctgcacgc ccattttcag cgcatcgaaa ttgccgctct
     7801 gatccaaaag cgccatttcc agataatcct tgaccggcag catttccacg gcaaacttct
     7861 gtccggcgaa cttgtgcgta tccgcaattt cctgctggtg gcggcggcgc aggttttgct
     7921 cgtttgccaa agcgcgcagc tgctcgtctt tcaactgcgc ttccagctcg gcaatccgcg
     7981 cctgcaaatc ctcataagcc ggctctgcgg cagcctgttc ctgcacaccg tccgcatttc
     8041 ctactgtctc gacggtttcc accgcctcca cattttcaac cgcttcttca ctgttttgct
     8101 gctgtgtctg ttcgctcata tcgtatccct taaaacaaat tggaaatcaa aatccagtta
     8161 ttacccgcgc aagataagga cattttcaag aaacttcaag caaaagcaga gaatttcaaa
     8221 ttcattttca aatcccctac cgaaaaaata atatagacgg taagatactg ccgaccatat
     8281 cgattttcaa acgtcatcac tcatgaaaaa agaccattta aacacaaccg gtttcgacct
     8341 ctggcacacc atccgcgaag aaaccgcggc cgcggtctcc gccgaaccga tgctggcaag
     8401 ttttttgcac caaaccgtgt tgcgccacga gtccctcggc tccgtccttg cctaccacct
     8461 ttccagcaaa ctcggcagcc cgattatgga cgtgcgcgcg ctgtttgaaa tctaccagca
     8521 ggcgttgggc agcgacaccc aaatcggcaa atgcgtcgaa gcagacttaa aagccatcta
     8581 cgaacgcgat cccgcctgcg acgaatattc gctgccgctt ttatatttca aaggcttcca
     8641 cgcgattcag gcacaccgca tcaaccatcg gctgtatctc gacgggcgca aaacgctggc
     8701 gtatttcctg caaaaccgta tgtccgaagt attcggcgtg gacatccatc ccgccgcccg
     8761 tttcggatac gggctgatgc tcgaccacgc caccggcttt gttgccggcg aaaccgccgt
     8821 gttgggcaac aatatttcga ttttgcacgg cgtaacgctc ggcggttcgg gcaaagaagg
     8881 cggcgaccgc caccctaaaa tcggcgacgg cgtgatgatc ggcgcaaacg cctcgatatt
     8941 gggcaatatc cgcatcggca gcaatgccaa aatcggggcg ggcagcgtcg tggtttcaga
     9001 cgtgccgccg tccatcacgg ttgtcggcgt acccgccaaa cccgtggcgc gatcgctcaa
     9061 aacaccgtcg gcggatatgg atcaaaatat ccagtttacc gaaatcgact ttatgatttg
     9121 aatatccgca ccaatgccgt ctgaaacgcc aaacgggctt cagacgacat tgcccgcttc
     9181 aagcctgcgc cttgatatgc cgccgatgtc ggcacttgcc agtcggacaa aatgcctttt
     9241 attcaataca cccgattccc acgcaaccgg aaatatagtg gattaacaaa aatcaggaca
     9301 aggcgacgaa gccgcagaca gtacg
//
LOCUS       DAWGKF010000075         9169 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.075, whole genome shotgun sequence.
ACCESSION   DAWGKF010000075 DAWGKF010000000
VERSION     DAWGKF010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9169)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9169)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9169
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.075"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..275
                     /locus_tag="WHR07_001235"
     CDS             <1..275
                     /locus_tag="WHR07_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase"
                     /protein_id="HEZ2130450.1"
                     /translation="DLNQMYLEDGSLSVQILGRGFAWLDTGTHESLHEAASFVQTVQN
                     IQNLHIACLEEIAWRNGWLTKKDVETRAKPLEKTAYGQYLLRLIGK"
     gene            320..859
                     /gene="rfbC"
                     /locus_tag="WHR07_001236"
     CDS             320..859
                     /gene="rfbC"
                     /locus_tag="WHR07_001236"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HEZ2130451.1"
                     /translation="MNIIDTALPDVKLLKPQVFKDGRGFFMETFRDEWFKTQVCERTF
                     VQENHSKSGKGVLRGLHYQTENTQGKLVRVVVGEVFDVAIDMREGSPTFGKWAGATLS
                     AQNQCQLWIPEGFAHGFYVLSDTTELTYKCTDYYKPEAEQVLIWNDPTVGIGWPLQTA
                     PNLSPKDLAGKVLAEAVTF"
     gene            883..2985
                     /locus_tag="WHR07_001237"
     CDS             883..2985
                     /locus_tag="WHR07_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HEZ2130452.1"
                     /translation="MFLFSDGLQSINNNNRRKRIVKNAYIPSRGIRKIPHLFTLLPEF
                     HICKDGKGAEAVIGWGLRPTTHKARAFAAEHQLPFIALEDGFLRSLGLGVAGYPPYSI
                     VYDDIGIYYDTTRPSRLEQLILAANMPSEMLNQAQQAIDLILTHRLSKYNHALDFSDG
                     LVQDSKNIVLVIDQTFGDMAIQYGGADEATFRQMFQTALAENPDAEIWVKTHPDVLSG
                     KKQGYLTDLAQQPRVRLLAEDINPISLLQNIDKVYCVTSQMGFEALLCGKPLTTFGLP
                     WYAGWGVSDDRHPKIDSLVQTQRRAPRNLLQLFAAAYLQYSRYLNPNTGEAGSLFDVI
                     DYLATVKRKNDKLRGELYCVGMSLWKRAVAKPFFNVPSCRLKFISSTQKLARVKLSDD
                     ARILAWGNGKEAIVRFAEQHHIPLLRMEDGFIRSVGLGSNLVPPLSLVTDDMGIYFNA
                     EAPSRLEHILQNQNFDDQDFQTALKLQKMLTENHISKYNVGNSDFTAPSTDKTVILVP
                     GQVEDDASIRYGSPQIYHNLDLLRTVRERHPDAYIIYKPHPDVVSGNRIGHISPEDAA
                     RYADQTAEQADILTCLQYADEIHTMTSLTGFEALLRGKKVSCYGLPFYAGWGLTQDLL
                     PIPRRSRRLELWQLIAGTLIHYPDYIHPETHQAINAETAAQILIRQKNMQKNNNGLHR
                     GCFAKKLGKIKQLYRSFK"
     gene            3122..4381
                     /locus_tag="WHR07_001238"
     CDS             3122..4381
                     /locus_tag="WHR07_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HEZ2130453.1"
                     /translation="MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLADWLTANGKT
                     VHKFNFNAGDDYFYPPTQAHTVVFNDNYDAFPEFLQEYITQHHIQAVVCFGDTRPYHV
                     IAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLAQQEY
                     KAPTPVHGGFTPMAKNAIRYYIELFRNPRKYPDYIHHRAPNAGHYLKPWSLFILKRLN
                     YYIEDIQIAKRVEAGKYGKFFIVPLQVFNDSQVRIHCDFSSVRSFLLHVLSSFAEHAP
                     ADTNIIIKHHPMDRGFIDYWRDIKRFIKEHPELKGRVIYVHDVPLPVFLRHGLGMVTI
                     NSTSGLSGLIHNMPVKVLGRAYYDIPGITDQNTLAEFWNHPTPPDKELFHAYRMYHLN
                     VTQINGNFYSQVFFPNKKTSNSSTPVI"
     gene            4749..6155
                     /locus_tag="WHR07_001239"
     CDS             4749..6155
                     /locus_tag="WHR07_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HEZ2130454.1"
                     /translation="MTAAPDILYRQAAALLEQSNTAQALPLLQQAAEQGYAEAAFVLG
                     NHLLQNGQPEQALSWLEAAAAQRHPKALFSLLQQREHNGTPTGQLLNDYAWLGEQGHS
                     EAQLILMRYHAQRNDPQSLYWAELAAARYAAPAYYHLARHHQRQGDVETAIEQYEKAA
                     ALGVTAACWQLGQIYFYGTGVSLNHAQAEHYLEPAAQAGHIAAQTLLADLLAAQRKPE
                     ALEWYRRAADKEQAEAQSKLAQYALTGELSERDPFQAARYAKAAAEKNHPEALKIMGD
                     LYRYGLGIKADNHIAQDYYHRAAALGSAAAAQKLISDAALYHPQQYEQIKTAALQQQQ
                     TETIYRLAEAQACAIGRPADYNAARKNYMEAAGFHHKNAAAALGRIYHYGLGTAQDPR
                     AAAHWYAIAAEQNHPSAQYHLACFYYHGQGIGCHVPTACYWLQAAISNGHTSAESLIS
                     LLEQWRREAHHAIGQKAV"
     gene            6373..7587
                     /gene="gltS"
                     /locus_tag="WHR07_001240"
     CDS             6373..7587
                     /gene="gltS"
                     /locus_tag="WHR07_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HEZ2130455.1"
                     /translation="MEWEFNSYYTLIAATLVLLVGKFLVQKIKFLRDFNIPEPVAGGL
                     VAAIILFALHEAYGVSFKFEKPLQNAFMLIFFTSIGLSADFSRLKAGGLPLVVFTAIV
                     GGFILVQNFVGVGLATALGLDPLIGLITGSVSLTGGHGTSGAWGPNFETQYGLVGATG
                     LGIASATFGLVFGGLIGGPVARRLINKMGRKPVENKKQDQDDNADDVFEQAKRTRLIT
                     AESAVETLAMFAACLAFAEIMDGFDKEYLFDLPKFVWCLFGGVVIRNILTAAFKVNMF
                     DRAIDVFGNASLSLFLAMALLNLKLWELTGLAGPVTVILAVQTVVMVLYATFVTYIFM
                     GRDYDAAVLAAGHCGFGLGATPTAVANMQSVTHTFGASHKAFLIVPMVGAFFVDLINA
                     AILTGFVNFFKG"
     gene            7686..8702
                     /locus_tag="WHR07_001241"
     CDS             7686..8702
                     /locus_tag="WHR07_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HEZ2130456.1"
                     /translation="MYRKLIALPFALLLAACGREEPPKALECANPAVLQGIRGNIQET
                     LTQEARSFAREDGRQFVDADKIIAAAYGLAFSLEHASETQEGGRTFCIADLNITVPSE
                     TLADAKANSPLLYGETALSDIVRQKTGGNVEFKDGVLTAAVRFLPVKDGQTAFVDNTV
                     GMAAQTLSVALLPYGVKSIVMIDGKAVKKEDAVRILSGKAREEEPSKPTPEDILEHNA
                     AGGDADVPQAAEGAPEPEILHPDDGERADTVTVSRGEVEEARVQNQRAESEITKLWGG
                     LDTDVQKELVGEQRKWAQEKISNCRQAAAQADRQEYAEYLKLQCDTRMTRERIQYLRG
                     YSID"
     gene            8713..8910
                     /locus_tag="WHR07_001242"
     CDS             8713..8910
                     /locus_tag="WHR07_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130457.1"
                     /translation="MNTVPKSRIPVKPLPEKTTDEAKVEKWRQLGAEHGLSGEWAVAV
                     RLGENGFTEEQMENIANLFGR"
     gene            8928..9077
                     /locus_tag="WHR07_001243"
     CDS             8928..9077
                     /locus_tag="WHR07_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130458.1"
                     /translation="MPSETLLSVSDGILTNTVRRRKTAGFSCVAYADVSTRRTIYKAL
                     PYVPS"
BASE COUNT         2372 a         2620 c         2140 g         2037 t
ORIGIN      
        1 ccgacctcaa ccaaatgtat ttggaagacg gttcattgtc cgtccaaata ttaggacgcg
       61 gtttcgcatg gttggacacc ggcacccacg agagcctgca cgaagccgct tcattcgtcc
      121 aaaccgtgca aaacatccaa aacctgcaca tcgcctgcct ggaagaaatc gcttggcgca
      181 acggttggct gacgaaaaaa gatgtggaaa cacgggcaaa gcctttggaa aaaaccgcct
      241 acgggcaata cctgctgcgc ctgatcggca aataaatgcc gtctgaacca ctttcttcag
      301 acggcataca gagaaaatca tgaacatcat cgacaccgcc ctccccgacg taaaactttt
      361 aaaaccgcaa gtcttcaaag acgggcgcgg cttttttatg gaaaccttcc gcgacgagtg
      421 gtttaaaacc caagtctgcg aacgcacctt cgtgcaggaa aaccactcca aatccggcaa
      481 aggcgtattg cgcggcctgc actaccaaac cgaaaacaca caaggcaaac tcgtacgcgt
      541 agttgtcggc gaagtgttcg acgtggccat cgatatgcgc gaaggttcgc cgactttcgg
      601 caaatgggcg ggcgcaaccc tgtccgcgca aaaccaatgc cagctttgga tacccgaagg
      661 cttcgcgcac gggttttacg ttttgagcga cacgaccgaa cttacctaca aatgcacgga
      721 ctattacaag cctgaagccg aacaggtttt aatatggaac gacccgacag tcggcatagg
      781 ctggccgctt caaaccgcgc cgaacctgtc gcctaaagac ttggcaggca aagtattggc
      841 cgaagcagtc acgttttaag actattcagg ccgtctgaaa gaatgttcct cttttcagac
      901 ggcctacaat ccattaataa caataatcga cgaaaacgca ttgtgaaaaa cgcctacatc
      961 ccctctcgtg gcatccgcaa aatcccccat ctcttcaccc tattgcctga gtttcatatc
     1021 tgcaaggatg ggaaaggagc agaggctgtt atcggctggg gtttgcgccc gacgacacac
     1081 aaagcgcgtg cttttgccgc tgaacaccag cttcccttta ttgctttgga agacggcttt
     1141 ttacgctcgc ttggcctggg cgttgccggc tatcctccct attccatcgt ctatgacgac
     1201 atcggcatct attacgacac aacccgccca tcgcgtttgg agcagttgat tttagccgca
     1261 aacatgccgt ctgaaatgct taaccaagcg cagcaggcca ttgatttgat tttgacgcac
     1321 cgtttgtcta aatataacca tgctctggat ttttcagacg gcctcgtaca agacagcaaa
     1381 aacattgttt tggtaattga tcaaactttc ggcgatatgg cgattcaata tggcggcgca
     1441 gatgaagcca cattccgcca aatgtttcag acggccttag ccgaaaatcc tgatgcggaa
     1501 atctgggtca aaacccatcc cgatgtattg agcggcaaga aacagggtta ccttactgat
     1561 ttggcacagc agccgcgtgt gcgtttattg gctgaagaca tcaatccgat ttctttgttg
     1621 caaaacatcg ataaagttta ttgcgttacc tcgcaaatgg gttttgaggc gcttttgtgc
     1681 ggcaagccgc tgaccacttt cggcctgccg tggtatgccg gatggggcgt gagtgacgac
     1741 cgccatccta aaatcgacag ccttgttcaa acccaacgcc gcgccccccg caacttgctg
     1801 cagctcttcg ctgcagccta tctgcaatac agccgctacc tcaaccccaa taccggcgaa
     1861 gcaggcagcc tctttgatgt catcgactat ctggcgacgg tcaaacgcaa aaacgacaaa
     1921 ttgcgtggcg agttatattg cgtcggtatg tctttgtgga aacgcgcggt tgccaaaccg
     1981 ttctttaacg taccctcttg ccgtctgaaa tttatctctt ccacccaaaa actggcaagg
     2041 gtcaaactgt ccgacgatgc acgcatcctg gcttggggca acggcaaaga ggccatcgtc
     2101 cgctttgccg aacaacacca catccccctg ctgcgcatgg aagacggctt tatccgctcg
     2161 gtcggactcg gctccaactt agtgccgccg ctgtcgctcg ttaccgacga tatgggtatt
     2221 tacttcaatg ccgaagcccc atcccgcctt gaacacatcc tgcaaaacca aaacttcgac
     2281 gatcaagact ttcagacggc cttgaagttg caaaaaatgc tgaccgaaaa ccatatcagc
     2341 aaatacaacg tcggcaactc agactttacc gccccatcaa ccgacaaaac cgtgatcctc
     2401 gttcccggtc aggttgagga tgatgcgtct atccgctatg gttcgcccca aatctatcac
     2461 aatctggatt tgctccgtac cgtacgcgaa cgccatcccg atgcctatat catctacaaa
     2521 ccgcatcccg atgtagtcag cggtaaccgc atcggccata tttcccctga agatgctgca
     2581 cgatatgccg accaaaccgc cgaacaagcc gacatcctga cctgtctcca atacgcagac
     2641 gaaatacata ccatgacttc gctgaccggt tttgaagcct tgttgcgcgg caaaaaagtc
     2701 agctgctacg gcctgccttt ttacgcaggc tgggggctta cccaagatct gctccccatc
     2761 ccgcgccgta gccgcagact tgagctttgg cagctgattg ccggcacgct catccactat
     2821 cccgactaca tccaccccga aacccatcag gccataaatg cagaaaccgc agcccaaatc
     2881 ctgatacgac aaaaaaatat gcaaaaaaac aacaacggat tacatcgcgg gtgctttgcc
     2941 aaaaaattag gtaaaatcaa acaactatat cgatctttca aataaatacc atcaaagtta
     3001 acgatgcgtc ataaacttgc ctctattgcg gcatcattgc ctttgcatcg ttaattctct
     3061 tggcgtatgc ttgaaagttc aacctaaaac tattacataa aaaacaaaac cacattgcaa
     3121 catgaaacag accgtcctca aaaataacct gcaaaacctg cttgaaagcg cagaaaatat
     3181 cctgctgctt caaggccctg tcggcgattt ttttctgcgc cttgccgact ggctgactgc
     3241 aaacggcaaa accgtacata aattcaactt taatgcaggc gacgactatt tttatccgcc
     3301 cactcaagcg cataccgttg tttttaacga caactacgat gcctttcctg agtttttgca
     3361 agaatacatc actcaacatc acatccaggc cgttgtctgc tttggcgaca cacgccctta
     3421 tcacgtcatt gcaaaacgca ttgcaaacga aaaccaagcc agtttctggg cgtttgaaga
     3481 aggctatttc cgcccctact acatcacctt agaaaaagac ggcgtcaacg cattttcccc
     3541 gttgccgcgc cgtgccgact tttttcttga acaattccct aagcttgccc agcaagaata
     3601 taaagcgcca acgccggtac acggcggttt tacgcccatg gcaaaaaacg ctatccgtta
     3661 ctatatcgag ttgttccgca atccacgcaa ataccccgac tacatccacc accgcgcacc
     3721 caatgccggc cattacctca aaccgtggtc gctcttcatc ctcaagcgtt tgaactacta
     3781 tattgaagac atccaaatcg ccaaacgtgt ggaagcaggc aaatacggca agttttttat
     3841 tgttccctta caggtattca acgacagcca agtccgtatc cattgcgact tttccagcgt
     3901 ccgcagcttc ctgctccatg ttttgagttc atttgccgag cacgcgcctg ccgataccaa
     3961 catcatcatc aagcatcatc cgatggaccg cggttttatc gactactggc gcgacattaa
     4021 acgctttatc aaagaacacc ccgaactcaa aggccgcgtg atttatgtcc atgatgtccc
     4081 cctgcccgtt ttcctgcgcc acggtctcgg catggtcacc atcaacagca ccagcggcct
     4141 gtccggcctg attcacaata tgccagttaa ggttctcggc cgtgcctatt atgatattcc
     4201 cggcattact gaccaaaata ccttggcaga attttggaat catccgacac cgcctgacaa
     4261 agagctgttc catgcctacc gaatgtacca cctcaacgtg acccaaatta acggcaactt
     4321 ctacagtcag gtgtttttcc ccaacaaaaa aacctccaac tcttccacac cagtaatctg
     4381 acttagcgaa ggaaagttca ggccgtctga aaacatttca gacggcctga aacaatcaat
     4441 accttagcta ctgccatgta aataaaacac aaaaatctgc atttatcatt aacaataaat
     4501 tacaaaaaca gtataatgac cgagctgcca tgagcgcata ccgactcaac ctgagccctt
     4561 tgtaacacac aaaatatgga tatatcccta ggcaaaacaa tataacaagc caaacatcct
     4621 aaagataagc cggcaaggca atacactcta taaaactgtg ccgagcaaaa tttttacaaa
     4681 gccctcaacc ggtatcgccg cccatatgcc gcagcatccg tcttccactt tatatccgcc
     4741 cgcaaaccat gaccgccgct cctgatatcc tctaccggca agccgccgcc cttttggaac
     4801 aatccaatac cgcccaagcc ctgcccctgt tgcaacaggc ggcagagcaa ggttatgcgg
     4861 aagctgcttt cgtattgggc aaccatctgc tgcaaaacgg ccaaccggag caggcacttt
     4921 catggttgga agccgccgcg gcccaacgcc atcccaaagc actcttctcc ctgctgcaac
     4981 aacgcgaaca caacggcacc ccgaccggac agcttctcaa cgactatgcc tggctgggtg
     5041 agcaggggca ctcagaagcc caattaatcc tcatgcgtta ccacgcgcaa cgcaacgatc
     5101 cacaatcgct ctactgggcg gaacttgctg ccgcccgata tgccgcacct gcgtattacc
     5161 atctggcacg ccatcatcaa cgccaaggcg acgttgaaac agccatcgaa caatacgaaa
     5221 aagcggcagc actcggcgta actgccgcct gctggcaact tggtcaaatc tacttctacg
     5281 gtacaggtgt cagcctcaac cacgcacaag ccgaacacta tctcgaacca gccgcacaag
     5341 ccggccacat cgccgcacaa acgctgctgg ctgaccttct tgccgcccaa cgcaaacctg
     5401 aagccttgga atggtatcgt cgtgccgccg ataaggaaca agcggaagca cagtctaagc
     5461 tggcccaata cgccctgacc ggcgaacttt ccgaacgcga tccgttccaa gcggcacgat
     5521 atgccaaagc cgctgccgag aaaaaccatc ctgaagccct gaaaatcatg ggcgacctct
     5581 accgctacgg tctcggtatc aaagccgaca accatatcgc gcaagattac taccaccgtg
     5641 ccgccgcgct gggttctgcc gccgcagcac aaaaactcat cagcgacgcc gcgctgtacc
     5701 atccgcaaca atacgaacaa atcaaaactg ccgccctgca acaacaacaa accgaaacca
     5761 tctaccgttt ggcggaagca caagcctgcg ccatcggccg tcccgccgac tacaatgccg
     5821 cgcgaaaaaa ttacatggaa gctgccgggt tccaccataa aaacgcagcg gcagccttag
     5881 gccgcatcta ccattacggc ctcggtacgg cgcaagatcc tcgggcggct gcacactggt
     5941 acgccattgc tgccgaacaa aaccaccctt ccgcccaata ccacctcgcc tgtttttact
     6001 atcacggaca aggtatcggc tgtcatgttc cgaccgcctg ctactggctg caggccgcca
     6061 tcagcaacgg ccacacttcg gccgaatcat taatatccct attagaacaa tggcgacgcg
     6121 aagcacacca tgccatcgga caaaaggccg tctgaaaaga tttacactcg cattttttga
     6181 caatctttaa ctattcccct aatatttgcc agttattttt cacggacacg ccattgtttt
     6241 catttctttc tgaaaacacc ttgtccgcgc atcaatacca tgacactcgg cggataacgc
     6301 caagcgttga aacacactac atccggaaca aaaacggatg ctcggaaaaa tatttctagg
     6361 aggtgaaaca acatggaatg ggaattcaac agttattaca cactgattgc cgccacgctc
     6421 gtgttgctgg ttggtaaatt tctggttcaa aaaatcaaat tcttacgaga cttcaatatt
     6481 cccgagccgg tcgctggcgg tttggttgcc gcgattatcc tgtttgcgct gcacgaggcg
     6541 tacggcgtga gcttcaaatt tgagaaaccg ctgcaaaatg cgtttatgct gatttttttc
     6601 acgtccatcg gcttgagcgc agatttttcc cgtttgaagg cgggcggttt gccgctggtg
     6661 gtttttaccg cgattgtggg cggatttatc ttggtgcaaa actttgtcgg ggtcggactg
     6721 gctacggctt tgggtttgga tccgctcatc ggtctgatta ccggttcggt gtcgctgacg
     6781 ggcggacatg gtacgtcagg tgcgtgggga cctaattttg aaacgcaata cggcttggtc
     6841 ggcgcaaccg gtttgggtat tgcatcggct actttcgggc tggtgttcgg cggcctgatc
     6901 ggcgggccgg ttgcgcgccg cctgatcaac aaaatgggcc gcaaaccggt tgaaaacaaa
     6961 aaacaggatc aggacgacaa cgcggacgac gtgttcgagc aggcaaaacg cacccgcctg
     7021 attacggcgg aatctgccgt tgaaacgctt gccatgtttg ccgcgtgttt ggcgtttgcc
     7081 gagattatgg acggcttcga caaagaatat ctgttcgacc tgcccaaatt cgtgtggtgt
     7141 ctgtttggcg gcgtggtcat ccgcaacatc ctcactgccg cattcaaggt caatatgttc
     7201 gaccgcgcca tcgatgtgtt cggcaatgct tcgctttcgc ttttcttggc aatggcgttg
     7261 ctgaatttga aactgtggga gctgaccggt ttggcggggc ctgtaaccgt catccttgcc
     7321 gtacaaaccg tggtgatggt tttgtacgcg acttttgtta cctatatctt tatggggcgc
     7381 gactatgatg cggcagtatt ggctgccggc cattgcggtt tcggcttggg tgcaacgccg
     7441 acggcggtgg caaatatgca gtccgtcacg catactttcg gcgcgtcgca taaggcgttt
     7501 ttgattgtgc ctatggtcgg cgcgttcttc gtcgatttga ttaatgccgc gattctcacc
     7561 ggttttgtga atttctttaa aggctgattt tccgcctttc cgacaaagca cctgcaaggt
     7621 ttaccgcctg caggtgcttt tgctatgata gccgctatcg gtctgcaccg tttggaagga
     7681 acatcatgta tcggaaactc attgcgctgc cgtttgccct gctgcttgcc gcttgcggca
     7741 gggaagaacc gcccaaggca ttggaatgcg ccaaccccgc cgtgttgcaa ggcatacgcg
     7801 gcaatattca ggaaacgctc acgcaggaag cgcgttcttt cgcgcgcgaa gacggcaggc
     7861 agtttgtcga tgccgacaaa attatcgccg ccgcctacgg tttggcgttt tctttggaac
     7921 acgcttcgga aacgcaggaa ggcgggcgca cgttctgtat cgccgatttg aacattaccg
     7981 tgccgtctga aacgcttgcc gatgccaagg caaacagccc cctgctgtac ggggaaaccg
     8041 ctttgtcgga tattgtgcgg cagaagacgg gcggcaatgt cgagtttaaa gacggcgtat
     8101 tgacggcagc cgtccgcttc ctgcccgtca aagacggtca gacggcattt gtcgacaaca
     8161 cggtcggtat ggcggcgcaa acgctgtctg tcgcgttgct gccttacggc gtgaagagca
     8221 tcgtgatgat agacggcaag gcggtaaaaa aagaagacgc ggtcaggatt ttgagcggaa
     8281 aagcccgtga agaagaaccg tccaaaccca cgcccgaaga cattttggaa cataatgccg
     8341 ccggagggga tgcagacgta ccccaagccg cagaaggcgc gcccgaaccg gaaatcctgc
     8401 atcctgacga cggcgagcgt gccgataccg ttaccgtatc acggggagaa gtggaagagg
     8461 cgcgcgtaca aaaccagcgt gcggaatccg aaattaccaa actttgggga ggactcgata
     8521 ccgacgtgca aaaagagttg gtcggcgaac aacgcaagtg ggcgcaggaa aaaatcagca
     8581 actgccgaca agccgccgcg caggcagacc ggcaggaata cgccgaatac ctcaaattgc
     8641 agtgcgacac gcggatgacg cgcgaacgga tacagtatct tcgcggctat tccatcgatt
     8701 aggggcaaac cgatgaatac cgtcccaaaa agcaggattc ccgtcaaacc gctgcccgaa
     8761 aaaaccacag acgaagccaa agtcgaaaaa tggcggcagc tcggtgcgga acacggtttg
     8821 tcgggcgaat gggcagttgc cgtcagattg ggcgaaaacg gttttaccga agaacagatg
     8881 gaaaatatcg ccaacctgtt cggcagataa agagaaaatt gacggaaatg ccgtctgaaa
     8941 ccctgttatc ggtttcagac ggcattttga ccaatacggt acgcaggcgc aaaacagccg
     9001 gcttttcctg tgttgcctat gctgatgttt caacacgcag gacgatatat aaagcgttgc
     9061 cctatgtgcc gtcctgattc ggaaagggtt acgcccctcc taaatatagt ggattaacaa
     9121 aaaccagtac ggcgttgcct cgccttagct caaagagaac gattcttta
//
LOCUS       DAWGKF010000076         9089 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.076, whole genome shotgun sequence.
ACCESSION   DAWGKF010000076 DAWGKF010000000
VERSION     DAWGKF010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9089)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9089)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9089
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.076"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..201)
                     /locus_tag="WHR07_001244"
     CDS             complement(<1..201)
                     /locus_tag="WHR07_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEZ2130459.1"
                     /translation="MNILLLDGGKAFGHSHGGLNRTLHKKAKEVLTALGHNVQETVID
                     AGYDVEAEIEKFVWMDAVIWQMP"
     gene            440..1339
                     /gene="crgA"
                     /locus_tag="WHR07_001245"
     CDS             440..1339
                     /gene="crgA"
                     /locus_tag="WHR07_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_151940473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator CrgA"
                     /protein_id="HEZ2130460.1"
                     /translation="MKTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEK
                     LGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLRVDSAMP
                     MVLHLLAPLATKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLF
                     DSRFRVIASPEYLAKHGTPQSTEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKISPHF
                     TASSGEILRSLCLSGCGIACLSDFLVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDK
                     AVNLRLRVFLDFLVEELGNNLCG"
     gene            complement(1566..4781)
                     /gene="carB"
                     /locus_tag="WHR07_001246"
     CDS             complement(1566..4781)
                     /gene="carB"
                     /locus_tag="WHR07_001246"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEZ2130461.1"
                     /translation="MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKV
                     ILVNSNPATIMTDPEMADVTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDL
                     ARNGVLAKYNVELIGATEDAIDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQE
                     QVGFPTLIRPSFTMGGSGGGIAYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEM
                     EVVRDKNDNCIIICSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIG
                     VDTGGSNVQFAVNPENGEMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGFKLDE
                     LRNDITGGKTPASFEPSIDYVVTKIPRFAFEKFPAADDRLTTQMKSVGEVMAMGRTIQ
                     ESFQKALRGLETGLCGFNPRSSDKAEIRRELANPGPERMLFVADAFRAGFTLEEIHEI
                     CAIDPWFLAQIEDLMKEEKAVSDGILSDLDFAALRRLKRKGFSDKRLAQLLNVSEKEV
                     REHRYALKLHPVYKRVDTCAAEFATETAYLYSTYEEECESRPSDRKKVMILGGGPNRI
                     GQGIEFDYCCVHAALALRESGFETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIV
                     RTENPWGVIVHYGGQTPLKLANALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLR
                     QPPNRIAHNEEEALVKAEEIGYPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSE
                     DSPVLLDFFLNNAIEVDVDCVSDGKDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEE
                     IQDEIRRQTKAMAYALGVVGLMNVQFAVQDGVVFVLEVNPRASRTVPFVSKATGVPLA
                     KVGARCMAGISLKEQGVEKEVVPDFYAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGV
                     GASFGEAYYKAQLGAGERLNPTGKIFLSVREEDKERVIKTAKNFQVLGYGICATRGTA
                     QYLTEQGLIVQTINKVPEGRPHIGDALKNGEIALVVNTVSSDPQSVSDSHIIRQSALQ
                     QRVPQYTTTAGGEAMSEGAKSRDHLGVYSVQELHGRLKNRN"
     gene            complement(4788..5336)
                     /locus_tag="WHR07_001247"
     CDS             complement(4788..5336)
                     /locus_tag="WHR07_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130462.1"
                     /translation="MRTIFFSGSRSISRLNPQIRERINNILSNNFDIVIGDANGADKA
                     IQKFLQEQDYANVHIYFSGKIYRNNVGNWQFVQVDSKGTGRVFYTAKDKKMAEIADYG
                     FILWDGKSIGSLNNIAELLQLNKPSLVYHSQTKEFFKIKSSADLENILSNIEDDVLAS
                     ILEKGNTFLKSYVTKQPSLIQE"
     gene            complement(5339..5902)
                     /locus_tag="WHR07_001248"
     CDS             complement(5339..5902)
                     /locus_tag="WHR07_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HEZ2130463.1"
                     /translation="MAIELNGNWTKGFALDHHMQKSILLGYDELGHPHFDSKRSVIGE
                     WVYQLKYRNQTQNVSLLVDYILQKFSGLESINLIVPAPFTTERINQPVQLIAKELSDR
                     LNIPYSPILRKSSSHTPLKNIEEKSEKLEILNNSITIDNIDLSNKNILVIDDLFDSGA
                     TLEISTEKLFSKNARSVIVLAMTKTRG"
     gene            complement(6309..6476)
                     /locus_tag="WHR07_001249"
     CDS             complement(6309..6476)
                     /locus_tag="WHR07_001249"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130464.1"
                     /translation="MADFDWIIENNRIKPTELSIYKGRLKNKKQPAQPVFPAEPLIPT
                     AAPSSLPVGKR"
     gene            complement(6480..6869)
                     /locus_tag="WHR07_001250"
     CDS             complement(6480..6869)
                     /locus_tag="WHR07_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HEZ2130465.1"
                     /translation="MSTHEKLLTADNPVLHQRAKAMRQEMSEAEAKLWQHLRAGRLNG
                     YKFRRQQPMGNYIVDFMCVTPKLIVEADGGQHTEQAAYDHARTAYLNSLGFTVLRFWN
                     HEILQQTNDVLTEILLVLQELEKQAAR"
     gene            complement(7461..7586)
                     /locus_tag="WHR07_001251"
                     /pseudo
     CDS             complement(7461..7586)
                     /locus_tag="WHR07_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687282.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
     gene            complement(7632..8765)
                     /gene="carA"
                     /locus_tag="WHR07_001252"
     CDS             complement(7632..8765)
                     /gene="carA"
                     /locus_tag="WHR07_001252"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HEZ2130466.1"
                     /translation="MSTPALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILT
                     DPSYCKQIVTLTYPHIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYL
                     VRNKTVAIADIDTRRLTTLLREKGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAK
                     EVSCTETYEWTEGEWELGKGFVTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPA
                     QTSAQDVLALNPDGVFLSNGPGDPEPCTYAIEAVQKLMESGKPIFGICLGHQLISLAI
                     GAKTLKMRFSHHGANHPVQDLDSGKVVITSQNHGFAVDADTLPANARITHKSLFDNTL
                     QGIELTDKPVFCFQGHPEASPGPQDVGYLFDKFIGNMKAAKRA"
BASE COUNT         2074 a         2275 c         2327 g         2413 t
ORIGIN      
        1 cggcatctgc caaatcacgg catccatcca aacgaatttt tcgatttctg cctcaacatc
       61 atagccggca tcaatcacgg tttcttgaac attgtgtccg agcgcggtca aaacttcttt
      121 cgcttttttg tgaagcgtgc ggtttaaccc gccgtgagaa tgtccgaacg ccttgccgcc
      181 gtctaataat aaaatattca tttgttacct cgtttgtgaa ttgatgaatg tattgtgccg
      241 ttttacttta taatttaaaa gtgcaaaaat aagaaaacac ttttgcgtca aatgaaataa
      301 tcagatgttt caacacacgg gatgacacat aaagcgtctc cctatgtgcc gtcctgattc
      361 ggaaggggtt acacccctcc caaataaagt ctgatcctgc cgccctaaag ggcggggttc
      421 caatcgaaaa ggaaacacga tgaaaaccaa ttcagaagaa ctgaccgtat ttgttcaagt
      481 ggtggaaagc ggcagcttca gccgtgcggc ggagcagttg gcgatggcaa attctgccgt
      541 aagccgcatc gtcaaacggc tggaggaaaa gttgggtgtg aacctgctca accgcaccac
      601 gcggcaactc agtctgacgg aagaaggcgc gcaatatttc cgccgcgcgc agagaatcct
      661 gcaagaaatg gcagcggcgg aaaccgaaat gctggcagtg cacgaaatac cgcaaggcgt
      721 gttgcgcgtg gattccgcga tgccgatggt gctgcatctg ctggcgccgc tggcaacaaa
      781 attcaacgaa cgctatccgc atatccgact ttcgctcgtt tcttccgaag gctatatcaa
      841 tctgattgaa cgcaaagtcg atattgcctt acgggccgga gaattggacg attccgggct
      901 gcgtgcacgc catctgtttg acagccgctt ccgcgtaatc gccagtcctg aatacctggc
      961 aaaacacggc acgccgcaat ctacagaaga gcttgccggt caccaatgtt taggcttcac
     1021 cgaacccggt tctctaaata catgggcggt tttagatgcg cagggaaatc cctataagat
     1081 ttcaccgcac tttaccgcca gcagcggtga aatcttacgc tcgttgtgcc tttcaggttg
     1141 cggtattgct tgcttatcag attttttggt tgacaacgac atcgctgaag gaaagttaat
     1201 tcccctgctc gccgaacaaa cctccgataa aacacacccc tttaatgctg tttattacag
     1261 cgataaagcc gtcaacctcc gcttgcgcgt atttttggat tttttagtgg aggaactggg
     1321 aaacaatctc tgtggataat tctataaaaa cctgccataa aattgttttt actcacttaa
     1381 taactttgag aaaaaataaa taagatgatg tatagccggc ggcaatggca gtctatatgg
     1441 ggagcgtgat agggctgttc cttatgtacg gcttgtgtgt ggcaacatcg gctttccaaa
     1501 tgacaaaatg ccgtctgaca ccgtaaaaaa aggtttcaga cggcattttc aacctgattc
     1561 aggcatcagt tgcggttttt caaacgcccg tgcaactctt gaacgctgta cacgcccaga
     1621 tggtctcggc ttttcgcacc ttcgctcatc gcttcgccgc cggcagtggt ggtgtattgc
     1681 ggcacacgtt gctgcaatgc gctttggcgg atgatgtggc tgtcggacac ggattgcgga
     1741 tcgctggaaa cggtattcac gaccagtgcg atttcaccgt ttttcagtgc gtcgccgatg
     1801 tgcgggcggc cttcggggac tttattgatg gtttgtacaa tcagtccctg ttcggtcagg
     1861 tattgcgccg tgccgcgtgt ggcgcagatg ccgtagccta aaacctggaa gtttttagcg
     1921 gttttgataa cgcgttcttt gtcttcttcg cgcacggaga ggaagatttt gccggtcggg
     1981 ttgaggcgtt cgcccgcacc gagttgggct ttgtagtagg cttcgccgaa gcttgcgccc
     2041 acgcccatca cttcgccggt ggagcgcatt tccggtccca aaatcgtgtc tacgcccggg
     2101 aatttgatga atgggaacac ggcttcttta acggcataga aatcggggac aacttctttt
     2161 tccacgcctt gttctttcag ggaaatacct gccatgcagc gtgcgccgac tttggcgagc
     2221 ggcacgccgg tggctttgga gacgaagggc acggtacggc tggcgcgcgg gttcacttcc
     2281 aacacgaaca ccacgccgtc ctgcacggca aactgcacgt tcatcagacc gaccacgccc
     2341 agcgcgtacg ccatcgcttt ggtttggcgg cggatttcgt cttggatttc ttcgcttaag
     2401 gagtagggcg gcagcgagca gccggagtcg ccggagtgga tgcccgcctg ttcgacgtgc
     2461 tgcataatgc cgccgataac cacgtctttg ccgtctgaaa cgcagtccac atcgacttca
     2521 atcgcgttgt tgaggaagaa atcgagcaac acggggctgt cttcggaaac ctgcacggct
     2581 tcgcgcatgt atttttgcaa ggcttcggca gagtggacaa tctgcatggc gcggccgccc
     2641 aaaacataag acgggcgcac gaccagcgga tagccgattt cttcggcttt gacgagtgct
     2701 tcttcttcgt tgtgggcgat gcggttgggc ggttggcgca gacctaagtc gttcaacact
     2761 ttttggaagc gttcgcggtc ttcggcggcg tcgatgctgt cggcggatgt gccgatgatg
     2821 tttacgccgt tttcaaccag cgcgttggcg agtttgagcg gggtttgacc gccgtaatgc
     2881 acaatcacgc cccacgggtt ttcggtgcgg acgatttcca acacgtcttc caatgtcagc
     2941 ggctcgaaat agaggcggtc gctggtgtcg aagtcggtgg acacggtttc tgggttgcag
     3001 ttcaccataa tcgtttcaaa gcccgattcg cgcagggcga gtgcggcgtg aacgcagcag
     3061 tagtcaaact cgatgccctg accgatgcgg ttcgggccgc cgccgagaat catcactttt
     3121 ttacggtcgg aaggacggga ttcgcattct tcttcgtaag tggagtaaag ataggcggtt
     3181 tcggtggcga actcggcggc gcaggtgtca acgcgtttgt aaaccggatg cagcttcagc
     3241 gcgtagcggt gttcgcgcac ttctttttcg cttacgttca acaattgtgc caaacgtttg
     3301 tcggagaagc ctttgcgttt cagacggcgt agggcggcga aatccaaatc actcaaaatg
     3361 ccgtctgaaa ccgctttttc ttccttcatc aagtcttcga tttgcgccag gaaccaaggg
     3421 tcgatggcgc agatttcgtg gatttcttcc agcgtgaagc cggcgcggaa cgcgtctgcc
     3481 acaaacagca tacgttcggg gccggggttt gccagttcgc ggcggatttc cgctttgtcg
     3541 gagcttctcg gattgaagcc gcacaagcct gtttccaagc cgcgcagggc tttttggaag
     3601 ctttcctgaa tcgtgcggcc catcgccatc acttcgccca cggatttcat ctgcgtggtc
     3661 aggcggtcgt ctgcggcagg gaatttttca aacgcaaaac gcgggatttt ggttaccaca
     3721 tagtcgatgg acggctcgaa tgacgcgggg gttttgccgc cggtgatgtc gttgcgcaac
     3781 tcgtccagct taaagccgac cgccagtttc gccgccacct tcgcaatcgg gaagcccgtc
     3841 gctttggaag ccagcgcgga cgaacggctc acgcgcgggt tcatctcaat cacaatcatc
     3901 tcgccgtttt cagggttcac cgcaaactgc acgttcgagc cgccggtatc cacgccgatt
     3961 tcgcgcaata ctgccaacga agcattacgc atgatttggt attctttgtc cgtcagcgtt
     4021 tgcgcaggcg caaccgtaat cgagtcgccc gtatgcacgc ccatcgggtc gaagttttca
     4081 atcgagcaga taatgatgca gttgtcgttc ttgtcgcgca ccacttccat ctcgtactct
     4141 ttccagccga gaacagactg ctcaatcagc agctcgtgcg taggcgacgc atcgaaaccg
     4201 cgttcgcaaa tcgccaaaaa ctcatcttta ttgtaggcaa tgccgccgcc cgaaccgccc
     4261 atcgtgaaag acggacgaat cagggtaggg aagccgacct gttcttgcgc tgccaaagct
     4321 tcgttcatcg tgtggcagac aaaagatttc gggcaggaga ggccgatttt ttccatcgct
     4381 tctttaaaac gaccgcggtc ttccgccttg tcaatcgcgt cttccgtcgc gccgatcagc
     4441 tcgacattgt atttcgccag cacgccgttg cgcgccaaat ccagcgcaca gttcagcgcg
     4501 gtctgaccgc ccatcgtggg cagaatcgca tcaggacgct ccttggcgat aatcttctcc
     4561 accgtctgcc acataattgg ctcgatgtag gtaacatccg ccatttcagg gtcggtcatg
     4621 atggtggcgg ggttggaatt caccagaatg actttatagc cttcttcacg caaagcctta
     4681 caggcctgtg cgcctgaata gtcaaattcg caggcctgac cgataacgat agggccggcg
     4741 ccgatgataa ggatggattt taggtcggta cgtttgggca tgggtggtta ctcttgaatt
     4801 aaagaaggtt gttttgttac atagctttta agaaaagtat ttcccttttc taaaattgaa
     4861 gctaaaacat catcttctat gttagataaa atattctcta aatctgcgct tgatttaatt
     4921 ttaaagaatt cttttgtttg agaatggtat acaagagaag gtttatttag ctgtaaaagt
     4981 tctgctatat tatttaatga accaatactc ttaccatccc ataaaataaa gccataatca
     5041 gcaatttctg ccattttctt atcttttgct gtataaaata cccttccagt tcctttgctg
     5101 tctacttgga caaactgcca attccccaca ttatttcggt aaattttgcc agaaaagtaa
     5161 atatgcacat tagcataatc ttgttcttgt agaaattttt ggatagcttt atcagcccca
     5221 ttagcatctc caataacaat atcaaaatta ttgctaagaa tattgttaat tctttctcgt
     5281 atttgtggat ttagtcgtga aatgctgcgt gaaccagaaa agaaaatagt gcgcattttt
     5341 atcctctagt ctttgtcatt gctaaaacaa ttacagatct agcatttttt gaaaacaatt
     5401 tttcagttga tatttccaat gttgctccgc tatcaaataa atcatcaatt actaaaatat
     5461 tcttattgga tagatctata ttgtcaattg tgatggaatt attcagtatt tctagttttt
     5521 ctgatttttc ttcaatattt ttgagtggtg tgtgtgagct agattttctt aaaataggag
     5581 aatatggaat attcaagcga tcacttagtt ctttggcaat taattgaact ggttgattaa
     5641 tacgctctgt tgtaaaaggg gcgggaacaa ttaaatttat agattctaaa ccactaaatt
     5701 tttgtaaaat atagtctacc agcaaagaaa cattttgggt ttgattacga tattttaatt
     5761 gataaaccca ttctccaatc acacttctct tgctatcaaa gtgaggatgc cctaattcat
     5821 cataacctaa caaaatactt ttttgcatat gatggtctaa agcaaatcct tttgtccagt
     5881 taccatttag ttctatcgcc atttcattga ctccttgtca aaattaagta taacgagcaa
     5941 tcctagcaag ccgtagcccg catgtagggt atgtgcggta cgcacgcacg cgttcttcat
     6001 tttccctgta accccaaccc accgcatgcg cgccttgcgg cacacactct gccgacggat
     6061 tcaaaggtcg tctgaaaaaa cgctcgcggc gtttgttaca tctgccttgc gataaaggct
     6121 gcctgaaaaa ttcccactgt tgatatttcg ggcattcttt ctcaaaccgc ctgcaaccgc
     6181 aaaatctgct gaaacctact ccctcccccg tgggggaggg ctggggagag ggcattctcc
     6241 gaatttcggc aacctttcct aacactctaa ccgccaagac acaagccttg cggcttgttg
     6301 ccctctctct aacgctttcc cacagggaga gaggacgggg cggctgttgg aattaagggt
     6361 tctgcaggaa aaacaggttg tgcgggctgt tttttgtttt tcagacggcc tttataaatg
     6421 ctcaattcag tcggctttat cctattattt tcaataatcc aatcaaaatc agccatctgc
     6481 tatcgtgcag cttgcttttc caattcttgc aacacgagca ggatttctgt cagcacatcg
     6541 tttgtctgct gtaaaatctc gtgattccaa aaccgcagta cggtaaagcc caagctgttg
     6601 agatatgccg tccgcgcgtg gtcgtatgcg gcttgttctg tgtgctgccc tccgtctgct
     6661 tcgacaatca acttgggcgt tacgcacata aaatcaacaa tatagtttcc catcggctgc
     6721 tggcggcgga atttatagcc gttcagacgg cctgcccgca ggtgctgcca caattttgct
     6781 tccgcctcgc tcatttcttg gcgcatggct ttggcgcgtt gatgcaggac ggggttgtcg
     6841 gcggttaaaa gtttctcgtg cgtgctcatt ctgttgtcgg gttactgttt gtgtaagcct
     6901 tacagtttgt tgccctctct ctgactctct cccatgggag agaggacgtg gtggcggttg
     6961 ggattaaggg ttctgcaagg aaaacaggtt gtgcaggctg ctttttattt ttcagatgac
     7021 ctgaaacaac agctgcaaat ctaagttgcc tttcaaatcg cctgcaaccg caaaatctgc
     7081 tgcaaccttc tccctccccc gtgggggagg gctggggaga gggcattctt cgaatttcgg
     7141 caaccttccc caacacccta accgcccaaa cacaagcctt gctgtttgtt gccctctctc
     7201 taacgctttc ccacagggag acaggacggg gcggctgtag tgattaaggg ttttgcaagg
     7261 aaaacaagga aaacaagttg tacaggctgt tttttatttt tcaagcgacc tgaaatcaac
     7321 gcttgtaaat ccaagtcgct tttcaaactg cctgcaaccg caaaatctgc tgcaacctac
     7381 cccctccccc gtgggggagg gctggggaga gggcattttc caagttgcgg caatctttcc
     7441 caaatccctt agtcttctaa aatacaagcc ttacggttgt tgccaaatga aacttcttcc
     7501 atacccaaaa cttgcgtgta aaacgcaatg gttcggtcaa tgtcggcaac ggtcagtacc
     7561 agatggtcga gtgcgctaat cttcatttcc cgctttcttt ttcaggcggc ggcagtgccg
     7621 tctgaaagcc attatgcccg ttttgccgct ttcatattgc caatgaattt gtcaaacaaa
     7681 tagccgacat cttgcggacc ggggctggct tcggggtggc cttggaagca gaacacaggt
     7741 ttgtcggtca gctcgatgcc ttgcaaagtg ttgtcaaaca aggatttgtg ggtaatgcgt
     7801 gcgttagcgg gcagggtgtc ggcatcaacg gcaaaaccgt ggttttggct ggtgatgacg
     7861 actttgccgc tgtccaaatc ttgcacaggg tggttcgcac cgtggtggct gaagcgcatt
     7921 ttcagggttt tcgcgccgat agcgaggctg atgagctggt gtcccaagca gatgccgaaa
     7981 atcggtttgc cgctttccat cagtttttgc acggcttcga tggcgtaggt gcaaggctcg
     8041 gggtcgccgg ggccgttgga caggaacacg ccgtcgggat tgagtgccaa cacgtcttgt
     8101 gcgctcgttt gggcggggac gacggtcagg cggcagccgc gcgaggcgag catacgcagg
     8161 atgttggttt tcacgccgaa atcgtaggcg acgacgtggt aaggctgttc gtcaggggta
     8221 acgaaaccct tgcccaattc ccattcgcct tccgtccatt cgtaagtttc cgtgcaggaa
     8281 acttcttttg ccaagtcttt gccgaccata ctgccgaacg cggcgatgag ttcttgcgct
     8341 ttttcgattg tggcatccgc accggtcaga atcgcgccgc cttgcgcgcc tttttcgcgc
     8401 aacagcgtgg tcaggcggcg ggtatcgatg tcggcgatgg cgacggtttt gttgcgtacc
     8461 agatagtcgt gcaggctttc ggaggcgcgg aagttgctgt gcaagagcgg caggtcgcgg
     8521 ataatcaggc cggcggcata aacgctgcgg ctttcttcat cttcggcgtt ggtgccggtg
     8581 ttgccgatgt gtgggtaggt gagggtaacg atttgtttgc agtaggacgg gtcggtcagg
     8641 atttcctgat agccagtcat cgaagtattg aacacgactt cgccggaagt cgaaccttcg
     8701 taaccgattg atgtgccgtg gaatacgctg ccgtcagcga ggacgaggag ggcgggggtg
     8761 ctcatgatgg gaatcctgtt tttaataaaa ttcttgacaa tgccgtctga agggacttcg
     8821 gcagggggca tccggtcgga aaaatccggt caaaaaaaaa cacgccgcgc aagatagacg
     8881 cgtaacgtgc ttttcgggca agtgcctata ccctgaaagc agcatatttt aagacgaaac
     8941 atacccgatt tcaagcgcaa acgcggcagg cgggctgata tgttcgcgcg aaaacggaaa
     9001 tccgtggcgt aaaaccgccc gctctgcgcc cactatgccc gttacgcatt tccccacgtc
     9061 cgtccggcga aactatggga atacccgaa
//
LOCUS       DAWGKF010000077         8965 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.077, whole genome shotgun sequence.
ACCESSION   DAWGKF010000077 DAWGKF010000000
VERSION     DAWGKF010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8965)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8965)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8965
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.077"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            129..971
                     /locus_tag="WHR07_001253"
     CDS             129..971
                     /locus_tag="WHR07_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HEZ2130467.1"
                     /translation="MCQLLGMNCNTPTDIMFSFEGFRRRGGITDHHADGFGIGFFEGK
                     GVRLFHDDKPSANSPVADLVRAYQIKSENVVAHIRKASQGQTSLANTHPFMREMWGGY
                     WLFAHNGHLIDFFPEQGEFFHPVGTTDSERAFCHILNRLRTRFAARPDDDTLFDAIAG
                     LTHEIRKFGLFNFMLSDGIALFAHASTLLHYIVRQAPFGKARLLDDDVMVDFAEVTTP
                     SDRVAVIATLPLTRDESWSQLAVDELVMFREGNIVRHDRPENPVYMSAEEGLEIARAA
                     GVSV"
     gene            1000..1464
                     /gene="nrdR"
                     /locus_tag="WHR07_001254"
     CDS             1000..1464
                     /gene="nrdR"
                     /locus_tag="WHR07_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor NrdR"
                     /protein_id="HEZ2130468.1"
                     /translation="MKCPFCAHPDTRVADSRLMEERNAVRRRRHCPSCGKRFGTLETA
                     ELKMPAVIGPDKKRSPFNAQRLRNDLTAAARKSALTPEQIDETVRLTEHRLYTSGQRD
                     IPSTELADMVLKELLEHNTEAAIRFAALHKRFDSPEHFASWLAQAVKTGGKA"
     gene            1496..2605
                     /gene="ribD"
                     /locus_tag="WHR07_001255"
     CDS             1496..2605
                     /gene="ribD"
                     /locus_tag="WHR07_001255"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HEZ2130469.1"
                     /translation="MFSDTDISMMETALRLAALGRFSTSPNPRVGCVIAHGSQIVGQG
                     FHVKAGEPHAEVHALRQAGEMAQGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAA
                     MRDPNPLVAGKGLALLEAAGIKTECGLLEHQARKLNRGFLSRIERRRPFVRLKCAVSL
                     DGKTALSDGSSFWITGEDARADVQVLRAESCAVLTGIGTVLADNPRLNVRAFPTLRQP
                     ARIVLDSRLRLPPNSHLVTDGQSPTYIATLERNEDRLHPYREHAHVRILMPSETADGK
                     IDLHHLMRLLADEGFGEIMVEAGSELTSAFLAEDLADEIVLYRSPKILGGGSGLFCLP
                     ENRAALSAPPLWTPVSSEILGHDIKTVFRKNGNAF"
     gene            2800..4221
                     /locus_tag="WHR07_001256"
     CDS             2800..4221
                     /locus_tag="WHR07_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HEZ2130470.1"
                     /translation="MDTKEILGYAAGSIGSAVLAVIILPLLSWYFPADDIGRIVLMQT
                     AAGLTVSVLCLGLDQAYVREYYAAADKDTLFKTLFLPPLLSAAAIAALLLSHPSLPSE
                     ILFSLDDAAAGIGLVLFELSFLPIRFLLLVLRMEGRALAFSSAQLVPKLAILLLLPLT
                     VGLLHFPANTAVLTAVYALANLAAAAFLLFQNRCRLKAVRHAPFSPAVLHRGLRYGIP
                     IALSSIAYWGLASADRLFLKKYAGLEQLGVYSMGISFGGAALLFQSIFSTVWTPYIFR
                     AIEENAPPARLSATAESAAALLASALCLTGIFSPLASLLLPENYAAVRFIVVSCMLPP
                     LFCTLVEISGIGLNVVRKTRPIALATLGALAANLLLLGLAVPSGGARGAAVACATSFW
                     LFFVFKTESSCRLWQPLKRLPLYTHTLLCLTSSAAYTCFGTPANYPLFAGVWAVYLAG
                     CILRHWKDLHKLFHYLKKQGFPL"
     gene            4218..5292
                     /locus_tag="WHR07_001257"
                     /pseudo
     CDS             4218..5292
                     /locus_tag="WHR07_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258336.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
     gene            5306..6478
                     /locus_tag="WHR07_001258"
     CDS             5306..6478
                     /locus_tag="WHR07_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ2130471.1"
                     /translation="MNITIVAPYCSLPSEPHFNRFWYLAELLSQSHDVLLITSNFKHY
                     DKSFRRPEDAEAASQGRLKVMLLEESGYSKNVSLGRVTSHHRFVKHFEKWLENCRPGE
                     QDVVFSAYPLIATNLLLGKHKARLGYKLIVDVQDVWPESFSSVVPFLKKVPHKLLPFA
                     SRANRAYRYADALVAVSQTYLDRAKETNPNVPGEVIYIGADFPKLDAAPAKDFGDDKT
                     RFFYLGTLSYSYDVETVCKGVRKLLDDGENVELHIMGGGPDLDRLKQYACDGIKFYGY
                     IPYAEMMSVAKGCDIAINAIQSYSMASITNKLSDYMALQKPILNSQVNDEVAEVLTLL
                     PHADYRSGDVDGFVQADKDILKRKNDPVQSEEIVRRFKRDVAYQKIVNLIERLAHE"
     gene            6471..7088
                     /locus_tag="WHR07_001259"
     CDS             6471..7088
                     /locus_tag="WHR07_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_046551259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HEZ2130472.1"
                     /translation="MNKFFKRLFDIIASASGLIILSPVFLILVYLIRKNLGSPVFFIQ
                     ERPGKDGRPFKMIKFRSMRDAIDKDGNPLPDSERLTPFGKKLRAASLDELPELWNVLK
                     GDMSLVGPRPLLIQYLPLYDNFQNRRHEMKPGVTGWAQVNGRNAISWDEKFAHDVWYI
                     DNFSFWLDIKILFLTVKKVFVKEGISAEGEATMPYFTGNKTDEKK"
     gene            7075..8049
                     /locus_tag="WHR07_001260"
     CDS             7075..8049
                     /locus_tag="WHR07_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEZ2130473.1"
                     /translation="MKKNNILILSAGRRVELVQDFQTEAARFSDGISVFATDLNPRMS
                     SACHVSDGSFEVPPISADSYIDSIFNLAVRENIGLIIPTIDTELQKLADERERFEAAS
                     VHIVVSDSDFIAQCRDKRKTATLFARYGIRSPEIYDRKKLVFPCFAKPYDGSRAIGAK
                     RIDTPADLTPEVLADTKLMFCQFIDIENKFSEFTVDMYYDRQCRLKCAIPRKRLEVRS
                     GEISKGVTCKNSLYQTLLEKMSVLQGARGCITAQFFYNEETGEFYGVEINPRFGGGFP
                     LTYAAGGNYPSRLMREYLGDEEIPFSDDWENNLIMLRYDAKVLVHEND"
     gene            8036..8722
                     /locus_tag="WHR07_001261"
     CDS             8036..8722
                     /locus_tag="WHR07_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ2130474.1"
                     /translation="MKTINPETTVIVFDLDDTLYSEYEYKLSGIRSVIDTVAALYPDW
                     NSDNLWRNIDPDGKDWLDKLCRHCGFNESEKQVLLWQYRLHRPTLTPYAPPDFLSELT
                     APFAARALITDGRSLTQRLKLEALGLSSLFDDILISEACSSEKPDSKRFRHLQDKYAD
                     KAGCFIYIGDNISKDFIAPNTLGWITIGLLPSGQNIHRHQPESFNTEYHPDFWVNSFQ
                     DLVPIIDSNT"
BASE COUNT         2035 a         2806 c         2202 g         1922 t
ORIGIN      
        1 atcttaagtt tccgtctttg ttttctgttt tcgagggaat aatggggaac aagccgtatt
       61 tcagacggca ttttcagttc ggggtataat ccgaatactt gcgaccatct gaatcattgg
      121 gacaaaccat gtgtcaactg ctgggcatga actgcaatac gccgaccgat attatgtttt
      181 cctttgaagg cttccgccgc aggggcggca ttaccgacca ccatgccgac ggtttcggca
      241 tcggcttttt cgaaggcaaa ggcgtgcgcc tgttccatga cgacaaaccc agtgccaatt
      301 cgcccgtcgc cgacctcgtg cgcgcctacc agattaaatc ggaaaacgtc gtcgcccata
      361 tccgcaaagc atcacaagga caaacctcgc tggcgaacac ccatcccttt atgcgcgaaa
      421 tgtggggcgg ctactggctg tttgcccaca acggacattt gattgatttt ttccccgaac
      481 agggcgaatt tttccacccc gtcggcacaa ccgattccga acgcgcgttc tgccacatcc
      541 tcaaccgcct gcgcacccgc tttgccgccc gtcccgacga cgacacgctg tttgacgcga
      601 ttgcggggct gacgcacgaa atccgcaagt tcgggctgtt taactttatg ctttcagacg
      661 gcattgccct gtttgcccac gccagcacac tgctgcacta catcgtccgc caagccccgt
      721 tcggcaaggc gcgcctgctc gacgacgacg tgatggtcga ttttgccgaa gtaaccacgc
      781 cctccgaccg cgtcgccgtt atcgccaccc tgccactgac ccgcgacgaa tcatggtccc
      841 aacttgccgt ggacgaactg gtcatgttcc gcgaaggcaa catcgtccga cacgaccgtc
      901 ccgaaaaccc cgtctatatg agtgccgaag aaggtctgga aatcgcccgc gccgccggcg
      961 tatcggtttg acgttcagac ggcatcagga agaaacgcta tgaaatgccc gttttgcgcc
     1021 caccccgaca cccgcgtcgc cgattcgcgc ctgatggaag aacgcaacgc cgtgcgccgc
     1081 cgccgccact gccccagctg cggcaaacgc ttcggcacgc tcgaaaccgc cgaactcaaa
     1141 atgcccgccg tcatcggtcc ggacaaaaaa cgttcgccct ttaatgcaca acgcctccgc
     1201 aacgacctga ccgccgccgc ccgaaaatcc gccctgacac ccgaacagat cgacgaaacc
     1261 gtccgcctga cggaacacag gctctacact tcgggtcagc gcgacatccc ctccaccgaa
     1321 cttgccgaca tggtgctaaa agagctgctt gagcacaaca cggaagccgc catacgcttc
     1381 gccgcactgc acaaacgctt cgacagcccg gaacatttcg cctcgtggct ggcgcaagcc
     1441 gtcaaaacag gcggcaaagc ctgattcccc caacccatac tgatacggta tccctatgtt
     1501 ttcggacaca gatatatcca tgatggaaac cgccctccga cttgccgctt tggggcgttt
     1561 ttccacttcg cccaatccgc gcgtcggctg cgttatcgca cacggcagcc aaattgtcgg
     1621 gcagggcttc cacgtcaaag cgggcgaacc ccatgccgaa gtccacgccc tgcgtcaggc
     1681 gggcgaaatg gcacaaggcg cgaccgcctt tgttaccctc gaaccgtgca gccattacgg
     1741 acgcacaccg ccctgcgccg aagctctgct ccgttccggc gtaacacgcg tcgtcgccgc
     1801 catgcgcgac cccaacccgc tggttgcagg caaagggctt gccctgctcg aagcagcagg
     1861 catcaagacg gaatgcggtt tactcgaaca tcaggcaagg aaactcaacc gaggcttcct
     1921 gtcgcgcatc gaacgccgcc gcccctttgt ccgcctcaaa tgcgccgttt cgctggacgg
     1981 caaaaccgcc ctttcagacg gcagcagctt ttggattacc ggcgaagacg cgcgtgccga
     2041 cgtacaggtt ttgcgtgccg aaagctgcgc ggtgctgacc ggcatcggca cggtgttggc
     2101 ggacaatccc cggctcaacg tccgcgcttt tccaactttg cgccaacccg cacgcatcgt
     2161 tttagacagc cgcctgcgcc tgcccccgaa cagccatttg gttaccgacg gacaatctcc
     2221 gacctacatc gccacactcg aacgcaacga agacagactg cacccctatc gggaacacgc
     2281 acacgtccgc atcctgatgc cgtctgaaac ggcagacggc aaaatcgacc tgcaccacct
     2341 gatgcgcctc cttgccgacg aaggtttcgg cgaaatcatg gtcgaagcag gctccgaact
     2401 cacatccgca tttttggcag aagatttggc ggacgaaatc gttttatacc gctcgcccaa
     2461 aatcctcggc ggcggcagcg gtttattttg cctgcccgaa aaccgcgccg ccctttccgc
     2521 accgcccttg tggacacccg tttcaagcga aatcctcgga cacgacatca aaaccgtgtt
     2581 ccggaaaaac ggcaacgcct tttaaagggt ttgcgccgtt tcactatata ataacgccga
     2641 taaaaaacgg ccccgttcag accgccgccc gcccgaaaaa acgcaacccg gactgccgca
     2701 ccccgccggc agccgcgacg gtctgaaagc cgtcaaattc cgatcaagaa aggcttcaga
     2761 cggcacaggc agcatcccgc cgccgcccgg acatcaaaaa tggacacaaa agaaatcctc
     2821 ggctacgcgg caggctcgat cggcagcgcg gttttagccg tcatcatcct gccgctgctg
     2881 tcgtggtatt tccccgccga cgacatcggg cgcatcgtgc tgatgcagac ggcggcgggg
     2941 ctgacggtgt cggtgttgtg cctcgggctg gatcaggcat acgtccgcga atactatgcc
     3001 gccgccgaca aagacacctt gttcaaaacc ctgttcctgc cgccgctgct gtctgccgcc
     3061 gcgatagccg ccctgctgct ttcccacccg tccctgccgt ctgaaatcct gttttcactc
     3121 gacgatgccg ccgccggcat cgggctggtg ctgtttgaac tgagcttcct gcccatccgc
     3181 tttctcttac tggttttgcg tatggaagga cgcgcccttg ccttttcgtc cgcgcaactc
     3241 gtgcccaagc tcgccatcct gctgctgctg ccgctgacgg tcgggctgct gcactttcca
     3301 gcgaacaccg ccgtcctgac cgccgtttac gcgctggcaa accttgccgc cgccgccttt
     3361 ttgctgtttc aaaaccgatg ccgtctgaag gccgtccggc acgcaccgtt ttcgcccgcc
     3421 gtcctgcacc gggggctgcg ctacggcata ccgatcgcac tgagcagcat cgcctattgg
     3481 gggctggcat ccgccgaccg tttgttcctg aaaaaatatg ccggcctgga acagctcggc
     3541 gtttattcga tgggtatttc gttcggcggg gcggcattat tgttccaaag catcttttca
     3601 acggtctgga caccgtatat tttccgcgca atcgaagaaa acgccccgcc cgcccgcctc
     3661 tcggcaacgg cagaatccgc cgccgccctg cttgcctccg ccctctgcct gaccggcatt
     3721 ttctcgcccc tcgcctccct cctgctgccg gaaaactacg ctgccgtccg gtttatcgtc
     3781 gtatcgtgta tgctgccgcc gctgttttgc acgctggtag aaatcagcgg catcggtttg
     3841 aacgtcgtcc gaaaaacacg cccgatcgcg ctcgccacct tgggcgcgct ggcggcaaac
     3901 ctgctgctgc tggggcttgc cgtaccgtcc ggcggcgcgc gcggcgcggc ggttgcctgt
     3961 gccacctcat tctggttgtt ttttgttttc aagacagaaa gctcctgtcg cctgtggcag
     4021 ccgctcaaac gcctgccgct ttatacgcac acattgctct gcctgacctc ctcggcggcc
     4081 tacacctgct tcggcacacc ggcaaactac cccctgtttg ccggcgtatg ggcggtatat
     4141 ctggcaggct gcatcctgcg ccactggaaa gatttgcaca aactgtttca ttatttgaaa
     4201 aaacaagggt ttccattatg aaaatcatcc tgaccacttc tatgtcgggc ttgggcggca
     4261 cggaaaccgc caccgtccgc ctcgggcggc tgctcaaacg gcgcgggcac gacatcatcc
     4321 ttgcttcttc ggacgggcct tttgtcggag aggcgcaagc atcgggcatc cgttggcagc
     4381 cggttgattt ttaccggggc gggcttgccg gctacctcaa aagcaccttt gcctacgccc
     4441 ggatgctgcg ccgcgaacaa cccgacatca tcgactgcca aatggcgcgc gttgttccag
     4501 cctgcgccct tgccgccaaa atcgtttcgc cgaaaaccaa aatcatctac cactcgcacg
     4561 gtttggacgc ggcaacctac cccaaaatcg ccaagctctt cgacaagctg ggcgtgtaca
     4621 tcatcggcaa ctgtaaacac gagcgcgaaa aactcatccg ccacggcttc cccgccggcc
     4681 ggattgccta cgcctacaac gcactccccc ccccccccgg aatttcattt ccggaaaacc
     4741 aaaaaagaat gcgccgtact cggcacactt tcccgtttgg acaccgtccg cgccgtgcat
     4801 ctgatgttgg atattttgaa gaaaatggtt gaccgcggta tgcctgtacg cctcaacgtt
     4861 gcaggtatcg gcgaagaaat ggacaacctc aaagcccaag ccaaacgttt gggcattgaa
     4921 gacaaagtca ccttcctcgg cggcgtccgc gatttgaccg gctacttcaa agaagtcgat
     4981 attttggtga acacgccgca ttgcgtgggc gatcacggcg caggtgtcgg caacaatatt
     5041 ttggaagccg gcctttacga cacgcctgtc gtgacctaca acatggcggg catttccgaa
     5101 atggtcatta ccggccaaac cggctactgc attcctttcg gcgacgacga agcatttatc
     5161 gaagccttcg atacactcat caagcatcca gagttgcgca gccaaatggg caaagccctg
     5221 cacaaacatg tcgaaacctt atgctccgac gacgaaatct accgcaccac catggctgcg
     5281 tacgaaatgt aaggccgtct gaaacatgaa cattaccatc gtcgcccctt attgctcgct
     5341 gccgtccgag ccgcatttca accgcttctg gtatcttgcc gagctgttgt cgcagtcgca
     5401 tgacgtgttg ctgattacca gcaacttcaa gcactacgac aaatctttca gacggcccga
     5461 agatgccgag gccgcctcac aaggccgtct gaaagtcatg ctgttggaag aaagcggata
     5521 cagcaaaaac gtgtctttag gacgcgtgac cagccatcac cgcttcgtca aacattttga
     5581 aaaatggttg gaaaactgcc gtccgggcga acaagacgtc gtcttttccg cctatccgct
     5641 gattgccacc aacctgctgt tgggcaaaca caaagcgcgt ttgggttaca aactgattgt
     5701 cgatgtgcag gacgtatggc cggagtcttt ctcctcggtc gtaccgtttt tgaaaaaagt
     5761 accgcacaag ctgctgccct ttgcttcacg cgccaaccgg gcctaccgct acgccgacgc
     5821 gctggttgcc gtatcgcaga cttatctcga ccgcgccaaa gaaaccaatc cgaacgtacc
     5881 cggcgaagtc atctatattg gtgctgactt tcccaaactc gatgccgcac ctgccaaaga
     5941 ttttggcgac gacaaaaccc gctttttcta cttgggcacg ctcagttaca gctatgacgt
     6001 ggaaaccgtg tgcaaaggcg ttcggaaact tttggacgac ggcgaaaatg tagagctgca
     6061 catcatgggc ggcggccccg atttggacag gctcaaacaa tatgcctgcg acggcatcaa
     6121 gttttacggc tacattcctt acgccgaaat gatgtcggtc gccaagggct gcgacattgc
     6181 catcaacgcc atccagtcct attcaatggc atcgattacc aacaaactct ccgactatat
     6241 ggctttgcaa aaaccgattc tgaacagcca ggtcaacgac gaagttgccg aagtccttac
     6301 cctgctaccg catgcggact accgctccgg cgatgtggac ggtttcgttc aagccgataa
     6361 agatattttg aagcgcaaaa acgatcctgt tcagtccgaa gaaatcgtcc gccgcttcaa
     6421 acgcgacgtt gcctatcaaa aaatcgtcaa cctgattgaa agattagctc atgaataaat
     6481 ttttcaaacg cctgtttgac attattgcct ccgcctcagg gctaattatc ctgtcgcctg
     6541 tgtttttgat tttggtgtac ctcatccgca aaaacttagg ctcgcccgtg ttcttcatcc
     6601 aagagcggcc gggcaaggat ggcaggccgt ttaaaatgat taaattccgc tccatgcgcg
     6661 atgcaatcga taaagacggc aacccgctgc ccgacagcga gcggctcaca cccttcggca
     6721 aaaaactgcg tgccgctagt ttggacgaac tgcctgaatt atggaatgtc ttaaaaggcg
     6781 acatgagcct ggtcggcccg cgcccgctgc tgatacaata tctgccgctg tacgacaact
     6841 tccaaaaccg ccgccacgaa atgaaaccgg gcgtgaccgg ttgggcgcaa gtcaatggcc
     6901 gcaacgccat ttcatgggat gaaaaattcg cccacgatgt ttggtacatc gacaacttca
     6961 gcttttggct ggatatcaaa attttgttcc tgacggttaa aaaagtcttc gtcaaagaag
     7021 gcatctcagc cgaaggagaa gccaccatgc cttatttcac gggtaataaa actgatgaaa
     7081 aaaaataata tactgattct gtcggcaggt cgccgtgtcg aattggtgca ggacttccaa
     7141 accgaagccg cacgtttttc agacggcatc agcgtttttg ccactgacct caacccccgc
     7201 atgtcttctg cctgccatgt ttcggacggt tcatttgaag tgccgccgat tagtgccgat
     7261 tcatatatcg acagcatttt caatctggcg gtacgcgaaa atatcggttt aatcatccca
     7321 accatagaca ccgaactgca aaagctggca gacgagcgcg aacgctttga agcggcaagt
     7381 gtccacatcg tcgtttccga ttcggacttc atcgcacaat gccgcgacaa acggaaaacc
     7441 gccaccttgt ttgcccgcta cggcatacgc tcacccgaaa tttacgaccg caagaagttg
     7501 gttttccctt gcttcgccaa gccttatgac ggcagccgcg ccatcggtgc aaaacggatt
     7561 gacacacctg ccgacctgac accggaagtc ttggcagaca ccaaattaat gttctgtcag
     7621 tttatcgaca tcgaaaataa attttccgag tttaccgtcg atatgtatta cgaccgtcaa
     7681 tgccgtctga aatgcgccat cccgcgaaaa cgcttggaag tgcgctccgg cgaaatcagc
     7741 aaaggcgtta cctgcaaaaa cagcctctac caaacgctgc tggaaaaaat gtcggtattg
     7801 cagggcgcgc gcggctgtat cacggcgcag ttcttctaca acgaagaaac cggcgaattc
     7861 tacggcgtgg aaatcaaccc ccgcttcggc ggtggcttcc cgctgacgta tgccgcaggc
     7921 ggcaattatc cgagccggtt gatgcgcgaa tacctcggcg acgaagaaat cccgttttca
     7981 gacgactggg aaaacaacct cattatgttg cgctacgatg ccaaggtctt ggttcatgaa
     8041 aacgattaat cctgaaacca ccgtcatcgt cttcgacttg gacgataccc tgtattcgga
     8101 atacgaatac aagctctccg gtatccgttc ggtcatcgat accgttgccg cactgtatcc
     8161 cgattggaat tcagacaacc tatggcgcaa catcgacccc gacggcaaag attggctgga
     8221 caaattgtgc cgccactgtg gttttaatga atcggaaaaa caggttcttt tgtggcaata
     8281 ccggctgcac cgcccgacgc tgactccgta tgctccgccg gatttcctgt ccgaactgac
     8341 cgcgcccttc gccgcacgcg cgctgattac cgacggcaga agcctgaccc aacgcctgaa
     8401 gctggaagcc ttgggtctgt cttccctgtt tgacgacatc ctcatctctg aagcctgctc
     8461 ttcggaaaag cccgacagca aacgcttccg ccatcttcaa gacaaatatg ccgacaaggc
     8521 aggctgcttc atctatatcg gcgacaacat ttccaaagac tttatcgcgc cgaacacttt
     8581 gggctggata accataggat tgcttccctc cggacagaac atccaccgcc accagcctga
     8641 aagttttaac acagaatatc atcccgactt ttgggttaac tcctttcaag atttagttcc
     8701 tataattgat tcaaatactt aaccattaca taatcaaaca tgcactcaca atattaaaag
     8761 gactatttca tgacaaaata ttattcatgg ggcgtaaacg gctttccgcc ctacgttttc
     8821 gacaccattt ggaaacgatg gaagttgaat gggcgcgggg gcggttatcg tgtgcgacat
     8881 cccggacggc atgaccgtcg cgggcaatcc ggcaaagccg ctgccgcgca aaaaccccaa
     8941 gaccgggacg gcataagcga ttaaa
//
LOCUS       DAWGKF010000078         8922 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.078, whole genome shotgun sequence.
ACCESSION   DAWGKF010000078 DAWGKF010000000
VERSION     DAWGKF010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8922)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8922)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8922
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.078"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            188..622
                     /locus_tag="WHR07_001262"
     CDS             188..622
                     /locus_tag="WHR07_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HEZ2130475.1"
                     /translation="MNFALSVITFTLASFLPVPPAEAAVFTWKDGGGNSYSDVPKQLH
                     PDQSQILNLRTRQTKPAVKPAQADAGKRTDGAAQENNPDTAEKNRQLEEEKKRIAETE
                     RQNKEENCRISKMNLKAVGNSNAKNKDDLIRKYNNAVNKYCR"
     gene            complement(671..2014)
                     /locus_tag="WHR07_001263"
     CDS             complement(671..2014)
                     /locus_tag="WHR07_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEZ2130476.1"
                     /translation="MFHSVNVFTGETLYRRPAQDYAEFERRLADLKMRGGAFAQLGVT
                     ERAARLQKFADRLEAEKERFAEMVCEEVGRCLHECRAEIGKSIELIRYYARLAPELLA
                     HKTIATQASLSQVRFEPLGVVFAVMPWNYPVWQVLRFAVPAMCAGNACAVKPAPSVAR
                     VSQALFDLVSDGIPLAGAWLDEAGTLKAVEDTDAMAFTGSTHTGRILAAHAGANLKKT
                     VLELGGSNAFIVMPDADLERAAAEACYSRFRDAGQSCNAAKRIIVTEAAADRFITLFL
                     AECAKLKMGDPKHPDTTLAPLHREDLRDRVHGQVEDAVSNGAVCLTGGKIPQGRGWFY
                     PATVLDRVNPACRVWREEVFGPAALILRAENEEHAIALANDSPFGLGACIYTADTERA
                     WRFAEKIQAGSVFINRHTSSDLRLPFGGVKDSGYGRELSEFGLYEFVNVKTYWQK"
     gene            complement(2019..2672)
                     /locus_tag="WHR07_001264"
     CDS             complement(2019..2672)
                     /locus_tag="WHR07_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEZ2130477.1"
                     /translation="MGLGMEIGKLIVAFLVLINPFSALSLYLDLTNGHSTKERRKVAR
                     TAAVAVFAVIAVFALIGGTLLKVLGISVGSFQVGGGILVLLIAISMMNGNDNPAKQNL
                     GAQPETGQARPARNAGAIAVVPIAIPITIGPGGISTVIIYASAAKTYSDIALIIVAGL
                     VVSAICYAILIVAGKVSRLLGATGLTILNRIMGMMLAAVSVEIIVSGLKTIFPQLAG"
     gene            2823..3113
                     /gene="gatC"
                     /locus_tag="WHR07_001265"
     CDS             2823..3113
                     /gene="gatC"
                     /locus_tag="WHR07_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEZ2130478.1"
                     /translation="MALTLADVDKIARLSRLHLTAAEKEKSLQELNDIFAMVEQMQTI
                     NTDGIEPMAHPHEAALRLREDEVTETDRAAEYQAVAPEVRNRLYIVPQVIEE"
     gene            3176..4621
                     /gene="gatA"
                     /locus_tag="WHR07_001266"
     CDS             3176..4621
                     /gene="gatA"
                     /locus_tag="WHR07_001266"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HEZ2130479.1"
                     /translation="MTQYTLKQASVLLQSKQISAVELASAYLAAIAEKNPALNGYITI
                     DQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASKMLDNFISPYTA
                     TVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGGSSGGSAAVVA
                     ARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAE
                     DCAILLNAITGFDPKDSTSLEREKEDYTRDLNQPLKGVKIGLPKEYFGEGNSADVLTA
                     LQNTIDLLKAQGAELIEVSLPQTKLSIPAYYVLASAEAGTNLSRYDGVRYGHRAAQFA
                     DLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLRRLVADDFQTAFAR
                     CDLILAPTAPTAAPKIGADASPVETYLSDIYTIAVNLAGLPALTLPAGFSGGGLPVGV
                     QLVGNYFAEAKILGAAHQIQLNSDWHGKRPE"
     gene            4618..5550
                     /locus_tag="WHR07_001267"
     CDS             4618..5550
                     /locus_tag="WHR07_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK/YbjX family protein"
                     /protein_id="HEZ2130480.1"
                     /translation="MKQNRTFTFPDFRTVYSYAPLYRLQHLKYTLRKFFGKKEIYAFE
                     QFVNASPIRQGLFLHCPQNAYPLLREFVDRRFNCKRRLDAMTADFLMAEKLFGTDILH
                     QMEDYRFHLVLAHLSDGISLWLNRNDNCVEEGAWSLSLRDEAGNRLYMATFAFVGTHL
                     LTASVQGPAGEEAKDTVRRITKQLHGLRPQQLMVTALQYFAAVLGLDGAMGIAQKHQV
                     KLRWKLKKRVKMNYDAFWQEYGASLERDGYWHLPQTPARKDLTDIESKKRSMYRKRYE
                     MLDNMVAEMKDGLKTEARGISDGIQTEKPLRRTA"
     gene            5593..7023
                     /gene="gatB"
                     /locus_tag="WHR07_001268"
     CDS             5593..7023
                     /gene="gatB"
                     /locus_tag="WHR07_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEZ2130481.1"
                     /translation="MTWETVIGLEIHVQLNTKSKIFSGASTAFGAEPNAHASVVECAL
                     PGVLPVMNREVVEKAIKLGLALDAKINRKNVFDRKNYFYPDLPKGYQISQLDLPIVEH
                     GKLEIVVGDDVKTINVTRAHMEEDAGKSVHEGLNGATGIDLNRAGTPLLEVVSEPELR
                     SAAEAVAYAKALHSLVTWLDICDGNMAEGSFRVDANVSVRPKGQAEFGTRREIKNLNS
                     FRFLEQAINYEAEAQIEILEDGSKVQQATMLFDPEKGETRVMRLKEDAQDYRYFPDPD
                     LLPVIISDAQMQKAKAEMPELPKEMAARFVADYGVSEYDARLLTASRAQAAYFEEAAK
                     ASGQGKPTANWMNGELAAALNKAGLELADSPITAPRLAALVGKIADGTLSSKLAKKAF
                     EAMWAEPESTIAEIIEKHGLQQMTDTGAVEAMVDEVLANNAKAVEQFKSGNEKALNAI
                     VGQVMKASKGKANPAQVQELIKAKLA"
     gene            7115..8125
                     /locus_tag="WHR07_001269"
     CDS             7115..8125
                     /locus_tag="WHR07_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster binding
                     domain-containing protein"
                     /protein_id="HEZ2130482.1"
                     /translation="MNHTVTLPDQTTFAAGDGETVLAAAARQNLNLPHSCKSGVCGQC
                     KAELVSGDIQIGGHSEQALSEAEKAQGKILMCCTTAQSDISLNIPGYKADALPVRTLP
                     ARIESMVFKHDVALLKLALPKAPPFAFYAGQYIDLLLPGNVSRSYSIANSPDQEGILE
                     LHIRRRENGVCSEMIFGSEPKVKEKGIVRVKGPLGSFTLQEDSGKPVILLATGTGYAP
                     IRSILLDLIRQDSGRAVHFYWGARHQDDLYALEEAQGLACRLKNACFTPVLSRPGEGW
                     QGRKGHVQDIAAQDHPDLSEYEVFACGSPAMTEQAKNLFVQQHKLPENLFFSDAFTPS
                     AS"
     gene            complement(8254..8886)
                     /gene="pdxH"
                     /locus_tag="WHR07_001270"
     CDS             complement(8254..8886)
                     /gene="pdxH"
                     /locus_tag="WHR07_001270"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HEZ2130483.1"
                     /translation="MDLHNIREDYSKRELSEGDCADNPIEQFERWLDEAVRAQVNEPT
                     AVNVAAVDGRGRPNSRMVLLKEVNSEGFVFFTNYHSRKGRSLDAHPFAAMTFFWPELE
                     RQVRVEGRVERLAEKLSDEYFESRPYQSRLGAWASAQSEVIPNKAVLVAKAAAVGLKH
                     PLHVPRPPHWGGYIVIPDLIEFWQGRPSRLHDRIQYRLLDGGWIRERLSP"
BASE COUNT         2278 a         2744 c         2171 g         1729 t
ORIGIN      
        1 tctgcggctt cgtcgccttg tcctgatttt tgttaatcca ctatattttt gggaatctgt
       61 tttaccccaa tatataaagc accatattaa ggcggagttt cttccccact ttgaaccgaa
      121 cccggaaaag acaccgccca agccaatcct gatgctgccc cggcagccaa ccatcaagga
      181 aaccctaatg aactttgctt tatccgtcat cacatttacc ctcgcctctt tcctgcccgt
      241 cccgcccgcc gaagccgccg tctttacttg gaaggacggc ggcggcaaca gctattcgga
      301 tgtgccgaaa cagcttcatc ccgaccagag ccaaatcctc aacctgcgga cgcgccaaac
      361 caaaccggcg gtcaaacccg cccaagccga cgcagggaag cgcacagacg gcgcggcaca
      421 ggaaaacaat cccgacactg ccgagaaaaa ccggcagctt gaggaagaaa agaaaagaat
      481 tgccgaaacc gaacggcaga acaaagaaga aaactgccgg atttcaaaaa tgaacctgaa
      541 agcggtggga aattcaaatg caaaaaacaa ggatgatttg attcggaaat acaataacgc
      601 cgtaaacaaa tactgccgtt aatcggctct agcgcaaacc ccatgccgtc tgaaacggca
      661 cggggtttgt ttatttctgc cagtaggttt tgacgttgac gaactcgtac agcccgaatt
      721 cggacaattc gcgcccgtaa ccggaatctt tgactccgcc gaaaggcagg cgcaaatcgc
      781 tgctggtatg gcggttgata aacaccgatc ccgcctgtat tttttcggca aaccgccaag
      841 cgcgttcggt atcggcggta taaatgcagg cacctagccc gaacggggaa tcattggcaa
      901 gggcgatggc atgttcttcg ttttcggcgc gcaaaatcag ggcggccggc ccgaatactt
      961 cttctctcca gacgcggcag gcaggattta ccctgtctaa aaccgtcgcg ggataaaacc
     1021 agcctcgccc ttgtgggatt tttccgccgg tcaggcatac cgcgccgttt gaaacggcat
     1081 cttcaacctg cccgtgaacc ctgtcccgca aatcttcgcg gtgcagcggt gcaagcgtag
     1141 tatcgggatg tttggggtcg cccattttca atttggcgca ttcggcaaga aacagcgtga
     1201 taaaacgatc ggctgcggct tcggttacga tgatgcgttt ggcggcgttg cacgattgcc
     1261 ccgcatcgcg gaaacgggaa taacaggctt ctgcggcggc gcgttccaaa tcggcatcgg
     1321 gcatcacgat aaaggcgttg ctgccgccga gttccaagac ggttttcttg aggtttgcgc
     1381 ccgcatgtgc cgcaaggatg cgccccgtat gcgtcgagcc ggtaaacgcc atcgcatcgg
     1441 tatcttcaac cgccttgagc gtgcccgcct catccaacca cgcgcctgcc aaaggaatgc
     1501 cgtctgaaac caaatcaaac aacgcctgac tgacgcgtgc cacgctgggc gcgggtttga
     1561 cggcgcacgc gttgcccgcg cacatagcgg gaacggcgaa acgcaatacc tgccagacgg
     1621 gatagttcca aggcatgacg gcaaacacca cgcccaaagg ctcaaacctt acctgactca
     1681 aactcgcctg cgtcgcgatg gttttgtggg cgagcagttc gggagcgagg cgggcgtaat
     1741 agcgtatcag ttcgatagac ttgccgattt ccgcacggca ttcgtgcagg cagcgtccga
     1801 cttcttcgca caccatttcc gcaaaacgct ctttctccgc ctccaaacgg tcggcaaatt
     1861 tttgcagacg cgcggcacgt tcggttacgc ccagttgcgc gaacgccccg ccgcgcattt
     1921 tcaaatccgc cagccgccgt tcaaactccg cataatcttg agctggacgg cggtaaagcg
     1981 tttcgcccgt aaatacattg acactgtgaa acatcgaatc aacctgccag ttgcgggaat
     2041 atcgttttca gtcccgacac aataatctcc accgataccg ccgccagcat catacccatg
     2101 atacggttta aaatcgtcag ccccgtcgcg cccagcaggc ggctgacctt ccctgcaaca
     2161 attaaaatgg cataacaaat cgcactgacc accaaaccgg ccacgataat cagcgcgatg
     2221 tcgctgtacg ttttggctgc cgaagcgtaa ataatcacgg tcgaaatacc gcccgggccg
     2281 atggtgatcg gtatggcgat gggcacgacg gcaatcgctc cggcattgcg ggcggggcgc
     2341 gcctgccccg tttccggctg cgcgccgaga ttctgcttgg cgggattgtc gttgccgttc
     2401 atcatcgaaa tggcgatcag cagcaccaaa atcccgccgc cgacctgaaa cgaaccgacg
     2461 ctgatgccca aaaccttcag cagcgtaccg ccgatcagcg caaataccgc aatcacggca
     2521 aacacggcaa cggcggccgt ccgcgcgacc ttcctgcgct ccttcgtgct gtgcccgttg
     2581 gtcaggtcaa ggtaaagcga caacgcgcta aacggattaa tcagcaccaa aaaagccaca
     2641 atcagcttgc cgatttccat gcccaatccc attatttccc cctccttcaa acccgtgcgg
     2701 caggcatccg atgctgcaaa ttgccgccgc aacggatttt tccgttataa ttaaaaattc
     2761 aagcaatacg ccccatcata cccgaacgac ggtatcttta ccatcagaca aggatgcttt
     2821 tcatggcact gacacttgcc gacgtagaca aaatcgcccg actctcccga ctgcacctga
     2881 ctgcggcaga aaaagaaaaa tcgcttcaag aattaaacga cattttcgct atggtcgaac
     2941 agatgcaaac catcaacaca gacggcatcg aaccgatggc gcatccgcac gaggccgccc
     3001 tgcgcctgcg cgaagacgaa gtaaccgaaa ccgaccgcgc cgccgaatat caggcggttg
     3061 ctccggaagt acgcaaccgt ctgtatatcg taccgcaagt tatcgaagaa taatccgaat
     3121 atgcttcaga cggcatcagc aataccgccc gaagcccttt aaggatggaa gatttatgac
     3181 ccaatacaca ttgaaacagg caagcgtcct gttgcagtcc aaacagattt ccgccgtcga
     3241 actggcaagc gcataccttg ccgccatcgc cgaaaaaaat cccgccctca acggctacat
     3301 caccatcgac caagataaaa cccttgcaga agcccgtgcc gccgacgaac gtatcgcgca
     3361 gggcaacgcc tccgcgctta ccggcgtacc cgtcgcctac aaggatattt tctgccaaac
     3421 cggctggcgc agcgcgtgcg cttccaaaat gctcgacaac ttcatctccc cttacaccgc
     3481 caccgtcgtc caaaacctgc tcgacgaagg catggtaacg ctcggccgca ccaatatgga
     3541 tgagttcgct atgggttcga ccaatgaaaa ctcattctac ggcgcggcca aaaatccgtg
     3601 gaatccggaa cacgtccccg gcggttcgtc aggcggttcc gccgccgtcg ttgccgcgcg
     3661 ccttgcccct gccgcgctcg gttcggatac cggcggctct atccgccagc ctgcatcgca
     3721 ctgcggcatt accggcatca aacctaccta cggcacggtt tcccgcttcg gtatggtcgc
     3781 ctacgcctcc agcttcgacc aggccggccc gatggcgcaa actgccgaag actgcgcgat
     3841 tctgttgaat gcaataacag gtttcgaccc caaagactcc accagtctcg aacgtgaaaa
     3901 agaagactac acccgcgatt tgaaccaacc gctcaaaggc gtgaaaatcg gtctgcccaa
     3961 agaatatttc ggcgaaggca acagcgccga tgttctgacg gcattgcaaa acaccattga
     4021 tttgctgaaa gcccaaggcg cggaattgat tgaagtttcc ctgccgcaaa ccaagctgtc
     4081 catccccgcc tactacgtcc tcgcctccgc agaagccggc accaaccttt cacgttacga
     4141 cggcgtacgt tacggacacc gtgccgccca attcgccgat ttggaagaaa tgtacggcaa
     4201 aacccgcgcc gaaggtttcg gcagcgaagt caaacgccgc atcatgatcg gcacttatgt
     4261 actgtcgcac ggctactacg atgcctacta tctcaaagcc caaaaactgc gccgcctcgt
     4321 tgccgatgat tttcagacgg catttgcacg gtgcgacctc atcctcgcgc cgaccgcacc
     4381 cactgcagcc ccaaaaatag gagcggatgc ttcgccggtt gaaacctact tgagcgatat
     4441 ctacaccatc gccgtcaacc tcgccggact gcccgcattg accctgcccg caggcttcag
     4501 cggcggcgga ctgcccgtcg gcgttcagct tgtcggcaac tacttcgccg aagccaaaat
     4561 cctcggtgcg gcgcatcaaa tccaactcaa cagcgattgg cacggcaaac gacccgaatg
     4621 aagcagaacc gcacctttac cttccccgat tttcgcaccg tttacagcta tgcgccttta
     4681 tatcggctgc aacatttaaa atacacattg cgaaaatttt tcggaaaaaa agaaatttac
     4741 gccttcgagc agtttgtcaa cgcctcccct atccgtcagg ggctgttcct ccactgcccg
     4801 caaaatgcct atccgctgct gcgcgaattt gttgacaggc gttttaactg caaacgccgt
     4861 ttagatgcga tgacggcaga ttttctcatg gcggaaaaac tgttcggcac agacatcctg
     4921 caccaaatgg aagactaccg cttccatttg gtcttggcgc acctttcaga cggcatcagc
     4981 ttgtggctca accgcaacga caactgcgtc gaagaaggcg cgtggtcttt atctttgcgc
     5041 gacgaagcag gcaaccggct gtatatggcg actttcgcct ttgtcggcac acacctgctg
     5101 acagcctccg tacaagggcc tgcgggtgaa gaagccaaag acactgtccg ccgcataacc
     5161 aaacaacttc acggcttgcg tccccaacaa ctgatggtaa ccgcactgca atatttcgcc
     5221 gccgtactcg gcttggacgg cgcaatgggc attgcacaaa aacatcaggt caaactgcgc
     5281 tggaaactta aaaagcgcgt caaaatgaat tacgacgcat tctggcagga atacggcgca
     5341 agtttggaac gggacggcta ctggcatctc ccccaaaccc ccgcccgcaa agaccttacc
     5401 gacatcgaaa gcaaaaaacg ctcgatgtac cgcaagcgtt atgaaatgct ggacaacatg
     5461 gttgcagaga tgaaggacgg tctgaaaaca gaagcacgcg gcatttcaga cggcatccaa
     5521 acggaaaaac cgctccgccg gacagcctga cgcgaagact atcgaattga tattttagag
     5581 aaagaagctc ttatgacctg ggaaaccgta atcggcttgg aaatccacgt ccaattgaac
     5641 accaaatcca aaatcttcag cggcgcatcg accgcattcg gcgcagaacc caacgcgcac
     5701 gccagcgtag tggaatgcgc gctgccgggc gtactgccgg taatgaaccg agaagtcgtt
     5761 gaaaaagcca tcaaattagg cttggctttg gatgcgaaaa tcaaccggaa aaacgtgttc
     5821 gaccgtaaaa actacttcta tcccgactta ccaaaaggct atcaaatcag ccagttggat
     5881 ttgccgattg tcgaacacgg caaattggaa atcgtagtcg gcgacgatgt gaaaaccatc
     5941 aacgtaaccc gcgcccatat ggaagaagac gcgggcaagt ccgtgcatga aggcttgaac
     6001 ggcgcgaccg gtatcgacct gaatcgcgcc ggcacgcctt tattggaagt cgtatccgaa
     6061 ccggaattgc gctccgccgc cgaagccgtt gcctacgcca aagccttgca cagcttggta
     6121 acctggctgg acatttgcga cggcaatatg gcggaaggtt cgttccgcgt cgatgccaac
     6181 gtatccgttc gcccgaaagg tcaagcggaa ttcggcacgc gccgcgagat taaaaacctc
     6241 aattccttcc gtttcttgga gcaggcgatt aattacgaag cggaagcgca aatcgagatt
     6301 ttggaagacg gcagcaaagt gcagcaggcg acgatgctgt tcgacccaga aaaaggcgaa
     6361 acccgcgtaa tgcgcctgaa agaagacgcg caagactacc gctacttccc cgacccggat
     6421 ttgttgcccg tcatcatttc agacgctcaa atgcaaaaag ccaaagcaga aatgcccgag
     6481 ctgccgaaag aaatggcggc acgtttcgtg gcagattacg gcgtgtccga atacgacgcg
     6541 cgcctgctca ccgcaagccg cgcacaggcc gcctattttg aagaagccgc caaagcaagc
     6601 gggcaaggca agccgactgc caactggatg aacggcgaac tcgccgccgc gctgaacaaa
     6661 gccggcctgg aacttgccga cagcccgatt accgccccgc gcctcgccgc gctggtgggc
     6721 aaaatcgccg acggcacatt aagcagcaag ttagcgaaaa aagcctttga agccatgtgg
     6781 gcagaacccg aatccaccat tgccgaaatc attgaaaaac acggcttgca gcaaatgacc
     6841 gataccggcg cagttgaagc gatggtggac gaagtgctgg caaacaacgc caaagccgtg
     6901 gaacagttta aatccggcaa cgaaaaagcc ctgaatgcga ttgtgggaca agtgatgaaa
     6961 gccagcaaag gcaaagccaa ccccgcgcaa gttcaagaac tgattaaagc caaacttgcc
     7021 tgataagcaa gatgccgtct gaaacccaga tccgacgttc agacggcgtt ttcacagtct
     7081 gaccacatta aaacagcata aaaaacaata ttccatgaac cacaccgtta ccctgcccga
     7141 ccaaaccacc tttgccgccg gcgacggtga aaccgttttg gccgctgccg cccgtcaaaa
     7201 cctcaatctg ccccattcct gcaaaagcgg tgtctgcggg caatgcaaag ccgaactggt
     7261 cagcggcgat attcaaatag gcggacactc ggaacaggct ttatccgaag cagaaaaagc
     7321 gcaaggcaag attttgatgt gctgcaccac tgcgcaaagc gacatcagcc tcaacatccc
     7381 cggctacaaa gccgatgccc tacccgtccg caccctgccc gcacgcatcg aaagtatggt
     7441 tttcaaacac gatgtcgccc tcttgaaact tgccctgccc aaagcccctc cgtttgcctt
     7501 ctatgctggg caatacatcg atttactgct gccgggcaac gtcagccgca gctactccat
     7561 cgccaattcg cccgaccaag aaggcatttt ggaactacac atccgcaggc gcgaaaacgg
     7621 tgtctgctcg gaaatgattt tcggcagcga acccaaagtc aaagaaaaag gcatcgtccg
     7681 cgttaaaggc ccgctcggtt cgtttaccct gcaggaagac agcggcaaac ccgtcatcct
     7741 gctggcaacc ggcacaggct acgcccccat ccgcagcatc ctgctcgacc ttatccgcca
     7801 agacagcggc cgcgccgtcc atttctactg gggcgcgcgt catcaagatg atttgtatgc
     7861 cctcgaagaa gcacaagggt tggcatgccg tctgaaaaac gcctgcttca cccccgtatt
     7921 gtcccgcccc ggagagggct ggcagggaag aaaagggcac gtacaagaca tcgcggcaca
     7981 agaccacccc gacctgtcgg aatacgaagt atttgcctgc ggctctccgg ccatgaccga
     8041 acaagcaaaa aatctgtttg tgcaacagca taagctgccg gaaaacttgt ttttctccga
     8101 cgcattcacg ccgtccgcat cataattccc cggtataaaa aagattcagg ctttccgttc
     8161 ggaacacaaa aaacttcccg tccgtatttt ccccataaaa aatgccgtct gaagcccgat
     8221 tccggttttc agacggcata tgttttttcc tgttcaaggc gacagccgct cgcgtatcca
     8281 gccaccatcc agcaaacggt attggatgcg gtcgtgcagc ctgctcggcc tgccctgcca
     8341 aaactcaatc aaatcgggaa tcacaatata gccgccccaa tgcggcggac gcggcacgtg
     8401 caaaggatgt ttgagtccga ccgccgccgc ctttgccacc aataccgcct tgttcggaat
     8461 cacctcgctc tgcgcacttg cccacgcacc caaacggctc tgatacgggc ggctctcaaa
     8521 atattcgtcc gacaacttct ccgccagcct ttcaacacgc ccttccacgc gcacctgacg
     8581 ctccagctcc ggccaaaaaa acgtcatcgc cgcaaatgga tgagcatcca gcgaacgccc
     8641 cttgcggctg tgataattcg taaagaaaac aaaaccttca gaattaactt ccttcagcag
     8701 caccatacgg ctgttaggcc tgccgcgtcc gtcgaccgcc gccacattga ccgccgtcgg
     8761 ctcgttgacc tgtgcgcgta ccgcctcgtc caaccaccgc tcgaactgct cgatcggatt
     8821 gtcggcgcaa tcgccttccg acaattcccg tttgctgtaa tcttcccgaa tattgtgcaa
     8881 atccatttac cgctcctctt aatagtggat taacaaaaac ca
//
LOCUS       DAWGKF010000079         8824 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.079, whole genome shotgun sequence.
ACCESSION   DAWGKF010000079 DAWGKF010000000
VERSION     DAWGKF010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8824)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8824)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8824
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.079"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            179..1354
                     /locus_tag="WHR07_001271"
     CDS             179..1354
                     /locus_tag="WHR07_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEZ2130484.1"
                     /translation="MQNIFDPLVIRGKSLTPIVQGGMGVGVSASGLSSAVARENGIGT
                     IASVDLRHLHEDLLAESQINPSEEKYTSLNCTALDREIQKAKSASEGKGLIAVNVMKA
                     VKDHAAYVRQACESGADAVVMGAGLPLDLPEMTEGYHKDVALLPILSESRGINIVLKR
                     WMKKGILPDAIVVEHPAHAAGHLGASTVEGVNDAKFDFKRVIEETFEVFKSLGLESEK
                     IPLILAGGMANFEKVKTALKNWGASAVQIGTAFAVTEEGDAHLNFKKTLAGAETEKVV
                     EFMSVAGLPARGVRTKFLDSYIKRESKLQTNAKADPRRCTQGLNCLTSCGLRDGLSKA
                     GQFCIDIQLAAAFRGEVDKGLFFRGKDPLPFGNAIRTVRETIQYLLTGSEPVATLGR"
     gene            complement(1565..2113)
                     /locus_tag="WHR07_001272"
     CDS             complement(1565..2113)
                     /locus_tag="WHR07_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HEZ2130485.1"
                     /translation="MSQNTPIKPWYKHVWPWILMAGPIFVVIASVAMFFVAQQHATDL
                     VTDDYYKDGKHIDIQLHRDEEAVRRHIGVQVLISPDMNAAKVFVGGEFDGKQPLNLLL
                     MHPTRKADDQTVALKPVGSAQNGRAEYEAVFKTLSPTNHWYVRVEDAAGVWRVENKWI
                     TSQGNAVDLTPMDKLFNNTESK"
     gene            complement(2116..3612)
                     /gene="ccoG"
                     /locus_tag="WHR07_001273"
     CDS             complement(2116..3612)
                     /gene="ccoG"
                     /locus_tag="WHR07_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HEZ2130486.1"
                     /translation="MTTENQAGSPASGIGTSEQTKAAPKAKKTFDPRASVIQIHPEGE
                     RIHPKKAEGRFAKLRIAAVLATQFVFYVIPWFNWSGRQAVVFNIPERHFFIFGLSLGV
                     GDLIYLALLLMICAFGLFWWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLK
                     LEKSPWNFTKIRIKATKYLLIFLVCAWTGITFAGWFVPIRQFVPDLFTGAAGGGAMFA
                     AAFYGFMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDAERGEPRGARKKTV
                     NKEEAGLGDCINCAMCVQVCPVGIDIRNGLQYQCIGCAACIDACDEIMDKMGYPRGLI
                     RYTTESALEHEYSEKDIKKRLLRPRVAGYGAVLALVIIAFLAGLSTRKMVEVDILKDR
                     GVLVRENAKGWLENAYSLRIINKSEKEQLITASVKGFDEIALTGLPEGGIKVAPRETV
                     TLPVQVSTIPEYADKGSHPIEFTFQYRESGAPDGKPVVLEEDATFIGE"
     gene            4140..6119
                     /gene="tkt"
                     /locus_tag="WHR07_001274"
     CDS             4140..6119
                     /gene="tkt"
                     /locus_tag="WHR07_001274"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEZ2130487.1"
                     /translation="MSQLANAIRFLSADAVQKANSGHPGAPMGMAEMAETLWTKFLNH
                     NPANPKFYNRDRFVLSNGHASMLLYSLLHLTGYNLSIEDLKNFRQLHSKTPGHPEYGY
                     TDGVETTTGPLGQGIANAVGMALAEKILAAEFNKDGLNIVDHYTYVFMGDGCLMEGVS
                     HEACSLAGTLGLGKLIVLYDDNNISIDGKVDGWFTENIPQRFESYGWHVVPNVNGHDT
                     AAIQAAIEAARAETGKPSIICCKTLIGKGSANKEGSHKTHGAPLGADEIEATRKHLGW
                     TYPAFEIPQEIYDAWNAKEKGAKLEAEWDKLFAQYQAKYPAEAAEFVRRMDKKLPENF
                     DGYVQTALKEVCAKAETVATRKASQNSIEILAKELPELVGGSADLTPSNLTDWSNSVS
                     VTRDKGGNYIHYGVREFGMGAIINGLVLHGGVKPFGATFLMFSEYERNALRMAALMKI
                     NPVFVFTHDSIGLGEDGPTHQPIEQTATLRLIPNMDVWRPCDTAESLVAWAEAVKAAD
                     HPSCLIFSRQNLKFQARSEQQLNDIKRGGYVISEAQGNAQAVIIATGSEVELALEAQK
                     ALAAQNIAVRVVSMPSTNVFDRQDTAYQAAVLPEGLPRIAVEAGHADGWYKYVGLNGA
                     VVGINRFGESAPADLLFKEFGFTVDNVVDTVKSVL"
     gene            6267..7655
                     /gene="fumC"
                     /locus_tag="WHR07_001275"
     CDS             6267..7655
                     /gene="fumC"
                     /locus_tag="WHR07_001275"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HEZ2130488.1"
                     /translation="MNTRTEHDTMGNVEVPSEAYWGAQTQRSRNNFKIGGETLPQPLI
                     YALALVKKAAAATNVSLGRIKPEQADLITQAADDVLNGRLDGQFPLVVWQTGSGTQSN
                     MNMNEVLANRANEIAGTGLAAYQPVHPNDHVNHAQSTNDAFPTAIHVAAAIEINRHLI
                     PAVKALRDTLDKKAQAFAPIVKIGRTHLQDATPLTLGQEFSGYVSQLDHGLGRLNDAL
                     KDLYKLALGGTAVGTGLNSHPEYAEKAAAKLAELSGLPFVSAPNKFEALGGRDAAVAA
                     SGALKTLAASLNKIANDIRWLASGPRCGLGEIKIPENEPGSSIMPGKVNPTQCEAMTM
                     VCCQVFGNDVTIGMAGASGNFELNVYMPVIAYNLLQSIRLLGDACNSFNEHCAVGIEP
                     VPEKIDYFLHHSLMLVTALNRKIGYENAAKVAKTAYKNNKSLRETAVELGLLTGEEFD
                     ELVVPADMVHPR"
     gene            complement(7720..8643)
                     /locus_tag="WHR07_001276"
     CDS             complement(7720..8643)
                     /locus_tag="WHR07_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ2130489.1"
                     /translation="MENQRPLLGFALALLAAMTWGTLPIAVRQVLKFVDAPTLVWVRF
                     TVAAAVLFVLLALGGRLPKWRDFSWCSFRLLLLGVAGISANFVLIAQGLHYISPTTTQ
                     VLWQISPFTMIVVGVLVFKDRMTAAQKIGLVLLLAGLLMFFNDKFGELSGLGAYAKGV
                     LLCAAGSMAWVCYAVAQKLLSAQFGPQQILLLIYAASAAVFLPFAKPAHIGSLDGTLA
                     WVCFAYCCLNTLIGYGSFGEALKHWEASKVSAVTTLLPVFTVIFSLLGHYVMPDTFAA
                     PDMNGLGYVGALVVVGGAVTAAVGDRLFKRR"
BASE COUNT         2231 a         2537 c         2160 g         1896 t
ORIGIN      
        1 cactataata ttttctctcc cgattgaaac aggcgtaaca gaatatgccc gaagctccgg
       61 ctgctttctt gtttaccgcc gcgatattta gagtataata ccaaatttga gcaatagttc
      121 taaaacagtt agaaccattt ttcatgagcc tgactgattc gtacactcgg agaaactgat
      181 gcagaatatt tttgaccctt tggttattcg tggaaaatcc cttaccccca tcgtgcaagg
      241 cggtatgggg gtcggtgttt ccgcatcggg tttatccagc gcggtggcgc gtgaaaacgg
      301 tatcggaacg attgccagtg tggatttgcg ccaccttcac gaagacctac tcgccgaatc
      361 acaaatcaat ccgagtgaag agaaatatac atctttgaac tgtaccgcat tagacaggga
      421 aatccaaaaa gccaaaagcg cttcagaggg aaaaggactg attgcggtca acgtgatgaa
      481 ggcggtcaaa gaccacgccg cgtatgtccg ccaggcttgc gaatcagggg cggatgcggt
      541 tgtaatgggt gccggcctgc ctttagacct gccggaaatg accgagggct atcataaaga
      601 tgtcgcgctg ctgccgattc tgtccgaatc gcgcggtatt aatatcgtct tgaaacgttg
      661 gatgaaaaaa ggcatattgc ccgatgcgat tgtagtcgaa catcctgccc acgcggccgg
      721 acatttgggt gcatcaaccg ttgaaggcgt aaacgatgcc aagttcgact tcaaacgcgt
      781 gattgaggaa acgtttgaag ttttcaaaag tttagggctg gaaagcgaaa aaatcccgct
      841 tattcttgcg ggaggcatgg caaattttga aaaagtcaaa accgccctaa agaactgggg
      901 agcatccgcc gttcaaatcg gtacggcttt tgccgttacc gaagaaggag atgcacacct
      961 taacttcaaa aaaacgctcg ccggtgcgga aactgaaaaa gtagtcgaat ttatgtctgt
     1021 tgccggtttg ccggcgcgcg gtgtccgcac caaattccta gacagctaca tcaagcgtga
     1081 aagcaaactt cagacaaacg ccaaagccga cccgcgccgc tgtacccaag gtttaaactg
     1141 cctaaccagt tgcggtctgc gcgacgggct ttccaaagca ggacagttct gtattgatat
     1201 ccagcttgcc gccgcattcc gtggagaagt agataaaggc ctgttcttca gaggtaaaga
     1261 cccgctgccc ttcggcaatg ccatccgcac cgtccgcgag acgatacaat atctgctgac
     1321 ggggagcgaa cctgttgcaa cgctcggacg ctgacatcag gtaggatttg atttgcaaac
     1381 aaaatgccgt ctgaagggct ttcagacggc gtttttcagg ctgcgttccg gaatagtgtt
     1441 aaaaaataaa cgggatgaga tacatttatt ttcgtccgac aaatcaaacc atcgcgccga
     1501 atgatcaaat aatgcctgca cggcattaca tctggcaaag caatgcaatg aaaacacggc
     1561 ttttttattt gctttcagta ttattgaaaa gcttgtccat cggggtcaaa tcgaccgcat
     1621 tgccttggct ggtaatccat ttgttctcga cgcgccacac gcctgccgcg tcctccacgc
     1681 gcacatacca gtggttggtc ggcgaaaggg ttttgaacac cgcctcatat tccgccctgc
     1741 cgttctgcgc gctgccgacg ggcttgaggg cgacggtttg atcgtccgcc ttgcgggtcg
     1801 ggtgcatcag cagcaggttc aaaggctgtt tgccgtcaaa ctcgccgccg acaaacactt
     1861 ttgccgcatt catatcgggg gaaatgagaa cctgcacccc gatatgccgt ctgacggctt
     1921 cttcatcccg atgaagctgg atgtcgatat gtttgccgtc tttataataa tcgtccgtaa
     1981 ccaaatctgt cgcgtgctgc tgcgcgacaa aaaacatagc gacgctggcg atgacgacaa
     2041 aaatcggccc cgccatcaag atccacggcc agacgtgttt gtaccaaggt ttgattggag
     2101 tgttttgaga cacggttatt ctccgataaa ggttgcatct tcttccaaga cgaccggctt
     2161 gccgtcgggc gcgccgcttt cgcggtattg gaaggtaaat tcgatagggt ggctgccttt
     2221 gtccgcgtat tccggaatgg tggacacttg gacgggaagg gttaccgttt cgcgcggggc
     2281 aaccttgata ccgccttcgg gcagcccggt cagggcgatt tcgtcaaagc ctttgacact
     2341 tgcggtaatg agctgttctt tttcactttt gttgatgata cgcaggctgt atgcgttttc
     2401 cagccagcct ttggcgtttt cgcgcaccag tacgccacgg tctttcaaaa tatcgacctc
     2461 gaccattttg cgcgtggaca aaccggccag gaaggcaatg ataactaacg ccaacaccgc
     2521 gccgtaacct gccacgcgcg gtctgagcag ccgtttttta atgtcttttt cagaatattc
     2581 gtgttccagc gcgctttcgg tcgtataacg gattaatccg cgcggatagc ccattttgtc
     2641 cataatctca tcgcacgcgt cgatacaggc ggcgcagccg atacattggt attgcagacc
     2701 gttgcggatg tcgatgccga cggggcagac ttggacgcac atcgcacagt tgatgcagtc
     2761 gcccaaaccc gcctcttcct tattgaccgt tttcttgcgc gcgccgcgcg gttcgccgcg
     2821 ttccgcgtca taagaaacaa tcagcgtgtc cttgtcgaac atcgcgcttt ggaaacgtgc
     2881 atacggacac atatgcaggc atactttttc acgcataatg tgggcgaaga agaaggtcat
     2941 aaagccataa aacgctgcgg caaacatcgc gccgccacct gctgctccag tgaataaatc
     3001 gggaacgaac tggcggatag ggacaaacca gcctgcaaac gtgatgcccg tccacgcgca
     3061 gacaaggaaa atcagcaggt atttggtggc tttgatgcgg attttagtga aattccacgg
     3121 cgatttttcc agtttcagcc gtttgtttct atcgccttcg accaggttgt caatccacag
     3181 cataatttcg gtgtaaaccg tttgcgggca ggaatagccg caccacagtc gccctgcaat
     3241 cgtcgtccac caaaacagcc cgaaggcgca aatcatcagc agcaaggcaa ggtaaatcaa
     3301 atcgcccacc cccaacgaca atccgaaaat gaagaaatgc cgttcgggga tattgaaaac
     3361 gacggcctgc ctgccgctcc agttgaacca cggaatgacg taaaacacaa actgcgtcgc
     3421 caatacggcg gcgatacgca gtttggcgaa ccgtccttcc gcctttttgg gatggatgcg
     3481 ttcgccttcg ggatggattt gaatcacgct ggctcgcgga tcgaatgttt tttttgcttt
     3541 cggcgcggct tttgtttgtt cggacgtgcc gattccggat gccggactgc cggcttggtt
     3601 ttccgtggtc attctgcatt ccttagattt ttgattgatg gtttgcccgt taccgccgcc
     3661 gtttgctttt cagacgtcat ttttcttgtt ttttaaggcg ttgtgtttca agttttgaga
     3721 aaatccgttt ttcccaaaat atatttccgc tattgtacaa ctttatgcgc cgtccggatg
     3781 tatggggcgg atacatttcc catccgcatc aaaacgcctg gattttacct taccgcccga
     3841 acaaaatccg aatacggtta aaaaaaaaga ctaaaaaaac cgacaccccc atatcggcag
     3901 aaccgacggc gcaagctcat aaacaaacgc tatcgacaat ccggcacaca atctataact
     3961 ttttatttca aaaggaataa tggcaggctt cgcccgcaaa tcgaaaatcc ttccccgcct
     4021 gtcccctgcc gccgccttcc cacgcgtccg cccttttctt gaaagcataa gcgaatcggg
     4081 cgataatcaa cgctttccga ttatccactt atctgaaaca ccagcaagga aaatacaaaa
     4141 tgtctcaact ggcaaacgca atccgcttcc tctcggccga tgccgttcaa aaagccaatt
     4201 ccggccaccc cggcgcgcct atgggtatgg cggaaatggc ggaaacattg tggacgaaat
     4261 tcctcaatca caaccccgcc aaccccaaat tctacaaccg cgaccgcttc gtcctctcca
     4321 acggccacgc gtctatgctg ttgtacagcc tgctgcacct gaccggctac aacctaagca
     4381 ttgaagactt gaaaaacttc cgccaactgc acagcaaaac ccccggccat cccgaatacg
     4441 gctacaccga cggcgtggaa accacgaccg gcccgttggg gcaagggatt gccaacgcgg
     4501 tgggtatggc attggcagaa aaaatccttg ccgccgaatt taataaagac ggtttgaaca
     4561 tcgtcgatca ttacacctac gtctttatgg gcgacggctg tctgatggaa ggcgtatcgc
     4621 acgaagcctg ttcgctcgcc ggcaccttgg gcttgggcaa actgattgtt ttatatgatg
     4681 acaacaatat ttccattgat ggtaaagtgg acggctggtt taccgaaaac atcccgcaac
     4741 gctttgaaag ctacggctgg cacgtcgttc ctaacgtaaa tggtcatgac accgccgcca
     4801 ttcaagccgc catcgaagcc gcacgtgccg aaaccggcaa accgtccatc atctgctgta
     4861 aaaccttaat cggcaaaggc agtgccaata aagaaggcag ccacaaaacc cacggcgcac
     4921 ctttgggtgc ggacgaaatc gaagccacgc gcaaacattt gggctggact taccctgcct
     4981 ttgaaatccc gcaagaaatt tacgatgcgt ggaatgccaa agaaaaaggc gcgaaactgg
     5041 aagccgaatg ggacaaactg ttcgcgcaat accaagccaa atatcctgcc gaagccgcag
     5101 aatttgtgcg ccgtatggat aaaaaactgc cggaaaactt tgacgggtac gttcagacgg
     5161 cattgaaaga agtgtgcgcc aaagccgaaa ccgtcgccac ccgcaaagcc agccaaaaca
     5221 gcatcgaaat cttggcaaaa gagctgcccg aactggtggg cggctctgcc gacctgaccc
     5281 cgtccaatct gaccgactgg tcaaacagcg tctccgttac ccgcgacaaa ggcggcaact
     5341 acatccacta cggcgtgcgc gagttcggca tgggtgcgat tataaacggc ttggtattgc
     5401 acggcggcgt gaaacccttt ggcgcgacct tcctgatgtt cagcgaatac gagcgcaacg
     5461 ccctgcgtat ggcggcactg atgaaaatca accccgtgtt cgtgttcacc cacgattcca
     5521 tcggtttggg cgaagacggc ccaacccacc agccgattga gcaaaccgcc accctgcgcc
     5581 tgattccgaa tatggacgta tggcggccgt gcgacaccgc cgaatccttg gtcgcttggg
     5641 cagaagccgt caaagccgcc gatcacccgt cctgcctgat tttcagccgt caaaacctga
     5701 aattccaagc gcgcagcgaa caacaactga acgacatcaa acgcggcggc tacgtcatca
     5761 gcgaagccca aggcaacgcc caagccgtca tcattgccac cggttccgaa gtcgagctgg
     5821 ctttggaagc gcaaaaagca ctcgccgcgc aaaacatcgc cgtgcgcgtc gtttccatgc
     5881 cgtccaccaa cgtattcgac cgccaagaca ccgcctatca agccgccgtc ctgcccgaag
     5941 gcctgccgcg cattgccgta gaagccggac acgccgacgg ctggtacaaa tacgtcggcc
     6001 tgaacggcgc agtcgtcggc atcaaccgct tcggcgaatc cgcccctgcc gatctgctgt
     6061 tcaaagaatt cggctttacc gtggacaatg tggtcgatac agtgaaatca gtgctgtaac
     6121 cccacaccta aacaaatgcc gtctgaaacc aattagggct tcagacggca tttgtttgcc
     6181 ctctctcctt gatacttcct cattcctcca atctccatta taatatttgc gaatcactct
     6241 tattcacatt tcaaaaggag aaacgtatga acacccgcac cgaacacgac accatgggca
     6301 atgtcgaagt cccgtccgaa gcctattggg gcgcgcagac ccagcgcagc cgcaacaatt
     6361 tcaaaatcgg cggcgaaacc ctgccgcagc cgctgattta tgctttggcg ctggtgaaaa
     6421 aagccgctgc cgcgaccaat gtttccctcg gcaggattaa gccggaacag gcggatttga
     6481 ttacgcaggc ggcggatgat gtgttgaacg gcaggcttga cggacagttt cctttagtgg
     6541 tttggcagac cggctccggc acgcagtcca atatgaacat gaacgaagtg ctggcgaacc
     6601 gcgccaacga aatcgccggt acgggtttgg cggcgtatca gcccgtccat cccaacgacc
     6661 atgtgaacca cgcgcaatcg accaacgacg cattcccgac cgccatccac gttgccgccg
     6721 cgattgaaat caaccgccac ctcatccccg ccgtaaaagc cctgcgcgac accttggaca
     6781 aaaaagccca agccttcgcc cccatcgtca aaatcggccg cacccacttg caggacgcga
     6841 cgccgctgac tttaggccaa gaattttccg gctacgtttc ccagctcgac cacggcttag
     6901 gccgtctgaa tgacgcgctt aaagacttgt ataaacttgc tttgggcggt acggcggtcg
     6961 gcacgggttt gaacagccat cccgaatacg ccgaaaaagc cgccgccaaa ctcgccgaat
     7021 tgtccggctt gccgtttgtc agcgcgccga acaaatttga agccttgggc ggacgcgatg
     7081 ccgccgttgc cgcttcgggc gcattgaaaa cgctggcggc aagcctgaat aaaatcgcca
     7141 acgacatccg ctggctggca agcggcccgc gctgcggttt gggcgaaatc aaaatccccg
     7201 aaaacgagcc gggttcgtcc atcatgccgg gcaaagtcaa cccgacccaa tgcgaagcga
     7261 tgaccatggt gtgctgccaa gtgttcggca acgacgttac catcggcatg gcgggcgcgt
     7321 cgggcaattt cgagctgaac gtctatatgc ccgttatcgc ctacaacctc ttgcaatcca
     7381 tccgcctgtt gggcgacgcg tgcaacagct tcaacgaaca ctgcgccgtc ggcatcgaac
     7441 ccgtaccgga aaaaatcgac tatttcctgc accattccct gatgctggtt actgcgttaa
     7501 accgtaaaat cggctacgaa aacgccgcca aagtcgccaa aaccgcctac aaaaacaaca
     7561 aatcgttgcg cgaaaccgcc gttgagttgg gcttgctgac gggcgaagaa tttgacgaac
     7621 tggtcgttcc tgccgatatg gttcatccgc gctaatcttt ccctcaaata aaatgccgtc
     7681 tgaaacctcg ttcagacggc attttccgtt gcctgcgaac tagcggcgtt tgaacagcct
     7741 gtcccccacc gccgccgtaa ccgcaccccc gaccacgacc agtgcgccaa cataacccaa
     7801 accgttcata tccggcgcgg caaaagtatc aggcatcaca taatgcccga gcaaagaaaa
     7861 tattacggta aacacgggga gcaaggttgt taccgcgctg actttggaag cctcccaatg
     7921 tttcaacgcc tcgccgaacg agccgtaacc gattaacgta ttcaagcagc aatacgcaaa
     7981 acaaacccac gccaacgtac cgtccaaact tccgatgtgt gccggtttgg caaacggcag
     8041 gaacacggcg gcacttgccg cataaatcaa cagcagaatc tgttgcggtc cgaattgcgc
     8101 cgacagcagc ttttgcgcca cggcataaca cacccatgcc atactgcctg ccgcacacag
     8161 caacacgccc ttcgcatacg cgcccaaacc cgacaactcg ccgaatttat cgttaaaaaa
     8221 cataagcaaa ccggcaagca gcaaaaccaa gccgattttc tgagcggcag tcatccggtc
     8281 tttaaacacc aacacaccga caacaatcat cgtaaacggc gaaatctgcc acaaaacctg
     8341 cgtcgtggtc ggcgaaatat aatgcagccc ttgggcaatc agcacaaagt ttgccgaaat
     8401 gcccgccacg ccgagcagca gcagcctgaa tgagcaccaa gaaaaatccc gccacttcgg
     8461 cagccgcccg cccaatgcca gcaaaacaaa caataccgcc gccgccacgg taaaacgcac
     8521 ccacaccagc gtcggcgcat cgacaaactt caatacctgc cgcacggcaa tcggcagcgt
     8581 tccccacgtc atcgccgcca aaagtgccaa cgcgaagcct aggagcggcc tttggttttc
     8641 catcctgatt ttcctatttt taaacaaccg tattgccgga cgatgccggt ttgccgcatc
     8701 gggcaatgat ggttcaagcg tttgacgttt gattccaacc ctttgatttc aaacaaaccg
     8761 gctgaagctc ggctattgct tcgcgctatt tgaaaacacc gcctgaattt taaaatatag
     8821 tgga
//
LOCUS       DAWGKF010000080         8603 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.080, whole genome shotgun sequence.
ACCESSION   DAWGKF010000080 DAWGKF010000000
VERSION     DAWGKF010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8603)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8603)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8603
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.080"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(280..3132)
                     /gene="gcvP"
                     /locus_tag="WHR07_001277"
     CDS             complement(280..3132)
                     /gene="gcvP"
                     /locus_tag="WHR07_001277"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HEZ2130490.1"
                     /translation="MKLSELFNPNEFAARHLSFGDEAALLAAVGEKSMDEFVGNTVPQ
                     SIRMPSELDLPDALTEADALAKLKGIASKNVINKSYIGLGYYPTRVPNVILRNVLENP
                     GWYTAYTPYQAEIAQGRLEALLNFQQVCIDLTGFPVAGASLLDEATAAAEAMAMAHRV
                     GKVKSERFFVDARVYPQTLDVMKTRAKYFGFELVVSDFAKADDGEYFGALFQYVGKDG
                     DVQDLQDVIGRLKAKGTIVAVAADIMSLVLLKSPAELGADIALGNTQRFGVPMGFGGP
                     HAAYFAFKDAFKRSAPGRIIGVSKDASGKPALRMALSTREQHIRREKATSNICTAQAL
                     LANLAGMYAVYHGPEGVKRIANRIHALASAFADALVSDGINVVHKVFFDTVTVDFGNK
                     EKADQVFAAALESGYNLRRVNDTQVAAAFHETSACEDLVDLYRAFTGKDTFAFADDVK
                     GRLNAELLRQDDILQHPVFNRYHTEHEMLRYLKKLEDRDLAMNRSMISLGSCTMKLNA
                     TAEMLPITWAEFSDIHPYAPEAQTAGYRELLADMENSLKSITGFDAISFQPNSGAQGE
                     YSGMLAIRRYQEAQGEAQRNICLIPKSAHGTNPATAAMLGLKVVVVDTDEHGNVNIDD
                     LKAKAEQHRDALSAIMITYPSTHGVYEEGIRDICRIVHENGGQVYMDGANLNAQIGIM
                     QPAEVGADVLHMNLHKTFCIPHGGGGPGMGPIGLKAHLAPFAPGHALTDTHSASADQT
                     AVAAAAFGSASILPITWMYLTMMGKQGMEQATRWALLNANYVAKRLSEDYPILYTGKN
                     GRVAHECIVDLRPLKAESGITETDIAKRLMDYGFHAPTVSFPVAGTLMIEPTESESKA
                     ELDRFIAALKQIKQEVLKVGRGEWPKEDNPLVNAPHTASDVTGEWAHPYSREEAVFPL
                     PFVREHKFWPSVNRVDDVYGDRNLVCSCPPMENYED"
     gene            complement(3163..3522)
                     /locus_tag="WHR07_001278"
     CDS             complement(3163..3522)
                     /locus_tag="WHR07_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130491.1"
                     /translation="MTDRPSLLWIKPGQAEIMEYCEPEEASDPYATYRRASLMAMLPL
                     FVVILVLLNIVFPLLAHPLAWLVPAGFMVLVGGFPLSLPLVALLVLTCCILAHCPPLS
                     RLLCCPCPNHPMSKNSA"
     gene            3470..3700
                     /locus_tag="WHR07_001279"
     CDS             3470..3700
                     /locus_tag="WHR07_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009346381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HEZ2130492.1"
                     /translation="MISACPGFIHSRLGRSVMPSEPAGRLFQKTPYRRNFMRLYGVGF
                     ALQTAYASRSSLVFQSVHDYINNLGADKPLFI"
     gene            complement(3693..4334)
                     /locus_tag="WHR07_001280"
     CDS             complement(3693..4334)
                     /locus_tag="WHR07_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HEZ2130493.1"
                     /translation="MPSEKPMNRRTFLLGAGALLLTACGRKSARTHAKIPEGSTVLAL
                     GDSLTFGYGANPGESYPAQLQKLTGWNIVNGGVSGDTSAQALSRLPALLARKPKLVIV
                     GIGGNDFLRKVPKEQTRANIAKIIETVQKENIPAVLVGVPHITLGALFGHLSDHPLYE
                     DLSEEYGIPLFGGAWAEILGDNNLKSDQIHANGKGYRKFAEDLNQFLRKQGFR"
     gene            complement(4324..4875)
                     /locus_tag="WHR07_001281"
     CDS             complement(4324..4875)
                     /locus_tag="WHR07_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEZ2130494.1"
                     /translation="MNYCEFAASLPENTDNPNKHYHDTQYGFPIEDDNELFERLVLEI
                     NQAGLNWTLMLKKRQAFQTAFEGFDIDTVAAFDDTDRERLLADAGIVRNRLKIDAAIF
                     NARQIQALQQEYGSFKNWLDTHHPRSKDEWVKLFKKHFKFVGGEIVGEFLMSTGYLKG
                     AHAESCPVYRETLKYHPKWLDAI"
     gene            complement(4879..5397)
                     /locus_tag="WHR07_001282"
     CDS             complement(4879..5397)
                     /locus_tag="WHR07_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HEZ2130495.1"
                     /translation="MRLFPIAAALSLAACGTVQSTQYFVLPDSRYIRPATQGGETAVE
                     VRLAEPLKRGGLVYQTDPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDSTRIFIPAS
                     RSGSTEKWTVYIDAFQGSYTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALE
                     QGLKQAAQQMVE"
     gene            complement(5397..7037)
                     /gene="pqiB"
                     /locus_tag="WHR07_001283"
     CDS             complement(5397..7037)
                     /gene="pqiB"
                     /locus_tag="WHR07_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HEZ2130496.1"
                     /translation="MTDNSPPPNGHAQAHVRKNNTFLSAVWLVPLIALIAGGWLWIKE
                     IRNRGPVVTLLMDSAEGIEVNNTVIKVLSIDVGRVTRIKLRDDQKGVEVTAQLNADVS
                     GLIRSDTQFWVVKPRIDQSGVTGLGTLLSGSYIAFTPGKSDEAKDVFQVQDIPPVTAI
                     GQSGLRLNLIGKNDRILNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKL
                     IHSASRFWLESGINIETTGSGITLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTL
                     YDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLH
                     LFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMI
                     ELNDQPSSSPKLRPHTVYAGDTVIATQGGGLDDLQVKLADLLDKFGKLPLDKTVSGLN
                     ASLAELKSTLKSINTLSNNPQTQNIPNELNQTLKELRTTLQGVSPQSPIYGDVQNTLQ
                     SLDKTLKDVQPVINTLKEKPNALIFNSSSKDPIPKGSR"
     gene            complement(7030..8490)
                     /locus_tag="WHR07_001284"
     CDS             complement(7030..8490)
                     /locus_tag="WHR07_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HEZ2130497.1"
                     /translation="MGSAVGGQPLEKIFLPDDKGLFILPNLPVLHPDWVYRLFSFIMP
                     PLIFATFPMKPFAENIPHSLRGNCRDEALPPHTVDCPECGCRADVPRLDRGEAAFCPR
                     CGYKLFRVGRHPFSAPPAYAAASLILMAFAYGMTYIEVGIPGAASVLSLPEMMRLMVF
                     QDYGFLAEVMFVLTFGAPVLFLLLCLYVYAALIRKRVYPALRLATRVMVRLRQAMMVD
                     VFFVSTLVAYIKLSSVAEVRFGSAFYLMFALSVMLIRTSVSVPQHWVYFQIGRLTGDN
                     AVQTASEGKTCCSRCLYFRDSAESPCGVCGAELYRRRPKSLSISSAFLTAAVILYFPA
                     NILPIMISSNPAATEVNTILNGIAYMWDEGDRLIAAVIFSASILVPVLKIAAMSVLIA
                     SARFALPTGAKKLSHLYRITEAVGRWSMIDIFVIIILMCSFHTYAARVIPGSAAVYFC
                     LVVILTMLSAYYFDPRLLWDKRASDGIAFNETEKHD"
BASE COUNT         1926 a         2200 c         2433 g         2044 t
ORIGIN      
        1 gaggcaacgc tgtactggtt tttgttaatc cactatattt gtttgtccgt gtggaaatga
       61 catcaaaggg tgtgaatagg cttttcatct ttgaaatctg tttgcacgat cggatgaata
      121 aaaagtagga tgataaaaaa gctgatgtat ggatactggt ttaactcatt tgttttaaag
      181 ttatagtcga gatacgtgta ttggtgcaac cagtctgccg ttgacgaaaa tgccgtctga
      241 aaatgtttca gacggcattt gtcttcgggg tttcaacggt cagtcttcat aattttccat
      301 cggtgggcag ctgcacacga gattgcggtc gccgtacacg tcgtccacac ggttgacgct
      361 cggccagaat ttgtgttcgc ggacgaatgg caacggaaag acggcttctt cacgggagta
      421 cggatgcgcc cattcgccgg ttacatcgga tgcggtatgc ggagcgttga ccagcggatt
      481 gtcctctttc ggccattcgc cgcgcccgac tttcagcact tcctgtttga tttgtttcag
      541 ggcggcgatg aagcggtcga gttcggcttt gctttcgctc tcggtcggct cgatcatcag
      601 cgtaccggca acggggaagg aaaccgtcgg ggcgtggaag ccgtagtcca tcaggcgttt
      661 ggcgatgtcg gtttcagtga tgccgctttc ggctttgagc ggacgcaaat cgacgataca
      721 ttcatgcgcg acgcggccgt ttttgcctgt atacagaatc ggatagtctt cgctcaggcg
      781 tttggcaacg tagttggcgt tgagcaatgc ccagcgtgtc gcctgttcca tgccttgttt
      841 gcccatcatg gtcaggtaca tccaagtaat cggcagtatg gacgcagaac cgaaggccgc
      901 agcagcaacg gcggtttggt cggcactggc gctgtgggtg tcggtcaaag cgtgtcccgg
      961 tgcgaacgga gccagatggg ctttcaagcc aatcggaccc atgcccggac cgccgccgcc
     1021 gtgagggata cagaaggttt tgtgcaggtt catgtgcaac acgtccgcgc cgacttcggc
     1081 aggctgcatg atgccgattt gggcgttgag gttggcgccg tccatgtaaa cctgtccgcc
     1141 gttttcatgg acgatgcggc agatgtcgcg gatgccttct tcgtacacgc cgtgggtgga
     1201 cggataggta atcatgatgg cggacaaagc gtcgcggtgt tgctcggctt tggctttcaa
     1261 atcgtcgatg ttgacgttgc cgtgttcgtc ggtatcgacg acgacgactt tcaaaccgag
     1321 catggcggcg gtggcggggt tggtgccgtg ggcggatttg ggaatcagac agatgttgcg
     1381 ctgcgcttcg ccttgcgctt cctgatagcg gcggatggca agcataccgc tgtattcgcc
     1441 ctgcgcgccg gagttgggct ggaaggaaat tgcatcaaaa ccggtgatgg atttcaggct
     1501 gttttccata tcggcgagca attcgcggta gccggcggtt tgcgcttcag gagcgtaagg
     1561 atggatgtcg gagaactccg cccaagtaat cggcaacatt tccgcagtcg cgttgagttt
     1621 catggtgcag ctgcccaatg aaatcatgct gcggttcatc gccaagtcgc ggtcttcgag
     1681 ttttttcagg tagcgcagca tttcgtgttc ggtgtggtaa cggttgaaca cgggatgttg
     1741 cagaatgtcg tcttgacgca gcagttcggc gttcagacgg cctttgacat catcggcaaa
     1801 tgcgaacgta tccttgccgg taaacgcgcg gtacaaatca accaaatctt cgcatgccga
     1861 tgtttcgtgg aatgcagccg caacttgagt atcgttaacg cggcgcaggt tatagcccga
     1921 ttccaaagca gcggcaaaca cttggtctgc tttctctttg ttgccgaaat cgacggtaac
     1981 ggtatcgaag aagactttgt gaaccacatt aatgccgtct gaaaccagcg catcggcaaa
     2041 agcagaagcc agcgcgtgaa tgcggttggc gatgcgtttc acgccttcag ggccgtggta
     2101 aacggcatac atacccgcca aattcgccag caatgcttgt gcggtacaaa tattggacgt
     2161 ggctttttcg cggcggatgt gttgctcgcg ggtggacaac gccatgcgca aggcaggttt
     2221 gcctgatgcg tctttggata cgccgatgat gcggccaggg gcggaacgtt tgaacgcgtc
     2281 tttaaacgcg aaataagcgg cgtgcggccc gccgaagccc ataggcacgc cgaaacgttg
     2341 ggtgttgccc aaagcaatat ccgctcccaa ttcggcaggt gatttcagta aaaccaagct
     2401 catgatgtcg gcggcaacag caacgatcgt gccttttgct ttcagacgac cgataacatc
     2461 ctgcaagtct tgcacatcgc cgtctttgcc gacgtattgg aacagcgcgc cgaagtattc
     2521 gccgtcatcc gctttggcaa aatcgctgac caccagctcg aagccgaaat atttggcgcg
     2581 ggttttcatc acgtccaaag tttgcggata cacgcgcgca tccacaaaga aacgctcgga
     2641 tttcaccttg cccacgcggt gcgccatcgc catcgcttca gccgcagcag ttgcctcgtc
     2701 cagcaaagac gcgcccgcca cagggaaacc ggtcaaatcg atacacactt gttggaagtt
     2761 taacaacgct tccaaacgac cctgggcaat ttccgcctga tacggcgtgt aggcggtgta
     2821 ccaacccgga ttttccaaca cgttgcgcaa aatcacgttc ggcacgcggg tcgggtaata
     2881 gcccaaaccg atataggact tgttgatcac gtttttcgac gcaatgcctt tcaatttcgc
     2941 caacgcgtcc gcttcggtca gggcatcggg caaatcgagt tcggacggca tacggatgct
     3001 ttgcggcacg gtattgccga caaattcgtc catgcttttc tcgccgacag cggcaagcaa
     3061 cgccgcttcg tcgccgaaac tcaaatggcg cgcggcaaat tcgttcgggt tgaacaattc
     3121 agatagtttc atttctactc cttcgggttt gtagggctgc catcaggcag aatttttaga
     3181 catcggatga ttcgggcaag ggcagcacaa aagacgggat aatggcggac aatgcgccag
     3241 aatgcagcag gtcaggacaa gcagcgccac aagcggcagc gataagggaa agccgccgac
     3301 caaaaccatg aaacctgcag gcaccagcca agccaaggga tgcgccagaa gcggaaaaac
     3361 aatattgagc agaaccaaaa tcacaacaaa cagcggcagc atcgccatca ggctggcacg
     3421 cctgtatgtt gcgtacgggt cggatgcttc ttcaggttcg caatattcca tgatttcagc
     3481 ctgtcctggc tttatccaca gcaggctcgg acggtcggtc atgccgtccg aaccggcagg
     3541 ccgtcttttt caaaaaacgc cataccgccg caacttcatg cggctgtatg gcgtaggttt
     3601 tgcacttcag acggcatatg cgtcccgaag cagtttggtg ttccagtcgg ttcatgatta
     3661 tataaacaac ttgggtgcgg ataaaccttt gtttatctaa acccctgttt tctcaaaaat
     3721 tgattcaaat cttcggcaaa tttccgatag cctttgccgt tggcgtggat ttggtcggat
     3781 ttcagattat tatcgcccaa aatttccgcc cacgcgccgc cgaacagcgg aatgccgtat
     3841 tcctcggaca aatcctcata cagcggatga tcgctcaaat gcccgaacaa cgcgcccagt
     3901 gtgatgtgcg gcacgccgac gaggacggcg gggatgtttt ccttctgcac ggtttcgatg
     3961 attttcgcga tattggcgcg ggtctgctcc ttgggaactt tgcgcagaaa gtcgttgccg
     4021 cctatgccga caatcacaag cttgggtttg cgtgccaaca gcgcgggcag gcgcgacagg
     4081 gcttgggcgg atgtatcgcc cgatacgccg ccgttgacaa tattccaacc cgtcagtttt
     4141 tgcagttgcg cggggtagga ttcgccaggg tttgcgccgt agccgaaggt aagcgaatcg
     4201 cccaaggcaa gtacggtgct tccttcggga attttggcgt gggttcgggc ggattttctg
     4261 ccgcaggcgg taaggagcaa cgcgcctgcg ccgaggagga aggttcttct gttcattggt
     4321 ttttcagatg gcatcgagcc atttcgggtg gtatttcagg gtttcacggt aaaccggaca
     4381 gctttcggcg tgcgcgcctt tgaggtagcc ggtactcatc agaaattcgc cgacgatttc
     4441 gccgccgacg aatttgaaat gttttttaaa gagtttaacc cattcgtctt tgcttcgcgg
     4501 atggtgcgtg tcgagccagt tcttgaacga gccgtattct tgttgcaacg cttggatttg
     4561 ccgtgcattg aaaatggcgg catcgatttt caggcggttg cggacaatgc ccgcgtcggc
     4621 aagcaggcgt tcgcggtcgg tgtcgtcgaa ggcggcaacc gtatcgatgt cgaaaccttc
     4681 aaatgccgtc tgaaacgcct gccgcttctt cagcatcagc gtccagttta atcctgcctg
     4741 attgatttcc aacaccagcc gctcaaacaa ttcattgtcg tcctcaatcg gaaaaccgta
     4801 ttgcgtgtcg tggtaatgtt tgttcgggtt atcggtgttt tcgggaagtg aggcggcaaa
     4861 ttcgcaatag ttcacgtttt actcgaccat ctgttgcgcc gcctgtttca gtccctgttc
     4921 gagtgcggcg gtcatcgcgg cgtagccgtc accctgctgt tcggtttcga tatggaaggg
     4981 tctgttcgta ccgtcgggta ggacggcgta gccgctgatg agggttttgc ccgtgtagct
     5041 gccttggaat gcgtcaatat agaccgtcca tttttcggta ctgccgctgc gtgaggcagg
     5101 aataaagatg cgtgtgctgt ccaaacggtt gaatgcattg ctcaacgccg cttcgagcat
     5161 atcgtccaag gtgtccgccc aaacgtggtt ttgtgcggtg ttgaggcggt aggggtcggt
     5221 ttgatagacc agtccgccgc gtttgagcgg ttcggcaaga cggacttcga cggcagtttc
     5281 gccgccttgc gttgcaggac ggatgtagcg gctgtcgggc aacacgaaat attgtgtgct
     5341 ttgcacagta ccgcaggcgg caagcgacag ggcggcggca atcgggaaaa ggcgcattat
     5401 cggcttcctt tcgggatagg gtctttgctg ctgctgttga aaatcagcgc gttgggtttt
     5461 tctttcaaag tgttaatgac gggttgaacg tcttttaagg ttttgtccaa actttgcagc
     5521 gtattttgta cgtcgccgta gataggcgat tgcggcgata cgccttgcag ggttgtgcgc
     5581 aactctttca gggtttggtt caactcgttc ggaatgtttt gcgtttgcgg attattgctt
     5641 agcgtgttaa tggatttcag cgtggatttg agttcggcga gcgaagcgtt taaacctgaa
     5701 acggttttgt ctaaaggcag tttgccgaat ttgtccagca aatccgccaa tttgacctgt
     5761 aagtcgtcca aaccgccgcc ttgtgtagcg atgacggtat cgcctgcata aacggtatgc
     5821 ggtcgcagct tgggcgaaga cgaaggctga tcgttcaact caatcatttt gctgccggtc
     5881 agcaggttgt tgctggagat ggtggcggtc aggcctttgt ttaaagccgt ctgaaattgt
     5941 tgtttccaat gctctttgct ttgttcgtcg gcattgattt ccaaacggga aggctcgatg
     6001 cggatgcgta cgggaatcca gccgttttca aataaatgca ggctgtcgtt gcggtcaaaa
     6061 taagggacat cggaaaccac gccgacattc agccctttgt actcgacggg cgaaccgacg
     6121 gtcaggccgc gcacggattg tttgaaaaac gcggtgtagt acagcgagcg gtcgtcaggc
     6181 aggttggcga cttcgctgcg gctgtcgtaa agcgtgaagc tgtcttcgct tttgacgttt
     6241 ttactgtttt tggttttcgg cgaatcaaat gaaatcgcgc ccgacagcag ggcaggcaga
     6301 ggggcggaat tgagtgtgat gccgctgcct gtggtttcga tattgatgcc gctttccagc
     6361 caaaaacggc tggcggaatg aatcagtttg tcgttggggc tttggatgaa gatggtgtaa
     6421 tgcacgcttt ggtcggacgg gtcgaaatgc gcgctttcga cttgcccgac cataaagttt
     6481 tcatacaaaa cagggctgtt gacgttgagg atgcggtcgt ttttaccaat caaattcaag
     6541 cgcagcccgc tttgcccgat ggcggtaacg ggcggaatgt cctgcacttg gaacacgtct
     6601 tttgcctcgt cgcttttgcc gggtgtaaaa gcgatgtacg aacccgaaag cagcgtaccc
     6661 aaaccggtta cgccgctttg gtcgatacgc ggcttgacca cccaaaactg ggtatcgctg
     6721 cggatgaggc cggatacgtc cgcattgagt tgggcggtta cttccacgcc tttttggtcg
     6781 tcgcgcagtt tgattcgggt aacgcgtccg acatcgatgc tcaatacttt gatgaccgta
     6841 ttgttgacct caatgccttc cgcgctgtcc atcaagagcg taaccacagg ccccctgttg
     6901 cggatttcct taatccacag ccagccgccg gcaatcagcg cgatcagcgg aaccagccag
     6961 acggcagaga ggaaggtgtt gtttttgcgg acgtgtgctt gggcgtgtcc gtttggagga
     7021 gggctgttgt cagtcatgtt tttccgtttc gttgaaagca atgccgtctg aagcgcgttt
     7081 gtcccaaagc aggcgcgggt cgaaataata ggcggacagc atcgtcagaa tcacgaccag
     7141 gcagaaatag actgccgcac tgcccggaat gacgcgcgcg gcataagtgt ggaacgaaca
     7201 cattaaaata ataatcacaa aaatatcaat catcgaccag cggccgaccg cttcggtgat
     7261 gcggtagagg tgtgacaatt tctttgcgcc tgtcggcaaa gcgaagcggg cggacgcaat
     7321 taaaaccgac attgccgcaa tcttcagcac cggcaccaaa atactcgcgc tgaaaataac
     7381 cgccgcaatc agcctgtcgc cctcgtccca catataagcg atgccgttaa ggatggtatt
     7441 gacctccgtg gcggcaggat tggacgaaat cataatcggc aggatattgg cagggaaata
     7501 caaaataacc gccgccgtca gaaacgccga cgaaatactc agacttttcg gccgtcggcg
     7561 gtacagttcc gcgccgcaca caccgcaggg ggattcggca ctgtcgcgga aatacaggca
     7621 gcggctgcaa caggttttgc cttccgatgc cgtctgaacc gcattatccc ccgtcagccg
     7681 cccgatttga aaatacaccc aatgctgggg aacggatacc gaagtccgaa tcagcataac
     7741 cgacagcgcg aacatcagat aaaacgccga cccgaagcga acctctgcca cagacgagag
     7801 cttgatatac gccaccagcg tggaaacaaa aaacacatcc accatcatcg cctgcctcaa
     7861 gcgcaccatc acacgcgttg ccaaacgcag cgcaggatac acccgtttcc gtatcagcgc
     7921 ggcatagaca tacaggcaca gcagcagaaa cagaaccggc gcgccgaagg tcagcacaaa
     7981 catcacttcg gccaaaaaac cataatcctg aaacaccatc aggcgcatca tctcgggcag
     8041 cgaaaggacg gatgccgcac ccggtatccc gacctcgata tacgtcatac cgtaagcaaa
     8101 cgccatcaaa atcagcgaag ccgccgcata agcgggcggg gcggaaaaag gatgcctgcc
     8161 caccctgaag agcttatagc cgcagcgcgg gcagaacgcc gcctcccccc tgtccaaccg
     8221 aggcacatcc gcgcggcagc cgcattccgg gcaatctacc gtatgcggcg gtagggcttc
     8281 gtcgcggcag ttgccgcgaa ggctgtgggg gatattttcg gcaaacggct tcatcgggaa
     8341 agtggcaaat ataagtggcg gcattataaa ggaaaaaagg cgatacaccc aatcaggatg
     8401 caaaaccggc aggttcggca gtatgaacaa acccttgtcg tccggcaaaa atattttttc
     8461 gagcggctgt ccgccgactg ccgaacccat ttgataaaat cccgattctg taaagaatag
     8521 taaaatacct gcttaaaaac atcacgcaaa tgatattttt tccaaaaata tgtgataata
     8581 aatttcgttt atgattcttt att
//
LOCUS       DAWGKF010000081         8585 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.081, whole genome shotgun sequence.
ACCESSION   DAWGKF010000081 DAWGKF010000000
VERSION     DAWGKF010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8585)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8585)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8585
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.081"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            154..1338
                     /gene="coaBC"
                     /locus_tag="WHR07_001285"
     CDS             154..1338
                     /gene="coaBC"
                     /locus_tag="WHR07_001285"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HEZ2130498.1"
                     /translation="MGKHILLGVTGSIAAYKSCELVRLLKKQGHSVTVVMSRSATEFV
                     SPLTFQALSGNPVLTDTHGGNGSNGMEHINLTRNADVFLIAPASMNTVAKICNGVADN
                     LLTSLAAARKCPLAIAPAMNVEMWLNPANQRNIAQLVSDGITVYMPGLGEQACGENGM
                     GRMPEPAELLDLLPDLWTPKILRGKKILITAGATFEAIDPVRGITNTSSGKMGVALAR
                     ACRAAGAEVSLIHGQLQTALPFGISDTVQAVSAEDMHRAVHRLIEKQDAFISVAAVSD
                     YKVKNRSTQKFKKDKNAKPLSIELDENPDILASIASLPNPPFCIGFAAETENVMAYAR
                     EKRIKKKIPVIVANDVSIAMGKPTNRITIIGDDGELSFPETSKDEAAMQIVERLAVYL
                     NK"
     gene            complement(1405..3561)
                     /locus_tag="WHR07_001286"
     CDS             complement(1405..3561)
                     /locus_tag="WHR07_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEZ2130499.1"
                     /translation="MPAPQLSAPYDPLTAEARALLFHTASYLKPEEQAELEKAVAYAF
                     RAHDGQTRKSGEPYITHPIAVATQLALWHMDIQGLCAGVMHDVLEDTGVTKGEMAAVF
                     GNTVAEMVDGLSKLEKLKFEDHAEHQAESFRKLILAMTKDVRVIVVKLADRLHNMRTL
                     GSMRPDKRRRIARETLEIYAQIANRIGLNNAYQELQDLSFQNLHPNRYETLKKAMDKS
                     RKNRQDVVGKVLRAFGQRLVGANIEAKIKGREKNLYGIHQKMMAKKLRFAEVMDIYGF
                     RVIVNSIPACYAALGALHTLYQPKPGRFKDYIAIPKSNGYQSLHTTLVGPYGLPIEVQ
                     IRTKEMDAVAEGGIAGHWSYKSYSKTVDQAVLHTNRWLKNILDLQASSANAIEFLEHV
                     KVDLFPNEIYILTPKGKILTLPKGATPVDFAYAVHTDIGHKTVAARINNIMMPLRTKL
                     KTGDSVEIITSEHAKPNPAWLNFAVSGRARSAIRQYIKNLNRHDAVVLGESLLQKALS
                     SLLPKDVLLSDGIKEKYLADLNDKQTSFEEVLYNVGMGHTLPVYVAMHIAELAGEHFG
                     SEVRLSSIKVDGQESGHIHFAECCHPVPGDSIRLLLVKGKGMIIHRDSCPTLLKSDPE
                     QQLDADWENMNGQNYRVGLQVQSEDSHGLLALMAQAISDSGADIESVETPSKSQSGTE
                     GFVEFKFLLKVKNLDQLNQIIQNLHSIPYIRKVIRS"
     gene            complement(3654..3860)
                     /locus_tag="WHR07_001287"
     CDS             complement(3654..3860)
                     /locus_tag="WHR07_001287"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEZ2130500.1"
                     /translation="MARITTEDCTGKISNHFDLTLVAARRARQLENGNTPLVDDVRNN
                     KPTVTALREIAAGHIGTELLTRNK"
     gene            complement(3919..4536)
                     /gene="gmk"
                     /locus_tag="WHR07_001288"
     CDS             complement(3919..4536)
                     /gene="gmk"
                     /locus_tag="WHR07_001288"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEZ2130501.1"
                     /translation="MSAYRKGNIFIISAASGTGKTTLVSRLLANHNGLRVSVSHTTRP
                     PREGEVNGVHYHFVSKEEFESLIAQEAFLEYADVFGNYYGTSAEGVNALAAAGYDVIL
                     EIDVQGAAQVRNALPEAVGIFILPPSFDVLAARLNGRGTDSREVIQRRLSKARHEIEQ
                     SVLFDFVVVNDDLARAEEDLRHIVNACRLKRSRQLGFIADLLENS"
     gene            4664..5263
                     /locus_tag="WHR07_001289"
     CDS             4664..5263
                     /locus_tag="WHR07_001289"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HEZ2130502.1"
                     /translation="MALKTSNLEHAMLVHPEAMSVGALADKIRKIENWPQKGILFHDI
                     TPVLQSAEYFRLLVDLLVYRYMDQKIDIVAGLDARGFIIGAALAYHLNVGFVPIRKKG
                     KLPFETVSQSYALEYGEAAVEIHTDAVKPGSRVLLVDDLVATGGTMLAGLELIRKLGG
                     EIVEAAAILEFTDLQGGKNIRASGAPLFTLLQNEGCMKG"
     gene            complement(5309..6097)
                     /locus_tag="WHR07_001290"
     CDS             complement(5309..6097)
                     /locus_tag="WHR07_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEZ2130503.1"
                     /translation="MNPKIVFFDIDDTLYRKYTDTLRPSVKTAVAALCGKGILTALAT
                     GRSLATIPEKVRDMMAETGMDAVVTINGQFALLHGKTVHEVPMDAGLMGRVCAHLDGL
                     GMDYAFVGGEGIAVSALSECVCRALQHIASDFFADKDYFSSKPVYQMLVFAEENEMPL
                     WSDIVEQEGLKTVRWHEEAVDLLPAGASKTDGIRSVVEALGLEMADVMAFGDGLNDVE
                     MLSEVGFGVAMGNGEQAAKEAAKYVCPGVDEDGVLRGLQDLGVI"
     gene            6422..7777
                     /gene="yegQ"
                     /locus_tag="WHR07_001291"
     CDS             6422..7777
                     /gene="yegQ"
                     /locus_tag="WHR07_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HEZ2130504.1"
                     /translation="MKAPELLLPAGGLERMRAAYDYGADAVYAGSPRYSLRARNNEFA
                     KLDVLEQGIKEAHDRNKKFFLTVNTLPHNSKLKTFVSDMEPLIAMKPDALIMADPGLI
                     MTVREKWPEMPIHLSVQANTTNYWGVKFWQNIGVERIILSRELSMEEIAEIRQQCPDI
                     ELEVFIHGALCIAYSGRCLLSGYFNHRDPNQGTCTNSCRWDYKVHNATESDAGDAQLL
                     QGFNFEKAQEEANQNFEGINGQKRHPYADKVFLIEESNRPGEMMPIMEDEHGTYIMNS
                     KDLRGIEVVEKLAKIGVDSLKVEGRTKSLYYVARVAQSYRKAIDDAVAGRPFDYSLLS
                     ELEGLANRGYTSGFLERHHTQDYQNYLTGHSTAKQSQYVGHVTEIDKNGWATVEVKNR
                     FAVGDSLEIIHPGGNQTIKLEQMTRKGQPVDVAPGNGIQVKIPNMQGKEKALIARVLN
                     P"
     gene            7911..8387
                     /locus_tag="WHR07_001292"
     CDS             7911..8387
                     /locus_tag="WHR07_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease"
                     /protein_id="HEZ2130505.1"
                     /translation="MPAVCQSGSAPKNAHTASAGTPAGESCKVIRDDTAGSGKNIIYR
                     CSNGQAAINAAIADGVLESGIPVSFGGGGVPVANGRNLVTRQAANGVGKSDSEACEHA
                     LINAARKFQQTAGKLGGRSVTGFHSYFDKQPLQGGQYDCQTGSFHVRVVMRANVVR"
BASE COUNT         2170 a         2353 c         2036 g         2026 t
ORIGIN      
        1 ttcctctccc tcctccggct ggtgcgcctt tgtgaatatg ccgtctgaaa ctcggggact
       61 cagacggcat tttgtatcca aacggtatct aatgtatcca cactttgtta tagaatggct
      121 gctgtttttt cttcgtaatt agaaattgtc aaaatgggca aacatattct tttaggtgta
      181 acgggcagta ttgcggcgta taagtcttgc gagttggttc gtctgctgaa aaaacagggg
      241 cattcggtta cggtggttat gagccgctcg gcaactgaat ttgtttctcc gctgactttt
      301 caggctttaa gcggcaatcc tgtcctgacc gacacgcacg gcggcaacgg ttcaaacggt
      361 atggaacata tcaacctgac ccggaatgcg gatgtttttc tgattgcgcc ggcaagtatg
      421 aataccgtgg caaaaatctg taacggcgtg gcagataacc tactgaccag tctggcagcc
      481 gcacggaaat gtccgcttgc catcgctccc gcgatgaatg tggaaatgtg gctcaaccct
      541 gccaaccaac ggaatatcgc acaactggtt tcagacggca ttactgtcta tatgccgggc
      601 ttgggcgaac aggcttgcgg agaaaatggc atgggaagga tgccggaacc tgccgaattg
      661 ctggatttgc ttccggactt gtggacaccg aaaattttaa ggggcaagaa aatcttgatt
      721 accgcaggtg cgacatttga agccattgac cctgtcaggg gcatcacaaa tacctccagc
      781 ggaaaaatgg gggtagcttt ggcgcgggcg tgccgtgccg ccggtgcgga agtcagcctg
      841 attcacggac agcttcaaac cgcgctgcct ttcggcatat ccgatacggt tcaagccgtc
      901 agcgctgaag atatgcatcg cgcagtgcat cgtttgattg aaaaacaaga tgcttttatt
      961 tctgttgccg ccgtctcaga ctataaggtt aaaaacagga gtacacaaaa attcaaaaaa
     1021 gataaaaatg ccaaaccgtt atccatcgaa ttggatgaga accccgatat tttggcttct
     1081 attgcctcat tgccgaaccc gccgttctgc atcggttttg ccgctgaaac ggagaatgta
     1141 atggcatatg cacgagaaaa acgtattaag aaaaaaatac cggtgatagt tgccaatgat
     1201 gtttcaatcg cgatgggcaa accgaccaac cggattacca ttatcgggga cgacggggaa
     1261 ctatcttttc ccgaaacaag taaagatgaa gcggcgatgc agattgttga aaggcttgcc
     1321 gtatatttga acaaataagc aattgaacgg ataaaccata aaacgggttg cctgttaatc
     1381 aaaaggcaac ccgttttacc tgcttcaact tctgatgact ttgcggatat atggaatact
     1441 atgcagattt tgaataatct gattcaactg atccaaattc ttgactttca ataagaattt
     1501 gaattcgaca aaaccttccg ttcccgactg ggatttagac ggtgtttcga ccgactcgat
     1561 gtccgcaccg gaatcggaaa tcgcttgcgc cattaatgcc aacaggccgt ggctgtcttc
     1621 cgattggact tgaagcccga cacggtagtt ctgcccgttc atattttccc agtctgcatc
     1681 cagctgctgt tcgggatcgg acttcaacaa cgtcgggcag ctatccctat ggataatcat
     1741 gccttttccc ttaaccaaca gcaaacggat ggaatcgccg ggaacagggt ggcagcactc
     1801 tgcaaaatga atatgcccgc tttcctgacc atcgacttta atggaactga gcctgacctc
     1861 gctgccgaaa tgctcccctg ccaactcagc aatgtgcatg gcgacataaa caggcagggt
     1921 atgccccatc cctacgttgt acagcacttc ttcaaacgat gtctgcttgt cgttgagatc
     1981 ggcaagatat ttttccttga tgccgtctga aagcaggaca tctttgggca gcaaactgga
     2041 cagggctttt tgtaagaggc tctctcccaa aacgaccgca tcgtgccggt taaggttttt
     2101 aatatattgg cgtatggcac tgcgcgccct gccggacacg gcgaaattca accacgcggg
     2161 attgggtttg gcgtgttcgg atgtgataat ttcaacagaa tcaccggttt tgagcttcgt
     2221 acgcaacggc atcatgatat tgttgatacg tgcggcaacg gttttgtgcc cgatatcggt
     2281 atgcaccgca taagcaaaat cgacaggcgt tgcccctttg ggcaaagtta ggatttttcc
     2341 ttttggcgta aggatgtaga tttcgttcgg aaacaaatcg actttgacgt gttcgagaaa
     2401 ctcaatggca ttggcactgc ttgcctgcaa atctaagata tttttcagcc accggtttgt
     2461 gtgaagcacc gcctgatcga ccgtcttaga atatgattta tagctccaat gtccggcgat
     2521 tccaccttcg gcaacagcat ccatttcctt ggtacgtatc tgaacttcaa tcggcaagcc
     2581 gtaagggccg accaaagtcg tatgcagact ttgatacccg ttgcttttcg gaatggcgat
     2641 atagtctttg aaccgcccgg gcttgggctg atagagggtg tgcaatgcgc cgagtgcggc
     2701 ataacaggct ggaatgctgt tgacaatgac gcggaaaccg taaatatcca taacctcggc
     2761 aaagcgcagc tttttcgcca tcattttctg atggatgccg tacaggtttt tttccctgcc
     2821 tttgattttg gcctctatat tcgcgcctac cagccgctgg ccgaatgcgc gcaagacttt
     2881 gccgacaacg tcctgccggt tcttccggct cttgtccatc gcttttttta aagtctcgta
     2941 gcggttggga tgcaggtttt ggaacgataa atcctgaagc tcttgatatg cgttattcaa
     3001 acctatacgg ttggcaatct gtgcatagat ttcaagggtt tcccttgcaa tccggcggcg
     3061 tttgtccggg cgcatcgaac cgagcgtccg catattatgc agacggtcgg caagtttaac
     3121 gacaatcacg cgcacatctt tggtcatcgc caaaatcagt ttgcggaaac tctccgcctg
     3181 atgttccgca tgatcttcaa atttgagttt ttcgagtttg gacagcccgt ccaccatctc
     3241 ggcaaccgta ttgccgaaca ccgccgccat ttcccctttt gtcacgcccg tatcttccaa
     3301 tacgtcgtgc atcacgcctg cacaaagacc ctgtatgtcc atatgccaaa gggcgagctg
     3361 cgtcgcaacg gcaatcggat gcgtgatgta gggctccccg cttttgcggg tttgcccgtc
     3421 gtgggcgcga aacgcatagg cgacagcttt ttcaagctcc gcctgttcct cgggcttgag
     3481 gtaggaggcg gtatggaaaa gcagggcacg cgcttcggcg gtcaggggat cataaggggc
     3541 ggaaagttgg ggggcgggca tttcagacgg ctttcggaac atattttatt tttcgtttca
     3601 aaccgtcgga ctgcacggcg gcagaatgtg ccgacgtgcg tttccggcag aatttattta
     3661 ttgcgcgtca acagttccgt accgatatgc ccggcggcga tttcccttaa ggcggtaacg
     3721 gtcggtttgt tattgcggac atcgtccaca agcggcgtat tgccattttc aagctggcgg
     3781 gcccgacggg ccgctaccaa tgtcaggtca aaatggttgg aaatttttcc ggtacagtct
     3841 tcggtggtaa tacgtgccat attatttgct ttctttcaaa aatatttaaa ataggaaact
     3901 gggtattttc gcggtttttt aggaattttc caacaaatct gcaataaatc ccagttgccg
     3961 cgaccttttc agacggcagg cattcacaat atggcgcaaa tcctcctccg cccgcgccaa
     4021 gtcatcattg accacgacaa aatcgaacaa tacggactgt tcgatttcat gccttgcctt
     4081 cgacagcctc ctttggataa cttcccgact gtccgtcccg cgtccgttca gacgtgcagc
     4141 aagcacatcg aaagacggcg gcaggataaa gatgccgacg gcttccggca gcgcgttgcg
     4201 aacctgcgcc gcgccctgaa cgtcgatttc caaaattacg tcatagcctg ccgccgccaa
     4261 agcattcacg ccctccgcgc ttgtgccgta atagttgccg aacacgtctg cgtattccaa
     4321 aaaagcttcc tgcgcgataa gcgactcaaa ctcttcttta gaaacaaaat gataatgtac
     4381 gccgtttact tcgccttcac gcggcggacg cgtcgtgtgc gatacggaaa cgcgcaaacc
     4441 gttatggttt gccaacagcc gcgacaccag cgtggttttg cccgtgccgg aagcggccga
     4501 aatgataaag atgttgcctt ttcgataagc ggacatattt tttacctgta tattttccag
     4561 ccgattgtat cacaacggac actcggtttc ctatttgccg atgcccatat tttgccgcta
     4621 ttgttttgat tgatttggca agcggcaggc tgacggctac aatatggcgt taaaaacatc
     4681 aaacttggaa cacgcaatgc tggttcatcc cgaagctatg agtgtcggcg cgcttgccga
     4741 caaaatccgc aaaatcgaaa actggccgca aaaaggcatc ttattccacg acatcacgcc
     4801 cgtcctgcaa agcgcggaat acttccgact tttggttgat ttattggttt accgctatat
     4861 ggatcagaaa atcgacatcg ttgccggttt ggacgcgcgc ggcttcatta tcggcgcggc
     4921 actcgcctac catctcaacg tcggttttgt ccccatccgc aaaaaaggca agctgccttt
     4981 tgaaaccgta tcgcaaagct acgcgctcga atacggggaa gctgcggtgg aaatccacac
     5041 cgatgccgtc aaacccggtt cgcgcgtgct gctggtcgat gatttggttg ccacgggcgg
     5101 cacaatgctt gccgggctgg aactgatccg caaactcggc ggagaaattg tcgaagctgc
     5161 cgctattttg gaatttaccg accttcaagg cggcaagaat atccgtgcaa gcggcgcgcc
     5221 cttatttacc ctgcttcaaa acgaaggctg tatgaagggc tgaaaaccga ccctgccgtc
     5281 tgaaaccggc agggttgtta ttatgcgttc aaatcacgcc caaatcttgc aagcccctca
     5341 acacgccgtc ttcatcaacg ccggggcaaa catatttcgc cgcttctttc gccgcctgtt
     5401 ccccgttgcc cattgccacg ccgaacccga cttctgacag catttccaca tcgttcaaac
     5461 cgtctccgaa cgccatcacg tccgccattt ccaaacccaa tgcttcaacc acgcttctga
     5521 tgccgtctgt tttcgacgca cccgcaggca gcaaatcgac cgcttcctcg tgccagcgca
     5581 ccgttttcaa gccttcctgt tccacaatat ccgaccagag cggcatttcg ttttcctccg
     5641 caaacaccag catctgatac accggtttgc ttgaaaaata atccttatcg gcaaaaaaat
     5701 cgctggcgat atgctgcaag gcgcggcaca cgcattccga cagcgcggac acggcgatcc
     5761 cctctccgcc gacaaacgca taatccatgc ccaagccatc caaatgcgcg caaaccctgc
     5821 ccatcaaacc ggcatccatc ggtacttcgt gcacagtttt tccgtgcagc agcgcaaact
     5881 gtccgtttat cgttaccacg gcatccatac ccgtttccgc catcatgtcc ctgacctttt
     5941 cgggaatcgt cgccaaagac cgccccgttg ccaacgccgt caatatacct ttgccgcaca
     6001 aagccgccac cgccgttttc acggaagggc gcaaggtatc cgtatatttg cggtacagcg
     6061 tatcgtcaat gtcgaaaaac acgattttag gattcatcac attctctctc gcattcaaac
     6121 agccgcattg tatcccaagc aggcaaatac ttgataaatc cttataaatt tcccggcaaa
     6181 attgaccgcg aacacgaaaa ggcggataat ccgcccatcc tcaaaccctt ttcagacggc
     6241 atttgcagca atgccgtctg aaacattttt acaaagcata caaatcatgt ttcaacacac
     6301 aggacgacac ataaagcgtc gccctatatg ttgccctgat tcgaaagggg ttacgcccct
     6361 cccaaataaa gtctgattct accgccctaa agggcggggt ttcaaccgaa aaggaaacac
     6421 gatgaaagca cccgaactct tattgcccgc cggcggattg gaaagaatgc gcgccgccta
     6481 cgattacggc gcagatgccg tttacgccgg cagcccgcgt tactccctgc gcgcccgcaa
     6541 caacgaattt gccaaacttg atgttttaga acaaggcatt aaagaagcgc acgatcgcaa
     6601 caaaaaattc tttttgaccg tcaacaccct gccgcacaat tccaaactca aaacctttgt
     6661 ttccgatatg gaacccttga ttgccatgaa acccgacgcg ctgattatgg cggatccggg
     6721 tttgatcatg accgtgcgcg aaaaatggcc ggaaatgccg atccacctgt ccgtacaagc
     6781 caacaccacc aactactggg gcgtgaaatt ctggcagaat atcggcgtcg aacgcatcat
     6841 cctgtcgcgc gaattgagta tggaagaaat cgccgaaatc cgccaacaat gccccgacat
     6901 cgaactcgaa gtcttcattc acggcgcatt gtgcatcgcc tactccggcc gttgcctact
     6961 ctccggctac ttcaaccacc gcgaccccaa tcaaggcacc tgcaccaact cctgccgttg
     7021 ggactacaaa gtccacaacg ctacggaaag cgatgcgggc gatgcccagc ttctgcaagg
     7081 tttcaacttt gaaaaagccc aagaagaagc caaccaaaac tttgaaggca tcaacggtca
     7141 aaaacgccat ccctacgccg acaaggtttt cctgattgaa gaatccaacc gtccgggcga
     7201 gatgatgccg attatggaag acgaacacgg cacctacatc atgaactcca aagaccttcg
     7261 tggcattgaa gtggttgaga aactcgccaa aatcggcgtg gacagcctca aagtcgaagg
     7321 ccgcaccaag tcgctctatt atgtcgcacg cgtggctcaa tcctaccgca aagcgattga
     7381 cgatgccgtc gcaggccgtc cgtttgatta cagcctgttg agcgaactcg aaggccttgc
     7441 caaccgcggc tacaccagcg gcttcctcga acgccaccac actcaggatt atcaaaacta
     7501 cctgaccggc cattccaccg ccaaacaaag ccaatacgtc ggacacgtta ccgaaatcga
     7561 caaaaacggc tgggcaacag tggaagtcaa aaaccgcttc gccgtcggcg attcactcga
     7621 aatcatccac ccgggcggca accaaaccat caaattggaa caaatgaccc gcaaaggcca
     7681 gcctgtcgat gtcgcacccg gcaacggcat tcaggtcaaa atccccaata tgcaaggtaa
     7741 agaaaaagcc ctcatcgcac gcgtattgaa cccctaagcc acgatgccgt ccgaaccccg
     7801 ttttcagacg gcattttgtt gaatcttacg gtacaatggc aatgatttcc caccgcaagc
     7861 aaggatatcc gacatgaaaa aaaatcctca tactctccgc cgccgccctg atgccggcag
     7921 tctgccaatc cggcagcgca cctaaaaacg cgcacacggc atccgccggc acaccggccg
     7981 gagaatcatg caaagtcatc cgggacgaca ccgcaggaag cggcaaaaac atcatttacc
     8041 gttgcagcaa cggtcaggcg gcaataaatg cagccattgc agacggcgta ttggaatcag
     8101 ggattcccgt cagcttcggc ggcgggggcg taccggttgc aaacggcagg aatctggtta
     8161 cacggcaagc agcaaacggc gttggcaaat ccgactccga ggcctgcgaa cacgccctaa
     8221 tcaatgccgc ccgcaaattc cagcagaccg caggcaaact cggcgggcgc agtgttaccg
     8281 gcttccacag ctacttcgac aagcagccgc tgcaaggcgg gcaatacgac tgtcagacag
     8341 gttcgttcca cgtccgcgtg gtcatgcgcg ccaatgtcgt ccgttaacat atcggcaatc
     8401 aaaaaattag gctgtgtttt agtaatctgt tgatttcaat tatttgcaaa ggaaaagaca
     8461 attatttttt cggttaggaa gagacctatc ctattgaata catttaagtt aaatacgtct
     8521 atcaacacta tattatagtg gattaacaaa aatcaggaca aggcgacgaa gtcgcagaca
     8581 gtaca
//
LOCUS       DAWGKF010000082         8514 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.082, whole genome shotgun sequence.
ACCESSION   DAWGKF010000082 DAWGKF010000000
VERSION     DAWGKF010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8514)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8514)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8514
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.082"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(142..1338)
                     /locus_tag="WHR07_001293"
     CDS             complement(142..1338)
                     /locus_tag="WHR07_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEZ2130506.1"
                     /translation="MSQKLILVLNCGSSSLKGAVLDNGSGEVLLSCLAEKLNLPDAYI
                     TFKVNGEKHKVDLSAHPNHTGAVEALMEELKAHGLDSRIGAIGHRVVSGGELYSESIL
                     VDDEVIAGIEKCIPLAPLHNPAHLLGLRAAQSIFKDLPNVVVFDTSFHQTMPEVAYKY
                     AVPQELYEKYGLRRYGAHGTSYRFVADETARFLGKDKKDLRMVIAHLGNGASITAVAN
                     GESRDTSMGLTPLEGLVMGTRSGDIDPSVFGFLAENANMTIAQITEMLNKKSGLLGIS
                     GLSNDCRTIEEEAAKGHKGAKLALDMFIYRLAKYIGSMAVAAGGLDALVFTGGIGENS
                     DIIRERVIGYLGFLGLNIDQEANLKARFGNAGVITTADSKAVAVVIPTNEELMIAHDT
                     ARLSGL"
     gene            1689..1988
                     /locus_tag="WHR07_001294"
     CDS             1689..1988
                     /locus_tag="WHR07_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130507.1"
                     /translation="MHYFSIHDQSGRHIGFFILLADDESEARPQSGRFAVKLEGGMEN
                     HVLSPFGQTEIPQYWRVVKDRIELFFDEAPVGSLRNEYLTVSGQTFVLNDLTGNM"
     gene            1988..2173
                     /gene="ccoS"
                     /locus_tag="WHR07_001295"
     CDS             1988..2173
                     /gene="ccoS"
                     /locus_tag="WHR07_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HEZ2130508.1"
                     /translation="MESMFILVPISIILAFVIGWFFWWSGKNGQFDDLEGPAHRILMD
                     DDSTSKLIEKERENDVR"
     gene            2163..3473
                     /locus_tag="WHR07_001296"
     CDS             2163..3473
                     /locus_tag="WHR07_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ2130509.1"
                     /translation="MYAKKGGLGLVKSRRFAPLFATQFLGAFNDNVFKTALFVMIGFY
                     GLGQNGFLPAGQMLNLGALLFILPYFLFSSLSGQLGNKFDKAVLARWVKVLEMIIMAV
                     AAYGFYIRSAPLLLACLFCMGAQSTLFGPLKYAILPDYLDDKELMMGNSLIESGTFVA
                     ILFGQILGTAVAGVPPYIVGILVLLVAVGGTVGSLFMPSVPAKAADTQIEWNIVRGTK
                     SLLSETVRHKPVFTAIIGISWFWFVGAVYTTQLPTFTQIHLGGNDNVFNLMLALFSIG
                     IAAGSVLCAKFSRERLMLAWVTVGALGLTVCGLVLVWLTHGHRFEGLNGIFWFLSQGW
                     AYPVMAVMTLIGFFGGFFSVPLYTWLQTASSETFRARAVAANNIVNGIFMVSAAVLSA
                     VLLFLFDSISLLYLIVALGNIPLSVFLIKRERRFLGAAAIRKKP"
     gene            3629..4363
                     /gene="dnaQ"
                     /locus_tag="WHR07_001297"
     CDS             3629..4363
                     /gene="dnaQ"
                     /locus_tag="WHR07_001297"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HEZ2130510.1"
                     /translation="MTTRQIILDTETTGLYADGGDRLVEFAGLEMVNRQMTDKNLHLY
                     VHPERDMPEEAARVHGLTIQVLEGKNAPPFAEVGRQIADFLRGAELIIHNAKFDVGFL
                     NMEFRRMGLPTVEELGCTVTDTLAMAREMFPGQKASLDALCNRFSVDRSKRVLHGALI
                     DCELLGEVYLAMTRRQFDLMGAAAEEKMETKPVVHTETKRSGKLKVIRADENELAEHG
                     QYLDGLGEACIWRKEAVPSENGGTDA"
     gene            4360..5049
                     /locus_tag="WHR07_001298"
     CDS             4360..5049
                     /locus_tag="WHR07_001298"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HEZ2130511.1"
                     /translation="MKRKNIALIPAAGIGARFGADKPKQYVEIGSKTVLEHTLGIFER
                     HEGVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAET
                     DNILVHDAARCCLPSEALTRLIEQAGNAAEGGILAIPVADTLKRADGGNISATVERTS
                     LWQAQTPQLFRAGLLHRALAAENLDGITDEASAVEKLGVRPLLIQGDVRNLKLTQPQD
                     AYIVRLLLDAV"
     gene            5081..5563
                     /locus_tag="WHR07_001299"
     CDS             5081..5563
                     /locus_tag="WHR07_001299"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HEZ2130512.1"
                     /translation="MTNIRIGQGYDVHQLTEGRKLILGGVEIPFEKGLLGHSDADALL
                     HAVTDALLGAAGLGDIGSHFPDTAAEFKDADSRALLRDAYRSVQAKGWHVVNVDTTVI
                     AQKPKLAPHIPQMRANIAADLGIDISCVNIKGKTNEKLGYLGRMEGIEAQAAVLLVRI
                     "
     gene            5640..6311
                     /gene="rpiA"
                     /locus_tag="WHR07_001300"
     CDS             5640..6311
                     /gene="rpiA"
                     /locus_tag="WHR07_001300"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HEZ2130513.1"
                     /translation="MTTQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSG
                     KKIKGAVSTSKKSSELLAQYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHL
                     NEKIVASASEKFICIADESKYVSRLGKFPLPVEVVESARSLVSRKLLAMGGQPELRIG
                     YTTFYGNQIVDVHGLNIDKPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI
                     YPCQG"
     gene            6380..7051
                     /locus_tag="WHR07_001301"
     CDS             6380..7051
                     /locus_tag="WHR07_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HEZ2130514.1"
                     /translation="MQIKKIMKWLPVALSLLGALGYTGYGSEAVRTAVAVLDVLGAAG
                     DAGSDAPARRRASAKSGHRYTGTVSKVYDGDTLHVIDVNGAKHKIRMAYIDAPEMKQA
                     YGTRSRDNLRAAAEGRKVSVRVFDTDRYQREVAQVSVGKTDLNLMQVQDGAAWHYKSY
                     AKEQQDKADFADYADAQIQAERERKGLWKAKNPQAPWAYRRAGRSGRGNKDWMDAVGE
                     WLGIW"
     gene            7230..7976
                     /locus_tag="WHR07_001302"
     CDS             7230..7976
                     /locus_tag="WHR07_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEZ2130515.1"
                     /translation="MDFRFDIIYEYRWMFLYGALTTLGLTVVATAGGSVLGLLLALAR
                     LIHLEKAGAPMRVLAWALRKVSLLYVTLFRGTPLFVQIVIWAYVWFPFFVHPSDGILV
                     SGEAAIALRRGYGPLIAGSLALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQ
                     AMRYVILPQALRRMLPPLASEFITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPL
                     YTVALIYLLMTTFLGWIFLRLEKRYNPQHR"
BASE COUNT         1898 a         2075 c         2508 g         2033 t
ORIGIN      
        1 tttaaattta atccactata aggttcaggt aagcggctgc aaccgtcaat gtctgaaaag
       61 aggcagtgct gtttaagcat ggaaagccgg ataaaaaaaa ctgcctccgt ttccggaggc
      121 agttcgtgtg cggataaaac cttacagacc gctcaaacgg gcagtgtcgt gggcaatcat
      181 cagctcttcg ttggtcggaa tgaccacggc aacggctttg ctgtcggcag tggtaatcac
      241 gccggcgttg ccgaagcggg ctttcaggtt ggcttcttgg tcgatgttca gaccgaggaa
      301 gcccaagtag ccgatcacgc gttcgcggat gatgtcggag ttttcgccga tgccgccggt
      361 aaagaccagt gcgtccaaac cgcctgcggc aaccgccata ctgccgatgt atttggcaag
      421 gcggtagata aacatatcca aggccaattt cgcgccttta tgccccttgg cggcttcttc
      481 ttcaatggtg cggcagtcgt tggacaggcc ggaaatgccg agcagaccgg attttttgtt
      541 cagcatttca gtgatttggg cgatggtcat attggcgttt tcggcgagaa agccgaatac
      601 ggaaggatcg atgtcgccgc tgcgcgtacc cattaccagc ccttccagcg gggtcaggcc
      661 catactggtg tcgcgcgatt cgccgttggc gacggcggta atggacgcgc cgttgcccaa
      721 gtgggcaatg accatacgca ggtctttttt gtctttgccg aggaagcgcg cggtttcgtc
      781 ggcgacgaag cggtagctgg taccgtgcgc gccgtaacgg cgcaggccgt atttttcata
      841 caactcctgc ggaacggcgt atttgtaggc gacttcgggc atggtttggt ggaaggaggt
      901 atcgaatacg acgacgttgg gcaggtcttt gaaaatgctt tgcgcggcac gcaggcccaa
      961 gaggtgggcg gggttgtgca ggggggcgag cgggatgcat ttttcgatgc cggcaatgac
     1021 ttcgtcgtca acgaggatgg attcgctgta cagttcgccg ccgctgacga cgcggtggcc
     1081 gatggcgccg atgcggctgt cgaggccgtg ggctttgagt tcttccatca gggcttcgac
     1141 cgcgccggtg tggttgggat gtgcggacag atcgactttg tgtttttcgc cgtttacttt
     1201 gaatgtgatg taggcatcgg gcaggttgag tttttcggca aggcagctga gcaggacttc
     1261 gccgctgccg ttatccagga ccgcgccttt gagggacgag ctgccgcagt tcaaaaccaa
     1321 gatcaatttt tgggacattt tcttactccg gaaagtttca gacggcattg gaatcggaca
     1381 cggatactaa ccggattcgt gccgaatccg ttttgccttc ctgggcggga aagtagtggg
     1441 gccgtctgaa acggttgata aaagaagcag gttattctaa caaaaaatct ttgcaattgc
     1501 ttggcttaat cgggcgtttg cgtgaaaatg gcggaagtcg ggtattttga cggaaaaaag
     1561 ggggatatgc ggtttgccgg tgttttcggc tgggggaggg agaatttctt tgcattcttc
     1621 ccgtccaaac tggtacattc gccctgtttt tagttggtgt cgtctgaaaa aaggcgggtg
     1681 ggaaatttat gcattatttc agtattcatg accaatcggg acggcatata ggctttttca
     1741 tcctgcttgc cgacgacgaa tcggaagcac ggccgcaaag cgggcgtttt gccgtcaaac
     1801 ttgaaggcgg aatggaaaat catgtcctgt cgccgttcgg tcagacggaa atcccccaat
     1861 attggcgcgt ggtcaaagac cgtatcgagc tgttttttga cgaagctccc gtcggaagtt
     1921 tgcgtaacga atatctgacc gtgtcggggc agacttttgt tttgaacgat ttgacaggga
     1981 atatgtgatg gaaagcatgt ttatattggt gcccatcagc attattttgg cgtttgtcat
     2041 cggctggttt ttttggtggt cgggcaaaaa cgggcagttt gacgacttgg aagggccggc
     2101 gcaccgcatc ctgatggatg atgattcgac aagtaaactg attgaaaaag agagggaaaa
     2161 cgatgtacgc taaaaaaggc ggtttgggac tggttaaaag ccgccgtttc gcacctcttt
     2221 tcgctacgca gtttctcggc gcgttcaacg acaatgtgtt caaaaccgcg ctgtttgtga
     2281 tgattgggtt ttacggtttg gggcaaaacg gcttcctgcc tgccggacag atgttgaact
     2341 tgggcgcgtt gctgtttatt ttgccgtatt tcctgttttc ctcgctgtcg gggcagttgg
     2401 gtaacaaatt cgacaaggcc gttttggcgc gttgggtcaa ggtgctggaa atgatcatta
     2461 tggcggtggc ggcatacggg ttttatatcc ggtctgcccc gctgcttttg gcgtgtctgt
     2521 tttgcatggg cgcgcaatcg acgctgttcg ggccgctgaa atacgccatc ctgcccgatt
     2581 atctcgacga caaagagttg atgatgggca acagcctgat tgaatcgggt acgtttgtcg
     2641 ccatcctgtt cggtcagatt ttgggaacgg cggtggcagg tgtaccgcct tatattgtcg
     2701 ggatactggt tttgctggtc gccgtcggag gcacggtcgg cagcctgttt atgccgtctg
     2761 tacccgccaa ggctgccgat acacaaattg agtggaatat tgtccgtggc acaaaatccc
     2821 tgctgagtga aacggtgcgg cacaagcccg tttttaccgc cattatcggt atttcgtggt
     2881 tttggtttgt cggcgcggtt tataccacgc aactgccgac ctttacccaa atccatctgg
     2941 gcggcaacga caatgttttc aacctgatgc ttgccctgtt ttccatcggt attgccgccg
     3001 gttcggtact gtgtgccaag ttcagcaggg aacggctgat gttggcttgg gtaacggttg
     3061 gtgcgttggg tttgacggtt tgcggcctgg ttttggtgtg gctgacgcac ggacaccgtt
     3121 ttgaagggct gaacggcatt ttttggtttt tatcgcaagg atgggcatat cccgtgatgg
     3181 cggtgatgac gctgatcggc tttttcggcg gatttttctc cgttccgctc tatacttggc
     3241 tgcaaaccgc cagtagcgag actttccgcg cccgcgccgt tgccgccaac aatatcgtta
     3301 acggtatttt tatggtttcc gccgccgttt tgagcgcggt gttgctgttt ttgtttgaca
     3361 gcatttcctt gttgtatctg attgtcgctt tgggcaatat tccgttgtcg gtatttttga
     3421 ttaagcgcga aaggcggttt ttaggcgcgg cggcaatcag gaaaaaacct tgaatgccgt
     3481 ctgaaaaaat tgtccccaaa atacacaatc cgcctgccca atgttgtgaa cacactgtga
     3541 ataagtgggt ttgtgcattg aaatgaaaac agaaaaatac attgcttaaa aaataagcaa
     3601 tttacgaaga tagaagaaag acaccgatat gacgacacgc caaatcatcc tcgataccga
     3661 aaccaccggt ctgtatgccg acggcggcga ccgcttggtc gagtttgccg gtttggaaat
     3721 ggtcaaccgc caaatgaccg acaaaaacct gcacctctat gtccaccccg agcgcgatat
     3781 gcccgaagag gcggcacgcg tccacggctt gacgatacag gttttggaag ggaaaaacgc
     3841 gccgccgttt gcagaggtcg gcaggcagat tgccgatttc ctgcgcggtg cggaactgat
     3901 tatccacaat gccaaattcg acgtgggctt cctcaatatg gagttccgcc ggatggggtt
     3961 gccgaccgtt gaggaactcg gctgtaccgt taccgatacc ctggcgatgg cgcgcgaaat
     4021 gttccccggg cagaaagcca gcctggatgc cttgtgcaac cgtttttccg tcgaccgcag
     4081 caagcgcgtc ctgcacggcg cattgatcga ctgcgaactt ttgggcgaag tctatcttgc
     4141 tatgacgcgg cggcagttcg acctgatggg tgcggccgca gaggaaaaaa tggaaaccaa
     4201 acccgtggtg cataccgaaa ccaaacgcag cggcaaactg aaagtcatca gggcggacga
     4261 aaacgagttg gcggaacacg ggcaatattt ggacggcttg ggcgaagcct gtatctggcg
     4321 caaggaagcc gtgccgtctg aaaacggcgg gacggacgca tgaagcgcaa aaatatcgcg
     4381 ctgattcccg ccgccggcat cggggcgcgt ttcggtgcgg acaaacccaa gcaatatgtc
     4441 gaaatcggaa gcaaaaccgt tttagaacat acgcttggga tttttgaacg gcatgagggc
     4501 gtcgatttga ccgtcgttgt cgtctcgccc gaagacacgt ttgccgataa ggttcagacg
     4561 gcatttccac aggttcgggt gtggaaaaac ggcggacaga cccgcgccga aaccgtccgc
     4621 aacggtgtgg caaaattgtt ggaaaccggt ttggcggcgg aaaccgacaa tattctggta
     4681 cacgatgccg cgcgttgctg cctgccgtct gaagctttga cgcggttgat agaacaggcg
     4741 ggcaacgctg ccgaaggtgg gattttggca attcccgttg ccgatacgct caagcgcgcg
     4801 gacggtggga acattagtgc aaccgtcgag cggacgagcc tttggcaggc gcaaacgccg
     4861 cagcttttcc gcgccgggct gctgcaccgc gcattggctg cggaaaactt ggacggcatt
     4921 accgatgaag cgtccgccgt ggaaaaattg ggtgtgcgtc cgctactgat acagggcgac
     4981 gtgcgcaatt tgaaactgac gcagccgcag gacgcataca tcgtcaggct gctgctcgat
     5041 gccgtctgaa cttcaattca aaacatcagg aacacaaacg atgacgaaca tccgtatcgg
     5101 acagggctac gatgtccacc aactgaccga aggcagaaag ctgatacttg gcggagttga
     5161 aatcccattt gaaaaagggc tgctcggaca ctccgatgcc gatgcgctgc tgcacgccgt
     5221 taccgacgcg ctgctcggtg cggcaggttt gggcgatatc ggcagccatt tccccgacac
     5281 cgccgcagag ttcaaagatg cggacagccg cgccctgctg cgcgatgcct atcggagcgt
     5341 tcaagctaag gggtggcatg tcgtcaatgt cgatacgacc gtgattgcac agaaacccaa
     5401 actcgcgccg cacattccgc aaatgcgtgc caacatcgcc gccgatttgg gcatagacat
     5461 ttcgtgtgtc aacatcaaag gtaaaaccaa cgaaaaactc ggttatctcg ggcgcatgga
     5521 aggcatagag gcgcaggcgg cggtattgct ggtacggatt tgaacgcggc gggcaggacg
     5581 tgcaaataaa tgttaagatg gcggctgttt gttgatacgg tttcccaaag gacaaaaata
     5641 tgacgacaca agacgaactc aagcgcatcg ctgccgaaaa agcagtcgaa ttcgtacccg
     5701 aaaacgaata catcggcatc ggtaccggtt cgaccatcaa ctttttcatc gaagccttgg
     5761 gtaaaagcgg taaaaaaatc aaaggcgcgg tatctacttc caaaaaatcc agcgaactgc
     5821 ttgcccagta cgacattccc gtcgtttccc tgaacgaagt atcgggtttg gcggtctata
     5881 tcgacggtgc ggacgaagtg aaccacgccc tgcaaatgat taagggcggc ggcggcgcgc
     5941 acctcaacga aaaaatcgtc gccagcgcat cagaaaaatt catctgcatt gcggatgaaa
     6001 gcaaatatgt ttcacgtttg ggcaaattcc ctctgcccgt ggaagtcgtc gaaagcgcgc
     6061 gttcccttgt ttcgcgcaaa ctgctcgcta tgggcggaca gcccgaactg cgtatcggct
     6121 acaccacgtt ttacggcaac caaatcgtcg atgtccacgg cttgaatatc gacaaaccgc
     6181 tgacgatgga agacgaaatc aacaaaatca ccggcgtact cgaaaacgga atattcgccc
     6241 gcgatgccgc cgatgtgttg attttgggga cggaagaggg tgcgaaagtc atctatccct
     6301 gccaagggta atcctgacgt taagatgccg tctgaaatcc gattccgata tgttcagacg
     6361 gcatcggcat ttgaaaaata tgcagattaa aaaaatcatg aaatggcttc ccgtcgcctt
     6421 gtcgcttttg ggtgcgttgg gttatacggg gtacggcagc gaggcggtgc ggacggcggt
     6481 tgccgtactc gacgtactcg gcgcggcagg ggacgcgggt tccgacgcgc ccgcccgccg
     6541 ccgagcatcg gcgaaatccg gtcaccgcta cacaggcacg gtgtccaaag tctatgacgg
     6601 cgacaccctg cacgttatcg atgttaacgg cgcaaagcac aaaatccgta tggcgtatat
     6661 cgatgcgccg gagatgaaac aggcttacgg cacgcgttcg cgcgacaacc tgcgcgcggc
     6721 ggcggaaggt aggaaagtca gcgtgcgcgt gttcgatacc gaccgctacc agcgtgaagt
     6781 ggcgcaggtt tctgtcggca aaaccgattt gaacctgatg caggtgcagg acggggcggc
     6841 gtggcattat aaaagttatg ctaaagaaca gcaggataag gcggattttg ccgattatgc
     6901 cgacgctcaa attcaggcgg aaagggaacg caaaggcttg tggaaagcta aaaatccgca
     6961 agcgccgtgg gcgtaccgcc gggcaggcag gagcggcagg ggcaataagg attggatgga
     7021 tgccgtgggc gaatggttgg gcatttggta aagacaccgc acggctttga acggcaaatg
     7081 ccgtctgaaa accgcgcgtc cggcattttt gcggagacgc gcaaccgccg tctgccgcga
     7141 taaaaaagtt caggcggcgg tttttacggt aaaatggcgg attattttgc aacggcggca
     7201 gttccgccgg tttttgatac ggacggttta tggattttcg ttttgacatt atttacgaat
     7261 accgctggat gtttctttac ggcgcactga cgaccttggg gctgacggtc gtggcgacgg
     7321 cgggcggttc ggtattgggt ctgttgttgg cgttggcgcg cctgattcac ttggaaaaag
     7381 ccggtgcgcc gatgcgcgtg ttggcgtggg cgttgcgtaa ggtttcgctg ctgtatgtta
     7441 cgctgttccg gggtacgccg ctgtttgtgc agattgtgat ttgggcgtat gtgtggtttc
     7501 cgtttttcgt ccatccttca gacggcattt tggtcagcgg cgaggcggca atcgcgctgc
     7561 gtcgcggata cgggccgctg attgccggtt ctttggcact gatcgccaac tcgggggcgt
     7621 atatctgtga gattttccgc gcgggcatcc agtctataga caaaggacag atggaggcgg
     7681 cgcgttcttt ggggctgacc tatccgcagg cgatgcgcta tgtgattctg ccgcaggcat
     7741 tgcgccgcat gctgccgcct ttggcgagcg agttcatcac gctcttgaaa gacagctcgc
     7801 tgctgtcggt cattgctgtg gcggagttgg cgtatgttca gaatacgatt acgggccggt
     7861 attcggttta tgaagaaccg ctttacaccg tagccctgat ttatctgttg atgacgactt
     7921 tcttaggctg gatattcctg cgtttggaaa aacgttacaa tccgcaacac cgctgattgg
     7981 agtcatatca acaaaaagct gcccgggtat tcatttgagg cagctttttt gtggcaaatt
     8041 tatcgtggat taacaaaaac cagtacggcg ttgcctcgcc ttagctcaaa gagaacgatt
     8101 ctctaaggtg gctgaagcac caagtgaatc ggttccgtac tgtttgtact gtctgtggct
     8161 tcgtcgcctt gtcctgattt ttgttaatcc actataaatt caaagagaaa acgccctatg
     8221 ccgtctgaaa gtctttcaga cggcatctgt cagcctcacg caagagggaa tcccatccat
     8281 acggaaacct gcaccacgtc attcctacga acctacatcc tgtcattccc acgaaagtgg
     8341 gaatccagaa cgtaaaatct gaagaaaccg ttttatccga taagtttccg caccgacaga
     8401 cctagattcc cgcctgcgcg ggaatgacgg cggagaggtt tcggtttttc cgataaattc
     8461 ccgtggcttt gggtttccgg attcccgctt tcgtgggaat gacgaatcca tcca
//
LOCUS       DAWGKF010000083         8293 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.083, whole genome shotgun sequence.
ACCESSION   DAWGKF010000083 DAWGKF010000000
VERSION     DAWGKF010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8293)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8293)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8293
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.083"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(59..1315)
                     /locus_tag="WHR07_001303"
     CDS             complement(59..1315)
                     /locus_tag="WHR07_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HEZ2130516.1"
                     /translation="MNAAQLDHTAKVLAEMLTFKQPSDAVLSAYFREHKKLGRQDRHE
                     IAETAFAALRHYQKISTALRRPHAQPRKAALAALVLGRSTNISQIKDLLDEEETEFLG
                     NLKARKTEFSDGLNTAAELPQWLVEQLQQHWNEEEILAFGRSINQAAPLDIRVNTLKG
                     KRDKVLPLLQAESADAEATPYSPWGIRLKNKIALNKHELFLDGTLEVQDEGSQLLALL
                     VGAKRGEIIVDFCAGAGGKTLAVGAQMANKGRIYAFDIAEKRLANLKPRMTRAGLTNI
                     HPERISSEHDSRIARLAGKADRVLVDAPCSGLGTLRRNPDLKYRQSAETVANLLEQQH
                     SILDAASKLVKPQGRLVYATCSILPEENELQVERFLSEHPEFEPVNCAELLQSLKIDL
                     DTGKYLRLDSAKHQTDGFFAAVLQRK"
     gene            complement(1351..2208)
                     /locus_tag="WHR07_001304"
     CDS             complement(1351..2208)
                     /locus_tag="WHR07_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1853 family protein"
                     /protein_id="HEZ2130517.1"
                     /translation="MNYALDALWWKLTSQPVRDLASLLTAPPLWQSGCELGVRELLGE
                     RGFRYLLALDADPAPLTEHLTRRAPFGHRLGIYAEELLAFWFANAPHAELLAHNLTVS
                     GSDGNTQGAADFVVRLNGKPYHIELTCKYYGGGTGRLEDMRGLDPKDTLLGKAAKLTA
                     QLGLPHTSDGIRTLRQHGLPLDVKPVSIVRGIGFFPQSFHAFEPPLNPYGWRGIYIQD
                     WAEYGFERQEVRYHLLDRMAYLAPARAAETETLNETEIRRIDQGLIAVLECRPDGFWH
                     EIERIMKAV"
     gene            complement(2269..3084)
                     /locus_tag="WHR07_001305"
     CDS             complement(2269..3084)
                     /locus_tag="WHR07_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEZ2130518.1"
                     /translation="MTTLKPALPAYLDNIRIILTRTSHPANIGSAARAMKTMGLHKLT
                     IVAPNLMATPMTENPPVFDPEHPQSFKLPEESFILASGAADVLENATIAASLDEALAD
                     TTIACALTSRRREITAPLQTPRDLVSELLQTANRGEKVALVFGNETFGLSIEEVQACN
                     RLMTINGNPDYFSLNLAQAVQVVCYEIFSQTGSPMTHLQQEDHAATHEQIKGMVAHME
                     SVMNDIGFFNRRNGERLMRRMQSLFGRANTQTEDIDILRGFFNTVSHRIHKKD"
     gene            3148..3318
                     /locus_tag="WHR07_001306"
     CDS             3148..3318
                     /locus_tag="WHR07_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130519.1"
                     /translation="MPSEMFFNNVGNLTLRLKQTRVGRYFTRFGRIYPNQINSDFAAP
                     KDCASEPAVCHP"
     gene            3328..4113
                     /locus_tag="WHR07_001307"
     CDS             3328..4113
                     /locus_tag="WHR07_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HEZ2130520.1"
                     /translation="MNPFLNTAFKAARRAGQMMIRAAGNLDAVKTDSKAFNDFVSDVD
                     RNSEIILVEALKEAYPHHKITCEESGSHGKAAAEYEWIIDPLDGTTNFLHGHPQYAIS
                     MALLHKGVLQEALVYAPERNDVYMASRGKGALLNDRRIRVSNRIELNRCLIGTGFPVV
                     DQSMMDKYLAILKDFLAKTAGGRREGAASLDLCAVATGRFDGFFEFNLKPWDIAAGAL
                     IVQEAGGIVTDMTGEDGWLESGDIVAANPKVLAQMLKIISAHV"
     gene            4383..6507
                     /locus_tag="WHR07_001308"
                     /pseudo
     CDS             4383..6507
                     /locus_tag="WHR07_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219143.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
     gene            6631..8181
                     /locus_tag="WHR07_001309"
     CDS             6631..8181
                     /locus_tag="WHR07_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HEZ2130521.1"
                     /translation="MKKPLISVAAALLGVALGTPYYLGVKAEESLTQQQKILQETGFL
                     TVESHQYERGWFTSMETTVIRLKPELLNNARKYLPDNLKTVLEQPVTLVNHITHGPFA
                     GGFGTQAHIETEFKYAPETEKVLERFFGKQAPVSLANTVYFNGSGKMEVSVPAFDYEE
                     LSGIRLHWEGLTGKTVYQKGFKSYRNSYDAPLFKIKLADKGDAAFEKAHFDSETSDGI
                     NPLALGSSNLTLEKFSLEWKEGVDYNVKLNELVNLVTDLQIGAFINPNGSIAPSKIEV
                     GKLAFSTKTGESGSFINSEGQFRFDTLVYGNEKYGPLDIHIAAEHLDASALTVLKRKF
                     AQISAKKMTEEQIRNDLIAAVKGEASGLFTNNPVLDIKTFRFTQPSGKIDVGGKIMFK
                     DMKKEDLNQLGLMLKKTEADIRMSIPQKMLEDLAVSQAGNIFSVNAEDEAEGRASLDD
                     INETLRLMVDSTVQSMAREKYLTLNGDQIDTAISLKNNQLKLNGKTLQNEPEPDFDEA
                     GMVSEPQQ"
BASE COUNT         2012 a         2031 c         2311 g         1939 t
ORIGIN      
        1 atgacatgcc gtctgaacgc tttgaaaagg gttcagacgg cattttgttt aaacagggtt
       61 atttgcgttg caatacggcg gcgaagaagc cgtcggtttg gtgttttgcc gaatcgaggc
      121 gcaggtattt gccggtatcc aaatcgattt tcaggctttg cagaagttcg gcgcagttga
      181 cgggttcaaa ttcgggatgt tcggacagga aacgttcgac ttgcagctcg ttttcttcgg
      241 gcaggatgct gcaagtggcg taaaccaagc ggccttgcgg ttttaccagt ttggaggcag
      301 catcgaggat gctgtgttgc tgttccaaaa ggttggccac ggtctcggca gattggcggt
      361 atttgaggtc gggattgcgg cgtaaagtac ccaaaccgga gcagggcgcg tccaccaaca
      421 cacggtcggc tttgcctgcc agtcgggcga tacggctgtc gtgttcgctg ctgatgcgtt
      481 cggggtggat attggtcagt ccggcgcggg tcatacgcgg tttgaggttg gcaaggcgtt
      541 tttcggcgat gtcgaaggcg tagattctgc ctttattggc catttgcgca ccgacagcca
      601 aggttttgcc gccggcaccg gcacagaaat cgacaatgat ttcgccgcgt tttgcgccca
      661 ccaataaagc aagcagctgg ctgccttcgt cttggacttc cagtgtgccg tctaaaaaca
      721 gttcgtgttt gttaagcgcg attttgtttt tcaggcggat gccccaaggc gaataaggcg
      781 ttgcctctgc atcggcactt tcggcttgca acagcggcag cactttatcg cgtttgcctt
      841 tcaaagtgtt gacgcggatg tcgagcggcg cggcttggtt gatgctgcgt ccgaaggcga
      901 ggatttcttc ttcgttccaa tgctgttgca gttgttcgac cagccattgc ggcaattctg
      961 cggcggtatt cagaccgtct gaaaactcgg ttttgcgggc tttcaaattg ccgaggaact
     1021 ctgtttcttc ttcatcaagc aggtctttga tttggctgat gttggtgctt ctgccgagaa
     1081 ccagtgcggc gagtgcggct ttgcgtggct gcgcgtgagg acggcgcagg gcagtgctga
     1141 ttttttgata gtggcgcagc gcggcaaagg cggtttcggc gatttcgtgg cggtcttggc
     1201 ggccgagctt tttatgttcg cggaagtagg cggagaggac ggcatcggaa ggctgtttga
     1261 aagtcagcat ttcagccaaa actttggcgg tatggtcgag ttgtgcggcg ttcataatgt
     1321 aatgggttct cttaaagttg gcaaagggtt tcagacggcc ttcataatgc gttcgatttc
     1381 gtgccaaaag ccgtccggcc gacattccaa aacggcaatc aagccttggt cgatacggcg
     1441 gatttcggtt tcgttcaatg tttcggtttc ggcggcacgc gcaggtgcga ggtaggccat
     1501 gcggtcgagc agatggtagc ggacttcttg gcgttcaaac ccgtattccg cccagtcttg
     1561 aatatagatg ccgcgccagc cgtatgggtt aagcggcggc tcaaaagcat ggaaactttg
     1621 tggaaaaaat ccgatgccgc gcacgatgga aacgggtttt acgtcaagcg gcagaccgtg
     1681 ttgccgcaag gttcggatgc cgtctgaagt gtgcggcaga ccgagttggg cggtcagttt
     1741 ggcggctttt cccaacagcg tgtctttggg gtcgagtccg cgcatgtctt cgagcctgcc
     1801 cgtgccgccg ccgtaatatt tgcaggtcag ctcgatatgg tagggcttgc cgttaagcct
     1861 taccacaaaa tccgccgcgc cttgcgtatt gccgtccgaa ccggaaaccg tgaggttgtg
     1921 cgcgagcagt tcggcgtgtg gcgcgttggc aaaccaaaat gccagcagtt cttcggcgta
     1981 aatgcccaag cggtgtccga acggggcgcg tcgggtgagg tgttccgtca gcggcgcggg
     2041 atcggcatcc aatgccaaaa gatagcggaa accgcgttcc cccaatagtt cgcgcacgcc
     2101 caattcgcaa ccgctttgcc acaaaggcgg cgcagtcagc agcgaggcga ggtcgcggac
     2161 gggttggctg gtgagcttcc accataatgc gtctagggcg taattcatgc ttatccgaat
     2221 atcagtcatg ccgtctgaaa agctggaaat gttttcagac ggccttaatc agtctttttt
     2281 atggatacga tggctgacgg tattgaaaaa accgcgcagg atatcgatgt cttcggtttg
     2341 cgtgttggcg cgtccgaaca ggctctgcat acggcgcatc agacgctcgc cgttgcggcg
     2401 gttgaaaaag ccgatgtcgt tcatcacgct ttccatgtgg gcgaccatgc ctttgatttg
     2461 ctcgtgggtc gcagcgtggt cttcttgttg aagatgggtc atgggcgaac cggtttggct
     2521 gaagatttcg tagcacacga cctgcacggc ttgggcgagg ttgagcgaga aatagtcggg
     2581 attgccgttg atggtcatca gtcggttgca ggcttggact tcttcgatgc tcaagccgaa
     2641 agtctcgttg ccgaaaacca gtgccacttt ctcgcctcgg tttgcggtct gcagtaattc
     2701 ggataccaaa tcgcgcgggg tttgcagcgg cgcagtaatt tcgcggcggc ggctggtcag
     2761 ggcgcaggcg atggtggtgt cggcaagggc ttcgtccaaa gaagcggcaa tggtggcatt
     2821 ttccaaaacg tctgccgcgc cggaagcgag gatgaagctt tcttccggta atttaaacga
     2881 ttgaggatgc tccgggtcaa acacgggcgg gttttccgtc atcggcgttg ccatcagatt
     2941 tggggcgacg atggtcagtt tgtgcagacc cattgttttc atcgcgcgcg cggcagagcc
     3001 gatgttggcg ggatggctgg tgcgcgtgag gatgatgcgg atgttgtcca gataagcggg
     3061 cagggcgggt ttgagagtag tcatgttcgg ttttcggtcg gaatggaata gggtataatg
     3121 cgccgtcttt ttcgttcgga cggtcaaatg ccgtctgaaa tgttctttaa caacgtcgga
     3181 aatttaacgt tgcgcctgaa gcagacacgc gtcgggcggt attttacccg atttggcagg
     3241 atttacccca accaaataaa ctccgatttt gccgctccga aggactgcgc gtccgaaccg
     3301 gcggtatgcc acccttaagg aaatctgatg aatccgtttt tgaatacagc ctttaaagcc
     3361 gcccgccgtg ccggtcagat gatgatacgc gccgcgggca atctcgatgc cgtcaaaacc
     3421 gacagcaaag cattcaacga ttttgtttcc gatgttgacc gcaattccga aatcatcctg
     3481 gttgaggctt tgaaagaagc ctatccgcac cacaaaatca cttgcgaaga aagcggctcc
     3541 cacggtaaag ccgcagccga atacgaatgg attatcgatc cgctcgacgg cacgaccaac
     3601 ttccttcacg gccatcccca atacgccatc tctatggcac tcctgcacaa aggcgtgttg
     3661 caagaagctt tggtgtacgc ccccgaacgc aacgacgttt acatggcttc gcgcggcaaa
     3721 ggcgcgttgc tcaatgaccg ccgcatccgc gtttccaacc gcatcgaatt gaaccgctgc
     3781 ctgatcggta ccggctttcc tgttgtcgat caaagcatga tggacaagta tctggcgatt
     3841 ttgaaagatt tcttggcaaa aaccgccggc ggccgtcgtg aaggcgcggc ttctttggat
     3901 ttgtgtgctg tggcgactgg tcgttttgac ggctttttcg agttcaacct caaaccttgg
     3961 gatattgccg caggcgcatt gattgttcag gaagcgggcg gtatcgtaac cgatatgacg
     4021 ggtgaagacg gctggctgga aagcggcgat attgttgccg ccaatcccaa agtgctggcg
     4081 caaatgttaa aaatcatttc cgcacacgtt taaatttcag cccgctcccg ggaatgcggg
     4141 aaaacgggcg ggtatgccgt ctgaagtatc gcgccgatat ttcagacggc atttttactg
     4201 gcagcggggg caggaaggtg gaaacggcta aatgcccgaa actgccgaag atggaaaccc
     4261 atatctgatt aaacggagaa ccctgtacga tttgtttata gtggattaac aaaaaccagt
     4321 acggtgttgc ctcgccttag ctcaaagaga acgattctct aaggtgctga agcaccaagt
     4381 gaatgggcaa agccaacgcc tttaccgcgc cgattaccgt cgtcaactac gacgaacaag
     4441 ccctcaacaa caccgaagcg cgtactttgg tggatgccgt agcgaaaaaa gacgcttccg
     4501 tttggcagtt cggcggagaa agcaacacgc tgaccggact gtatttcaga ggttatcagc
     4561 ttgatgcgcg ccaattcagc gtcaacggtt tggcaggtat gtacggcacg caaggcacgg
     4621 ccagcgtgca agtcggctcc gcacaactga ttaaaggcgc gtccaccgcc gtaaacggca
     4681 tgaaccctga aggtgcggta tccggttccg tcaatatcga aaccaaaaaa agccgccgat
     4741 gaaggcaacc gcaaaatcgg tttgggccgg tttagcaaca accgcgccca aggtacgttc
     4801 gacttgggtc aacgcttcgg cgaaaacaaa gcattcggcg tacgcgccaa cggcaaactg
     4861 cgccacggcg acactccgcg ccacggttac agcgaagaca acaaagaatt tgcggtaaat
     4921 gccgactatc gcggcgaaac actgcgcgta gcgttcgatt ccatctacgc aaaacgcaaa
     4981 accaacggcg gtcgcgcgcg tatgcaggac attcaaaacg ccggcggacg cttgtttggc
     5041 gcgcccgatg gtaaaaccaa cctgctgcct tcttggaact ggcaaaatac cgccggccaa
     5101 accaatatgc ttacgtttga atgggatgcg tttgataatg cacagattac aggcggtatc
     5161 ggctacaaca aggcacgcta ttacggcacg ctgatttccc cgaccgtatg tttgaatgct
     5221 accagcactt gtaccgatat gcaaaacaca aacgccagcg gcaaagtaac ggcacgcaac
     5281 tatgactaca ataccggtac tgcgcgcctg accgaccaat atttccgcac attgagtatg
     5341 aacctgaccg cacgcggcga atttgaaacc agcccggtaa cacataactg gagtacggct
     5401 ttcgaccgcg ttatccgcca gcggaaaacc attcgcggaa cggcagccgg cgctggcaag
     5461 gtagaagtga aggcaaacga aaatattgcg aatcaattgg catcgttcaa agccgactat
     5521 cccaattctt gggagaactc tgccaacttg gatgccaata tcaaagtcaa cagcctggct
     5581 ttgtccgaca ccttgggctt cgtggataac aaataccgcc tgactttggg cggacgtttc
     5641 caagcggttg aatacaccaa taagaaaaaa tcacagagcg gcgatgccaa acgcttcagc
     5701 ccgatgctga tggcggcgtg ggtgccgcaa cctgatttgg ttgtgtacgg caactatatg
     5761 gaagacttgg agcctgccga tatcaaaacc gatgattccg gcgaaacgac aatggcgaaa
     5821 ccgcgtgtca gccgtcagtt tgaagtgggc gtgcgtaaaa actggggcaa tttcgtaacc
     5881 acgttaaacg cgttccaaat caaacgcccg ggctactggc gcggtcatac aactaccaag
     5941 acaacaaaag gggtaacaac aacgctgacc tatggcaaca attccgattt cgcccgctat
     6001 aaggcgcaag gcggcgcggc cggcgacgag caaggtatgg aacgcaatcg cggtattgag
     6061 ttcaacacct acgcgaactt gctcaacaat actttgcgtc cgactttggg tctgatgtat
     6121 ctgcaatcga ccgtgaaaga gtatccaaat tcacgcgata tgctggttaa cggcgtacaa
     6181 gtcgccaatc cgcgcgtaat tgccaaggca ggtttggaat gggatacacc gtttgccaaa
     6241 ggcttgactt taaacagcaa tgtttcgtat ttcggcaagt cttaccaaga cacgcaaaaa
     6301 caatacgctt tcccgtctta cactttggtt gacgtaggcg cgcgctacaa aaccaagctc
     6361 ggcaaaaata cgttgaccgt cagcagctcg gtggaaaacc tgttcaacaa aaactactgg
     6421 caggtacagc gcggccaata cgaccgcagc ttcgccgtcg tcggtatgcc gcgtacttac
     6481 tggttgaaag cggaattgga tttctgattt ctccgcatcc ggaaaatgcc gtccgaacag
     6541 gtttcagacg gcatttcttt taaagaaata tggcgggata tgcttaaata atgctattct
     6601 agcgtctttg aaacctgctt gtttgaagtg atgaaaaaac ctttgatttc ggttgcggca
     6661 gcattgctcg gcgttgcttt gggtacacct tattatttgg gtgtcaaagc cgaagaaagc
     6721 ctgacgcagc agcaaaaaat attgcaggaa acgggcttct tgaccgtcga atcgcaccaa
     6781 tatgagcgcg gctggtttac ctctatggaa acgacggtca tccgtctgaa acccgagttg
     6841 ctgaataatg cccgaaaata cctgccggat aacctgaaaa cagtgttgga acagccggtt
     6901 acgctggtta accatatcac gcacggccct tttgccggcg gatttggcac gcaggcgcac
     6961 attgaaaccg agttcaaata cgcgcctgaa acggaaaaag ttttggaacg cttttttggg
     7021 aaacaagctc cggtttccct tgccaatacc gtttatttta acggcagcgg taaaatggaa
     7081 gtcagtgttc ccgccttcga ttatgaagag ctgtcgggca tcaggctgca ttgggaagga
     7141 ttgacgggaa aaacggttta tcaaaaaggt ttcaaaagct accgcaacag ctatgatgcg
     7201 cccttgttca aaatcaagct ggcagacaaa ggcgatgccg cgtttgaaaa agcgcatttc
     7261 gattcggaaa cttcagacgg tatcaatccg cttgctttgg gcagcagcaa tctgaccttg
     7321 gaaaaattct ccctagaatg gaaagagggt gtcgattaca acgtcaagtt aaacgaactg
     7381 gtcaatcttg ttaccgattt gcagattggc gcgtttatca atcccaacgg cagcatcgca
     7441 ccttccaaaa tcgaagtcgg caaactggct ttttcaacca agaccgggga atcaggctca
     7501 tttatcaaca gtgaagggca gttccgtttt gacacgctgg tgtacggcaa tgaaaaatac
     7561 ggcccgctgg acatccatat cgccgccgaa catctcgatg cttctgcctt aaccgtattg
     7621 aaacgtaagt ttgcacaaat ttccgccaaa aaaatgaccg aggaacaaat ccgcaatgat
     7681 ttgattgccg ccgtcaaagg cgaggcttcc ggactgttca ccaacaatcc cgtattggac
     7741 attaaaactt ttcgtttcac acagccgtcg ggaaaaatcg atgtgggtgg aaaaatcatg
     7801 tttaaagaca tgaagaagga agatttgaac caattgggtt tgatgctgaa gaaaaccgag
     7861 gcagacatca gaatgagtat tcctcaaaaa atgttggaag acttggcggt cagtcaggca
     7921 ggcaatattt tcagcgtcaa tgccgaagat gaggcggaag gcagggcaag tcttgacgac
     7981 atcaacgaga ccttgcgcct gatggtggac agtacggttc agagtatggc aagggaaaaa
     8041 tatctgactt tgaacggcga ccagattgat actgccattt ctctgaaaaa caatcagttg
     8101 aaattgaacg gtaaaacgtt gcaaaacgaa ccggagccgg attttgatga agccggtatg
     8161 gtttcagagc cgcagcagta atgggtcaaa tgccgtctga aatgttcagg cggcattttg
     8221 ttgtattgga aactgccgtt ttcaaccatt cctttagata agccgtgtcg gattcgtttt
     8281 tatagtggat taa
//
LOCUS       DAWGKF010000084         8247 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.084, whole genome shotgun sequence.
ACCESSION   DAWGKF010000084 DAWGKF010000000
VERSION     DAWGKF010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8247)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8247)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8247
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.084"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(148..1080)
                     /gene="cysK"
                     /locus_tag="WHR07_001310"
     CDS             complement(148..1080)
                     /gene="cysK"
                     /locus_tag="WHR07_001310"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEZ2130522.1"
                     /translation="MKIANSITELIGNTPLVKLNRLTEGLKAEVAVKLEFFNPGSSVK
                     DRIAEAMIEGAEKAGKINKNTVIVEATSGNTGVGLAMVCAARGYKLAITMPESMSKER
                     KMLLRAFGAELILTPAAEGMAGAIAKAKSLVDAHPDTYFMPRQFDNEANPEVHRKTTA
                     EEIWRDTDGKVDVFVAGVGTGGTITGVGEVLKKYKPEVKVVAVEPEASPVLSGGEKGP
                     HPIQGIGAGFIPTVLNTKIYDSITKVSNEAAFETARAIAEKEGILVGISSGAAVWSAL
                     QLAKQPENEGKLIVVLLPSYGERYLSTPLFADLA"
     gene            complement(1274..1879)
                     /locus_tag="WHR07_001311"
     CDS             complement(1274..1879)
                     /locus_tag="WHR07_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130523.1"
                     /translation="MILLHLDFLSALLYAAVFLFLIFRAGMLQWFWASIMLWLGISVL
                     GAKLMPGIWGMTRAAPLFIPHFYLTLGSIFFFIGHWNRKTDGNGWQADPEHPLLGLFA
                     VSNVSMTLAFVGICALVHYCFSGTVQVFVFAALLKLYALKPVYWFVLQFVLMAVAYVH
                     RCGIDRQPPSTFGGSQLRLGGLTAALMQVSVLVLLLSEIGR"
     gene            complement(1876..2727)
                     /gene="dapF"
                     /locus_tag="WHR07_001312"
     CDS             complement(1876..2727)
                     /gene="dapF"
                     /locus_tag="WHR07_001312"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEZ2130524.1"
                     /translation="MNTLKFTKMHGLGNDFMVIDAVSQDFTPEDAPIAAWADRFRGVG
                     FDQLLVVGRSETEGVDFRYRIFNADGSEVGQCGNGARCFARFVADKGLTDKKEICVET
                     ANGVIFPKLSDNGMVTVNMGKPRFMPSEIPFVPELGEGDDACIYGVHLESGIQPVSCV
                     NMGNPHAVIVVDDVECAPVRETGSLIEPHRQFPERVNVGFMQIVSRTAIRLRVFERGV
                     GETQACGTGACAAVVAGIRLGLLDEGKTVEVILPGGTLYIEWACGGDVMMTGPAEAVF
                     EGELAYS"
     gene            2864..3160
                     /locus_tag="WHR07_001313"
     CDS             2864..3160
                     /locus_tag="WHR07_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130525.1"
                     /translation="MFRILLLLFPCAILAACTRNIPANPAVSNCAHLQNRTILYFDAH
                     GKPADGAVKGGFYKIIEIQGANRILIQDFNSTGNALGGSYVPDCRKSSLFPKNI"
     gene            3174..3842
                     /locus_tag="WHR07_001314"
     CDS             3174..3842
                     /locus_tag="WHR07_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEZ2130526.1"
                     /translation="MNHDITFLTLFLLGFFGGTHCIGMCGGLSSAFALQLPPHINRFW
                     LILLLNTGRVSSYTAIGLILGLIGQVGVSLDQTRVLQNILYTAANLLLLFLGLYLSGI
                     SSLAAKIEKIGKPIWRNLNPILNRLLPIKSIPACLAVGILWGWLPCGLVYSASLYALG
                     SGSAATGGLYMLAFALGTLPNLLAIGIFSLQLKKIMQNRYIRLCTGLSVSLWALWKLA
                     VLWL"
     gene            complement(3914..6034)
                     /gene="pnp"
                     /locus_tag="WHR07_001315"
     CDS             complement(3914..6034)
                     /gene="pnp"
                     /locus_tag="WHR07_001315"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEZ2130527.1"
                     /translation="MFNKHVKTFQYGNQTVTLETGEIARQAAAAVKVSMGDTVVLVAV
                     TTNKEVKEGQDFFPLTVDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRPL
                     FPEGFYHDIQIVAMVVSVDPEIDSDIPAMLGASAALVLSGVPFAGPIGAARVGYVNGV
                     YVLNPTKAELAKSQLDLVVAGTSKAVLMVESEAKILPEDVMLGAVVYGHDQMQVAINA
                     INEFADEVNPELWDWKAPETNEELVAKVRGIAGETIKEAFKIRQKQARSAKLDEAWNA
                     VKEALITEETDTLAANEIKGIFKHLEADVVRSQILDGQPRIDGRDTRTVRPLNIQTSV
                     LPRTHGSALFTRGETQALAVATLGTSRDEQIIDALSGEYTDRFMLHYNFPPYSTGEVG
                     RMGAPKRREIGHGRLAKRALLAVLPKPEDFSYTMRVVSEITESNGSSSMASVCGGCLS
                     LLSAGVPLKAHVAGIAMGLILEGNKFAVLTDILGDEDHLGDMDFKVAGTTEGVTALQM
                     DIKIQGITKEIMQIALAQAKEARLHILDQMKAAVAGPQELSAHAPRLFTMKINQDKIR
                     EVIGKGGETIRSITAETGTEINIAEDGTITIAATTQEAGDAAKKRIEQITAEVEVGKV
                     YEGTVVKILDNNVGAIVSVMPGKDGLVHISQIAHERVRNVGDYLQVGQVVNVKALEVD
                     DRGRVRLSIKALLDAPAREENAAE"
     gene            complement(6271..7134)
                     /locus_tag="WHR07_001316"
     CDS             complement(6271..7134)
                     /locus_tag="WHR07_001316"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEZ2130528.1"
                     /translation="MSEIGLVKIYFGKVRDLYEIDDKRMLMVASDRLSAFDVILDDPI
                     PSKGEILTQISNFWFKKLVHIMPNHFTGQTVYDVLPENEAKALEKRAVVAKKLTPVKV
                     EAIVRGYLAGSGWKDYQKTGSVCGIQLPEGMQEAQQLPEVIFTPSTKAAVGDHDENIS
                     FEECERIIGKELAAEVRAKAIQLYTEAAEYAKSRGIIICDTKFEFGLDTNGTLTLMDE
                     VLTPDSSRFWPADQYKVGTNPPSFDKQFVRDWLEQSGWNKKAPAPKVPANVIQKTVEK
                     YQEALTLLTQD"
     gene            7335..8198
                     /gene="rfbD"
                     /locus_tag="WHR07_001317"
     CDS             7335..8198
                     /gene="rfbD"
                     /locus_tag="WHR07_001317"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HEZ2130529.1"
                     /translation="MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCN
                     MVKSFQPDAIVNTAAYTAVDKAEGNAAAAFAVNASAVYNLALAAHRAHARFIHISTDY
                     IFDGKGKRPYQESDFTNPSNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVR
                     TMLNLARERSPLSAVHNQIGCPTYAGDLAAAIIRLLQQTSPVRGIYHYAGGKSVSWYE
                     FAQHIFQAASQQQTSFPVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFGIKPSDWQ
                     KALAQVVSKLL"
BASE COUNT         1974 a         2379 c         1909 g         1985 t
ORIGIN      
        1 tatttccctc aagcgatgtg gcggcaccaa cacctgatta aaacacaacc ggcgttttcg
       61 gcatatacgc aaaaacgcat tttccggcac ggcgttacac cgataccgaa aaatgcgtct
      121 gaatgtttcg acaatccgat taaagcatta tgccaaatct gcaaaaagtg gcgtagagag
      181 atagcgttcg ccataagaag gcagcagcac gactatcagc ttgccttcgt tttcaggctg
      241 tttggcaagc tgcaacgcac tccaaaccgc cgcaccggaa gaaataccca ccaaaatgcc
      301 ttctttttcc gctattgcgc gggcggtttc aaaagccgct tcgttcgaca ctttggtaat
      361 gctgtcgtaa attttggtat tcaaaacggt cggaataaag cctgcgccga tgccttgaat
      421 cgggtgcggg cctttttcgc cgccgctcaa tacgggtgaa gcttcaggct cgacggcaac
      481 cactttaact tcgggtttgt attttttcaa cacttcgccc acgccggtaa tcgtaccgcc
      541 cgtgccgacg ccggcaacga agacatcgac tttgccgtcc gtatcccgcc aaatttcctc
      601 ggcggttgtt ttgcggtgga cttcggggtt tgcctcattg tcgaactggc gcggcataaa
      661 ataagtgtcg ggatgcgcgt ccaccaagga tttcgctttg gcaatcgcgc ccgccatacc
      721 ttcggcggca ggggtcagaa tcagctccgc accaaacgcg cgcaacagca ttttgcgctc
      781 cttactcatg ctttccggca tggtaatcgc cagcttgtag ccgcgtgcgg cacataccat
      841 tgccaaaccg acacccgtat tgccgctggt tgcttcgaca atgacggtgt ttttgttgat
      901 tttgcccgct ttttcggcac cctcgatcat tgcttcggca atgcggtctt tgacgctgct
      961 gcctggattg aaaaattcca gtttcacggc aacctccgcc ttcaaacctt cggtcagacg
     1021 gttcagtttg accaaaggcg tgttgccgat tagttcggtg atgctgtttg caattttcat
     1081 cttctgctcc tgaataataa ggtttcgaca gtaaggcgca atccccatag gcatcctgtc
     1141 cgattgcagg ggatttgcgc cgaaacataa acaaatttcg gatatggctt tatcctaaac
     1201 ctatgccgcc taaaaaacca atatccaaaa tttctttctt tataactttt tgttccgata
     1261 cggccgcacc gtattatctt ccaatttctg aaagcagcag caccagtacc gagacctgca
     1321 tcaacgctgc cgtcaacccg ccgagtcgca gctgcgagcc gccgaacgtt gacggcggct
     1381 gccggtctat accgcagcgg tggacatagg caaccgccat cagcacaaac tgcaacacga
     1441 accaataaac cggcttcagc gcataaagtt tgagcagtgc cgcaaacaca aacacttgaa
     1501 ccgttcccga aaagcaataa tgcaccaacg cacatattcc gacaaaagca agcgtcatcg
     1561 atacattact gacggcaaac agcccgagca gcggatgttc ggggtctgcc tgccatccgt
     1621 ttccatccgt tttccggttc caatgcccga tgaaaaaaaa tatgctgccc aaagtcaggt
     1681 aaaaatgggg gatgaacaag ggcgcggcgc gggtcattcc ccatatgccg ggcatcagct
     1741 ttgcccccaa aaccgatatg cccagccaca gcataatact cgcccaaaac cattgcaaca
     1801 ttcctgcgcg gaatatcaga aacagaaaaa ccgccgcata cagtaaggca gacaaaaaat
     1861 ccaaatgcag caaaatcatg aatacgccaa ctcgccttca aacaccgctt ccgcagggcc
     1921 ggtcatcatc acatcgccgc cgcaggccca ttcgatatat aaagtcccgc ccggcaaaat
     1981 cacctctacc gttttccctt catccaacaa ccccagacgg atacccgcca ccacagccgc
     2041 acacgcgccc gtaccgcacg cttgggtttc gcccacgccg cgctcgaaca cgcgcaaacg
     2101 aatcgcggtt cggctgacaa tctgcataaa gccgacgttg acgcgttcgg gaaactgcct
     2161 gtgcggttcg ataagcgaac cggtttcgcg caccggcgcg cattctacgt catcgaccac
     2221 aatcaccgca tgggggttgc ccatattgac gcagctgaca ggctgaatgc cggattcgag
     2281 atgcaccccg taaatacagg catcatcccc ctcgcccaat tcggggacaa acggtatttc
     2341 agacggcata aacctcggtt tgcccatatt gaccgtaacc atgccgttat cggacaattt
     2401 cggaaaaata acgccatttg ccgtttcaac acaaatttct ttcttatcgg tcaaaccctt
     2461 gtctgcaaca aaacgggcaa aacaacgcgc tccgttgccg cattgcccga cctcgctgcc
     2521 gtcggcattg aaaatacggt aacggaaatc cacgccttcg gtttccgaac gcccgaccac
     2581 caaaagctgg tcgaagccca cgcctcggaa gcggtccgcc catgccgcaa tcggcgcgtc
     2641 ctcgggggta aaatcctgac tgaccgcgtc aatcaccata aaatcgttgc ccaaaccgtg
     2701 cattttggta aatttcaacg tgttcatatt gttccgaaat cccgtatcgt ctgttgcttc
     2761 cgaatccgaa atcccccgca ccgaagggaa atgcttccat ctcccgccgc ctgaggatta
     2821 aaatcagcca ttatactgtt tgttacccct tacaagaaac accatgttcc gcatattact
     2881 gttgcttttc ccttgtgcaa tccttgccgc ctgcacccga aacataccgg caaacccggc
     2941 cgtttcaaat tgcgcgcatc ttcaaaaccg caccatcctg tattttgacg cacacggcaa
     3001 acccgccgac ggcgcagtaa agggcggatt ttacaaaatt atcgaaatac agggtgcaaa
     3061 ccgcatcctt attcaagact ttaacagcac gggcaatgcc ctcggcggat cctatgtgcc
     3121 ggactgccgc aaatcatccc ttttcccgaa aaatatttga cttcaaactg cctatgaacc
     3181 acgacatcac tttcctcacc ctgttcctac tcggtttctt cggcggaacg cactgcatcg
     3241 gtatgtgcgg cggattaagc agcgcgtttg cgctccaact ccccccgcat atcaaccgct
     3301 tttggctgat cctgctgctt aacacaggac gggtaagcag ctatacggca atcggcctga
     3361 tactcggatt aatcggacag gtcggcgttt cactcgacca aacccgcgtc ctgcagaata
     3421 ttttatacac agccgccaac ctcctgctgc tctttttagg cttatacttg agcggtattt
     3481 cttccttggc ggcaaaaatc gagaaaatcg gcaaaccgat atggcggaac ctgaacccga
     3541 tactcaaccg gctgttaccc ataaaatcca tacccgcctg ccttgcggtc ggaatattat
     3601 ggggctggct gccgtgcgga ctggtttaca gcgcgtcgct ttacgcgctg ggaagcggta
     3661 gtgcggcaac gggcgggtta tatatgcttg cctttgcact gggtacgctg cccaatcttt
     3721 tggcaatcgg cattttttcc ctgcaactga aaaaaatcat gcaaaaccga tatatccgcc
     3781 tgtgtacggg attatccgta tcattatggg cattatggaa acttgccgtc ctgtggctgt
     3841 aagccccatt cattcccgat acccgtaaaa ataccgtctg aaacctgttc agacggcact
     3901 ttcaccctaa gcgttactcg gcggcatttt cctcacgggc aggcgcgtcc agcagggctt
     3961 tgatggacag acggacacgg cctctgtcgt ccacttccaa tgctttcacg ttcaccacct
     4021 gaccgacttg caggtagtcg ccgacattgc gtacgcgctc gtgggcgatt tggctgatgt
     4081 gtaccaaacc gtctttgccc ggcatcacgc tgacaatcgc gccgacattg ttgtcgagga
     4141 ttttcaccac agtgccttcg tacactttgc ccacttccac ttcggcagta atctgctcga
     4201 tgcgtttttt cgccgcatcg ccggcttctt gagtggttgc ggcaatggta atcgtaccgt
     4261 cttcggcaat attgatttcc gtaccggttt cagcggtaat cgaacggatg gtttcaccgc
     4321 ccttaccgat aacttcgcgg attttgtctt ggttgatttt catcgtgaac aagcgtggcg
     4381 cgtgtgcgga cagctcttgc gggcccgcaa cggcggcttt catctgatcc aagatgtgca
     4441 gacgcgcttc tttggcctgt gccaaagcga tttgcataat ttctttggta atgccttgga
     4501 ttttgatgtc catttgcagc gcggtaacgc cttcggtcgt accggccact ttaaagtcca
     4561 tatcgcccaa gtggtcttcg tcgcccaaaa tgtcggtcag gacggcaaat ttgttgcctt
     4621 ccagaatcag acccatcgcg ataccggcaa cgtgtgcttt caaaggcacg ccggcagaca
     4681 gcaggctcag gcagccgccg cagacggaag ccatagagga agagccgttg gattcggtaa
     4741 tttcggagac cacgcgcatg gtgtagctga aatcttcagg tttcggcaat acggccaaca
     4801 atgcacgttt agccaaacgg ccgtgaccga tttcacggcg tttcggtgcg cccatgcggc
     4861 ccacttcgcc ggtagagtac ggcggaaagt tgtagtgcag cataaagcgg tcggtgtatt
     4921 cgccggacag cgcgtcgatg atttgctcgt cgcgcgaagt acccaaagtt gcaacggcca
     4981 aagcttgggt ttcgccacgg gtaaacaatg cagaaccgtg cgtgcgcggc aatacgctgg
     5041 tttggatgtt cagcggacgg acggtgcggg tgtcgcggcc gtcgatgcgc ggttggccat
     5101 ccaaaatttg gctgcggacg acatcggctt ccaagtgttt gaaaatgcct ttgatttcgt
     5161 tggctgccaa agtgtcggtt tcttcggtaa tcaacgcttc tttcacggca ttccaagctt
     5221 cgtccaactt ggcagaacgc gcttgttttt gacggatttt gaacgcttct ttaatggttt
     5281 cgccggcaat cccgcggact ttggcaacca gttcctcatt ggtttcaggt gctttccaat
     5341 cccaaagttc cggattgact tcgtcggcaa attcattgat tgcattgatg gcaacctgca
     5401 tttgatcgtg gccgtaaacc accgcgccca gcatcacgtc ttcgggcagg attttggctt
     5461 cggattccac catcaacacg gcttttgaag taccggcgac caccaagtcc aattgcgatt
     5521 tagccaattc ggctttagtc gggttcaaaa cgtacacgcc gtttacataa cccacgcgtg
     5581 ccgcaccaat cggaccggca aacggtacgc cgctcaacac cagcgcggca gatgcgccca
     5641 acattgcagg aatgtcggaa tcgatttccg gatcgacaga caccaccatc gctacgattt
     5701 ggatgtcgtg gtagaaacct tcagggaata aaggacgaat cggacggtcg atcagacggc
     5761 tggtcaggat ttctttttcg ctttgtttgc cttcgcgttt gaagaagccg ccggggattt
     5821 tgcctgcggc gtaagtacgc tcgaggtaat cgacggtcag ggggaagaag tcttgacctt
     5881 ctttcacttc tttattggtg gtaacggcaa ccaaaacgac ggtgtcgccc atagatactt
     5941 taacggcagc ggcggcttgg cgggcgattt cgccggtttc caaagtaacg gtttgattac
     6001 cgtattggaa ggtcttaacg tgtttattga acattattgt tcctttcaaa ataccgcact
     6061 gctaaaacac taataatgca cactaaaatc cgaatgtgca tagttagggt ttcagaccgt
     6121 gcggcaggtt ataaacaagc tttcagacgg cactccggac gctgaaaaca gcccccgatt
     6181 ataaaggcaa ccatccttaa aatccagtat tgatacaata aaaaggccgt ctgaaccata
     6241 tttctttcag acggccttca aacttaaaaa tcaatcctga gtcagcaaag tcaatgcttc
     6301 ctgatatttt tcgactgttt tttgaatcac attggcaggc actttaggcg caggggcttt
     6361 tttgttccaa ccgctttgtt ccagccagtc gcggacaaat tgtttgtcaa aagacggcgg
     6421 atttgtgccg actttatatt ggtcggcagg ccagaagcgg ctcgaatcgg gggtcaatac
     6481 ctcatccatc agcgtcagcg taccgtttgt atccaaaccg aattcaaatt tggtatcgca
     6541 aatgatgatg ccgcgcgatt tggcatattc cgccgcttct gtataaagct gaatcgcttt
     6601 ggcgcgcact tccgccgcca attcttttcc gataatgcgt tcgcattctt caaagctgat
     6661 gttttcatcg tgatcgccga ctgcggcttt ggttgagggc gtaaaaatca cttcaggcag
     6721 ttgttgcgct tcctgcatac cttcaggcag ttgaataccg caaaccgagc cggttttttg
     6781 ataatctttc caaccgctgc ctgccagata accacgcaca atcgcctcta ctttcaccgg
     6841 agtgagcttt ttagccacga cggcgcgttt ctctaaagct ttggcttcgt tttcaggcaa
     6901 aacatcgtaa accgtttgac cggtaaagtg gttgggcata atatgcacca gttttttaaa
     6961 ccaaaaattg gaaatctgcg tcagaatctc ccctttgctc ggaatcgggt cgtccaaaat
     7021 cacatcgaat gcagacaggc ggtcggaagc gaccatcagc atacgtttat cgtcgatttc
     7081 atataaatcg cgcacttttc caaaatagat ctttaccaaa ccaatctcac tcatttcgcc
     7141 ccccccctga aaatatcttg aaaataccga cccgacaccc gacaggtttg aatcacaaac
     7201 caatattcta gccgaagtcg gcgcaaaaca atacccatgg cacaaaaaac caacccgtca
     7261 accgtcggca aagttttggc actataatac cgacagcaag tcctacaata cacttttacc
     7321 aaaggaaata cctcatgaga atcctattga caggctcaaa aagccaactg gcacgctgcc
     7381 tgcgcgaccg tcttccggaa gactgggaaa ccattgcgac ggattccgca tccctagaca
     7441 ttaccgatgc cgatgccgtc tgcaacatgg tcaaaagttt ccaacccgac gctattgtca
     7501 acacggctgc ctatactgcc gtcgacaaag cggaaggcaa tgcggcagcg gcatttgccg
     7561 tcaatgcttc cgccgtttac aaccttgcct tggcagcaca tcgcgcccat gcccgattca
     7621 tccacatctc aaccgactat atctttgacg gtaaagggaa aaggccctat caggaaagcg
     7681 actttaccaa tccttccaat gtatacggac aatccaaaac cgcaggcgag ctgctcgcac
     7741 tgtctgccaa tcccgacagc cttatcctgc ggacttcttg gctgtttagc gaatacgggg
     7801 acaactttgt ccgcaccatg ctgaaccttg cgcgggaacg ttccccgctg tccgccgtcc
     7861 acaaccaaat cggctgcccg acctatgccg gcgatttagc tgccgccatc atccgccttt
     7921 tgcagcaaac gtcgcccgtg cgcggcattt accactacgc cggcggcaaa tccgtatcct
     7981 ggtacgaatt tgcccaacat attttccaag cggcatcgca acagcagaca tccttccccg
     8041 ttcccgaatt gactgccgtt tcagacaagg aatatccgac cgccgccccc aggcccgcat
     8101 acagcatttt ggactgccgc aaaatcgaaa acgacttcgg catcaaaccg tcagactggc
     8161 aaaaagccct tgcacaggtc gtttccaagc tgctctgatg ccgcccgcct ctccgtttcc
     8221 gccgtcaagc accgccttgg cggtttt
//
LOCUS       DAWGKF010000085         8234 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.085, whole genome shotgun sequence.
ACCESSION   DAWGKF010000085 DAWGKF010000000
VERSION     DAWGKF010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8234)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8234)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8234
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.085"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(208..1593)
                     /gene="pntB"
                     /locus_tag="WHR07_001318"
     CDS             complement(208..1593)
                     /gene="pntB"
                     /locus_tag="WHR07_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HEZ2130530.1"
                     /translation="MSSGLVTAAYIVAAILFIFSLAGLSKQETAKQGCYSGIAGMAVA
                     LFVTVFSDNTHGLGWIIIAMLIGAAIGIYKAKKVEMTEMPELIALLHSFVGLAAVLVG
                     FNSYIAPGNVSHDMHTIHLVEVYLGIFIGAVTFTGSLVAFGKLNGKISSSPLQLPAKH
                     KLNALALGVSFVLLLVFVGIDGSGFILLIMTLIALAFGWHLVASIGGADMPVVVSMLN
                     SYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFVSVIAGGFGSDSG
                     TSSSGSQEIGEYREVKAADVAEMLKGANSVIITPGYGMAVAQAQYPVAEITELLRKNG
                     TEVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFPETDVVLVIGANDTVN
                     PAAQTDPNSPIAGMPVLEVWKAKEVVVFKRSMNTGYAGVQNPLFFNENSVMCFGDAKK
                     TVDDILSELKK"
     gene            complement(1659..2042)
                     /locus_tag="WHR07_001319"
     CDS             complement(1659..2042)
                     /locus_tag="WHR07_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HEZ2130531.1"
                     /translation="MTFAYWCILIACLLPLFCAAYAKKAGGFRFKDNHNPRDFLAHTQ
                     GTAARAHAAQQNGFEAFAPFAAAVLTAHATGNAAQSTINTLACLFILFRLAFIWCYIA
                     DKAAMRSLMWAGGFACTVGLFVAAA"
     gene            complement(2046..3587)
                     /locus_tag="WHR07_001320"
     CDS             complement(2046..3587)
                     /locus_tag="WHR07_001320"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HEZ2130532.1"
                     /translation="MKIGIPRESLSGETRVACTPATVALLGKLGFETVVESGAGLAAS
                     LDDAAYQTAGATVADKAAVWACPLIYKVNAPSEGELPLLNEGQTIVSFLWPRQNEALV
                     EALRAKKVNALAMDMVPRISRAQALDALSSMANISGYRAVIEAANAFGRFFTGQITAA
                     GKVPPAQVLVIGAGVAGLAAIGTANSLGAVVRAFDTRLEVAEQIESMGGKFLKLDFPQ
                     ESGGSGDGYAKVMSDEFIAAEMKLFAEQAKEVDIIITTAAIPGKPAPKLITKEMVESM
                     KSGSVIVDLAAATGGNCELTRPGELSVTGNGVKIIGYTDMANRLAGQSSQLYATNLVN
                     LTKLLSPNKDGEITLDFEDVIIRNMTVTHDGEITFPPPPIQVSAQPQQTPSEKAAPAA
                     KPEPKPVSLWKKLAPAVIAAVLVLWVGAVAPAAFLNHFIVFVLACVIGYYVVWNVSHS
                     LHTPLMSVTNAISGIIVVGALLQIGQGNGFVSLLSFVAILIAGINIFGGFAVTRRMLN
                     MFKKG"
     gene            3877..4710
                     /gene="serB"
                     /locus_tag="WHR07_001321"
     CDS             3877..4710
                     /gene="serB"
                     /locus_tag="WHR07_001321"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HEZ2130533.1"
                     /translation="MPQALVLQFPSAEALPSDFPSRLPEPDCADEKRMRFIVEEGFSL
                     SGADAALLGSRQIDHAVLPDMDFGELGLIVSDMDSTLITIECVDEIAAGVGLKDKVAE
                     ITERSMRGELDFEQSLRSRVALLAGLDEQILADVYENVLKLSPGAEFLLDECKRHDVK
                     FLLVSGGFTFFTERLQQRLGFEYQHANVLEIENGRLTGRLKGRIIDAQAKADLLREYR
                     SRLGLQPHQVLAMGDGANDIPMLKEAGIGVAYRAKPKAQAAADACINFGGLERVRGLF
                     G"
     gene            4774..5996
                     /locus_tag="WHR07_001322"
                     /pseudo
     CDS             4774..5996
                     /locus_tag="WHR07_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360679.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
     gene            6161..7741
                     /gene="purH"
                     /locus_tag="WHR07_001323"
     CDS             6161..7741
                     /gene="purH"
                     /locus_tag="WHR07_001323"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEZ2130534.1"
                     /translation="MSVIKRALISLSDKTGAVEFAQTLTKLGVEILSTGGTAKLLADA
                     GVPVIEVADYTGFPEMLDGRVKTLHPKIHGGILGRRDLDEHVAKMEEHGIGNIDLVCV
                     NLYPFAATIAKPGCTLEDAIENIDIGGPTMVRSAAKNWKHVAIVTDTADFPAIAAEME
                     ANNGALSDKTRFNLSRKAFSHTAQYDGMISNYLTSLSDGVLSGEPEIGEFPSQFNQSW
                     IKVQDMRYGENPHQRAAFYRDIDPAAGSLSAYKQLQGKELSYNNIADADAAWEAVKSF
                     DAPACVIVKHANPCGVAVAADTLTAYKLAYATDTTSAFGGIIAFNREVDGETVKQITD
                     NQFMEVLMAPKFTAEALEIAAAKKNVRVLEVPLEVGANRFELKRVGGGLLVQTPDTCR
                     ISRADLKVVSKRQPTEQEWNDLMFVWNVAKYVKSNAIVFGKGGQTYGIGAGQMSRVDS
                     TRIAARKAQDANLDLNGACAASDAFFPFRDGVDVIAEQGIKAIIHPAGSMRDQEVFDA
                     ADEHGIAMVVTDVRHFRH"
BASE COUNT         1824 a         2256 c         2345 g         1809 t
ORIGIN      
        1 taaaaatcca tcttcaacac ggagatggat tttgtttgtt tcgttgattt tgtgtcagtt
       61 tcagatgtag gtgcttattc ggacgggccg tctgaaaatg tttgccccaa tgcaaaaaaa
      121 atcactgcaa accttcataa acggggtttg cagtgatttt ttcaaatcaa acagattgaa
      181 aacctgcgcc gaattgttca gacggcatta ttttttcagt tcggacagaa tgtcatccac
      241 ggttttcttc gcatctccga aacacattac gctgttttcg ttgaagaaca gcgggttttg
      301 tacacctgcg tagccggtat tcatcgagcg tttgaagacg acgacttctt ttgccttcca
      361 tacttccaac acgggcatac ccgcaatcgg gctgttcggg tcggtttggg cggcaggatt
      421 gacggtatcg ttcgcaccaa tcaccaagac cacatcggtt tcggggaagt cgtcgttgat
      481 ttcgtccatt tccaacacga tgtcgtaggg gactttggct tcggcaagca gtacgttcat
      541 atgaccgggc aggcggccgg cgacggggtg gatgccgaag cgcacttctg tgccgttttt
      601 acgcaaaagc tcggtgattt cggcaacggg gtattgcgct tgtgcgactg ccataccgta
      661 gcccggggta atgatgacac tgtttgcgcc tttcagcatt tcggcaacat cggcagcttt
      721 gacttctcgg tattccccta tctcttggct gccggaagat gatgtgccgc tgtcgctgcc
      781 gaaaccgccg gcgattaccg agacaaacga ccggttcatg gctttgcaca taatgtagga
      841 cagaatcgcg ccgcttgagc cgaccaacgc gccggtaacg atgagcaggt cgttggagag
      901 cataaagcct gccgctgcgg ccgcccagcc ggagtaggag ttgagcatgg acacgaccac
      961 gggcatatct gcgccgccga tggaggcaac caagtgccag ccgaatgcga gggcaatcag
     1021 ggtcataatc agcaggatga agccgctgcc gtcaatgccg acgaatacga gcagcaacac
     1081 aaacgatacg ccaagtgcca gtgcgttgag cttgtgtttg gcgggcagtt gcagcgggct
     1141 gctgctgatt ttgccgttga gtttgccgaa tgcgaccagc gagccggtaa aggttaccgc
     1201 gccgatgaag atgcctaaat acacttcgac cagatggatg gtgtgcatat cgtgcgaaac
     1261 gttgcccggc gcgatatagc tgttgaagcc gaccaaaacc gccgctaggc cgacgaagct
     1321 gtgcagcagg gcaatcagtt cgggcatttc ggtcatttcc acctttttgg ctttgtagat
     1381 gccgattgcc gcgccgatga gcatggcgat gatgatccag cccagtccgt gggtattgtc
     1441 ggaaaaaaca gttacaaaaa gggcgaccgc cataccggcg ataccggaat agcagccctg
     1501 tttggcggtt tcctgtttgg acagccccgc cagtgagaag atgaataaaa ttgcggcaac
     1561 gatatacgcc gctgttacga gtcctgaaga catggaaatt ctccgatttt cgatgatttg
     1621 ttttcaatgc cgtccgaact gttcagacgg tatctgtttc aagcagccgc gacaaacagc
     1681 ccgacggtgc aggcaaatcc gcctgcccac atcagtgagc gcatagcggc tttgtcggcg
     1741 atatagcacc agataaaggc gaggcggaac aggatgaaca ggcaggcaag cgtgttgatg
     1801 gtcgattgcg ccgcattgcc ggttgcgtgt gccgtcaaaa cggcggcggc aaacggtgca
     1861 aaggcttcaa aaccgttttg ctgcgcggcg tgggcacggg cggctgtgcc ttgcgtgtgc
     1921 gccagaaaat cgcgcggatt gtggttgtct ttaaaccgga atccgcccgc ttttttggca
     1981 tatgccgcac aaaaaagcgg caataggcag gcaatcagga tgcaccaata ggcgaaagtc
     2041 atggcttacc ctttcttaaa catattcagc atacgccgtg taaccgcaaa gccgccgaag
     2101 atgttgatgc cggcaatcag gatggcaaca aacgacagca gcgaaacaaa gccgttgccc
     2161 tgaccgattt gcagcagcgc gccgacgacg atgatgccgg agatggcgtt ggtcacggac
     2221 atcagcggcg tatgcagcga gtggctgaca ttccaaacga cgtagtaccc gatgacgcag
     2281 gcaaggacga acacgataaa gtggttcagg aatgctgcgg gtgcgaccgc gccgacccac
     2341 agcaccaata cggcggcgat gacggcgggc gcgagttttt tccacaggga aacaggtttc
     2401 ggctcgggct tggcggcagg cgcggctttt tcagacggcg tttgctgcgg ctgggcggaa
     2461 acttgaatcg gcggaggcgg gaaggtgatt tcgccgtcgt gggtaacggt catgttgcgg
     2521 ataatcacgt cttcgaagtc caacgtgatt tcgccgtctt tgttcgggct taacagcttg
     2581 gtcaggttga ccaagttggt ggcgtaaagc tgggaagact gtccggcaag gcggtttgcc
     2641 atgtcggtgt agccgatgat tttcacgccg ttgccggtta cggacaattc gcccgggcgg
     2701 gtgagttcgc agttgccgcc cgtcgccgcc gccaaatcga cgatgacgga gccggatttc
     2761 atgctttcca ccatttcttt ggtaatcagc ttgggcgcgg gtttgcccgg aatggcggcg
     2821 gtggtgatga tgatgtccac ttctttcgcc tgctcggcaa agagcttcat ctcggcggcg
     2881 ataaattcgt cgctcatcac tttggcgtag ccgtctccgc tgccgcccga ttcttgtggg
     2941 aagtcgagtt tcaggaactt gccgcccatc gattcgattt gttccgccac ttccaagcgg
     3001 gtatcgaacg cgcgtaccac tgcgcctagt gaatttgccg taccgattgc cgccaaacct
     3061 gccacacctg caccaatcac caaaacctgc gcaggcggca ctttgccggc ggcagtaatt
     3121 tgaccggtga agaaacggcc gaaggcgttg gcggcttcaa tcacggcgcg gtagccgctg
     3181 atgtttgcca tcgaagacaa agcgtccaaa gcctgcgcgc gggaaatacg gggcaccatg
     3241 tccatcgcca gcgcattgac tttcttggcg cgcaaggctt cgaccaaagc ctcgttttgg
     3301 cgcggccaca ggaagctgac gatggtttga ccttcgttca aaagcggcag ctcgccttcg
     3361 gacggcgcgt taaccttata aatcaaaggg caggcccaaa ccgccgcttt gtcggcaacg
     3421 gttgcgcctg ctgtttggta agcggcatcg tccaaacttg ccgccaaacc tgcaccgctt
     3481 tcgacaacgg tttcaaagcc cagtttgccc agcagggcga cggtggcggg cgtgcaggcg
     3541 acgcgggttt cgccggataa tgactcgcgt gggataccga ttttcatctc tgaatccttt
     3601 ttcgggtagt ttatatgtat cgtgggttaa atttaaatcg ggggggggcg gagcaacgcc
     3661 gtaccggttt aaagccgact cacttcaaat gttaatatat tttagataat ccccttataa
     3721 cgaattttca tcaggctggc aatagttgcg gcattttccc gtgttgtccg acacatactg
     3781 ccgtttgtgt ttgaagtcat tttccgattg caggcccgcc cgccgtaaca ttctttgccg
     3841 tttcactata taatccgcat tttttgagcc gccgttatgc cgcaagccct cgtcctccaa
     3901 tttccctccg ccgaagccct gccttccgac ttcccctccc gcctgcccga acctgattgc
     3961 gccgatgaaa agcgtatgcg ttttatcgtt gaagaagggt tttctttaag cggggcggac
     4021 gcggcgttgc ttggcagccg tcaaatcgac cacgccgtgt tgccggatat ggatttcggc
     4081 gaactcggtt tgattgtcag cgatatggat tcgacgctga ttaccatcga atgcgtcgat
     4141 gaaattgcgg caggcgtggg tttaaaagac aaggtagcgg aaattaccga gcgttcgatg
     4201 cgcggagagt tggatttcga gcagtcgttg cgcagccgcg ttgcgctgtt ggcgggattg
     4261 gacgaacaga ttttggcgga cgtttatgaa aacgttttga agctctcgcc cggtgcggaa
     4321 tttttgttgg acgaatgcaa aaggcacgat gtgaaattcc tgctggtgtc cggcggcttc
     4381 acgtttttta ccgaacgtct gcaacaacgc ctcggcttcg aataccaaca cgccaatgtt
     4441 ttggaaattg aaaacggcag gttgaccggc cgtctgaaag gcagaatcat cgacgcgcag
     4501 gcaaaggcgg atttattgcg cgaataccgc agccgcctcg gattgcagcc acatcaggtg
     4561 ttggcgatgg gcgacggtgc gaacgatatt ccgatgctca aagaagcggg cataggcgtg
     4621 gcttaccgtg ccaaaccgaa agcgcaggca gccgccgatg cctgtatcaa tttcggcggt
     4681 ttggagcgtg tacgcggcct gttcggatag gcggatagga aacggatgtc gtccgaaagg
     4741 ttttcagacg gcatttgaac ggcaggaacg acagtgggac gcagaaaact ttggtttgcc
     4801 ctggcagcag caggcgttat cggcggtttg gtcggcattg tgctgacgga actgatgcac
     4861 ttcatacagc atacggcaac ggttatggcg cggacggcgt gtacacttcg ttccgcgaag
     4921 gcgtggcaca ggcttccggt atgcggcgcg ttgccgtgct gacgctgtgc ggcgcggtcg
     4981 caggcagcgg ctggtggttg ctgaaacgtt tcggcaagcc gcaaatcgaa atcaaagccg
     5041 ccttgaaaca gccgttgcag gggctgccgt ttctgacgac ggttttccat gttctgctgc
     5101 aaatcataac ggtcggactc ggttcgccgc tcggacgcga agtcgcgccg cgagaaatga
     5161 ccgccgcgtt tgcttcggca ggcggcaaac gcttgggttt ggacgaaggc gaaatgcgcc
     5221 tcttgattgc ctgtgcgtcc ggcgcgggtt tggcggcggt gtataacgtg ccgctcgcct
     5281 ccacgctgtt tatcctcgaa gcgatgttgg gcgtgtggac gcagcaggcc gccgccgccg
     5341 cgttgctgac ttcggtcatt gccaccgccg tcgcgcgcat cggcttaggc gacgtgcagc
     5401 aatatcatcc cgccaacctt gccgtaaaca cctcattact ttggttttcc gccgtcatcg
     5461 gcccgatact gggcgcaacg gcggtatatt tccggcgcag tgccgaaaag ttccccttcc
     5521 tcaagcgcga caatccgaga attattcctt tggcgattgc tttgtttgca ctcatcggcg
     5581 cgattgccgt ttggtttccc gaaattttgg gcaacggcaa agcaggcaac caactgacct
     5641 ttggcggatt gaccgactgg caacacagcc ttgagctgac cgccgtcaaa tggctggttg
     5701 tcttgatggc gttggcggca ggcgcatacg gcggactgat tacgccgtct atgatgctcg
     5761 gcagcaccat ttcttttgca gccgccgccg cgtggaacag cgttttcccc gaaatgccgt
     5821 ctgaaagcgc ggcagtcgtc ggcgccgccg ttttcctcgg cgtttccctc aatatgccgc
     5881 tgaccgccgc cgtctttatt ttggaactca cctacgcccc cgccgctttg ttgatgcctt
     5941 tatgtacggg tatggcgggc gcggtatgga cggcaaggaa aatgggatgt aaataaccga
     6001 aaggcaaaat gccgtctgaa accggttttc agacggcatt cctttgggga ttgtcaacaa
     6061 tatctgcaaa aacctactgc cggaaagtgg aaaatagcgg ataataccgc cccgaaaaag
     6121 ttcccctttc cccatccaac tgtcagaaaa ggaagcccca atgtccgtca tcaaacgcgc
     6181 cctgatcagc ctgtccgaca agacaggcgc agtcgaattt gcccaaaccc tgaccaagct
     6241 cggtgtcgaa atcctctcca ccggcggcac ggcgaaactg cttgccgatg cgggcgttcc
     6301 cgtgattgaa gtcgccgact acaccggttt tcccgaaatg ctcgacggcc gcgtgaaaac
     6361 cctgcatccg aaaatccacg gcggtattct cggccgtcgc gatttggacg aacacgtcgc
     6421 caagatggaa gaacacggca tcggcaacat cgaccttgtg tgcgtcaacc tttacccctt
     6481 cgccgccacc attgccaagc ccggctgcac gctggaagac gcgattgaaa acatcgacat
     6541 cggcggcccg accatggtgc gttctgccgc gaaaaactgg aaacacgtcg ccatcgttac
     6601 cgacacagcc gatttcccgg ccatagctgc cgaaatggaa gccaacaacg gcgcgttgag
     6661 cgacaaaacc cgcttcaacc tgtcgcgcaa agcgttcagc cacaccgccc aatacgacgg
     6721 catgatttcc aactacctga cctcgctttc agacggcgtt ttgagcggag agcctgaaat
     6781 cggcgaattt ccaagccagt tcaaccaaag ctggattaaa gtgcaagaca tgcgctacgg
     6841 cgaaaacccg catcagcgcg ccgcgttcta ccgcgatatt gaccccgccg caggcagcct
     6901 ttccgcctac aaacagcttc aaggcaaaga attgtcctac aacaacatcg ccgatgccga
     6961 tgccgcttgg gaagccgtca aatccttcga cgcgcccgcc tgcgtgattg tgaagcacgc
     7021 caatccttgc ggtgtcgccg ttgcagccga taccttgacc gcctacaaac tcgcctacgc
     7081 caccgacact accagcgcat tcggcggcat cattgccttc aaccgcgaag tggacggcga
     7141 aaccgtcaaa caaattaccg acaaccaatt tatggaagtc ctcatggcgc cgaagtttac
     7201 cgccgaagcc ctcgaaatcg ccgccgccaa gaaaaacgtg cgcgtattgg aagtaccgct
     7261 cgaagtaggt gccaaccgct ttgaactcaa acgcgtcggc ggcggactgt tggtacaaac
     7321 gcccgacacc tgccgcatca gtcgcgccga tttaaaagtc gtttccaaac gccaaccgac
     7381 cgagcaggaa tggaacgacc tgatgtttgt ttggaacgtc gcaaaatacg tcaaatccaa
     7441 cgccatcgtc ttcggtaaag gcggtcaaac ctacggcatc ggcgcaggcc aaatgagtcg
     7501 cgtggacagc acccgcatcg ccgcccgcaa agcgcaagat gccaatctcg acctcaacgg
     7561 cgcatgtgcc gcttccgatg ctttcttccc cttccgcgac ggcgtggacg tgattgccga
     7621 gcagggcatc aaagccatca tccatccggc aggttcgatg cgcgatcagg aagtcttcga
     7681 cgcagcggac gaacacggca tcgccatggt cgtaaccgac gtgcgccact tccgccatta
     7741 acgcagatga acaaggcaat gccgtctgaa gggctttcag acggcatttt gcgctatttt
     7801 gtgaaggtag ggatgacggt tcgggtattc ctgacagggt ggattttcaa ggtgttgtat
     7861 agggtgtagg aggattcgta aaaggtggga tgcagggtgt gcttcagccc gctgcatcaa
     7921 aaatttttgg agaatcggcg ggagtcggcg gttttggttt cggcggggac ggtggaaatg
     7981 ggtaacattg acggaatcga cggaagcggt gggcttcagc ccaccgcttg tatattggaa
     8041 tcaccgtatc atagcgccac ccgcgcccac ccaaggcaca caaccgttgc gtagctcagg
     8101 gagcggcagg gcaacccatc gacacaaccg gacagttgcc ggacaacaca accgaatgca
     8161 aggcaggttt atgatgagta cccaatacca ttacgcaggt atagtgaatt aaatctaaac
     8221 cagtacagcg ttgg
//
LOCUS       DAWGKF010000086         8216 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.086, whole genome shotgun sequence.
ACCESSION   DAWGKF010000086 DAWGKF010000000
VERSION     DAWGKF010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8216)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8216)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8216
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.086"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(63..623)
                     /locus_tag="WHR07_001324"
     CDS             complement(63..623)
                     /locus_tag="WHR07_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HEZ2130535.1"
                     /translation="MNMKTLLALAVSAVCSVSVAQAHEHNTIPKGASIEVKVQQLDPV
                     NGNKDVGTVTITESNYGLVFTPDLQGLSEGLHGFHIHENPSCEPKEKEGKLTAGLGAG
                     GHWDPKGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRGHSIMIH
                     TGGDNHSDHPAPLGGGGPRMACGVIK"
     gene            complement(1040..2080)
                     /gene="mutY"
                     /locus_tag="WHR07_001325"
     CDS             complement(1040..2080)
                     /gene="mutY"
                     /locus_tag="WHR07_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEZ2130536.1"
                     /translation="MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQ
                     VATVLDYYPRFLEKFPTVQTLAAAPQDEVLSLWAGLGYYSRARNLHKAAQQVVRQFGG
                     TFPSERKDLETLCGVGRSTAAAICAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKF
                     ENSLWTLAESLLPSENADMPAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQNRT
                     AELPRKKTAAEVPTLPLYWLIVRNRDGAILLEKRPAKGIWGGLYCVPCFESLNGLSDF
                     AAKFSLTMADMDEQTALTHRLTHRLLMITPFEGQMPSESPSDGIWIKPAHLKDYGLPK
                     PLEIYLNGNRLE"
     gene            2243..3284
                     /locus_tag="WHR07_001326"
                     /pseudo
     CDS             2243..3284
                     /locus_tag="WHR07_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225132.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
     gene            complement(3307..3525)
                     /locus_tag="WHR07_001327"
     CDS             complement(3307..3525)
                     /locus_tag="WHR07_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130537.1"
                     /translation="MPSEALSSLRRHFAAWRRSRHTRQHHSDILPLKCPSAFRIIKIT
                     FSSFDSSRTAHTTRLKKCRLKRIQTASA"
     gene            complement(3540..4178)
                     /locus_tag="WHR07_001328"
     CDS             complement(3540..4178)
                     /locus_tag="WHR07_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HEZ2130538.1"
                     /translation="MSKLTPREILTAGAVVPVMAIDDLSTAIDLSHALVEGGIPTLEI
                     TLRTPVGLDAIRLIAKEVPNAIVGAGTVTNPEQLKAVEDAGAVFAISPGLHESLAKAG
                     RNSGIPLIPGVATPGEIQLALEHGIDTLKLFPAEVVGGKAMLKALYGPYADVRFCPTG
                     GISLATAPDYLALPNVLCVGGSWLTPKEAVKNKDWDTITRLAKEAAALKPKA"
     gene            complement(4359..6194)
                     /gene="edd"
                     /locus_tag="WHR07_001329"
     CDS             complement(4359..6194)
                     /gene="edd"
                     /locus_tag="WHR07_001329"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HEZ2130539.1"
                     /translation="MNTTPIHSKLAEITGRIIERSRPTREKYLAKIRSAKQMGRLERN
                     QLGCSNLAHGYAAMPKSIKIEMLQETVPNLGIITAYNDMVSAHQPFKDFPDQIKDEAQ
                     KNGATAQVAGGTPAMCDGITQGYAGMELSLFSRDVIAMSTAVGLSHQMFDGSLFMGVC
                     DKIVPGLMIGALSFGHIPGIFVPAGPMSSGIGNKEKARTRQLFAEGKVGRNELLKSEM
                     GSYHSPGTCTFYGTANSNQMMMEMMGVHLPAAAFVHPYTDLREALTRYAAGHLARGIK
                     NGTIKPLGEMLTEKSFINALIGLMATGGSTNHTMHLVAMARAAGVILNWDDFDEISSI
                     IPLLIRVYPNGKADVNHFTAAGGLPFVIRELLNAGLLHDDVDTVVGHGMRHYTKEPFL
                     IDGKLEWREAPETSGNDDILRKADNPFSPDGGLRLMKGNIGRGVIKVSAVREGCRIIE
                     APAIVFNDQREVLAAFERGELERDFVCVVRYQGPRANGMPELHKLTPPLGILQDRGFK
                     VALLTDGRMSGASGKVPASIHMTPEALMGGNIAKIRTGDLIRFDSVSGELNVLINETE
                     WNAREVESIDLGANQQGCGRELFANFRSMTSSAETGAMSFGGEFA"
     gene            6710..8155
                     /gene="zwf"
                     /locus_tag="WHR07_001330"
     CDS             6710..8155
                     /gene="zwf"
                     /locus_tag="WHR07_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HEZ2130540.1"
                     /translation="MSTQTNFDLVLFGATGDLAMRKLLPCLYQAHVAGLLHPEGRILG
                     VSRSELDTEGFLAKVETSSKIHVKENFSDEAWASFVERLAYLKVDVTQPDDFAALGDL
                     VKARKETDNVVIYLSTAPKFFAQTCENLAKIGLNADNVRVVLEKPLGTDLASSQQINT
                     DVARYFKEGQIYRIDHYLGKESLQNLLALRFANVMFEPLWNNKYIESVQLTIAEQLGV
                     EERGEFYDITGALRDMVQNHLMQMLCMTAMEAPASLDADAVRDEKVKVIKSLKPLTVE
                     SVNENVVRGQYTAARGMNGYLEEINVPQDSFTETYVAIKAEIENERWKGVPFYLRTGK
                     RMAGKVAEIVLNFKDLNSHIFEGSRTAPNRLVIELQPYESVRLYTQMKTPGAGNKVET
                     VPLATDLGKALESRRAEAYERLLLDVINGKLALFNRRDELEAAWEYVMPILENWTNNT
                     TPPHGYGAHSWGPEAARELLARDGHKWHEEQ"
BASE COUNT         1909 a         1970 c         2270 g         2067 t
ORIGIN      
        1 ctaaatatct agcaaaaaag tgcggtcaaa attcaccgca cttttcgttt cgaacaatcg
       61 aattatttaa tcacgccaca tgccatacgt gggccgccac cgccaagtgg agctggatga
      121 tcggagtgat tatcaccacc cgtgtggatc ataatagagt gaccgcgaac atcatctaaa
      181 tgtttaagac gtggtgctaa aacaggattt gttgctgtgc catcatgcaa tacagttaat
      241 gcaggtaaat cacctaagtg tgcatcatct tgccatgggt aaccatgttg ttttgcacct
      301 ttaggatccc agtgaccgcc tgcgcctaaa ccagctgtca atttaccttc tttttctttt
      361 ggctcacagc ttgggttttc atggatgtgg aaaccatgta agccttcgct taatccttgt
      421 aaatcagggg taaacacaag accatagtta gattcagtaa tagtcactgt acccacatct
      481 ttgttaccgt ttactggatc aagttgttgc actttcactt caatagaagc acctttaggt
      541 atcgtattat gctcgtgtgc ttgcgcaaca ctaactgaac atactgcact aaccgctagt
      601 gctaataagg ttttcatatt cattgcaatc tcctttattg cagtaaaaac tcgcgactat
      661 tttagtcaat tttgttttaa aagccgataa atttttacga aaattttaca ttaattgtta
      721 tttgcagaaa attagaaccc gttatcacgt cttggataaa tgccaaaacc attgtgattc
      781 cgagaattaa aaagaaaaat ttcggaatcc tcatcctttt ctgaaacctg attgcggtat
      841 ccatggcttt gtctttgtca tttaagtttg tgttcatgtt tttgaccttc tttgcttttt
      901 aaatcctttt taaattgccg acttcttccg ttccaaatgt cccatttgaa cattatcccg
      961 ccgcctaaaa tacgacccaa attcatcggt tgttcttgct gcgatacctg caaacaacag
     1021 ttcaatgggt ttattttgtt tattctaacc tattaccgtt taaataaatt tccaaaggct
     1081 tgggcaggcc gtaatctttc aaatgcgccg gctttatcca aatgccgtct gaagggcttt
     1141 cagacggcat ttgtccttca aacggcgtaa tcatcagcag ccggtgcgtc agacggtggg
     1201 tcagggcggt ttgttcgtcc atatctgcca tggtcaggga gaatttggcg gcaaagtcgg
     1261 aaagcccgtt caaactttca aaacacggca cgcaatacag cccgccccaa atgcctttgg
     1321 cggggcgttt ttccagcaaa atcgcgccgt cccggttgcg gacaatcagc cagtaaagcg
     1381 gcagggtcgg tacttcggcg gcggtttttt tgcgcggcag ctcggcggtg cggttttgct
     1441 tttttgcttc gcagatgtcc gccatcgggc attggtggca caagggtttc gtccgtttgc
     1501 acacggtcgc gcccaaatcc atcaaacctt gtgtataggc aggcatatcg gcgttttcag
     1561 acggcagcag gctttcggca agtgtccaga gcgagttttc aaattttttg tcctgcggat
     1621 tgccgtcgcg ggcgaacacg cggcagagta cgcgtttgac gttgccgtcc aaaatggttt
     1681 cgcggcggtt gaaggagaag gcgcaaatgg cggcggcggt gcttctgcct acgccgcaga
     1741 gcgtttccaa gtctttgcgt tccgatggaa acgtgccgcc gaattgcctg acgacttgtt
     1801 gcgcggcttt gtgcaggttg cgcgcgcggc tgtaatagcc caagcccgcc cacaacgaca
     1861 acacttcgtc ttgcggcgcg gcggcaagcg tctgaacggt cgggaatttt tctaagaaac
     1921 gcggatagta gtccaacacg gtggcgactt gcgtttgctg gagcatgatt tcggaaagcc
     1981 agacgcaata agggtttttg acctgccaag ggaggtggtg gcgaccgtgt tgtttttgcc
     2041 agcggatgag ccgttcggag aaggggatgg gtgtgttcat taatatcaat cggtggtttt
     2101 atttatattt aaaacggtat gttattgtat aacattgtga aaataattct tattgactta
     2161 ttttttgtag gggcatataa ctcatataaa gaaactttat tgcggtattg aaattattta
     2221 tcaacaagca aggagtatca gcatgaaagc aatggtttat cacggcgcaa acgacatccg
     2281 ttttgaagaa aaaccccgtc cgcagattat cgatccgacc gatgcggtgg tgaaaatcgt
     2341 caaaaccacg atttgcggta ccgatttggg tatttggaaa ggcaaaaaaa cccgaagtcg
     2401 ccgacggtcg tattctcggt catgaaggca tcggtattgt agaagaagtc ggcgatgctg
     2461 taaaaaacat caaagtcggc gataaagtca ttatttcatg cgtcagcaaa tgctgtactt
     2521 gcgacaactg caaaatccaa ctttattcgc attgccgcaa cggcggctgg attttgggct
     2581 acatgattga cggcacgcag gcagaatacg tccgcacgcc ttatgccgac aacagcctcg
     2641 tgccgctgcc cgacaacgtc aacgaagaag tcgccctgtt gttgagcgac gctttgccga
     2701 ccgcacacga aatcggcgtg caatacggcg atgtcaaacc cggcgacacc gtattcatcg
     2761 caggtgccgc tcctgtcggt atgtccgcct tgttgaccgc ccaactgtat agccccgccg
     2821 ccattatcgt gtgcgatatg gacgaaaacc gtttgaaact ggcgaaagag ttgggcgcga
     2881 cccataccat cagccccgct tccggcgacg tctccaaaca agttttcgcc atcgtcggcg
     2941 aagacggcgt agattgtgcc atcgaagcgg tcggtatccc tgcaacttgg aatatgtgcc
     3001 aagacatcgt gaaacccggc ggccatatcg ccgttgtcgg cgtacacggt caatccgttg
     3061 atttcaaact ggaaaaactg tggattaaaa agcttgccat cactaccggc ctggtaaacg
     3121 ccaataccac cgaaatgctg atgaaggcaa tttccagcag ctccgtcgat tacaccaaaa
     3181 tgttgaccca ccgtttcaaa ttcagcgaat tggaaaaagc ctacgacgtg ttcaaacacg
     3241 ccgccgaaaa tcaagcgatg aaagtggttt tggaagcgga ttaatcggcg ttgaatcagt
     3301 tgttttttaa gcggatgccg tctgaatgcg tttcagacgg cattttttca gccgcgtagt
     3361 atgggctgtc cggctgctgt cgaatgaact gaacgttatt tttattatgc ggaaggcgga
     3421 tgggcatttt aggggcagta tgtcggagtg gtgctgccgt gtatgccgac tgcgccgcca
     3481 agcggcaaaa tgccgtctga gactggaaag ggcttcagac ggcattttta cgatgcggtt
     3541 caggctttgg gtttcaatgc cgccgcttct ttggcgagac gggtgatggt gtcccagtct
     3601 ttgtttttca cggcttcttt cggcgtcagc catgagccgc cgacgcacag gacgttgggc
     3661 agtgccaagt aatcgggcgc ggtggcgagg ctgatgccgc ctgtcgggca gaagcgaaca
     3721 tcggcgtaag ggccgtacag ggctttgagc atggctttgc cgccaacgac ttcggcaggg
     3781 aagagtttga gggtgtcgat gccgtgttcc aaagccagtt ggatttcgcc cggggtggca
     3841 acaccgggaa tcagggggat gccgctgttg cggccggctt tggcgaggga ttcatgcagc
     3901 cccgggctga tggcgaaaac cgcgcctgcg tcttcgacgg ctttaagctg ttcgggattg
     3961 gttaccgtac ctgcgccgac gatggcgttg ggcacttctt tggcaatcag gcggatggca
     4021 tcgaggccga caggggtgcg cagggtgatt tcgagggtag ggatgccgcc ttcgacaagg
     4081 gcgtgggaca aatcgatggc ggtgcttaag tcgtcaatcg ccattaccgg cacaactgcg
     4141 ccggcggtca aaatttcgcg gggggtcagt ttggacattt cggttctccg ggtggaatgg
     4201 ggtattttat taagatggga caggtcgtag gtcggattca agaaaccgac atcttggacg
     4261 gctgtgtcgg attcgagaat ccaacctacg tctatcttaa aacacttgaa taatttttca
     4321 gacggccttc ggtctgaaaa ggccgtctga aacgcgcatc aggcaaattc gccgccgaag
     4381 ctcatcgcgc cggtttcggc gctgctggtc atgctgcgga agttggcgaa aagttcgcgg
     4441 ccgcagcctt gttggttcgc gcccaagtcg atgctttcga cttcgcgggc attccattcg
     4501 gtttcgttaa tcaggacgtt gagttcgccg ctaacggagt cgaagcggat caggtcgccg
     4561 gtacggattt tggcgatgtt gccgcccatc agggcttcgg gcgtcatgtg gatggaggcc
     4621 ggaactttgc cggatgcgcc ggacatacga ccgtcggtca gcagtgccac tttgaagccg
     4681 cggtcttgca ggatgcccaa aggcggggtc agtttgtgca attcgggcat accgttggca
     4741 cgcgggcctt ggtagcggac gacgcacaca aaatcgcgtt ccaactcgcc gcgttcaaac
     4801 gcagccaaca cttcgcgttg gtcgttgaac acgatggcag gcgcttcaat aatgcggcag
     4861 ccttcgcgca cggcggacac tttaatcacg ccacgtccga tgttgccttt catcaggcgc
     4921 agaccgccgt cgggggagaa cgggttgtca gctttacgca ggatgtcgtc gttgccgctg
     4981 gtttcggggg cttcgcgcca ttcgagtttg ccgtcgatga ggaaaggctc tttggtgtag
     5041 tggcgcatac cgtgtccgac gacggtatcg acatcgtcgt gcaacaggcc tgcattcagc
     5101 aattcgcgga taacgaaagg cagtccgccc gctgcggtaa agtgattcac gtcggccttg
     5161 ccgttcggat aaacgcggat gagtagtggg atgatggagg aaatttcgtc gaagtcgtcc
     5221 cagttcaaaa tcacgccggc cgcacgcgcc atagcgacga ggtgcatggt gtggttggtc
     5281 gaaccgccgg ttgccatcag gccaatcaag gcgttgataa aggatttttc ggtcaacatt
     5341 tcgcccaaag gtttaatcgt gccgtttttg atgccgcgcg cgaggtgtcc ggcggcgtag
     5401 cgagtcagcg cttcgcgcag gtcggtgtaa gggtggacga aggcggcggc aggcaggtgc
     5461 acgcccatca tttccatcat catttggttg gagtttgccg tgccgtagaa agtgcaggtg
     5521 cccgggctgt ggtaagaacc catttcgctt ttcaaaagtt cgttgcgtcc gaccttgcct
     5581 tcggcgaaaa gctggcgggt gcgggctttt tctttgttgc cgataccgct ggacatcggg
     5641 cctgcgggga cgaagatacc cggaatatga ccgaacgaaa gcgcgcctat catcaaaccc
     5701 ggaacgattt tgtcgcatac gcccataaac aggctgccgt caaacatttg atgcgacagc
     5761 ccgacggcgg tactcatggc aatcacgtcg cgggagaaca gcgacagttc catgccggcg
     5821 tagccttgcg tgatgccgtc gcacatggcg ggcgtgccgc cggcgacttg ggcggtcgcg
     5881 ccgtttttct gcgcttcgtc tttgatttgg tcagggaagt ctttaaacgg ctggtgtgcg
     5941 gaaaccatgt cgttgtaggc ggtgatgatg cctaagttgg ggacggtttc ctgaagcatt
     6001 tcgattttga tacttttagg catggcagca tagccgtgtg ccaagttgct gcagccgagc
     6061 tggttgcgct ctaagcgtcc catttgtttg gcactgcgga tcttcgccag atatttttca
     6121 cgcgtcggac ggctgcgttc aataatgcgc ccggtgattt cggcgagttt ggagtggata
     6181 ggagtagtgt tcacggtcgg tctcctgtcg gaacgggggg tattggggat ttgtttgtgc
     6241 gtttctgatt tttgtatcgg gtattcagac ggtgagtata gtggattaac aaaaaccagt
     6301 acggcgttgc ctcgccttgc cgtattatct gtactgtctg cggcttcgtc gccttgtcct
     6361 gatttttgtt aatccactat attttaaaag gtataccgtc tgaaagtggg aagcgggtgt
     6421 tattatagta caaaatttgt aattttgtta caaaaaaatc agacatcgaa aagaaatttg
     6481 atttaaatcg cagaatcttc cgattgttgt aacggaatag gggaaacctg cccgattttt
     6541 ggactaggtc aaataaattg taaaaatggg aatagacaaa aagtgtagcg gtgtgtagta
     6601 ttactactca ttatgccgcc tgcctttgtt tccgatattg cgatgcagcg tgatggggga
     6661 aacaggtttc agacggcatc gaaaaattct ttcctgacga gataatacga tgagtacaca
     6721 aacaaatttt gatttggtgt tgttcggtgc gaccggcgat ttggcgatgc gcaagctgtt
     6781 gccctgtctg taccaggcgc atgttgccgg tctgcttcat cccgaagggc gtattttagg
     6841 ggtcagccgc agcgagttgg ataccgaagg ttttctggcg aaggtggaaa ccagttccaa
     6901 aatccatgtg aaagaaaatt tttccgatga ggcttgggca tcgtttgtcg aacgtctcgc
     6961 atatctcaaa gtcgatgtta cgcagccgga cgattttgcc gctttgggcg atttggtcaa
     7021 agcgcgcaaa gaaaccgaca atgtcgtcat ctatctttcc accgcgccga aattcttcgc
     7081 gcaaacatgt gaaaaccttg ccaaaatcgg tttgaacgcc gacaacgtgc gtgtggtttt
     7141 ggaaaaaccg ttgggtacgg atttggcttc ttcccagcaa atcaataccg atgttgcgcg
     7201 ttatttcaaa gaagggcaaa tttaccgcat cgaccactac cttggcaaag aaagcctgca
     7261 aaacctgctt gcgctgcgtt ttgccaatgt aatgttcgag ccgctgtgga acaataaata
     7321 catcgaaagc gtgcagttga ccatcgccga gcagttgggc gtggaagagc gcggcgagtt
     7381 ttacgacatt accggcgcgt tgcgcgatat ggtgcaaaac catttgatgc agatgctgtg
     7441 catgactgcg atggaagccc ccgccagctt ggatgccgac gcggtgcgcg atgaaaaagt
     7501 caaagtcatc aagtcattga agccgctgac cgtcgagtct gtcaatgaaa acgtcgtgcg
     7561 cggacaatat accgccgcca gaggcatgaa cggctatctt gaagaaatca acgttccgca
     7621 agacagcttt accgaaacct acgtcgccat taaagccgaa atcgaaaacg aacgctggaa
     7681 gggcgttccc ttctacctgc gtaccggcaa acgcatggcg ggcaaagtgg cggaaatcgt
     7741 tttgaacttc aaagatttga acagccatat ttttgaaggc agccgcaccg cgcccaaccg
     7801 gctcgttatc gagttgcaac catatgaatc cgtgcgcctc tatacgcaga tgaaaacccc
     7861 gggggcagga aataaggtcg aaaccgtgcc gctggcaacc gatttgggca aagcattgga
     7921 aagccgccgc gcggaagctt acgagcgcct gctgctggat gtgattaacg gcaaactcgc
     7981 tttgtttaac cgccgcgacg aactcgaagc cgcgtgggaa tatgtgatgc cgattttgga
     8041 aaactggaca aataacacca cgccgccgca cggctacggc gcacactcgt gggggcctga
     8101 agccgcgcgc gaactattgg cgcgcgacgg acacaagtgg cacgaagagc agtaatacaa
     8161 taatgcgttc agacggcatg gggtttgaaa tgccgtctga acgtaagtaa agcagt
//
LOCUS       DAWGKF010000087         8073 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.087, whole genome shotgun sequence.
ACCESSION   DAWGKF010000087 DAWGKF010000000
VERSION     DAWGKF010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8073)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8073)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8073
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.087"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            96..404
                     /locus_tag="WHR07_001331"
     CDS             96..404
                     /locus_tag="WHR07_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130541.1"
                     /translation="MTLKTDLLPKINNEDYQRLILKHSAEFSGGEIRLLNEILEKFNF
                     DVVQAQALAQAVMQQIRFDPNAYHIDSDDEDTTGICPHCINPPMPPLRDYLVWRETRG
                     "
     gene            486..1517
                     /gene="ruvB"
                     /locus_tag="WHR07_001332"
     CDS             486..1517
                     /gene="ruvB"
                     /locus_tag="WHR07_001332"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HEZ2130542.1"
                     /translation="MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQD
                     KAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVLER
                     AGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
                     LPPFTLIGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMSEEGA
                     EEIAKRSRGTPRIANRLLRRVRDFADVKNNGTIDGGIADAALSMLDVDAQGLDVMDRK
                     FLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFLQRTPRGRMATERAY
                     LHFGLPVEK"
     gene            complement(1540..2268)
                     /gene="rpe"
                     /locus_tag="WHR07_001333"
     CDS             complement(1540..2268)
                     /gene="rpe"
                     /locus_tag="WHR07_001333"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEZ2130543.1"
                     /translation="MTAYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVP
                     NLTFGPMVCAALKPYASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSL
                     SLIRDMGCQAGLVLNPATPVYLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRRV
                     RAMLDRYEAQSGRHIAIEVDGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIDAM
                     RAELEKSGRLNLAPMIEIEMPSEN"
     gene            2414..2848
                     /locus_tag="WHR07_001334"
     CDS             2414..2848
                     /locus_tag="WHR07_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HEZ2130544.1"
                     /translation="MPLPAPCRFAKPAASFLSMALLSCQLSHAATAYIPPNDFQPNCD
                     IRRLGLTQSQHNELRKIRTAFKMAGDRARLKVMHSEHSRRRSVVEIISSDVFNRNEAR
                     DYVESRYLSGMDFAVDELEIQHRFFHILTPQQQQMWLSSCLK"
     gene            complement(2861..3724)
                     /locus_tag="WHR07_001335"
     CDS             complement(2861..3724)
                     /locus_tag="WHR07_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEZ2130545.1"
                     /translation="MELNEFLDKAYAVLRRLDAVLPPEPGHTDWNALAFRWQSAGKKG
                     FLEHLPDPHTFPLVRLAGVGRQTELLVRNTEQFIVGRPANNVLMSGARGTGKSSLVKA
                     LLHEYADKGLRLIEVDKSDLIGLPYLLTLLKERPEKFIVFCDDLSFESGDETYKALKT
                     ALDGGLSQRCANVLVYATSNRRHLMPEYFDENAGTTGMRGEIHQKEAVEEKISLSDRF
                     GLWLSFYPFDQNDYLAAVQNWLEDFGVPYDETAQMAALQWAQTRGSRSGRSAWQFACD
                     WAGRLPKQRAL"
     gene            complement(3732..4349)
                     /locus_tag="WHR07_001336"
     CDS             complement(3732..4349)
                     /locus_tag="WHR07_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HEZ2130546.1"
                     /translation="MFTGIVQGLGKLTAIHRPSEAFHTYVVELPQEAADNLQRGASVA
                     NNGCCLTITEIEGNRVSFDLMAETLAKTNLGLLKEGDCVNIERAARFGDEIGGHVMSG
                     HIMATVPIVEIERDGFNRTVWFSLPHELKPYILTKGFVGLDGCSLTIGKVEDGRFNVH
                     LIPETLERTLFGSRKVGDRINIEIDPNTQAIVDTVERLMAQRYAK"
     gene            complement(4512..5126)
                     /locus_tag="WHR07_001337"
     CDS             complement(4512..5126)
                     /locus_tag="WHR07_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HEZ2130547.1"
                     /translation="MKTSNFSKRTSAMKTFALILADGQASRMGGEDKGLALLGGKALI
                     DHVIDRVRPQVSHIAISTNRNLEEYARRSPHIFPDARQWQHFGPLSALCTAANDLQLA
                     TADWLLVVPCDMPYLPGDLVARFETVSKRTPLCNAYYVETPITMHYNIMYIRPQILQS
                     AIPYLFSGMKTLRSWLQQQRARPVRFEFDGHFADLNTQIDLQEG"
     gene            5332..7104
                     /locus_tag="WHR07_001338"
     CDS             5332..7104
                     /locus_tag="WHR07_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite sensor histidine kinase"
                     /protein_id="HEZ2130548.1"
                     /translation="MILPARFSDGISLSLRLKLLTGVWVGLAALSVVLTLLLSLRLEN
                     AASVIEEAGNLRMQAYRLAYMAGEGSPRSQIDNQVDEFEKSLNRISQSDAIHPLIPSD
                     TPLAYDLIQSMLIIDWQAHILPPLQSYRRPTQVDLYRFAGNIELFLQALENANEKNTW
                     WLRRFQWAIMLMTLVSSVLMLFWHQIWVIRPLQALREGAERIGRRCFDIPVPEGGTPE
                     FKQVGRCFNQMGGRLKILYDDLEGQVAEQTRSLEKQNQNLTLLYQTTRDLHQSYIPQQ
                     AAEHFLNRILPAVGADSGRVCLDGESDVYVSIHHADCGTAASDLGKYHEEIFPIEYQN
                     ETLGRLLLSFSDGISLTGDDRTLLQTLIRQLGVSLASAKQEEEKRLLAVLQERNLIAQ
                     GLHDSIAQALTFLNLQVQMLETAFAENKREEAAENISFIKTGVQECYEDVRELLLNFR
                     TKISNKEFPEAVADLFARFTQQTGITVETAWENGSFLPPQEAQLQMIFILQESLSNIR
                     KHARATHVKFTLSEHGGRFTMTIQDNGQGFDTEKIGEPTGSHVGLHIMQERAKRIHAV
                     LEIRSQAQQGTTVSLTVASEESLK"
     gene            7101..7757
                     /locus_tag="WHR07_001339"
     CDS             7101..7757
                     /locus_tag="WHR07_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEZ2130549.1"
                     /translation="MTIKIILIDDHTLFRSGIKALLSRQHGFEVIGEAADGLSGIKMI
                     SRLQPDVVLLDLDMPGMNGREALSQIISINPQQAVIMLTVSEDSDDLTECIRIGARGY
                     LLKNINADFLLESIRKAAEGDNVFSPEMTAKLVKSLISPQPAQGTQALSSLTPRELEI
                     LGYLAAGHSNKIIARHLDLAESTVKVHVQNLLRKLNLSSRVQAAVYAIRHNVPQPVLE
                     "
BASE COUNT         1982 a         2369 c         1889 g         1833 t
ORIGIN      
        1 agttttgagg acgataccca atccaagctt tgcaacagcc gccgccatat ccgctataat
       61 tcacgcttca gccatcctgc ccccgacata aaatcatgac cctgaaaacc gatttattgc
      121 ctaaaatcaa caacgaagat tatcaacgcc tcatcctcaa acacagtgcg gaatttagcg
      181 gtggcgaaat ccgcctgttg aacgaaatcc tcgaaaaatt caatttcgac gttgttcagg
      241 cgcaggcatt ggcgcaagcc gtcatgcagc aaatccgctt cgaccccaac gcctaccaca
      301 tcgacagcga cgacgaagac accaccggca tctgccccca ctgcatcaac ccgcctatgc
      361 cgcccctgcg cgactatctc gtttggcgcg aaacccgcgg ataaaacgct tttgaccgtt
      421 atcttttcaa tgccgtctga aacgccgccg accgttcgga cggcataccc gacaaaggga
      481 acactatgct gcaaaccgac aacctgaccg ccgcgcaacc gcaacgcatc gttgccgccc
      541 aaaccgcctc cgcacaggaa gaactgctcg aacgcgccct ccgccccaaa acgctggacg
      601 actacatcgg gcaagacaaa gccaaagaac agcttgccat tttcatccaa gccgccaaaa
      661 aacgcggcga agcactcgac cacgttttgc tcttcggccc gcccggactg ggcaaaacca
      721 cactggcgca catcatcgcc aaagaattgg gcgtaaattt gcgccaaacc agcggccccg
      781 tcctcgaacg cgcaggcgac ctcgccgccc ttttgaccaa ccttgatccg cacgatgtat
      841 tgttcatcga cgaaatccac cgcctcagcc ctgttgtcga agaaatcctc tatcccgcgc
      901 tcgaagacta ccggctcgac attatgatag gcgaaggacc cgccgcccgt tccgtcaaaa
      961 tcgacctgcc gcccttcacg ctcatcggcg cgaccacccg cgccggtatg ctgaccaatc
     1021 cgttgcgcga ccgcttcggc atcgtctccc gccttgagtt ttacgaaaac cgagacctta
     1081 ccaccatcgt cagccgttcg gcacaactgt tgcagctcga tatgtccgaa gaaggcgcgg
     1141 aagaaatcgc caaacgcagc cgcggtacgc cgcgcatcgc caaccgcctg ttgcgacgcg
     1201 tgcgcgattt cgccgacgtg aaaaacaacg gcacaatcga cggcggcatc gccgatgccg
     1261 ctttaagtat gctggacgtg gacgcgcagg ggctggacgt gatggacagg aaatttctcg
     1321 aagccgtttt gcacaaattc ggcggcggcc cggtcggttt ggacaatgtt gccgccgcca
     1381 tcggcgaatc tacagacacc atcgaagacg ttatcgaacc ctaccttatc caacaaggct
     1441 tcctgcaacg caccccgcgc ggcaggatgg cgaccgaacg cgcctacctg catttcgggc
     1501 tgcccgtcga aaaataacgc aatgccgtct gaaacagagc taattttcag acggcatttc
     1561 tatttcaatc attggcgcaa ggttcagcct gccgcttttt tccagttccg ccctcatcgc
     1621 atcaatcacc gccttatagt ctggtttgcc gaaaatcgca gaaccggcaa caaaggtatc
     1681 cgcaccagct cgggcaacgg cggcaatatt gtcggttttg atgccgccgt ccacttcgat
     1741 ggcgatgtgc cgcccgcttt gtgcttcgta ccgatccagc atcgcccgca cccggcggat
     1801 tttttcaagg gtgtgcggga tgaagctttg tccgccgaat ccggggttga ccgacatcag
     1861 caaaaccata tccagcctgt ccaatacgtt ttccaacaga tatacgggcg ttgccggatt
     1921 caacaccagc cccgcctgac agcccatatc acgaatcagg ctcaagctgc ggtcgatatg
     1981 gcggctcgct tcgggatgaa aagtgataat cgatgctcct gctttggcaa acgactgaat
     2041 caggtcgtca acgggttcga ccatcagatg cacatcgatc ggcacgcttg cataaggctt
     2101 caacgccgcg caaaccatag ggccgaaggt caggttcggc acataatggt tgtccatcac
     2161 gtcaaaatgg atcagatctg cacctgccgc aatgacgctt tccacctctt ctccgaggcg
     2221 ggcaaagtct gccgacaaaa tactgggtgc gatacggtag gcggtcatat tttttccttc
     2281 aatgccttta cgggcggact caacgcggga aagccccgaa acagcattat taacaaaagt
     2341 taactgccat aataccatct ttcacacggc aatcaagtat attgtccgaa atatctggat
     2401 taaaggaaaa gccgtgccac tgcctgctcc ctgccgtttt gccaaacctg ccgcctcttt
     2461 tttaagtatg gctttgcttt cctgtcagct ttcccacgcc gccacggctt atatcccccc
     2521 gaacgatttt caaccgaact gcgacatacg ccgactcggg ctgacccaaa gtcagcacaa
     2581 tgagctgcgt aaaatccgca ccgccttcaa aatggcgggc gacagggcgc gtttgaaggt
     2641 tatgcattcc gaacacagcc gccgccggtc tgtcgtcgaa atcatttcct cggatgtttt
     2701 taatcggaac gaggcgcgcg attatgtcga aagccgctat ttgtccggta tggattttgc
     2761 ggtggacgaa ttggaaatcc aacaccggtt cttccatatc ctcacaccgc aacagcagca
     2821 aatgtggctt tcttcctgcc tcaaataatc cccgaaacgc tcacaacgcc cgttgtttcg
     2881 gcagcctgcc cgcccagtcg caggcaaact gccacgcgga acgtcccgaa cggctgcccc
     2941 gcgtctgcgc ccactgcaat gccgccatct gtgcggtttc atcatacggc acgccgaaat
     3001 cttccagcca attttgcacc gccgccagat aatcgttttg atcgaacgga taaaaactga
     3061 gccacaatcc gaatcggtcg gacagggata ttttttcttc caccgcttct ttctgatgga
     3121 tttccccccg catccccgtc gtaccggcat tctcgtcaaa atattcgggc atcaggtgcc
     3181 gtctgttgga agtcgcgtaa accaaaacgt tggcgcaacg ttgagacaga ccgccgtcta
     3241 acgcggtttt caatgcctta taggtttcat cgccgctttc aaacgacaaa tcgtcgcaaa
     3301 atacgataaa tttttccgga cgttccttca aaagcgtcaa caggtaaggc aggccgatta
     3361 aatcgctttt atcgacttcg atcaggcgca atcccttatc cgcatattcg tgtagcaggg
     3421 ctttgaccag cgaggatttg cctgttccgc gcgcgccgct catcaataca ttgttcgcgg
     3481 gtctgccgac aatgaactgt tcggtattac gcaccagcaa ttcggtttgc ctgccgactc
     3541 ccgccagcct taccaaggga aaggtgtgcg gatcgggcaa gtgttccaaa aaaccttttt
     3601 tgcccgcact ctgccagcgg aaggcaagcg cgttccaatc cgtatgcccg ggttcgggcg
     3661 gaagcacggc atccaaacgc cgcaaaacgg cataggcttt atcgagaaat tcgttcaatt
     3721 ccatctctgc ctcactttgc atatctttgc gccatcagcc gttcgacggt atcgacgatt
     3781 gcctgcgtat tcggatcgat ttcgatgttg atcctgtcgc cgacctttct gctgccgaac
     3841 agcgtccgtt ccaaagtttc gggaatcaga tggacattga aacggccgtc ttcgactttg
     3901 cctatggtca ggctgcaacc gtccaagccg acgaaccctt tggtcaggat atagggtttg
     3961 agttcatgcg ggagcgaaaa ccaaaccgtg cggttgaacc cgtcccgttc gatttcgaca
     4021 ataggcacgg ttgccataat gtgtccgctc atgacgtgtc cgccgatttc gtctccgaaa
     4081 cgcgccgccc gttcgatgtt gacgcaatcg ccttccttca gcagccccaa attggttttt
     4141 gccaaagttt ccgccattaa atcgaaactg acgcggtttc cttcgatttc ggtaatcgtc
     4201 aggcagcagc cgttattggc gaccgatgcg ccgcgttgca gattgtccgc cgcctcttgc
     4261 ggaagctcga cgacataagt gtgaaatgcc tccgacgggc ggtggattgc cgtcagtttt
     4321 cccaatcctt gaacaatgcc tgtaaacata atcctgtttc cctgtgtcgg taaaaatggt
     4381 gcaaattgta gcatctcccc gcgaaaaatg ccgtctgaaa tgccttcaga cagcattatg
     4441 cctccgattc gggcaaaaac cgcccggtat ggcttgacct ttcctttcca cgccggtcgg
     4501 cggtcttgcc cttatccctc ctgcaaatcg atttgcgtgt tcaagtcggc aaaatgcccg
     4561 tcaaactcga atctgaccgg ccgcgccctt tgctgctgca accagcttct taatgttttc
     4621 atacccgaaa acagataggg aatcgcgctt tgcagaatct gcgggcggat atacataatg
     4681 ttgtagtgca tcgttatcgg cgtttccaca taatacgcat tgcacaacgg tgtgcgtttc
     4741 gacacggttt caaacctcgc caccaaatcg cccggcagat acggcatatc gcacggcaca
     4801 accaaaagcc agtcggcagt cgccaactgc aaatcgttgg ctgcggtaca caatgccgaa
     4861 agcgggccga aatgctgcca ctgccgtgcg tccggaaaaa tatgcggact tcttcgagca
     4921 tattcttcca aattccggtt ggtgctgatg gcgatatggc tgacctgcgg cctgaccctg
     4981 tcgatgacat gatctatcag tgccttaccc cccaaaagag caagcccctt gtcctcgcct
     5041 cccatacggc tcgcctgacc gtcggccagt atcagggcaa aagttttcat tgcggatgtt
     5101 ctcttggaaa agttcgaggt tttcatgatt gcagtctgcc gttcccaatg actcaaaatg
     5161 ccgtctgaag cagacggcaa ataaattcat attatctgaa ttttatcata acatgattta
     5221 acactgaagc ggtacggatt atgttttcct taaccaattc tttctgagca gttgtatcta
     5281 atcccaaaga atgatattgt ttgcattatt tagaacaatt tttcgccgag catgatactg
     5341 ccagcccgtt tttcagacgg catcagcctt tccctacgcc tgaaactcct gaccggagtg
     5401 tgggtcgggt tggcggcatt gtctgtcgtt ttgacactgc tgctctcttt gcgtctggaa
     5461 aacgcggcct ccgtcatcga agaggcgggc aacttgagaa tgcaggcata ccgtctggca
     5521 tacatggcgg gtgaaggatc tccccgctcc caaatagaca atcaggttga cgaatttgaa
     5581 aaaagcctga atcgtatttc acaaagtgat gccatccatc cgctgattcc ttcggacacc
     5641 cctcttgctt atgatttgat acaatccatg ctgattatag attggcaggc acacatcctc
     5701 cccccgctcc agtcctaccg gcgaccgact caggtcgatc tctaccgctt tgccggaaac
     5761 atcgaactgt ttttgcaggc attggaaaat gccaacgaaa aaaacacatg gtggctcagg
     5821 cgttttcaat gggcaattat gttgatgacg ctggtgtcgt ctgtactgat gctgttttgg
     5881 caccagattt gggttatccg gccgctgcag gcgttaaggg aaggtgcgga acgcatcgga
     5941 cggaggtgtt tcgatattcc ggttcccgaa ggcggtacgc cggaattcaa acaggtcggg
     6001 cgttgtttca atcaaatggg cggcaggttg aaaattttat atgatgattt ggaaggacaa
     6061 gtcgccgagc agacacgcag tctcgaaaaa caaaatcaaa acctgaccct gctgtaccaa
     6121 actacacggg acctgcacca atcctacata ccgcaacagg ctgcagaaca ttttctaaac
     6181 cgtatcctgc ccgccgtagg agcagattcc ggcagagttt gtttggacgg cgaatccgat
     6241 gtttatgttt ccattcatca tgcggattgc ggcacagcag cttcggattt ggggaagtac
     6301 catgaggaaa tcttccccat tgagtaccag aacgaaacat tgggcaggct gttgctcagc
     6361 ttttcagacg gcatttccct caccggagac gaccgcacgc tgcttcaaac cctgattcgg
     6421 caattgggcg tatcgctcgc tagcgcgaag caggaagaag aaaaacgcct gcttgcagta
     6481 ttgcaggaac gcaacctgat tgcgcaagga ttacatgaca gcatcgcaca agcattaacg
     6541 ttcctaaacc tacaggtaca gatgctggaa accgcctttg ccgaaaacaa acgggaggaa
     6601 gccgcagaaa acatcagctt catcaaaaca ggcgtgcagg aatgttatga agatgtccgc
     6661 gaactgctgc tcaacttccg taccaaaatc agcaataaag aatttcccga agccgttgcc
     6721 gacctattcg cccgctttac gcaacaaacc gggataacgg tcgaaaccgc ctgggaaaac
     6781 ggttcgttcc tgccgcctca ggaagcgcag ctccaaatga tttttatcct gcaggaaagc
     6841 ctgtccaaca tccgcaaaca cgcccgcgcc acccatgtaa aattcaccct ttccgaacac
     6901 ggcggacgct ttaccatgac catccaagac aacggacaag gtttcgacac ggagaaaata
     6961 ggagaaccca cgggcagcca tgtcggactg cacatcatgc aggagcgtgc caaacgcatc
     7021 catgccgttt tagaaatccg ttcccaagct caacagggaa ccaccgtctc attgacggtt
     7081 gcatctgaag aaagcttgaa atgactatta aaattattct gatagacgac cataccctct
     7141 tccgcagcgg cattaaagcc cttttgtcgc gccaacacgg ttttgaagtc atcggcgaag
     7201 ccgcagacgg cctctcgggc atcaaaatga ttagtcggct gcaacccgat gtcgtcctgc
     7261 tcgatttgga tatgcccggc atgaacggac gcgaagcact ctcccaaatc atcagcatca
     7321 atccgcagca ggcagtgatt atgctgaccg tttccgaaga cagcgacgac ttgaccgaat
     7381 gtattcgcat cggcgcgcgc ggttacctgc tgaaaaacat caacgctgac tttctgctcg
     7441 aaagcatacg caaagccgcc gaaggcgata atgtattctc gcccgagatg accgccaaac
     7501 tcgttaaaag cctgatttcc ccccaacctg cccaagggac acaggcactc tcctcactta
     7561 cccctcgcga actggaaatc ttgggctatc tcgccgcagg acacagcaac aaaatcatcg
     7621 cccgccacct cgatcttgcc gaatccaccg tcaaagtcca cgttcaaaac ctgctccgca
     7681 aactcaacct cagcagccgg gtgcaggccg ctgtttacgc catccggcac aacgtccccc
     7741 aacccgtgct ggaataaggc gggttcagac ggcatattag gggttttaat ccccgtacgg
     7801 tcattcggat aacagaccaa gcatgtaagt ttatgccccc ataagtacgc ttggcatagc
     7861 agtaatattg ttcggtttag tgttttccgt ttgcccctat ctgatactgc aatatcagct
     7921 atgccgtctg aaaacgtatc atcatgatat tttcagacgg cataataaaa agcggaaata
     7981 ctaatgcggg gtaaaatgtt ccattccgaa tcccataaat atacaatggc ttatatcgtt
     8041 taagcatgtg taacccaccc tcatatcaat caa
//
LOCUS       DAWGKF010000088         8059 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.088, whole genome shotgun sequence.
ACCESSION   DAWGKF010000088 DAWGKF010000000
VERSION     DAWGKF010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8059)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8059)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8059
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.088"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..379)
                     /locus_tag="WHR07_001340"
     CDS             complement(<1..379)
                     /locus_tag="WHR07_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130550.1"
                     /translation="MMYSFEANANAVKISETVSVDTGQGAKIHKFVPKNSKTYSSDLI
                     KTVDLTHIPTGAKARINAKITASISRAGVLAGGGKLARLGAKFSTRAVPYVGTALLAH
                     DVYETFKEDIQARGYQYDTETDKF"
     gene            complement(363..680)
                     /locus_tag="WHR07_001341"
     CDS             complement(363..680)
                     /locus_tag="WHR07_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1132 family protein"
                     /protein_id="HEZ2130551.1"
                     /translation="MNKPFITQAQLALYKYQPSSKYFGQSMAVIAQSEFVEFAKINKS
                     ENVIDCFSFFWNRRIKHDIWLISFSDNSEMVIKESLKDGHKIYKFEFCEIVDNCNFDD
                     VFV"
     gene            complement(808..1086)
                     /locus_tag="WHR07_001342"
     CDS             complement(808..1086)
                     /locus_tag="WHR07_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130552.1"
                     /translation="MYYQVGNKCLEKHQAENLYFSLVVPRIKENGQIVRPKYNGSLWK
                     MSDGQPLRLLLAECSLKDNLQSGLETGWIVFGILASVYFVSLLKKVLK"
     gene            complement(1093..1377)
                     /locus_tag="WHR07_001343"
     CDS             complement(1093..1377)
                     /locus_tag="WHR07_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130553.1"
                     /translation="MFGGRLKNAPSITAKHFLKENIMKFINTCRKYGAKLAVVTAAPL
                     ALAAHANATLPDTAKNALEAAKADGMEAGWIVVGVFAALFVFSIVKRVMK"
     gene            complement(1385..1582)
                     /locus_tag="WHR07_001344"
     CDS             complement(1385..1582)
                     /locus_tag="WHR07_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130554.1"
                     /translation="MQKVYVVQSVSTGDFLYLSPETGDIGHTKLITNADYFYDFEEAI
                     NAGLEEIGNQYEFVVFGFLKD"
     gene            complement(1587..1877)
                     /locus_tag="WHR07_001345"
     CDS             complement(1587..1877)
                     /locus_tag="WHR07_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130555.1"
                     /translation="MNIQLQGHIVGVKKFNGQIEGKSFDYCRLIVATPLDSSQGNALG
                     SSTTEYDFGGSANFEQFRNAQFPIEANLNVEIVTTGKTQKLKVIGFQLVKKG"
     gene            complement(1922..3264)
                     /locus_tag="WHR07_001346"
                     /pseudo
     CDS             complement(1922..3264)
                     /locus_tag="WHR07_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
     gene            complement(3349..3564)
                     /locus_tag="WHR07_001347"
     CDS             complement(3349..3564)
                     /locus_tag="WHR07_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130556.1"
                     /translation="MAGATIRIIDRQTDEVIAKKTIYVFEKGLDGTGGARMPWKFAIL
                     CNKERLTSSEPLSDFVLSVLKPYILRP"
     gene            complement(3852..4205)
                     /locus_tag="WHR07_001348"
     CDS             complement(3852..4205)
                     /locus_tag="WHR07_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130557.1"
                     /translation="MFTTNDLRHFLEGLAILFSIGYWGTMLLLLWFLVRFAYKKPKRN
                     PGKILSGSLTAAAILMLFVWIIPKQFGPIKEEIQAQEEWDRKYKEAEAVFNEQCKTAG
                     ERFTRRRTMWKGLCC"
     gene            4441..5868
                     /locus_tag="WHR07_001349"
     CDS             4441..5868
                     /locus_tag="WHR07_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HEZ2130558.1"
                     /translation="MFFSALKSFLSRYITVWRNVWAVRDQLEPPKRTAEEQAFLPAHL
                     ELTDTPVSAAPKWAARFIMAFALLALLWSWFGKIDIVAAASGKTVSGGRSKTIQPLET
                     AVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALES
                     RTVPHIDMAQARSLGLSDADVQSAQVLAQHQYQAWAAQDAQLQSALRGHQAELQSAKA
                     QEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQ
                     AAIAQAEQSRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGT
                     VQELATYTVGGVVQAAQKMMVVAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPY
                     TRYGYLTGKVKSVSHDAVSHEQLGLVYTAVVSLDKHTLNIDGKAVNLTAGMNVTAEIK
                     TGKRRVLDYLLSPLQTKLDESFRER"
     gene            5937..7340
                     /locus_tag="WHR07_001350"
     CDS             5937..7340
                     /locus_tag="WHR07_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEZ2130559.1"
                     /translation="MTLLNLMIMQDYGISVCLTLTPYLQHELFSAMKSYFSKYILPVS
                     LFTLPLSLSPSVSAFTLPEAWRAAQQHSADFQASHYQRDAVRARQQQAKAAFLPHVSA
                     NASYQRQPPSISSTRETQGWSVQVGQTLFDAAKFAQYRQSRFDTQAAEQRFDAAREEL
                     LLKVAESYFNVLLSRDTVAAHAAEKEAYAQQVRQAQALFNKGAATALDIHEAKAGYDN
                     ALAQEIAVLAEKQTYENQLNDYTDLDSKQIEAIDTANLLARYLPKLERYSLDEWQRIA
                     LSNNHEYRMQQLALQSSGQALRAAQNSRYPTVSAHVGYQNNLYTSSAQNNDYHYRGKG
                     MSVGVQLNLPLYTGGELSGKIHEAEAQYGAAEAQLTATERHIKLAVRQAYTESGAARY
                     QIMAQERVLESSRLKLKSTETGQQYGIRNRLEVIRARQEVAQAEQKLAQARYKFMLAY
                     LRLVKESGLGLETVFAE"
     gene            complement(7504..>8059)
                     /locus_tag="WHR07_001351"
     CDS             complement(7504..>8059)
                     /locus_tag="WHR07_001351"
                     /inference="COORDINATES: protein motif:HMM:NF024751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ2130560.1"
                     /translation="GDNAQKKTTTYKEQDPAKVTHYLTQPAEFSDYQRVYLDETGFDR
                     YLFRPYARSLKGQIVKAQISGKRYQRLSLVSAQVGNRLIAPMVYQNTMTGVFFEAWFQ
                     QCLLPALTQKSVIILDNARFHRMGVLREMAEKLGHKVLPLAPYSPELNPIEKVWANIK
                     RYLRTVLSDYARFDDALLSYFDFN"
BASE COUNT         2034 a         1904 c         1970 g         2151 t
ORIGIN      
        1 caaatttgtc ggtttcggtg tcgtattggt agcctcgtgc ctgtatgtct tctttgaaag
       61 tttcgtatac gtcatgggct aaaagggctg ttccgacata gggaaccgcc cttgtgctga
      121 atttcgcgcc taagcgggca agtttgccgc cccccgccaa tacgccggcg cgggaaatgc
      181 tggcggttat tttggcgttg attcgggctt ttgcgcccgt agggatgtgt gttaaatcta
      241 ccgtttttat taaatcagat gaataagttt tactattttt aggtacaaac ttatgaattt
      301 tcgcaccttg tccggtatca actgaaacag tttcagatat ttttactgca tttgcattcg
      361 cttcaaacga atacatcatc aaaattgcaa ttatcgacaa tttcgcaaaa ttcaaatttg
      421 tatattttat gaccatcttt cagggattct ttaattacca tttctgaatt atcagaaaat
      481 gagattagcc aaatatcatg tttaattctt ctattccaga aaaaagagaa acaatcaata
      541 acattttcag acttattaat cttcgcaaat tcaacaaatt cagattgcgc tataaccgcc
      601 atcgattgcc caaaatactt gctagacggc tgatatttat aaagtgccaa ctgcgcctga
      661 gtgataaacg gcttgttcat ggttctgcct ttcaaaggtt tttttgaaag cctgattttg
      721 acaccataac ttcatgcgct caattcttaa acagaaccgc cccgattaat acgggtacgg
      781 aaacgccgag ataaaaataa aaatccatca tttcaaaacc tttttcagca gggaaacaaa
      841 gtaaacggac gcgaggatgc cgaatactat ccagcctgtt tcaaggccgc tttgcaggtt
      901 gtctttcaga ctgcattccg ccaataaaag ccttagcggc tgaccgtccg acatcttcca
      961 caggctgccg ttatatttcg gcctgacaat ctgtccgttt tctttgattc ttggtactac
     1021 caagctgaaa taaaggtttt cagcctggtg cttctcaaga catttatttc cgacttggta
     1081 gtacatgccg tcttacttca tcactctctt aacgatggaa aatacaaaaa gcgcggcgaa
     1141 aacgccaacg acaatccaac cggcttccat accgtccgct tttgcggctt ccaaagcgtt
     1201 ttttgctgta tcgggcaacg ttgcatttgc atgtgcggcc aaagccaggg gagcagctgt
     1261 tacaacagcc agttttgcgc cgtatttacg gcaggtgtta ataaatttca tgatattttc
     1321 cttcaaaaag tgtttggcgg taatggatgg agcgtttttc agacgaccgc cgaacatccg
     1381 aaaatcagtc tttcaaaaat ccgaatacga caaattcgta ttggttgccg atttcttcca
     1441 aacctgcgtt aatcgcttct tcgaagtcgt agaaataatc ggcattggtg attaatttgg
     1501 tatgtccgat gtcgcccgtt tcaggagaga gatacagaaa gtcccctgtt gatacggact
     1561 ggacaacata gactttctgc attcaatcag cctttcttca cgagttgaaa accgatgact
     1621 ttcagttttt gggttttgcc cgtagtaacg atttccacgt tcaggtttgc ttcgatggga
     1681 aattgggcgt ttcggaactg ctcgaaattg gcagagccgc cgaaatcgta ttcagtagta
     1741 gagctgccca atgcgttgcc ttgggagctg tctaagggtg tggcgacaat caggcggcaa
     1801 tagtcgaagc tcttgccttc gatttgtccg ttgaattttt taacgccgac gatgtggcct
     1861 tgaagttgga tgttcatttt ttggtttcct tgtgtgatta aacgtctttc gggcagacac
     1921 tttaagccca tgaaatcggt agtcttgcga atttgtcgta aatgaagttg ttatagcttt
     1981 cttcattgtt gacgtgtttt tgctgttcaa gctgtttttc aagattctcg taatattcgt
     2041 acatatagta agggtctttg tacggtttga atgcgggctg ttcatgaatg gcttgagctt
     2101 tcaaaaaggc gcagtcgtag gcttcgggag ccaaagactt gggcagcttg tgatgactcg
     2161 gctcaatcag ttcaaacagt ttggctttgt ccaattcggg aaaaatgaat ttcagaccgt
     2221 ttgccgcacg tccgaactgt ttttttaccc attcaaggta gcggtcggct gaaatgacct
     2281 tatcttcctt aaccgcgtgt atgcgcgttg ccttttgggc gaatcgttcg caaatcggat
     2341 atgcgccgcc gaaatattcg cccggattct gcaaaacttc gaaagggata acgatgtctt
     2401 ttgctttgaa ttcaatttca aagcgcgtcc atgtgcttgt tttatcgccc aactgcttgc
     2461 ctttttcata gacgcggaca tatttggacg attcacggga gccgatacca taggtcttgc
     2521 ctttggtcat tttggcttca tcgtcttctt cccaatctga ccccaaacat tcgccttttg
     2581 gtttgacgtg atgacaggta aacatacctt tatttcggtc ttcacgggct tggttcgggc
     2641 tgtattcgcc gttgaaaaag tcttttgcga tgtcaacgcg tgtgattttt gggcggattg
     2701 cattagtcag gaatgcgaaa agtcgtgatt cccagccttc ttttgcgacg ccgcaaccgg
     2761 tgccggtcag ttcgaaaagg atggtattgt tttgtccgcc aaaatggacg cgaccgtata
     2821 ggacgtcttc cgaacccatc aaccaacagc gctcatagaa acgaccgccc gagcctttgg
     2881 attctttgta gatacagaaa ccgaaaactt cttcggcgag catggacgcg gcgcgaataa
     2941 aatcttcgtc ttccaaaaga cttacacgaa cgccgtattt atcgaaaaag gttttttcat
     3001 gaaatgaaaa gctaatttga tcgatgaacg ccgaatcaga tacaccgcga cgaagcggaa
     3061 cgcctaaaag gtttcctttg ccgtctgtta tgtacttttc ataacactcg aagacttctt
     3121 gaaccctgcc cgccgtttcg gtttctgtac ccccctgtta gataaggggg gaagatttga
     3181 agcggttgcc ggcttcctgc cgtccgatga cgcgtccgtc atcacgccgg caaccgcctt
     3241 tttcatccct tgcttatctt ccatggtgcg aatcctcaaa aacgggcaaa aaaaagccct
     3301 gttacttgta gaaagtaaag gacgttaatt tttgttaatc gtcccttctt agggacgcaa
     3361 tatataaggt tttaaaacgc taagaacaaa atccgataac ggctctgaag aagtaagtct
     3421 ttctttattg cacaagatag caaacttcca cggcattctc gccccacccg tgccgtccaa
     3481 gcctttttca aagacataga tggttttctt ggcaatcact tcgtcagttt ggcggtcgat
     3541 aatccgtatg gtcgcacctg ccacccagtg cctgcgcagc ttggaatcga cattgttttc
     3601 gaacgttacc gcataacggg cggggtgtat atgattaaat atttgattta tcggaaaatc
     3661 tttacctgaa taccgaataa tatcggaatg gttgggttgc aggacatcca catagcggta
     3721 ttccccatcg ctaaaaaatc ctaggaaacg agcaataaaa tttacgcctt cgctggtctg
     3781 taaagccgca ttgtcccaca tcgggtctct ggtttttgca tctgccgaaa cggtacgctc
     3841 aggtactacc ttcaacagca taatcccttc cacattgtcc gccgtctggt aaatctttcc
     3901 cccgccgttt tgcattgttc gttaaacacg gcttcggctt ctttgtattt tctgtcccac
     3961 tcttcttgtg cctgtatttc ttctttgatc gggccgaatt gtttgggaat aatccaaaca
     4021 aacagcatca ggatagcggc ggcggtcagg ctgcctgaaa ggattttgcc ggggttccgt
     4081 ttgggctttt tataggcaaa gcggacgaga aaccaaagca acagcagcat ggtgccccaa
     4141 tagccgattg agaataggat ggccaaacct tctaggaaat ggcgtaaatc gtttgtggta
     4201 aacatgggtt gttcctgtgg ttaaatgtgc aggctgcttt ttgccgaacc ttgccgcatc
     4261 tcaaaagcag cctgcgcttc agcgttgcgt tacgcagtaa aataatgaat atttgtaacg
     4321 acttgggtat tttttgtcaa tattccagcc tttcccttaa cagctgccgc gctttccgtt
     4381 aaaattcctt tacatattta tattgtttcc tgtttctata ttgccaaggt tatacccgtt
     4441 atgtttttct ccgccctgaa atcctttctt tctcgataca ttactgtatg gcgcaatgtt
     4501 tgggcggtgc gcgaccagtt ggaaccgccc aaacgcacgg cggaagaaca ggcgtttttg
     4561 cccgcgcatt tggaactgac cgatacgccg gtctctgccg ctccgaaatg ggcggcgcgt
     4621 tttattatgg cgtttgcgct tttggctttg ttgtggtcct ggttcggcaa aatcgatatt
     4681 gtggcggcgg cttcgggcaa aacggtgtcg ggcgggcgca gcaaaaccat ccagccgctg
     4741 gaaacggcgg tggttaaggc ggtacatgtg cgcgacgggc agcatgtgaa acagggagaa
     4801 acgctggcgg aactggaggc tgtgggaaca gacagcgatg tggtgcagtc ggagcaggct
     4861 ttgcaggctg cccaattgtc caaactgcgt tatgaagcgg tattggcggc attggaaagc
     4921 cgtaccgtgc cgcatatcga tatggcgcaa gcacggtctt taggtctctc cgatgccgat
     4981 gtgcaatcgg cgcaggtgtt ggcgcagcac cagtatcagg catgggcggc gcaggatgcg
     5041 caattgcagt cggctttgcg cggccatcag gcggaattgc agtcggccaa ggcgcaggag
     5101 cagaagctgg tttcggtggg ggcgatcgag cagcagaaaa cagcagacta ccgccgtttg
     5161 cgggccgaca attttatttc ggaacatgcg tttttggagc agcagagcaa atcggtcagc
     5221 aattggaacg atttggaaag tacgcgcggt cagatgaggc agattcaggc ggccattgca
     5281 caggcggagc agagtcgggt gctgaatacg cagaacctga aacgcgatac gctggatgcg
     5341 ctgcgccagg caaacgaaca gattgaccaa taccgcggcc aaacggataa ggcaaagcag
     5401 cggcagcagc tgatgacaat acagtcgcct gcggacggca cggtgcagga attggccacc
     5461 tatacggtgg gcggtgtggt gcaggctgcc caaaaaatga tggtggttgc gcccgatgac
     5521 gacaaaatgg acgtggaagt tttggtattg aacaaagaca tcggttttgt ggaacaggga
     5581 caggatgcgg tggtgaagat tgagagtttt ccctatacgc gctacggtta tctgacgggc
     5641 aaggtgaaaa gtgtcagcca tgatgcggta agccacgaac agttgggctt ggtttatacg
     5701 gcggtggtgt cgctggacaa acataccttg aatattgacg gcaaagcagt gaatctgacg
     5761 gcgggcatga atgtcacggc ggagattaaa acgggtaaac ggcgggtgct ggattatctg
     5821 ttaagcccgc tgcaaaccaa attggacgaa agctttaggg agcgataggc ggatccgtac
     5881 tgggcatttg ttatccgccg gttcggacat gcagactgcc tgaaaccatt gcccggatga
     5941 cattgctcaa tctaatgata atgcaagatt acggtatttc cgtttgcctg acactgacgc
     6001 cctatttgca acatgaacta ttttcggcta tgaaatccta tttttccaaa tatatcctac
     6061 ccgtttcact ttttaccttg ccactatccc tttccccatc cgtttcggct tttacgctgc
     6121 ctgaagcatg gcgggcggcg cagcaacatt cggctgattt tcaagcgtcc cattaccagc
     6181 gtgatgcagt gcgcgcacgg caacaacaag ccaaggccgc attccttccc catgtatccg
     6241 ccaatgccag ctaccagcgc cagccgccat cgatttcttc cacccgcgaa acacagggat
     6301 ggagcgtgca ggtgggacaa accttatttg acgctgccaa atttgcacaa taccgccaaa
     6361 gcaggttcga tacgcaggct gcagaacagc gtttcgatgc ggcacgcgaa gaattgctgt
     6421 tgaaagttgc cgaaagttat ttcaacgttt tactcagccg agacaccgtt gccgcccatg
     6481 cggcggaaaa agaggcttat gcccagcagg taaggcaggc gcaggcttta ttcaataaag
     6541 gtgctgccac cgcgctggat attcacgaag ccaaagccgg ttacgacaat gccctggccc
     6601 aagaaatcgc cgtattggct gagaaacaaa cctatgaaaa ccagttgaac gactacaccg
     6661 acctggatag caaacaaatc gaggccatag ataccgccaa cctgttggca cgctatctgc
     6721 ccaagctgga acgttacagt ctggatgaat ggcagcgcat tgccttatcc aacaatcatg
     6781 aataccggat gcagcagctt gccctgcaaa gcagcggaca ggcgcttcgg gcagcacaga
     6841 acagccgcta tcccaccgtt tctgcccatg tcggctatca gaataacctc tacacttcat
     6901 ctgcgcagaa taatgactac cactatcggg gcaaagggat gagcgtcggc gtacagttga
     6961 atttgccgct ttataccggc ggagaattgt cgggcaaaat ccatgaagcc gaagcgcaat
     7021 acggggccgc cgaagcacag ctgaccgcaa ccgagcggca catcaaactc gccgtacgcc
     7081 aggcttatac cgaaagcggt gcggcgcgtt accaaatcat ggcgcaagaa cgggttttgg
     7141 aaagcagccg tttgaaactg aaatcgaccg aaaccggcca acaatacggc atccgcaacc
     7201 ggctggaagt aatacgggcg cggcaggaag tcgcccaagc agaacagaaa ctggctcaag
     7261 cacggtataa attcatgctg gcttatttgc gcttggtgaa agagagcggg ttagggttgg
     7321 aaacggtatt tgcggaataa agcaggctga aacggttatg aaattcccaa agcagcctgc
     7381 accccgtttc gaaagtgcag gctgctttgg gattgatccg atactttcac attctcattg
     7441 cctttaaata aagcacagtt aaaaacacat ttaaattaag tgcgaattaa ttcaaatgta
     7501 tattcaatta aaatcaaaat aggacagtag tgcatcgtca aatcgggcgt aatcagacaa
     7561 aacggttcgc agataccgct taatattcgc ccacactttc tcaatcgggt tgagctcagg
     7621 tgaataaggt gcaagaggca ataccttatg tcccaatttt tccgccattt cccgtaagac
     7681 acccatacgg tgaaatcgcg cattatctaa aataatcacc gatttttgag tcaatgcggg
     7741 cagtaggcat tgctgaaacc acgcttcaaa aaagactccg gtcatcgtat tttgataaac
     7801 catcggagca atcagccggt tgccgacttg tgcggacacc aaagataagc gttggtatct
     7861 ttttccactt atctgcgctt tcactatttg ccctttcagg ctgcgggcat agggacggaa
     7921 caggtagcgg tcaaatcctg tttcatccaa ataaacacgt tggtagtcgg aaaattcggc
     7981 cggctgtgtc aaataatgcg ttactttggc cgggtcttgt tctttgtaag tggtggtctt
     8041 tttttgcgcg ttatcccca
//
LOCUS       DAWGKF010000089         8046 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.089, whole genome shotgun sequence.
ACCESSION   DAWGKF010000089 DAWGKF010000000
VERSION     DAWGKF010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8046)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8046)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8046
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.089"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(79..1425)
                     /gene="mnmE"
                     /locus_tag="WHR07_001352"
     CDS             complement(79..1425)
                     /gene="mnmE"
                     /locus_tag="WHR07_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEZ2130561.1"
                     /translation="MSDNVPTIAAVATAPGRGGVGVIRISGKNLLPMAEALCGKTPKP
                     RVATYADFTDADGQAIDSGLLLFFAAPASFTGEDVIELQGHGGPVVMDMLLNRCLELG
                     ARLAEPGEFTKRAFLNDKLDLAQAEGVADLIDASSRSAARLALRSLKGDFSRRIHGLV
                     EDLITLRMLVEATLDFPEEDIDFLEAADARGKLDGLRRAVDDVLANAQQGAILREGLN
                     VVLVGAPNVGKSSLLNALAGDEVAIVTDIAGTTRDAVRERILIDGVPVHIVDTAGLRE
                     TDDVVERIGIERSRKAVSEADVALVLVDPREGVNDKTRAILDALPPELKRIEIHSKSD
                     LHAHAAGGFGTGAETVIALSAKTGDGLDALKRTLLREAGWQGEGEGLFLARTRHVNAL
                     KAAQEELSLAALCGNHQIELFAEHLRLAQVACGEITGEFTADDLLGVIFSRFCIGK"
     gene            1556..1711
                     /locus_tag="WHR07_001353"
     CDS             1556..1711
                     /locus_tag="WHR07_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130562.1"
                     /translation="MEKRNTYAFLLGIGSLLGLFHPAKTAIRPNPADDLKNIGGDFQR
                     AIEKARK"
     gene            1708..2139
                     /locus_tag="WHR07_001354"
     CDS             1708..2139
                     /locus_tag="WHR07_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2335 domain-containing protein"
                     /protein_id="HEZ2130563.1"
                     /translation="MTENAQDKARQAVETVVKSPELVEQILSDEYVQIMIARRFHSGP
                     LPPPSDLAQYNDIISNGADRIMAMAEKEQAVRHETIRQDQTFNRRGQLYGFISVILIL
                     LFAVFLVWSGYPATAASLAGGTVVALAGAFVIGRSRDQGKN"
     gene            2273..6637
                     /gene="app"
                     /locus_tag="WHR07_001355"
     CDS             2273..6637
                     /gene="app"
                     /locus_tag="WHR07_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_168458961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesion and penetration autotransporter App"
                     /protein_id="HEZ2130564.1"
                     /translation="MKTTDKRTTETHRKAPKTGRIRFSPAYLAICLSFGILPQAWAGH
                     TYFGINYQYYRDFAENKGKFAVGAKDIEVYNKKGELVGKSMTKAPMIDFSVVSRNGVA
                     ALVGDQYIVSVAHNGGYNNVDFGAEGSNPDQHRFTYKIVKRNNYKAGTNGHPYGGDYH
                     MPRLHKFVTDAEPVEMTSYMDGRKYIDQNNYPDRVRIGAGRQYWRSDEDEPNNRESSY
                     HIASAYSWLVGGNTFAQNGSGGGTVNLGSEKIKHSPYGFLPTGGSFGDSGSPMFIYDA
                     QKQKWLINGVLQTGNPYIGKSNGFQLVRKDWFYDEIFAGDTHSVFYEPRQNGKYSFHD
                     NNNGTGKIDAKHEHNSLPNRLKTRTVQLFNVSLSETAQEPVYHAAGGVNSYRPRLNNG
                     ENISFIDEGKGELILTSNINQGAGGLYFQGDFTVSPENNETWQGAGVHISEDSTVTWK
                     VNGVANDRLSKIGKGTLHVQAKGENQGSISVGDGKVILDQQADENNKKQAFSEIGLVS
                     GRGTVQLNADNQFNPDKLYFGFRGGRLDLNGHSLSFHRIQNTDEGAMIVNHNQDKEST
                     VTITGNKDIATTGNNNSLDSKKEIAYNGWFGEKDTTKTNGRLNLVYQPAAEDRTLLLS
                     GGTNLNGNITQTNGKLFFSGRPTPHAYNHLNDHWSQKEGIPRGEIVWDNDWINRTFKA
                     ENFQIKGGQAVVSRNVAKVKGDWHLSNHAQAVFGVAPHQSHTICTRSDWTGLTNCVEK
                     TITDDKVIASLTNTDISGNVSLADHAHLNLTGLATLNGNLSANGDTRYTVSHNATQNG
                     DLSLVGNAQATFNQATLNGNTSASGNASFNLSDHAVQNGSLTLSGNAKANVSHSALNG
                     NVSLADKAVFHFESSRFTGQISGSKDTALHLKDSEWTLPSGTELGNLNLDNATITLNS
                     AYRHDAAGAQTGSATDAPRRRSRRSLLSVTPPASVESRFNTLTVNGKLNGQGTFRFMS
                     ELFGYRSDKLKLAESSEGTYTLAVNNTGNEPASLEQLTVVEGKDNKPLSENLNFTLQN
                     EHVDAGAWRYQLIRKDGEFRLHNPVKEQELSDKLGKAEAKKQAEKDNAQSLDALIAAG
                     RDAVEKTESVAEPARQAGGENVGIMQAEEEKKRVQADKDTALAKQREAETRPATTAFP
                     RARRARRDLPQLQPQPQPQPQRDLISRYANSGLSEFSATLNSVFAVQDELDRVFAEDR
                     RNAVWTSGIRDTKHYRSQDFRAYRQQTDLRQIGMQKNLGSGRVGILFSHNRTENTFDD
                     GIGNSARLAHGAVFGQYGIDRFYIGISAGAGFSSGSLSDGIGSKIRRRVLHYGIQARY
                     RAGFGGFGIEPHIGATRYFVQKADYRYENVNIATPGLAFNRYRAGIKADYSFKPAQHI
                     SITPYLSLSYTDAASGKVRTRVNTAVLAQDFGKTRSAEWGVNAEIKGFTLSLHAAAAK
                     GPQLEAQHSAGIKLGYRW"
     gene            complement(6746..7468)
                     /locus_tag="WHR07_001356"
     CDS             complement(6746..7468)
                     /locus_tag="WHR07_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ2130565.1"
                     /translation="MFPDKYKLSLKENIFLAKKVLVAQIHNLSRFENCQTTLLQTEQI
                     IHGKNVASVSLEDIQTILNLKRAYQYVISHISNGEPVNISLLKKINNIVAKDDSLAPG
                     DFRTGSVGVTLLDGSRHAPNPVKEIEVARVLQNIGLQSGSTTEAAVRFMLYCMRQQVF
                     WDGNKRTATLFANGLMMAGGCGILEISEMQMPQFNEKLSAFYRSGDDTDISKFVYQNC
                     ISGIDYFGTHEDIDFPDPPNMG"
BASE COUNT         2131 a         2227 c         1948 g         1740 t
ORIGIN      
        1 aaccaaacgg atcggattcc cgtttttatg ggataacgga atgttcagcc ggacaccgcc
       61 acgatgcttt cgatccgttt attttccgat acaaaacctc gaaaaaatca cgccgagcag
      121 gtcgtccgcc gtaaactcgc ccgtgatttc gccgcatgcg acctgcgcca agcgcaagtg
      181 ttcggcaaac agctcgattt gatggttgcc gcacaatgcc gccagcgaca attcttcctg
      241 cgctgctttg agtgcgttga cgtgccgcgt ccgcgccaaa aacagccctt cgccctcgcc
      301 ctgccatccg gcctcgcgca acaacgtccg tttcagcgcg tccaagccgt cgccggtttt
      361 cgccgacagc gcgatgacgg tttccgcgcc cgtaccgaac ccgcctgccg cgtgtgcgtg
      421 caaatcggat ttgctgtgga tttcgatgcg tttcaactcc ggcggcaacg cgtccaaaat
      481 cgcccgtgtc ttgtcgttca cgccttcgcg cggatcgacc aacaccagcg cgacatcggc
      541 ttcggatacg gctttgcggc tgcgttcgat gccgatgcgt tcgaccacgt cgtccgtctc
      601 gcgcaaacct gccgtatcga caatatgcac cggaacgccg tcaatcagga tacgttccct
      661 gaccgcgtcg cgcgtcgttc cggcaatatc ggtaacaatc gccacttcgt cgcccgccag
      721 cgcgttcaac aggctggatt tgccgacatt cggcgcgccg accaatacga cattcagacc
      781 ttcgcgcaaa atcgcgccct gctgcgcgtt ggcaagcaca tcatccacgg cgcggcgcaa
      841 gccgtccagt ttgccgcgtg cgtctgccgc ttcgagaaaa tcaatgtctt cctcgggaaa
      901 atctaacgtc gcttcgacca gcatccgcaa ggtaatcaag tcttcgacca gaccgtgtat
      961 ccgccgcgaa aaatcgcctt tgagcgagcg caacgccaga cgcgccgccg aacggctgga
     1021 tgcgtcaatc aaatccgcca cgccttccgc ctgtgccaag tccagtttgt cgtttaaaaa
     1081 cgcacgcttc gtaaactcgc ccggttcggc aaggcgcgcg cccaattcca aacagcggtt
     1141 cagcagcata tccatcacta ccggcccgcc gtgtccctga agctcgataa catcttcgcc
     1201 cgtaaaactt gccggtgcgg caaaaaaaag caaaagcccg ctgtcgattg cctgaccgtc
     1261 cgcgtccgta aaatcagcat aggttgccac gcgcggcttg ggcgttttcc cacacaaagc
     1321 ctctgccatc ggcagcaggt ttttccccga tatgcgtatc acgcccacgc cgccgcgccc
     1381 gggtgcggta gcgactgccg caatcgttgg aacgttatcc gacataaaac ccccgaaaat
     1441 tcaaaacagc cgcgattata gcaaatgccg tctgaagtcc gacggtttgg ctttcagacg
     1501 gcataaaacc gcaaaaatgc ttgataaatc cgtccgcctg acctaatata accatatgga
     1561 aaaacgaaac acatacgcct tcctgctcgg tataggctcg ctgctgggtc tgttccatcc
     1621 cgcaaaaacc gccatccgcc ccaatcccgc cgacgatctc aaaaacatcg gcggcgattt
     1681 tcaacgcgcc atagagaaag cgcgcaaatg accgaaaacg cacaggacaa ggcgcggcag
     1741 gctgtcgaaa ccgtcgtcaa atccccggag cttgtcgagc aaatcctgtc cgacgagtac
     1801 gtgcaaataa tgatagcccg gcgtttccat tcgggaccgt tgccgccgcc gtccgacttg
     1861 gcgcaataca acgacattat cagcaacggg gcagaccgca ttatggcaat ggcggaaaaa
     1921 gaacaagccg tccggcacga aaccatacgg caagaccaaa ccttcaacag gcgcgggcaa
     1981 ctgtacggct tcatcagcgt catcctgata ctgctttttg ccgtcttcct cgtatggagc
     2041 ggctaccccg caaccgccgc ctcccttgcc ggcggcacag tggttgcctt ggcgggtgct
     2101 ttcgtgattg gaagaagccg agaccaaggc aaaaattaat gacaaatcct agggcgtgct
     2161 tcatatccgc ccgaacgccg aaccgcacat ataggcacat cccgtgcgcc gcccggaagc
     2221 ggaagccgcg ccctcccaaa caaacccgaa tcccgtcaga taaggaaaaa taatgaaaac
     2281 aaccgacaaa cggacaaccg aaacacaccg caaagccccg aaaaccggcc gcatccgctt
     2341 ctcgcctgct tacttagcca tatgcctgtc gttcggcatt cttccccaag cttgggcggg
     2401 acacacttat ttcggcatca actaccaata ctatcgcgac tttgccgaaa ataaaggcaa
     2461 gtttgcagtc ggggcgaaag atattgaggt ttacaacaaa aaaggggagt tggtcggcaa
     2521 atcaatgaca aaagccccga tgattgattt ttctgtggtg tcgcgtaacg gcgtggcggc
     2581 attggtgggc gatcaatata ttgtgagcgt ggcacataac ggcggctata acaacgttga
     2641 ttttggtgcg gaaggaagca atcccgatca acatcgtttt acttataaaa ttgtgaaacg
     2701 gaataattat aaagcaggga ctaacggcca tccttatggc ggcgattatc atatgccgcg
     2761 tttacataaa tttgtaaccg atgcagaacc tgttgaaatg accagttata tggatgggcg
     2821 gaaatatatc gatcaaaata attaccctga ccgtgttcgt attggggcag gcaggcaata
     2881 ttggcgatct gatgaagatg agcccaataa ccgcgaaagt tcatatcata ttgcaagtgc
     2941 gtattcttgg ctcgttggtg gcaatacctt tgcacaaaat ggatcaggtg gtggcacagt
     3001 caacttaggt agtgaaaaaa ttaaacatag cccatatggt tttttaccaa caggaggctc
     3061 atttggcgac agtggctcac caatgtttat ctatgatgcc caaaagcaaa agtggttaat
     3121 taatggggta ttgcaaacgg gcaaccccta tataggaaaa agcaatggct tccagctggt
     3181 tcgtaaagat tggttctatg atgaaatctt tgctggagat acccattcag tattctacga
     3241 accacgtcaa aatgggaaat actcttttca cgacaataat aatggcacag gaaaaatcga
     3301 cgccaaacat gaacacaatt ctctgcctaa tagattaaaa acacgaaccg ttcaattgtt
     3361 taatgtttct ttatccgaga cagcacaaga acctgtttat catgctgcag gtggtgtcaa
     3421 cagttatcga cccagactga ataatggaga aaatatttcc tttattgacg aaggaaaagg
     3481 cgaattgata cttaccagta acatcaacca aggtgctgga ggattatatt tccaaggaga
     3541 ttttacggtc tcgcctgaaa acaacgaaac gtggcaaggc gcgggcgttc atatcagtga
     3601 agacagtacc gttacttgga aagtcaatgg cgtggcaaac gaccgcctgt ccaaaatcgg
     3661 caaaggcacg ctgcacgttc aagccaaagg ggaaaaccaa ggctcgatca gcgtgggcga
     3721 cggtaaagtt attttagatc aacaagcaga tgaaaataat aaaaaacaag cctttagtga
     3781 aatcggcttg gtcagcggca ggggtacggt gcaactgaat gccgataatc agttcaaccc
     3841 cgacaaactc tatttcggct ttcgcggcgg acgtttggat ttgaacgggc attcactttc
     3901 gttccaccgt attcaaaata ccgatgaagg ggcgatgatt gtcaaccaca atcaagacaa
     3961 agaatccacc gttaccatta caggcaataa agatattgct acaaccggca ataacaacag
     4021 cttggatagc aaaaaagaaa ttgcctacaa cggttggttt ggcgagaaag atacgaccaa
     4081 aacgaacggg cggctcaacc ttgtttacca gcccgctgca gaagaccgca ccctgctgct
     4141 ttccggcgga acaaatttaa acggcaacat cacgcaaaca aacggcaaac tgtttttcag
     4201 cggcagacca acaccgcacg cctacaatca tttaaacgac cattggtcgc aaaaagaggg
     4261 cattcctcgc ggggaaatcg tgtgggacaa cgactggatc aaccgcacat ttaaagcgga
     4321 aaacttccaa attaaaggcg gacaggcggt ggtttcccgc aatgttgcca aagtgaaagg
     4381 cgattggcat ttgagcaatc acgcccaagc agtttttggt gtcgcaccgc atcaaagcca
     4441 cacaatctgt acacgttcgg actggacggg tctgacaaat tgtgtcgaaa aaaccattac
     4501 cgacgataaa gtgattgctt cattgaccaa taccgacatc agcggcaatg tcagccttgc
     4561 cgatcacgct catttaaatc tcacagggct tgccacactc aacggcaatc ttagtgcaaa
     4621 tggcgataca cgttatacag tcagccacaa cgccacccaa aacggcgacc ttagcctcgt
     4681 gggcaatgcc caagcaacat ttaatcaagc cacattaaac ggcaacacat cggcttcggg
     4741 caatgcttca tttaatctaa gcgaccacgc cgtacaaaac ggcagtctga cgctttccgg
     4801 caacgctaag gcaaacgtaa gccattccgc actcaacggt aatgtctccc tagccgataa
     4861 ggcagtattc cattttgaaa gcagccgctt taccggacaa atcagcggca gcaaggatac
     4921 ggcattacac ttaaaagaca gcgaatggac gctgccgtca ggcacggaat taggcaattt
     4981 aaaccttgac aacgccacca ttacactcaa ttccgcctat cgccacgatg cggcaggggc
     5041 gcaaaccggc agtgcgacag atgcgccgcg ccgccgttcg cgccgttccc tattatccgt
     5101 tacacctccg gcttcggtag aatcccgttt caacacgctg acggtaaacg gcaaattgaa
     5161 cggtcaggga acattccgct ttatgtcgga actcttcggc taccgcagcg acaaattgaa
     5221 gctggcggaa agttccgaag gcacttacac cttggcggtc aacaataccg gcaacgaacc
     5281 tgcaagcctc gaacaattga cggtagtgga aggaaaagac aacaaaccgc tgtccgaaaa
     5341 ccttaatttc accctgcaaa acgaacacgt cgatgccggc gcgtggcgtt accaactcat
     5401 ccgcaaagac ggcgagttcc gcctgcataa tccggtcaaa gaacaagagc tttccgacaa
     5461 actcggcaag gcagaagcca aaaaacaggc ggaaaaagac aacgcgcaaa gccttgacgc
     5521 gctgattgcg gccgggcgcg atgccgtcga aaagacagaa agcgttgccg aaccggcccg
     5581 gcaggcaggc ggggaaaatg tcggcattat gcaggcggag gaagagaaaa aacgggtgca
     5641 ggcggataaa gacaccgcct tggcgaaaca gcgcgaagcg gaaacccggc cggctaccac
     5701 cgccttcccc cgcgcccgcc gcgcccgccg ggatttgccg caactgcaac cccaaccgca
     5761 gccccaaccg cagcgcgacc tgatcagccg ttatgccaat agcggtttga gtgaattttc
     5821 cgccacgctc aacagcgttt tcgccgtaca ggacgaatta gaccgcgtat ttgccgaaga
     5881 ccgccgcaac gccgtttgga caagcggcat ccgggacacc aaacactacc gttcgcaaga
     5941 tttccgcgcc taccgccaac aaaccgacct gcgccaaatc ggtatgcaga aaaacctcgg
     6001 cagcgggcgc gtcggcatcc tgttttcgca caaccggacc gaaaacacct tcgacgacgg
     6061 catcggcaac tcggcacggc ttgcccacgg cgccgttttc gggcaatacg gcatcgacag
     6121 gttctacatc ggcatcagcg cgggcgcggg ttttagcagc ggcagtcttt cagacggcat
     6181 cggaagcaaa atccgccgcc gcgtgctgca ttacggcatt caggcacgat accgcgccgg
     6241 tttcggcgga ttcggcatcg aaccgcacat cggcgcaacg cgctatttcg tccaaaaagc
     6301 ggattaccgc tacgaaaacg tcaatatcgc cacccccggc cttgcgttca accgctaccg
     6361 cgcgggcatt aaggcagatt attcattcaa accggcgcaa cacatttcca tcacgcctta
     6421 tttgagcctg tcctataccg atgccgcttc gggcaaagtc cgaacgcgcg tcaataccgc
     6481 cgtattggct caggatttcg gcaaaacccg cagtgcggaa tggggcgtaa acgccgaaat
     6541 caaaggtttc acgctgtccc tccacgctgc cgccgccaaa ggcccgcaac tggaagcgca
     6601 acacagcgcg ggcatcaaat taggctaccg ctggtaacac cggatatgcc gaaaggggtt
     6661 tgacgatgcc gccgtgcgct gtcaaaccct ttttctgccg ccgccttgtg cctgctccat
     6721 tgtctgataa ccgtcaaatt gatttttagc ccatgtttgg tgggtcgggg aaatctatat
     6781 cttcgtgcgt gccgaaatag tctatgcccg atatacaatt ttgatacaca aacttggaaa
     6841 tatcggtatc gtcgccggag cgatagaatg cggacagttt ttcattgaat tgcggcatct
     6901 gcatttcgga gatttccaag atgccgcagc cccccgccat catcagaccg ttggcaaata
     6961 aggttgccgt tcgtttgttg ccgtcccaaa aaacctgctg ccgcatacaa taaagcataa
     7021 aacggacggc tgcctccgtc gtcgaaccgc tttgcagtcc gatattttgt aacacgcggg
     7081 ccacttcaat ttccttcact ggattcgggg catgacggga accgtccaat agcgttacgc
     7141 cgaccgaacc ggtacggaaa tcaccgggtg ccaaagaatc gtccttggca acaatgttgt
     7201 tgattttttt aaggagtgaa atattgaccg gttcgccatt tgaaatatgc gaaatcacat
     7261 attgataggc acgtttcagg ttcaagatgg tttggatgtc ttcaagtgac acggaggcta
     7321 catttttgcc atggataatt tgttcggtct gcaataaggt cgtctgacaa ttctcaaaac
     7381 ggctgaggtt gtgaatttgg gcaaccaata ctttctttgc caaaaaaata ttttctttca
     7441 aactcaactt gtatttgtcg ggaaacacga taattcctta aataattaaa gcagtacgtt
     7501 aaatcatcat cttatcatca ctttcggggt ttatgttgca tgcgtccgtt ttctaatacg
     7561 gtttcccatc ccgcgaaacg aggcggaggc ctgtgcaaaa aacctgttca cgaaattttc
     7621 cgcattaacg atacgctgaa aatgcgctaa aaatgactgt gtttgaatat cggttgattt
     7681 catccgtttg tgtaacctcg cgccggtttt gtcatgattt tgcattatag tgaattaaat
     7741 ttaaaccagt acagcgttgc ctcgccttgc cgtactatct gtactgtttg cggcttcgtc
     7801 gccttgtcct gatttttgtt aattcactat atttttgtca tgcggatatt tcacgggatg
     7861 acaaaacggg cgcaaaaaag cccgattgga aaatccgaat cgggcttttt tgtgatgttc
     7921 tgttcgattt gcgtactaac tgccggccgg agcgtccgcg cccggtttgg caggtcggat
     7981 tctcgaatcc gacggctatt tgagatggca ggcttttgtc ggatacaagt atccgaccta
     8041 cggctt
//
LOCUS       DAWGKF010000090         8010 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.090, whole genome shotgun sequence.
ACCESSION   DAWGKF010000090 DAWGKF010000000
VERSION     DAWGKF010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8010)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8010)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8010
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.090"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            107..1048
                     /gene="miaA"
                     /locus_tag="WHR07_001357"
     CDS             107..1048
                     /gene="miaA"
                     /locus_tag="WHR07_001357"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HEZ2130566.1"
                     /translation="MPTPKAFALLGPTAGGKTALALKIAETLPVEIISLDSALVYTGM
                     DIGTAKPSASERAFVPHHLIDIITPVQTYSAARFVEDCTRLVGEISSRGRFALIVGGT
                     MMYFRALTQGLNDLPEADACLRADLDEQKQMYGLDFLYRTLQQVDPETACRLKPNDSQ
                     RIGRALEVYYLTGKPMSTHLGSPTSHTLPFDLHTAALIPENRARLHENIALRFHLMLE
                     QGFIGEVENLRRLYPSLTADSPAIRCVGYRQAWEYLDGKTDFPAFVEKGIAATRQLAK
                     RQLTWLRKTPLDCVTDPFSDGNSCTRLIEAAKRFFGA"
     gene            1052..1771
                     /locus_tag="WHR07_001358"
     CDS             1052..1771
                     /locus_tag="WHR07_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family DNA transformation protein"
                     /protein_id="HEZ2130567.1"
                     /translation="MLTTPPLAPKTVAALHRLGIRTLEELRQNGAVQTFLLLKASGLT
                     LTKSTLWQLQSLLDGTPPQEMAQHDKTRLLAELKNHPPVAAFPPQGEMAHFMGLALEQ
                     AKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEMQNYRLD
                     GCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHTAIRG
                     GILQEECRAVLSRFFQNKRKG"
     gene            1776..2264
                     /locus_tag="WHR07_001359"
     CDS             1776..2264
                     /locus_tag="WHR07_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HEZ2130568.1"
                     /translation="MTALLVILALALIAAGTAGIVYPALPGLALMFAGTWLLAYSGGY
                     QIYGAGVLWTVGLISLAGILADYVAGIWGTKYTGAGKLAVRGALAGSIIGIFFSLPGL
                     ILGPFIGAAAGELIDRRNMLQAGKAGLGTLLGLIVGTTFKIGCAVSILFILLVKYIAY
                     LF"
     gene            2330..3082
                     /gene="rlmB"
                     /locus_tag="WHR07_001360"
     CDS             2330..3082
                     /gene="rlmB"
                     /locus_tag="WHR07_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HEZ2130569.1"
                     /translation="MANQRPIYGFHAVNARLWQNPKSIVELYVQEGKNDVRTREVLEK
                     AANENIRVYFADADRLNAISKGARHQGVVGFIDASKNHVHLEDVLENLSEPPLLLILD
                     GITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVASGAAETVPYITVTNLAR
                     TLRELKEYGIWIIGTDMGGNADLYHCDLPDSAAWVMGNEGDGMRRLTREHCDMLVSIP
                     MFGTVESMNVSVSAGMVLSETRRQRVLKNEKA"
     gene            complement(3144..4535)
                     /locus_tag="WHR07_001361"
     CDS             complement(3144..4535)
                     /locus_tag="WHR07_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine permease"
                     /protein_id="HEZ2130570.1"
                     /translation="MSGHMGKGADAPDLVYGLEDRPPFGNALLSAVTHLLAIFVPMIT
                     PALIVGGALELPVEMTAYLVSMAMVASGVGTYLQVNRFGPVGSGMLSIQSVNFSFVTV
                     MIALGAGMKEGGLTKDAMISTLLGVSFVGAFLVCFSAWLLPYLKKVITPTVSGVVVML
                     IGLSLVHVGITDFGGGFGAKADGTFGSMENLGLASLVLLIVLVFNCMKNPLLRMSGIA
                     VGLIAGYIVALFLGKVDFSALQNLPLVTLPVPFKYGFAFDWHAFIVAGAIFLLSVFEA
                     VGDLTATAMVSDQPIEGEEYTKRLRGGVLADGLVSVIATALGSLPLTTFAQNNGVIQM
                     TGVASRHVGKYIAVILVLLGLFPVVGRAFTTIPSPVLGGAMVLMFGLIAIAGVRILVS
                     HGIRRREAVIAATSVGLGLGVAFEPEVFKNLPVLFQNSISAGGITAVLLNLVLPEDKT
                     EAAVKFDTDHLEH"
     gene            complement(4550..4804)
                     /locus_tag="WHR07_001362"
     CDS             complement(4550..4804)
                     /locus_tag="WHR07_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130571.1"
                     /translation="MLPIVAYFTAGVKSGGSGMHGAAWRRMRRVCIFVFEIRLLRFAN
                     DIPAATVRNLFAGRARMPSEIEIEAVWRIRYNPRFGFFNI"
     gene            4842..5717
                     /locus_tag="WHR07_001363"
     CDS             4842..5717
                     /locus_tag="WHR07_001363"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEZ2130572.1"
                     /translation="MLQGSLVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGT
                     TGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLS
                     VVPYYNKPSQEGMYRHFKAVAEAAAIPMILYNVPGRTVVSMTNDTILRLSEIPNIVGV
                     KEASGNVGSNIELINRAPEGFVVLSGDDHTALPFMLCGGHGVITVAANAAPKLFADMC
                     RAALQGDIALARELNDRLIPIYDTMFCEPSPAAPKWAVSALGRCEPHVRLPLVPLTEG
                     GQAKVRAALKASGQL"
     gene            5726..6922
                     /gene="bamC"
                     /locus_tag="WHR07_001364"
     CDS             5726..6922
                     /gene="bamC"
                     /locus_tag="WHR07_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HEZ2130573.1"
                     /translation="MPSEAFRRHNATNTLISITQDDTMTHIKPVIAALALIGLAACSG
                     SKTEQPKLDYQSRSHRLIKLEVPPDLNNPDQGNLYRLPAGSGAVRASDLEKRRTPAVQ
                     QPADAEVLKSVKGVRLERDGSQRWLVVDGKSHAEIWPLLKAFWQENGFDIKSEEPAIG
                     QMETEWAENRAKIPQDSLRRLFDTVGLGGIYSTGERDKFIVRIEQGKNGVSDIFFAHK
                     AMKEVYGGKDKDTTVWQPSPSDPNLEAAFLTRFMQYLGVDGQQAENASAKKPTLPAAN
                     EMARIEGKSLIVLGDYGRNWRRTVLALDRIGLTVVGQNTERHAFLVQKAPNESNAVTE
                     QKPGLFKRLLGKGKAEKPAEQPELIVYAEPVANGSRIVLLNKDGSAYAGKDASALLGK
                     LHSELR"
     gene            complement(6979..7911)
                     /gene="pip"
                     /locus_tag="WHR07_001365"
     CDS             complement(6979..7911)
                     /gene="pip"
                     /locus_tag="WHR07_001365"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HEZ2130574.1"
                     /translation="MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAG
                     ASPECRGFFNPDVFRIVIIDQRGCGRSRPYACAEDNTTWDLVADIEKVREMLGIGKWL
                     VFGGSWGSTLSLAYAQTHPERVKGLVLRGIFLCRPSETAWLNEAGGVSRIYPEQWQKF
                     VAPIAENRRNRLIEAYHGLLFHQDEEVCLSAAKAWADWESYLIRFEPEEVDEDAYASL
                     AIARLENHYFVNGGWLQGDRAILNNIGKIRHIPTIIVQGRYDLCTPMQSAWALSKAFP
                     EAELRVVQAGHRAFDPPLVDALVQAVEDILPHLL"
BASE COUNT         2036 a         2636 c         1874 g         1464 t
ORIGIN      
        1 gcatacggta aacacgcccc cttgccgtcg gcgtgcttcc gcaaaccaaa atataacatc
       61 ggcacgcttt ccgctataat ccgcattttc gcaaccctga aacatcatgc cgaccccgaa
      121 agcctttgcc ctgctcgggc cgaccgccgg aggcaaaacc gcgctcgccc tcaaaattgc
      181 cgaaaccctg cctgtcgaaa tcatcagcct cgattccgcg ctggtctata ccggtatgga
      241 catcggcacg gcgaaaccgt ccgcctccga acgcgccttt gtcccgcacc accttatcga
      301 catcattacg cctgttcaga catacagtgc cgcccgtttt gtcgaagact gcacgcgctt
      361 ggtcggggaa atttcctcac gcggcaggtt tgcccttatt gtcggcggca caatgatgta
      421 tttccgcgcc ctgacccaag gtttgaacga tttgcccgaa gccgatgcct gcctgcgtgc
      481 cgacttggac gaacaaaaac aaatgtacgg cttggatttc ctctaccgca ccctgcaaca
      541 ggtcgaccct gaaacagcat gccgtctgaa accgaacgac agccagcgta tcggacgcgc
      601 tttggaagtt tattatttaa ccggcaaacc gatgagtacg catctcggca gcccaacctc
      661 ccatacgctc cccttcgatt tgcataccgc cgccctgatt cccgaaaacc gcgcccgcct
      721 gcatgaaaac atcgccctgc gtttccacct gatgcttgaa cagggcttta tcggcgaagt
      781 agaaaacctg cgccgcctct atcccagcct gaccgccgac tcccctgcca tacgctgcgt
      841 cggctaccgt caggcatggg aatatctgga cggaaaaacc gatttcccgg catttgtcga
      901 gaaaggcatt gccgccacgc gccaacttgc caaacgccaa ctgacttggt tgcgcaaaac
      961 acctttagac tgcgttaccg acccgttttc agacggcaat tcatgcacac gcctgattga
     1021 ggcggcaaaa cggtttttcg gcgcataaac tatgctgacc acgccgccgc tcgcccccaa
     1081 aaccgtcgcc gccctacaca ggctcggtat ccgtacgctc gaagaactgc ggcaaaacgg
     1141 cgcggttcaa accttcttgt tattgaaggc atcaggtttg accctcacga aaagcacgct
     1201 gtggcagctt cagtcgctgc tggacggcac gccgccgcaa gaaatggcgc aacacgataa
     1261 aacccgcctg cttgccgagt tgaaaaacca tccgcccgtc gccgcctttc ccccgcaagg
     1321 cgaaatggcg catttcatgg gtttggcatt ggaacaggcg aaactgtccg cattaatggg
     1381 cgaaataccc gtcggggcag tcatcgtttc agacggcaaa atcatcgcat cggcacacaa
     1441 cacctgcatt gccgactgca atgtcagccg gcacgccgaa atcaacgcct tggcacaggc
     1501 aggcagcgaa atgcaaaact accgccttga cggatgcgac atctacatca ccctcgaacc
     1561 atgcgccatg tgcgcgtccg cactgataca ggcacgaatc aggcgcgtga tctacggtgc
     1621 ggcagaaccc aaaaccggcg cggcaggaag catcgtcaac ctgtttgccg acaaacgcct
     1681 caatacgcac accgccatac ggggcggaat cctgcaagaa gaatgccgcg ccgtattaag
     1741 ccgttttttc caaaacaaaa gaaaaggttg aacctatgac cgccttgctc gtcatcctcg
     1801 ccctcgccct gatagccgcc ggtacggcgg gcatcgttta ccccgccctg cccggattgg
     1861 cattgatgtt tgccggaacc tggctgctcg cctactccgg cggctaccaa atctacggcg
     1921 cgggcgtttt gtggacggtc ggactcatca gccttgccgg catactggcg gactatgtgg
     1981 caggcatatg ggggacaaaa tataccggag cgggcaagct cgccgttcgc ggcgcattgg
     2041 ccggcagcat catcggcata tttttctccc ttcccggact aatactcggt ccctttatcg
     2101 gcgcggcggc aggcgaactg atcgatcggc gcaatatgct tcaggcaggt aaagcgggct
     2161 tgggtacgct gttggggctt atcgtcggta cgacattcaa aatcggctgc gccgtatcca
     2221 tcttgtttat cctgttggtg aaatacatcg cctacctgtt ttaacccctt cagacggcat
     2281 accggcaaat tgctataatg ccgtctgaac ccttttcaca aagcaccata tggcaaacca
     2341 aagacctatc tacggcttcc atgccgtcaa cgcccgattg tggcaaaacc ccaaatccat
     2401 cgtcgaactc tatgtccaag aaggcaaaaa cgatgtacgc acgcgcgaag tgttggaaaa
     2461 ggcggcaaac gaaaacatcc gcgtatattt tgccgatgcc gaccgcctca acgccatcag
     2521 caaaggtgcg cgccatcagg gcgtggtcgg atttatcgat gcctccaaaa accacgtcca
     2581 cctcgaagac gtattggaaa acttaagcga accgccgctg ctgctgatac tcgacggcat
     2641 caccgatccg cacaacctcg gcgcgtgcct gcgtaccgcc gacgcaatgg gcgtacatgc
     2701 cgtcatcgca ccgaaagaca aaagcgcggg gctgaacgcc accgtcagca aagtcgccag
     2761 cggcgcggcg gaaaccgtcc cctacatcac cgtaaccaac ctcgcccgca ccctgcgcga
     2821 gctgaaagaa tacggcattt ggatcatcgg caccgatatg ggcggcaacg ccgaccttta
     2881 ccattgcgat ctgcccgaca gcgcggcatg ggtgatgggc aacgaaggcg acggtatgcg
     2941 ccgcctgaca cgcgaacatt gcgacatgct ggtgtccata cccatgttcg gcacggtcga
     3001 aagcatgaac gtctccgtgt ctgccggaat ggtattaagc gaaacccgcc ggcagcgcgt
     3061 attaaaaaac gaaaaagcgt aagcctcaaa aacaatgccg tctgaaacag ggattctgtt
     3121 tcagacggca ttcgttttca aaatcagtgt tccaagtggt cggtatcaaa cttgaccgcc
     3181 gcctcggttt tatcttcggg caagaccaaa ttcagcaaga ctgccgtaat gccgccggcg
     3241 gaaatagagt tttggaacaa gacaggcagg tttttaaaca cttccggctc aaacgccacg
     3301 cccaagccca agccgaccga agtcgccgca atcaccgcct cgcgcctgcg gatgccgtgg
     3361 ctgaccaaaa tccgcacacc cgcaatcgca atcaagccga acatcaaaac catcgcgccg
     3421 cctaaaaccg gactcggaat cgtcgtaaac gcgcgtccga caacggggaa cagacccaac
     3481 agcaccaaaa tcacggcaat atatttgccc acatggcgcg aagccacgcc ggtcatctga
     3541 atcacgccgt tgttttgcgc aaacgttgtc agcggcagcg aacccaaagc cgtcgcaatc
     3601 accgacacca agccgtctgc caacacgccg ccgcgcaggc gtttggtgta ttcctcgcct
     3661 tcaatcggct gatcggacac cattgccgtt gcggtcaaat cgccgaccgc ctcaaacacg
     3721 ctcaacagga aaatcgcacc cgccacaata aatgcgtgcc agtcaaaagc aaaaccatat
     3781 ttaaacggta cgggcagcgt aaccagcggc aggttttgca gtgccgaaaa atccaccttg
     3841 cccaaaaaca gcgcgacgat atagccggca atcagaccga ccgcaatgcc gctcatccgc
     3901 agcagcgggt ttttcatgca gttgaacacc agcacaatca gcagcaccag cgatgccagc
     3961 cccaagtttt ccatcgagcc gaacgtgccg tccgcctttg cgccgaagcc gccgccgaaa
     4021 tcggtaatac cgacgtgtac caaactcaag ccgatcagca tcaccaccac accgctgacc
     4081 gtcggcgtaa tcactttttt caaatacggc agaagccacg ccgagaaaca caccaaaaac
     4141 gcgccgacaa acgatacgcc caagagcgtc gaaatcatcg catccttagt caaaccgccc
     4201 tctttcatcc ccgcgcccag cgcaatcatg acggtaacga acgagaaatt caccgactgg
     4261 atagacagca tccccgaacc gaccggcccg aagcggttga cctgcaaata agtgccgaca
     4321 cccgacgcaa ccatcgccat cgacacgaga tacgccgtca tctccaccgg cagttccagc
     4381 gcgccgccca caatcagcgc gggcgtaatc atcggcacga aaatcgccaa aagatgggta
     4441 accgcgctca acagcgcatt accgaacggc ggcctatcct ccaaaccgta caccaaatca
     4501 ggcgcatccg ccccttttcc catatgaccg ctcataatgt ttccttgctt caaatgttga
     4561 aaaaaccaaa gcgcggattg tagcgaatcc gccataccgc ttcaatttcg atttcggacg
     4621 gcatacgcgc ccgtccggca aacagattcc gaaccgtcgc cgccggaata tcgtttgcaa
     4681 aacgcaataa cctgatttca aacacaaaaa tacaaacccg acgcatccgc cgccaagccg
     4741 ccccgtgcat accggacccg ccggatttca cacctgcggt aaagtaggct acaatcggaa
     4801 gcattaccgc cccctacacc acaactgata aaaggttctg tatgttacaa ggtagcctgg
     4861 ttgccctgat taccccgatg aatcaagacg gcagcatcca ttacgaacaa ctccgcgact
     4921 taatcgactg gcacattgaa aacggcacgg acggcatcgt cgccgtcggc acgacaggcg
     4981 aatccgccac cctctccgtc gaagaacaca ccgccgttat cgaagccgtc gtcaaacacg
     5041 ttgccaaacg cgtccccgtc atcgccggca caggggcgaa caacaccgtc gaagccatcg
     5101 ccctttccca agccgccgaa aaagccggcg cggactacac cctctccgtc gtcccctatt
     5161 acaacaaacc ttcgcaagaa ggcatgtacc gccatttcaa agccgttgcc gaagccgccg
     5221 cgattccgat gatactctac aacgttcccg gccgtaccgt cgtcagcatg actaacgaca
     5281 ccatcctgcg cctttcagaa atccccaata tcgtgggcgt taaagaagcc agcggcaacg
     5341 tcggcagcaa catcgaactc atcaaccgcg cccccgaagg cttcgtcgtc ctgtccggcg
     5401 acgaccacac cgccctaccg ttcatgctct gcggcggaca cggcgtgatt accgtagccg
     5461 ccaacgccgc gcccaagctc tttgccgata tgtgccgcgc cgcgcttcaa ggcgatatcg
     5521 cccttgcacg cgaactcaac gaccggctga ttccgattta cgacaccatg ttctgcgaac
     5581 ccagccccgc cgcaccgaaa tgggcggtat ccgccctggg cagatgcgaa ccgcacgtcc
     5641 gcctgccgct cgttccgctg acggaaggcg gacaggcaaa agtccgcgcc gccctgaaag
     5701 cctcaggaca actttaaata tagccatgcc gtctgaagcg ttcagacggc ataacgcaac
     5761 aaacacttta atatccatca cacaggatga cacgatgacc catatcaaac ccgtcattgc
     5821 cgcgctcgca ctcatcgggc ttgccgcctg ctccggcagc aaaaccgaac agcccaagct
     5881 cgactaccaa agccggtcgc accgcctgat caaactcgaa gtcccacctg atttgaacaa
     5941 ccccgaccaa ggcaacctct accgcctgcc tgccggttcg ggcgccgtcc gcgccagcga
     6001 tttggaaaaa cgccgcacac ccgccgtcca acagcctgcc gatgccgaag tattgaaaag
     6061 cgtcaaaggt gtccgcctcg agcgcgacgg cagccaacgc tggctcgttg tcgacggcaa
     6121 gtctcatgcc gaaatctggc cgctcctgaa agccttttgg caggaaaacg gcttcgacat
     6181 caaatccgaa gaacccgcca tcggacaaat ggaaaccgag tgggcggaaa accgtgccaa
     6241 aatcccccaa gacagcttgc gccgcctatt cgacacagtc ggtttgggcg gcatctactc
     6301 caccggcgag cgcgacaaat tcatcgtccg tatcgaacag ggcaaaaacg gcgtttccga
     6361 catcttcttc gcccacaaag ccatgaaaga agtgtacggc ggcaaagaca aagacacgac
     6421 cgtatggcag ccctccccgt ccgatcccaa cctcgaagcc gctttcctga cgcgctttat
     6481 gcaatatttg ggcgttgacg gacagcaggc ggaaaacgca tcggcaaaaa aacctaccct
     6541 tcccgccgcc aacgaaatgg cgcgtatcga aggcaaaagc ctgattgtct taggcgacta
     6601 cggcagaaac tggcggcgca ccgtgctcgc cctcgaccgc atcgggctga ccgtcgtcgg
     6661 tcaaaacacc gaacgccacg ctttcctggt tcaaaaagcc ccgaacgaaa gcaatgcagt
     6721 taccgaacaa aaacccggcc tgttcaaacg cctgctgggc aaaggcaaag cggagaaacc
     6781 tgccgaacag ccggaactga ttgtctatgc cgagcctgtc gccaacggct cgcgcatcgt
     6841 cctgctcaac aaagacggca gcgcatatgc cggcaaagac gcatccgcat tattgggcaa
     6901 actccattcc gaactgcgtt aaaccattca aaacaaaagc agcttccaaa cagaagctgc
     6961 ttttttatgc ggaacttttt acaacaaatg gggcaaaata tcctcaactg cctgaaccaa
     7021 cgcatccacc aaaggcggat cgaacgcacg atgccctgcc tgaaccaccc tcaattccgc
     7081 ttcgggaaag gctttcgaca gcgcccacgc actctgcatc ggcgtacaca aatcataccg
     7141 cccctgcacg ataatggtcg ggatatgccg tattttgccg atattgttca aaatcgccct
     7201 atcgccctgc aaccagccgc cgttgacaaa ataatggttt tccaaacgcg cgattgccag
     7261 cgaggcataa gcatcttcat ccacttcctc cggctcgaaa cggatcagat agctttccca
     7321 atccgcccaa gcctttgcgg cagacaggca cacttcttca tcttgatgaa acagcaaccc
     7381 gtgatacgcc tcaatcagcc ggttccgccg attttcagca atcggcgcga caaatttttg
     7441 ccattgttcc ggataaatcc ggctcacacc gcccgcctcg ttcagccacg ccgtttcaga
     7501 cggcctgcac aaaaatatcc cgcgcaacac caatcccttt acccgttccg gatgggtttg
     7561 ggcataagcc agcgacaaag tactgcccca cgaaccgccg aacaccagcc atttcccgat
     7621 acccagcatt tcacggactt tttcaatatc cgccaccaaa tcccaagtcg tattgtcttc
     7681 cgcacaagca tacgggcgcg aacgtccgca accgcgctgg tcaataatga cgatgcggaa
     7741 cacatcggga ttgaaaaaac cccgacattc aggcgaagcc cccgcccccg gtccgccgtg
     7801 taaaaaaatg accggcacac cgtcgggatt gcccgactct tcccaataaa tttgatgaat
     7861 ttcagacacc tgcaagtatc cgctatgaaa aggctgtttt atctcataca tcatcttctc
     7921 ccatattgcc tctgacaatc cgaacattcc cacacgcaac atcacgcacg aaacacaagc
     7981 cgccccgaaa ggcaaattcc gaaaaatcgc
//
LOCUS       DAWGKF010000091         7861 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.091, whole genome shotgun sequence.
ACCESSION   DAWGKF010000091 DAWGKF010000000
VERSION     DAWGKF010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7861)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7861)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7861
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.091"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(19..2061)
                     /gene="recG"
                     /locus_tag="WHR07_001366"
     CDS             complement(19..2061)
                     /gene="recG"
                     /locus_tag="WHR07_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEZ2130575.1"
                     /translation="MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETH
                     IMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQIADGSGSVLFLRFIHFYASHQKQ
                     TAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
                     QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTFPAWQRLKF
                     DELLAQQLSMRLARQKRIGGTAAALGGDGTLTQALCQALPFALTDAQEKVVSEICRDM
                     AQTHPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEILAEQHFIKFKQWLE
                     PLGIEVVRLFGSLRKKAKDEAKAKLVDGSVKIAVGTHALFSDGVAFHNLGLTIVDEQH
                     RFGVAQRLALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDKLPPGRTPIKTRL
                     VNNVRRAEVEGFVLGACRKGRQAYWVCPLIEESETLQLQTAAETLARLQTALPELNIG
                     LVHGRMKAAEKAEVMARFSSGGLNVLVATTVIEVGVDVPNAALMVIEHAERMGLAQLH
                     QLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLG
                     ARQSGVPMLRFAKLEEDLHLLEQAREIAPILIEQNPEIVEAHLARWLSGREGYLGV"
     gene            complement(2147..2590)
                     /gene="secB"
                     /locus_tag="WHR07_001367"
     CDS             complement(2147..2590)
                     /gene="secB"
                     /locus_tag="WHR07_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HEZ2130576.1"
                     /translation="MSEELQPVFSIERLYVKDLSLEVPHAPQIFLEQGEPEVDMRVST
                     GSQKLEDGYYNVDVTVTVTAKLDNERTMFLNEVTQSGIFRLENIPEEDVQLLLGVACP
                     NILFPYAREAVSGTVTRAGFPPVLLAPINFEAIYQQQQEAEAAGA"
     gene            complement(2611..2868)
                     /gene="grxC"
                     /locus_tag="WHR07_001368"
     CDS             complement(2611..2868)
                     /gene="grxC"
                     /locus_tag="WHR07_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HEZ2130577.1"
                     /translation="MQTVTMYTGPFCPYCAMAKRLLHAAGVGHIDEIRVDASPEAFAE
                     MQQLSGQRSVPQIFIGETHVGGFTDLYRLQQEGGLDGLLNP"
     gene            3081..4574
                     /gene="rng"
                     /locus_tag="WHR07_001369"
     CDS             3081..4574
                     /gene="rng"
                     /locus_tag="WHR07_001369"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HEZ2130578.1"
                     /translation="MLSGLPIPKDIARPPETILVNITPQETRVAVLEENNICELHIER
                     NSEHSLVGNIYLGVVRRVLPGMQSAFIDIGLERAAFLHIVDVLEQRRNPEETQRIEHM
                     LFEGQSVLVQVIKDPINTKGARLSTQISLAGRFLVHLPQEDHIGVSQRIEDDAERSSL
                     RERLDKLLPENACRGYIIRTNAENATDEQLQSDIDYLTKVWEHIQEQAKIRPPETLLY
                     QDLPLSLRVLRDMVGCDTQKILVDSTVNHGRMTRFAEQYVHGALGRIELFKGERPLFE
                     THNVEQEISRALQPRVNLNFGSYLIIESTEAMTTIDVNTGGFVGARNFDETIFRTNLE
                     ACHTIARELRLRNLGGIIIIDFIDMAQESHREAVLQELAKALAFDRTRVTLHGFTSLG
                     LVELTRKRSRENLNQVLCEPCPSCQGRGRLKTPQTVCYEIQREIVREARRYDAESFRI
                     LAAPNVIDLFLDEESQSLAMLIDFIGKPISLAVETAYTQEQYDIVLM"
     gene            complement(4608..5858)
                     /locus_tag="WHR07_001370"
     CDS             complement(4608..5858)
                     /locus_tag="WHR07_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HEZ2130579.1"
                     /translation="MFVPLAMLAGMFSYYETFHETEALQDDLLRQAALYVAPDSKPET
                     LPEGDGDTRILVQMPQQEDPVVSLPAHLADGLHTLQADGDDDYYRVYIRTTEQGRIAV
                     MQENEYREDLAADAARQSVLPLLAALPLMILLTVWITHKAMRPVRKLSQSLEQRRIND
                     LSALSVDNIPSEIRGFVTAINLLLKRADEDIRHRQRFVADAAHELRTPMTALSLQAER
                     LNNMSLPPDAARQPAVLQQSIRRNKHLLEQLLALARSQSDETPLTKTTFGLQSRFRQV
                     LQELMPLALEKRQDIGVAVRGDVEVSADETEIYTLIKTFADNAVRYTPPEGRIDLGFT
                     DEGKYLAVWVEDNGNGIPESERARVLDPFYRILGMEQQGTGLGLSIADTLATEYGRYL
                     ELSDSRRFGRGLLIRALLDKESLK"
     gene            complement(5854..6029)
                     /locus_tag="WHR07_001371"
                     /pseudo
     CDS             complement(5854..6029)
                     /locus_tag="WHR07_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692565.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
     gene            complement(6252..7565)
                     /locus_tag="WHR07_001372"
     CDS             complement(6252..7565)
                     /locus_tag="WHR07_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CitMHS family transporter"
                     /protein_id="HEZ2130580.1"
                     /translation="MLTFIGLLIIGVIVWLLLTEKVSPIIALILVPLFGALLAGFDVS
                     QLKEFYSGGTKSVMQIVIMFMFSILFFGIMNDVGLFRPMIGGLIKLTRGNIVAVSVGT
                     VLVSVVAQLDGAGATTFLLVVPALLPLYKRLHMNPYLLFLLLTSSAGLINLLPWGGPT
                     GRVASVLGADVGELYKPLLTVQIIGVVFILALSLLLGVREKRRIVRELGALPAVADLI
                     KPVPLSEEEQKLARPKLFWWNVLLFLAAMSLLFSGIFPPGYVFMLAATAALLLNYRSP
                     QEQMERIYAHAGGAVMMASIILAAGTFLGILKGAGMLDAISKDLVHILPDALLPYLHI
                     AIGVLGIPLELVLSTDAYYFGLFPIVEQITSQAGVAPEAAGYAMLIGSIVGTFVTPLS
                     PALWMGLGLAKLSMGKHIRYSFFWAWGLSLAILASSIAAGIVPLP"
BASE COUNT         1849 a         2324 c         2051 g         1637 t
ORIGIN      
        1 tttcagacgg cattttgctc acacgcccaa atacccttcc ctgccggaaa gccaccttgc
       61 caaatgcgct tcgacgattt cggggttttg ctcaatcagt atcggggcga tttcgcgcgc
      121 ttgttccaaa aggtgcaggt cttcttcgag tttggcgaaa cgcagcatag gcacgccgct
      181 ttggcgcgcg ccgagaaact cgcccgggcc gcggatgttg aggtcttggc gggcgatttc
      241 gaagccgtcg gtgtgttcgt agatgacttt cagccgcgct ttggcgagtt cgcccaaggg
      301 ttcggcaaac aggaggacgc acacgctttc cgccgcgccg cgcccgaccc gaccgcgtaa
      361 ttggtgaagc tgcgccaagc ccatgcgctc ggcgtgttcg atgaccatca gggcggcatt
      421 gggcacatct acgccgactt cgatgacggt ggtggcgacc aagacgttca gcccccccga
      481 agaaaaccgc gccatcactt cggccttttc ggcggccttc atgcgcccgt gtaccagtcc
      541 gatattgagt tcgggcaatg ccgtctgaag ccgggcgagg gtttcggcgg cggtttgcag
      601 ttgcagggtt tcgctttctt caatcaatgg gcagacccaa tacgcctgcc gcccttttcg
      661 gcaagcgccg aggacgaagc cttcgacttc ggcgcggcgg acgttgttga cgaggcgcgt
      721 tttaatcggt gtgcgcccgg gcggcagttt gtcgataacg gacacgtcca aatcggcgaa
      781 aaaactcatc gcaagcgtgc gcgggatggg cgtggcggac atcatcagct gatggacttc
      841 gcgccctttg tttttgaggg cgaggcgttg ggcaacgccg aaacggtgct gttcgtccac
      901 aatggtcaag cccaaattgt gaaacgccac gccgtctgaa aacagggcgt gcgtgccgac
      961 ggcgattttg acgctgccgt cgacgagttt ggctttggct tcgtctttgg cttttttacg
     1021 caaactgcca aaaaggcgga caacttcaat acccaaaggt tcgagccatt gtttaaattt
     1081 aataaaatgc tgttcggcaa ggatttcggt cggtgccatt acagccacct gcgcgccgga
     1141 ttcgatagcc gtcaaagcag acaaagcagc cacaatggtt ttgccgcttc cgacatcgcc
     1201 ttgcagcagg cggtgcatgg gatgggtttg tgccatgtcg cggcagattt cggaaacaac
     1261 tttttcttgc gcatcggtca gggcaaacgg caaggcttgg cacagggctt gggtcaatgt
     1321 gccgtcgccg cccaatgccg ccgccgtgcc gccgatacgc ttctgccgcg ccaagcgcat
     1381 ggaaagctgt tgtgccaaaa gttcgtcgaa tttgagccgt tgccatgcag gaaacgtgcc
     1441 gtctgaaagt tgatgaatgg tgaaactcgg cggcggcgaa tgcaaaaggc gcaggctttc
     1501 ggcaaggtgc ggcagcttca gacggcacag cagggcatcg ggcagcgtgt cgtgcagcgg
     1561 cgtaacgtcc aacgccgtct gaataatacg gcgcaaagtg ggctggttca aaccgtttac
     1621 ggtcgggtaa accggcgtga ggctttccgc caaaccgccg ccctcggcat cgcggatttt
     1681 gggatgaatc atctcgtcgc cgtaaaagcc gtgtttgatt tcgcccacgg cgcggatgcg
     1741 tttgccgacc gccgtctgtt tctgatggct ggcgtaaaag tggatgaagc gcagaaaaag
     1801 gacgctgccg gaaccgtcgg cgatttggac aatcaactgc ttgcgcggtt tgaacgttac
     1861 ttcctgatgg ataacctcgc cctcgacctg gcacggcacg ccaatcggcg cgtccttaat
     1921 cggcataatg tgcgtctcgt cctcgtaacg cagcggcagg tgcaacacca aatcccacgc
     1981 ggtatggagg ttgagtttgt cgagcttctt ggcggaaaca tcggtgattt tgagctgttt
     2041 ctgggtttcg ggcgacatca taggcagatt cctttgaacg cacctatttt atccgaaaac
     2101 aaaaataccg tctgaaacgg attcagacgg catcggcagg caggaatcaa gccccggcgg
     2161 cttcggcttc ctgctgttgt tggtaaatcg cctcaaaatt aatcggcgcg agcaggacgg
     2221 gcgggaagcc ggcacgtgtt accgtaccgg aaacggcttc gcgcgcgtaa gggaagagga
     2281 tgttcggaca cgccacgccc agcagcagct gcacatcttc ttcggggatg ttttccaaac
     2341 ggaaaatacc gctttgggtt acttcgttca aaaacatcgt gcgctcgtta tccaatttgg
     2401 cggttacggt aacggttaca tccacgttgt agtagccgtc ttccagcttt tggctgccgg
     2461 tggaaacgcg catatccact tcgggctcgc cctgttccaa aaagatttgc ggcgcgtgcg
     2521 gcacttccaa agacaagtct ttgacataca gtcgctcgat gctgaatacg ggttgcagtt
     2581 cttcgctcat tttgttttcc tagttggggg ttaagggttc agcagtccgt ccagcccgcc
     2641 ttcctgctgg aggcggtaga ggtcggtaaa tccgccgacg tgcgtttcgc cgatgaaaat
     2701 ctgcggcacg ctgcgctgtc ccgaaagctg ctgcatttcg gcaaaggctt cggggcttgc
     2761 atcgacacgg atttcgtcga tatgtccgac acctgccgcg tgcagcagcc ttttcgccat
     2821 cgcgcagtag ggacaaaacg gacctgtgta catggtaacg gtctgcatat tgggtttccg
     2881 aaagttttgc aatgataatc aatatagggg catttcccct gtttggcaag tgcggaacag
     2941 atgcacgttc aaacggcatg tgcggaatgt gtcaaagttt cttttttaaa gtatgataga
     3001 cattgtgaaa aatatttttg cacccgcgct gcgcggcgga acggatgcaa aatattttta
     3061 ttacattttc aggaaaaacc atgttgtcag gactccccat ccccaaagac atcgcgcgcc
     3121 cgcccgaaac gatattggtc aacatcacgc cgcaggaaac gcgcgtagcg gtgttggagg
     3181 aaaacaatat ctgcgagctg cacatcgagc gcaacagcga acacagccta gtcggcaata
     3241 tctatttggg cgtggtgcgc cgcgtgctgc ctgggatgca gagcgcgttt atcgacatcg
     3301 gcttggaacg cgcggcgttt ttacacatcg tcgatgtcct cgaacaacgc cgcaaccccg
     3361 aagaaaccca gcgcatcgaa catatgctgt ttgaagggca gtctgttttg gtgcaggtca
     3421 tcaaagaccc gatcaacacc aaaggcgcgc ggctttccac ccaaatctcg ctggcggggc
     3481 gtttcctcgt ccatcttccg caagaagacc acatcggcgt gtcccaacgc atcgaagacg
     3541 atgccgaacg cagcagcctg cgcgaacgcc tcgacaagct cctgccggaa aatgcctgcc
     3601 ggggctacat catccgcacc aacgccgaaa acgccaccga cgaacagctc cagtccgaca
     3661 tcgactacct gaccaaagtg tgggaacaca tccaagaaca ggcgaaaatc cggccgccgg
     3721 aaaccctgct ttatcaggat ttgcccttga gtttgcgcgt gttgcgcgat atggtcggct
     3781 gcgacacgca aaaaatcctc gtcgattcca ccgtaaacca cggccgcatg acgcgttttg
     3841 ccgaacaata cgtccacggc gcattgggca ggatagaatt gttcaaaggc gaacgcccgc
     3901 tatttgaaac ccacaacgtc gagcaggaaa tcagccgcgc cctgcaaccg cgcgtcaacc
     3961 tcaacttcgg cagctacctg attatcgaat ccaccgaagc gatgaccacg atagacgtga
     4021 acaccggcgg cttcgtcggc gcacgcaatt tcgatgaaac gattttccgc accaacctcg
     4081 aagcctgcca caccatcgcc cgcgaattga ggctgcgcaa cctcggcggc atcatcatca
     4141 tcgacttcat cgatatggcg caggaaagcc accgcgaagc cgtgttgcag gagcttgcca
     4201 aagccctcgc cttcgaccgt acccgcgtta ccctgcacgg ttttaccagc ctgggactgg
     4261 tcgagctgac gcgcaaacgc tcgcgcgaaa acttaaacca agtcctctgc gaaccctgcc
     4321 cttcctgcca aggcagaggc cgtctgaaaa cgccgcaaac cgtatgctac gaaatccagc
     4381 gcgaaatcgt ccgcgaagcg cgccgttacg atgccgaaag tttccgcatc ctcgccgccc
     4441 ccaacgtcat cgatttgttt ttggacgaag aatcgcaatc cttggcaatg ctgatagatt
     4501 tcatcggcaa accgatttct ctggcagtcg aaaccgctta cacgcaggaa caatacgaca
     4561 tcgttttgat gtaaaaatgc cgtctgaagc cttcagacgg catctgtcta tttcagggat
     4621 tccttgtcca acaaggcgcg tatcagcagc ccgcgcccaa accggcggct gtcggacaat
     4681 tccaaatatc tgccgtattc tgtggcaagc gtgtcggcga tggacagccc cagccccgtc
     4741 ccctgctgct ccattcccaa aatacggtaa aacggatcga ggacgcgggc gcgttcggat
     4801 tcgggaatgc cgttcccgtt atcttccacc cacacggcaa gatatttccc ttcgtccgtg
     4861 aaacccaaat ctatcctgcc ttcaggcggc gtgtaacgta ccgcgttatc ggcaaaggtt
     4921 ttaatcagcg tatagatttc tgtttcgtcg gcagacactt cgacatcgcc tctgaccgcc
     4981 acaccgatgt cctgacgttt ttccaaagcc agcggcatca gttcctgcaa cacttggcgg
     5041 aaacggcttt gcagaccgaa tgtcgttttc gtcagagggg tttcgtccga ctgcgaacgc
     5101 gccagtgcca aaagctgttc gagcaggtgt ttgttgcgcc tgatgctctg ctgcaaaacg
     5161 gcaggctgcc gcgctgcatc gggtgggagc gacatattgt tgagccgttc cgcctgaagg
     5221 gaaagggctg tcatcggcgt acgcaattcg tgtgccgcgt cggcgacaaa ccgctgacgg
     5281 tggcggatgt cttcatccgc acgtttcaaa agcaagttga tggcggttac gaaccctctg
     5341 atttcactgg gaatattgtc cacactcaag gcagacaggt cattgattcg gcgttgttcg
     5401 agactttgcg acaatttgcg gacggggcgc atggctttgt gcgtaatcca cacggtcagc
     5461 agtatcatca gcggcagtgc cgccagcagg ggcaacacgc tttgccgtgc cgcatccgcc
     5521 gccaaatctt cacggtattc gttttcctgc ataacggcaa tccgtccctg ttcggtcgtg
     5581 cggatataga cgcggtaata atcgtcgtcc ccgtccgcct gaagcgtgtg cagaccgtcc
     5641 gccagatgcg caggcaggct gacaacaggg tcttcctgct gcggcatctg taccaaaata
     5701 cgcgtatcgc cgtcgccctc gggcaaagtt tcgggtttgg aatcgggggc gacgtacaat
     5761 gccgcctgac ggagcaggtc gtcctgcaac gcttccgttt cgtggaaggt ttcgtagtag
     5821 gaaaacatac ctgcaagcat tgccagcgga acaaacatcc aaaccgtccc gccccggcaa
     5881 acccaaatcc agcagcatca agtcataagg ctgggcagcg gcaaccgcgc gccgtttttg
     5941 acccaatcca ccgcatagcc gccgtctttc aaacttgccg acaccgcctc cgcaatcatc
     6001 gcatcgtctt ccaccagcaa aacacgcatc aactttccct tcaaaataaa ccgtgcctat
     6061 tctaacaccc caaaattagc cgcaatttag cggtctttac gcttgccggt atttttcaaa
     6121 actgcagcac aaaaaaaccg cgccggcaac tgccttcaga cggcattggg gcgcgattgc
     6181 aacacacggg caggcaggca gagcctgcga cagaccacag gaacgattcg ggcttcagac
     6241 ggcttcgccg tttacggcag aggcacgatt cctgccgcta tcgaactggc caatatcgcc
     6301 agcgacaaac cccacgccca gaaaaacgaa taacggatgt gtttgcccat cgacaatttc
     6361 gccaaaccca agcccatcca caaagccggc gaaagcggcg taacaaaagt gccgacgata
     6421 ctgccgatca acatcgcata acctgctgct tcaggcgcca cgcccgcctg cgaggtaatc
     6481 tgctccacaa tcggaaacag tccgaaataa taagcgtccg tactcaaaac caactcaagc
     6541 ggaatgccca acacaccgat ggcaatatgc agataaggca gcagcgcgtc cggcaggata
     6601 tgcacaaggt ctttggaaat cgcgtccaac atccccgcac ccttcaaaat ccccaaaaac
     6661 gtacctgccg ccaaaataat ggacgccatc atcaccgcgc cgccggcgtg ggcataaatc
     6721 cgctccatct gttcctgcgg gctgcggtaa ttcaaaagca acgccgccgt tgcagccagc
     6781 ataaatacat aacccggcgg gaagatgccc gaaaaaagca ggctcatcgc cgccaaaaac
     6841 agcaggacat tccaccaaaa cagtttcgga cgcgccaatt tttgttcttc ttccgacaaa
     6901 ggcaccggct ttatcaaatc cgccacggcg ggcaacgcgc ccaactcccg gacaatccgc
     6961 cttttttcac gcacacccaa aagcagggac agcgcaagga taaacactac accgataatt
     7021 tgcaccgtca acaaaggttt atacaattcg cccacatctg cgcccaacac gcttgcaacc
     7081 cgcccagtcg gcccgcccca cggcagaagg ttaatcaatc ccgcactgga agtcagcagc
     7141 aaaaacagca ggtaaggatt catatgcaga cgcttgtaaa gcggcaaaag ggcggggacg
     7201 accaataaaa acgtcgtcgc acccgccccg tccaactgcg ccaccaccga caccaagacc
     7261 gtccccacac tcactgccac gatattaccc cgagtcagct taatcaaacc gcctatcatc
     7321 ggacggaaca gccccacatc gttcatgatt ccaaaaaaca aaatggaaaa cataaacata
     7381 atcacaatct gcatcaccga tttggtgccg cccgaataaa attcttttaa ttgggataca
     7441 tcaaaccccg ccagcaacgc cccaaacagc ggcaccaaga ttaatgcgat gatgggcgac
     7501 actttttccg tcagcagcaa ccatacgatg accccgataa tcagcagtcc gataaacgtc
     7561 agcatcattt ctcctttatt ttattttaaa cagaaaaccg accgtgcagg caaaaccgcc
     7621 cacagacgcg ggataagcct tgcattctac ttttttattt tgaaacaagt caatcggtca
     7681 tttcctccca tttacgcctg ccgccattcc tgtatccgtc cgtcatttca cggcggcaac
     7741 cgatacggaa caaccggcaa accggtatcg ggacggcgcg ggggcattca tcccggtgcg
     7801 ccgattcaaa cgaaaccgcc cctatcattg cggagcgcgg ggcgtgccgt acacgcggga
     7861 t
//
LOCUS       DAWGKF010000092         7841 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.092, whole genome shotgun sequence.
ACCESSION   DAWGKF010000092 DAWGKF010000000
VERSION     DAWGKF010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7841)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7841)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7841
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.092"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..161
                     /locus_tag="WHR07_001373"
     CDS             <1..161
                     /locus_tag="WHR07_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ2130581.1"
                     /translation="IENFWNQAKRVLRKYNGIDRKSFPLFLKECEFRFNFGTPSRQLK
                     ILQDWCGI"
     gene            374..1909
                     /locus_tag="WHR07_001374"
     CDS             374..1909
                     /locus_tag="WHR07_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEZ2130582.1"
                     /translation="MSDSKTKERATFGTRRAFMIAAIGSAVGLGNIWRFPYIAFENGG
                     GAFILPYLVALLTAGIPLLLLDYAIGHRYRGSAPLAFRRLGRWFEPVGWWNVMTNIVI
                     CIYYAVIIGWAASYTYYSVNAAWGADPQGFFFKDFLQMAGPEALGLDFVGKVAGPLAG
                     VWVFTAAIMALGVQKGVARASSFFMPLLLVMFLIMVGISLTLPGAAKGLDALFTPDWS
                     KLADSKVWVAAYGQIFFSLSICFGIMVTYSSYLKKKTDLGGTGLVVGFANSSFELLAG
                     IGVFAALGFMAQAGGKAVNEVASGGIGLAFIAFPTIINQAPMGWLIGILFFGSLVFAG
                     VTSMISILEVIVAAIQDKLNIGRVNATLLVCIPMGIVSTLLFGTATGLPVLDVMDKFV
                     NTYGIVAAGFVYVAAIIISGRLPELRKHLNALSSIRIGGLWTVCVVVTVVMLGYMLFK
                     DTSGLMEKNYEGYPDGFLSIFGWGMSAALVVFGLLLSLLPWKHGQDFNVKDEHEHEQG
                     EEK"
     gene            1906..1998
                     /locus_tag="WHR07_001375"
     CDS             1906..1998
                     /locus_tag="WHR07_001375"
                     /inference="COORDINATES: protein motif:HMM:NF033493.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine/alanine import family NSS transporter
                     small subunit"
                     /protein_id="HEZ2130583.1"
                     /translation="MSTSAIVMMIVSIVIIWGGLLLSLLRLPNE"
     gene            complement(2058..3278)
                     /gene="lysA"
                     /locus_tag="WHR07_001376"
     CDS             complement(2058..3278)
                     /gene="lysA"
                     /locus_tag="WHR07_001376"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HEZ2130584.1"
                     /translation="MTLFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAELS
                     PLVCYAVKANGNLSIIKHFASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAE
                     IEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAPVSLRVNPDVDAKTHPYISTGLKA
                     NKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLTDLSPLVEACERILILVDALAA
                     EGIVLEHLDLGGGVGIVYQDEDVPDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGS
                     LLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAVETKDIATLTANIVGPIC
                     ETGDFLGKDRTIACEEGDLLLIRSAGAYGASMASNYNARNRAAEVLVNGGGYKLIRRR
                     ETLEQQMANELACL"
     gene            complement(3289..3459)
                     /locus_tag="WHR07_001377"
     CDS             complement(3289..3459)
                     /locus_tag="WHR07_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HEZ2130585.1"
                     /translation="MKYGVFFAAATALLLSACGYKGDLYLPKEGDKARFGVIQTGLQL
                     QGKPQSAPPTQK"
     gene            3530..3853
                     /gene="cyaY"
                     /locus_tag="WHR07_001378"
     CDS             3530..3853
                     /gene="cyaY"
                     /locus_tag="WHR07_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HEZ2130586.1"
                     /translation="MMTESEFIRASEALFEHIEDQIDENGWDFDCRFAGNVLTIEAGD
                     GTQIIVNRHTPNQELWIAAKSGGYHFAEQNGKWLATRDSRDFYDVLNEALSAASGEAV
                     EIEEL"
     gene            3884..4303
                     /locus_tag="WHR07_001379"
     CDS             3884..4303
                     /locus_tag="WHR07_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2251 domain-containing protein"
                     /protein_id="HEZ2130587.1"
                     /translation="MAQLPLYRTAEIGNFTVGTPKVLESFSKHIPYGVVFEDDGDTGY
                     FYAASQDGILDALHIYNVEDVSDKHIPNHVLILWDDACTIAALCVNDYIHAVYDFVEQ
                     AGYCRNGFPEAGGEWVKVENRVLDDELLDKILSREPT"
     gene            4325..4831
                     /gene="luxS"
                     /locus_tag="WHR07_001380"
     CDS             4325..4831
                     /gene="luxS"
                     /locus_tag="WHR07_001380"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HEZ2130588.1"
                     /translation="MPLLDSFKVDHTRMHAPAVRVAKTMTTPKGDTITVFDLRFCIPN
                     KEILPEKGIHTLEHLFAGFMRDHLNGNGVEIIDISPMGCRTGFYMSLIGTPSEQQVAD
                     AWLASMQDVGNVKDQSKIPELNEYQCGTYQMHSLAEAQQIAQNVLARKVAVNKNEELT
                     LDEGLLNA"
     gene            4977..7769
                     /gene="polA"
                     /locus_tag="WHR07_001381"
     CDS             4977..7769
                     /gene="polA"
                     /locus_tag="WHR07_001381"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEZ2130589.1"
                     /translation="MSNRPTLLLVDGSSYLYRAYHAMGQNLTAPDGAPTGALYGVLNM
                     LRRLRSEYPHDYCAVVFDAKGKNFRHQMFEEYKATRPPMPDDLRPQAEALPDLVRLTG
                     WPVLVIGQVEADDVIGTLAKQGAEHGLRVIVSTGDKDMAQLVDERVTLVNTMSGETLD
                     IEGVKAKFGVRPDQIRDYLALMGDKVDNVPGVEKCGPKTAVKWLEAYGSLQGVMEHAS
                     EIKGKVGENLRAALPRLPLSYDLVTIKTDVDLHAELSDGIESLRRTAPKWAQLVVDFK
                     RWGFRTWLKEAESNMNTGSTDDVFGSDSIGEQAALNAEMPSEKQAEKATAPERLDYQA
                     VTTEAQFAALLDKLSRANTIGIDTETTSLDAMNASLVGISIAFQAGEAVYIPVGHSLT
                     AAPEQLDLQDVLGRLKPHLGNPALKKIGQNLKYDQHVFANYGIALNGIAGDAMLASYI
                     IESHLGHGLDELSERWLGLETITYESLCGKGAKQIGFADVAIGQATEYAAQDADFALR
                     LEAHLRAQMDEKQLEMYEKMELPVAQVLFEMERNGVQIDRAELARQSAELGAELMKLE
                     QQAYAAADQPFNLNSPKQLQEILFDKMGIPTKGLKKTAKGGISTNEAVLEQLAPDYPL
                     PKIILQNRSLAKLKSTYTDKLPEMISPKDGRVHTTYAQAVAITGRLASNNPNLQNIPI
                     RTAEGRRVRRAFTAPQGSVIVSADYSQIELRIMAHLSGDKTLIAAFQNGEDVHRRTAA
                     EVFGTAPENVSSEQRRYAKTINFGLIYGMGQYGLAKSLGIDNLSAKNFIDRYFARYPG
                     VAEYMQRTKEQAAAQGYVETLFGRRLYLPDIRNKNANARAGAERAAINAPMQGTASDL
                     IKRAMIDVRNCLSDGIGSKLVMQVHDELVLEVVETELDFVKEKLPQIMAKVDGGLLDV
                     PLVAEVGVGENWEEAH"
BASE COUNT         1814 a         2105 c         2130 g         1792 t
ORIGIN      
        1 gcattgagaa cttttggaat caggcaaaac gcgtcttgcg aaaatacaat ggaatcgatc
       61 gcaaatcttt cccgctgttc ttgaaagaat gcgaatttcg atttaacttc ggcacaccgt
      121 cccggcagct aaaaatccta caggattggt gtgggattta gggctaatct agtacagccc
      181 ctaaaatttt tcgttttcaa gccttcaccg cttgccatca gcgttaaatt tttttacgat
      241 aagcacatag attgtaaaca atcggccaca agccggtttg ttttttcaga agacattatc
      301 cctgtcagac gctatttcta tatatttcgc ctataacggc ttgtttttaa taaataattc
      361 aagaggtatc aacgtgtctg attccaaaac gaaagaacgc gccacattcg gcacgcgccg
      421 cgcgtttatg attgccgcca tcggatccgc cgtcggcttg ggcaatattt ggcgtttccc
      481 ctatattgct tttgaaaacg gcggcggcgc gttcatcctg ccctatctgg tcgcgcttct
      541 gacggcgggc attccgctgc tgctgctcga ttatgccatc ggccaccgtt accgtggttc
      601 tgcgcccttg gctttccgcc gcctcggacg ctggtttgag ccggtcggct ggtggaacgt
      661 gatgaccaat atcgtcatct gcatctatta cgcggtaatt atcggttggg cggcaagcta
      721 tacctattat tcggtcaacg ccgcctgggg tgcggatccg cagggttttt tctttaaaga
      781 cttcctgcaa atggcgggcc cggaagcctt ggggttggat tttgtcggca aagtggccgg
      841 tcctttggcg ggcgtgtggg tttttaccgc cgccattatg gctttgggcg tgcaaaaggg
      901 cgtggcgcgc gcctcgtcgt tctttatgcc gctgcttttg gtgatgtttt tgattatggt
      961 cggcatttcg ctgacgttgc cgggcgcggc aaagggcttg gacgcattgt ttacgcccga
     1021 ctggtcgaaa ctcgccgatt ccaaggtctg ggtggcggca tacgggcaga ttttcttttc
     1081 gctttccatc tgcttcggca ttatggttac ctattcttct tatttgaaga aaaaaaccga
     1141 cttgggcgga acggggctgg tggtcggttt tgccaacagc agctttgaac tgctcgcggg
     1201 catcggcgtg tttgccgcat tgggctttat ggcgcaggcg ggcggtaagg cggtcaacga
     1261 ggttgcctca ggcggcatcg gtttggcgtt tatcgccttt ccgaccatta tcaaccaggc
     1321 accgatgggc tggctgatcg gcatattgtt tttcggttcg ctggtattcg ccggcgttac
     1381 gtcgatgatt tccatccttg aagtgattgt ggcggcgatt caggacaagc tgaacatcgg
     1441 gcgcgtcaac gccacgctgc tggtctgcat tccgatgggc attgtttcca cgctgctgtt
     1501 cggtacggcg acggggctgc cggttttgga cgtgatggac aaattcgtca acacctacgg
     1561 cattgttgcc gccggctttg tttatgttgc cgccatcatc atcagcggca ggctgccgga
     1621 attacgcaag cacctgaacg ctttgtcctc catccgcatc ggcggcttgt ggacggtctg
     1681 cgtcgtggtt accgtcgtga tgctcggcta tatgctgttt aaagatacca gcggcctgat
     1741 ggagaaaaat tacgaaggtt atccggatgg tttcctcagt attttcggct gggggatgtc
     1801 ggcggcgttg gtcgtgttcg ggctgctgct gtcgttgctg ccttggaaac acggtcagga
     1861 tttcaacgtc aaagacgaac acgaacatga acaaggagaa gaaaaatgag tacttccgcc
     1921 attgtgatga tgattgtctc aatcgtgata atctggggag ggctgctgct ttccctgtta
     1981 aggctgccga acgagtaagc ctttagagcg ttaaaaatgc cgtctgaact gtttcagacg
     2041 gcattttgat gttcggctta caggcaggcg agttcgtttg ccatttgctg ttctaaggtt
     2101 tcgcgtcggc ggatgagttt gtatccgcca ccgttaacca acacttccgc cgcacggttg
     2161 cgcgcgttgt aattgctcgc catactggcc ccgtatgcgc ccgcgctgcg gataagcagc
     2221 aaatcccctt cttcgcaggc gatggtgcgg tctttgccga ggaagtcgcc ggtttcgcaa
     2281 atcggaccga cgatgttggc ggtcagcgtc gcgatgtctt tggtttcgac cgcctcgatg
     2341 tgatgatagg catcataaag cgccgggcgc atcaaatcgt tcatcgccgc atcgaccatc
     2401 acaaagtttt tctcttcgcc gtatttgaca aactcgacgc gtgtcagcag cgaacctgcg
     2461 ttgccgacca ggctgcggcc gggctcaaga atgagtttca gacggcgtgt gccgatcagt
     2521 ttttgaacgg cttgggcata cgcgcccaaa tcaggcacat cttcgtcttg gtaaacaatg
     2581 ccgacgccgc cgcccaagtc caagtgttcc aacacaatgc cttcggcggc aagcgcgtca
     2641 accaaaatca aaatgcgctc gcaggcttcg acaagcggac ttaagtcggt tagttgggag
     2701 ccgatgtggc agtcgatgcc gatgattttc aaattgggct gttgtgcggc gtggcggtag
     2761 gcttcgagcg cgtcggcgta ggcgatgccg aatttgttgg ctttcagacc tgtggagatg
     2821 tagggatggg ttttcgcatc gacatcggga ttgacgcgca gggagacggg cgcggtttta
     2881 cccaaacgcg cggcaacttt ctgaatacgg tcgatttcgg ggatgctttc catattgaag
     2941 catttcacgc ctgcattcag cgcgaactcg atttccgcct cgcttttgcc tacgcctgaa
     3001 aatatggttt ttgccgcgtc gccgcctgcc gccaaaacgc gtgccaattc gccgccggac
     3061 acaatgtcaa aaccgctccc caaagaagca aagtgtttga tgatgctcag gttgccattg
     3121 gctttaaccg catagcagac gagcggggag agctcggcaa aggcagtttg gtagtgttca
     3181 aatgcttcgg tcagcgcgga ttggctgtac acataaagcg gtgtgccgaa tgcttcggca
     3241 aggcgggggt aggggacttg ttcgcaaaat agggtcatat tttcgttttc atttttgggt
     3301 tggaggggcg gattgcggtt tgccttgaag ctgcaaaccg gtttggatta cgccgaaacg
     3361 cgccttgtcg ccttctttgg gcaggtagag gtcgcctttg taaccgcagg ccgagagcag
     3421 gagggcggtt gccgccgcaa aaaatacgcc gtatttcatc ggtaaacttc cttcataagc
     3481 gcgaatgtgg caagattcgg catcttaaac aaaaaacacg caaaaagcta tgatgaccga
     3541 aagcgagttt atccgcgcga gcgaagcatt atttgaacac atcgaagacc aaatcgacga
     3601 aaacggctgg gatttcgact gccggtttgc cggaaacgtc ctgaccatcg aagccggaga
     3661 cggcacgcaa atcatcgtca accgccacac gcccaatcag gaattgtgga ttgccgcaaa
     3721 aagcggcggc taccatttcg ccgaacaaaa cggcaaatgg ctggcaacgc gcgacagccg
     3781 cgatttttat gatgttttga acgaagcact gagcgcggct tcgggcgaag cggttgagat
     3841 tgaggaattg tgattcaatt tgatataaaa agattgttac ccaatggcac aattacctct
     3901 atatcggact gccgaaatcg gaaattttac tgtcggcacg cctaaagttt tagaatcatt
     3961 ttccaaacat atcccttatg gtgtcgtctt tgaagacgac ggcgacacgg gctacttcta
     4021 tgctgcttcg caagacggga ttttagatgc cttgcacatc tacaatgtcg aagatgtatc
     4081 cgacaaacat atccccaatc atgtcttgat tttatgggat gatgcctgca ccatagccgc
     4141 attgtgtgtc aacgactaca ttcatgccgt ctatgatttt gtcgaacagg caggatattg
     4201 ccgcaacggc ttccctgaag caggcggcga atgggtgaaa gtcgaaaacc gcgtcttgga
     4261 tgatgaattg ctggacaaaa tcctatcccg agaacctaca taaccctcac aaaaggatac
     4321 ccaaatgccc ctactagaca gtttcaaagt cgatcacacc cgtatgcatg cccccgccgt
     4381 acgcgtggcg aaaaccatga ccacgcccaa aggcgacacc attaccgtgt tcgacctgcg
     4441 cttttgcatt cccaacaaag aaatcctgcc tgaaaaaggc atacacacgc tggagcattt
     4501 gttcgcaggt tttatgcgcg accacttgaa cggcaacggc gtggaaatca tcgacatttc
     4561 cccgatgggc tgccgcaccg gtttctacat gagccttatc ggcacgcctt ccgaacagca
     4621 ggtcgccgat gcatggctcg cctcgatgca ggatgtgggc aatgtcaaag accaaagcaa
     4681 aatccccgag ttgaacgaat accaatgcgg cacttatcaa atgcactcgc tcgccgaagc
     4741 gcagcaaatc gcgcaaaacg tgttggcgcg caaagtggcg gtgaacaaaa acgaagagct
     4801 gacgctggat gaagggctgc tgaacgccta atccgccaaa aatgccgtct gaacaagggt
     4861 ttcagacggc atttgccttt tccgttataa tccggggttg tgcggggtcg ggttttaagc
     4921 cggcatcgtc cttccctatt tttttctgtc ccttatcggt tttaagcggg ttttttatgt
     4981 ccaacagacc tacactcctc ctcgttgacg gctcgtccta cctctaccgt gcgtatcacg
     5041 cgatggggca aaacctgacc gcccccgacg gcgcgccgac gggtgcgctg tatggcgtat
     5101 tgaatatgtt gcgccgtttg cggtcggaat atccgcacga ttattgcgcg gtggtttttg
     5161 atgcgaaagg caaaaatttc cgccatcaaa tgtttgaaga atacaaggcg acgcgcccgc
     5221 cgatgcccga cgatttgcgc ccgcaggcgg aagcactgcc ggatttagtg cgcctgacag
     5281 gctggccggt attggtgatt gggcaggtgg aggcggacga tgtgatcggc acgctggcga
     5341 aacagggggc ggaacatggt ttgcgagtca ttgtttcgac cggcgataag gacatggcgc
     5401 agttggtgga tgagcgcgtt acgctggtga acacgatgag cggagaaacg ctggatattg
     5461 aaggcgtgaa ggcaaaattc ggcgtgcgcc ccgaccaaat ccgcgattat ctcgcgctga
     5521 tgggcgacaa ggtggacaac gtgccgggcg tggaaaaatg tggcccgaaa acggcagtga
     5581 agtggctgga agcctacggc tcgttgcaag gcgtgatgga acacgcttcg gaaatcaagg
     5641 gcaaagtggg cgagaatctg cgtgccgccc tgccgcgcct gccgctgtcg tatgatttgg
     5701 taacgattaa aaccgatgtg gacttgcacg ccgagctttc agacggcatc gaaagcctgc
     5761 gccgtaccgc gccgaaatgg gcgcaactgg ttgtcgattt caaacgctgg ggcttccgca
     5821 cctggctgaa agaagcggaa tcaaacatga ataccggctc gaccgatgat gtgttcggca
     5881 gcgacagcat cggtgagcag gcggctttga atgcggaaat gccgtctgaa aaacaagctg
     5941 aaaaagccac cgcccccgaa aggctggatt atcaagccgt taccaccgaa gcgcagtttg
     6001 ccgctttgtt ggacaaactg tcgcgggcga acacaatcgg catcgatacg gaaaccacgt
     6061 cattagacgc gatgaacgcc tcgctggtcg gcatcagcat cgctttccaa gcaggcgaag
     6121 cggtttacat ccccgtagga cacagcctga ccgcagcgcc tgaacagctt gatttacaag
     6181 acgtattagg ccgtctgaaa ccgcatttgg gaaaccccgc cctaaaaaaa atcgggcaaa
     6241 acctcaaata cgaccaacac gttttcgcca actacggcat cgccctgaac ggcattgccg
     6301 gcgacgccat gctcgcttcc tacatcatcg agagccatct cggacacggc ttggacgaat
     6361 tgtccgaacg ctggctcggc ttggaaacca ttacctacga atcgctgtgc ggcaaaggcg
     6421 cgaagcaaat cggttttgcc gatgtcgcca tcgggcaggc gaccgaatac gccgcccaag
     6481 acgccgattt cgccctgcgc ctcgaagcgc acctgcgcgc gcaaatggac gaaaaacagc
     6541 ttgaaatgta tgaaaaaatg gagctgcccg tcgcgcaggt attgtttgaa atggaacgca
     6601 acggcgtgca aatcgaccgc gccgaactcg cccgccaaag cgcggaactc ggcgccgagc
     6661 tgatgaagct cgaacaacaa gcctatgccg ccgcagacca gccgttcaac ctcaattcgc
     6721 ccaaacagct gcaagaaatc ctgttcgaca aaatgggcat ccccaccaaa ggcctgaaaa
     6781 aaaccgccaa aggcggcatt tccaccaacg aagccgtgct cgaacagctc gcgcccgact
     6841 accccctgcc taaaatcatc ctgcaaaacc gcagcctggc gaagctcaaa tccacctaca
     6901 ccgacaaact acccgaaatg atttccccca aggacggccg cgtgcatacc acctacgccc
     6961 aagccgtcgc cattaccggc cgcctcgcca gcaacaaccc caacctgcaa aacatcccca
     7021 tccgcaccgc cgaaggccgc cgcgtgcgcc gcgcctttac cgcaccgcaa ggcagcgtca
     7081 tcgtttccgc cgactattcc caaatcgagc tgcgcattat ggcgcacctc tccggcgaca
     7141 aaaccctgat tgccgcgttc caaaacggcg aagacgtaca ccgccgcacc gccgccgaag
     7201 tgttcggcac tgcgcccgaa aacgtctcgt ccgagcaacg ccgctacgcc aaaaccatca
     7261 acttcggctt aatttacggt atggggcaat acggtttggc aaaatcattg ggcatcgaca
     7321 acctttccgc caaaaacttt atcgaccgct acttcgcccg ctaccccggc gtcgccgaat
     7381 acatgcagcg caccaaagaa caagccgccg cccaaggcta cgtcgaaacc ctgttcggca
     7441 gaaggctcta tttgcccgac atccgcaaca aaaacgccaa cgcccgcgca ggagccgagc
     7501 gcgccgccat caatgccccc atgcaaggca ccgcgtccga cctcatcaaa cgcgccatga
     7561 tagacgtgcg aaactgtctt tcagacggca tcggcagcaa actggtcatg caggtgcatg
     7621 acgaactggt gctggaagtc gttgaaaccg aactggattt tgtcaaagaa aaactgccgc
     7681 agattatggc gaaagtggac ggcggattat tggatgtacc gctggtggct gaggttggcg
     7741 taggggagaa ttgggaagag gcacattgat tgaaaggtgt tatatgctat ctttatttaa
     7801 ataaaattta atttttggta tattttttct aaatgttcct a
//
LOCUS       DAWGKF010000093         7747 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.093, whole genome shotgun sequence.
ACCESSION   DAWGKF010000093 DAWGKF010000000
VERSION     DAWGKF010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7747)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7747)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7747
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.093"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(13..1215)
                     /gene="trpB"
                     /locus_tag="WHR07_001382"
     CDS             complement(13..1215)
                     /gene="trpB"
                     /locus_tag="WHR07_001382"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEZ2130590.1"
                     /translation="MKNYHAPDEKGFFGEHGGLFVSETLIPALQELADAYKAAKNDPE
                     FWEAFRHDLKHYVGRPSPVYHAARLSEHLGGAQIWLKREDLNHTGAHKVNNTIGQALL
                     AKRMGKKRVIAETGAGQHGVASATVAARFGMTCDVYMGADDIQRQMPNVFRMKLLGAN
                     VVGVESGSRTLKDAMNEAMREWVARVDDTFYIIGTAAGPAPYPEMVRDFQCVIGNEAK
                     AQMQEAIGRQPDVAVACVGGGSNAIGLFHPYIGEENVRLVGVEAGGLGVNTPDHAAPI
                     TSGAPIGVLHGFRSYLMQDENGQVLGTHSVSAGLDYPGIGPEHSHLHDIKRVEYTVAK
                     DDEALEAFDLLCRFEGIIPALESSHAVAWAVKNAPKMGKDQVILVNLSGRGDKDINTV
                     AKLKGIKL"
     gene            complement(1400..2110)
                     /locus_tag="WHR07_001383"
     CDS             complement(1400..2110)
                     /locus_tag="WHR07_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA glycosylase"
                     /protein_id="HEZ2130591.1"
                     /translation="MLFEGLPCLAVWCKNRLSAVLPVGGLNVSENLLEIETHPFDSVL
                     PPKAAVMMMGTFPPKEDKRAMQFHYPNFQNDMWRVYGLVFFGDADYFKVPSNGEAAHS
                     EKAFDAEKIKAFLHERGIASCPTVLKAVRQHGNASDKFLKVVETVDLAAVLAKIPECR
                     HICTTGGKATEILLDIQGGGIKMPKTGETVPFPFAGRDLTLTRLPSTSRAYPLSLAKK
                     AAAYRAFFEMAGLCEKQL"
     gene            2307..3086
                     /gene="rsmA"
                     /locus_tag="WHR07_001384"
     CDS             2307..3086
                     /gene="rsmA"
                     /locus_tag="WHR07_001384"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEZ2130592.1"
                     /translation="MKEHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLA
                     AITEPLAKKLNRLHVVEIDRDIVCRLKTLPFADKLVIHEGDVLQFDFNGIAGKKKIVG
                     NLPYNISTPLLFKLAEVADDVVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDM
                     EMLIDVPPESFDPAPKVDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNN
                     LKELAGDDDLQAVGINPQDRAEHIAPEKYVALSNYLAGKAV"
     gene            3259..3987
                     /locus_tag="WHR07_001385"
     CDS             3259..3987
                     /locus_tag="WHR07_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEZ2130593.1"
                     /translation="MIKFKNVHKHFKDLHVINGVNLEIKKGEVVVVCGPSGSGKSTLI
                     RTVNQLESIESGEIWVDGVNVADPKTDLNKIREEVGFVFQSFNLYPHLTVLENITLAP
                     MKVKGQNAEQAEKKAMELLERVGLAHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLF
                     DEPTSALDPEMVGEVLKVMKDLAESGMTMMCVTHEMGFAREVADRVIFVDKGQILEDE
                     TPEAFFTNPKHERAKQFLQQVMTH"
     gene            4060..4419
                     /locus_tag="WHR07_001386"
     CDS             4060..4419
                     /locus_tag="WHR07_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130594.1"
                     /translation="MYFVDRTAVVLKPTARFLEWLKSTDENMPDLTIEQLRANCSVFL
                     VPQFDEPEAVVSYFDERYRQIFEAELAGWDINKDKWPQDMGLKAFWEFFDIEIHDMVL
                     DMEEAELNITPVFDNMM"
     gene            4424..4864
                     /locus_tag="WHR07_001387"
     CDS             4424..4864
                     /locus_tag="WHR07_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator FolI"
                     /protein_id="HEZ2130595.1"
                     /translation="MRAFQTALRPSRILNILTVSLHSASFAVCLTWFYGRMMWFGLAA
                     LVASYAYSLRITNLKHRHAITAITIDRDGQAEIVSGKDKTAATLAGSSMVTPYALFLQ
                     WDTGGKTVSQCIIPDMTDKESYRRLKVWVLWRQPKKTAETDTPS"
     gene            4896..6170
                     /gene="folC"
                     /locus_tag="WHR07_001388"
     CDS             4896..6170
                     /gene="folC"
                     /locus_tag="WHR07_001388"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HEZ2130596.1"
                     /translation="MKTLQDWLSHLETAHSGGLIDMGLERVGEVKKRMKLTPQCPVVV
                     VAGTNGKGSVCAYLTQIYKQAGFKVGTLTSPHLLRYNERIAVNAEPVSDDTIIASFER
                     IEAARGEISLTYFEFNALAAVDIFMREQVDVMILEVGLGGRLDAVNAFDGDCAVVTSV
                     DLDHQAFLGDTVEQVGFEKAGVFRSGKPAICGQNPAPASLVAHAEAIGAKLLMVQRDF
                     EFHALENIQWNYRFHPQHSDDPTRNRNALPFPALRGAYQLSNAACTLTVLECLNDKLP
                     VDIGAIKRGLLLVENPGRFQVLPGRPLTVLDVGHNPHAARALRRSLINLAFAQKRTAV
                     FSMLSDKDIDGVLEIVKDQFDEWYIAPLDVPRGMTLESLQNKLHEHGIENIQTFAAVR
                     EAYRAAASKAGENDRIVVFGSFHTVADVMSVL"
     gene            6183..7181
                     /gene="ftsN"
                     /locus_tag="WHR07_001389"
     CDS             6183..7181
                     /gene="ftsN"
                     /locus_tag="WHR07_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HEZ2130597.1"
                     /translation="MSENKQNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSS
                     GPAEQTAGETNGVENKAAGAAQTPALKSAADKPQDLAGEDKPSAADSEISEPENVGAP
                     LVLINDRLEDSNIKGLEASEKLQQAETAKTAPKQAKQRAAEKVPATADSTDTVAVEKP
                     KRTAETKPQKAERTAKAKPKAKETKTAEKVADKPKTAAEKTKPDTAKSDSAVKETKKA
                     DKAESKKTAEKDRSDGKKHETAQKTDKADKTKTAEKEKSGKKAAIQAGYAEKERALSL
                     QRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKNARDAERDLNKLRVHGIAGQVTNE"
     gene            7174..7671
                     /locus_tag="WHR07_001390"
     CDS             7174..7671
                     /locus_tag="WHR07_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HEZ2130598.1"
                     /translation="MNNLPVADLLVFAIIAACIVLSAMRGVIAEAGSMAAWVVSFFFA
                     KLFAAPFADLAFASFQPRLFALALSFISLFVIACLIQKMLRSLLTGAVSAVGLGFANR
                     ILGGVFGALKGILIITLLVMLASKTDLPDTEEWRQSYTLPFFVSLSEAVLNHSGGTAE
                     TPEDD"
BASE COUNT         1942 a         2201 c         1996 g         1608 t
ORIGIN      
        1 agacggacga ggttacagtt taatcccttt gagcttcgcg acggtattga tgtctttgtc
       61 gccacgaccg gataggttga ccagaatcac ttggtctttg cccattttcg gcgcgttttt
      121 caccgcccaa gcaacggcgt ggctggattc gagcgcgggg atgatgccct cgaagcggca
      181 gagcaagtca aaggcttcga gtgcttcgtc gtctttggca acagtgtatt cgacgcgctt
      241 gatgtcgtgc agatggctgt gttccgggcc gatgccgggg taatccaagc ctgcggaaac
      301 agagtgcgta cccaaaacct gaccgttttc gtcctgcatc agatagctgc ggaaaccgtg
      361 caatacgcca atcggtgcgc ccgaagtaat cggcgcggcg tgatcggggg tgttcacgcc
      421 caaaccgcca gcctccacgc cgacgaggcg cacgttttct tcgccgatat acgggtggaa
      481 caaaccgatg gcgttcgatc cgccgcccac gcaggcaacg gcaacgtcgg gctgtctgcc
      541 gatggcttcc tgcatctgcg ctttagcttc gttgccaatc acgcattgga aatcgcgcac
      601 catttcggga tacggcgcgg ggccggcggc ggtaccgatg atgtagaacg tgtcgtccac
      661 gcgggcgacc cattcgcgca tggcttcgtt catcgcgtct ttcagcgtgc ggctgccgct
      721 ttctacacca accacgttcg cacccaataa tttcatacgg aacacgttgg gcatttggcg
      781 ttggatgtcg tccgcgccca tatacacgtc gcaagtcata ccgaagcgtg cggcaacggt
      841 ggcactcgcc acgccgtgct gacccgcgcc ggtttcggcg atgacgcgtt ttttacccat
      901 gcgttttgcc aacagtgcct gaccgatggt gttgttgact ttgtgcgcgc cggtgtggtt
      961 caagtcttcg cgcttcaacc agatttgcgc accgcccaga tgttcggaca accgcgcggc
     1021 gtggtaaacg gggctgggcc tgccgacata atgtttcaaa tcatggcgga acgcttccca
     1081 aaattcagga tcgtttttcg ctgccttata ggcatccgcc agctcttgca aagccggaat
     1141 cagggtctcg gacacgaaca gcccgccgtg ttcgccgaaa aagcccttct cgtcgggcgc
     1201 gtggtagttc ttcatcagat ttcgtccttg tgcttcaaat tttcagacgg caatttatag
     1261 tggattaaca aaaaccggta cggcgttgcc ccgccttgcc gtactatttg tactgtctgc
     1321 ggcttcgccg ccttgtcctg atttttgtta atccactata tttttcaaac atgccgtccg
     1381 aacgggaaat tgtcggcaat tataactgtt tttcacacaa acccgccatt tcgaaaaacg
     1441 cccgatacgc cgccgccttt ttcgccaaac tcaaaggata ggcacgcgaa gtcgaaggca
     1501 ggcgcgtcag cgtcaaatcc cgtccggcaa acggaaacgg cacggtttcg cccgttttcg
     1561 gcattttgat gccgccacct tgaatatcga gcaggatttc cgtcgccttg ccgcctgtcg
     1621 tacaaatatg gcggcactcg ggtatttttg ccaacaccgc cgccaaatcg acggtttcaa
     1681 ctacctttaa aaacttgtcg gacgcattgc cgtgctgacg taccgccttc aaaacggtcg
     1741 gacaggacgc aatcccccgt tcgtgcaaaa acgccttgat tttctcggca tcaaacgctt
     1801 tttcagagtg cgcagcctcc ccgttggacg gcactttgaa ataatccgca tcgccgaaaa
     1861 acaccagccc gtaaacgcgc cacatatcgt tttggaaatt cggataatga aactgcatcg
     1921 cgcgtttgtc ttccttgggc ggaaacgtcc ccatcatcat gaccgcagcc ttcggcggca
     1981 acacggaatc gaagggatgg gtttcgattt caagcagatt ttcagacacg ttcaatcctc
     2041 caacaggcaa aacggcagac agccggtttt tgcaccaaac cgccaaacac ggcaagcctt
     2101 caaacagcat tatcacgccc tgccgttttc ggttacaatg ccgacatcaa acggatactg
     2161 taaacacatt tatgtttcaa cacacaggac gacacataaa gcaccgccct atgtgccatc
     2221 ctgatttgga aggggttacg cccctcccaa atagagtctg attctaccgc cctaaagggc
     2281 ggggtttcaa ccgaaaagga aacacgatga aagaacacaa agcccgcaag cgtttcgggc
     2341 agaatttttt gcaggacacg cggattatca gcgatattgt caacgccgtg cgcccgcagg
     2401 cggatgatgt cgtgattgaa atcggtccgg gtttggcggc gattaccgaa cctttggcga
     2461 aaaagctgaa ccgcctgcac gttgtcgaaa tcgaccgcga catcgtatgc cgtctgaaaa
     2521 cgctgccgtt tgcggataaa ctggtgattc acgaaggcga tgtattgcag tttgatttca
     2581 acggcatcgc aggcaaaaag aaaatcgtcg gcaacctccc gtacaacatt tccacaccgc
     2641 ttttgttcaa gctggcggag gtggcggacg atgtcgtcga tatgcacttt atgctgcaaa
     2701 aagaagtggt cgagcgtatg gttgccgcgc cgaaaagcaa cgactacggc cgcttgggcg
     2761 tgatgctgca atattttttc gatatggaaa tgctgattga cgtaccgccc gaatcgttcg
     2821 accctgcgcc gaaagtggat tccgccgtcg tccgtatgat tccggtgaaa caccgcatcg
     2881 gcaaggcgga cgatttcgag catttcgcca aactggtgaa actcgccttc caccaacgcc
     2941 gcaaaaccat acgcaacaac ctgaaagagc ttgcaggcga cgatgatttg caggctgtcg
     3001 gcatcaatcc gcaagaccgt gccgaacaca tcgcgccgga aaaatacgta gcgttgagca
     3061 attatctggc gggcaaggcc gtctgaaaag ggagtaagcc gatgaagaaa tacctgcttt
     3121 tacccctgat actgccgctt gcagcctgcc tgaccaatcc gaacgaccgt ttttttgacg
     3181 gcagacgcta cacgcttcat catatggagc tcccgtaacg acaacctgca acggcaaatg
     3241 ccgtctgaaa gaaaagacat gatcaaattc aaaaacgtac acaaacattt caaagacctg
     3301 cacgtcatca acggcgtgaa cttggaaatc aaaaaaggcg aagtggtcgt cgtctgcggg
     3361 ccttcgggca gcggcaaatc cacactcatc cgcaccgtca accagcttga aagcatcgaa
     3421 agcggcgaga tttgggtgga cggtgtcaac gttgccgacc caaaaaccga tttgaacaaa
     3481 atccgcgaag aagtcggctt tgtgtttcaa agtttcaacc tctacccgca cctgaccgtg
     3541 ttggaaaaca ttaccctcgc accgatgaag gttaaggggc aaaatgcgga acaggcggag
     3601 aaaaaggcaa tggagctttt ggaacgcgtc ggactggcac acaaaaaaga cgccttccct
     3661 tcccaacttt ccggcggcca gcagcaacgc gtggcgattg cacgcggttt ggcgatggaa
     3721 ccgcgcgtaa tgttgtttga cgaaccgacc tccgcactcg accccgaaat ggtcggcgaa
     3781 gtgttgaaag tgatgaaaga cttggcagaa agcggcatga ccatgatgtg cgtaacccac
     3841 gaaatggggt ttgcccgcga agttgccgac cgcgtgattt tcgtcgataa agggcaaatc
     3901 ctcgaagacg aaacgccgga agcgtttttt accaacccga aacacgaacg cgccaagcag
     3961 ttcctgcaac aggtcatgac ccattgatgc tatgccgtct gaaaaccgaa cgttcagaca
     4021 gcatatcccg acaccgcaag atgattgaga aagaaaacca tgtattttgt tgaccgcacc
     4081 gccgtcgtcc tcaagccgac cgcgcgcttt ttggaatggc tcaaaagcac cgacgaaaat
     4141 atgcccgacc tgaccataga gcagcttcgt gccaactgtt ccgtcttcct cgttccgcag
     4201 ttcgacgaac cggaagccgt cgtttcctac ttcgacgaac gctaccgcca gattttcgag
     4261 gcggagctgg caggttggga catcaataag gataaatggc cgcaagatat ggggctgaag
     4321 gcgttttggg aatttttcga catcgaaatc cacgatatgg tgttggacat ggaagaagcg
     4381 gaattgaaca ttacccccgt gttcgacaac atgatgtaag gctgtgcgcg cctttcagac
     4441 ggcattgagg ccgtcccgca tcctgaacat cctgaccgta tcgctccact cggcttcctt
     4501 tgccgtctgc ctgacctggt tttacggccg gatgatgtgg ttcggtttgg cggctttggt
     4561 ggcaagttac gcatactcgc tcaggataac gaatctgaaa caccgccatg ccataaccgc
     4621 cattaccata gaccgcgacg gacaggcgga aatcgtatcc ggcaaagaca aaacagcggc
     4681 aacacttgcg ggcagcagta tggttacgcc ttatgcctta ttcttacaat gggacaccgg
     4741 cggcaaaacc gtcagccaat gcatcatacc cgacatgacg gacaaagaat cctaccggcg
     4801 gctgaaagtc tgggtgcttt ggcggcagcc gaaaaaaacc gccgaaaccg atacaccaag
     4861 ctgatttcag acggcatttg aacacggaac actcaatgaa aacactgcaa gactggctct
     4921 cccatttgga aaccgcccac agcggtggct tgatcgatat gggcttggaa cgcgtaggcg
     4981 aagtgaaaaa acggatgaag ctcacgccgc aatgccccgt cgtcgttgtc gcgggaacaa
     5041 acggcaaagg ttcggtctgc gcctacctga cacagattta caaacaggca ggctttaaag
     5101 tcggtacgct gaccagcccg catttattgc gttacaacga acgcatcgcc gtcaacgccg
     5161 aacccgtttc ggacgatacg attattgcct ctttcgagcg catcgaagcg gcgcgcggcg
     5221 aaatatcgct gacttatttt gaattcaatg ccttggcggc cgtcgacatc ttcatgcgcg
     5281 aacaggttga cgtgatgata ttggaagtcg gcttgggcgg acgcttggac gcggtcaacg
     5341 catttgacgg cgattgcgcg gtggttacca gcgtggattt ggaccatcag gcgtttttgg
     5401 gcgatacggt cgagcaggtc ggctttgaaa aagcaggcgt gttccgcagc ggcaaacccg
     5461 ccatctgcgg tcaaaacccc gcgcccgcat cattggtcgc acacgccgaa gccataggcg
     5521 cgaaactgct gatggtgcag cgcgatttcg agtttcacgc gctggaaaac atccaatgga
     5581 actaccgctt ccatccgcaa cattcagacg accccacgcg caaccgcaat gccctgccct
     5641 tccccgcatt gcgtggcgca taccagcttt ccaacgccgc ctgcacgttg accgtattgg
     5701 aatgcttgaa cgacaaattg cctgtggaca tcggcgccat caaacgcgga ttgctgctgg
     5761 ttgaaaatcc cggccgcttc caagtcctgc ccggccgtcc gctgaccgtt ttggatgtcg
     5821 gacacaatcc ccacgctgcc cgcgccctgc gccgcagcct gattaatttg gcgtttgcgc
     5881 aaaaacgcac cgccgtattc agtatgctgt ccgacaaaga catagacggc gtgttggaaa
     5941 tcgttaaaga ccagtttgac gagtggtata tcgcaccgtt ggatgtaccg cgcggcatga
     6001 cgctcgagag cctgcaaaac aaactgcacg aacacggcat cgaaaacata cagacattcg
     6061 ccgccgtccg cgaagcatac cgggcggcag cctcaaaagc gggcgagaac gacagaatcg
     6121 tcgttttcgg ctcatttcat accgttgccg atgtcatgtc ggtactttaa aaggaaactt
     6181 ctatgtccga aaacaaacaa aacgaagtcc tgagcggtta cgaacaactc aaacggcgca
     6241 accgccgccg cctcgtaacg gcaagttgcc tggttgccgc ctcctgcatc ctgctggcag
     6301 ccgccctcag ttccggccct gccgaacaga ctgccggcga aacaaacggc gtagaaaaca
     6361 aagcggcagg tgcggcacaa acccctgcct tgaaatccgc cgccgacaaa ccgcaggact
     6421 tggcaggcga agacaagcct tctgccgccg acagcgaaat cagcgagcct gaaaacgtag
     6481 gcgcgccgct ggtgctgatt aacgaccgcc tcgaagacag caacatcaaa ggtttggaag
     6541 catccgagaa actgcaacag gcagaaaccg ccaaaaccgc accgaagcag gcaaaacaac
     6601 gcgctgccga aaaagtgccg gcaactgccg acagtacgga tacggtagcg gttgaaaaac
     6661 cgaaacgcac tgccgaaaca aaaccgcaaa aagcggaacg cactgccaaa gccaagccca
     6721 aagccaaaga aaccaaaacc gccgaaaaag ttgccgacaa accgaaaact gccgccgaaa
     6781 aaaccaaacc ggatacggca aaatccgaca gcgcggtaaa agaaacgaaa aaagccgaca
     6841 aggctgaaag caaaaaaaca gccgaaaaag accgttcgga cggcaaaaaa cacgaaacgg
     6901 cacaaaaaac cgacaaagcg gacaagacca aaaccgccga gaaggaaaaa tccggtaaaa
     6961 aagccgccat tcaggcaggt tatgccgaaa aagaacgcgc cttaagcctc cagcgcaaaa
     7021 tgaaagcggc gggtatcgat tcgaccatca ccgaaattat gaccgacaac ggcaaagttt
     7081 accgcgtcaa atcaagcaac tataaaaacg caagggatgc cgaacgcgat ttgaacaaat
     7141 tgcgcgtaca cggtatcgcc ggtcaggtaa cgaatgaata acctccccgt tgccgacctc
     7201 ctcgtcttcg ccatcatcgc cgcctgcatc gtgctatccg cgatgcgcgg cgtgattgcg
     7261 gaggcaggtt cgatggcggc atgggtggtt tccttctttt ttgccaaact ctttgccgca
     7321 cccttcgccg acctcgcctt tgcctcgttc caaccccgcc tgtttgcatt ggctctgtcg
     7381 ttcatttccc tgttcgtcat tgcctgtctg atccagaaaa tgctccgttc gctgctgacc
     7441 ggcgcagttt cggcggtcgg tttgggcttt gccaaccgca ttttgggcgg cgtattcggt
     7501 gcattgaaag gcattttgat tattaccctg ctggtcatgc tcgcttcaaa aaccgacctg
     7561 cccgataccg aagaatggcg gcaatcttac acactgccgt ttttcgtatc gctttccgaa
     7621 gccgtgttga accatagcgg cggcacggcg gaaactccgg aagacgattg attgccctgc
     7681 tggcgtttca gacggcattc tcttttatgc cgtctgaaat gttttttcct ttcctcagcc
     7741 atatcac
//
LOCUS       DAWGKF010000094         7688 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.094, whole genome shotgun sequence.
ACCESSION   DAWGKF010000094 DAWGKF010000000
VERSION     DAWGKF010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7688)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7688)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7688
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.094"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(181..1482)
                     /locus_tag="WHR07_001391"
     CDS             complement(181..1482)
                     /locus_tag="WHR07_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HEZ2130599.1"
                     /translation="MPSETARPLYADTCAAHTLVWFRQNLRIRDNAALCAAVAEGLPV
                     IGIWIDDAETDNPRRAAFYRQSAAELAQGLAGRGIPLYTAASPAELVRLAVRLNIRAV
                     IADESHTFADKLADNALWHELDKHGIALTFVNDRAVFGKTDLIPDGGTAHTDFDRYRE
                     VWLDRFSKQPPAGPDLFAAYRQPFPENLSAPPPAALSDGIFLPQNSGETAAWRQWRRF
                     LEQADSYSVLKDFPSRKHTSLMGAYLSAGCISPRLLARESLERRLNAWADNIIRRDFF
                     LQLALQHTDDDPSDGNPEHTLRLTLWQQGQTGIPIIDAAMRCLHKTGSLHPALRRLSA
                     DFFCHVLNLPRREGEIWFARQLTDFDAAINQGNWRLAASRHTCPDIAAAAHKTDPDGT
                     FVRRHIPELAHLSADTVHTPWRFACSVDTHGYPAYPVAGIP"
     gene            complement(1472..2383)
                     /locus_tag="WHR07_001392"
     CDS             complement(1472..2383)
                     /locus_tag="WHR07_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEZ2130600.1"
                     /translation="MDTLFSLKVFRQVVQSGGFTRAAGALGISTAMASKHVSHLENTV
                     QAKLLHRNSRNLSLTEAGEEYYRQCSYALDTLDDAAQKAAGGTEKPQGLLRVTMPLWF
                     AGSQICNWLAEYRERYPEVTLELILDNRHVDLIAEGVDLALRVSQTLSPSLIARPLAE
                     IEFALLASPDFLRRNGVPETPEEVAGLPAVLPTYTNQQKLDLTRKSDGKKYRLELTPV
                     IRTDNTLMMREMIKAGACIGYQPLWAAEHDLRCGSLVRLLPEYTVPTDRLNAVYADRA
                     FLSAKVRSFIDFLNEKIASRKGYRNAV"
     gene            2491..2889
                     /locus_tag="WHR07_001393"
     CDS             2491..2889
                     /locus_tag="WHR07_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEZ2130601.1"
                     /translation="MSDCCNRIQPVLLSVLRIVTAYLFLLHGTSKIFAFPIEMGSGSP
                     GGLLLLAGILEIVGGILLVLGLFARPAAFVLSGQMAVAYFMAHASGNALFPIANGGES
                     AVLFCFVFLYIAAAGGGAWSLDRLFFKRKA"
     gene            2938..3543
                     /locus_tag="WHR07_001394"
     CDS             2938..3543
                     /locus_tag="WHR07_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEZ2130602.1"
                     /translation="MTRQSLQQAAESRRSIYSLNKNLPVGKDEIVQIVEHAVLHTPSS
                     FNSQSARVVVLFGEEHDKVWQFVEDALCAVVPADSFEPTAQKLNLFKAGAATILFYED
                     QNVVKGLQEQFPAYAANFPVWADQANAMVQYAVWTTLAAVGVGANLQHYNPLPDAAIA
                     KAWNIPENWLLRAQMVIGGIEGAAGEKTFEPVAERLKVFGA"
     gene            3729..5840
                     /locus_tag="WHR07_001395"
     CDS             3729..5840
                     /locus_tag="WHR07_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ2130603.1"
                     /translation="MKISFHLALLPTLIIASFPVAAADTQDNGEHYTATLPTVSVVGQ
                     SDTSVLKGYINYDEAAVTRNGQLIKETPQTIDTLNIQKNKNYGTNDLSSILEGNAGID
                     AAYDMRGESIFLRGFQADASDIYRDGVRESGQVRRSTANIERVEILKGPSSVLYGRTN
                     GGGVINMVSKYANFKQSRNIGAVYGSWANRSLNMDINEVLNKNVAIRLTGEVGRANSF
                     RSGIDSKNVMVSPSITVKLDNGLKWTGQYTYDNVERTPDRSPTKSVYDRFGLPYRMGF
                     AHRNDFVKDKLQVWRSDLEYAFNDKWRAQWQLAHRTAAQDFDHFYAGSENGNLIKRNY
                     AWQQTDNKTLSSNFTLNGDYTIGRFENHLTVGMDYSREHRNPTLGYSRAFTASIDPYD
                     RASWPASGRLQPILTQNRHKADSYGIFVQNIFSATPDLKFVLGGRYDKYTFNSENKLT
                     GSSRQYSGHSFSPNIGAVWNINPVHTLYASYNKGFAPYGGRGGYLSINTSSSAVFNAD
                     PEYTRQYETGVKSSWLDDRLSTTLSAYQIERFNIRYRPDEQNDPYTWAVGGKHRSRGV
                     ELSAIGQIIPKKLYLRGSLGVMQAKVVEDKENPDRVGIHLNNTSNVTGNLFFRYTPTE
                     NLYGEIGVTGTGKRYGYNSRNKEVTTLPGFARVDAMLGWNHKNVNITFAAANLLNQKY
                     WRSDAMPGAPRTYTARVNYSF"
     gene            6044..6703
                     /locus_tag="WHR07_001396"
     CDS             6044..6703
                     /locus_tag="WHR07_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEZ2130604.1"
                     /translation="MKTAILIDGAFFIKRVRSLGLSQNPHDAKRIADLAFRYSMLHLK
                     DKINGTDQMDDLYRIFFYDCVPFEKKMHNPVSHRAIDFSKTPEAIFRCNLHTELKKKR
                     KLALRLGKLSDNTAWILKPQVMKNLLKNPSTQITENDVVLDVKQKGVDMRIGLDISSI
                     TLKKQADKIILFSGDSDFVPAAKLARREGIDFILDPMWNHVPPDLMEHIDGLKTKCPK
                     P"
     gene            6874..7569
                     /locus_tag="WHR07_001397"
     CDS             6874..7569
                     /locus_tag="WHR07_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEZ2130605.1"
                     /translation="MKLKTLALTSLTLLALAACSKQAETSVPADSAQSSSSAPAAPAE
                     LNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCAHLEPVLSEHIKTFKDDTYMRRE
                     HVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
                     DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQ
                     LVDKVREEQKKPQ"
BASE COUNT         1892 a         1950 c         2059 g         1787 t
ORIGIN      
        1 ttgtccttct tcatcgactt ctatttttgc cgacgatggg aacggtggcg gcttgggtgg
       61 cggtgatttg ggcatacctg atgattgaaa gtgaaaaaaa cggaagatat tgagtcattc
      121 ggacgcaatg ccgtctgaaa cggaagttca gacggcattt gttttaggtt gccgtaccgc
      181 ttagggaata ccggcgacag gataggcggg atagccgtgg gtatcgaccg aacaggcaaa
      241 ccgccaaggc gtgtggacgg tgtcggcgga caggtgggcg agttcgggaa tgtgccgtct
      301 gacaaaggtg ccgtcggggt cggtcttgtg tgcggcggcg gcaatgtcgg ggcaggtgtg
      361 ccgtgaggcg gcaagccgcc agttgccttg gttgattgct gcatcgaaat cggtcagctg
      421 tcgggcaaac catatctcgc cttcgcggcg ggggaggttt aaaacgtggc agaaaaaatc
      481 cgcgctcaag cgtctcaggg cggggtggag gctgccggtt ttgtgcaaac agcgcatcgc
      541 ggcatcgata atcggaatgc cggtctggcc ctgctgccaa agcgtcaggc gcagggtgtg
      601 ttcaggattg ccgtctgaag ggtcgtcatc cgtgtgctgc aaggcaagtt gaaggaaaaa
      661 atcgcggcgg atgatgttgt ccgcccacgc gttcagacgg cgttcgaggc tttcccgcgc
      721 gagcaggcgc ggcgagatgc agccggcact caaatacgcg cccatcagcg aagtgtgttt
      781 gcgcgagggg aaatccttta aaacggagta ggaatccgcc tgttcgagaa accgccgcca
      841 ctgccgccaa gccgccgttt cgccgctgtt ttgcggcagg aagatgccgt ctgaaagggc
      901 ggcaggcggc ggggcggaaa ggttttcggg gaagggttgg cggtatgccg cgaataggtc
      961 cggaccggcg gggggctgct tggaaaagcg gtcgagccat acttcgcggt agcggtcgaa
     1021 atcggtgtgt gccgtgccgc cgtcgggtat caggtcggtt ttgccgaaaa cggcacggtc
     1081 gttgacgaag gttaacgcga tgccgtgttt gtccaattca tgccaaaggg cgttgtcggc
     1141 gagtttgtcg gcaaaagtat gggattcgtc ggcgatgacg gcgcggatat tgaggcggac
     1201 ggcgagccgg acgagctcgg caggcgatgc cgccgtgtag agcgggatgc cgcgccctgc
     1261 aagcccttgg gcgagttcgg cggcggattg gcggtagaac gcggcgcggc gagggttgtc
     1321 tgtttcggca tcgtcaatcc aaataccgat aacgggcaaa ccttcggcaa cggcggcgca
     1381 taaggcggcg ttgtcgcgga tgcggaggtt ttggcggaac cagacgagcg tgtgtgcggc
     1441 gcacgtgtcc gcataaaggg ggcgggcggt ttcagacggc atttcggtag cctttcctgc
     1501 tggcgatttt ttcgttcaga aaatcgatga agctgcggac tttcgcgctt aagaacgccc
     1561 tgtccgcata aacggcattc aggcggtcgg tcgggacggt atattcgggc agcagcctca
     1621 ccagcgagcc gcagcgcaaa tcgtgttccg ccgcccaaag cggctgataa ccgatgcacg
     1681 cgcccgcctt aatcatttcg cgcatcatca gcgtgttgtc ggtacggatg acgggggtca
     1741 gttcaagccg gtattttttg ccgtccgatt tgcgggtgag gtcgagtttc tgctggttgg
     1801 tgtaggtcgg caggacggcg ggcagccccg ccacttcttc cggcgtttcc ggcacgccgt
     1861 tgcgcctcag gaaatcgggc gaggcgagca gggcaaattc gatttccgcc agtgggcgcg
     1921 caatcagcga cggggacagg gtttgggaaa cgcgcaacgc caaatccacg ccttcggcaa
     1981 tcaaatcgac gtggcggttg tccaaaatca gttctaatgt cacttcggga taacgttcgc
     2041 ggtattccgc cagccagttg catatctggc tgccggcaaa ccacagtggc atcgttacgc
     2101 gcagcagccc ctgcggtttt tccgtccccc cggcggcttt ttgcgcggca tcgtcgagcg
     2161 tgtcgagcgc gtaactgcat tgccggtagt attcttcccc ggcttcggtc aggctgaggt
     2221 tgcggctgtt gcggtgcagg agtttggctt ggacggtgtt ttccaagtgg ctgacgtgtt
     2281 tgcttgccat tgcggtggag atgccgagcg cgccggcggc gcgggtgaag ccgccgcttt
     2341 ggacgacttg gcggaaaacc ttgaggctga acagggtgtc catattttct tgtgtggaaa
     2401 agttgtatca ataaaagcag tatatatttg aaaaggggaa acatctatac tctaccgcct
     2461 gaaatgaaga caaatatcaa aggagctttt atgtccgatt gctgcaaccg tatccaaccg
     2521 gttttgcttt ctgttttgcg tatcgtaacc gcttacctgt ttttgttgca cggtacgtcg
     2581 aaaatcttcg ccttccccat tgaaatgggc agcggttcgc ccggcgggct gttgctgctt
     2641 gccggtattt tagaaattgt cggcggcatt ttgctggtgt tgggcctgtt tgcgcgccct
     2701 gccgcgtttg ttttgtccgg ccagatggcg gttgcctatt ttatggcgca cgcttccgga
     2761 aatgctttgt tcccgattgc caacggcggc gagtccgcag tgctgttctg cttcgtattc
     2821 ctctatatcg cggcggcggg cggcggagca tggtcgctgg acaggctgtt tttcaagcgt
     2881 aaagcctgaa tcagactgcc taaagtgtat tttgttgaat gtttttgagg aaaagaaatg
     2941 acccgtcaat ctctgcaaca ggctgccgaa agccgccgtt ccatttattc gttaaataaa
     3001 aatctgcccg tcggcaaaga tgaaatcgtc caaatcgtcg aacacgccgt tttgcacaca
     3061 ccttcttcgt tcaattccca atctgcccgt gtggtcgtgc tgtttggcga agagcatgat
     3121 aaggtgtggc aatttgtcga agacgcgctg tgtgccgtcg tgcctgccga cagttttgaa
     3181 ccgaccgcgc aaaaattgaa cctgtttaag gcgggtgcgg caactatttt gttttatgaa
     3241 gatcaaaatg tcgtcaaagg tttgcaggag cagttccctg cttatgccgc caactttccc
     3301 gtttgggcgg accaggcgaa cgcgatggtg cagtatgccg tttggacgac acttgccgcg
     3361 gtcggcgtag gtgcaaacct gcaacattac aatcccttgc ccgatgcggc gattgccaaa
     3421 gcgtggaata tccccgaaaa ctggttgttg cgcgcacaaa tggttatcgg cggtattgaa
     3481 ggggcggcag gtgaaaagac ctttgaacca gttgcagaac gtttgaaagt gttcggcgca
     3541 taatttcgcg gtcaaaaaaa tgccgtctga accctgttca gacggcattt ttcagtatca
     3601 ggcggcgagt tttccgcatt ctgagacctt tgtttacaaa tatcatgttc aatatagtta
     3661 aaagaaatta ttctcatttc ctccgtgagg caatataatt cggttgtttt gttaaattga
     3721 gtataaaaat gaaaatatca tttcatttag ctttattacc cacgctgatt attgcttcct
     3781 tccctgttgc tgccgccgat acgcaggaca atggtgaaca ttacaccgcc actctgccca
     3841 ccgtttccgt ggtcggacag tccgacacca gcgtactcaa aggctacatc aactacgacg
     3901 aagccgccgt tacccgcaac ggacagctca tcaaagaaac gccgcaaacc atcgatacgc
     3961 tcaatatcca gaaaaacaaa aattacggta cgaacgattt gagttccatc ctcgaaggca
     4021 atgccggcat cgacgctgcc tacgatatgc gcggcgaaag cattttcctg cgcggttttc
     4081 aagccgacgc atccgatatt taccgcgacg gcgtgcgcga aagcggacaa gtgcgccgca
     4141 gtactgccaa catcgagcgc gtggaaatcc tgaaaggccc gtcttccgtg ctttacggcc
     4201 gcaccaacgg cggcggcgtc atcaacatgg tcagcaaata cgccaacttc aaacaaagcc
     4261 gcaacatcgg tgcggtttac ggttcgtggg caaaccgcag cctgaatatg gacattaacg
     4321 aagtgttgaa caaaaacgtc gccatccgtc tcaccggcga agtcgggcgc gccaattcgt
     4381 tccgcagcgg catagacagc aaaaatgtca tggtttcgcc cagcattacc gtcaaactcg
     4441 acaacggctt gaagtggacg gggcaataca cctacgacaa tgtggagcgc acgcccgacc
     4501 gcagtccgac caagtccgtg tacgaccgct tcggactgcc ttaccgcatg gggttcgccc
     4561 accggaacga ttttgtcaaa gacaagctgc aagtttggcg ctccgacctt gaatacgcct
     4621 tcaacgacaa atggcgtgcc caatggcagc tcgcccaccg cacggcggcg caggattttg
     4681 atcatttcta tgcaggcagc gaaaatggca acttaatcaa acgtaactac gcctggcagc
     4741 agaccgacaa caaaaccctg tcgtccaatt tcacgctaaa cggcgactac accatcggcc
     4801 gttttgaaaa ccacttgacc gtaggcatgg attacagccg cgaacaccgc aacccgacct
     4861 taggttacag ccgcgccttt actgcttcca tcgatccata cgaccgagca agctggccgg
     4921 cttcgggcag attgcagcct atcctcaccc aaaaccgcca caaagccgac tcctacggca
     4981 tctttgtgca aaacatcttc tccgccacgc ccgatttgaa attcgtcctc ggcggtcgtt
     5041 acgacaaata cacctttaat tccgaaaaca aactcaccgg cagcagccgc caatacagcg
     5101 gacactcgtt cagccccaac atcggcgcag tgtggaacat caatcccgtc cacacacttt
     5161 acgcctcgta taataaaggc ttcgcgcctt atggcggacg cggcggctat ttgagcatca
     5221 acacgtcgtc ttccgccgtg ttcaacgccg accccgagta cacccgccaa tacgaaaccg
     5281 gtgtgaaaag cagttggctg gacgaccgcc tcagcactac gttgtctgcc taccaaatcg
     5341 aacgcttcaa tatccgctac cgccccgacg agcaaaatga tccctacact tgggcagtcg
     5401 gcggcaaaca ccgttcgcgc ggcgtggaat tgtccgccat cgggcaaatc atccccaaaa
     5461 aactctatct gcgcggttcg ttgggcgtga tgcaggcgaa agtcgttgaa gacaaagaaa
     5521 atcccgaccg agtgggcatc catttgaata acaccagcaa cgttaccggc aacctgtttt
     5581 tccgttatac cccgaccgaa aacctctacg gcgaaatcgg cgtaaccggt acaggcaaac
     5641 gctacggtta caactcaaga aataaagaag tgactacgct tccaggcttt gcccgagttg
     5701 atgccatgct tggctggaac cataaaaatg ttaacattac ctttgccgca gccaatctgc
     5761 tcaatcaaaa atattggcgt tcggatgcca tgcccggcgc gccgcgcact tatacggcgc
     5821 gggttaatta cagtttctaa tcccgttcgt gcaacagaat gccgtctgaa aatcctgata
     5881 atccgtaaat tcagcacacg aactttttga caggctttat ctacatcagt ataatccaaa
     5941 aaagaaatag cgcccttggc agtacgcatt acccattaaa tcatagcggg tatgccgatc
     6001 ccaagggctt ttttatatct ttgacaaata taggggaagc aatatgaaaa ccgccatttt
     6061 gattgacggt gcatttttta ttaagcgggt acggtcatta ggcctgtctc aaaatccaca
     6121 cgatgcaaaa agaattgctg atttggcttt ccgatattcg atgctgcatc tgaaagataa
     6181 aatcaacggc acagatcaaa tggatgattt atatagaatt ttcttttacg actgcgtgcc
     6241 gtttgaaaag aaaatgcaca atcccgtatc tcatcgtgcc atagattttt caaagactcc
     6301 ggaagccata tttcgttgca atctgcatac cgaattgaag aagaagcgta aattagcgtt
     6361 acgtttaggc aagctgtcgg acaatacagc atggatatta aaaccccaag tcatgaaaaa
     6421 tcttctgaaa aacccgtcaa ctcaaattac ggaaaacgat gtcgtgctcg atgttaaaca
     6481 aaaaggtgta gatatgcgta taggcttgga tatttcatct attaccttaa aaaaacaagc
     6541 cgataaaatc atcttgtttt ctggtgattc cgattttgtc ccagcagcca aattagccag
     6601 acgggaaggt atcgatttta ttcttgatcc tatgtggaat catgtcccac ctgacttaat
     6661 ggaacacatc gacggattga agacaaaatg tccgaaaccg taaattacta gaacaaaggc
     6721 cgtctgaaaa taaggctaat tatctaagcc atatttcaga cggcctttat aaaggctgaa
     6781 ataaaactaa acacattttt tcactcaaat cgaacacgcc ttcaataaaa tgccataaaa
     6841 tccgcacatt aatctgacac acaagagata cctatgaaac tgaaaacctt agctttgact
     6901 tcattgaccc tgttggcatt ggccgcttgt agcaaacagg ctgaaaccag tgttccggca
     6961 gacagcgccc aaagcagctc atctgctccg gcagcccctg ctgagttgaa cgaaggtgtg
     7021 aactacactg tattgtctac gcctattccg caacagcagg ccggtaaaat cgaagtattg
     7081 gaatttttcg gctacttctg cccgcattgc gcccatcttg agccggtctt gagcgagcac
     7141 atcaaaacgt ttaaagacga tacctatatg cgccgggagc atgtcgtgtg gggtgatgaa
     7201 atgaaacctt tggcacgttt ggcggccgca gtggaaatgg ccggtgaatc agataaagcc
     7261 aacagccata ttttcgatgc gatggttaat caaaaaatca atctggccga taccgatacc
     7321 ctgaaaaaat ggctgtccga gcaaacagcg tttgacggca aaaaagtatt ggctgcattt
     7381 gaggctcctg aaagccaagc gcgtgcggct caaatggaag agttgaccaa taaattccaa
     7441 atcagcggca caccgactgt gattgtcggc ggcaaatacc aagttgaatt taaagactgg
     7501 cagtctggta tgaccacgat tgaccagttg gtggataaag tacgcgaaga gcagaaaaag
     7561 ccgcaataag ttgaggattg aatgagtaaa ggccatctga aaataggatt tcagacggcc
     7621 ttttgtattt aggctttata gaagagatga ttgcttaaag ccttatggtt ttaaatcaga
     7681 atatatag
//
LOCUS       DAWGKF010000095         7670 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.095, whole genome shotgun sequence.
ACCESSION   DAWGKF010000095 DAWGKF010000000
VERSION     DAWGKF010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7670)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7670)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7670
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.095"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(308..730)
                     /locus_tag="WHR07_001398"
     CDS             complement(308..730)
                     /locus_tag="WHR07_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEZ2130606.1"
                     /translation="MQVTSKWIDGMCFVGTTESGHSVVMEGSAAEGAAKRGPSPLEML
                     LLGVAGCSSIDVVMIAEKQRQKVTDCRATVTAKRADDAPRVFTEIHIHFKVFGHDLKE
                     SAIERAVQMSAEKYCSASIMLGKAAKITHSFEIAGADK"
     gene            complement(848..1519)
                     /locus_tag="WHR07_001399"
     CDS             complement(848..1519)
                     /locus_tag="WHR07_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HEZ2130607.1"
                     /translation="MMKTFKNIFSAAILSAALPCAYAAGLPQSAVLHYSGSYGIPATM
                     TFERSGNAYKIVSTIKVPLYNIRFESGGTVVGNTLHPTYYRDIRRGKLYAEAKFADGS
                     VTYGKAGESKTEQSPKAMDLFTLAWQLAANDAKLPPGLKITNGKKLYSVGGLNKAGTG
                     KYSIGGVETEVVKYRVRRGDDTVMYFFAPSLNNIPAQIGYTDDGKTYTLKLKSVQING
                     QSAKP"
     gene            complement(1535..2161)
                     /locus_tag="WHR07_001400"
     CDS             complement(1535..2161)
                     /locus_tag="WHR07_001400"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEZ2130608.1"
                     /translation="MKNIVILISGRGSNMQAIVNAAIPNVRIAAVLSNSETAAGLQWA
                     AERGIPTDSLHHKNFESRLAFDTAMMEKIDAYQPDLVVLAGFMRILTPEFCAHYEGRL
                     MNIHPSILPSFTGLHTHERALEAGCRVAGCTIHFVTAELDCGPIVSQGVVPILDGDTA
                     DDVAARVLAVEHKLYPKAVADFAAGRLIIEGNRVRNSENADAARFLTA"
     gene            complement(2268..3074)
                     /locus_tag="WHR07_001401"
     CDS             complement(2268..3074)
                     /locus_tag="WHR07_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ2130609.1"
                     /translation="MNTIFKISALTLSAALALSACGKKEAASEPAAASAAQGDTSSIG
                     STMQQASYAMGVDIGRSLKQMKEQGAEIDLKVFTEAMQAVYDGKEIKMTEEQAQEVMM
                     KFLQEQQAKAVEKHKADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGEGKQP
                     SKDDIVTVEYEGRLIDGTVFDSSKANGGPVTFPLSQVIPGWTEGVQLLKEGGEATFYI
                     PSNLAYREQGAGDKIGPNATLVFDVKLVKIGAPENAPAKQPAQVDIKKVN"
     gene            complement(3333..3773)
                     /locus_tag="WHR07_001402"
     CDS             complement(3333..3773)
                     /locus_tag="WHR07_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HEZ2130610.1"
                     /translation="MPKATFYTHVAQVPIFTCRLIARAIRDGGRILVWSDSFGRLQEL
                     DKMLWQYEAESFIPHEIWEMEEAMPSETSVLLACGGNPPRIPEGMTVLNLSDGFWNTA
                     PVLPARVLEIVGNSLEDLADARERFTAYRRSGFAIEHHGMEGKA"
     gene            complement(3836..5242)
                     /locus_tag="WHR07_001403"
     CDS             complement(3836..5242)
                     /locus_tag="WHR07_001403"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HEZ2130611.1"
                     /translation="MEFSTKTEILQEQQAGAQLFVCTEEAQLNHPTALALLSSLEEGQ
                     NFADTKIPTGNGLQAVAVCCLKSTGRAALNKAAAEAAKWAQNQETVNVDIHAFDEAQA
                     AAVAEAFAIAFGNAAYRFDRYKKEAKPAKFETAVFHSAHEAVVKEALRVAEAQVYGQS
                     LCRDLGNAAPNECTPEFLARTAKAEAEKLGAHAKIIEKDYIKENMGSFWSVAKGSVED
                     PYLVELSYFGAADKEAAPVVLVGKGITFDTGGISLKPGLNMDEMKFDMCGAATVISTF
                     CAAVKLQLPINLIAVVATCENMPSGAANKPGDVVKSMKGLTIEVLNTDAEGRLILCDA
                     LTYAEQFKPKAVIDVATLTGACIVALGHDVSGVMGNNQDLVDSLLAASYNVDDKAWQL
                     PLFETYKDQLKSNFADIPNIGTPGAGTITAATFLSYFTEGYPWAHLDIAGTAWKSGAE
                     KGATGRPVPLLLNYLRNL"
     gene            5412..6527
                     /gene="lptF"
                     /locus_tag="WHR07_001404"
     CDS             5412..6527
                     /gene="lptF"
                     /locus_tag="WHR07_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HEZ2130612.1"
                     /translation="MIYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVA
                     IDAVLALVGFWVIGMTPLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPV
                     MQFAVPFAVLVAVMQLWVIPWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVY
                     FVETFDTESGIMKNLFLREQDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPG
                     RADYNQVSFQKLNLIISTTPKLIDPVSHRRTIPTAQLIGSSNPQHQAELMWRISLTVS
                     VLLLCLLAVPLSYFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLP
                     MHIIMFVIAIVLLRVRSMPSQPFWQAVGKSLTLKGGK"
     gene            6524..7594
                     /gene="lptG"
                     /locus_tag="WHR07_001405"
     CDS             6524..7594
                     /gene="lptG"
                     /locus_tag="WHR07_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HEZ2130613.1"
                     /translation="MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSY
                     GIWEMLGYTALKMPARAYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLI
                     LSQFGFIFAIATVALGEWVAPTLSQKAENIKAAAINGKISTGNTGIWLKEKNSIINVR
                     EMLPDHTLLGIKIWARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSI
                     AAEENWPISVKRNLMDVLLVKPDQMSVGELTTYIRHLQNNSQNTRIYAIAWWRKLVYP
                     AAAWVMALVAFAFTPQTTRHGNMGLKLFGGICLGLLFHLTGRFFGFTSQLYGIPPFLA
                     GALPTIAFALLAVWLIRKQEKR"
BASE COUNT         1663 a         2097 c         2021 g         1889 t
ORIGIN      
        1 aataaattaa tatatggctt aaaataacgg gatgcccgcc ttccgcccgc ccgcagaagc
       61 aggcgggtat cattttaaaa cgcggcattt aaaatttgac cgaaaattgt tgacaatccg
      121 gaatcaagtc tgcacaatac cccgacaagt ccaagtatta taaaggctga ataaagagga
      181 aacagcaggc agatatattc gggaggtgca gtccgaatat atctgctttt ttatgcgcct
      241 ccggattgcc tgccgcacct ttcccttcag acggcatcag ccgtttcccc ataatgccgc
      301 ccgatgccta tttatctgcc ccggcaattt caaaactgtg ggtaatcttt gccgctttgc
      361 ccaacataat cgaagccgaa cagtattttt cggcagacat ctgaacggcg cgctcaatgg
      421 ccgattcttt caaatcatgc ccgaatactt tgaaatggat gtggatttcg gtaaacacgc
      481 gcggcgcatc gtccgcccgt ttcgccgtaa ccgtcgcacg gcagtcagtc actttctgac
      541 gctgtttttc ggcaatcatc accacatcga tgctcgaaca gcccgccacg cccaacagca
      601 gcatttccaa agggctgggc ccgcgcttgg ccgcaccttc tgccgccgaa ccctccataa
      661 cgacgctgtg cccgctttcc gtcgtgccga caaagcacat tccgtctatc cattttgatg
      721 taacctgcat ggtgtcattc ctgaaaatag cgttaaaacc gctttgcata tggcgttatt
      781 gtaaacaatt tcaagcggct tatgcagaaa tatggacaaa acggcaaaaa aacgcctgaa
      841 aaccgattta cggtttggcg gactggccat tgatctgcac cgatttgagt ttcagcgtat
      901 aggttttgcc gtcgtcggta tagccgattt gtgccggaat attgttcagg gacggtgcga
      961 agaaatacat taccgtatcg tcgccgcgcc gcacccgata tttgacgact tcggtttcca
     1021 cgccgcctat gctgtatttt cctgtacccg ccttattcaa accgccgacg gaataaagtt
     1081 ttttgccgtt ggtgattttc agccccgggg ggagtttcgc gtcatttgcc gccaactgcc
     1141 aggcaagcgt gaacagatcc atagccttgg ggctttgctc ggttttgctc tcgcccgctt
     1201 tgccgtaggt tacgctgccg tcggcgaatt tggcttccgc atacagtttg cccctgcgta
     1261 tgtctctata gtaggtaggg tgcagggtat tgccgacaac cgtaccgccg gactcgaaac
     1321 ggatattgta tagcggcact ttaatcgtcg aaacgatttt gtaagcattg ccgctgcgtt
     1381 caaatgtcat cgtggcggga atgccgtagc tgccggaata gtgcagcacg gcggattggg
     1441 gcagccctgc cgcatacgcg cacggcaggg cggcggacaa aatggcggcg gaaaatatat
     1501 ttttaaaagt cttcatcatt tgctcccgcc cggtttacgc cgtcagaaaa cgggcggcat
     1561 cggcgttttc cgaatttctg acgcggtttc cctcgataat caggcggccg gcggcaaaat
     1621 cggcaacggc tttcggatag agtttatgct cgacagccaa aacccgggcg gcaacatcgt
     1681 ctgccgtatc gccgtcgagt atcggcacaa ccccttgcga tacaatcggg ccgcaatcca
     1741 gttcggcagt aacgaaatgg atggtgcagc cggcaacgcg acaacctgcc tccaaagcgc
     1801 gttcgtgcgt atgaagtccg gtaaacgagg gaaggatgga cgggtgaatg ttcatcagcc
     1861 tgccttcgta atgggcacag aactcagggg tcagaatccg cataaaacct gccaaaacca
     1921 ccaagtcggg ttgatatgcg tcgatttttt ccatcatggc ggtatcgaag gcaagtcgtg
     1981 attcaaagtt tttatgatgc aggctgtcgg tcgggatgcc gcgttcggcc gcccattgca
     2041 aaccggcagc cgtttcgctg ttgctcaaca cggcggcaat gcggacgttg ggaatggcgg
     2101 cattgacgat tgcctgcata ttgctgccgc gtccggaaat caggatgacg atgtttttca
     2161 taatggtacg cttttgaaag ggatgccgtc tgaaccgctg tttggtggtt tcagacggca
     2221 tttgccgtaa aaatgcccga aaacctgttt cgggcatgga ttcggactta atttactttt
     2281 ttgatgtcga cttgagccgg ctgcttggcg ggcgcgtttt cgggtgcgcc gattttgacc
     2341 agtttcacat caaataccaa agtggcgttc gggccgattt tgtcgcccgc accctgttcg
     2401 cggtaggcaa ggttggacgg gatgtagaac gtggcttcgc cgccttcttt cagaagctgt
     2461 acgccttcgg tccaacccgg aatcacttgg ctcaaaggga aggtgaccgg gccgccgttg
     2521 gctttgctgc tgtcgaatac cgtaccgtca atcaggcggc cttcgtattc cacggtaacg
     2581 atgtcgtctt tggacggctg tttgccttca ccctgtttgg tgattttgta ttgcaggccg
     2641 gaagcagtgg tcttcacgcc gtctttggcg gcattttctt tcagaaaggc ttcgcctttt
     2701 tctttattgg ccttcgcgtc cgccttgtgt ttttctacgg ctttagcctg ttgttcctga
     2761 aggaatttca tcatgacttc ctgagcctgc tcttcagtca ttttgatttc tttgccgtca
     2821 tacactgcct gcatggcttc ggtaaagact ttcaaatcga tttccgcacc ctgttccttc
     2881 atttgcttca gggagcgtcc gatgtccacg cccatcgcat agcttgcctg ctgcatcgtg
     2941 ctgccgatcg aagaggtgtc gccctgcgcg gcagaagcgg cggcaggttc ggatgcggct
     3001 tcttttttgc cacaggcgga aagtgccaaa gcggcggaaa gggtcagtgc gctgattttg
     3061 aaaatggtgt tcatgatgga tcttcgctgt cgataaggtc ggaaaaacgg gattatagcc
     3121 gagtttgaat gtttcaacac acaggatgac acataaagcg tcaatcgtgt gttgccctgt
     3181 tttggaaggg attgaacctt ccaaaataag ttttgattct accgccccga gggacagatg
     3241 tccaagtggc ggggttcaac cgataaggaa attttaatca aatagaatca agcctgttta
     3301 aattttgtaa atgcggcatt tcagacggca ttttatgcct tgccctccat gccgtgatgt
     3361 tcgatggcaa aaccgcttcg gcggtaggcg gtaaagcgtt cgcgcgcgtc ggcgagatct
     3421 tccaagctgt tgccgacgat ttccaaaacg cgcgcgggca agaccggagc ggtgttccaa
     3481 aaaccgtcgg acaggttcaa aacagtcatg ccttcgggaa ttcggggcgg attgccgccg
     3541 caagcaagca ggacggatgt ttcagacggc atggcttctt ccatttccca aatttcgtgc
     3601 ggaatgaaac tctcggcttc gtattgccaa agcattttgt ccaattcctg aagccgcccg
     3661 aacgaatcgg accacaccag tatcctgccg ccgtcccgaa tcgcacgggc aatcaggcgg
     3721 caggtgaaaa tcggaacttg ggcaacgtgc gtgtaaaagg tggctttcgg catattgttt
     3781 gagcatttgg caggacgatg ccgtctgaaa ggcttcagac ggcattgtgg caaaattaaa
     3841 gattccgcag atagttcagc agcaagggaa cgggacggcc agtcgcacct ttttccgctc
     3901 cggatttcca cgccgtaccc gcgatgtcaa ggtgcgccca cgggtagcct tcggtgaagt
     3961 aagacaggaa tgttgcggcg gtaatcgtgc ccgcgccggg cgtgccgata ttggggatgt
     4021 cggcaaagtt ggatttgagc tggtctttgt aggtttcaaa gagcggcagt tgccacgctt
     4081 tgtcgtccac gttgtaggaa gcggcaagca ggctgtcgac caaatcttga ttgttgccca
     4141 tcacgccgct gacatcgtgc cccaaggcga caatacacgc gccggtcagg gtggcgacgt
     4201 cgatgacggc tttgggtttg aactgttcgg cgtaagtgag cgcgtcgcac aaaatcagac
     4261 ggccttcggc atcggtgttc aacacttcga tggtcagacc tttcatactt ttcacgacat
     4321 cgcccggttt gtttgccgcg ccggaaggca tattttcaca agtggcgacg acggcaatca
     4381 ggttaatcgg cagttgcagt ttgacggcgg cgcagaaggt gctgatgacg gttgccgcgc
     4441 cgcacatatc aaacttcatt tcgtccatgt tcaggccggg tttgagggaa atgccgccgg
     4501 tgtcgaaggt aatgcctttg ccgaccaata ccacaggcgc ggcttctttg tccgccgcac
     4561 cgaaatagct cagttcgacc aaatagggat cttcgacact gcctttggcg accgaccaaa
     4621 acgaacccat gttttctttg atgtagtctt tttcgatgat tttggcgtgc gcgcccagtt
     4681 tttcggcttc ggctttggcg gtgcgcgcta aaaattcggg cgtgcattcg ttgggcgcgg
     4741 cgttgcccaa gtcgcggcag aggctttgtc cgtaaacttg cgcttcggcg acgcgcaagg
     4801 cttctttaac gacggcttcg tgtgcgctgt ggaacacggc ggtttcaaat ttggcgggct
     4861 tggcttcttt tttgtagcgg tcgaaacggt aggcggcgtt gccgaacgca atcgcaaacg
     4921 cttcggctac ggcggcggct tgcgcttcat cgaaggcatg gatgtccaca ttgaccgttt
     4981 cctgattttg cgcccatttg gcggcttcgg cggcggcctt gttcaatgcg gcgcggccgg
     5041 tgcttttcag acagcatacg gcaacagcct gcaaaccgtt gcctgtcggg atttttgtgt
     5101 cggcaaaatt ttgaccttct tcaagcgaag acaaaagggc aagggcggtc ggatggttta
     5161 attgcgcctc ttcggtgcag acaaataact gtgcgcctgc ctgctgttcc tgcaagattt
     5221 cggtttttgt gctaaattcc acgtttattc tcctgattga gacggttgtc ggtagttttc
     5281 ggacggcctt tcgctcaaaa gaccgtctga agacggctgg cacgattgta ccccatttga
     5341 agcaccgtct gaaaccttgc gcggacaatc cgcctgcgcc gaaccgctta ccgccccctg
     5401 accgcgattc tatgatttat caaagaaacc tcatcaaaga actctctttt accgccgtcg
     5461 gcattttcgt cgtcctcttg gcggtattgg tctccacgca ggcaatcaac ctgctcggcc
     5521 gtgccgccga cgggcgtgtc gccatcgatg ccgtgttggc attggtcggc ttctgggtca
     5581 tcggtatgac gccgcttttg ctggtgttga ccgcatttat cagtacgttg accgtgttga
     5641 cccgctactg gcgcgacagc gaaatgtcgg tctggctatc ctgcggattg gcattgaaac
     5701 aatggatacg cccggtgatg cagtttgccg tgccgtttgc cgttttggtt gccgtcatgc
     5761 agctttgggt gataccgtgg gcagagctac gcagccgcga atacgctgaa atcctgaagc
     5821 agaagcagga attgtctttg gtggaggcag gcgagttcaa cagtttgggc aagcgcaacg
     5881 gcagggttta ttttgtcgaa accttcgata ccgaatccgg catcatgaaa aacctgttcc
     5941 tgcgcgaaca ggacaaaaac ggcggcgaca acatcatctt cgccaaagaa ggtaacttct
     6001 cgctgaacga caacaaacgc acgctcgaat tgcgccacgg ctaccgttac agcggcacgc
     6061 ccggacgcgc cgactacaat caggtttcct tccaaaaact caacctgatt atcagcacca
     6121 cgcccaaact catcgacccc gtttcccacc gccgtaccat tccgaccgcc caactgattg
     6181 gcagcagcaa cccgcaacat caggcggaat tgatgtggcg catctcgctg accgtcagcg
     6241 tcctcctact ctgcctgctt gccgtgccgc tttcctattt caacccgcgc agcggacata
     6301 cctacaatat cttgattgcc atcggtttgt ttttaattta ccaaaacggg ctgaccctgc
     6361 tttttgaagc cgtggaagac ggcaaaatcc atttttggct cggactgctg cctatgcaca
     6421 tcatcatgtt cgtcatcgca atcgtacttc tgcgcgtccg cagcatgccc agccagccct
     6481 tctggcaggc ggttggcaaa agtctgacat tgaaaggcgg aaaatgaacc tgatttcacg
     6541 ttacatcatc cgtcaaatgg cggttatggc ggtttacgcg ctccttgcct tcctcgcttt
     6601 gtacagcttt tttgaaatcc tgtacgaaac cggcaacctc ggcaaaggca gttacggcat
     6661 atgggaaatg ctgggctaca ccgccctcaa aatgcccgcc cgcgcctacg aactgatgcc
     6721 cctcgccgtc cttatcggcg gactggtctc tctcagccag cttgccgccg gcagcgaact
     6781 gaccgtcatc aaagccagcg gcatgagcac caaaaagctg ctgttgattc tgtcgcagtt
     6841 cggttttatt tttgctattg ccaccgtcgc gctcggcgaa tgggttgcgc ccacactgag
     6901 ccaaaaagcc gaaaacatca aagccgccgc cattaacggc aaaatcagca ccggcaatac
     6961 cggcatttgg ctcaaagaaa aaaacagcat tatcaatgtg cgcgaaatgt tgcccgacca
     7021 taccctgctg ggcattaaaa tctgggcccg caacgataaa aacgaactgg cagaggcagt
     7081 ggaagccgat tccgccgttt tgaacagcga cggcagttgg cagttgaaaa acatccgccg
     7141 cagcacgctt ggcgaagaca aagtcgaggt ctctattgcg gctgaagaaa actggccgat
     7201 ttccgtcaaa cgcaacctga tggacgtatt gctcgtcaaa cccgaccaaa tgtccgtcgg
     7261 cgaactgacc acctacatcc gccacctcca aaacaacagc caaaacaccc gaatctacgc
     7321 catcgcatgg tggcgcaaat tggtttaccc cgccgcagcc tgggtgatgg cgctcgtcgc
     7381 ctttgccttt accccgcaaa ccacccgcca cggcaatatg ggcttaaaac tcttcggcgg
     7441 catctgtctc ggattgctgt tccaccttac cggacggttc ttcgggttta ccagccaact
     7501 ctacggcatc ccgcccttcc tcgccggcgc actacctacc atagccttcg ccttgctcgc
     7561 tgtttggctg atacgcaaac aggaaaaacg ttgaaccaat gccgtctgcc ccccttcgga
     7621 cggcattggt ttttattatc atattcccgc agacagatag ccgttcccta
//
LOCUS       DAWGKF010000096         7650 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.096, whole genome shotgun sequence.
ACCESSION   DAWGKF010000096 DAWGKF010000000
VERSION     DAWGKF010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7650)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7650)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7650
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.096"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(127..1989)
                     /gene="hscA"
                     /locus_tag="WHR07_001406"
     CDS             complement(127..1989)
                     /gene="hscA"
                     /locus_tag="WHR07_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HEZ2130614.1"
                     /translation="MALLQISEPGMSASPHRHRLAAGIDLGTTNSLVATVRSGSAACL
                     PDAEGRVTLPSVVRYLENGGIEVGKTALSAQKTDPLNTVSSAKRLIGRTLADLHQNTH
                     YLPYRFGDNQRVIELHTRQGVKTPVEVSAEILKTLKSRAEETLGGDLVGVVITVPAYF
                     DDAQRQATKDAARLAGLNVLRLLNEPTAAAIAYGLDNASEGTFVVYDLGGGTFDVSVL
                     QLTKGLFEVKATGGNSALGGDDFDHRLFCRLLEQNGLSQLNEQDSQLLLSLVRAAKEQ
                     LTTQTEARIQATLSDGMAIDTSISRAEFHNLTQHLVMKTLEPVTQALKDAGVGKNEVK
                     GVIMVGGSTRMLHVQQAVATFFGQTPLNNLNPDEVVALGAAIQANVLAGNKTDGEWLL
                     LDVTPLSLGLETYGGLAEKIIPRNSTIPTARAQDFTTFKDGQTAMTIHVVQGERELVS
                     DCRSLAKFTLRGIPPMAAGAARIRVTFQIDADGLLSVSAQEQSTGVQAQIEVKPSYGL
                     DDGAITRMLKDSMDNAAEDMAVRARAEAVVEAESLTDAVNAALELDSDLLDAKELQQI
                     RQGIADLQGRLKDGKAEDIRSAVAKLSRSTDNFAAKRMNRNIQRALTGQSVDNI"
     gene            2160..3032
                     /gene="hpnD"
                     /locus_tag="WHR07_001407"
     CDS             2160..3032
                     /gene="hpnD"
                     /locus_tag="WHR07_001407"
                     /EC_number="2.5.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="presqualene diphosphate synthase HpnD"
                     /protein_id="HEZ2130615.1"
                     /translation="MKGLDYCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELD
                     DVVDECSNPDVAQATLNWWRGDLDKVFGGAMPEHPVNQALRQVKETFKLPKYELEALI
                     DGMQMDLVQARYGSFEELKLYCHCVAGVVGCLIARILGFSDDQTLEYADKMGLALQLT
                     NIIRDVGEDARRGRIYLPMEEMRRFDVPASVILQCSPTGNFAELMAFQIKRARETYRE
                     AVSLLPDADKKAQKVGLVMAAVYYALLNEIDRDGAQNVLKYKIALPSPRKKRIALKTW
                     LFGFKPRPGTPERA"
     gene            3429..4742
                     /locus_tag="WHR07_001408"
     CDS             3429..4742
                     /locus_tag="WHR07_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEZ2130616.1"
                     /translation="MMNTPHPRPKIAVIGAGWAGLSAAVTLARHADVTLFEAGRQAGG
                     RARALAGNTDGFGFLDNGQHILLGAYRGVLRLMKTIGSDPRAAFLRVPLHWHMHGGLQ
                     FRTLPLPAPLHILGGVLLARRVPSAFKAKLLADMSDLQKSARLGQPDTTVAQWLKQRN
                     VPCAAVMQFWQPLVWGALNTPLETASLRVLCNVLSDGVLTKKSGSDYLLPKQDLGAIV
                     AEPALAELQRLGADIRLETRVCRLNTLPDGKVLVNGEAFDAAVPATAPYHAAALLPEG
                     TPEHVQTAYQNLRYHAITTVYLRYAEPVRLPAPLTGLADGTVQWLLCRGRLGLPENEV
                     SAVISVSDRVGAFANRAWADKAHADLKRILPHLGEPEAVRVITEKRATTAADAPPPDL
                     SWLHRHRIFPAGDYLHPDYPATLEAAVQSGFASAEACLQSLSDAV"
     gene            4825..5544
                     /locus_tag="WHR07_001409"
     CDS             4825..5544
                     /locus_tag="WHR07_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEZ2130617.1"
                     /translation="MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLE
                     KVYDAIVEAGYPEPFAICFDLISAEEKEFEHFAATIAEATQGKLDGIVHCAGYFYALS
                     PLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGF
                     GASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAKSERKSYGDVL
                     PAFVWWASTESKGRSGEIVYL"
     gene            5709..6380
                     /locus_tag="WHR07_001410"
     CDS             5709..6380
                     /locus_tag="WHR07_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HEZ2130618.1"
                     /translation="MKTVSTAVVLAAAAVSLTGCATESSRSLEVEKVASYNTQYHGVR
                     TPISVGTFDNRSSFQKGIFSDGEDRLGSQAKTILVTHLQQTNRFNVLNRTNLNALKQE
                     SGISGKAHNLKGADYVVTGDVTEFGRRDVGDHQLFGILGRGKSQIAYAKVALNIVNVN
                     TSEIVYSAQGAGEYALSNREIIGFGGTSGYDATLNGKVLDLAIREAVNSLVQAVDNGA
                     WQPNR"
     gene            6390..6758
                     /locus_tag="WHR07_001411"
     CDS             6390..6758
                     /locus_tag="WHR07_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4810 domain-containing protein"
                     /protein_id="HEZ2130619.1"
                     /translation="MNPKTLSRLSLCAAVLALTACGGNGQKSLYYYGGYPDTVYEGLK
                     NDDTSLGKQTEKMEKYFVEAGNKKMNAAPGAHAHLGLLLSRSGDKEGAFRQFEEEKRL
                     FPESGVFMDFLMKTGKGGKR"
     gene            6755..7402
                     /locus_tag="WHR07_001412"
     CDS             6755..7402
                     /locus_tag="WHR07_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF799 domain-containing protein"
                     /protein_id="HEZ2130620.1"
                     /translation="MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPL
                     NESPDVNGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKLHQ
                     IFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSASIREGSNNSN
                     SGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSHNGILKGPRFVEEQPK"
BASE COUNT         1707 a         2196 c         2117 g         1630 t
ORIGIN      
        1 acgcccttga tgacggtttt catcgaatag acaatgcctg acttttccat atcgatgttt
       61 ttcaagtgtt ttcgagcctt cagacggcat caggttatat ctatgccgtc tgaaaccgtt
      121 taagtatcaa atattatcga cactctggcc tgtcaatgcg cgttggatat tgcggttcat
      181 gcgtttggcg gcgaagttgt cggtgctgcg gctgagtttg gcgacggcgg agcggatgtc
      241 ttcggctttt ccgtctttca gacggccttg caaatcggcg atgccttgcc ggatctgttg
      301 caattctttg gcatccagta aatcgctgtc caactcgagg gcggcgttga cggcatcggt
      361 caggctttcg gcttcgacta cggcttcggc gcgggcgcgt accgccatat cttcggcggc
      421 gttgtccata ctgtctttaa gcattcgggt aatcgcgccg tcgtccaagc cgtaggaagg
      481 tttgacttcg atttgcgcct gtacgccggt gctttgttct tgggcggaaa cggacagcag
      541 cccgtccgca tcgatttgga aggttacgcg gatacgcgcc gcacccgccg ccatcggtgg
      601 aatgccgcgc agggtgaatt tggcaaggct gcggcagtca gaaacgagct cgcgctcgcc
      661 ttgcacgacg tgtatcgtca tcgcggtttg accgtctttg aaggtggtaa agtcctgcgc
      721 gcgcgcggtg gggatggtgg aattgcgcgg gatgattttt tccgccaagc cgccgtaggt
      781 ttccaaaccg agcgacaaag gtgtaacgtc cagcagcagc cattcgccgt cggttttgtt
      841 gcctgcgagg acgtttgcct gtatggcggc gccgagcgcg acgacttcgt cgggattgag
      901 gttgttcagc ggggtttgtc cgaagaaggt ggcgactgcc tgttggacgt gcagcatacg
      961 ggtcgaaccg ccgaccataa tcacgccttt gacttcgttt ttaccgacac cggcatcttt
     1021 caacgcctgt gtgaccggtt cgagcgtttt catcaccaaa tgctgcgtca ggttgtggaa
     1081 ctcggcgcga ctgatgcttg tgtcgattgc catgccgtct gaaagcgtcg cctgaatgcg
     1141 cgcttcggtt tgcgtggtta attgttcttt ggcggcgcgg acgagcgaga gcaggagttg
     1201 gctgtcttgt tcgttgagtt gggagagtcc gttttgttcg agcaggcggc agaacaggcg
     1261 gtggtcgaaa tcgtcgccgc ccaacgcgct gttgccgccg gtggctttga cttcaaacag
     1321 tcctttggtc agttgcaata cggatacgtc gaatgtgccg ccccctaagt cgtacacgac
     1381 aaacgtgcct tccgaggcgt tgtccagccc gtaggcgatt gcggcagcgg tgggttcgtt
     1441 gagcaggcgc aatacgttca aacccgccag acgcgcggca tctttggtgg cttggcgttg
     1501 ggcatcatcg aaataggcag ggacggtaat caccacgccg accaaatcgc cgcccaaggt
     1561 ttcttcggcg cgcgatttaa gggttttgag gatttccgcc gacacttcga caggcgtttt
     1621 caccccctgc cgcgtatgca gttcgataac gcgttgattg tcgccgaaac ggtaaggcag
     1681 gtaatgcgta ttttgatgca gatcggcaag cgtccgcccg ataaggcgtt tggcggagct
     1741 gacggtgttc agcgggtcgg ttttttgggc ggacagggcg gttttgccga cttcaatgcc
     1801 gccgttttcc agatagcgga cgacggaagg cagggtaacg cgcccttcgg catcgggcag
     1861 acaggcggca ctgccgctgc ggacggtggc gaccaagctg ttggtcgtac ccaaatcgat
     1921 gcctgctgcc aaacggtgcc ggtgcgggga ggcggacatg cccggttctg aaatctgcaa
     1981 aagagccata aattctgcct gtcggtgcgg tgtgtaaagg aaggaagtcg gcattttaac
     2041 agaatttgcg ccgatagttg agcaaaccgc taaggattgg gtcgtgccgc cgaaattgcc
     2101 ctctaccgcc aaatgccgat aaaatccgcc tttcccgccc atcattagga atataaatcg
     2161 tgaaaggact cgactattgc cgccaaaaag cagaagaaag ccgctccagt tttttgtcgg
     2221 gcttccgttt cctgactcag gaaaaacgag atgcggtaac ggttttatat gctttttgcc
     2281 gcgaattgga cgatgtggtt gacgaatgtt ccaaccccga tgttgcacag gcgacattga
     2341 actggtggcg cggcgatttg gacaaggtat tcggcggcgc gatgccggaa caccccgtca
     2401 atcaggcctt gcggcaggtt aaggaaacct tcaagctgcc gaaatatgaa ctggaagcct
     2461 taatcgacgg gatgcagatg gatttggttc aagcccgtta cggcagtttt gaagaattga
     2521 aactgtattg ccactgcgtc gcaggcgtgg tcggctgcct gattgcgcgg attttggggt
     2581 tttcagacga ccaaacgctg gaatacgccg acaagatggg acttgcgctg caactgacca
     2641 acatcatccg cgatgtcggc gaagacgcgc gcaggggacg gatttacctg ccgatggagg
     2701 aaatgcggcg gtttgacgta cccgcaagcg tgattttgca atgcagcccg acgggcaatt
     2761 ttgccgaatt gatggcgttc caaatcaaac gcgcccgcga aacctaccgc gaagccgtat
     2821 cgctgctgcc tgatgccgat aaaaaagccc aaaaagtcgg actggtcatg gcggcggttt
     2881 attacgcgct tttaaacgaa atcgaccgag acggcgcgca aaacgtcctc aaatacaaaa
     2941 tcgccctccc ttcgccgcgc aaaaaacgca ttgccctgaa aacctggtta ttcggattca
     3001 aaccgcgccc cggcacgccg gaacgggcat aaggcgcata ccgcccgccg cccgtcaggc
     3061 aaacccgatt cccacagccc gccggacggg gtttcaacca tcgtctgaaa gtctgcatcg
     3121 taaccgcgca atcccgttgg cgttcgcgct ttgaaatcga attgctggga atttaaacag
     3181 gagcagaagt aaatgaaagc agtcagggat atagccttat ggctggcagt aacggtttgg
     3241 atcaactttt tccccgacaa ttaccgctat gataccgttc cacagggacg gtacggatac
     3301 tggcatgcag accatccgtg gtatccctat gtgcgctttc tgctgccttt atttttagcc
     3361 tgtatccttt tctaccgtca ttttcggaaa cggaaataga tacggctgca aaaccattgg
     3421 aggaataaat gatgaacacg ccgcatccgc gcccgaaaat cgccgtcatc ggcgcaggct
     3481 gggcaggact gtccgccgcc gtcaccttgg cgcggcacgc cgacgttacc ctgtttgaag
     3541 ccggccggca ggcgggcggc agggcgcgcg cactggccgg aaataccgac ggtttcggtt
     3601 ttttggacaa cgggcagcac attttgctcg gcgcataccg gggcgtgttg cgcctgatga
     3661 aaaccatcgg ttcagacccc cgtgccgcct ttttgcgcgt accgctgcac tggcatatgc
     3721 acggcggttt gcagttccgc accctccccc tgcccgcgcc gctgcatatt ttgggcggcg
     3781 tgctgcttgc ccggcgcgta ccgtccgcat tcaaagccaa actgcttgcc gatatgtccg
     3841 atttgcagaa gtccgcacgc ctcggacagc ccgacacgac agttgcacaa tggctgaaac
     3901 agcggaacgt gccgtgtgcc gccgtgatgc agttttggca gccgctggtg tggggtgcgc
     3961 tcaacacgcc tttggaaacc gcaagcctgc gcgtgttgtg caacgttttg tccgacggcg
     4021 tgctgacgaa aaaatccggc agcgactatc ttctacccaa gcaggatttg ggcgcaatcg
     4081 tcgccgaacc cgccttggcg gagcttcaac ggctcggcgc ggacatccgc ctcgaaacgc
     4141 gcgtatgccg tctgaacacc ctcccggacg ggaaagtgct cgtcaacggc gaagctttcg
     4201 atgccgccgt ccccgccacc gcgccctacc acgccgccgc gctcctgccc gaaggcacgc
     4261 ccgaacacgt tcagacggca tatcaaaacc ttcgctacca cgccatcacc accgtctatc
     4321 tgcgctacgc cgaacccgtc cgcctgcccg ccccgctgac cggccttgcc gacggcacgg
     4381 tgcaatggct gctttgccgg ggcaggctcg gactgcctga aaacgaagtg tccgccgtca
     4441 tcagcgtttc cgaccgcgtc ggcgcgtttg caaaccgggc gtgggcggac aaagcccacg
     4501 ccgacctcaa acgcatcctt ccgcatttgg gcgaacccga agccgtgcgc gtcatcaccg
     4561 aaaaacgcgc cacaaccgca gccgatgccc cgccgccgga cttgtcgtgg ttgcaccggc
     4621 accgcatctt ccccgccggc gactacctcc acccggacta ccccgccacg ctcgaagccg
     4681 ccgtacaatc aggtttcgcg tcggcggaag cctgcctgca aagcctgagc gatgccgtct
     4741 gaaaacgccg gccggtatcg ggacgcttta caaggtgcgg caaaacgcta aaatacctta
     4801 accgaccacc aaaaaggaaa aagtatggcg acactgtccg acaaaaccat cttagttacc
     4861 ggcgcatcgc aaggtctggg cgaacaggtc gccaaagcct atgcggcggc aggcgcaacc
     4921 gtgattctgg tggcacgcca tcagaaaaaa ctggaaaaag tctatgacgc gattgtcgaa
     4981 gccggatacc ccgaaccatt cgccatctgc tttgacctta ttagcgcgga agaaaaagaa
     5041 tttgaacatt tcgccgccac cattgccgaa gccacgcaag gcaaactgga cggcatcgtc
     5101 cactgcgccg gctattttta cgccctctcg ccgctggatt tccaaaccgt cgccgaatgg
     5161 gtcaaccaat accgcatcaa caccgtcgca cctatggggc tgacccgcgc cctgttcccg
     5221 ctgctgaagc agtcgcccga cgcgtccgtc atcttcgtcg gcgaaagcca cggcgaaaca
     5281 cccaaagcct actggggcgg cttcggcgcg tccaaagccg cgttgaacta cctgtgcaaa
     5341 gtcgccgccg acgaatggga acgcttcggc aacctgcgcg ccaacgtcct cgtccccgga
     5401 cccatcaatt ccccgcaacg catcaaatcc catccgggcg aagccaaaag cgaacgcaaa
     5461 agctacgggg acgtgctgcc cgcatttgtc tggtgggcaa gtaccgaaag caaagggcgg
     5521 agcggcgaaa tcgtttacct ctaaatccgg aaaaggcagg catcccgccc gcgccgcgat
     5581 tccgtttgaa aaatatccgt accttccgcg cgcatccgtc ccgcacagac aaacaccttg
     5641 acttaaattt acataaggac aataatgata acccgttatt tccttaactt gaccttaggg
     5701 taaattttat gaaaaccgtt tccaccgccg ttgtccttgc cgccgctgcc gtttcactga
     5761 ccggctgtgc gaccgaatcc tcacgcagtc tcgaggtaga gaaagtcgcc tcctacaata
     5821 cgcaatatca cggtgttcgt accccgattt ccgtcggaac attcgacaac cgctccagct
     5881 tccaaaaagg cattttctcc gacggggaag accgtttggg cagccaggca aaaaccattc
     5941 tagtaacgca cctgcaacag accaaccgct tcaacgtact gaaccgcacc aatttgaacg
     6001 cattaaaaca ggaatccggc atttccggca aagcgcataa cctgaaaggc gcagattatg
     6061 tcgttaccgg cgatgtaacc gaattcggac gcagagatgt cggcgatcat cagctcttcg
     6121 gcattttggg tcgcggcaaa tcgcaaatcg cctatgcaaa agtggctctg aatatcgtca
     6181 acgtcaatac ttccgaaatc gtctattccg cacagggcgc gggcgaatac gcactttcca
     6241 accgtgaaat catcggtttc ggcggcactt ccggctacga tgcgactttg aacggcaaag
     6301 ttttagactt ggcaatccgc gaagccgtca acagcctggt tcaggctgtt gacaacggcg
     6361 catggcaacc caaccgttaa ggagaaatga tgaatccgaa aaccttgagc cgtttgtcgc
     6421 tgtgtgcggc ggtcttggct ctgaccgcct gcggcggcaa cgggcaaaaa tccctgtatt
     6481 attacggcgg ctatcccgat accgtctatg aaggtttgaa aaacgacgac acttcgttgg
     6541 gcaagcagac cgaaaagatg gaaaaatact ttgtggaagc cggcaacaaa aaaatgaatg
     6601 ccgccccggg tgcgcacgcc catctgggac tgctgctttc ccgttcggga gacaaagagg
     6661 gcgcgttccg ccagtttgaa gaagagaaaa ggctgtttcc cgaatcgggc gtatttatgg
     6721 acttcctgat gaaaacaggt aaaggaggca agcgatgaaa cctttgattt tagggcttgc
     6781 cgccgtgttg gcgctgtctg cctgccaagt tcaaaaagcg cccgatttcg actacacgtc
     6841 attcaaggaa agcaaaccgg cttcaatttt ggtggttccg ccgctgaacg aatcgcccga
     6901 tgtcaacgga acatggggtg tactggcttc gaccgccgcg ccgctttccg aagccggcta
     6961 ttacgtcttc cccgccgcag tcgtggagga aaccttcaaa caaaacggct tgaccaatgc
     7021 cgccgatatt cacgccgtcc ggccggaaaa actgcatcag attttcggca atgatgcggt
     7081 tttgtacatt acggttaccg aatacggcac ttcatatcaa attttagaca gcgtgacgac
     7141 cgtatccgcc aaagcacggc tggtcgattc ccgcaacgga aaagagttgt ggtcgggttc
     7201 ggccagcatc cgcgaaggca gcaacaacag caacagcggc ctgttggggg ctttggtcag
     7261 cgcagtggtc aatcagattg ccaacagcct gaccgaccgc ggttatcagg tttccaaaac
     7321 cgccgcatac aacctgctgt cgccctattc tcacaacggc atcttgaaag gtccgagatt
     7381 cgtcgaagag cagcccaaat aagcatatgc cgtctgaacc tctccgagct tcagacggca
     7441 tatgcgaatc ttgatacttg caagccgcac cgcccaaaat cgggcggccg gtttcaatat
     7501 ccgaacaagg ttcgggttct gtattttgca gaacccgaac cttttattca aatttaaact
     7561 taattccggc gtggttgtat ggtatagtgg attaacaaaa atcaggacaa ggcgacgaag
     7621 ccgcagacag tacaaatagt acggaaccga
//
LOCUS       DAWGKF010000097         7624 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.097, whole genome shotgun sequence.
ACCESSION   DAWGKF010000097 DAWGKF010000000
VERSION     DAWGKF010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7624)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7624)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7624
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.097"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(45..461)
                     /gene="dksA"
                     /locus_tag="WHR07_001413"
     CDS             complement(45..461)
                     /gene="dksA"
                     /locus_tag="WHR07_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HEZ2130621.1"
                     /translation="MAKLTEQDILNWSGPEDDYMNDDHLAFFRELLVKMQDELIENAS
                     ATTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYGFCA
                     DTGEPIGLKRLLARPTATLSVESQERRERMKKQFAD"
     gene            complement(608..1399)
                     /locus_tag="WHR07_001414"
     CDS             complement(608..1399)
                     /locus_tag="WHR07_001414"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEZ2130622.1"
                     /translation="MNVYFLGGGNMAAAVAGGLVKQGGYRIHIANRGAEKRERLQKEL
                     GVETSETLPELHSDDVLILAVKPQDMEAACKNIRTNGALVLSVAAGLPVDTLSRYLGG
                     TRRIVRVMPNTPGKIGLGVSGMYAEAEVSETDRRIADRIMKSVGLTVWLEDEAQMHSI
                     TGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKGAVALAEQTGEDFEKLQ
                     KNVTSKGGTTHEAVEAFRRHRVAEAISEGVCACVRRSQEMERQYQ"
     gene            complement(1448..1855)
                     /locus_tag="WHR07_001415"
     CDS             complement(1448..1855)
                     /locus_tag="WHR07_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HEZ2130623.1"
                     /translation="MEIRAIKYTATAALLAFTVAGCRLAGWYECSSLSGWCKPRKPAA
                     IDFWDIGGESPPSLEDYEIPLSDGNRSVRAKEYESAQQSYFYRKIGKFEACGLDWRTR
                     DGKPLIETFKQEGFDCLKKQGLRRNGLSERVRW"
     gene            complement(1855..2541)
                     /locus_tag="WHR07_001416"
     CDS             complement(1855..2541)
                     /locus_tag="WHR07_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEZ2130624.1"
                     /translation="MTVLQERYREVSDRIGKLVLQAGRKPHSVSLIAVGKTFPLDGIR
                     EVYAAGQRDFGENYIQEWYGKTEELADLTDIVWHVIGDVQSNKTKFVAERAHWVHTVC
                     RLKTAVRLSGQRPSSMPPLQVCIEVNIAGEAAKHGVAPEEAVALAVEVAKLPNLVVRG
                     LMCVAKANSSETELKTQFQTMQKLLADLNTAGVKADVLSMGMSDDMPAAIECGATHVR
                     IGSAIFGKRG"
     gene            2661..3704
                     /locus_tag="WHR07_001417"
     CDS             2661..3704
                     /locus_tag="WHR07_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HEZ2130625.1"
                     /translation="MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSA
                     EEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVARFRVNAFNTGRGPAAVFRTIPST
                     VLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
                     PIEFVHQSKKSLINQRELHQHTLSFANALRSALREDPDVILVGEMRDPETIGLALTAA
                     ETGHLVFGTLHTTGAAKTVDRIVDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNG
                     RVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQSLQSLVRQGLIAPEV
                     ARRRAQNSESMSF"
     gene            3867..5093
                     /locus_tag="WHR07_001418"
     CDS             3867..5093
                     /locus_tag="WHR07_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEZ2130626.1"
                     /translation="MNTDNLHDILDEMVQVYSQKKQSRSETPAEIGAHFHPLLDRLCE
                     TAEAQNASDILISKGFPPSLKINSALTPQPQKALTGEETAAIAASTMNAEQSEIFRRD
                     GEINYSVQSRSGTRYRANAYHSQGSAGLVLRRINHVIPQMQELGLPEKLKDLAVAPCG
                     LLIIVGPTGSGKSTTMATMLEHRNKTLPSHIVTIEDPIEFIYKPRRCIFTQREIGVDT
                     INWQTAVQNAMRQSPDVVCIGEVRSRESMEYAMQLAQTGHLCIFTLHANTAPQSLERI
                     LNFYPKEQHNQILIDIALNLTGIICQRLALKQDKTGRTAVVDLLINTPAIQDFILKGD
                     LMNISKIMETAKTDGMQTMDQNLFELYRHGIISYEEALRQSVSANNLRLHIQLHKEGK
                     TPELLYDRVNGLNLIS"
     gene            5379..7529
                     /gene="yccS"
                     /locus_tag="WHR07_001419"
     CDS             5379..7529
                     /gene="yccS"
                     /locus_tag="WHR07_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01666 family membrane protein"
                     /protein_id="HEZ2130627.1"
                     /translation="MKTPLLKPLLITSLPVFASVFTAASIVWQLGEPKLAMPFVLGII
                     AGGLVDLDNRLTGRLKNIIASVALFTLSSLTAQSTLGTGLPFILAMTLMTFGFTILGA
                     VGLKYRTFAFGALAVATYTTLTYTPETYWLTNPFMILCGTVLYSTAILLFQIVLPHRP
                     VQESVANAYDALGGYLEAKADFFDPDEAEWIGNRHIDLAMSNTGVITAFNQCRSALFY
                     RLRGKHRHPRTAKMLRYYFAAQDIHERISSAHVDYQEMSEKFKNTDIIFRIHRLLEMQ
                     GQACRNTAQALRASKDYVYSKRLGRAIEGCRQSLRLLSDGNDSPDIRHLGRLLDNLGS
                     VDQQFRQLQHSDSPAENDRMGDTRIAALETGSFKNTWQAIRPQLNLESGVFRHAVRLS
                     LVVAAACTIVEALNLNLGYWILLTALFVCQPNYTATKSRVRQRIAGTVLGVIVGSLVP
                     YFTPSVETKLWIVVVSTTLFFMTRTYKYSFSTFFITIQALTSLSLAGLDVYAAMPVRI
                     IDTIIGASLAWAAVSYLWPDWKYLTLERTAALAVCSNGAYLEKITERLKSGETGDDVE
                     YRATRRRAHEHTAALSSTLSDMSSEPAKFADSLQPGFTLLKTGYALTGYISALGAYRS
                     EMHEECSPDFTAQFHLAAEHTAHIFQHLPDMEPDRFDAELDSLRSELDNLRVQSVGAQ
                     SHILLQQLQLIARQLEPYYRAYRQIPHRQPQNAA"
BASE COUNT         1858 a         2531 c         1689 g         1546 t
ORIGIN      
        1 ctgtctgaaa cttagggctt cagacggcat tttgtttgcc gccatcagtc ggcaaactgt
       61 tttttcatcc tctctcggcg ttcttgggac tcaacagata aagtggctgt cgggcgtgcc
      121 agcagccgct tcagaccgat aggctctccc gtatcggcac agaatccata atccccttca
      181 tcaatattgc ggatggtcgc ctgtatttta ctgagaagtt ttcgttcccg atcgcgggta
      241 cggagttcca atgcgtactc ttcttcctgt gtggcacggt cggcaggatc gggggctgat
      301 tcgtgttctt ggagatgccc tgtcgtagcg gaagcatttt cgatgagttc gtcttgcatt
      361 tttaccagca attcgcggaa aaaagccaaa tggtcgtcat tcatataatc gtcttccggc
      421 ccgctccaat tcaaaatatc ttgttctgtc agctttgcca taatgtatat cctctcggtt
      481 caccgaaaaa aacaaagcac cacaaagtgg ctttattcct ttgattttta taaggcttat
      541 tgcctaaggc gtttttgaaa acgcgcatca taacacgttt tggattggtt tttttatttt
      601 ctttacatta ttgatattgc cgttccattt cctgcgaacg gcgcacacag gcacaaacgc
      661 cctcacttat ggcttcggcg acacgatgcc gcctgaaggc ttccacggct tcgtgggttg
      721 tcccgccttt tgacgttaca tttttttgaa gcttctcgaa atcttcaccc gtctgctcgg
      781 caagggcaac cgctccttta aacgttgcca gactgagcgc gcgtgcttct gccatatcaa
      841 acccttgtcg gatggcggca ttttgcaatg cgtccagcag ataaaacaca tatgccggcc
      901 cgctgccgct gataccggta atgctgtgca tttgcgcttc atcttccaac caaacagtca
      961 aaccgactga tttcatgatt cgatcggcaa tcctgcggtc tgtttccgat acttccgctt
     1021 cggcatacat accggatacg cccagcccga tttttccggg tgtattcggc ataacccgga
     1081 caatgcggcg tgttcccccg aggtaacggc tgagcgtatc gaccggcaat ccggctgcga
     1141 cagaaagcac caatgcgccg ttggtgcgga tatttttgca cgcggcttcc atatcctgcg
     1201 gcttgacggc aaggattaaa acatcgtcgg aatgaagctc cggcaaggtt tcagaagttt
     1261 cgacccccaa ctctttttgc aaacgttcgc gcttttccgc accccggttg gcaatatgga
     1321 tgcggtaacc gccttgtttg accaatccgc ccgcaacggc agccgccata ttgccgccgc
     1381 cgagaaaata aacattcatt atttctaccc tattcaaaat tacctgacta aattcattcc
     1441 caatttttta ccatcggacg cgctcggaca gaccgttgcg ccgcaacccc tgctttttca
     1501 aacaatcaaa accttcctgt ttgaacgtct caatcaaagg tttgccgtca cgcgtacgcc
     1561 aatccaaccc gcaggcttca aacttcccta ttttcctgta aaagtaagat tgttgtgcgg
     1621 attcatattc ctttgccctg acggaacgat tgccgtctga aagcggtatc tcgtagtcct
     1681 ctaaagacgg cggactctcg ccgccaatat cccaaaaatc gatggcggcc ggttttctcg
     1741 gcttacacca gccggacagg gacgaacact cataccaacc cgccaaccgg cagcctgcaa
     1801 ccgtaaaggc aagcaacgca gccgttgccg tatattttat tgcccgaatt tccatcatcc
     1861 ccttttcccg aaaatcgcgc tgccgatacg gacgtgtgtc gcaccgcact caatggcggc
     1921 aggcatatcg tccgacatcc ccatagacag cacgtccgcc ttaacgccag ccgtattgag
     1981 gtcggcaagc aacttttgca tggtctgaaa ctgggttttc aactccgttt cactgctgtt
     2041 ggctttggca acgcacatca gtccgcgcac gacaaggttg ggcaacttcg ccacttcgac
     2101 cgcaagcgcg accgcttctt cgggagcaac accgtgcttt gccgcctcgc ctgcaatatt
     2161 cacctcgata cacacctgca aaggcggcat tgaagaagga cgctgcccac tcagccggac
     2221 ggcggtcttt agacggcata cggtatgcac ccaatgcgcg cgttcggcga caaacttggt
     2281 tttgttggac tgcacatcgc cgatgacgtg ccacacgatg tcggtcaaat ccgccaactc
     2341 ttccgttttg ccgtaccact cctgaatata gttctcgccg aaatcacgct gtccggcggc
     2401 gtaaacttcg cggatgccgt ctaaagggaa agtcttaccg acggcaatca ggctgacgga
     2461 atgcggcttc cttcccgcct gcagaaccaa ttttccaata cggtcggaca cctcccgata
     2521 acgttcttgc aacaccgtca tagattatcc cctaattaaa aatgattaaa cagttgaaac
     2581 ccctccagtc agggcggtac aatcaaggtt gttagaacca ttccaaccaa tcgaaacatt
     2641 atactaaaca gagccgcatt atgcagatta ccgacttact cgccttcggc gctaaaaaca
     2701 aagcatccga ccttcacctg agttcgggca tatcccctat gattcgggtt cacggcgata
     2761 tgcggcgcat caaccttccc gaaatgagcg cggaagaggt cggtaatatg gtaacttcgg
     2821 tgatgaacga ccaccagcgg aaaatctacc agcaaaactt ggaagtcgac ttctcgttcg
     2881 aactgcccaa cgtcgcccga ttccgcgtca acgccttcaa caccggccgc ggtcccgccg
     2941 ccgtattccg caccattccc agcaccgtct tatcgctgga agaattgaaa gccccgagca
     3001 ttttccaaaa aatcgcagaa tcgccgcgcg gcatggtatt ggttaccggc cctaccggtt
     3061 cgggcaaatc gaccacgctt gccgcgatga tcaactacat caacgaaacc cagccggcac
     3121 acatcctgac catcgaagac ccgatcgaat tcgtccacca aagcaaaaaa tccctgatta
     3181 accagcgcga gctgcaccag cacaccctca gcttcgccaa cgcgctgcgt tccgcattgc
     3241 gcgaagaccc cgacgttatc cttgtcggcg agatgcgcga ccccgaaacc atcggcttgg
     3301 cactgaccgc cgccgaaacc ggacacttgg ttttcggcac gctgcacacg accggcgcag
     3361 caaaaaccgt cgaccgtatc gtggacgtat tcccggcggg agaaaaagaa atggtgcgct
     3421 ctatgctgtc cgaatcgctg accgccgtca tctcccaaaa cctgctgaaa acgcacgacg
     3481 gcaacggccg tgtcgcctcg cacgaaatcc tgattgccaa ccccgccgtc cgcaacctca
     3541 tccgcgaaaa caaaatcacg cagattaact ccgtcctgca aaccgggcag gcgagcggta
     3601 tgcagacaat ggaccaatcg ctgcaatcgc tggtgcgcca agggctgatc gcaccggaag
     3661 tcgcacgcag acgcgcgcaa aacagcgaaa gtatgagttt ctgacacaca accgccttcc
     3721 ggccataccg gcgggaaaac aaggcgcaaa cacgcggggc gggacgcagc atcccgcccg
     3781 gctacctttc cgaacaagaa gcgtccgcct tcctgttgaa acctgccgcc gcaaactgca
     3841 aggcttaaac cgaaaagaag ctaacgatga ataccgataa cctgcacgac atcttggacg
     3901 aaatggttca agtgtattct caaaaaaaac aaagccgatc cgaaaccccg gccgaaatcg
     3961 gcgcacactt ccacccgctg ctcgaccgcc tgtgcgaaac cgcagaagca caaaacgcgt
     4021 ccgacatcct tatcagcaaa ggattcccgc cctcgttgaa aatcaacagc gcattaaccc
     4081 cgcagccgca aaaggcgctg acaggcgagg aaaccgccgc catcgccgca tcgacgatga
     4141 acgccgaaca atcggaaata ttccggcgcg acggcgaaat caactactcc gtccagtcgc
     4201 gcagcggcac gcgctaccgc gccaacgcct accacagcca aggcagcgca ggtttggttt
     4261 tgcggcgcat caaccacgtc atcccgcaaa tgcaggaatt gggcctgccc gaaaaactca
     4321 aagacctcgc cgtcgcaccg tgcgggctgc tgattatcgt cgggcctacc ggttcgggca
     4381 aatccaccac gatggcgact atgctcgaac accgcaacaa aaccctgccc agccatatcg
     4441 ttaccatcga agacccgatt gagtttatct acaaaccgcg ccgctgcatc tttacccagc
     4501 gcgaaatcgg cgtcgacacc ataaactggc agacggcggt acaaaacgct atgcgccaat
     4561 cccccgacgt ggtctgcatc ggcgaagtcc gcagcaggga aagtatggaa tacgcgatgc
     4621 agctcgccca aaccggccac ctgtgcattt ttacgctcca cgccaacacc gcgccgcagt
     4681 cgctcgaacg catactcaac ttctacccca aagaacagca caaccaaata ctgatcgaca
     4741 tcgccctcaa cctgaccggc atcatctgcc aacgcctcgc cctcaaacaa gacaaaacgg
     4801 gcaggacggc ggttgtcgac ttgctcatca acacgcccgc catccaagac ttcatcctga
     4861 agggcgacct gatgaacatc agtaaaatca tggaaaccgc caaaaccgac ggaatgcaga
     4921 cgatggatca aaaccttttc gaactgtacc gtcacggcat catcagttac gaagaagccc
     4981 tgcgccagtc cgtttccgcc aacaacctgc gattgcacat ccaactgcac aaagaaggca
     5041 aaacgcccga actcctttac gacagggtca acggtctcaa cctcatttcc tgatccgcaa
     5101 aacccaatgc cgtctgaaaa ccgcatcccc gttttcagac ggcatgattt tatccgcccc
     5161 attcatgtgc tacactttat agtggattaa atttatagtg gattaacaaa aatcaggaca
     5221 aggcgacgaa gccgcagaca gcacaaatag tacggaaccg attcacttgg tgcttcagca
     5281 ccttagagaa tcgttctctt tcagctaagg cgaggcaacg ccgtactggt ttttgttaat
     5341 ccactatatt cacttcataa caataaatcg gtaaaaccat gaaaacccca ctcctcaagc
     5401 ctctgctcat tacctcgctt cccgttttcg ccagcgtctt taccgccgcc tccatcgtct
     5461 ggcagctagg cgaacccaag ctcgccatgc ccttcgtact cggcatcatc gccggcggcc
     5521 tggtcgattt ggacaaccgc ctgaccggac ggctgaaaaa catcattgcc tccgtcgccc
     5581 tgttcactct ctcctcgctc acagcacaaa gcaccctcgg cacagggctg cccttcatcc
     5641 tcgccatgac cctgatgacc ttcggcttca ccattttagg cgcagtcgga ctcaaatacc
     5701 gcaccttcgc cttcggcgca ctcgccgtcg ccacctacac tacgcttacc tacacccccg
     5761 aaacctactg gctgaccaac ccctttatga ttctgtgcgg caccgtactg tacagcaccg
     5821 ccatcctcct gttccaaatc gtcctgcccc accgccctgt ccaagaaagc gtcgccaacg
     5881 cctacgacgc actcggcggc tacctcgaag ccaaagccga cttcttcgac cccgacgaag
     5941 ccgaatggat aggcaaccgc cacatcgacc tcgccatgag caacacaggc gtcatcaccg
     6001 ccttcaacca atgccgttcc gccctgtttt accgccttcg cggcaaacac cgccacccgc
     6061 gcaccgccaa aatgctgcgc tactacttcg ccgcccaaga catacacgaa cgcatcagct
     6121 ccgcccacgt cgactaccaa gagatgtccg aaaaattcaa aaacaccgac atcatcttcc
     6181 gcatccaccg cctgctcgaa atgcagggac aagcctgccg caacaccgcc caagccctgc
     6241 gcgcaagcaa agactacgtt tacagcaaac gcctcggccg cgccatcgaa ggctgccgcc
     6301 aatcgctgcg cctcctttca gacggcaacg acagccccga catccgccac ctcggccgcc
     6361 tactcgacaa cctcggaagc gtcgaccagc agttccgcca actccaacac agcgactccc
     6421 ccgccgaaaa cgaccgcatg ggcgacaccc gcatcgccgc cctcgaaacc ggcagcttca
     6481 aaaacacctg gcaggcaatc cgtccgcagc tgaacctcga atcgggcgta ttccgccatg
     6541 ccgtccgcct gtccctcgtc gttgccgccg cctgcaccat agtcgaagcc ctcaacctca
     6601 acctcggcta ctggatactg ctgaccgccc ttttcgtctg ccagcccaac tacaccgcca
     6661 ccaaaagccg cgtccgccag cgcatcgccg gtaccgtact cggcgtaatc gtcggctcgc
     6721 tcgtccccta cttcaccccg tctgtcgaaa ccaagctttg gattgtcgtc gtcagcacca
     6781 ccctcttttt catgacccgc acctacaaat acagcttctc gacatttttc atcaccattc
     6841 aggcactgac cagcctgtcg cttgcagggt tggacgtata cgccgccatg cccgtgcgca
     6901 tcatcgacac cattatcggc gcatcccttg cctgggcggc ggtcagctac ctatggccag
     6961 actggaaata cctcacgctc gaacgcaccg ccgcccttgc cgtatgcagc aacggcgcct
     7021 atctcgaaaa aatcaccgaa cgcctcaaaa gcggcgaaac cggcgacgac gtcgaatacc
     7081 gcgccacccg ccgccgcgcc cacgaacaca ccgccgccct cagcagcacc ctttccgaca
     7141 tgagcagcga acccgcaaaa ttcgccgaca gcctgcaacc cggctttacc ctgctcaaaa
     7201 ccggctacgc cctgaccggc tacatctccg ccctcggcgc ataccgcagc gaaatgcacg
     7261 aagaatgcag ccccgacttt accgcacagt tccacctcgc cgccgaacac accgcccaca
     7321 tcttccaaca cctgcccgac atggaacccg accgcttcga cgcagaatta gacagcctgc
     7381 gcagcgaact tgacaacctg cgcgtgcaaa gcgtcggcgc gcaaagccat atcctcctcc
     7441 aacagctcca actcatcgcc cgacagctag aaccctacta ccgcgcctac cgccaaattc
     7501 cgcacaggca gccccaaaac gcagcctgaa aaagtttcgg cattttgtaa gagagagcag
     7561 attgtcagac aggttgcaag atagtggata aagctttgcg cagggtaaat gcgtagcaac
     7621 tgaa
//
LOCUS       DAWGKF010000098         7541 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.098, whole genome shotgun sequence.
ACCESSION   DAWGKF010000098 DAWGKF010000000
VERSION     DAWGKF010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7541)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7541)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7541
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.098"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            24..419
                     /locus_tag="WHR07_001420"
     CDS             24..419
                     /locus_tag="WHR07_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HEZ2130628.1"
                     /translation="MFGLHKSFGFLTLTVITLRIVWAVANRAKRPQSDSKAAAAGHGI
                     LYLLMLAVPVIGMIRQYGSGRGPLKVFGVEVMQGSPEKIEWMANLGNTFHGNLGWLLF
                     AAVVGHVAMVVVHRVQGKDVLYRMTGRVR"
     gene            complement(454..1329)
                     /gene="rsmI"
                     /locus_tag="WHR07_001421"
     CDS             complement(454..1329)
                     /gene="rsmI"
                     /locus_tag="WHR07_001421"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEZ2130629.1"
                     /translation="MFQKHLQKASDSVVGGTLYVVATPIGNLADITLRALAVLQKADI
                     ICAEDTRVTAQLLSAYGIQGKLVSVREHNERQMADKIVGYLSDGMVVAQVSDAGTPAV
                     CDPGAKLARRVREVGFKVVPVVGASAVMAALSVAGVAGSDFYFNGFVPPKSGERRKLF
                     AKWVRAAFPVVMFETPHRIGATLADMAELFSERRLMLAREITKTFETFLSGTVGEIQT
                     ALSADGNQSRGEMVLVLYPAQDEKHEGLSESAQNIMKILTAELPTKQAAELAAKITGE
                     GKKALYNLALSWKNK"
     gene            1376..1723
                     /locus_tag="WHR07_001422"
     CDS             1376..1723
                     /locus_tag="WHR07_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HEZ2130630.1"
                     /translation="MRLNHKQGEAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKN
                     GGMILFVEVKYRKNRQFGGAAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIE
                     GSRPPEWIQNITG"
     gene            1728..2321
                     /locus_tag="WHR07_001423"
     CDS             1728..2321
                     /locus_tag="WHR07_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoheptose isomerase"
                     /protein_id="HEZ2130631.1"
                     /translation="MTTLQERVAAHFAESIRAKQEAGKVLVEPTVQAAELMLQCLMND
                     GKILACGNGGSAADAQHFAAEMTGRFEKERMELAAVALTTDTSALTAIGNDYGFNHVF
                     SKQVRALGRAGDILVGISTSGNSANVIEAIKAAHERDMHVIALTGRDGGKIAAILKDT
                     DVLLNVPHPRTARIQENHILLIHAICDCIDSVLLEGM"
     gene            2385..2993
                     /locus_tag="WHR07_001424"
     CDS             2385..2993
                     /locus_tag="WHR07_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HEZ2130632.1"
                     /translation="MKPKPHTVRTLIAAIFSLALSGCVSAVIGSAAVGAKSAVDRRTT
                     GAQTDDNVMALRIETTARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFV
                     GQIARSEQAAEGVYNYITVASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIVT
                     YGNVTYVMGILTPEEQAQITQKVSTTVGVQKVITLYQNYVQR"
     gene            3001..3651
                     /locus_tag="WHR07_001425"
     CDS             3001..3651
                     /locus_tag="WHR07_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130633.1"
                     /translation="MPSEPPSDGIARHPKSTIKMAKKPNKPFRLTPKLLIRAVLLICI
                     TAIGALAIGIVSTFNPNGDKTLQAEPQHTDSPRETEFWLPNGVVGQDAAQPEHHHAAS
                     SEPAQPDGTDESGSGLPSPAAPKKNRVKPQPADTAQTDRQPDDAGTQAENTLKETPVL
                     PTNVPRPEPRKETPEKQAQPKETPKEKETPKENHTKPDTPKNTPPKPHKEILDNLF"
     gene            3691..4470
                     /gene="map"
                     /locus_tag="WHR07_001426"
     CDS             3691..4470
                     /gene="map"
                     /locus_tag="WHR07_001426"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEZ2130634.1"
                     /translation="MNGIIIKTPEEIEKMRELGKLVAEALDYIGQFVKPGVTTDEIDK
                     LVYDYHVNVQGGYPAPLHYGNPPYPKSCCTSVNHVICHGIPDDKPLKEGDIINIDLTI
                     KKDGFHGDSSRMFTVGKVSPIAQRLIDVTHASMMAGIEAVKPGATLGDVGYACQQVAE
                     NAGYSVVQEFCGHGIGRGFHEAPQVLHYGKKGQGSVLKPGMIFTVEPMINQGKRHLRI
                     LNDGWTVVTKDRSLSAQWEHEVLVTETGYEILTVSPASGKP"
     gene            4625..4924
                     /locus_tag="WHR07_001427"
     CDS             4625..4924
                     /locus_tag="WHR07_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HEZ2130635.1"
                     /translation="MKIFENIEDVKAIRKKTGLNQIDFWGKVGVTQSGGSRYEIGRKM
                     PKPVRELLRLVHIECIDLAKVNKKDMEIAALLKKHHPDLYAELSKQTKSERKKQS"
     gene            5155..5529
                     /locus_tag="WHR07_001428"
     CDS             5155..5529
                     /locus_tag="WHR07_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HEZ2130636.1"
                     /translation="MKLLTTAILSSAIALSSMAAAAGTNNPTVAKKTVSYVCQQGKKV
                     KVTYGFNKQGLTTYASAVINGKRVQMPVNLDKSDNVETFYGKEGGYVLGTGVMDGKSY
                     RKQPIMITAPDNQIVFKDCSPR"
     gene            complement(5717..7183)
                     /locus_tag="WHR07_001429"
     CDS             complement(5717..7183)
                     /locus_tag="WHR07_001429"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate:quinone oxidoreductase"
                     /protein_id="HEZ2130637.1"
                     /translation="MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALE
                     SSNAWNNAGTGHSALCELNYAPLGANGIIDPARALNIAEQFHVSRQFWATLVAEGKLE
                     DNSFINAVPHMSLVMNEDHCSYLQKRYDAFKTQKLFENMEFSTDRNKISDWAPLMMRG
                     RDENQPVAANYSAEGTDVDFGRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLK
                     TADTRNPDGQLTLRTRFLFLGAGGGALTLLQKSGIPEGKGYGGFPVSGLFFRNSTPET
                     AEQHNAKVYGQASVGAPPMSVPHLDTRNVDGKRHLMFGPYAGFRSNFLKQGSLMDLPL
                     SIHMDNLYPMLCAGWANMPLTKYLLGELRKTKEERFASLLEYYPEANPDDWELITAGQ
                     RVQIIKKDSEKGGVLQFGTEIVAHADGSLAALLGASPGASTAVPLMIRLMHQCFPERA
                     PSWEGRLKELVPGYGIKLNENPERADEIIAYTAKVLDI"
BASE COUNT         1946 a         2285 c         1844 g         1466 t
ORIGIN      
        1 aagaggcgga atgggcgggc agcctgttcg gcctgcacaa atctttcggc ttcctcacgc
       61 tgacggtgat tacattgcgc atcgtgtggg cagttgccaa ccgcgccaag cgtccgcaaa
      121 gcgacagcaa ggctgcggcg gcaggacacg gcattctgta tctgctcatg cttgccgttc
      181 ccgttatcgg catgatccgc caatacggca gcggccgcgg cccgttgaaa gtgttcggcg
      241 ttgaggtgat gcagggttcg ccggaaaaaa tcgagtggat ggcaaacttg ggcaacacgt
      301 tccacggcaa tttgggctgg ctgctgtttg ccgccgtcgt cggacacgtc gccatggtcg
      361 tcgtccaccg tgttcaaggc aaagacgtgc tgtaccgcat gacggggcgt gtccgttgat
      421 tccgttcgca ctatggtgcc ggtccgtccg gcatcatttg tttttccaag acagtgccag
      481 attgtacaaa gctttttttc cctcgcccgt gattttggcg gcaagctccg ccgcctgttt
      541 ggtcggcagc tcggctgtga ggattttcat gatgttttgc gcggactcgg acaagccttc
      601 gtgtttttca tcctgcgccg gataaagcac caacaccatc tcaccgcgcg attggttgcc
      661 gtcggcagac aatgccgtct gaatttcccc aaccgtgccg cttaagaacg tttcaaacgt
      721 tttcgtaatt tcgcgcgcca gcattaatcg gcgttcggag aacagttccg ccatatcggc
      781 aagcgtcgca ccgatgcggt gcggcgtttc aaacatcacg acgggaaacg ccgcccgcac
      841 ccatttggca aacagtttcc tgcgctctcc cgatttcggc ggtacaaaac cgttgaaata
      901 aaaatcggat cccgccacac cggccacact caaagccgcc atcaccgcgc ttgcgccgac
      961 aacagggaca actttaaacc cgacctcacg cacgcggcgg gcgagtttcg cgcccgggtc
     1021 gcacacggcc ggcgtacccg catcggaaac ctgtgccaca accatgccgt ctgaaagata
     1081 gccgacaatc ttgtccgcca tctgccgttc gttgtgttcg cgcacgctga caagtttgcc
     1141 ctgaatgccg tacgcgctca aaagctgcgc ggtaacgcgc gtgtcttcgg cacagatgat
     1201 gtccgccttt tgcaataccg ccaaagcgcg cagggtaatg tccgccaaat tgccgatggg
     1261 cgtggcaacc acgtataatg tccctccgac gacgctgtcg gaggctttct gcaagtgttt
     1321 ctgaaacata aaaaatgccg tctgaaaaac agacattata aaggttaaac cgattatgcg
     1381 cctaaaccac aaacagggcg aggcagggga agatgccgcg cttgccttcc tccaatccca
     1441 aggctgcaca ctgcttgccc gcaactggca ctgcgcctac ggcgaaatcg acctgattgt
     1501 caaaaacggc ggcatgattc tgtttgttga agtaaaatac cgcaaaaatc ggcaattcgg
     1561 cggtgccgca tacagcattt ccccatccaa attattgaaa ctgcaacgaa gtgtagagta
     1621 ttatctgcaa cagaacaggt tgacaaacgt accgtgccgc ctcgacgcgg tactcatcga
     1681 aggcagccgc ccgcccgagt ggatacagaa tattacaggt tgacgatatg acgacattac
     1741 aagaacgcgt tgccgcccat tttgccgaaa gcatccgtgc caagcaggaa gccggaaaag
     1801 tattggtcga gccgaccgta caggctgccg agctgatgct gcaatgcctg atgaacgacg
     1861 gcaagattct ggcgtgcggc aacggcggtt cggctgccga cgcgcagcac ttcgccgccg
     1921 aaatgaccgg acgctttgaa aaagagcgca tggaactcgc cgccgtcgcc ctgaccacag
     1981 acacctccgc gctgaccgcc atcggtaacg actacggctt caaccacgtc ttcagcaaac
     2041 aggtacgcgc cctcggacgc gccggcgaca tcctcgtcgg catttccact tccggcaatt
     2101 ccgccaacgt catcgaagcc attaaagcgg cacacgaacg cgatatgcac gtcatcgccc
     2161 tgaccggccg cgacggcggc aaaatcgccg ccatactcaa agacaccgac gttctgctca
     2221 acgtccccca tccgcgcacc gcccgcattc aggaaaacca catcctgctg atacacgcca
     2281 tatgcgactg tatcgactcc gtactgctgg aaggaatgta acccttttca gacggcatgg
     2341 cgcaaagcaa tgccgtctga aacgcccaag aaaggaagcc cccgatgaaa cccaaaccgc
     2401 acaccgtccg caccctgatt gccgccattt tcagccttgc ccttagcggc tgcgtcagcg
     2461 cagtaatcgg aagcgccgcc gtcggcgcga aatccgccgt cgaccgccga accaccggcg
     2521 cgcaaaccga cgacaacgtt atggcgttgc gtatcgaaac caccgcccgc tcctatctgc
     2581 gccaaaacaa ccaaaccaaa ggctacacgc cccaaatctc cgttgtcggc tacaaccgcc
     2641 acctgctgct gctcggacaa gtcgccaccg aaggcgagaa acagttcgtc ggtcagattg
     2701 cacgttccga acaggccgcc gaaggcgtat acaactacat taccgtcgcc tccctgccgc
     2761 gcactgccgg cgacatcgcc ggcgacactt ggaacacatc caaagtccgc gccacgctgt
     2821 tgggcatcag ccccgccaca caggcgcgcg tcaaaatcgt tacctacggc aacgtaacct
     2881 acgttatggg catcctcacc cccgaagaac aggcgcagat tacccaaaaa gtcagcacca
     2941 ccgtcggcgt acaaaaagtc atcaccctct accaaaacta cgtccaacgc tgactcggca
     3001 atgccgtctg aaccgccttc agacggcatt gcccgacacc ccaaaagcac aatcaaaatg
     3061 gcaaaaaaac cgaacaaacc cttcaggctg acccccaaac tcctgatacg cgccgtattg
     3121 ctcatctgta tcaccgccat cggcgcattg gcaataggca tcgtcagcac attcaacccg
     3181 aacggcgaca aaacccttca agccgaaccg caacacaccg acagcccccg cgaaaccgaa
     3241 ttctggctgc caaacggcgt agtcggacaa gatgccgccc aacccgaaca ccaccacgcc
     3301 gcctcatccg aacccgcaca gccggacggc acagacgaaa gcggcagcgg actgccgtcc
     3361 cctgccgcac ccaagaaaaa ccgggtcaaa ccgcaacctg ccgacacagc tcaaaccgac
     3421 aggcagccgg acgacgccgg aacacaagct gaaaacacac tcaaagaaac ccccgtactg
     3481 cccacaaacg tcccccgtcc cgaaccccga aaagaaacac ccgaaaaaca ggcgcagccc
     3541 aaagaaacac ccaaagaaaa agaaacgccc aaagaaaacc ataccaaacc ggacaccccg
     3601 aaaaacacgc cgcccaaacc ccataaagaa attctcgaca acctcttctg acccggcacg
     3661 gcaggcacac ccgcaatcca aggaagcatt atgaacggca tcatcatcaa aacccccgaa
     3721 gaaatcgaaa aaatgcgcga gctgggcaaa ctcgtcgccg aagccctcga ctacatcgga
     3781 caattcgtca aacccggcgt aaccaccgac gaaatcgaca aactcgttta cgactaccac
     3841 gtcaacgtcc aaggcggcta tcccgccccc ctgcactacg gcaacccgcc ctaccccaaa
     3901 tcctgctgca cctccgtcaa ccacgtcatc tgccacggca ttcccgacga caagccgctc
     3961 aaagaaggcg acattatcaa catcgacctc accatcaaaa aagacggctt ccacggcgac
     4021 tccagccgta tgtttaccgt cggcaaagtc tcccccatcg cccaacgcct gatcgacgta
     4081 acccacgcct ccatgatggc gggcatagaa gccgtcaaac ccggcgcgac actgggcgac
     4141 gtaggttacg cctgccaaca ggttgccgaa aacgccggct attccgtcgt acaggaattc
     4201 tgcggacacg gcatcgggcg cggtttccac gaagccccgc aagtgttgca ctacggaaaa
     4261 aaaggacagg gctccgttct aaaaccgggt atgattttta ccgtcgaacc gatgatcaac
     4321 caaggcaaac gccacctgcg tatcctcaac gacggctgga cggtggttac caaagaccgc
     4381 tccctctccg cccaatggga acacgaagtc ttggtgaccg aaaccggcta cgaaatcctc
     4441 accgtcagcc ccgcctccgg caaaccctga agccggacgt atccgcccca taaaaacaaa
     4501 caatgccgtc tgaaagaaac ggcagatatg atatataata taaaaacagg cttgacccgg
     4561 cacattacga aaacaaagca aatcggaatt tgccccgcaa ccagacaaac ttaaaggaag
     4621 ttttatgaaa atatttgaaa atatagaaga tgttaaagcc atccgtaaaa agaccgggct
     4681 gaaccagata gacttctggg gcaaggtcgg cgttacccag tctggaggct cgcgctacga
     4741 aatcggccgc aaaatgccca aacccgtacg cgaactgctc cgcctcgtcc atatcgaatg
     4801 catcgatttg gcgaaagtca acaaaaaaga tatggaaatc gccgccctgt tgaaaaaaca
     4861 ccatcccgac ctatatgccg agttgtccaa acagaccaag tccgaaagaa aaaaacaaag
     4921 ttaaaccgca acctccggat gcccgacagt ttttcatttc cgaaaaacgc aaacaatgcc
     4981 gtctgaaaca ccggacaggt cgccgtatgc cgcccctgcc tcaaaccgcc gaaccgcccg
     5041 aacccgcctt tttacaaact ttatccaatt tcctgtttat ttcaggatac gccgacatta
     5101 gaatgtcaaa cagctcgaaa cgggcaaact ccacatccat ccaaaggaat aaaaatgaaa
     5161 cttctgacca ccgcaatcct gtcttccgca atcgcgctca gcagtatggc tgctgctgcc
     5221 ggcacgaaca accccaccgt tgccaaaaaa accgtcagct acgtctgcca gcaaggtaaa
     5281 aaagtcaaag taacctacgg cttcaacaaa cagggtctga ccacatacgc ttccgccgtc
     5341 atcaacggca aacgtgtgca aatgcctgtc aatttggata aatccgacaa tgtggaaaca
     5401 ttctacggca aagaaggcgg ttatgttttg ggtaccggcg tgatggatgg caaatcttac
     5461 cgcaaacagc ccattatgat taccgcacct gacaaccaaa tcgtcttcaa agactgttcc
     5521 ccacgttaat caggcaacaa aaaacagcgt tttcagaaat gaaaacgctg tttttttgac
     5581 cgttccatta ttcgcaaaag ggaaaaaacg attacctgcc ccgtgtatca aaacctgccc
     5641 tgccggatga agggcataac cggcagggac ggcatcaaca ccatatgggg gtacggcttt
     5701 tcttgaaaga ttcggcttaa atatccaaca ctttcgcggt ataggcgata atttcatccg
     5761 ccctttcggg gttttcgttc aacttgatgc cgtaacccgg taccagctct ttcagacggc
     5821 cttcccaaga cggggcgcgc tcggggaagc attggtgcat cagccggatc atcagcggca
     5881 cagcagtcga tgcgcccggc gacgcgccca gcaatgcggc gagtgagccg tcggcgtggg
     5941 cgacaatctc cgtaccaaac tggagcacgc cgcctttttc ggagtctttt ttaatgattt
     6001 ggacgcgttg ccctgcggtg atgagttccc agtcgtcggg gtttgcctcg gggtagtatt
     6061 ccagcaggga ggcgaagcgt tcttctttgg ttttacgcaa ttcgcccagc aggtatttgg
     6121 tcagcggcat attcgcccag ccggcgcaca gcataggata gaggttgtcc atatggatgg
     6181 acagcggcaa atccataagc gagccttgct tgaggaagtt ggaacggaag cctgcataag
     6241 ggccgaacat aaggtggcgt ttgccgtcca cgttgcgtgt gtcgaggtgc gggacggaca
     6301 tcggcggcgc gccgacggaa gcctgcccgt acactttggc gttgtgttgt tcggcggttt
     6361 caggggtgct gttgcggaag aacaggccgg acacggggaa gccgccgtag cctttgcctt
     6421 cggggatgcc ggatttttgc agcagggtca gcgcgccgcc gcccgcgccg aggaagagga
     6481 agcgggtacg gagggtgagc tgcccgtcgg ggttgcgggt atcggcggtt ttgagcaccc
     6541 acgcgccgtc ggattcgcgt ttgatgtctt cgacgtggcg gttgaactcg gtttttacgc
     6601 ccttgccctg caaatatttc accatttggc gcgtcagccg tccgaaatcg acatccgtgc
     6661 cttcggcgga gtagttggcg gcgacgggtt ggttttcgtc ccggccgcgc atcatcagcg
     6721 gagcccaatc ggaaattttg ttccgatcgg tggaaaattc catattttca aaaagttttt
     6781 gggttttaaa cgcgtcataa cgtttttgaa gataagaaca atggtcttca ttcatcacca
     6841 aagacatatg cggcacggca ttgatgaagg aattgtcttc caacttgcct tccgcgacca
     6901 acgtcgccca aaactggcgg ctgacatgaa actgttcggc aatattgagg gcgcgcgccg
     6961 gatcgataat cccatttgca cccaacggcg catagttcaa ttcgcacagc gcggaatgcc
     7021 ccgtgccggc gttgttccac gcgtttgacg attccaacgc cacatcttcc aagcgttcaa
     7081 tcagggtgat ttcccaagac ggttcgagtt ctttgagcaa aacgcccaaa gtcgcgctca
     7141 taatgccgcc gcccaccaag acaacgtctg tcgcttcagc catggtttac tcctaaaaaa
     7201 caggcatctt ctgcccttat ggttatttgc cgtactacaa acgcctgaat cgcaaaagca
     7261 gggaaaaccg gcaatggtgt gtgtccgagt atgctgtttc ggggttggaa tgcgttgcaa
     7321 gtatggcttc cgacaccgct tcaggggctt gtaatatgtt atcgtgaatg tagtggattt
     7381 tactgggaaa tgcaaagttt ttctgtcgcc cgccaagccc gggaactgcg aaatgaaaaa
     7441 taaaaatagt tatttatcta tatatatcaa atttttaata gataaaaaac caaaattgtt
     7501 tatatattaa tttttaaaag attgtcagca tattgcgtta a
//
LOCUS       DAWGKF010000099         7528 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.099, whole genome shotgun sequence.
ACCESSION   DAWGKF010000099 DAWGKF010000000
VERSION     DAWGKF010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7528)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7528)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7528
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.099"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            26..2041
                     /locus_tag="WHR07_001430"
     CDS             26..2041
                     /locus_tag="WHR07_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEZ2130638.1"
                     /translation="MKSYPDPYRHFENLDSAETQNFAAEANAETRARFLENDKARTLS
                     DGILAQMQDTRQIPFCQEHRARMYHFHQDAEYPKGVYRVCAAATYRSGYPEWKILFSV
                     ADFDELLGDDVYLGGVSHLVEKPDRALLTLSKSGGDTAYTLEVDLEAGELVEGGFHFP
                     AGKNQVSWRDENSVWVCPAWDERQLTESGYPREVWLVERGKSFEESLPVYQIDKDAMM
                     VNAWRYLDPQGSPIDLIEASDGFYTKTYLQVSAEGEAKPLNLPNDCDVVGYLAGHLLL
                     TLRKDWNRANQSYPSGALVAVKLNRGELGAAQLLFAPDETQALESVETTKRFVVASLL
                     ENVQGRLKAWRFADGKWQEVELPRLPSGALEMTDQPWGGDVVYLAAGDFTTPLTLFAL
                     DLNVMELTVMRRQPQQFDSDGIEVRQFWVMSSDGERIPYFHVGKNAAPDTPTLVYAYG
                     GFGVPELPHYLGSIGKYWLEEGNAFVLANIRGGGEFGPRWHQAAQGISKHKSVDDLLA
                     VVRDLSERGISSPQHIGLQGGSNGGLITAAAFVREPQSIGALVCEVPLTDMIRYPLLS
                     AGSSWTDEYGNPQKYEVCKRRLGELSPYHNLSDGIDYPPALITTSLSDDRVHPAHALK
                     FYAKLRETSPQSWLYSPDGGGHTGNGTQREAADELACVLLFLKEFLG"
     gene            complement(2155..3111)
                     /locus_tag="WHR07_001431"
     CDS             complement(2155..3111)
                     /locus_tag="WHR07_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ2130639.1"
                     /translation="MNTAAIYRQYQTYVRSDKSGWALDGCSDSALIAQAKQPGLHLEM
                     CINRFDSGITLSRMRGGGTGAFPTEIHNFSHNCALFVMVSGQNRLQMGGREYRPSAGE
                     IWLVRGELADVSETLLPDNSGMCALHLDFSLEKLRRWHDEGLLDERLFSPQTIGRFAL
                     QRLAQNAAALTAAACPLLQRSFESDGFGLLADEAAALELSARLLRFTFRRHDNGYRRR
                     RIDEAADILQHEFARPLTIAEIARRVGLNECYLKRYFKAQTGETVAGCLRRLRLEHAL
                     ALIESGSTVQAAMHFCGYRHAGRFNEAFRRHYGFLPSDVKKC"
     gene            3347..4312
                     /locus_tag="WHR07_001432"
     CDS             3347..4312
                     /locus_tag="WHR07_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ2130640.1"
                     /translation="MKPRFYWAACAVLLTACSPEPAAEKTVSAASASAATLTVPTARG
                     DAVVPKNPERVAVYDWAALDTLTELGVNVGATTAPVRVDYLQPAFDKAATVGTLFEPD
                     YEALHRYNPQLVITGGPGAEAYEQLAKNATTIDLTVDNGNIRTSGEKQMETLARIFGK
                     EARAAELKAQIDALFAQTREAAKGKGRGLVLSVTGNKVSAFGTRSRLASWIHGDIGLP
                     PVDESLRNEGHGQPVSFEYIKEKNPDWIFIIDRTAAIGQEGPAAVEVLDNALVRGTNA
                     WKRKQIIVMPAANYIVAGGSRQLIQAAEQLKEAFEKAEPVAAGKE"
     gene            4856..5179
                     /locus_tag="WHR07_001433"
     CDS             4856..5179
                     /locus_tag="WHR07_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003775941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEZ2130641.1"
                     /translation="MQNETINLKQHLAAIKEYWQPEIINRHGFQFRLVKLLGDYGWHT
                     HGYSDKVLFAVEGDMAVDFADGGSMTIREGEMAVVPKSVSHRPRSENGCSLVLIELSD
                     PSEAV"
     gene            5293..7470
                     /locus_tag="WHR07_001434"
     CDS             5293..7470
                     /locus_tag="WHR07_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HEZ2130642.1"
                     /translation="MTRFKYSLLFAALLPVYAQADVSVSDDPKPQESTELPTITVTAD
                     RTASSNDGYTVSGTHTPLGLPMTLREIPQSVSVITSQQMRDQNIKTLDRALLQATGTS
                     RQIYGSDRAGYNYLFARGSRIANYQINGIPVADALADTGNANTAAYERVEVVRGVAGL
                     LDGTGEPSATVNLVRKRPTRKPLFEVRAEAGNRKHFGLDADVSGSLNTEGTLRGRLVS
                     TFGRGDSWRQRERSRDAELYGILEYDIAPQTRVHAGMDYQQAKETADAPLSYAVYDSQ
                     GYATAFGPKDNPATNWANSRHRALNLFAGIEHRFNQDWKLKAEYDYTRSRFRQPYGVA
                     GVLSIDHNTAATDLIPGYWHADPRTHSASVSLIGKYRLFGREHDLIAGINGYKYASNK
                     YGERSIIPNAIPNAYEFSRTGAYPQPASFAQTIPQYGTRRQIGGYLATRFRAADNLSL
                     ILGGRYSRYRTGSYDSRTQGMTYVSANRFTPYTGIVFDLTGNLSLYGSYSSLFVPQSQ
                     KDEHGSYLKPVTGNNLEAGIKGEWLEGRLNASAAVYRARKNNLATAAGRDLSGNTYYR
                     AANQAKTHGWEIEVGGRITPEWQIQAGYSQSKTRDQDGSRLNPDSVPERSFKLFTAYH
                     FAPEAPSGWTIGAGVRWQSETHTDPATLRIPNPAAKARAADNSRQKAYAVADIMARYR
                     FNPRAELSLNVDNLFNKHYRTQPDRHSYGALRTVNAAFTYRFK"
BASE COUNT         1683 a         2282 c         2175 g         1388 t
ORIGIN      
        1 acctgcccaa ccctcaagga ccccgatgaa atcctacccc gacccctacc gccattttga
       61 aaacctcgat tccgccgaaa cgcaaaactt cgctgctgaa gcgaatgccg aaacgcgcgc
      121 gcgtttttta gaaaacgaca aggcgcgcac gctgtcggac ggcattttgg cgcagatgca
      181 ggacacgcgg cagattccgt tttgtcagga acaccgcgcg cggatgtacc atttccatca
      241 ggacgcggag tatccgaagg gcgtgtaccg cgtgtgtgcg gcggcgacgt atcgttccgg
      301 ctatcccgag tggaaaatcc tgttttcagt ggcggatttc gacgagctgc tcggcgacga
      361 tgtgtatttg ggcggcgtgt cgcacttggt ggaaaagccc gaccgtgcgt tgttaacact
      421 gagcaaatcg ggcggcgata cggcgtacac gctggaagtg gatttggaag caggggagtt
      481 ggtagaaggc ggttttcact ttccggcagg caaaaaccaa gtgtcgtggc gcgatgaaaa
      541 cagcgtgtgg gtgtgtccgg cttgggacga acgccagttg accgaatcgg gctatccgcg
      601 tgaggtgtgg ctggtggaac gcggcaagag tttcgaggaa agcctgcctg tgtatcaaat
      661 cgataaagat gcaatgatgg tgaacgcgtg gcgttatctc gatccgcagg gttcgccgat
      721 tgatttgatt gaagcgtcgg acggttttta caccaaaacc tatttgcagg tgtcggccga
      781 aggcgaggcg aaaccgttaa acctgcccaa cgattgcgat gtggtcggct atctggcggg
      841 gcatcttttg ctgacgctgc gcaaggactg gaaccgcgcg aaccaaagct atccgagcgg
      901 tgcgctggtg gcggtgaagc tgaatcgggg tgaactcggg gcggcgcagc ttttgtttgc
      961 gcctgatgaa acgcaggcat tggaaagcgt ggaaacgacc aagcgttttg tggtggcgag
     1021 cctgctggaa aacgtacaag gccgtctgaa agcgtggcgt tttgccgacg gcaaatggca
     1081 ggaagtcgaa ctgccgcgcc tgccttcggg cgcgttggaa atgaccgacc agccttgggg
     1141 cggcgacgtg gtttaccttg ccgccggcga tttcaccaca ccgctgacgc tgtttgcgct
     1201 ggatttgaac gtgatggaac tgaccgtcat gcgccgccag ccgcagcagt tcgattcaga
     1261 cggcatcgaa gtgcggcagt tttgggtgat gtcgtccgac ggcgaacgca tcccttattt
     1321 ccacgtcggc aaaaacgccg cgcccgacac gccgacgctg gtttatgcct acggcggttt
     1381 cggcgtaccc gagctgccgc attatctggg cagcatcggc aaatactggc tggaagaggg
     1441 caacgccttc gtgttggcga acatacgcgg cggcggcgag ttcggcccgc gctggcatca
     1501 ggcggcgcag ggaatcagca aacacaaaag cgtcgatgat ttgcttgccg tcgtgcgcga
     1561 tttgtccgag cgcggcatca gttcgcccca acacatcggt ttgcagggcg gcagcaacgg
     1621 cggcctgatt accgccgccg ccttcgtgcg cgaaccgcaa agcataggcg cactggtgtg
     1681 cgaagtgccg ctgaccgaca tgatccgtta tccgctgctc tccgccggtt caagctggac
     1741 agacgaatac ggcaatccgc aaaaatacga agtctgcaaa cgccggttgg gcgaattgtc
     1801 gccgtatcac aatctttcag acggcatcga ttatccgccc gcgctcatca ccaccagcct
     1861 cagcgacgac cgcgtccatc ccgcccacgc gctcaagttt tacgccaaac tgcgcgaaac
     1921 ctcgccgcaa tcttggctct actcgcctga cggcggcggc cataccggca acggcacgca
     1981 gcgcgaagcc gccgacgaac tcgcctgcgt gttgctgttt ttgaaagagt ttttgggcta
     2041 agggcgggga gcggcactgc cgccgcgaat gaaaaaaggt cgtctgaaac tgctttttca
     2101 gacgaccttt tttaatggtt gtttcaaatc aaaatatcta tgccgccggc cccatcagca
     2161 cttcttcaca tccgaaggca aaaatccgta atgccgtctg aacgcttcgt tgaaccgtcc
     2221 cgcgtggcgg tagccgcaaa agtgcatggc ggcttggacg gtgctgccgg attcgatgag
     2281 ggcgagcgcg tgttccagcc gcaggcggcg caggcatccg gcgacggttt cgccggtttg
     2341 cgctttgaaa tagcgtttca ggtagcattc gttcagtccg acgcggcggg cgatttcggc
     2401 gatggtcagc ggacgggcga attcgtgttg caggatgtcg gcggcttcgt ctatgcgccg
     2461 acggcggtaa ccgttgtcgt ggcggcggaa ggtgaagcgc aataatcggg cggagagttc
     2521 cagcgcggcg gcttcgtcgg caagcaggcc gaagccgtcc gattcgaacg agcgttgcag
     2581 cagtgggcag gccgccgccg tcagtgccgc tgcgttttgc gccagccgtt gcagggcgaa
     2641 tcggcctatc gtttgcggcg aaaacaggcg ttcgtccagc aagccttcgt cgtgccagcg
     2701 gcgcagtttt tccagcgaaa aatccaaatg cagcgcgcac atgccgctgt tgtcgggcag
     2761 cagggtttcg gatacgtccg ccaactcgcc gcgtaccagc cagatttcgc cggcagacgg
     2821 gcggtattcc ctgccgccca tttgtaaccg gttctgcccc gacaccatga cgaacaaggc
     2881 gcagttgtgg ctgaaattgt ggatttcggt gggaaacgcg cccgttccgc cgccgcgcat
     2941 ccgcgacaag gtgatgcccg agtcgaagcg gttgatgcac atttccagat gcaaaccggg
     3001 ctgttttgcc tgcgcaatga gcgcgctgtc ggaacagccg tccaacgccc agccggattt
     3061 atcggagcgg acataggttt ggtactggcg gtagatggcg gcggtgttca tgattggata
     3121 ggaacgagtt gtctaacaaa tgaattaaat aggaattatt accaataatc aagcgcaggg
     3181 attggttgaa acggaaaagg tcgtctgaaa gggtgtttca gacgaccttt tccgtatcgg
     3241 gaatttgttt tgccgtatcg ggaattttgc gttttgcggc gtggtttctg caggttgttt
     3301 gcttaataat aaacattctt attcgtatgc aaaggaaccg cacaccgtga aaccgcgttt
     3361 ttattgggca gcctgcgccg tcctgctgac cgcctgttcg cccgaacctg ccgccgaaaa
     3421 aactgtatcc gccgcatccg catctgccgc cacactgacc gtgccgaccg cgcggggcga
     3481 tgccgttgtg ccgaagaatc ccgaacgcgt cgccgtgtac gactgggcgg cgttggatac
     3541 gctgaccgaa ttgggcgtga atgtgggcgc aaccaccgcg ccggtgcgcg tggattattt
     3601 gcagcctgca tttgacaagg cggcaacggt ggggacgctg ttcgagcccg attacgaagc
     3661 cctgcaccgc tacaatcctc agcttgtcat taccggcggg ccgggcgcgg aagcatatga
     3721 acagttggcg aaaaacgcga ccaccataga tctgacggtg gacaacggca atatccgcac
     3781 cagcggcgaa aagcagatgg agaccttggc gcggattttc ggcaaggaag cgcgcgcggc
     3841 ggaattgaag gcgcagattg acgcgctgtt cgcccaaacg cgcgaagccg ccaaaggcaa
     3901 aggacgcggg ctggtgctgt cggttacggg taacaaggtg tccgccttcg gcacgcggtc
     3961 gcggttggca agttggatac acggcgacat cggcctaccg cctgtagacg aatctttacg
     4021 caacgagggg cacgggcagc ctgtttcctt cgaatacatc aaagagaaaa accccgattg
     4081 gattttcatc atcgaccgta ccgccgccat cgggcaggaa gggccggcgg ctgtcgaagt
     4141 attggataac gcgctggtac gcggcacgaa cgcttggaag cgcaagcaaa tcatcgtcat
     4201 gcctgccgcg aactacattg tcgcgggcgg ctcgcggcag ttgattcagg cggcggagca
     4261 gttgaaggag gcgtttgaaa aggcagaacc cgttgcggcg gggaaagagt agggagtcgt
     4321 ctgaaaacgg agtttccgaa ggaagcgggg ggtttctgcg aagctaaagt gcggtttcaa
     4381 cgaattgaaa agcagcctgt atgttgaaaa taccgctcaa gcaaacctac ggtttgccgc
     4441 cctctcccta tccctctccc acagggagag gggattgggg tgcaggctgc ctttaaggtt
     4501 taggcaaatt tttaacttcg ttgaagctgc gatttcagaa gctccgtttt agcttcgcag
     4561 aaactccgct tccttcgaaa gctccgtttt cagacgacct tttggagtac cgcaggcaca
     4621 cgcatcgaac ggctgaatca aagttcagac cgatggcagc ccgcacccga gtttatgcgg
     4681 caaacagcga ggctacggca acccgtcccc tctccctgtg ggagagggtt agggagaggg
     4741 cggtaagccg caggcttaca tcaaagccga taacgcttcc gttacaactc cgcccactga
     4801 acgaagccaa aacgacaaac cgcatcgtaa accacccaac ccataggaga accccatgca
     4861 aaacgaaacc atcaacctga aacagcacct tgccgccatc aaagaatact ggcagcccga
     4921 aatcatcaac cgccacgggt tccaattccg tttggtcaaa cttttgggcg attacggctg
     4981 gcatacgcac ggatacagcg acaaagtgct gtttgccgtg gagggcgaca tggcggtgga
     5041 cttcgccgac ggcggcagca tgacgatacg cgagggcgag atggcggtcg tgccgaagtc
     5101 ggtgtcgcac cgcccgcgtt cggaaaacgg ctgctcgttg gtgctgattg agttgtccga
     5161 cccgtccgag gccgtctgaa aacgaagttt ccgaaggaag ctgagtttct gcgaagctaa
     5221 aagcagcctg caccttcaat caatatgccg aaaatacaac cccaccgcac accaacacac
     5281 aaaggaaatc ccatgacacg cttcaaatat tccctgctgt ttgccgccct gttgcccgtg
     5341 tacgcgcagg ccgatgtttc tgtttcagac gaccccaaac cgcaggaaag cactgaattg
     5401 ccgaccatca ccgttaccgc cgaccgcacc gcgagttcca acgacggcta cactgtttcc
     5461 ggcacgcaca ccccgctcgg gctgcccatg accctgcgcg aaatcccgca gagcgtcagc
     5521 gtcatcacat cgcaacaaat gcgcgaccaa aacatcaaaa cgctcgaccg cgccctgttg
     5581 caggcgaccg gcaccagccg ccagatttac ggctccgacc gcgcgggcta caactacctg
     5641 ttcgcgcgcg gcagccgcat cgccaactac caaatcaacg gcatccccgt tgccgacgcg
     5701 ctggccgata cgggcaatgc caacaccgcc gcctatgagc gcgtagaagt cgtgcgcggc
     5761 gtggcggggc tgctggacgg cacgggcgag ccttccgcca ccgtcaatct ggtgcgcaaa
     5821 cgcccgaccc gcaagccatt gtttgaagtc cgcgccgaag cgggcaaccg caaacatttc
     5881 gggctggacg cggacgtatc gggcagcctg aacaccgaag gcacgctgcg cggccgcctg
     5941 gtttccacct tcggacgcgg cgactcgtgg cggcagcgcg aacgcagccg cgatgccgaa
     6001 ctctacggca ttttggaata cgacatcgca ccgcaaaccc gcgtccacgc aggcatggac
     6061 taccagcagg cgaaagaaac cgccgacgcg ccgctcagct acgccgtgta cgacagccaa
     6121 ggttatgcca ccgccttcgg cccgaaagac aaccccgcca caaattgggc gaacagccgc
     6181 caccgtgcgc tcaacctgtt tgccggcatc gaacaccgct tcaaccaaga ctggaaactc
     6241 aaagccgaat acgactacac ccgcagccgc ttccgccagc cctacggcgt agcaggcgtg
     6301 ctttccatcg accacaacac cgccgccacc gacctgattc ccggttattg gcacgccgac
     6361 ccgcgcaccc acagcgccag cgtgtcattg atcggcaaat accgcctgtt cggccgcgaa
     6421 cacgatttaa tcgcgggtat caacggttac aaatacgcca gcaacaaata cggcgaacgc
     6481 agcatcatcc ccaacgccat tcccaacgcc tacgaatttt cccgcacggg cgcctatccg
     6541 cagcctgcat cgtttgccca aaccatcccg caatacggca ccaggcggca aatcggcggc
     6601 tatctcgcca cccgtttccg cgccgccgac aacctttcgt tgatactcgg cggcagatac
     6661 agccgttacc gcaccggcag ctacgacagc cgcacacaag gcatgaccta tgtatccgcc
     6721 aaccgtttca ccccctacac aggcatcgtg ttcgacctga ccggcaacct gtcgctttac
     6781 ggctcgtaca gcagcctgtt cgtcccgcaa tcgcaaaaag acgaacacgg cagctacctg
     6841 aaacccgtaa ccggcaacaa tctggaagcc ggcatcaaag gcgaatggct tgaaggccgt
     6901 ctgaacgcat ccgccgccgt gtaccgcgcc cgtaaaaaca acctcgccac cgcagcagga
     6961 cgcgacctga gcggcaacac ctactaccgc gccgccaacc aagccaaaac ccacggctgg
     7021 gaaatcgaag tcggcggccg catcactccc gaatggcaga tacaggcagg ttacagccaa
     7081 agcaaaaccc gcgaccaaga cggcagccgc ctgaaccccg acagcgtacc cgaacgcagc
     7141 ttcaaactct tcactgccta ccactttgcc cccgaagccc ccagcggctg gaccatcggc
     7201 gcaggcgtgc gctggcagag cgaaacccac accgaccctg ccacgctccg catccccaac
     7261 cccgccgcca aagcccgcgc cgccgacaac agccgccaaa aagcctacgc cgtcgccgac
     7321 atcatggcgc gttaccgctt caatccgcgc gccgaactgt cgctgaacgt ggacaacctg
     7381 ttcaacaaac actaccgcac ccagcctgac cgccacagtt acggcgcact gcggacagtg
     7441 aacgcggcgt ttacctatcg gtttaaataa ggtcgtctga aaacggagtt tctgcgaagc
     7501 tatagtggat taacaaaaac cagtacgg
//
LOCUS       DAWGKF010000100         7464 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.100, whole genome shotgun sequence.
ACCESSION   DAWGKF010000100 DAWGKF010000000
VERSION     DAWGKF010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7464)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7464)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7464
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.100"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(5..760)
                     /locus_tag="WHR07_001435"
     CDS             complement(5..760)
                     /locus_tag="WHR07_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HEZ2130643.1"
                     /translation="MKFARLLFLCAALAGTQAAAAEMVQIEGGSYRPLYLKKDTGLIK
                     VKPFKLDKYPVTNAEFAEFVNSHPQWQKGRIGSKQAEPAYLKHWMKNGSRSYAPKAGE
                     LKQPVTNVSWFAANAYCAAQGKRLPTIDEWEFAGLASATQKNGSNEPGYNRTILDWYA
                     DGGRKGLHDVGKGRPNYWGVYDMHGLIWEWTEDFNSSLLSSGNANAQMFCSGASIGSS
                     DSSNYAAFLRYGIRTSLQSKYVLHNLGFRCTSR"
     gene            complement(887..2043)
                     /gene="nirK"
                     /locus_tag="WHR07_001436"
                     /pseudo
     CDS             complement(887..2043)
                     /gene="nirK"
                     /locus_tag="WHR07_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714409.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase, copper-containing"
     gene            2414..4669
                     /locus_tag="WHR07_001437"
     CDS             2414..4669
                     /locus_tag="WHR07_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric-oxide reductase large subunit"
                     /protein_id="HEZ2130644.1"
                     /translation="MGQYKKLWYLLFAVLAVCFTILGYMGSEVYKKAPPYPEQVVSAS
                     GKVLMTKDDILAGQSAWQSTGGMEVGSILGHGAYQAPDWTADWLHRELSAWLDLTAQQ
                     TYGKKFDEVSPEEQAVLKTRLADEYRNQSRIKEDGSVVISDTRVKAIESILPYYHGVY
                     GDDPALQTTREHFAMKNNTLPSQEAREKLFDFFFWTSWSASTNRPDETFTYTNNWPHE
                     PLINNVPTTENYMWSFTSVVLLLMGIGLLMWGYSFLTKHEEVEVPSEDPISKIQLTPS
                     QKALGKYVFLTVALFVVQVLLGGLTAHYTVEGQGFYGIDEALGFEMSDWFPYALTRTW
                     HIQSAIFWIATGFLTAGLFLAPIVNGGKDPKFQRAGVNFLYIALFIVVGGSYAGNFFA
                     LTHILPPEFNFWFGHQGYEYLDLGRFWQLLLMVGLLLWLFLMLRCTVSAFKEKGVDKN
                     LLAIFVASMVGVGVFYAPGLFYGEKSPIAVMEYWRWWVVHLWVEGFFEVFATAAFAFV
                     FYNMGFVRRSTATASTLAAAAIFMLGGVPGTLHHLYFSGSTSASMAIGACFSALEVVP
                     LVLLGREAYEHWSYQHLSDWAKRLRWPLMCFVAVAFWNMIGAGVFGFLINPPISLFYI
                     QGLNTSAVHAHAALFGVYGFLALGFVLLVARYLKPNAQFDDKLMTWGFWLLNGGLVGM
                     IAISLLPVGVIQAYASITHGLWYARSEEFLQMEILDTLRWVRTAADLVFIGGAICVAI
                     QATKIVFGRDK"
     gene            4848..5381
                     /locus_tag="WHR07_001438"
     CDS             4848..5381
                     /locus_tag="WHR07_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HEZ2130645.1"
                     /translation="MGIYDFQMKDAEGNAVDLSGYRGKVLLIVNTATRCGLTPQYEAL
                     QKLYAQYTAEGLEILDFPCNQFREQAPESSGEIAQVCMMKFGTKFKIFDKIEVNGANT
                     APLYAYLKSVKPQDKGNHLFKDFVLKLAALGEKRDEGDIKWNFTKFLVNRDGEVVERF
                     APSVTPEEIEADIRALL"
     gene            complement(5444..6628)
                     /locus_tag="WHR07_001439"
     CDS             complement(5444..6628)
                     /locus_tag="WHR07_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HEZ2130646.1"
                     /translation="MTEPTSRRRFLKTCTAAAGAGLLQACGTSATSVPPLPSSHSVVK
                     ARTVPLQTPRRQSSDGNLLRVVASSGFAEDTNRVNTALTRLYNAGFTVTNQQAGSRRF
                     QRFAGTDAQRVADFQEVASGRVATPKVLMGLRGGYGAARILPHIDFASLGARMREHGT
                     LFFGFSDVCAVQLALLAKGNMMSFAGPMAYSDFGKPAPGAFTMDAFIKGATQNRLTVD
                     VPYIQRADVETEGILWGGNLSVLASLAGTPYMPDIDGGILFLEDVGEQPYRIERMLNT
                     LYLSGILKKQRAIVFGNFRMEKIRDVYDPSYDFSAVANHVSRTAKIPVLTGFPFGHIA
                     DKITFPLGAHARIRMNGNSGYSVAFEGYPTLDASALTLDTLLPPPDLPIFPESGVADI
                     SE"
     gene            complement(6668..7072)
                     /locus_tag="WHR07_001440"
     CDS             complement(6668..7072)
                     /locus_tag="WHR07_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HEZ2130647.1"
                     /translation="MTAQPCPICTAQDEDILLQTPKLRVIAVHNDSGSPAFCRVIWRK
                     HIAEMTDLSAAERGELMEMVYKVEAAMRQVFQPAKINLASLGNVVPHLHWHIIARFEN
                     DASFPAPIWANPVRKHGMTLPQDWTEQLKKLL"
BASE COUNT         1654 a         1811 c         2086 g         1913 t
ORIGIN      
        1 ggggttatcg gcttgtgcaa cggaagccca agttgtgcaa gacatatttg gattgcaggc
       61 tggtacggat gccgtagcgg aggaaggcgg catagttgga cgagtcgctc gacccgatag
      121 acgcgccgct gcaaaacatt tgcgcgttgg cattgccgga agaaagcagg ctgctgttga
      181 aatcttccgt ccattcccaa atcagcccgt gcatatcata aacgccccag tagttcgggc
      241 ggcctttgcc gacatcgtgc aggcctttcc gtccgccgtc ggcataccaa tcgagaatag
      301 tgcggttgta gccgggttcg tttgagccgt ttttctgcgt ggcggaagca agtccggcaa
      361 attcccattc gtcaatggtc ggcaggcgtt tgccttgtgc ggcgcaatag gcgttggcgg
      421 caaaccagga aacattggtt accggttgtt ttaattcgcc cgccttcggc gcatagctgc
      481 ggctgccgtt tttcatccaa tgcttcaggt aagcgggttc tgcctgtttg gaaccgatcc
      541 tgcctttttg ccattggggg tggctgttga caaattcggc aaactcggca ttggtaacgg
      601 gatatttatc cagtttgaac ggtttgactt taatcaggcc ggtatctttt ttcagataaa
      661 gcgggcggta gctgccgcct tcgatttgaa ccatttcggc agctgccgct tgagtgccgg
      721 cgagtgccgc acagagaaag agtaaccggg caaacttcat atcatgcctc ctgacaggca
      781 gttaaaatca atcttccgaa aggaaagatt ggttgttaaa aaaccactgc cgtgcgtaat
      841 gaagtacggc ggcagtggtt cgtttgccta aaaatgggtg ttcaatttag taatcgcttt
      901 ttgcaggagc agaggctgca ggagcagaag ctgcgggagc ggaagcagca ggagctgcac
      961 cgttaccggc gtaagcggta tcactcaatt tttgagtcat gatttcaggg ttttctgcac
     1021 cttctacttt caattgaccc agtgcgcctt tgttgaatgc gcggaagata gagtggtcaa
     1081 ccaaagtgta gctgcccggg atgtcgactt tgaattcgac gatggcagag ccgccggcag
     1141 gaacgatggt actttgtacg ttttcgttaa tcagtttgcc gccttcaaca taaactttgt
     1201 cgaagatttc accgattacg tggaaggaag acaccaagtt cgggccgccg ttaccgacgt
     1261 acatacgcac ggtttcgcct gctttggctt tcagcgcgtt atcgccggcg atagaaccta
     1321 catgaccgtt gaatacgacg tattcaggct gttcggcaac ggctttgtcc atatcgaacg
     1381 gcaggccttg cgcgcctttt ttgcctttgg tgtagaagtc gccttggatg atgtagaact
     1441 ctttatccac tttcggcaga ccttctttag gctcgaccaa aatcagaccg tacataccgt
     1501 tggcgatgtg cataccgacc ggcgcgacgg tgcagtggta gatgtacaga cccggttgca
     1561 gggctttgaa gctgaatgtg gaagtgcgac ccggggcggt aaaggttgcg gctgcaccgc
     1621 cgccctgacc ggttgcggcg tggaagtcga cgttatgggg aacggtagaa gacgggttgt
     1681 tggaaaattc cacttcaacc gtatcgcttt cgcgtacgcg gatcatgcgg cccggaacgt
     1741 cgccgtcaaa tgtccagtag cggtattcca caccgtcttc catggtcatg gtttttcgac
     1801 agtttccatt tttacgcgga ctttggcagg atagtcgcgg tcgattgcgg gaggtacttc
     1861 aggagcgtgg gtggtaactg catcgataac gggcagttcg cctgtcggcg tttcggcggc
     1921 ggtttgtgcg gcggaacttg cggcttctgc ggaagcggca ggggcttgcg cggcaggttc
     1981 gcctccgcag gcggctaatg cgaataagga agcaatcatt gcagctaagg cttggcgttt
     2041 cataatgttt tccttttgta agaaaagtag aggaattggt taagaacttg gtgtgattat
     2101 gcgtttgccc cattgggggc attttgattt aagtcaaata attcataaaa tatgaactta
     2161 aaatgatact tctaatactt tatagctact aaaaattaca atgaataggc tgatttgctt
     2221 aaggacttcg gcaaatcagg caaaggcagg gtagttgccg actaaagaat aatgatagtt
     2281 attatcatat atgtatttgt tttatatgtg agtttctttg aacaaatgtt tatttgtgcg
     2341 gtaaaccgtg ctacaatctt taacattcat attttgtgaa ttttaatcca ctatattaaa
     2401 aggagctctc aaaatgggac agtacaagaa gctgtggtac ttgctgtttg ccgttctggc
     2461 ggtatgcttt accattcttg gctatatggg cagcgaggtt tataagaaag ccccgcctta
     2521 ccccgaacag gtcgtttccg catcaggcaa agtgctgatg acgaaagacg atattttggc
     2581 aggtcagtct gcgtggcaga gtaccggcgg tatggaagtc ggttcgattc tgggtcacgg
     2641 cgcatatcag gctccggact ggacggcgga ctggctgcat cgtgagttgt ccgcttggtt
     2701 ggatttgacc gcgcaacaga cttacggcaa aaaattcgat gaagtttccc ctgaagaaca
     2761 agccgttctg aaaacccgac tggctgacga ataccgcaac caaagccgta ttaaagaaga
     2821 cggcagcgtc gtcatcagcg atacgcgcgt gaaagccatc gaaagcatcc tgccttatta
     2881 ccacggtgtt tacggcgatg atcccgcgct gcaaaccacc cgcgaacact ttgcaatgaa
     2941 aaacaacaca ttgccaagcc aagaagcgcg tgaaaaactg ttcgacttct tcttctggac
     3001 ttcttggtct gcttcgacca accgtcctga cgagacgttc acttatacca acaactggcc
     3061 gcacgagcct ttgatcaaca acgtaccgac cactgaaaac tatatgtggt cattcaccag
     3121 cgttgttctt ctgctgatgg gcatcggttt gctgatgtgg ggttattcct tcttgaccaa
     3181 acacgaggaa gtggaagtgc cgtctgaaga cccgatttcc aaaatccaac tgaccccttc
     3241 gcaaaaagca ttgggcaaat acgtcttcct gacggtcgcc ctgtttgtgg tacaagtatt
     3301 gctgggcgga ctgaccgcgc actacaccgt cgaaggccag ggtttctacg gcatcgacga
     3361 agcgttgggc tttgaaatgt ccgactggtt cccttatgcc ctgacccgta cttggcacat
     3421 ccaatcagcc atcttctgga ttgcaaccgg ctttttgacg gcaggtttgt tcctcgcgcc
     3481 gattgtcaac ggcggtaaag atcccaagtt ccaacgtgcc ggcgtaaact tcctctatat
     3541 cgccctcttc atcgtggtcg gcggttctta cgcgggcaac ttcttcgcgt tgacgcacat
     3601 ccttcccccg gaatttaact tctggttcgg acaccaaggt tacgaatacc tcgatttggg
     3661 acgtttctgg caactcctgc tgatggtcgg cctgctgttg tggctgttcc tgatgttgcg
     3721 ttgcacggtt tccgccttca aagaaaaagg cgtggacaaa aacctgctgg caatctttgt
     3781 cgcttctatg gtcggtgtgg gcgtattcta cgcaccggga ctgttctatg gcgagaaatc
     3841 cccgattgcc gtaatggaat actggcgttg gtgggtggtt cacctgtggg tggaaggctt
     3901 ctttgaagta tttgccactg ccgccttcgc atttgtcttc tacaatatgg gctttgtccg
     3961 ccgcagtacc gccacagctt ctactctggc cgctgccgcc atctttatgt tgggcggcgt
     4021 tccgggtacg ctgcaccacc tgtacttctc cggctctacc tccgcctcta tggcaatcgg
     4081 tgcctgcttc tccgctttgg aagtcgtgcc gctggtgttg ctgggccgtg aagcatacga
     4141 gcattggtct taccaacacc tgtccgactg ggcgaaacgc ctgcgttggc cgctgatgtg
     4201 cttcgtggca gtcgcctttt ggaatatgat cggtgccggt gtattcggtt tcctgattaa
     4261 cccgccgatt tccctgttct atatccaagg tttgaatact tctgctgttc atgcgcacgc
     4321 cgccttgttc ggtgtgtacg gtttcttggc attgggcttc gtattgctgg ttgcccgtta
     4381 tttgaaaccg aacgcgcagt ttgacgacaa actgatgact tggggcttct ggctgctcaa
     4441 cggcggcttg gtcggtatga ttgccatcag cctgttgccg gttggcgtga ttcaggcata
     4501 cgcctccatc acgcacggcc tgtggtatgc acgcagcgaa gagttcctgc aaatggaaat
     4561 cctcgacacc ttgcgttggg tacgtacggc agctgacttg gtctttatcg gcggtgcaat
     4621 ctgcgttgcc atccaagcca ctaaaatcgt attcggccgc gacaaataag ttttgcggta
     4681 tgaaatgagc aactgcaccc gttttcgggt gcagtttttt attgcggatt gggacgggaa
     4741 tggaaaagga tgtggatttt ttattttaat cggctataca attgctgctt tcatgccgtc
     4801 tgaagcacgt ttcagatggc atcggtttac atcagataag gataaaaatg ggtatttacg
     4861 attttcaaat gaaagatgcg gaaggcaatg cggttgattt gtcaggctat cgcggcaagg
     4921 ttctgctgat tgtcaacacg gcaacgcgtt gcggtctgac cccgcaatac gaggctttgc
     4981 agaagctgta tgcacaatat accgcagaag gcttggagat tttggatttt ccgtgcaacc
     5041 agttccgcga acaggctccc gaaagcagcg gagaaattgc ccaagtgtgt atgatgaagt
     5101 ttggcacgaa gtttaagatt ttcgacaaaa tcgaagtcaa tggagcaaat accgcgccct
     5161 tgtatgccta cctgaaatcc gtcaaaccgc aagataaagg caatcatctg tttaaagatt
     5221 tcgtgttgaa gctcgcagct ttgggagaga agcgcgacga aggcgacatc aaatggaact
     5281 ttaccaaatt cctcgtcaac cgcgacggcg aagtggtcga gcgttttgcg cctagtgtta
     5341 cgcccgaaga aatcgaagcc gatattcggg cattgctgta atctgccgcc gtcttgggaa
     5401 atgccgtctg aaggcttcag acggcatttg tccgtttgcg ggtttattcc gaaatatcgg
     5461 caacaccgct ttcggggaag atgggcaaat ccggcggtgg gagcagggta tccaaagtca
     5521 gggcggacgc atcgagtgtg gggtagcctt caaacgcgac cgaataaccg ctgtttccgt
     5581 tcatacggat tcgggcgtgc gcgcccagag ggaaagtgat tttgtcggca atgtgcccga
     5641 agggaaagcc cgtcagcacg gggattttcg ccgtgcgcga aacatggttg gcaacggcgg
     5701 aaaaatcata agacggatca tagacatctc gaattttttc catacggaaa ttgccgaaca
     5761 cgatggcgcg ctgtttcttc aaaatacccg aaagatacag cgtattgagc atacgttcga
     5821 tgcggtaggg ctgttcgccg acatcttcga ggaacaaaat gccgccgtcg atgtcgggca
     5881 tataaggcgt gccggcgagc gaggcgagga cgcttaagtt gccgccccac aatatgcctt
     5941 cggtttcgac atcggcgcgt tggatataag gaacatcaac ggtcaggcgg ttttgggttg
     6001 cacccttgat aaaggcatcc atcgtaaacg caccgggggc gggtttgcca aaatcgctat
     6061 aagccatcgg gccggcaaaa ctcatcatat tgccttttgc caacaatgcc agctggacgg
     6121 cgcatacgtc gctgaatccg aaaaacagcg tgccgtgttc gcgcatcctt gcgccgagcg
     6181 aagcaaaatc gatatgcggc agaatccgcg ccgcaccgta accgccgcgc aagcccatca
     6241 gcactttagg cgtggcgacg cggccggaag cgacctcttg gaaatcggcg acacgttgtg
     6301 cgtccgtacc agcaaaccgt tggaagcggc ggctgcccgc ctgttggttg gttacggtaa
     6361 aaccggcatt gtaaaggcgg gttaaggctg tgttgacgcg gttggtgtct tcggcaaagc
     6421 ctgacgaagc gacaacgcgc agaaggttgc cgtccgaact ttgacggcgt ggcgtttgga
     6481 gaggcacggt tcgggctttc acaacagaat gggaagaggg aaggggcgga acggatgtgg
     6541 cggatgtgcc gcaagcctga agcagtcccg cgccggcggc ggcggtgcag gttttcagaa
     6601 aacgacggcg ggaggtcggt tcggtcataa tttccctttc atacggtttc agacggcatc
     6661 ggcgggctta aagcagcttt ttaagctgtt ccgtccaatc ttgcggcagg gtcataccgt
     6721 gttttcggac ggggtttgcc caaatcggcg cagggaagga cgcatcgttt tcaaagcggg
     6781 cgataatatg ccaatgcagg tgcggcacga cattgcccaa gctggcgagg ttaatcttgg
     6841 caggttgaaa cacttggcgc atagcggctt cgactttgta caccatttcc atcaattcgc
     6901 cgcgttccgc tgccgaaagg tcggtcattt cggcaatatg cttacgccaa atgacgcggc
     6961 agaatgcagg cgaaccgctg tcgttatgga cggcgatgac gcgcagcttg ggggtttgca
     7021 gcaaaatatc ttcatcttgt gccgtgcaga tggggcaggg ttgggcggtc atttttcctt
     7081 attcctgaaa gtgtttaaaa aacggtaggg taatttttaa tatttcaatc tgtctgtccg
     7141 cattgccgtt aattgtacca cttcataggg cggtgctcta tgtgtcgtcc tgtgtgttga
     7201 aacatatcgg acgcgtttga acagttgtgc ggcaaactgt tttagcggca ggcaagagat
     7261 gccgtctgaa gcccattgtc cgtcattccc acacaggcag ttgctacggt tgctgaagcc
     7321 ccttagccgt cgcgcaggcg gttgctacgg ttactaaaat cccgtcattc ccgcgcaggc
     7381 gggaatccag tccgttcggt ttcagttgtt tctgataaat cttgcagcgt tgggttttta
     7441 gattcccgct ttcgcgggaa tgac
//
LOCUS       DAWGKF010000101         7403 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.101, whole genome shotgun sequence.
ACCESSION   DAWGKF010000101 DAWGKF010000000
VERSION     DAWGKF010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7403
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.101"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(151..573)
                     /locus_tag="WHR07_001441"
     CDS             complement(151..573)
                     /locus_tag="WHR07_001441"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HEZ2130648.1"
                     /translation="MSIMQVEVVSSEQNIYSGEASFVVVPTVQGELGIYPRHEPIMSL
                     VRPGALRLTVPGEDKEVLVAVSGGVLEVQPDKVTVLADVAVRSAEMDQARAEEAKKAA
                     EAGISQAKDDKALAEAHKALAAAIAQLKTLDYIRSHKK"
     gene            complement(584..1981)
                     /gene="atpD"
                     /locus_tag="WHR07_001442"
     CDS             complement(584..1981)
                     /gene="atpD"
                     /locus_tag="WHR07_001442"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEZ2130649.1"
                     /translation="MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTLEVQQL
                     LGDGVVRTIAMGSSDGLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDT
                     DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMME
                     LINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRV
                     ALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTL
                     AEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLG
                     IYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDIIAILGMDELSDEDK
                     LTVMRARKIQRFLSQPFHVAEVFTGSPGKYVALRDTIAGFKAILNGEYDHLPEQAFYM
                     VGSIEEAVEKAKTLN"
     gene            complement(2019..2894)
                     /gene="atpG"
                     /locus_tag="WHR07_001443"
     CDS             complement(2019..2894)
                     /gene="atpG"
                     /locus_tag="WHR07_001443"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEZ2130650.1"
                     /translation="MAVGKEILTKIRSVQNTQKITKAMQMVSTSKMRKTQERMRLARP
                     YAEKVRMVMSHLAQTNTDHGIPLLESHREIRRVGFILITSDKGLCGGLNANVLKKFLA
                     QVQEYQNQGIEEEIVCLGSKGLMACQSIGLNVVASAVNLGDTPKMEMLLGPLTELFQR
                     YEKHEIDRIHLVYSGFVNTMRQEPRMEVLLPIGENVIGDSAPKSPFSWEYRYEPTALA
                     VLEYLVRRYLESVVYQALSDNMASEQAARMVAMKAATDNAGNAIKELRLVYNKSRQAA
                     ITTELSEIVAGAAAV"
     gene            complement(2919..4466)
                     /locus_tag="WHR07_001444"
     CDS             complement(2919..4466)
                     /locus_tag="WHR07_001444"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEZ2130651.1"
                     /translation="MQLNPAEISDLIKAKIENLSVNAEVRTRGTVISVTDGIVRIHGL
                     SDAMQGEMLEFPGNTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRE
                     LVGRVVDALGRPIDGKGPINTTLTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVG
                     RGQRELIIGDRQTGKTAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAM
                     EHTIVVAATASEAAALQYIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLL
                     LRRPPGREAYPGDVFYLHSRLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGG
                     IRLALAQYRELAAFSQFASDLDEATRKQLEHGEVVTELMKQKQFSTLNTAEMALTLWA
                     INNGSYSDVPVAKALAFESEFLSFVRTQHPEVLEAVNASGAMSDESEKTLEAAMKSFK
                     SSYAYQA"
     gene            complement(4477..5010)
                     /locus_tag="WHR07_001445"
     CDS             complement(4477..5010)
                     /locus_tag="WHR07_001445"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEZ2130652.1"
                     /translation="MAEFATIARPYAKALFGLAQEKSQIESWLGGLEKLAAVVQEGKV
                     ASLIDRPETNASEKADILIDLVGLKDKELKNFVIVLAGQKRLSILPEVYAQYQDLTLS
                     FNHIKSAVIYSAYPLTDKQVGELAQMLNKRFDSELKISVEIEPELIGGIKVEVGDQVL
                     DLSVQGKLSALYTTMTN"
     gene            complement(5015..5485)
                     /locus_tag="WHR07_001446"
     CDS             complement(5015..5485)
                     /locus_tag="WHR07_001446"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HEZ2130653.1"
                     /translation="MNINATLFAQIIVFFGLVWFTMKFVWPPIAKALDERAAKVAEGL
                     AAAERGKSDFEQAEKKVAELLAEGRNQVSEMVANAEKRAAKIVEEAKEQASSEAARIA
                     AQAKADVEQELFRARESLREQVAVLAVKGAESILRSEVDASKHAKLLDTLKQEL"
     gene            complement(5556..5792)
                     /gene="atpE"
                     /locus_tag="WHR07_001447"
     CDS             complement(5556..5792)
                     /gene="atpE"
                     /locus_tag="WHR07_001447"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HEZ2130654.1"
                     /translation="MGLIAIACGLIVALGALGASIGIAMVGSKYLESSARQPELIGPL
                     QTKLFLIAGLIDAAFLIGVAIALLFAFVNPFAGA"
     gene            complement(5849..6715)
                     /gene="atpB"
                     /locus_tag="WHR07_001448"
     CDS             complement(5849..6715)
                     /gene="atpB"
                     /locus_tag="WHR07_001448"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEZ2130655.1"
                     /translation="MAGETITAADYIKHHLQSLTSLSDVTQGQGLKNIADFSFINLDA
                     VFFAVLLGVIGSFLLWRGAKKATAGVPGRFQAAVEILFEFVDDMCKSIIHNEKSRKAV
                     APLGLTLFVWIFLMNAMDMLPVDLLPMVWQGITGNHHALLRVVPTADLNTTLALAVGV
                     LLICIYYNIKIKGLGGWFHELFSAPFGAKLAPANFLLNLVEFLSKTVSHGMRLFGNMY
                     AGELVFLLIALLGGAWAAFGSVEVMDPILFVFHIIAGLAWAIFHILVITLQAFIFMAL
                     AFVYIGQAHDAH"
     gene            complement(6705..7058)
                     /locus_tag="WHR07_001449"
     CDS             complement(6705..7058)
                     /locus_tag="WHR07_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit I"
                     /protein_id="HEZ2130656.1"
                     /translation="MKQIIILQSAVLSICAAVAFAVWGFAGFLSAVGGGLSYLLPTFV
                     AVLLLKLFRGNPFLQSRMFVFGEILKVVLSLLSMLAVFAVWHQSLVFAPFLMGLLGVS
                     HLVFLVLLRVKDYGR"
BASE COUNT         1949 a         1971 c         1679 g         1804 t
ORIGIN      
        1 ctatatgttt cggttaggcg gcaggctgcc ctattgaata ccttaaagca ggctatgcct
       61 gccaacgcca tatccaaaca cagtctttaa tttaaatccg gaaaataaaa agcacgacca
      121 aacggtcgtg cttttccaaa ccaaacaagt ttatttcttg tgcgaacgga tatagtccaa
      181 agttttgagc tgtgcaatcg cagcagccaa tgctttatgc gcctccgcca aagccttatc
      241 gtctttagct tgggaaatgc ccgcttctgc ggcttttttc gcctcttccg cacgtgcctg
      301 atccatctcc gcactgcgga cggcaacatc cgccaagaca gttactttat caggctgtac
      361 ttccaaaaca ccgccggaaa cagcaaccaa aacctcttta tcctcgcccg gaacggtcaa
      421 acgcaaagcc cccggccgca ccaaactcat aatcggctcg tgtcgcgggt aaataccaag
      481 ctcaccttga acggtcggaa ccactacaaa gctggcttcg cccgaataga tgttttgctc
      541 gctactgacc acctcaactt gcatgatgct catgccgacc tcctcagttt aaggttttcg
      601 ctttctcaac cgcttcttcg atgctgccga ccatgtagaa tgcctgttcg ggcagatgat
      661 cgtattcgcc gttcaagatg gctttgaagc cggcaatggt atcgcgcagg gcgacatatt
      721 tgcccggaga acctgtaaac acttcggcaa cgtggaacgg ttgggacagg aagcgttgga
      781 ttttacgcgc acgcattacg gtcagtttgt cttcgtcaga caattcgtcc atacccaaga
      841 tggcgatgat gtcgcgcaat tctttgtatt tctgcagggt ggactgtacg ccgcgcgcca
      901 cgtcgtagtg ctcttgaccc aagaccatcg gatccagttg gcgcgaagtg gaatcaagcg
      961 gatcgactgc cgggtaaata cccaaagagg caatatcgcg gctcaatacg acggttgcgt
     1021 ccaagtgggc gaacgttgtt gccggagacg ggtcggtcaa gtcgtccgca ggtacatata
     1081 cggcttggat agaagtaata gaaccggttt gggtagaggt aatacgctcc tgcaaacgac
     1141 ccatttcttc tgccaatgtc ggttggtagc ccactgcaga cggcatacgg cccaacaatg
     1201 cggatacttc ggtaccagcc agagtgtaac ggtagatgtt gtccacgaag aacaatacgt
     1261 cgcggccttt gccgttttcg tctttttcgt cacggaagta ttccgccatg gtcaaaccgg
     1321 tcaatgcgac gcgcaaacgg ttgcccggag gttcgttcat ctgaccgtaa accattgcca
     1381 ctttatccaa tacgttggaa tctttcatct cgtggtagaa gtcgttacct tcgcgggtac
     1441 gctcacccac gcctgcgaac acggacaagc cgctgtgcgc tttggcgatg ttgttgatca
     1501 attccatcat gttcacggtt ttacccacac cggcaccgcc gaacagacct actttaccgc
     1561 ctttggcaaa cggacacagc aagtcaatca ctttaatgcc cgtttcgagc aattcggttg
     1621 tggaagacag ttcgtcaaac ttaggagcgg cttggtggat ggcacggctc ttgtcggtat
     1681 cgattggacc tgcctcgtca acaggcgtac ccaatacgtc gacaatacga cccaatgtac
     1741 ctttacctac cggcacagta atgggcgcac cggtattgct cacagtcatg ccgcgtttca
     1801 aaccgtccga gctgcccatc gcaatggtac ggactacgcc gtcgcccaaa agctgttgga
     1861 cttccaaagt cagaccgttt tcgtctaatt tcaaagcgtc gtaaacgcgc ggaatcatgt
     1921 cgcgtggaaa ttccacgtca acaaccgcac cgataatttg tacgattttg ccttggctca
     1981 ttatcgtatc ctaatttctg tacaggattc agacggcatc agacagccgc cgcacctgct
     2041 acaatttctg acaattccgt ggtaatcgca gcttgacgcg atttgttata taccaaacgc
     2101 aactctttga tggcattgcc tgcattgtct gttgcagctt tcatggcaac catgcgggct
     2161 gcctgttcgg atgccatatt gtcgctcaac gcctgataaa ccacagactc taaatagcgg
     2221 cgaaccagat attccaacac tgcaagtgca gtcggttcgt agcggtattc ccagctgaac
     2281 ggtgatttgg gagctgaatc gccaatcacg ttctcaccga taggcagcaa tacttccatt
     2341 ctcggttctt gacgcatggt attgacaaaa cccgaataca ccagatggat tctgtcaatt
     2401 tcatgtttct cataccgttg gaagagttct gtcaaaggtc cgagcagcat ttccattttt
     2461 ggggtatcgc ccaaatttac ggcactggca accacattca gaccaatgct ctgacacgcc
     2521 atcagacctt tactgccaag gcatacgatt tcctcttcaa taccttgatt ctgatactct
     2581 tgaacttgtg ccaaaaactt tttcaacacg ttggcgttca aaccgccaca caaaccctta
     2641 tcagacgtaa tcaaaataaa accgacacgt ctgatttccc gatgagattc cagtaacgga
     2701 ataccatgat cggtattggt ttgcgcaaga tggctcatca ccatacgcac tttttcggca
     2761 tacggacgcg ccaaacgcat ccgttcctga gtcttccgca ttttagaggt tgacaccatc
     2821 tgcatcgctt tagtgatctt ttgggtattc tgaacactgc ggattttggt gagaatctct
     2881 tttcctactg ccatttcaga ctcctttcac ttcaagcctt atgcctgata ggcgtaagaa
     2941 gatttgaagg atttcatggc tgcttcaagc gttttctcgc tctcgtcgga cattgcacct
     3001 gaagcattga cggcttccaa aacttccgga tgttgggtac ggacaaagct caaaaattca
     3061 gattcaaaag ccagagcttt ggcaaccgga acatcagaat acgaaccgtt gttgattgcc
     3121 caaagggtca aagccatttc agccgtattc aacgtactga actgtttctg tttcatcagt
     3181 tcggttacga cttcgccatg ctccaattgt ttgcgcgtag cttcatccaa atcggatgca
     3241 aattgcgaga acgccgccaa ttcacgatat tgtgccaacg ccaaacggat accgccaccc
     3301 agctttttaa tcactttggt ttgtgcagca ccgcctacgc gggatacgga aataccggca
     3361 ttgattgcag gacggatacc ggcgttgaag aggtcggttt ccaagaaaat ctgaccgtcg
     3421 gtaatcgaaa tgacgttagt cggaacgaaa gcagatacgt cgcccgcttg ggtttcgata
     3481 atcggcaaag cagtcagaga accggttttg ccttttactt cgccgttggt caatttctcc
     3541 acttcgtgtt cattgacacg tgctgcacgt tccaacagac gggagtgcag gtagaacaca
     3601 tcgccgggat aggcttcgcg gccgggcgga cggcgcaaaa gcagggaaat ttgacggtaa
     3661 gccacagcct gtttggacaa atcgtcataa acaatcaagg catcttcgcc gcggtcgcgg
     3721 aagaattcac ccatcgtaca accggagtaa ggtgcgatat attgcaatgc cgccgcttca
     3781 gatgcagttg cagcaaccac aatcgtgtgt tccatcgcgc catgctcttc caatttgcgg
     3841 accacgttgg caatagaaga tgctttttga ccgatagcga catagataca gataacaccc
     3901 gtaccttttt ggttgacgat ggcatccagc gctacggccg ttttaccggt ttgacggtcg
     3961 ccaataatca actcacgctg accgcgaccg acaggaacca tagagtcaat cgccttcaga
     4021 ccggtttgca tcggctggtc aaccgatttg cgcgcaatca cgcccggtgc gattttttcg
     4081 ataggggcgg tcaaagttgt attaatcggg cctttgccgt cgataggccg acccaatgca
     4141 tcaacgacgc gtccgaccag ttcgcgtccg accggcactt ccaagatacg accggtacag
     4201 gtaaccgtgt cgccttcttt aatatgttcg tactcgccca acactacggc gccgacggag
     4261 tcgcgctcca ggttcatcgc caagccgaaa gtgttacccg ggaattcgag catctcacct
     4321 tgcattgcat ctgacaaacc atggatgcga acgataccgt cagttaccga aatcaccgta
     4381 ccacgggtac gcacttcggc atttacagac agattttcga tcttggcttt aatcaaatcg
     4441 ctaatttcag caggattaag ctgcatgaaa actctcctaa ttcgtcatag tcgtgtacaa
     4501 ggcactcaat ttgccttgta cagacaaatc caaaacctga tcacccactt caacttttat
     4561 gccgccaatc agctccggtt cgatttcgac agagattttc agctcgctgt cgaaacgctt
     4621 attcagcatt tgcgccaact cgccgacctg tttgtcggtc aacggatagg cactgtaaat
     4681 gacggcagat ttgatatggt tgaatgataa ggtcaagtct tgatattgag catatacttc
     4741 cggcaatatc gacaaacgtt tctgcccggc caagacgata acaaagtttt tcaactcctt
     4801 gtctttcaaa ccgaccaaat cgatgaggat atctgctttt tctgaagcat tcgtttcagg
     4861 acggtcaatc aatgaagcca ccttcccttc ctgaacaacc gccgcaagtt tttccagtcc
     4921 gcccaaccaa gactcaattt ggcttttttc ctgagccaga ccgaacaatg cctttgcata
     4981 aggtctggca atcgttgcga actctgccat aagattacag ctcctgtttc agggtatcga
     5041 gcagttttgc gtgtttggaa gcatcgactt cgctgcgcaa aatagattcg gcacctttga
     5101 cagccaacac ggcaacctgc tcgcgcaggg attcgcgtgc gcggaacaat tcctgctcca
     5161 catcggcctt tgcctgagct gcaatgcgcg ccgcctcgga agaagcctgt tctttggctt
     5221 cttcgacaat tttggcggca cgtttttcgg cgttggcaac catttcggaa acctgattac
     5281 gcccttctgc caagagttct gcaacctttt tttcagcctg ctcgaaatcg cttttaccac
     5341 gctcggcagc tgccaagcct tcggcgactt ttgcggcacg ctcatccaaa gcttttgcaa
     5401 tcggcggcca cacgaatttc atggtaaacc ataccaaacc gaaaaagacg atgatttgag
     5461 cgaataatgt tgcattgata ttcacgttac ttaaccttcg tattggggtt aatcaaacag
     5521 gctgcgcctg tacggaacgg acgaatccgt cctgattatg cacctgcaaa cgggttaacg
     5581 aaggcgaaca gcagtgcaat ggcgacacca atcaagaatg cggcatcaat caaaccggca
     5641 atcaggaaca gtttggtttg cagcggaccg atcagttcgg gctgacgggc agaagactcc
     5701 aaatatttag aaccgaccat tgcgataccg atagaggcac ccagtgcgcc caatgcaacg
     5761 atcaaaccac atgcgatagc aatcaaaccc attttaaact ccttaaagaa acaaaggtta
     5821 aactacaaaa acaaactact taggaaaatc agtgcgcatc atgtgcctgt ccgatataga
     5881 cgaacgccaa cgccatgaaa ataaacgcct gcagggtaat caccaaaata tggaaaatcg
     5941 cccatgccaa accggcaata atgtggaata caaacagaat cggatccatg acttcgacgc
     6001 tgccgaaagc cgcccaagca ccgccaagca aggctatcaa caagaatacc aactcgcctg
     6061 catacatatt gccgaacaac cgcataccgt gggatacggt tttagaaaga aactcgacca
     6121 aattcagcag gaagttcgca ggtgcgagtt ttgcaccgaa cggcgcgctg aacaactcgt
     6181 gaaaccatcc gcccaatcct ttgattttga tgttgtaata gatacaaatc agcaacacgc
     6241 cgacagcgag tgccaaagtg gtgttcaaat cggcagtcgg tacgacgcgc aacagggcgt
     6301 gatggttgcc ggtaatgccc tgccatacca tcggcagcaa atcgaccggc agcatatcca
     6361 tcgcgttcat caggaaaatc cagacaaaca gcgtcagacc caacggcgcg acggcttttc
     6421 tagacttttc gttgtgaatg atgctcttac acatatcgtc cacaaactca aacaagattt
     6481 ccacggcggc ctggaaacgt ccgggaacgc ctgccgtcgc tttttttgca ccgcgccaca
     6541 acagaaagct gccgattacg cccaacagga cggcaaaaaa gacggcatca aggttaataa
     6601 acgaaaaatc agcaatgttt ttcagtccct gaccctgagt aacatccgac aaactggtca
     6661 agctctgcaa gtggtgcttg atgtagtcgg cagcggtaat ggtttcacct gccataatct
     6721 ttcactctca acaatactaa aaaaaccaaa tggctgacac cgagcagccc catcagaaac
     6781 ggggcgaaca ccagcgattg atgccataca gcaaatacgg cgagcatgga caacagcgac
     6841 agcactactt ttaaaatctc tccgaagacg aacatcctgc tttgcaggaa ggggtttccc
     6901 ctgaaaagtt ttaaaagtaa aactgcaaca aacgtgggaa gcaggtagga caaaccgcca
     6961 ccgaccgccg aaaggaatcc ggcaaaaccc catacggcaa aggcaactgc ggcgcatatg
     7021 gacaatacgg cggattgtag gatgataatc tgcttcataa agggaatgtt tccgcctcga
     7081 atttgaggcg cggctaatat aatttagaag ccttattacg tcaagcaata tgttaatctt
     7141 tgtgaaacaa cgtatcccaa tccgccgcgc tcgccgcctg aataacggcg acaggtgtca
     7201 ttctaacaca cattacatat aattacagga tattaaggag tttgtccgca atttctttac
     7261 acttttaatg ttcttacgtg atttgtttgc tttacgtgga aataataaaa aatcaacgcg
     7321 aaattgtagc agtttatcgg tcggattgtc ggcagtttgg ggaatttgct caataaataa
     7381 aaggtcgtct gaaaatattt tca
//
LOCUS       DAWGKF010000102         7365 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.102, whole genome shotgun sequence.
ACCESSION   DAWGKF010000102 DAWGKF010000000
VERSION     DAWGKF010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7365)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7365)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7365
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.102"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(205..2808)
                     /gene="pepN"
                     /locus_tag="WHR07_001450"
     CDS             complement(205..2808)
                     /gene="pepN"
                     /locus_tag="WHR07_001450"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HEZ2130657.1"
                     /translation="MSKTVRYLKDYQTPAYRILETDLHFDIAEPQTVVKSRLTVEPQR
                     IGEPLVLDGSAKLLSVKINGAAADYMLEGETLTIADVPSERFTVEVETEILPAENKSL
                     MGLYASGGNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDG
                     GECSDDRHWVKWEDPFAKPSYLFALVAGDLAVTEDYFTTMSGRNVKIEFYTTEADKPK
                     VGFAVESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADS
                     RTATDTDFEGIESVVGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRA
                     VRRIENIRLLRQHQFPEDAGPTAHPVRPASYEEMNNFYTMTVYEKGAEVVRMYHTLLG
                     EEGFQKGMKLYFQRHDGQAVTCDDFRAAMADANGINLDQFALWYSQAGTPVLEAEGRL
                     KNNVFELTIKQTVPPTPDMADKQPMMIPVKIGLLNRNGEAAAFDYQGKRATEAVLLLT
                     EAEQIFLLEGVTEAVVPSLLRGFSAPVHLNYPYSDDDLLLLLAHDSDAFTRWEAAQTL
                     YRRAVAANLAALSDGIELPKHEKLLAAVEKVISDDLLDNAFKALLLGVPSEAELWDGA
                     ENIDPLRYHQAREALLDTLAVRFLPKWHELNRQAAKQENQSYEYSPEAAGWRTLRNVC
                     RAFVLRADPAHIETVAEKYGEMAQNMTHEWGILSAVNGNESDTRNRLLAQFADKFSDD
                     ALVMDKYFALIGSSRRSDTLQQVQTALQHPKFSLENPNKARSLIGSFSRNVPHFHAED
                     GSGYRFIADKVIEIDRFNPQVAARLVQAFNLCNKLEPHRKNLVKQALQRIRAQEGLSK
                     DVGEIVGKILD"
     gene            complement(2940..3734)
                     /locus_tag="WHR07_001451"
     CDS             complement(2940..3734)
                     /locus_tag="WHR07_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEZ2130658.1"
                     /translation="MNTILAFDIETVPDVQGIRTLYELPSSLPDDEVVLFAQQKRRAQ
                     TGGDFMQHHLHQVVAISCCMRWGQDKVHVGTIGEMDDGEEVVIAKFFELIEKHTPQLV
                     SWNGGGFDLPVLHYRSLIYGINAARYWDMGDGDFGDSRDFKWNNYISRYHQRHCDLMD
                     LLALYQPRANVPLDDMAKLCGFPGKLGMDGSKVWEAFHAGRLKEIRNYCETDAVNTYL
                     MYLRFCLVSGRFDADEYEMEIKRMRNYLSAQVVEKPHWEEFVRAWE"
     gene            complement(4484..5353)
                     /locus_tag="WHR07_001452"
     CDS             complement(4484..5353)
                     /locus_tag="WHR07_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
                     /protein_id="HEZ2130659.1"
                     /translation="MKFIFFVLYVLQFLPFALLHKLADLTGLLAYLLVKPRRRIGEIN
                     LAKCFPEWSEEKRKTVLKQHFKHMAKLMLEYGLYWYAPAKRLKSLVRYRNKHYLDDAL
                     AAGEKVIILYPHFTAFEMAVYALNQDVPLISMYSHQKNKILDEQILKGRNRYHNVFLI
                     GRTEGLRALVKQFRKSSAPFLYLPDQDFGRNDSVFVDFFGIQTATITGLSRIAALANA
                     KVIPAIPVREEDNTVTLHFYPAWESFPSEDAQADAQRMNRFIEERVREHPEQYFWLHK
                     RFKTRPEGSPDFY"
     gene            complement(5404..5940)
                     /gene="ruvC"
                     /locus_tag="WHR07_001453"
     CDS             complement(5404..5940)
                     /gene="ruvC"
                     /locus_tag="WHR07_001453"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEZ2130660.1"
                     /translation="MSATVRILGIDPGSRVTGFGVIDVRGRDHFYVASGCIKTPADAP
                     LADRIAVIVRHIGEVVAVYRPQQAAVEQVFVNVNPASTLMLGQARGAALAALVSHKLP
                     VSEYTALQVKQAVVGKGKAAKEQVQHMVVQMLGLSGTPQADAADGLAVALTHALRNHG
                     LASQLNPSGMQVKRGRFQ"
     gene            complement(5943..6182)
                     /locus_tag="WHR07_001454"
     CDS             complement(5943..6182)
                     /locus_tag="WHR07_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fis family transcriptional regulator"
                     /protein_id="HEZ2130661.1"
                     /translation="MPHTLPDISQCIRQNLEQYFKDLNGTEPCGVYDMVLHQVEKPLL
                     VCVMEQCGGNQSKASVMLGLNRNTLRKKLIQHGLL"
     gene            complement(6212..7222)
                     /gene="dusB"
                     /locus_tag="WHR07_001455"
     CDS             complement(6212..7222)
                     /gene="dusB"
                     /locus_tag="WHR07_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HEZ2130662.1"
                     /translation="MHIGGYFIDNPIALAPMAGITDKPFRRFCRDFGAGWAVCEMLTS
                     DPTLRNTKKTLHRSDFTNEGGIVAVQIAGSDPQQMADAARYNVSLGAQVIDINMGCPA
                     KKVCNVQAGSALMQDEPLVAAILEAVVRAAGVPVTLKTRLGWHDDHKNLPAVARIAED
                     CGIAALAVHGRTRTQMYKGEARYELIAETKCRLNIPVWVNGDITSPQKAAAVLKQTAA
                     DGIMIGRGAQGRPWFFRDLKHYAEHGVLPPALSLAECSAAILNHIRAMHAFYGETAGV
                     RIARKHIGWYIGEMPDGEQARRDINCLDSAAAQYDMLAGYLERLAEKTDSWACAYRPN
                     TF"
BASE COUNT         1636 a         1955 c         1941 g         1833 t
ORIGIN      
        1 acaaaaacca gtacagcgtt gcctcgcctt accgtactat ctgtactgtc tgcggctttg
       61 tcgccttgtc ctgatttttg ttaatccact ataattaata tgactttgcg gccgttttgc
      121 cattgcgtaa taaaacgatg gggaagtgat gataaaacgt gtgtgtaact atatcagacg
      181 gcattgtttt tctgtttgac ggcctcaatc caaaattttg ccgacgattt cgcccacgtc
      241 tttcgacaat ccttcctgcg cccgaatgcg ctgcaatgct tgtttcacca agtttttgcg
      301 gtgcggctcg agcttgttgc agaggttgaa cgcctgcacc aaacgggcgg cgacctgcgg
      361 gttgaagcgg tcgatttcga tgactttgtc ggcgatgaag cggtagccgc tgccgtcttc
      421 tgcgtggaaa tgcgggacgt tgcggctgaa gctgccgatg agcgaacggg ctttgttggg
      481 gttttcgagg ctgaatttcg gatgctgcaa ggcggtttga acctgttgca gggtgtcgct
      541 gcggcggctt gagccgataa gggcgaaata tttgtccatc accagcgcgt cgtctgaaaa
      601 cttgtcggca aactgcgcca gcaggcggtt gcgcgtatcg ctttcgttgc cgttgacggc
      661 ggacaggatg ccccattcgt gggtcatgtt ttgcgccatt tcgccgtatt tttcggcaac
      721 ggtttcgatg tgcgcggggt cggcgcgcag gacgaaggcg cggcagacgt tgcgcagcgt
      781 gcgccagccg gcagcttcgg ggctgtactc gtagctttgg ttttcctgct tcgccgcctg
      841 acggttcaat tcgtgccatt tcggcaggaa gcggacggca agcgtgtcca acaaggcttc
      901 gcgcgcctga tggtagcgca gcgggtcgat gttttccgcg ccgtcccaca gctcggcttc
      961 agacggcacg cccaaaagca gggctttgaa ggcgttgtct aagaggtcgt ctgaaatgac
     1021 tttttcgacg gcggcaagca gtttttcgtg tttcggcagt tcaataccgt ctgaaagtgc
     1081 ggcaaggttg gcggcgacgg cacggcggta gagcgtttgt gcggcttccc agcgcgtgaa
     1141 ggcgtcgctg tcatgggcga gcagaagcag caggtcgtcg tcgctgtacg gatagttcag
     1201 atgcaccggc gcgctgaacc cgcgcagcag cgagggaacg acggcttcgg ttacgccttc
     1261 gagcaggaag atctgttcgg cttcggtcag cagcaatacg gcttcggtcg cgcgtttgcc
     1321 ctgataatcg aatgccgccg cttcgccgtt gcggttcagc agcccgattt tgacgggaat
     1381 catcatcggc tgcttgtccg ccatatcggg cgtaggcggc acggtttgtt taatggtcaa
     1441 ctcgaacaca ttgtttttca gacgaccttc cgcttccaaa acgggcgtac ccgcctggct
     1501 gtaccacaag gcgaactggt cgagattgat gccgttcgcg tccgccatcg ccgcgcggaa
     1561 atcgtcgcag gtaacggcct ggccgtcgtg gcgttggaaa tagagcttca tgcctttttg
     1621 gaagccctct tcgccgagca gggtgtgata catccgcacc acttccgcgc ctttttcata
     1681 aacggtcatg gtgtagaaat tgttcatctc ctcatagctg gcggggcgca ccggatgggc
     1741 ggtcggacct gcgtcttcgg ggaactggtg ctggcgcaaa aggcggatgt tttcgatacg
     1801 gcgcacggcg cggctggcgc ggtcgccgga aaattcttgg tcgcggaaca cggtcagccc
     1861 ttctttcagc gaaagctgga accagtcgcg gcaggttacg cggttgcccg tccagttgtg
     1921 aaaatactcg tgtccgacca cggattcaat gccttcgaaa tcggtatcag tggcggtgcg
     1981 gctgtcggca aggacgaact tggtgttaaa aatgttcaaa cccttgtttt ccatcgcacc
     2041 catattgaaa tcgcccacgg cgacgaccat gaaaatatcc aagtcgtatt ccaaaccgaa
     2101 gcgcgtttcg tcccacttca tcgcgttttt cagcgattcc acggcaaagc cgactttggg
     2161 tttgtccgct tcggtggtgt aaaactcgat tttgacgttt ctgccgctca tagtggtgaa
     2221 atagtcttct gtgaccgcca aatcgcccgc gaccaaagca aacagatagc tcggtttggc
     2281 aaacgggtct tcccatttca cccaatggcg gtcgtctgaa cactcgccgc cgtcgatttt
     2341 gttgccgttg gagagcaaaa cgggatagcg ttttttgtcc gcaacgatgg tggtcgtgaa
     2401 cttggacatc acatccggac ggtcgatgta gaacgtgatt ttgcggaagc cctccggctc
     2461 gcactgggta aatagattgc cgccggaagc atacagcccc atcagcgatt tgttttccgc
     2521 cggcaggatt tcggtttcca cttcgacggt gaagcgttcg gacggcacgt ctgcaatcgt
     2581 cagcgtttcg ccttccaaca tataatccgc cgccgccccg ttgattttga cggacaaaag
     2641 tttcgccgaa ccgtccaaca ccagcggctc tcctatcctc tgtggctcga ccgtcaaacg
     2701 ggatttcacg acggtttgcg gttcggcaat atcgaaatgc aggtcggttt cgagaatgcg
     2761 gtaggcaggc gtttggtaat ctttcagata acggacggtt ttgctcattt ttttctttca
     2821 atattgtttg gtttgactgg aaaaggcttc agacggcatg ggcgcatccc gcgtatgccg
     2881 tctgaagccg caacggcggc acgggcgcgc cgccggacaa ccggtttgaa tttcaatctt
     2941 tattcccacg cgcggacaaa ctcttcccaa tgcggctttt ccacgacttg tgcggacagg
     3001 taattccgca tccgcttgat ttccatttcg tattcatccg catcaaacct tccgctgacc
     3061 aaacagaaac gcaggtacat cagataggta tttaccgcat cggtttcgca ataattgcgg
     3121 atttccttca gcctgcccgc gtggaacgcc tcccagacct tgctgccgtc catacccaat
     3181 ttacccggaa aaccgcacag tttcgccata tcgtccagcg gcacattcgc cctcggctgg
     3241 taaagcgcga gcaaatccat caaatcgcag tggcgttggt gataacggct gatgtagttg
     3301 ttccacttga aatcgcggct gtcgccgaaa tcgccgtcgc ccatatccca atagcgcgcg
     3361 gcgttgatgc cgtatatcag ggagcggtaa tgcagtacgg gcagatcgaa accgccgccg
     3421 ttccaactga ccagttgcgg cgtatgtttt tcaatcaatt cgaaaaattt agcaatgacc
     3481 acttcctcgc cgtcatccat ctcaccgatg gtgccgacat gtactttatc ctgcccccaa
     3541 cgcatgcagc acgaaatcgc cacaacctga tgaagatgat gctgcataaa atcgccgccc
     3601 gtctgagcac ggcgtttttg ctgggcaaac agcaccactt cgtcgtcggg cagcgaggac
     3661 ggcagctcgt acaatgttcg gataccctgg acatcaggta cggtttcaat atcgaaagcc
     3721 aaaatcgtat tcatggcagt accttgcatt caaaaacaga cttgcgccta ttgtgtcatt
     3781 aaaaggccga taaaaaaaga ggcaaccccc cacaggattg ccccaatacc tcaaatcaga
     3841 gatttacgct tcacaaacaa tacaggcttt cgcctgcggc tttgcccgcg tagctcaact
     3901 ctacgccggc aaactttcgt ttcaccgttt ccgatgaaac cccgaccaat cgcaagactg
     3961 accggaaaat cctttcagac ggcatttcct gcctgtcgtg taattccatg tagcgaaatg
     4021 tacgccattt tctacgcttt gccaagcatt ttttacaata taaatgtcaa aacattaatt
     4081 ttataaaatt gctgaaaata ttaaatatat ggatttttat tttttatatt tcaataaata
     4141 taaatttaat tttgatttat atttaaattt aagcataaaa tgtcaaatat taaaggaaac
     4201 atgaaaggca tatattaaat atttatttat aacgctatgt ttttaaagaa aattaatttt
     4261 aatatattaa ctagattgtc tgcatatatt cataggtttg cggtatttct tccaaaacct
     4321 gcttcgaatt tcccgaccaa gtcttaaaaa tattgttttt gagatactta aatagcagcg
     4381 attatcaaat gaaatctgtt catataatct gccattttgc atttaaaaaa acaatcagga
     4441 gtttcgactc gaaacgcctg atatgttttg taattttacg tagtcagtaa aaatcggggc
     4501 tgccttccgg acgggtttta aaacgcttgt gcagccaaaa atactgctcg ggatgttcgc
     4561 gcacgcgttc ctcaataaag cggttcatgc gctgcgcgtc ggcctgcgca tcttcactcg
     4621 gaaaggattc ccaagcaggg tagaaatgca atgtaaccgt attgtcctcc tccctgacgg
     4681 gaatggcggg tatcactttt gcatttgcaa gcgcggcaat gcggctcaat ccggtaatcg
     4741 ttgccgtctg aataccgaaa aaatccacaa aaaccgaatc gttgcgtccg aaatcctgat
     4801 cgggcagata cagaaacggc gcgctgcttt tgcggaactg tttgacgagg gcgcgcagcc
     4861 cttcagtgcg cccgataagg aagacgttgt gatagcggtt tcggcctttc aaaatctgtt
     4921 cgtccaatat cttgtttttt tggtgggaat acatactgat cagcgggaca tcctgattaa
     4981 gcgcgtacac cgccatttca aaagcggtga agtgcggata caggatgatg actttttccc
     5041 ccgccgccag cgcgtcgtcc aaataatgct tattgcggta acgcaccagc gatttcaggc
     5101 gtttggcagg cgcgtaccaa tataagccgt attcgagcat cagtttcgcc atatgtttga
     5161 aatgctgttt caacacggtt ttacgctttt cctcactcca ttcgggaaaa cattttgcca
     5221 aattgatttc gccgatacgg cggcggggtt tgaccaaaag gtaggcgagc aagcctgtca
     5281 gatcggcaag tttgtgcagc agcgcaaacg gcagaaactg caaaacatac agtacaaaaa
     5341 atataaattt catctcgata cacattttct tttcagacgg caaaatacaa atgccgtctg
     5401 aaactattgg aaccttccac gcttgacctg catccccgac gggttgagct gggacgcaag
     5461 cccgtggttg cgtaaggcgt gggtcagcgc gacggcaaga ccgtccgccg catccgcctg
     5521 cggtgttccc gaaagcccca gcatctgcac caccatatgc tgcacctgtt cttttgccgc
     5581 cttacccttg ccgactaccg cctgtttgac ctgcaaggcg gtgtattccg aaacgggcag
     5641 cttatggctg accaatgccg ccaatgccgc gcccctggcc tgacccaaca tcagtgtcga
     5701 tgcaggattg acgttgacga aaacctgctc cactgccgcc tgttgcggcc ggtaaacagc
     5761 aacgacttcg ccgatatgcc gcacaatcac ggcaatcctg tctgccagag gcgcatcggc
     5821 gggcgttttg atgcagccgg aggcaacata aaaatgatcg cgccccctga catcgatgac
     5881 accgaaaccc gttacgcggc tgcccgggtc gatgcccaaa atacggacgg ttgccgacat
     5941 attcacagca aaccgtgttg aatcagtttc ttacgcaagg tattgcggtt cagccccagc
     6001 atcacggagg ctttggactg gttgccgccg cattgttcca tcacgcacac cagcagcggt
     6061 ttttccacct gatgcaagac catatcgtac acgccgcaag gttcggtacc gttcaggtct
     6121 ttgaaatatt gttctaaatt ttgtctgatg cattgagaaa tatcgggaag ggtatggggc
     6181 atgattgcac tttcaaagga taatcaagtg ttcagaaggt atttgggcgg taggcgcacg
     6241 cccaactgtc ggttttttcg gcaagtcttt caagataacc tgcaagcatg tcgtattgcg
     6301 ctgccgcact gtccaagcag ttgatgtcgc ggcgcgcctg ttcgccgtcg ggcatttcgc
     6361 cgatgtacca acctatgtgt ttgcgtgcga tgcgcacacc ggcggtctca ccataaaacg
     6421 cgtgcatggc gcggatgtgg ttcaaaatgg cggcactgca ttctgccaaa ctcaaggcag
     6481 gcggtaaaac accgtgttcg gcgtaatgtt tcaaatcgcg gaagaaccac ggtctgcctt
     6541 gcgcgccgcg ccctatcatg atgccgtcag cggcggtttg tttgaggacg gcggcggctt
     6601 tttgcggcga agtgatgtcg ccgttgaccc agaccgggat gttcagacgg catttggttt
     6661 cggcgatgag ttcgtaacgc gcctcgcctt tgtacatttg cgtgcgcgtg cgtccgtgga
     6721 cggcaagggc ggcgatgccg caatcttcgg cgatgcgggc gacggcaggc aggtttttgt
     6781 ggtcgtcgtg ccagcccaaa cgggttttga gggtaacggg tacgcctgcc gcacggacga
     6841 ctgcttccaa aatggcggca accagcggct cgtcctgcat cagcgcgcta ccggcttgga
     6901 cgttgcacac tttcttggcg ggacagccca tgttgatgtc gataacctgc gccccgaggc
     6961 tgacgttgta acgcgcggca tccgccatct gctgcggatc gctgccggca atctgcacgg
     7021 caacgatgcc gccttcattg gtaaaatcac tgcggtgcag ggtctttttg gtatttctaa
     7081 gcgtcgggtc gctggtcagc atttcgcaca ccgcccaacc cgcgccgaaa tcgcggcaga
     7141 agcggcggaa gggtttgtcg gtaatgcccg ccatcggcgc aagtgcgatg gggttgtcga
     7201 taaaatagcc gccgatgtgc ataatgggcc cgcgtttcaa aaaagtacgc cattgtacat
     7261 tttttaagca ggatttccaa tctccggacg cgcccgcgat tggggcagac accgttttat
     7321 ggcataatcc gcacacagat tccctgcccc gccactcaca ggagg
//
LOCUS       DAWGKF010000103         7361 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.103, whole genome shotgun sequence.
ACCESSION   DAWGKF010000103 DAWGKF010000000
VERSION     DAWGKF010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7361)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7361)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7361
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.103"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            46..990
                     /gene="tehA"
                     /locus_tag="WHR07_001456"
     CDS             46..990
                     /gene="tehA"
                     /locus_tag="WHR07_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate transporter/tellurite-resistance
                     protein TehA"
                     /protein_id="HEZ2130663.1"
                     /translation="MSASKKFPIPLSYFSIALGLFALGLSWRYGASVGLLPALAAESL
                     LAAASVVWLLLVAAYLIKMFAYRNDFLSDLRDLVQCCFISAIPITAMLEGLALKPYQA
                     GAAAVLIYVGVAGQLAFSMYRAAGLWRGLHSLEATTPIIYLPTVATNFVSASSLAALG
                     HHDYAALFFGAGMFSWLSLEASILGRLRTAAPVGTAARGVVGIQLAPAFVGCGAYFAV
                     GGKVDGFALALIGYGCLQLLFLLRLTRWFWEGGFTMSFWGFSFGFAAMAGCGLHLAAS
                     GVLSGLGLTLATAGSAGVALLLVGTLHRIATGRFLVRG"
     gene            complement(1064..1747)
                     /locus_tag="WHR07_001457"
     CDS             complement(1064..1747)
                     /locus_tag="WHR07_001457"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HEZ2130664.1"
                     /translation="MELVFIRHGQSEWNAKNLFTGWRDVKLSEQGLAEAAAAGKKLKE
                     NGYEFDIAFTSVLTRAIKTCNIVLEESDQLFVPQIKTWRLNERHYGQLQGLDKKQTAE
                     QYGDEQVRIWRRSYDTLPPLLDKDDEFSAHKDRRYAHLPADVVPDGENLKVTLERVLP
                     FWEDQIAPAILSGKRVLVAAHGNSLRALAKHIEGISDKDIMGLEIPTGQPLVYKLDDN
                     LKVLEKFYL"
     gene            2044..4347
                     /gene="parC"
                     /locus_tag="WHR07_001458"
     CDS             2044..4347
                     /gene="parC"
                     /locus_tag="WHR07_001458"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HEZ2130665.1"
                     /translation="MNMQPHAPHTDSNTLMLGRYAERAYLEYAMSVVKGRALPEVSDG
                     QKPVQRRILFAMRDMGLTAGAKPVKSARVVGEILGKYHPHGDSSAYEAMVRMAQDFTL
                     RYPLIDGIGNFGSRDGDGAAAMRYTEARLTPIAELLLSEINQGTVDFVPNYDGAFDEP
                     LHLPARLPMVLLNGASGIAVGMATEIPSHNLNEVTQAAIALLKKPTLETADLMQYIPA
                     PDFAGGGQIITPADELRRIYETGKGSVRVRARYEIEKLARGQWRVIVTELPPNANSSK
                     ILAEIEEQTNPKPKAGKKQLNQDQLNTKKLMLDLIDRVRDESDGEHPVRLVFEPKSSR
                     IDTDTFINTLMAQTSLEGNVSMNLVMMGLDNRPAQKNLKTILQEWLDFRTVTVTRRLK
                     FRLNQVEKRLHILEGRLKVFLHIDEVIKVIRESDDPKADLMAAFGLTEIQAEDILEIR
                     LRQLARLEGFKLEKELNELREEQGRLNILLSDENEKRKLIIKEIQADMKQYGDARRTL
                     VEEAGRAVLTQTTADEPITLILSEKGWIRSRAGHNLDLSQTTFKEGDRLKQTLEGRTV
                     LPVVILDSSGRTYTLDAAEIPGGRGDGVPVSSLIELQNGAKPVAMLTGLPEQHYLLSS
                     SGGYGFIAKLGDMVGRVKAGKVVMTADSGETVLPPVAVYASSFINPDCKIIAATNQNR
                     ALAFPIGELKIMAKGKGLQIIGLNAGESMTHTAVSSEPEILIESEGRRGAAHKDRIPI
                     SLLEAKRGKKGKLLPISGSLKQLSSPK"
     gene            4367..5884
                     /locus_tag="WHR07_001459"
     CDS             4367..5884
                     /locus_tag="WHR07_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEZ2130666.1"
                     /translation="MVISNTRELEKLKDRIPNLINIARIAIVFPLMIMHILGLETGSR
                     ANLHASWTAWAFYVWLAIACWLIFFSIIHPHWQWQSLKMPRFSAVADITMIGVLTYLF
                     GGIDSGFGILILPFVVCSCLLSYGRYPLLYASYAAILLIFNAIADGDIGKYPLISDAR
                     TASATFILVAASYLSAIFTSLSVKYIDRAGKLAHENHAAYRRIRGLNQTVLNRVQEAV
                     VVINVEHQTILFNKKAKDLLPMLEIGQHTALFDPITVLWDKASPHTFEYVLGTSGLNA
                     GIRAVPVNKGPDKLLILYIRPQSEIQAEALSVKLAALGQLTANLAHEIRNPMSAIRHA
                     NDLLRENMEAGAADPFNAKLCKIIDGNVCRIDKMLEDISSLNKRNKTERETIGLIPFW
                     EEFKQEFLLGHPDAAGCIRLDMQGNHPTAYFDPAHLRQIMWNLANNAWRHSRKQPGSI
                     SVTIRPAQKNTVCILFADRPKCRNTCSNPFTPRRKTAPASGCMSPANWRTPISAI"
     gene            5936..6403
                     /locus_tag="WHR07_001460"
     CDS             5936..6403
                     /locus_tag="WHR07_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding response regulator"
                     /protein_id="HEZ2130667.1"
                     /translation="MTELQHPVLVVDDETDILDLMEMTLMKMGLRVHTASGVAEAKNK
                     LDSQRYSLVLTDMRMPDSSGLEVVQHINSRLLDTPVAVITAFGNADQAQEALRCGAFD
                     PDTMQIQDYLDQIERDIIEQTLKQTEGNRTQAAKRLGISFRSMRYRMERLNIG"
     gene            6507..7259
                     /locus_tag="WHR07_001461"
     CDS             6507..7259
                     /locus_tag="WHR07_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ2130668.1"
                     /translation="MTDILIDNTATEAVRALIQAFSLVPVSQPPEQGSYLLAEHDTVS
                     LRLVGEKSSVIVDFASGAAQYRRTKGGGELIAKAVNHTAHPTVWDATAGLGRDSFVLA
                     SLGLAVTAFEQHPAVACLLSDGIRRALLNPETQDTAARITLHFGNAAVQMPALVQTQG
                     KPDIVYLDPMYPERRKSAAVKKEMTYFHRLVGEAQDEAALLHTARQTAKKRVVVKRPR
                     LGEHLAGQAPAYQYTGKSTRFDVYLPYGTDKG"
BASE COUNT         1655 a         2224 c         1920 g         1562 t
ORIGIN      
        1 cactatatct gtgcgttacg acggcatgcc gtctgaaggg tgtttatgtc tgcatctaag
       61 aaatttccga ttcctttgag ctatttcagc atcgcgctgg gcttgtttgc cttggggctg
      121 tcgtggcgtt acggcgcgtc tgtcgggctg ctccccgcct tggccgccga atcgctgctt
      181 gcggcggctt cggttgtctg gctcttgctg gtggcggcat acctgatcaa aatgtttgcg
      241 taccgaaacg attttttgtc tgatttgcgc gacttggtgc aatgctgctt catcagcgcg
      301 attccgatta ccgctatgct ggagggactc gcgctgaagc cctatcaggc aggcgcggcg
      361 gcagtcctga tttatgtcgg cgttgccgga cagttggcgt tttcgatgta tcgggcggcc
      421 ggtctgtggc gcggcctgca ttccttggag gcgacgacgc cgattattta tctgcctacg
      481 gttgcgacaa actttgtcag cgcgtcatct ctggcggcgt tggggcatca tgattatgca
      541 gctttgtttt tcggcgcggg tatgttttcc tggctgagct tggaagcctc catcttgggc
      601 aggctgcgca cggcggcacc ggtcggcacg gcggcgcgtg gcgtggtcgg catccagctt
      661 gcgcccgcct ttgtcggctg cggcgcgtat tttgccgtcg gcggtaaagt cgacggtttt
      721 gcgttggcat taatcggcta cggctgcctg cagcttttgt tcttgctacg cctgacccgc
      781 tggttttggg aaggtggttt tacgatgagc ttttggggat tttcattcgg tttcgcggca
      841 atggcaggat gcggtctgca tctggcggct tctggcgtat tgtcgggctt ggggctgacg
      901 cttgccaccg ccggatcggc aggcgtggcg ctgctgcttg tcggtacgct gcaccggata
      961 gcgacggggc gtttcttggt acgcggctga tgcgttttgc cgccttgtca aaaatgccgt
     1021 ctgaacgctc aagccttcag acggcatttt ttatttcaca cccttacagg tagaattttt
     1081 cgaggacttt caaattgtcg tccaatttgt acaccaacgg ctgaccggtc gggatttcca
     1141 agcccatgat gtctttgtcg gaaatgccct cgatgtgttt tgccagcgcg cgcagggagt
     1201 tgccgtgcgc cgccaccaag acgcgtttgc cgctcaaaat cgcgggggcg atttggtctt
     1261 cccaaaacgg caatacgcgc tccagcgtta ctttcaggtt ttcgccgtcg ggtacgacat
     1321 cggcaggcag atgggcatag cggcggtctt tgtgtgcgga aaactcatcg tctttgtcca
     1381 aaagcggcgg cagggtgtcg tagctgcgcc gccagatgcg gacttgctcg tcgccgtatt
     1441 gttcggcggt ttgttttttg tccaggcctt gcagttggcc gtagtggcgt tcgttcagcc
     1501 gccatgtttt gatttgcggt acgaacagtt ggtcggattc ttccaaaacg atgttgcagg
     1561 tcttaatcgc gcgggtcagg acggatgtga aggcgatgtc gaactcatag ccgttttctt
     1621 tcagtttttt accggcggcg gcagcctcgg caagcccctg ctcgctcagc ttcacgtcgc
     1681 gccagcctgt aaacaggttt ttcgcgttcc attcgctttg tccgtggcgg ataaatacca
     1741 gttccatatc gtctccaatg tgtgaaagtg ggaaagcctt atttataaca tattttcaca
     1801 tttcccgtat ttgattcaga ttcagacacg cgcccactat ggtttgccgt tttgatttac
     1861 aataatgtcc tttgttttac attccgcata cacaatgttt caacacacag gacgacacat
     1921 aaagcaccgc cctatgtgtt gccctgattt ggaaggggtt gccccctccc aaataaagtc
     1981 tgattctacc gccccgaagg acagatgtcc aagtggcggg gtttcaaccg aaaaggaaat
     2041 acgataaata tgcaaccgca cgctccacat accgattcca atacgctgat gctcggccga
     2101 tacgccgaac gcgcctatct cgaatacgcc atgagcgtgg tcaaaggccg cgcgctgcct
     2161 gaagtttcag acggccaaaa gcccgttcag cggcgcattt tgtttgcgat gcgcgatatg
     2221 ggtttgacgg cgggggcgaa gccggtgaaa tcggcacgcg tggtcggtga gattttgggt
     2281 aaataccatc cgcacggcga cagttccgcc tatgaggcga tggtgcggat ggcgcaggat
     2341 tttaccttgc gctatccctt aatcgacggc atcggcaact tcggttcgcg cgacggcgac
     2401 ggtgcggcgg cgatgcgtta caccgaagcg cggctcacgc cgattgcgga attgctgttg
     2461 tccgaaatca atcagggaac ggtggatttc gtgccgaact acgacggcgc gtttgacgag
     2521 ccgctgcacc tgcccgcccg cctgcctatg gtcttgctca acggcgcgtc aggcatcgcg
     2581 gtgggcatgg cgaccgagat tccgtcgcac aatttgaacg aagtgacgca ggcggcgatt
     2641 gcgctgttga aaaagccgac gctggaaacc gccgacctga tgcaatatat tcctgcgccc
     2701 gattttgccg gcggcggtca aatcatcacg ccggcggacg aattgcgccg gatttatgaa
     2761 accggcaagg gcagcgtgcg cgtgcgtgcg cgttatgaaa tcgaaaaatt ggcgcgcgga
     2821 caatggcgcg tcatcgtaac cgagctaccg ccgaacgcca attcctccaa aatccttgcc
     2881 gaaatcgaag agcagaccaa cccgaaaccg aaagcgggca aaaagcagct caaccaagac
     2941 cagctcaata ccaaaaagct gatgctggat ttaatcgacc gcgtgcgcga cgagtccgac
     3001 ggcgaacatc ccgtgcgact ggtgttcgaa ccgaaatcca gccgcatcga taccgatacc
     3061 ttcatcaaca cgctgatggc gcaaacttcg ctggaaggca atgtgtccat gaacttggtg
     3121 atgatggggc tggacaaccg ccccgcgcag aaaaacctga aaacgatttt gcaggaatgg
     3181 ctggatttcc gcaccgtaac cgtaacacgc cgtctgaaat tccgtttgaa ccaagtggaa
     3241 aaacggctgc acatcctcga aggccgtctg aaagtctttc tgcacatcga cgaagtgatt
     3301 aaagtcatcc gcgaatcaga tgacccgaaa gccgatttga tggcggcgtt cgggctgacc
     3361 gaaatccagg ccgaagacat tttggaaatc cgcctgcgcc agttggcgcg tttggaaggt
     3421 ttcaaactcg aaaaagaatt gaacgagttg cgcgaggaac aaggccgtct gaatatcctt
     3481 ttgagcgacg aaaacgaaaa acgcaagctg attatcaaag aaatacaggc ggatatgaaa
     3541 caatacggcg acgcgcgacg cacgctggtg gaagaagccg gacgcgccgt gttgacgcag
     3601 accactgccg acgaacccat cacgctgatt ctgtcggaaa aaggctggat acgcagccgc
     3661 gccggacaca accttgattt gagccaaacc acgttcaaag aaggtgaccg cctcaaacaa
     3721 acccttgaag gccgcaccgt tttacctgtc gtcatcttgg attcatcggg cagaacctac
     3781 acgctcgatg ccgccgaaat ccccggcgga cgcggcgacg gcgtgccggt ttcatcctta
     3841 atcgagctgc aaaacggtgc gaaacccgtt gcgatgttga caggattgcc ggaacaacat
     3901 tatttattat caagcagcgg cggctacggc ttcatcgcca aactgggcga tatggtcggg
     3961 cgcgtgaaag cgggcaaagt ggtgatgacc gcagacagcg gcgaaaccgt tttgccgccg
     4021 gttgccgtct atgcctcctc gttcatcaac cccgactgca aaatcattgc cgccaccaat
     4081 caaaaccgcg ccctcgcctt ccccatcggc gaattgaaaa ttatggcgaa aggcaaaggg
     4141 ctgcaaatca tcggattaaa cgccggcgaa tcgatgacgc ataccgccgt ttcttccgag
     4201 ccggaaatcc tgattgaaag cgaaggcagg cgcggcgcag cgcacaaaga ccgcatcccc
     4261 atctccctgc ttgaggcaaa acgcggcaaa aaaggcaaac tattacccat atcgggcagc
     4321 ctgaaacagc tttcttcccc gaaataaacc cgactctgca catactatgg taatttccaa
     4381 tacccgcgaa cttgagaaac tcaaagaccg gattcccaat ctgatcaaca tcgcccgcat
     4441 cgccatcgtt tttccgctga tgattatgca catcctcggg ctggaaaccg gcagccgtgc
     4501 gaacctgcac gcttcgtgga cggcgtgggc attttatgtt tggctcgcca ttgcctgctg
     4561 gctgattttc ttttccatca tccatccgca ttggcaatgg cagtcgctga aaatgccgcg
     4621 tttcagcgcg gtggcggaca tcacgatgat cggcgtgctg acctacctgt tcggcggcat
     4681 cgattccggc ttcggcatcc tgattctgcc cttcgtcgtc tgctcctgcc tgctcagcta
     4741 cgggcgttac cccctgctct atgccagcta cgccgccatc ctgctgatat tcaacgccat
     4801 tgccgacggc gatatcggca aatatccgct catatcggat gcccgaaccg cctcggcaac
     4861 cttcatcctt gtcgccgcct cctatctttc cgccatcttc acctccctgt cggtcaaata
     4921 catcgaccgt gccggaaaac ttgcccatga aaaccacgcc gcctaccgcc gcatcagggg
     4981 cttgaaccaa accgtactca accgcgttca ggaagcggtc gtcgtcatca acgtcgagca
     5041 tcagaccata ctgttcaata aaaaggcaaa agacctgcta cccatgcttg aaatcggaca
     5101 gcataccgcc ctgttcgacc ctattaccgt tttatgggac aaggcctctc cgcacacttt
     5161 cgaatacgtc ctcggcacat ccggcctgaa cgccggcatc cgcgccgttc cggtcaacaa
     5221 agggccggac aagctgctta tcctctacat ccgcccgcaa agcgaaattc aggcggaagc
     5281 cctgtccgtc aaacttgccg cgctcggaca actgaccgcc aacctcgccc acgaaatccg
     5341 caacccgatg tccgccatcc gccacgccaa cgacctgctg cgcgaaaata tggaagcggg
     5401 ggcggcagat ccgttcaacg ccaaattgtg caaaatcatc gacggcaacg tctgccgcat
     5461 cgacaaaatg ctcgaagata tttcctcgct caacaagcgc aacaaaaccg aacgcgaaac
     5521 catcggcctg ataccgtttt gggaagaatt caaacaagag ttcctgctcg gccatcccga
     5581 tgccgccggc tgcatccgct tggatatgca gggcaatcac ccgaccgcct atttcgatcc
     5641 cgcccacctg cggcagatta tgtggaatct cgccaacaac gcgtggcggc acagccgcaa
     5701 acagcccggc tcgatttccg tcaccatccg ccccgcgcaa aaaaacaccg tctgcatcct
     5761 ctttgccgac cgcccgaagt gcaggaacac ctgttcgaac ccttttacac cacggcggaa
     5821 aacggcaccg gcctcgggct gtatgtcgcc cgcgaactgg cgcacgccaa tttcggcgat
     5881 ttgacctacc taccggaagc caaatgtttc gaactcacat taccggaaaa aaccaatgac
     5941 tgaactgcaa caccccgtcc tcgtcgtcga tgacgaaacc gacattctcg acctgatgga
     6001 aatgaccctg atgaaaatgg gcttgcgcgt ccataccgcg tcaggcgttg ccgaagccaa
     6061 aaacaagctc gacagccaac gctattcgct cgtcctgacc gatatgcgta tgccggacag
     6121 ctcggggcta gaagtcgtcc aacacatcaa cagccgcctg ctcgatacgc cggttgctgt
     6181 catcaccgcc ttcggcaatg ccgatcaggc acaggaagcc ctgcgttgcg gcgcgttcga
     6241 ccccgatacc atgcagatac aggactatct cgaccaaatc gaacgcgaca tcatcgaaca
     6301 aaccctcaaa caaaccgaag gcaaccgcac gcaggccgcc aaacgcttgg gcatcagctt
     6361 ccgttccatg cgctaccgta tggaacgcct caacatcggc tgacgacaaa acggcatccg
     6421 caccatctcc gcccacccga aaaaatgccg tctgaaacgg cacgggaaag cgggttcgcc
     6481 ccacgcccga acggacacaa aacaccatga ccgacatcct tattgacaac accgccaccg
     6541 aagccgtccg cgccctgata caggcattct cccttgtgcc cgtttcccaa ccgcccgaac
     6601 aaggcagtta cctccttgcc gaacacgata ccgtcagcct caggcttgtc ggggaaaaaa
     6661 gcagcgtcat cgtcgatttt gcctccggcg cggcacaata ccggcgcaca aaaggcgggg
     6721 gcgaactcat cgccaaagcc gtcaaccaca ccgcgcaccc caccgtttgg gacgcaaccg
     6781 caggattggg gcgcgacagc ttcgtcctcg cctcgctcgg gctggccgtt accgccttcg
     6841 agcaacatcc cgccgtcgcc tgcctgcttt cagacggcat ccgccgcgcc ctcctcaatc
     6901 ccgaaacgca agacaccgcc gcgcgcatca ccctgcattt cggcaacgcc gcagtacaaa
     6961 tgcccgcact tgttcaaaca caaggcaaac ccgacatcgt ctatctcgac cccatgtatc
     7021 ccgaacgccg caaaagtgcc gccgttaaaa aagaaatgac ctacttccac cggctcgtcg
     7081 gcgaagcgca agatgaagcg gcactcctgc ataccgcacg ccaaacagca aaaaaacgcg
     7141 tcgtcgtcaa acgcccccgc ctcggcgaac accttgccgg acaagcccct gcctaccaat
     7201 acaccggcaa aagcacccgc ttcgacgttt acctgcccta cgggacggac aagggataac
     7261 gcccataaaa caagacaccg aaaaatttgc cgttcttatg caaacgagaa accggttttt
     7321 gcgtttcgac tgttttggat aaatcatcac accttaaagt t
//
LOCUS       DAWGKF010000104         7204 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.104, whole genome shotgun sequence.
ACCESSION   DAWGKF010000104 DAWGKF010000000
VERSION     DAWGKF010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7204)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7204)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7204
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.104"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(63..147)
                     /locus_tag="WHR07_001462"
     tRNA            complement(63..147)
                     /locus_tag="WHR07_001462"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(111..113),aa:Leu,seq:caa)
     gene            424..1077
                     /locus_tag="WHR07_001463"
     CDS             424..1077
                     /locus_tag="WHR07_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEZ2130669.1"
                     /translation="MFSVPRSFLPGVFVLAALAACKPQDNSAAQVASSSASASAAENA
                     AKPQTRGTDMRKEDIGGDFTLTDGEGKPFSLSDLKGKVVILSFGFTHCPDVCPTELLT
                     YSDTLKQLGGQAKDVKVVFVSIDPERDTPEIIGKYAKQFNPDFIGLTATGDQNLPVIK
                     QQYRVVSAKVNQKDDSENYLVDHSSGAYLIDKNGEVAIFSPYGSEPETIAADVRTLL"
     gene            1156..1809
                     /locus_tag="WHR07_001464"
     CDS             1156..1809
                     /locus_tag="WHR07_001464"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEZ2130670.1"
                     /translation="MQDNALTIALSKGRIFEETLPLLAAAGIVPTEEPEKSRKLIIGT
                     NHENIRLVIVRATDVPTYVRYGAADFGIAGKDVLIEHGGTGLYRPLDLEIAKCRMMVA
                     VRKGFDYEAASQPGCRLKIATKYPEIAASHFAGKGVHVDIIKLYGSMELAPLVGLSDA
                     IVDLVSTGNTLKANGLEAVEHIVDISSRLVVNKAALKTKYALLEPIIQAFGGAVKAK"
     gene            1913..2812
                     /locus_tag="WHR07_001465"
     CDS             1913..2812
                     /locus_tag="WHR07_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HEZ2130671.1"
                     /translation="MVAKIKKFSDSTLSVLNNGERRFYVYCLTDLKKDKILYIGKGCG
                     NRIFEHEWVASRSQDPVSGEIIDRKLKAISKCKKLGRYIISYHLTEVEALAAESALIH
                     FVKSVLGKKLKNKIAGHGPGGISVEELDRRFGFSSLPLNEINPDGLILAIKIHNAFDL
                     DTDEELDYLFDNQDDANLKSRTLGNWVIGKDVASKVKYVIGVHTGLQNAVVSAYEVDG
                     FETMVEETKNGRKQSRYRFRTTSRSEEVLAKLGLQQKCLPELKFGSGGEKAYIRPKTE
                     TETEQENIQTTPNPKIKKEKTKS"
     gene            2809..4098
                     /gene="hisD"
                     /locus_tag="WHR07_001466"
     CDS             2809..4098
                     /gene="hisD"
                     /locus_tag="WHR07_001466"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEZ2130672.1"
                     /translation="MKKLNTQSPDFQAGLKALLAFETAQNPETERIVADICADVQKRG
                     DAALIEYTNKFDQTNAKSIDDLILTQADLNAAFERIPNDVQTALQTAARRVESYHQRQ
                     KMESWSYTDEDGTLLGQQITPLDRVGIYVPGGKAAYPSSVIMNAMPAHVAGVKEIIMV
                     VPTPKGERNDIVLAAAYVAGVTKVFTVGGAQAVAALAYGTETIPQVDKITGPGNAFVA
                     AAKRRVFGVVGIDMVAGPSEILVIADGTTPADWVAMDLFSQAEHDEIAQAILIGTSQA
                     YLDEVEAAMDRLIETMPRRDIIEASLGNRGAMILAKDLDEACEIANYISPEHLELSVE
                     NPQEWAKKIRHAGAIFMGRYTGESLGDYCAGPNHVLPTSRTARFSSPLGTYDFQKRSS
                     LIQVSEQGAQKLGETASVLAHGESLTAHARAAEFRMK"
     gene            4144..5241
                     /locus_tag="WHR07_001467"
     CDS             4144..5241
                     /locus_tag="WHR07_001467"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HEZ2130673.1"
                     /translation="MKSVRSFIRDDIQAMSAYQIADVPPGFAKLDSMESPVHPFAGHE
                     TLLQEWQARLAAAPIHLYPNPSGSGLQEALRSAFDIPDCADIALGNGSDELIQFITML
                     TAKPGAAMLAAEPSFVMYRHNAALYGMDYVGVPLNGDFTLNLPAVLEAVRKHRPALTF
                     IAYPNNPTGVCFTRAEIEAVIEASDGIVVVDEAYGAFNGDSFLPQAGSIPNLIVMRTV
                     SKIGFAGLRIGYAAGCPEVIGELQKILPPYNMNQLSLTTAKLALQHYGIISANIDSLK
                     NERERMFAELGKICRLNTFPSQANFITIRVPDADLLFDTLKQNRILVKKLHGAHPLLE
                     HCLRITVGSPAQNDAVLNIIRQLYCQPTDFL"
     gene            5238..6155
                     /gene="hisB"
                     /locus_tag="WHR07_001468"
     CDS             5238..6155
                     /gene="hisB"
                     /locus_tag="WHR07_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HEZ2130674.1"
                     /translation="MNLTKTQRQLHNFLTLAQEAGSLSKLAKLCGYRTPVALYKLKQR
                     LEKQAEDPDARGIRPSLMAKLEKHTGKPKGWLDRKHRERTVPETAAESTGTAETQIAE
                     TASAAGCRSVTVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDID
                     ISCKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLS
                     GRPGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFK
                     AFGRALRMAVEHDPRMAGQTPSTKGTLTA"
     gene            6250..7119
                     /locus_tag="WHR07_001469"
     CDS             6250..7119
                     /locus_tag="WHR07_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEZ2130675.1"
                     /translation="MSANEYTQIGWIGLGQMGLPMVTRLLDGGIEVGVYNRSPDKTAP
                     ISAKGAKVYGNTAELVRDYPVIFLMVSDYAAVCDILNGVRDGLAGKIIVNMSTISPTE
                     NLAVKALVEAAGGQFAEAPVSGSVGPATNGTLLILFGGSEAVLNPLQKIFSLVGKKTF
                     HFGDVGKGSGAKLVLNSLLGIFGEAYSEAMLMARQFGIDTDTIVEAIGGSAMDSPMFQ
                     TKKSLWANREFPPAFALKHASKDLNLAVKELEQAGNTLPAVETVAASYRKAVEAGYGE
                     QDVSGVYLKLAEH"
BASE COUNT         1880 a         2124 c         1724 g         1476 t
ORIGIN      
        1 tagttttatc tatttcatta aacagcaata gacaaaaaaa ataaccgctc taaaagcggt
       61 tgtggtgccc agggtcggac tcgaaccgac acaccttgcg gcgggggatt ttgagtcccc
      121 tgcgtctacc aatttcgcca cctgggctgg tgaagaagtc gtcattataa tggcttttga
      181 aattctgtaa accttttttt tgaaattatt ttatctgttt ttattttatt tttgatttta
      241 aatagaattt ttattatttt aatcttactg ttctttccgc tccaaagatt ctgtatgatt
      301 cggcaattcc tgccgtgcag acaacgtaaa aaaatactac attaaatctg ccaaacgcgt
      361 taagatggaa atattcaaat tccgtacgaa tcaggttttg ctatttattc ttgggagatt
      421 gtcatgtttt ccgtaccgcg ttcctttttg ccgggcgttt tcgtacttgc cgcgcttgcc
      481 gcctgcaaac ctcaagacaa cagtgcggcg caagtcgctt cttcaagtgc atccgcgtcg
      541 gctgcggaaa atgcggcaaa gccgcaaacg cgcggtacgg atatgcgtaa ggaagacatc
      601 ggcggcgatt tcacgctgac cgacggcgaa ggcaagcctt tcagcctgag cgatttgaaa
      661 ggcaaggtcg tgattctgtc tttcggcttt acgcactgtc ccgatgtctg cccgacagag
      721 cttttgacgt acagcgacac gttgaagcag ttgggcgggc aggctaagga cgtgaaagtg
      781 gtgttcgtca gcatcgatcc ggaacgcgac acgcctgaaa tcatcggcaa gtatgccaaa
      841 cagttcaatc cggactttat cggtctgacg gcaacgggcg accaaaacct gccggtcatc
      901 aagcagcaat accgcgtggt ttctgccaaa gtcaatcaaa aagacgacag cgaaaactat
      961 ttggtcgacc actcttccgg tgcgtatctc atcgacaaaa acggtgaggt tgccattttc
     1021 tcgccttacg gaagcgagcc ggaaacgatt gctgccgatg taaggaccct gctctgataa
     1081 aaccgtatgc cgtctgcacc gtcggcgcct gttcagacgg cattattgtt tcaaccgaca
     1141 aaggacatcc acaccatgca ggataatgct ttgacaatcg ccttatccaa ggggcgcatt
     1201 tttgaggaga cgctgccgct gcttgccgct gccggcattg ttccgactga agagcctgaa
     1261 aaatcgcgca agctgattat cgggacgaac catgaaaaca tccgccttgt cattgtccgc
     1321 gcaaccgatg tgccgactta tgtccgctac ggcgcggcgg acttcggcat tgcgggcaaa
     1381 gacgtgctga tcgaacacgg cggcacgggg ctttaccggc ctttggattt ggagattgcc
     1441 aagtgccgca tgatggttgc tgtgcgtaaa gggtttgatt acgaagcagc ttcgcaaccc
     1501 ggatgccgtc tgaagattgc cacgaagtat cctgaaatcg cggcatctca ttttgccggc
     1561 aagggtgtcc atgtggacat tatcaaactg tacggctcga tggaacttgc gccgctggtc
     1621 ggcttgagcg atgcgattgt ggacttggtt tcgacgggca acaccttgaa ggcaaacggc
     1681 ttggaagcag tcgaacacat cgtcgacatt tccagccgcc tggtggtcaa caaggctgct
     1741 ttgaaaacga aatacgcgct gctggagccg attattcagg cgttcggcgg cgcagtgaag
     1801 gcgaagtaag catccatttg aataaagatg cgttttcaga cgaccctatc cgttcccgcc
     1861 gacaggtcgt ctgaaaatat caccggcagt aaactgtata ggagaagtta aaatggttgc
     1921 aaaaataaaa aaattctcag attcaaccct ttccgttttg aataacggcg agcgtcggtt
     1981 ttatgtctat tgtctgaccg acctgaaaaa agacaaaatc ctctacatcg gcaaaggctg
     2041 cggtaatcgt atcttcgagc atgaatgggt tgctagtcgt tcacaagacc cagtctccgg
     2101 cgagattatc gatcggaaac tcaaagccat ctccaaatgc aagaaactcg gtcgctatat
     2161 catcagctat catctgactg aagtcgaagc actcgccgcc gaatctgcct taattcattt
     2221 tgttaaatct gtcttgggta aaaaactcaa aaataaaatt gccgggcatg gtccgggtgg
     2281 tattagcgta gaagaactag atcgccgctt tggattctct tctctcccac ttaacgagat
     2341 taaccccgac gggctgattc tcgccatcaa aatccacaat gctttcgatt tagatactga
     2401 cgaagaatta gactaccttt tcgacaacca agacgatgcc aacctcaaat cgcgtacgtt
     2461 gggcaactgg gttatcggta aagatgttgc ttcaaaagtg aaatacgtta tcggcgttca
     2521 caccggtctg caaaacgctg ttgtcagtgc atacgaagtg gacggttttg aaacaatggt
     2581 tgaggaaacc aaaaacggta gaaaacaatc ccgttaccgt ttccgcacta cctctcgtag
     2641 cgaagaggta ttagccaaac tcggtctgca acaaaaatgc ctgcccgaat tgaagtttgg
     2701 tagcggggga gaaaaagcgt atatcagacc caaaacagag acagaaactg aacaagagaa
     2761 tattcagacg acccccaatc caaaaataaa aaaggaaaaa accaaatcat gaaaaaactc
     2821 aacacccaat cgcccgattt ccaagccgga ctcaaagccc tgctggcttt tgaaaccgcg
     2881 caaaaccccg aaaccgaacg catcgtcgcc gacatttgcg ccgacgtgca aaagcgcggc
     2941 gatgcggctt tgattgaata caccaacaaa ttcgatcaga caaacgctaa aagcatcgat
     3001 gatttaatac tcacgcaagc cgatttgaac gcggcgttcg agcgcattcc gaacgacgtt
     3061 cagacggcat tgcagaccgc cgcccgccgt gtcgaaagct accaccaacg ccaaaaaatg
     3121 gaatcgtgga gctacaccga tgaagacggc acgctgttgg gacaacagat taccccgctt
     3181 gaccgcgtcg gcatttacgt ccccggcggc aaggcggcat atccgagttc cgtcatcatg
     3241 aacgccatgc ccgcccacgt cgcaggcgtg aaagaaatca tcatggtcgt gccgacaccg
     3301 aaaggcgaac gcaacgacat cgtgcttgcc gccgcatacg tcgccggcgt aaccaaagtc
     3361 ttcaccgtcg gcggcgcgca ggcggttgcc gccctcgcct acggcacgga aaccatcccc
     3421 caagtcgata aaatcaccgg tccgggcaac gccttcgtcg ccgccgccaa acgccgcgtg
     3481 ttcggcgtgg tcggcatcga catggtggcg gggccgtctg aaatcctggt catcgccgac
     3541 ggcacgacac ctgccgattg ggtggcgatg gatttgttca gccaggccga acacgacgaa
     3601 attgcccaag ccatcctcat cggcacgtcg caagcgtatc tcgacgaagt agaagccgct
     3661 atggaccgcc tgatcgaaac tatgccgcgc cgcgacatca tcgaagcctc gctcggcaac
     3721 aggggcgcga tgatactcgc caaagacttg gacgaagcct gcgaaatcgc caactacatt
     3781 tcccccgaac acttggaact gtcagtcgaa aatccgcagg aatgggcgaa aaaaatccgc
     3841 cacgccggtg cgattttcat gggacgctac accggcgaaa gcctcggcga ctactgcgcc
     3901 ggtccaaacc atgtattgcc caccagccga accgcccgct tttcctcgcc tttggggaca
     3961 tatgatttcc aaaaacgctc cagcctgatt caggtttcgg aacagggcgc gcaaaaatta
     4021 ggcgaaaccg ccagcgtgct ggcacacggc gaaagcctga ccgcccacgc ccgcgcggca
     4081 gagttccgta tgaaataatg ccgaaacggc gtacaggcat attccaacca ttaaggaaac
     4141 acgatgaaat ccgtccgctc cttcatccgc gacgacatac aagctatgtc ggcatatcag
     4201 attgccgacg ttccgcccgg ctttgccaaa ctcgattcga tggaaagtcc cgtccaccct
     4261 tttgccggac atgaaacgct gttgcaggaa tggcaggcac ggcttgccgc cgcgcccatc
     4321 catctttacc ccaatccctc cggcagcggt ttacaggaag cattacgttc ggcgttcgac
     4381 attcccgact gcgccgacat cgcgctgggc aacggctcgg acgagctgat acagttcatc
     4441 acgatgctga ccgccaaacc gggcgcggca atgttggcag ccgaacccag tttcgtcatg
     4501 taccgccaca acgccgcgct gtacggcatg gattatgtcg gcgttccact gaacggagat
     4561 ttcaccctca acctgcccgc cgtcctcgaa gccgtcagga agcaccgccc tgccctgacc
     4621 tttatcgcct accccaacaa ccccaccggc gtatgtttca cgcgtgccga aatcgaagcc
     4681 gtcatcgaag cttcagacgg catcgtcgtc gtcgacgaag cctacggcgc attcaacggc
     4741 gacagcttcc tgccgcaggc gggcagcatt cccaacctca tcgtcatgcg taccgtcagc
     4801 aaaatcggtt ttgccggact gcgtatcggc tatgcggcag gctgtcccga agtcatcggc
     4861 gaactgcaaa aaatcctgcc gccctacaat atgaaccaac tgagcctgac caccgccaaa
     4921 ctcgccctgc aacactacgg catcatctct gccaacatcg acagcctgaa aaacgaacgc
     4981 gaacggatgt tcgccgaatt gggcaaaata tgccgtctga acacctttcc aagtcaggca
     5041 aacttcatta ccatacgcgt acccgatgcc gatttgttgt ttgacacgct caaacaaaac
     5101 cgcatcttgg ttaaaaaact gcatggcgcg cacccgcttt tggaacactg cctgcgcatt
     5161 accgtaggca gccccgcaca aaacgatgcc gttctcaaca tcattcgcca actttactgc
     5221 caaccaacgg atttcctatg aatttgacta aaacacaacg ccaactgcac aactttctga
     5281 ccctcgccca agaagcaggt tcgctgtcca agctcgccaa actctgcggc taccgtaccc
     5341 ccgtcgcact ctacaaactc aaacaacgcc ttgaaaagca ggcagaagac ccagatgcac
     5401 gcggcatccg tcccagcctg atggcaaaac tcgaaaaaca caccggcaaa cccaaaggct
     5461 ggctcgacag aaaacaccgc gaacgcactg tccccgaaac cgccgcagaa agcaccggaa
     5521 ctgccgaaac ccaaattgcc gaaaccgcat ctgctgccgg ctgccgcagc gttaccgtca
     5581 accgcaatac ctgcgaaacc caaatcaccg tctccatcaa cctcgacggc agcggcaaaa
     5641 gcaggctgga taccggcgta cccttcctcg aacacatgat cgatcaaatc gcccgccacg
     5701 gcatgattga catcgacatc agctgcaaag gcgacctgca catcgacgac caccacaccg
     5761 ccgaagacat cggcatcaca ctcggacaag caatccggca ggcactcggc gacaaaaaag
     5821 gcatccgccg ttacggacat tcctacgtcc cgctcgacga agccctcagc cgcgtcgtca
     5881 tcgacctttc cggccgcccc ggactcgtgt acaacatcga atttacccgc gcactaatcg
     5941 gacgtttcga tgtcgatttg tttgaagaat ttttccacgg catcgtcaac cacagtatga
     6001 tgaccctgca catcgacaac ctcagcggca aaaacgccca ccatcaggcg gaaaccgtat
     6061 tcaaagcctt cgggcgcgcc ctgcgtatgg cagtcgaaca cgacccgcgc atggcaggac
     6121 agaccccctc gaccaaaggc acgctgaccg cataaaaaac cataccgtct gaaacacccg
     6181 caggcttttc agacggtatc ggaacagata agattacact acactacaaa cagaaaagga
     6241 gtaaacatca tgtccgcaaa cgaatacaca caaatcggct ggataggctt agggcaaatg
     6301 ggtctgccta tggtaacgcg gctcttggac ggcggcatcg aagtcggcgt atacaaccgc
     6361 tcgcccgaca aaactgcccc catctccgcc aaaggcgcaa aagtttacgg caacaccgcc
     6421 gaactcgtcc gcgactatcc cgtcattttc ctgatggttt ccgactatgc cgccgtgtgc
     6481 gacatcctga acggagtccg cgacggattg gccggcaaaa tcatcgtcaa catgagcacc
     6541 atctccccga ccgaaaacct cgccgtcaaa gcacttgtcg aagccgcagg cggacagttt
     6601 gccgaagcac ccgtttccgg atcggtcggg cccgccacca acggcacgct gctgattctg
     6661 ttcggcggca gcgaagccgt tttaaacccg ctgcaaaaaa tattttccct cgtcggcaaa
     6721 aaaaccttcc atttcggcga tgtcggcaaa ggttcgggcg cgaaactcgt cttgaactcg
     6781 ctcttgggca ttttcggcga agcgtacagc gaagcgatgc tgatggcgcg gcagttcggc
     6841 atcgataccg acaccatcgt cgaagccatc ggcggctcgg caatggactc gcccatgttc
     6901 caaaccaaaa aatccctgtg ggcaaaccgc gaattcccac ccgccttcgc cctcaaacac
     6961 gcctccaaag acctcaacct cgccgtcaaa gagcttgaac aggcaggcaa caccctgccc
     7021 gccgtcgaaa ccgttgctgc cagctaccgc aaagcagtcg aagccggcta cggcgaacag
     7081 gacgtttccg gcgtttacct gaaattggca gaacactgat tgccttttcc aaacacaatg
     7141 ccgtctgaac atatttcaga cggcattttt atcaccccac gcttaaaatc agtcccgatt
     7201 atga
//
LOCUS       DAWGKF010000105         7089 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.105, whole genome shotgun sequence.
ACCESSION   DAWGKF010000105 DAWGKF010000000
VERSION     DAWGKF010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7089)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7089)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7089
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.105"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(68..427)
                     /gene="rnpB"
                     /locus_tag="WHR07_001470"
     ncRNA           complement(68..427)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="WHR07_001470"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(506..1609)
                     /gene="prfB"
                     /locus_tag="WHR07_001471"
     CDS             complement(506..1609)
                     /gene="prfB"
                     /locus_tag="WHR07_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEZ2130676.1"
                     /translation="MEAEVINQLNNTLNDLEKRSEDIRVYMDYQGKKDRLEEVIGLSE
                     DPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQ
                     EDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAER
                     KGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTS
                     FASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQC
                     QNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR
                     IKDLRTGYEVGNTKAVLDGDLDGFIEASLKQGV"
     gene            complement(1712..2605)
                     /locus_tag="WHR07_001472"
     CDS             complement(1712..2605)
                     /locus_tag="WHR07_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEZ2130677.1"
                     /translation="MVTFSKIRPLLAIAAAALLAACGTAGNNAARKPVQTAKPAAVVG
                     LALGGGASKGFAHVGIIKVLKENGIPVKVVTGTSAGSIVGSLFASGMSPDRLELEAEI
                     LGKTDLVDLTLSTSGFIKGEKLQNYINRKVGGRQIQQFPIKFAAVATDFETGKAVAFN
                     QGNAGQAVRASAAIPNVFQPVIIGRHTYVDGGLSQPVPVSAARRQGANFVIAVDISAR
                     PGKNISQGFFSYLDQTLNVMSVSALQNELGQADVVIKPQVLDLGAVGGFDQKKRAIQL
                     GEEAARAALPEIKRKLAAYRY"
     gene            2947..3396
                     /locus_tag="WHR07_001473"
     CDS             2947..3396
                     /locus_tag="WHR07_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEZ2130678.1"
                     /translation="MKIGTTWQTASAMLVLRLFAAYEFLESGLQKWNGENWFSEINDQ
                     FPFPFNLLPDALNWNLAMYAELLLPVLLLLGLATRLSALGLMVVTAVAWAAVHAGSGY
                     NVCDNGYKMALIYIVVLIPLLFQGAGGWSLDTLLKKRFCPQCRLKQD"
     gene            3470..3778
                     /locus_tag="WHR07_001474"
     CDS             3470..3778
                     /locus_tag="WHR07_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130679.1"
                     /translation="MNKNIAAALAGALSLSLAAGAVAANKPASNATGVHKSAHGSCGA
                     SKSAEGSCGAAGSKAGEGKCGEGKCGATVKKTHKHTKASKAKAKSAEGKCGEGKCGSK
                     "
     gene            3894..4736
                     /locus_tag="WHR07_001475"
     CDS             3894..4736
                     /locus_tag="WHR07_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 family protein"
                     /protein_id="HEZ2130680.1"
                     /translation="MIQHAGLGYRRDLAEDFLSLSENSPICFIEAAPENWLKMGGWAR
                     KQFDRVAERLPLALHGLSMSLGGQAPLDTDLIDGIKEMMRRYDCTFFSDHLSYCHDGG
                     HLYDLLPLPFTEEMVHHTARRIREVQDRLGCRIAVENTSYYLHSPLAEMNEVEFLNAV
                     AREADCGIHLDVNNIYVNAVNHGLLSPEAFLKNVDADRVCYIHIAGHDVETPELLIDT
                     HGAAVLPTVWDLLELAYAKLPTIPPTLLERDFNFPPFAELEAEVAKIADYQTRAGKEY
                     RRAA"
     gene            4726..5472
                     /locus_tag="WHR07_001476"
     CDS             4726..5472
                     /locus_tag="WHR07_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2063 domain-containing protein"
                     /protein_id="HEZ2130681.1"
                     /translation="MQPETSAQYQHRFAQAIRGGEAADGLPQDRLNVYIRLIRNNIHS
                     FIDRCYTETRQYFDSEEWSRLKEGFVRDAHAQTPYFQEIPGEFLQYCQSLPLLDGILA
                     LMDFEYTQLLAEVAQIPDIPDIHYSNDSKYTPSPAAFIRQYRYDVTDDLHEAETALLI
                     WRNAEDDVMYQTLDGFDMMLLEIMGSSALSFDTLAQTLVEFMPEDDNWKNILLGKWSG
                     WTEQRIIIPSLSAISENMEGNSPGQNHLSA"
     gene            5494..6081
                     /locus_tag="WHR07_001477"
     CDS             5494..6081
                     /locus_tag="WHR07_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEZ2130682.1"
                     /translation="MPLPDLTDAELIESRKLLLHFARLQLPDHPDLAEDLVQETLLSA
                     YSAGDSFQGRALVNSWLFAILKNKIIDALRQIGRQRKVFTTLDDELLDEAFESHFSQN
                     GHWTPEGQPQHWNTPEKSLNNNEFQKILQSCLYNLPENTARVFTLKEILGFSSDEIQQ
                     MCGISTSNYHTIMHRARESLRQCLQIKWFNQENPK"
     gene            6087..6266
                     /locus_tag="WHR07_001478"
     CDS             6087..6266
                     /locus_tag="WHR07_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEZ2130683.1"
                     /translation="MKKCRDIALLLSKHQDRETTPGEKISIYTHLLFCPYCREYKRQL
                     QTIKRSLAKTTRTSK"
     gene            6498..6938
                     /locus_tag="WHR07_001479"
     CDS             6498..6938
                     /locus_tag="WHR07_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130684.1"
                     /translation="MIKETLMRPIFLSFVLLPILITACSTPDKSARWENIGTISNGNI
                     HTYINKDSVRKNGNLMIFQDKKVVTNLKQERFANTPAYKTAIAEWEIHCNNKTYRLSS
                     LQLFDTKNTEISTQNYTASSLRPMSILSGTLTEKQYETVCGKKL"
BASE COUNT         1807 a         1886 c         1615 g         1781 t
ORIGIN      
        1 cacaacctaa ataaaaatgc cgtctgaacc atatttcagg tttcagacgg catttgcgtg
       61 tcggatgcac accggacagg cggtaagccg ggttctgtct cggacagtca ttcctctagg
      121 cataccgtta ccagtatgct caagcaacct acccgaacgc tcggcgggca gcgtcattgc
      181 gttctgtttg gtcttgctcc gaatggggtt tggcctgccg catattgtta ccaaatgcgc
      241 ggtgcgccct taccgcacct tttcaccctt gcctgtgctg ccaaagcagc catcggcggt
      301 tttgctttct gttccacttt ccgtcgcgtt accgcgcccg gccgttaacc ggcattctac
      361 cctgcggagc ccggactttc ctccccgtat gccttacgcg atacgcggcg actgtctgct
      421 cgtcccgtgt gcggcgcgga ttataacacg aaacgcaaaa atgccgtctg aaacggtaca
      481 ggtttcagac ggcatacagc ctaaactaca cgccctgttt caggctggct tcgataaagc
      541 cgtccaaatc gccatccaat acggctttgg tgttgccgac ttcgtagcct gtacgcaagt
      601 ctttgatacg tgaggaatcc aaaacatacg aacggatttg gctaccccaa cctacatcgg
      661 atttaccttc ttccaacgcc tgtttctctt cattgcgttt gcgcatttcc aattcataca
      721 gtttggactt caacatttcc atcgcggcgg ctttgttggc gtgttgcgaa cggtcgtttt
      781 gacattgcac cacaatcccc gtcggctcgt gggtaatacg cacggcggag tcggttttgt
      841 tgatgtgctg accgcccgcg cccgatgcgc gataggtgtc gatacgcaaa tcggcggggt
      901 tgatttcgat ttcgatggaa tcatcgattt cagggtaaac gaacacggag gcaaacgaag
      961 tatggcgttt gttgttcgag tcaaacggtg aatagcgcac caagcggtga acgccagttt
     1021 cggtacgcag caaaccatag gcgtattcgc cttccactcg gatagtcgcg cggttgatgc
     1081 ccgcgatttc gccgtcgtct tcttcgagga tttcgatttt gaagcctttg cgctcggcgt
     1141 agcggctgta catgcggaac agcatacccg cccagtcttc cgcttccgta ccgcccgcgc
     1201 ctgcggtgat gtcgataaag cagttgttcg ggtcggcggg ctggttgaac atccgtttga
     1261 actccaaatc cgccatctgt ttttccagcc ccgccacatc ttcctgcacg gcggcaaaac
     1321 cttcttcgtc gttttcttcg acggtcattt caatcagcat gcggttgtct tcgatgcccg
     1381 aagcgatgtt gtcgagcgtc aacacgatgc cttcgaggat tttgcgctct ttgccgattt
     1441 cttgggcgcg tttcgggtcg ttccaaagtt cggggtcttc ggaaagaccg ataacttctt
     1501 ccaatcggtc tttcttaccc tgataatcca tataaactcg gatgtcttcg ctgcgctttt
     1561 ccaaatcatt cagggtattg ttgagctggt tgattacttc ggcttccatg attcttttgt
     1621 tctttcaaaa ttttaggggc gtattgtacg ggattcgggt atttttttct atggataaag
     1681 ccttctagaa acacgttcgg acggcatagc gtcaataacg gtatgccgcc agtttgcgtt
     1741 tgatttcagg caatgcggca cgtgctgcct cctcacccaa ctggatggca cgttttttct
     1801 gatcgaatcc gccgactgca cccaaatcca aaacctgcgg tttgataacc acatccgcct
     1861 gccccaactc attttgcaac gcggaaacgc tcattacgtt cagcgtctga tcgagataag
     1921 agaagaagcc ttggctgatg tttttgcccg gacgggcgga aatatcgacg gcaatcacga
     1981 aattcgcccc ctgccgccgg gcggcactga cgggcacggg ctgcgacaga ccgccgtcaa
     2041 catatgtatg cctgccgatg ataacgggtt ggaacacatt gggaatggcg gcggaagcgc
     2101 gcacagcctg cccggcattc ccttgattga aagcgacggc cttgccggtt tcaaaatcag
     2161 tagcaacagc ggcaaatttg atgggaaact gctgaatctg cctgccgccg acttttcggt
     2221 tgatgtaatt ttgcagcttt tcgcctttga taaaaccact ggtggacaag gttaaatcga
     2281 ctaaatcggt tttgcctaaa atttcggctt ccaattcgag gcggtcgggc gacatacccg
     2341 atgcaaaaag gctgccgaca atcgaacctg ccgatgtgcc ggtaaccacc ttcacaggaa
     2401 taccgttttc tttcaaaacc ttaataatac ctacatgggc aaatccttta gatgcgccgc
     2461 caccgagtgc caaaccgacc actgcggcgg gtttggcggt ttgcaccggc ttgcgggcgg
     2521 cattatttcc cgccgtgccg caggcggcaa gcaacgcggc ggcggcgatt gccaaaagcg
     2581 gtctgatttt tgaaaacgtt accatatttt ccattccttt atatatcgca ccccgtcaaa
     2641 aagagggatt gcttttctta acaaccccct ttgacagcca agcaaatgga ggctttgtta
     2701 agtcatcatc aaaattaata tttctttttt tcctttacgg aaattatatt tgaaggcata
     2761 ctatccaagg tgggaattat ctcacaacac cgccgttatc caaatatccc gcctttttcc
     2821 cttcctttcc atcaaaatac tttcttttta tattcattaa cttgttaaat cattggctgc
     2881 cgggtgtcag tttttccgac aaaatccgtc taatggggta tcaacagaac caaaacagga
     2941 acacttatga aaatcggaac aacttggcag acggcatccg ctatgctggt tttgcgtctg
     3001 tttgccgcat atgaattttt ggaatcgggt ttgcaaaaat ggaacgggga gaattggttt
     3061 tctgaaatca acgatcaatt cccattcccg ttcaacttgc tgccggacgc gttaaactgg
     3121 aatctcgcta tgtatgcgga gcttttactg cccgtactgt tgcttttggg tttggcaacg
     3181 cgtctgtcgg cattagggct gatggtcgtt accgccgtcg cttgggctgc ggttcacgcc
     3241 ggttcgggtt acaatgtctg cgacaacggt tataaaatgg ctttaattta tatcgtggta
     3301 ttaatcccgc tgcttttcca gggtgcgggc ggatggtcgc tggatacgct gctgaaaaaa
     3361 cggttttgcc cccaatgccg tctgaagcaa gattgattca gtcgtggaat ctgactttaa
     3421 acattccaac cttatctcgt taacttgata ttctgaaaag gaaatagaaa tgaacaaaaa
     3481 cattgctgcc gcactcgccg gtgctttatc cctgtctttg gccgccggtg cagttgctgc
     3541 caacaaaccg gcaagcaacg caacaggcgt tcataaatcc gcccatggct cttgcggcgc
     3601 gtccaaatct gccgaaggtt cgtgcggcgc ggctggttct aaagcaggcg aaggcaaatg
     3661 cggcgagggc aaatgcggtg cgaccgtaaa aaaaacccac aaacacacca aagcatctaa
     3721 agccaaggcc aaatctgccg aaggcaaatg cggcgaaggc aaatgcggtt ctaaataatc
     3781 ccaccccttc aaaccaagcc gcgtttttca gtaaaatgcg gcttttttaa cggcaaacaa
     3841 agatttttta acaagcacat cattcttttg tgccatccga accgggtaaa aatatgattc
     3901 aacacgcagg cttgggctac cgccgcgact tggcggaaga ctttctctcg ctttccgaaa
     3961 acagcccgat atgctttatc gaagccgcac cggaaaactg gctgaaaatg ggcggctggg
     4021 cgcgcaaaca gtttgaccgt gtggcggaac ggctgccgct ggcgttgcac ggattgtcta
     4081 tgtcgctggg cgggcaagca ccgctggata ctgatttgat agacggcatc aaagaaatga
     4141 tgcgccgtta cgattgcacg tttttctccg accatttgag ctactgccac gacggcggtc
     4201 atctttacga tttgttgccg ctgcccttta ccgaggaaat ggtgcatcat acggcgcggc
     4261 gtatccgcga agtgcaagac cgtttgggct gccgcatcgc cgtggaaaac acgtcctact
     4321 atctgcattc cccgcttgcc gagatgaacg aggtcgagtt cctcaacgcc gtcgcacgtg
     4381 aggccgattg cggcattcat ctggatgtga acaatatcta cgtcaacgcc gtcaatcacg
     4441 gcctgttgtc gccggaggct tttttgaaaa acgttgacgc agatcgcgtg tgctatatcc
     4501 atattgccgg acatgacgtg gaaacgccgg aattgttgat tgatacacat ggcgcggcag
     4561 ttttgccgac tgtttgggac ttgctcgaac ttgcctatgc caagctgccg acgattccgc
     4621 ccaccctgtt ggaacgcgat tttaatttcc cgccttttgc cgaactcgaa gccgaagtcg
     4681 ccaaaatcgc cgattatcaa acgcgtgccg gaaaggaata ccgccgtgca gcctgaaacc
     4741 tccgcccaat accagcaccg tttcgcccaa gccatacgcg ggggcgaagc cgcagacggt
     4801 ctgccgcaag accgactgaa cgtctatatc cgcctgatac gcaacaatat ccacagcttt
     4861 atcgaccgct gctataccga aacgcggcaa tactttgaca gcgaagaatg gagccgtctg
     4921 aaagaaggtt tcgtccgcga cgcgcacgcc caaacgccct attttcaaga aatccccggc
     4981 gagttcctac aatattgcca aagcctgccg cttttagacg gcattttggc actgatggat
     5041 tttgaatata cccaattgct ggcagaagtt gctcaaattc cggatattcc cgacattcat
     5101 tattcaaatg acagcaaata cacaccttcc cctgcggcct ttatccggca atatcgatat
     5161 gatgttaccg atgatttgca tgaagcggaa acagccttgt taatatggcg aaacgccgaa
     5221 gatgatgtga tgtaccaaac attggacggc ttcgatatga tgctgctaga aataatgggt
     5281 tcctccgcgc tttcgtttga caccctcgcc caaacccttg tcgaatttat gcctgaggac
     5341 gataattgga aaaatatttt gcttgggaaa tggtcaggct ggactgaaca aaggattatc
     5401 atcccctcct tgtccgccat atccgaaaat atggaaggca attccccggg ccaaaaccat
     5461 ctatccgcat aaaattacct tgttcccgat actatgccgc tacccgacct gaccgatgcc
     5521 gaattaatag agtcgcgtaa actgcttctg cattttgcgc ggcttcagtt gcccgaccac
     5581 cctgatttgg ctgaagattt agtgcaggaa acattgctgt ccgcatacag cgcaggcgac
     5641 agttttcaag gcagggcact tgtcaacagc tggctttttg ccatattgaa aaacaaaatt
     5701 attgacgcat tacgtcaaat cggaaggcag aggaaagtct ttaccacact ggatgacgag
     5761 ctactggatg aagcatttga aagccatttt tcccaaaacg ggcattggac gccggaaggg
     5821 cagccgcaac attggaacac tccggaaaaa tcattaaaca acaacgaatt ccaaaaaatt
     5881 ctgcaaagct gcctatacaa cctgcctgaa aacaccgcac gggtatttac cctgaaggaa
     5941 atactcggtt tttcatccga cgaaatacaa caaatgtgcg gtatcagcac gtccaactac
     6001 cacaccatta tgcaccgcgc ccgagaatca ttgcgccaat gcctgcaaat caaatggttc
     6061 aaccaagaaa acccgaagta aacgttatga aaaaatgccg cgatatcgcc ctgcttcttt
     6121 ccaaacatca ggaccgggaa accaccccgg gcgagaagat ttccatatac acacacctgc
     6181 tgttctgtcc gtattgccgt gaatataaaa gacaacttca aaccatcaaa agatcactgg
     6241 caaaaacaac cagaacttca aaataaatgc cgtctgaaaa ggcttcagac ggcataagct
     6301 gacggaaaca aatcaaaccg atttactgtt atcggcagtt catccataat acacgcttca
     6361 aaagcagcat attcctccat acggaatata taaatacgca aaacacgaag gctgcatcaa
     6421 tttgctttat ttgccttatt tcacagacgg cgctacccct cccgcccaac ccgttctttc
     6481 tgaatgagca gatttcaatg attaaggaaa ccctaatgcg cccaatcttc ctatctttcg
     6541 ttttactccc tattttgata accgcctgca gcacaccgga caagtctgcc cgatgggaaa
     6601 atatcggcac aatctcaaac ggcaatattc atacatatat caataaagac agcgtgagaa
     6661 aaaacggaaa tctgatgatt ttccaagata aaaaagttgt taccaatcta aaacaagaac
     6721 gttttgccaa cacccccgca tacaagactg ccattgccga gtgggaaatc cactgcaaca
     6781 acaaaacata ccgcttaagt tcgctacagt tgtttgatac aaaaaacacg gaaatttcca
     6841 cacaaaacta cacagcctct tccctccgcc cgatgagcat cctgtccggg acattaaccg
     6901 aaaaacaata tgaaaccgta tgcggaaaaa aactctgatt gcaacttata cacaaactta
     6961 cccacaaacc ttatcataaa aatgccgtct gaaatactga aatatcagca tttcagacgg
     7021 cattttgcca ttccctgaaa attatccaca aagttatcca cattattttt taaaaccggc
     7081 ttccatccg
//
LOCUS       DAWGKF010000106         7077 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.106, whole genome shotgun sequence.
ACCESSION   DAWGKF010000106 DAWGKF010000000
VERSION     DAWGKF010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7077)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7077)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7077
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.106"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..771
                     /gene="mafB"
                     /locus_tag="WHR07_001480"
     CDS             <1..771
                     /gene="mafB"
                     /locus_tag="WHR07_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HEZ2130685.1"
                     /translation="YSNLGSNFSDRADEANRKMFEHNAKLDRWGNSMEFINGVAAGAL
                     NPFISAGEAVDQWMQENPNAAETVEALVNVLPFAKVKNLTKAAKPGKAAVSGDFSAAY
                     NTRTTRKVTTETEGLNRIRQNQKNSNIHEKNYGRDNPNHINVLSGNSIQHILYGDEAG
                     GGHLFPGKPGKTTFPQHWSASKITHEISDIVTSPKTQWYAQTGTGGKYIAKGRPARWV
                     SYETRDGIRIRTVYEPATGKVVTAFPDRTSNPKYNPVK"
     gene            786..1016
                     /locus_tag="WHR07_001481"
     CDS             786..1016
                     /locus_tag="WHR07_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafI family immunity protein"
                     /protein_id="HEZ2130686.1"
                     /translation="MKTLDERIKNLGKSLEDRIDANLIDAALEYITFSERLLAFETLC
                     DYIEDFNIQLTEKESQEISFINKEFGIESTSD"
     gene            1165..1842
                     /locus_tag="WHR07_001482"
     CDS             1165..1842
                     /locus_tag="WHR07_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hint domain-/BECR-fold containing toxin"
                     /protein_id="HEZ2130687.1"
                     /translation="MVKTADGYKAIAHIQAGDRVLSKDEASGETGYKPVTARYGNPYQ
                     ETVYIEISDGIGNSQTLISNRIHPFYSDGKWIKAEDLKAGSRLYSESGKTQTVRNTVV
                     KPKPLKAYNLTVADWHTYFVKGNRAETEGVWVHNECPPRKTPSTPIYGNDSEAYAAAK
                     ELGYRKIKERTRNDAAIFKKGKSYISRDVDSHNGGAWKEASSPEKLNRKETRNGTFDK
                     NLNRIGD"
     gene            1848..2255
                     /locus_tag="WHR07_001483"
     CDS             1848..2255
                     /locus_tag="WHR07_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 41 family protein"
                     /protein_id="HEZ2130688.1"
                     /translation="MCEFKDFRRNIPCFKEYDENSFIGKWYDDGVWDDEEYWKLENDL
                     IEVRKKYPYPMDIPRDIVIGIGTIIDFLMVQNWKLFEIKASPWLPKSVKINERYERFR
                     VMLRYIFTDLDVEDWKFFYFPIQNSKGRLRRKV"
     gene            2277..2654
                     /locus_tag="WHR07_001484"
     CDS             2277..2654
                     /locus_tag="WHR07_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 41 family protein"
                     /protein_id="HEZ2130689.1"
                     /translation="MCEFKDIIRNVPYFEGYDENSFIGKWYDDGVWDDEEYWKLENDL
                     IEVRKKYPYPMDIPRYVVIGIGTIIDFLMVPNWKLFEIKASPWLPDSVGINERYERLK
                     TMLRYIFTEKDIVNVRFDYYNKK"
     gene            2690..3175
                     /locus_tag="WHR07_001485"
     CDS             2690..3175
                     /locus_tag="WHR07_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pretoxin"
                     /protein_id="HEZ2130690.1"
                     /translation="MRLSDGIGNSQTLISNRIHSFYSGGKWIKTEDLKAGIRLLSESG
                     KTQTVRNIVVKPKPLKAYNLTVADWHTYFVKGNRAETEGVWVHNACPPKRTGSSKNEK
                     HGDDGRSQISAESRIAELKNKIIPGMPKNERLKIEQKIKNITKNANRKAKGEEHGRRG
                     R"
     gene            3156..3611
                     /locus_tag="WHR07_001486"
     CDS             3156..3611
                     /locus_tag="WHR07_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130691.1"
                     /translation="MVDAVVKTPEFLPFTSVGIFRFGADITQYKNILETFMYEPPDEF
                     GTEYYESPDSNLLISVEKNKIISIFCYQELYFMGVNIIGLNFEDFKQLFHHPKSYGVD
                     KYYLSNESYPTYVYEFDEIGVQAWEAKGKIVTIIAGGKDNYSTEPYYDE"
     gene            3618..3674
                     /locus_tag="WHR07_001487"
                     /pseudo
     CDS             3618..3674
                     /locus_tag="WHR07_001487"
                     /inference="COORDINATES: protein motif:HMM:NF026864.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3680..4057
                     /locus_tag="WHR07_001488"
     CDS             3680..4057
                     /locus_tag="WHR07_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 41 family protein"
                     /protein_id="HEZ2130692.1"
                     /translation="MCEFKDFRRNIPCFEEYDENSFIGKWYDDGVWDDEEYWKLENAL
                     IEVRRKYPYPMDIPRDIVIGIGTIIEFLMVPNWKLFTIKSSPWLPKSVKIDERYERFR
                     VMLRYIFTEIDIVNVRFDYYNKK"
     gene            4141..4635
                     /locus_tag="WHR07_001489"
     CDS             4141..4635
                     /locus_tag="WHR07_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130693.1"
                     /translation="MENRFKKIVKDILSFAQFVSEAENKIPNQSSRYYDCWWELEILN
                     ASALEDWEISGKPEKWEKWTEKYQTEALQSVKHLFAEEVPENNIVCDISHFLHFADWA
                     EADIPNQSRLYAEYWWEMEMFKMSVLEDWERSGKPLDWKKWQRQYRSEAFELVKKLNR
                     SKQE"
     gene            4755..5888
                     /locus_tag="WHR07_001490"
     CDS             4755..5888
                     /locus_tag="WHR07_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130694.1"
                     /translation="MFKKFKPVLLSFFALVFAFWLGTGIAYEINPRWFLSDTATEVPE
                     NPNAFVAKLARLFRNADRAVVIVKESMRTEESLAETVDDGPLQSEKDYLALAIRLSRL
                     KEKAKWFHVTEQEHGEEVWLDYYIGEGGLVAVSLLQRSPEAFVNAEYLYRNDRPFSVN
                     VYGGTAHRENYETTGEYRVVWQPDGSVFDAAGRGKIGEDVCEHCLGCYQMAQVYLAKY
                     RDVANDEQKVWDFREESNRIASDSRDYVFYQNMRELMPRGMKANSLVVGYDADGLPQK
                     VYWSFDNGKKRQSFEYYLKNGNLFIAQSSTVALKADGVTADIQTYHAQQTWYLDGGRI
                     IREEKQGDRLPDFPLNLENLEKEVRRYAEAAARRSGGRRDLSH"
     gene            complement(5975..6250)
                     /locus_tag="WHR07_001491"
     CDS             complement(5975..6250)
                     /locus_tag="WHR07_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130695.1"
                     /translation="MNEGEVVLTPEQIQTLRGYAFRGDTYGGWRYLANLGDRYADDAA
                     AIVGKDANLNGLNLWMKKGVENLWDDTVGKKTRLMCISVFWIVVFNL"
     gene            complement(6267..7034)
                     /locus_tag="WHR07_001492"
     CDS             complement(6267..7034)
                     /locus_tag="WHR07_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FrpC operon protein"
                     /protein_id="HEZ2130696.1"
                     /translation="MRPYATTIYQLFILFIGSVFTMTSCEPVNEQTSFNNLEPMTGFE
                     HTVTFDFQGIKMVIPYGYLARYTQDNATKWLSDTPGQDAYSINLIEISVYYKKTDQGW
                     VLEPYNQQNKAHFIQFLRDGLDSVDDIVIRKDACSLSTTMGERLLTYGVKKMPSAYPE
                     YEAYEDKRHIPENPYFHEFYYIKKGENPAIITHRNYHRYGENDYSTSVGSCINGFTVR
                     YYPFIREKQQLTQQELVGYHQQVEQLVQSFVNNSSKK"
BASE COUNT         2305 a         1307 c         1564 g         1901 t
ORIGIN      
        1 tacagcaacc tcggcagcaa tttctccgac cgcgccgatg aagccaacag aaaaatgttc
       61 gagcacaatg ccaagctcga ccgctggggc aacagcatgg agtttatcaa cggcgtcgcc
      121 gccggcgcgc tcaacccctt tatcagcgcg ggcgaagccg ttgaccagtg gatgcaggaa
      181 aaccccaatg ccgccgaaac cgtcgaagcc ctggtcaacg tcctgccgtt tgccaaagtc
      241 aaaaacctga caaaggcggc aaaaccgggg aaggctgcgg ttagcgggga tttttctgct
      301 gcatacaata caagaacaac tagaaaagtt actacagaaa cagaggggtt aaatagaatc
      361 agacagaacc agaaaaatag taatatacat gagaaaaatt atggaagaga taatcctaat
      421 catattaatg ttttatctgg aaattctata caacatatac tgtatggaga tgaagcagga
      481 ggtgggcatc tttttcctgg caaacctggt aagacaacat tcccccaaca ttggtcagcc
      541 agtaaaataa ctcatgaaat tagtgatatc gttacatccc caaaaacgca atggtatgca
      601 cagactggaa caggcggcaa atatattgct aaaggaagac cagccaggtg ggtatcatat
      661 gaaacgagag atggaattcg tatcagaaca gtttatgaac ctgcaacagg aaaagtggta
      721 actgcattcc ccgatagaac ctctaatccc aaatataacc ctgtaaaata atgagtattt
      781 gaaagatgaa aacattagac gaacgaataa aaaatttagg aaaatctctt gaagatagaa
      841 ttgacgctaa tctaattgat gccgcactag agtacattac tttttcagaa cgtttgctag
      901 cttttgaaac gctatgtgat tatatagaag atttcaatat ccagcttacg gaaaaagaat
      961 cccaagaaat ctcttttatt aataaggaat ttggaattga aagtacatca gattaataaa
     1021 tattaggtcg gtttaaaaac ccaacaatca aaaagtcgtc tgaaactgtg tttaatttac
     1081 agacgacctt tccttcattt gaagcaggat attgagaact gagttcttca aaaatcctac
     1141 acctgctcct tccacggcag caccttggtc aaaacggcag acggctacaa agccattgcc
     1201 catattcaag ccggagaccg cgtcctttcc aaggacgagg caagcggaga aacgggatac
     1261 aaacccgtta ccgcccgata cggcaatccc tatcaagaaa ccgtttacat tgaaatttca
     1321 gacggcatcg gcaacagtca aaccctgatt tccaaccgca tccatccgtt ttattcggac
     1381 ggcaaatgga ttaaggcgga agatttaaaa gcgggaagca ggctgtattc cgaaagcggc
     1441 aaaacccaaa cagtccgcaa caccgttgtc aaaccaaaac cgctcaaagc ctacaatctg
     1501 accgttgccg attggcatac ttactttgtc aagggcaatc gggcggaaac ggaaggggtt
     1561 tgggttcata atgagtgtcc gccaagaaaa acaccatcta cccccatata tgggaatgat
     1621 tcagaagcat atgcagcagc aaaggaattg ggatatagaa aaataaaaga aagaacgaga
     1681 aatgatgctg ctatttttaa aaaaggaaag agttatatat cacgcgatgt agattcacat
     1741 aatggaggtg cttggaaaga ggcatcttca cccgaaaaac tgaacagaaa agaaacaaga
     1801 aacggtacat ttgataaaaa cctaaatcgt attggagatt aattattatg tgcgagttca
     1861 aggattttag aagaaacatc ccttgtttta aggagtatga cgaaaattca tttattggca
     1921 aatggtatga tgacggggtg tgggatgatg aagaatattg gaaattggag aatgatttaa
     1981 ttgaggttag aaaaaaatat ccttatccga tggatatacc aagggacatc gtgattggaa
     2041 tcggtaccat tattgatttt ttaatggttc aaaattggaa actttttgaa attaaagctt
     2101 ctccttggtt gcctaaaagt gtcaaaatta atgagcgtta tgaaaggttc agggtaatgc
     2161 tccgttatat ttttactgat ctagatgtag aggactggaa atttttttac tttccaatac
     2221 aaaatagtaa aggtagattg agacgaaaag tttaattata ttggagatac attattatgt
     2281 gtgagttcaa ggatattata agaaacgttc cttattttga ggggtatgac gaaaattcat
     2341 ttattggcaa atggtatgat gacggggtgt gggatgatga agaatattgg aagttggaga
     2401 atgatttaat cgaggttaga aaaaaatatc cttatccgat ggacatacca agatatgttg
     2461 tcattggaat cggtaccatt attgatttct taatggttcc aaattggaaa ctttttgaaa
     2521 ttaaagcttc cccttggcta cctgatagcg tgggaattaa cgaacgttat gaaaggctta
     2581 aaacaatgct ccgttatatt tttaccgaga aagacatagt caacgtgcga tttgattatt
     2641 acaacaaaaa atagcaaaac ccggcaatca aaatgccgtc tgaagcgata tccggctttc
     2701 agacggcatc ggcaacagcc aaaccctgat ttccaaccgc atccactcgt tttattcggg
     2761 cggcaaatgg attaagacgg aagatttgaa agcgggaatc aggctgttat ccgaaagcgg
     2821 caaaacccaa accgtccgca acatcgttgt caaaccaaaa ccgctcaaag cctacaatct
     2881 gaccgttgcc gattggcata cctactttgt caaaggcaat cgggcggaaa cggaaggagt
     2941 ttgggttcat aatgcgtgtc cgcccaaaag aacaggaagc tccaagaatg aaaaacatgg
     3001 agacgacggt cgaagtcaaa tatcagcgga atcaagaatt gctgaattaa aaaataaaat
     3061 tattcccgga atgcccaaaa atgaacgctt aaagattgag caaaaaatca aaaatattac
     3121 aaaaaatgcc aatcgaaaag caaaaggaga agagcatggt cgacgcggtc gttaaaactc
     3181 ccgaattttt accttttact tctgtaggaa tattccgttt tggtgctgat ataacacagt
     3241 acaaaaacat actggaaact tttatgtatg aacctcctga tgagtttgga acagaatatt
     3301 atgaatctcc cgactcaaat ttactcattt ccgtcgaaaa aaacaaaatt atttcgatat
     3361 tttgttatca ggagctatat tttatgggcg ttaatataat aggtctgaat tttgaagatt
     3421 ttaaacagct tttccatcac cctaaatcat acggtgttga taaatattat ttatcaaatg
     3481 aatcttatcc gacatatgtc tatgagtttg atgaaatagg agtacaagct tgggaagcaa
     3541 aagggaaaat tgttactatc attgccgggg gcaaagacaa ttattcgaca gaaccttact
     3601 acgatgaata acattacaga aaagaaacaa gaaacggtac atttgataaa aacctaaatc
     3661 gtattggaga ttaattatta tgtgcgagtt caaggatttt agaagaaaca tcccttgttt
     3721 tgaagagtat gacgaaaatt catttattgg caaatggtat gatgacgggg tgtgggatga
     3781 tgaagaatat tggaaattgg agaatgcttt aatcgaggtt aggagaaaat atccttatcc
     3841 gatggatata ccaagggata tcgtgattgg aatcggtacc attattgagt ttttaatggt
     3901 tccaaattgg aaacttttta caattaaatc ttccccttgg ttgcctaaaa gtgtcaaaat
     3961 tgatgagcgt tatgaaaggt tcagagtaat gctccgttat atttttaccg agatagacat
     4021 agtcaacgtg cgatttgatt attacaacaa aaaatagcaa aacccggcaa tcaaaatgcc
     4081 gtctgaaacc gtgtttgatt tttgacgaca ttttcctcat tggaggggcg gcaattattt
     4141 atggaaaata gatttaaaaa aatcgttaag gatattctta gttttgccca atttgtttcc
     4201 gaagcggaaa ataaaattcc taaccaatcc tctcgttatt acgattgctg gtgggaattg
     4261 gaaatcttga atgcttccgc attggaagat tgggaaatat cgggaaagcc tgaaaaatgg
     4321 gagaaatgga cagaaaaata tcagaccgaa gcgttacagt cagtcaagca tctatttgcc
     4381 gaagaagttc ctgaaaataa tatagtttgc gatatttctc attttttgca ttttgccgat
     4441 tgggcagaag ccgacattcc caatcaatca cgtttatatg ccgaatattg gtgggaaatg
     4501 gaaatgttca aaatgtcggt tttagaagat tgggaacgct cgggaaaacc gttagattgg
     4561 aaaaaatggc aaaggcaata tcgatctgaa gcatttgaat tagttaaaaa attgaaccga
     4621 agcaaacaag agtaacaagc cgcagcctgc ataagggttt ttaaagtacg gcagcaaccg
     4681 tagattaaat taaaaatcaa acaatcaaag ctcgtctgat ataatcgata tattctgtta
     4741 aacgaaaaat aaatatgttt aaaaaattca aaccggtact gttgtcattt tttgcacttg
     4801 tatttgcctt ttggctggga acgggtattg cctatgagat taatccgcgt tggtttttga
     4861 gcgatacggc aactgaagta cctgaaaatc cgaatgcttt tgtggcgaaa cttgcccgcc
     4921 tgttccgaaa tgccgacagg gcggttgtca tcgtgaagga atcgatgagg acggaggaaa
     4981 gtcttgccga aactgtggat gacggtccgt tgcagtcgga gaaggattat ctcgcgctcg
     5041 ctatccggct cagtcgtttg aaagaaaagg cgaaatggtt tcacgtaacg gagcaggaac
     5101 atggggaaga ggtttggctg gattactata tcggcgaggg cggtttggtt gcggtttcgc
     5161 ttttgcaacg ctcgccggaa gcgtttgtta atgccgaata tctgtatcgg aacgatcgtc
     5221 cgttttctgt aaatgtgtac ggcggaacgg ctcacaggga aaattatgaa acgacaggag
     5281 aatatcgggt tgtttggcaa ccggacggtt cggtatttga tgcggcaggg cgcgggaaaa
     5341 tcggggaaga tgtttgtgag cattgcctcg ggtgttatca gatggcccag gtatatttgg
     5401 cgaaataccg ggatgtcgcg aatgatgagc agaaggtttg ggacttccgc gaagagagca
     5461 accggattgc atcggactcg cgcgattatg tgttttatca gaatatgcgg gaattgatgc
     5521 cccgggggat gaaggcaaac agtcttgtgg tcggctatga tgcggatggt ctgccgcaga
     5581 aagtctattg gagtttcgac aatggaaaaa aacgccagag tttcgaatat tatttgaaaa
     5641 acggaaatct ttttattgca caatcttcga cggtagcatt gaaagcggat ggcgtaacgg
     5701 cggatataca gacctatcat gcgcaacaga cgtggtattt ggatggcggg cggattatcc
     5761 gcgaagagaa acagggagac agactgcctg attttccttt gaacttggaa aatttggaaa
     5821 aagaggtgcg ccgttatgca gaggctgcgg cgagacgttc gggcggcagg cgcgaccttt
     5881 ctcactgaac gcaaatgccg tctgaaaccg gttttcagac ggcattggag agtcaaacgc
     5941 tttttgcaat gccgtatatg ccgaatccga ttcgctacaa attgaaaaca acaatccaaa
     6001 aaacggaaat acacattaaa cgggtctttt taccgaccgt atcatcccat aggttttcca
     6061 cacctttttt catccataaa ttcaaaccat ttaagtttgc atccttaccg acaattgcag
     6121 cagcatcatc cgcataacgg tcacccaaat tagccaaata acgccaaccg ccataggtat
     6181 cgccacggaa agcataacca cgcaaggttt ggatttgttc tggtgttaaa acaacttcac
     6241 cctcattcat aataagatcc tttaaattat tttttacttg aattgtttac aaaactctgt
     6301 accaattgct ctacttgttg gtgataacct accaactcct gctgtgtgag ctgctgcttt
     6361 tcccgaataa acgggtaata ccgtaccgtg aaaccgttaa tacaggaacc tacgctagtg
     6421 ctgtaatcgt tctctccata cctatgatag ttccgatgag taataatcgc cggattttct
     6481 ccttttttaa tatagtaaaa ttcatgaaaa tatggatttt caggaatatg tcttttatct
     6541 tcataagcct cgtattcagg ataggcagat ggcatttttt taaccccgta agtaagcaat
     6601 ctttctccca tagtcgtgct taaactacac gcatcttttc ggataacaat atcgtccacg
     6661 ctatccaaac cgtcgcgtag aaattggata aagtgcgctt tgttttgctg gttgtatggc
     6721 tcaagaaccc agccttggtc ggtttttttg taatagacgc taatctctat caaattaatg
     6781 gagtaagcat cctgcccggg cgtgtcggaa agccattttg tggcattgtc ttgcgtatac
     6841 cgtgcaagat agccataagg gataaccatt ttgatgccct gaaaatcaaa tgtaaccgta
     6901 tgttcaaatc ctgtcattgg ctcgagattg ttgaaactgg tttgttcatt aacaggttca
     6961 catgaggtca tagtaaaaac actcccaata aacaaaataa aaagttgata aatggtagta
     7021 gcatatggtc tcataatttc aagcttagaa attagttaaa gaatatattc atggtag
//
LOCUS       DAWGKF010000107         7007 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.107, whole genome shotgun sequence.
ACCESSION   DAWGKF010000107 DAWGKF010000000
VERSION     DAWGKF010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7007)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7007)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7007
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.107"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(75..1496)
                     /locus_tag="WHR07_001493"
     CDS             complement(75..1496)
                     /locus_tag="WHR07_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HEZ2130697.1"
                     /translation="MRHLPLFSLMLFPASVYAADLDGANLNLLWSLPFALILLSIALG
                     PLFFSHTWHHHYGKITAFWTLLFLIPFSLVFGASAGIHTVAHALVEEYIPFILLLLAL
                     YTISGGILVWGDLNGTPKLNTALLAVGTALASIMGTTGAAMLMIRPLLKANQNRTRRV
                     HIVIFFIFLVANIGGGLTPLGDPPLFLGFLKGVDFMWTVKHMFAPVLISTAVLLTAFY
                     FIDNRFFKQESIAQDTPAQQEKPEKIAIFGKWNFLLLSGVVGAVLMSGLWKPEHPGFE
                     ILGSRYALQNLVRDVILIALTAVSMAITPKQVRAGNEFNFEPIAEVGKLFLGIFITIF
                     PVLSILKAGEAGALGGVVSLVHDTAGHPINTMYFWMSGILSAFLDNAPTYLVFFNMAG
                     GDAQALMTGTLFHSLLAVSMGSVFMGALTYIGNAPNFMVKAIAEQRGVPMPTFFGYMM
                     WSVAFLTPVFIVHTLIFFVFKLL"
     gene            complement(1511..1801)
                     /locus_tag="WHR07_001494"
     CDS             complement(1511..1801)
                     /locus_tag="WHR07_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter"
                     /protein_id="HEZ2130698.1"
                     /translation="MQIYVKINSFFVFDRLFIKDIYLFVLNKIIYQKEHIFPSTAIRL
                     PAAFRFGKLVYPDYLLYNQSENFFQKQTGSTVRLCPGGTVPVSLPRAAQGSA"
     gene            complement(1854..2213)
                     /locus_tag="WHR07_001495"
     CDS             complement(1854..2213)
                     /locus_tag="WHR07_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HEZ2130699.1"
                     /translation="MIRYLLIACGCISLLLGIIGIFLPLLPTTPFVLLSAACWAKASP
                     RFHRWLHRHRYFGPMVHNWEQNGAVPRKAKIFAISMMTASCLIMFWQFPQRWWVGAVS
                     SVFCSLVAIWMWRRPES"
     gene            complement(2210..2815)
                     /locus_tag="WHR07_001496"
     CDS             complement(2210..2815)
                     /locus_tag="WHR07_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1415 domain-containing protein"
                     /protein_id="HEZ2130700.1"
                     /translation="MTIMNINTSENKDAVAEHTGQWLEKAVIGLNLCPFAKAPHVKNL
                     VRIAISEAKHLDSFLEDLDEELQRLGNTPATELETTLLVHPTLFPDFDVFNDMLDIAD
                     AAVIENGLEGIVQIAPFHPQFRFQNTEPDDIGNYTNRSPYPTLHLIREDSIAKAAQAF
                     PDASAIFERNIALLEKMGHEGWAKLGITSCPYPHNKKNISK"
     gene            complement(2862..3344)
                     /locus_tag="WHR07_001497"
     CDS             complement(2862..3344)
                     /locus_tag="WHR07_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEZ2130701.1"
                     /translation="MPQLTLDKTDIKILQVLQENGRLTNVELSERVALSPSPCLRRLK
                     QLEDAGIVRQYAALLSPESVNLGLQAFIRVSIRKAKDAREDFAASVRKWPEVLSCFAL
                     TGETDYLLQAFFTDMNAFSHFVLDTLLSHHGVQDAQSSFVLKEIKHTTSLPLNHLLKE
                     "
     regulatory      3548..3645
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            3856..4956
                     /gene="gcvT"
                     /locus_tag="WHR07_001498"
     CDS             3856..4956
                     /gene="gcvT"
                     /locus_tag="WHR07_001498"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HEZ2130702.1"
                     /translation="MITLKTTPFHQAHQDAGAKPVDFAGWELPIHYGSQIAEHEAVRT
                     DAGMFDVSHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLI
                     VYRTNEAETQYRIVSNGATREKDTAQFHKVGQEFGVSFNPRYDLGMLAVQGPKAIEKL
                     LTVKPEWADVVHNLKPFQGADLGNDWFVARTGYTGEDGVEVILPGTEAVAFFKALQAA
                     GVQPCGLGARDTLRMEAGMNLYGNDMDDDTSPLEAGMGWTVDLKDESRDFVGKAALLA
                     LKEKGVAVKQVGLLLGKGGILRAHMEVLTDKGKGETTSGVFSPSLKQSIAIARVPKDF
                     DGDTAKVLIRGKEADVRVLKLPFVRNGQKQFD"
     gene            5119..5505
                     /gene="gcvH"
                     /locus_tag="WHR07_001499"
     CDS             5119..5505
                     /gene="gcvH"
                     /locus_tag="WHR07_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HEZ2130703.1"
                     /translation="MSSNIPAELKYVASHEWLRLEEDGIITVGITHHAQELLGDIVFV
                     ELPEVGANLAAEEQAGVVESVKAASDVYAPIAGEVVAVNEDLPSAPETANSDPYGAGW
                     FFKLKPANVADYDVLLTAEQYAGEVD"
     gene            5657..6904
                     /locus_tag="WHR07_001500"
     CDS             5657..6904
                     /locus_tag="WHR07_001500"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HEZ2130704.1"
                     /translation="MQLTAVGLNHQTAPLSIREKLAFAAACLPEAVRNLARSNAATEA
                     VILSTCNRTELYCVGDSEEIIRWLADYHSLPIEEISPYLYTLGMQETVRHAFRVACGL
                     DSMVLGEPQILGQIKDAVRVAQEQESMGKKLNALFQKTFSVAKEVRTDTAVGENSVSM
                     ASASVKLAEQIFPDIGDLNVLFIGAGEMIELVATYFAAKSPRLMTVANRTLARAQELC
                     DKLGVNAEPCLLSDLPAILHEYDVVVSSTASQLPIVGKGMVERALKQRQSMPLFMLDL
                     AVPRDIEAEVGDLNDAYLYTVDDMVNIVQSGKEARQKAAAAAETLVSEKVAEFVRQQQ
                     GRQSVPLIRALRDEGEKARKQVLENAMKQLAKGATAEEVLERLSIQLTNKLLHSPTQT
                     LNKAGEEDKDLVHAVAQIYHLDK"
BASE COUNT         1783 a         1676 c         1974 g         1574 t
ORIGIN      
        1 tgtcggaagg ggggatattg atttgattat gccggaattt aaaatgccgt ctgaatgttc
       61 agacggcata gcgtttacag cagtttgaaa acgaaaaaga taagggtatg tacgatgaag
      121 acgggtgtca ggaaggcgac cgaccacatc atatagccga agaaagtcgg catcggtacg
      181 ccgcgctgtt cggcaatggc cttgaccatg aagttcggtg cgttgccgat gtaggtcagt
      241 gcgcccatga ataccgaacc catagaaacc gccagcagcg aatgaaacag ggtacccgtc
      301 atcaaggctt gggcatcgcc gcccgccata ttgaaaaaaa cgagataagt gggcgcgtta
      361 tccaagaatg ccgacaatat gccgctcatc caaaaataca tcgtattaat cggatgacct
      421 gccgtatcgt gaaccagcga taccaccccg cccagcgcgc ctgcctcgcc tgctttcaga
      481 atgctcagga cgggaaagat ggtgatgaag atgccgagga agagtttgcc cacttcggcg
      541 atgggttcaa agttgaattc gttgcctgcg cggacttgtt tgggcgtgat tgccatagat
      601 acggcggtca atgcaatcag gatgacatcg cggacgaggt tttgcagggc gtaacggctg
      661 ccgaggattt caaatcccgg gtgttcgggt ttccaaaggc cggacattag aaccgcgccg
      721 accacgcccg aaagcaggag gaagttccat ttgccgaaga tggcgatttt ttcgggtttt
      781 tcctgttgtg ccggcgtatc ttgtgcaatg ctttcctgtt tgaagaaacg gttgtcgatg
      841 aaatagaagg cggtcaacag gacagcggtg ctgatcagga cgggggcgaa catatgtttg
      901 accgtccaca tgaaatctac gcctttgagg aagccgagga agagtggggg gtcgcccaaa
      961 ggggtcagac cgccgccgat gtttgcaacc aggaaaatga agaagatgac gatgtgcacg
     1021 cggcgggtac ggttttggtt ggctttcagc agcggacgaa tcatcagcat tgctgcgccg
     1081 gtcgttccca tgatagaggc aagtgccgta ccgacggcaa gcagggcggt gttgagcttg
     1141 ggtgtgccgt tcaagtcgcc ccaaaccaaa atgccgcctg aaatggtgta cagggcaagc
     1201 agcagcagga tgaaggggat gtattcttca acgagtgcgt gtgcgacggt atggataccg
     1261 gcggacgcgc caaaaaccaa actgaacggg atgaggaaga gcaatgtcca aaaggcggtg
     1321 attttgccgt aatggtgatg ccaggtatgc gaaaaaaaca agggacccaa tgcgatagac
     1381 agcaaaatca gggcaaaggg caggctccac agcaggttta ggtttgcgcc gtccaaatct
     1441 gcggcgtaaa ccgatgcggg gaaaagcatt agtgaaaaca ggggtaggtg gcgcatcgtg
     1501 tttcctcgat tcaagcactg ccttgcgcgg cgcgtgggag tgatacaggc accgtgccgc
     1561 ccggacatag gcggactgtg ctgcctgttt gtttttgaaa aaagttttcc gattgattgt
     1621 aaagtaaata atcaggataa accagtttcc caaaccggaa ggcggcggga aggcggattg
     1681 ctgtgcttgg gaatatatgt tctttttgat aaataatttt atttaaaaca aataaatata
     1741 tgtctttaat aaataatcta tcgaaaacga aaaatgaatt tattttaaca tatatttgca
     1801 atgaaacagg tttgcccccc gtttgtttgc ccttatccct ttcagtacgg cattcaagat
     1861 tcgggcctgc gccacatcca tatggcgaca agggaacaaa aaaccgatga aaccgccccg
     1921 acccaccagc gttggggaaa ctgccaaaac attatcaggc aggatgcggt catcatactg
     1981 atggcgaata ttttggcttt gcgcggcact gcgccgtttt gttcccagtt atgaaccatc
     2041 ggaccgaaat agcggtgccg gtgcagccag cggtgaaagc gcggggatgc ctttgcccag
     2101 caggcggcgg agagcagtac gaacggcgtg gtcggcaaca gcggcaaaaa aatgccgatg
     2161 atacccaaca gcagggagat gcagccgcag gcaattaaaa gataacgtat cattttgaaa
     2221 tatttttctt attgtgcgga taagggcagg atgtgatacc gagttttgcc cagccttcat
     2281 gtcccatttt ttccagcagg gcgatattgc gttcgaatat tgccgaagcg tcgggaaagg
     2341 cttgtgcggc tttggcaatg ctgtcttcgc ggatgaggtg cagcgtcgga tagggagaac
     2401 ggttggtgta gttgccgatg tcgtcgggtt cggtattctg aaagcggaat tggggatgga
     2461 acggtgcgat ttggacgatg ccttccaagc cgttttcgat aacggcggca tcggcaatat
     2521 cgagcatatc gttgaatacg tcgaaatcgg ggaatagggt cgggtgaacc agcagggtgg
     2581 tttccagttc ggtggcgggt gtattgccca gtcgctgcag ttcttcgtcc aagtcttcca
     2641 aaaaactgtc aaggtgtttg gcttcgctga ttgcgatgcg gacaaggttt ttaacgtggg
     2701 gggctttggc aaagggacac aggttcagac cgatgacggc tttttccaac cattgtccgg
     2761 tgtgttcggc aacagcatct ttattttcgg aagtattgat attcattatt gtcatgtaaa
     2821 tgtgtttgca gattgcacgt gcgggaaaat cgggaagggc actattcctt cagcaggtgg
     2881 ttgagcggca gggaggtggt gtgtttgatt tcttttaaaa caaagctcga ttgcgcatct
     2941 tgtacgccgt ggtgggacag gagcgtatcc aaaacaaaat gggaaaacgc gttcatatcg
     3001 gtaaaaaacg cctgaagcag gtagtcggtt tcccctgtca gggcgaagca gctcaagact
     3061 tcaggccatt ttcgaaccga tgcggcaaag tcttcccgcg cgtcttttgc tttgcggatg
     3121 gaaacgcgga taaatgcctg aagccccagg ttgacggatt ccggagacag cagcgcggca
     3181 tattggcgga cgatgccggc atcttccaac tgcttcagac ggcgcaggca cggagaaggc
     3241 gaaagtgcga cacgttcgga cagttcgaca ttggtcagcc tgccgttttc ctggagaacc
     3301 tgtaagattt taatatcggt tttgtctaaa gtgagttggg gcatatttgc gttccgtttt
     3361 aaggaattcg gattgtctgt ccgtatgttt gcggcaatcc gcacagatgg agaccatatt
     3421 aacatataaa aagttatacc gtcatccggg acaaattttg ttttcggaaa atcatgtgaa
     3481 aacagaggcg gtcggtttgc atctctttta agacggcttg cccaaaccgc cgattcaaga
     3541 cataatcggg aaatgtgcag gagagtgtta cacccaacta caatgtaacc accgaaggcg
     3601 cagacaccct taaatcgctc aggtatcagg gactgcacat tgaaacaaac aatctggaga
     3661 gcggcgttgg aataacgtcc accgaagggg agaaggccgt ctgaaccacc attcagacaa
     3721 ccgcgcaaag cagtgagcag actggtttgc catcatgcgg atacggccga aaatctcagg
     3781 ttcaaggaca gatagggtca tccgcgcata ggtgcgcggg tggcatctga acaaaaaatc
     3841 cggagaaact tgagaatgat tactctgaaa accaccccat ttcatcaagc ccatcaagat
     3901 gcaggcgcga agccggtaga ttttgccggc tgggagctgc ccatccatta tggttcgcaa
     3961 atcgccgaac acgaagccgt gcgcaccgac gccggtatgt ttgacgtatc ccatatgctt
     4021 gttaccgacg tagcaggcgc aaatgccaaa gcctttttcc gcaaattgat tgccaacgat
     4081 gtcgccaagc tcgcttttgt cggcaaagcc ctttattccg ctttgctcaa cgacaacggc
     4141 ggcgtgattg acgacttgat cgtttaccgc accaatgaag ccgaaaccca ataccgcatc
     4201 gtgtccaacg gcgcgactcg cgaaaaagat acggcacaat tccacaaagt cggacaagag
     4261 ttcggtgttt ccttcaatcc gcgctacgac ctcggcatgc tcgccgtaca aggccctaaa
     4321 gccattgaaa aactcctgac cgtcaaaccc gaatgggcag atgtcgtcca taacctcaaa
     4381 ccgttccaag gcgcggattt gggcaacgac tggtttgtcg cccgcaccgg ctacaccggc
     4441 gaagacggcg tcgaagtcat cctgcccggc accgaagccg tcgcattctt caaagccctg
     4501 caagcagcag gcgtacaacc ttgcggtctc ggcgcgcgcg acaccctgcg catggaagcc
     4561 ggcatgaacc tctacggcaa cgatatggac gacgatacca gcccgctcga agcaggcatg
     4621 ggttggaccg ttgatttgaa agacgaaagc cgcgattttg tcggcaaagc tgccttgttg
     4681 gcattgaaag aaaaaggcgt tgccgtcaaa caggtcggtt tgctgctcgg caaaggcggc
     4741 atcctgcgcg cgcatatgga agtgttgacc gacaaaggca aaggcgaaac caccagcggc
     4801 gtattctctc caagtctgaa acaatccatc gccatcgccc gcgtaccgaa agattttgac
     4861 ggcgataccg ccaaagtgct gattcgcggc aaggaagcgg acgtgcgcgt actgaagctg
     4921 ccgttcgtcc gcaacggtca aaaacagttt gattaatatc ggttcagacg gcattttcat
     4981 ttcatatgcc gtctgaaagc aggttttaat tgtcgtccga tacggacgtt tgtagaaagc
     5041 attgaacaag gcatctgtgg atattgattc atgcagatgc cgtctgaaaa taacccccta
     5101 tcaatggagt atcaaaccat gagcagcaac atcccggcag aactgaaata cgttgccagc
     5161 cacgaatggc tgcgccttga agaagacggt atcatcaccg tcggtattac ccaccacgcg
     5221 caagagctgt tgggcgacat cgtgtttgtc gagctgcctg aagtcggcgc aaaccttgcc
     5281 gccgaagaac aagccggtgt ggttgagtct gtaaaagccg cgtccgacgt gtacgcaccg
     5341 attgcaggtg aagtcgttgc cgtcaacgaa gatttgccaa gcgctccgga aactgccaac
     5401 agcgatcctt acggtgcagg ctggttcttc aaactcaaac cggcaaacgt tgccgattac
     5461 gacgttctgc tgactgccga acaatacgcg ggcgaagtgg attaaaccgc ccggctgccc
     5521 gatggcaacc gccggacaaa cggaaactgc accttcagac ggcatttttg cggtcggagg
     5581 tgcagttttt tgtccgtgtt ttaaggaagc agttaggcta taataacggt ctatattcat
     5641 ctttaccgat tttttcatgc aacttaccgc tgtcggactc aatcatcaaa ccgcaccttt
     5701 aagcatacgg gaaaagctgg cgtttgccgc ggcctgcctg cccgaagccg tccgcaatct
     5761 tgcccgaagc aatgcggcaa cggaggcggt aatcctttct acctgcaacc gtaccgagct
     5821 ttactgtgta ggtgattcgg aagaaatcat ccgttggctc gcagactatc acagccttcc
     5881 catagaagaa atcagcccct acctttatac tttggggatg caggagactg tgcgccatgc
     5941 tttccgcgtc gcctgcggct tggattcgat ggtgttgggc gagccgcaga ttttaggaca
     6001 gattaaggat gcggtcaggg ttgctcaaga gcaggaaagt atgggtaaga aactcaatgc
     6061 cctgttccaa aaaacctttt ctgttgctaa agaggtccgt accgatactg ccgtcggcga
     6121 aaactcggtt tccatggctt ccgcttccgt caagttggca gagcagattt tccccgacat
     6181 cggcgatttg aatgtcttgt ttatcggtgc gggtgagatg attgagctgg ttgccactta
     6241 ttttgccgcc aaaagtcccc ggctgatgac ggttgccaac cggacgctgg cgcgtgcaca
     6301 ggagttgtgc gacaagctcg gtgtcaacgc cgaaccgtgc ctgctgtccg atctgcctgc
     6361 cattttgcat gagtacgacg tggtggtttc ttcaacggca agccagttgc ccattgtcgg
     6421 caaaggtatg gtggagcgcg cattgaaaca aaggcagagt atgccgttgt ttatgcttga
     6481 cttggccgtg ccgcgagaca ttgaggcgga agtcggagat ttgaacgatg cctatcttta
     6541 tacggtggac gatatggtca atatcgtcca aagcggcaag gaggcaaggc agaaggccgc
     6601 cgccgccgcc gaaacgctgg tgtccgagaa ggttgccgaa tttgtcaggc agcagcaggg
     6661 caggcagagt gtcccgttaa tcagggcatt gagggatgag ggagagaaag cgcgcaaaca
     6721 ggtcttggaa aatgcgatga aacagcttgc caaaggcgca acggcagaag aggttttgga
     6781 aaggctgtcg atccaactga ccaacaagct gctgcattcg ccgacccaaa ccttgaataa
     6841 ggcgggggaa gaagataaag atttggttca cgccgtcgcg cagatttatc atttggacaa
     6901 ataacggtgc gccggaaaag gatgccgtct gaaggggttt cagacggcat tttttgtgca
     6961 ggccggcaac atcgtgaaat cccacattat atcgatgtaa tcacaaa
//
LOCUS       DAWGKF010000108         6971 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.108, whole genome shotgun sequence.
ACCESSION   DAWGKF010000108 DAWGKF010000000
VERSION     DAWGKF010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6971)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6971)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6971
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.108"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            337..636
                     /locus_tag="WHR07_001501"
     CDS             337..636
                     /locus_tag="WHR07_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HEZ2130705.1"
                     /translation="MQRCFNWFDHYCRRLEKYFRRCSIMETWVQNYTAIGGSLYLTAA
                     AALLPIVFFFAALTVLKLKGYQAGLYTLLIALAVAVFGFGMPAGMAVSSLPPQPH"
     gene            576..812
                     /locus_tag="WHR07_001502"
     CDS             576..812
                     /locus_tag="WHR07_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ2130706.1"
                     /translation="MRLRDAGGYGGFFPAAAAALTQRPYATLDLTAHYKIGKSTRIGL
                     DFENVFNKRYRPMPDIHVYGTPRSLTATVKHIVD"
     gene            complement(1004..2407)
                     /gene="mtrE"
                     /locus_tag="WHR07_001503"
     CDS             complement(1004..2407)
                     /gene="mtrE"
                     /locus_tag="WHR07_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit MtrE"
                     /protein_id="HEZ2130707.1"
                     /translation="MDTTLKTTLTSVAAAFALSACTMIPQYEQPKVEVAETFKNDTAD
                     SGIRAVDLGWHDYFADPRLQKLIDIALERNTSLRTAVLNSEIYRKQYMIERNNLLPTL
                     AANANGSRQGSLSGGNVSSSYKVGLGAASYELDLFGRVRSSSEAALQGYFASTANRDA
                     AHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREETYKLSELRYKAGVISAVALRQQE
                     ALIESAKADYAHAARSREQARNALATLINQPIPEDLPAGLPLDKQFFVEKLPAGLSSE
                     VLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTGTVGTGSAELGGLFKSGTGVWS
                     FAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESAVQSAFQDVANALAAREQLDKAY
                     DALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSSYSAEGAALSAQLTRAENLAD
                     LYKALGGGLKRDTQTDK"
     gene            complement(2462..5665)
                     /gene="mtrD"
                     /locus_tag="WHR07_001504"
     CDS             complement(2462..5665)
                     /gene="mtrD"
                     /locus_tag="WHR07_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MtrD"
                     /protein_id="HEZ2130708.1"
                     /translation="MAKFFIDRPIFAWVISIFIIAAGIFGIKSLPVSQYPSVAAPTIT
                     LHATYPGASAQVMEDSVLSVIERNMNGVEGLDYMSTSADSSGSGSVSLTFTPDTDENL
                     AQVEVQNKLSEVLSTLPATVQQYGVTVSKARSNFLMIVMLSSDVQSTEEMNDYAQRNI
                     VPELQRIEGVGQVRLFGAQRAMRIWVDPKKLQNYNLSFADIGSALSAQNVQISAGSIG
                     SLPAVRGQTVTATVTAQGQLGTAEEFGNVILRANTDGSNVYLKDVARVGLGMEDYSSS
                     TRLNGVNTTGMAVMLSNSGNAMATAKAVKERMATLEKYFPQGMSWKTPYDTSKFVEIS
                     IEKVIHTLIEAMVLVFVVMYLFLQNIRYTLIPTIVVPISLLGGFAFISYMGMSINVLT
                     MFAMVLVIGIVVDDAIVVVENVERIMAGESLPPKEATKKAMGQISGAVIGITAVLISV
                     FVPLAMFSGATGNIYKQFALTMASSIAFSAFLALTLTPALCATMLKTIPKGHHEEKKG
                     FFGWFNKKFNSWTHGYEGRVAKVLRKTFRMMVVYIGLAVVGVFLFMRLPTSFLPTEDQ
                     GFVMVSVQLPAGATQERTNATLAQVTQLAKSIPEIENIITVSGFSFSGSGQNMAMGFA
                     ILKDWNERTAPGSDAVAIAGKLTGMMMGTLKDGFGIAVVPPPILELGNGSGLSINLQD
                     RNNTGHTALLAKRNELIQKMRASGLFDPSTVRAGGLEDSPQLKIDINRAAAAAQGISF
                     ADIRTALASALSSSYVSDFPNQGRLQRVMVQADEDARMQPADILNLTVPNKSGVAVPL
                     STIATVSWENGTEQSVRFNGYPSMKLSASPATGVSTGQAMAAVQKMVDELGGGYSFEW
                     GGQSREEAKGGSQTLILYGLAVAAVFLVLAALYESWSIPLAVILVIPLGLIGAAAGVT
                     GRNLFEGLLGSVPSFANDIYFQVGFVTVMGLSAKNAILIIEFAKDLQAQGKSAVEAAL
                     EAARLRFRPIIMTSFAFILGVVPLYIAGGASSASQRAIGTTVFWGMLIGTLLSVFLVP
                     LFYVVVRKFFKETAHEHEMAVKHAAEAGITGSDDSQH"
     gene            complement(5677..6915)
                     /gene="mtrC"
                     /locus_tag="WHR07_001505"
     CDS             complement(5677..6915)
                     /gene="mtrC"
                     /locus_tag="WHR07_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit MtrC"
                     /protein_id="HEZ2130709.1"
                     /translation="MAFYAFKAMRAAALAAAVALVLSSCGKGGDAAQGGQPAGREAPA
                     PVVGVVTVHPQTVALTVELPGRLESLRTADVRAQVGGIIQKRLFQEGSYVRAGQPLYQ
                     IDSSTYEAGLESARAQLATAQATLAKADADLARYKPLVAAEAVSRQEYDAAVTAKRSA
                     EAGVKAAQAAIKSAGINLNRSRITAPISGFIGHSKVSEGTLLNAGDTTVLATIRQTNP
                     MYVNVTQSASEVMKLRRQIAEGKLLAADGVIAVGIKFDDGTVYPEKGRLLFADPAVNE
                     STGQITLRAAVPNDQNILMPGLYVRVLMDQVAVDNAFIVPQQAVTRGAKDTVMIVNAQ
                     GGMEPREVTVAQQQGTNWIVTSGLKDGDKVVVEGISIASITGAKKVTPKEWAPSENQA
                     AAPQSGVQTASEAKTASEAE"
BASE COUNT         1623 a         1947 c         1824 g         1577 t
ORIGIN      
        1 atcaaacatc aaattggact gaccaatcag ggcggattct aatgacacgc cgttcccgcc
       61 gtcaacggca tttacctcgc accgcccccg aaacacaaga aaaaactaca ccaaactaca
      121 atttttgttt atacaaatat ttgttttgac aggatttaaa cgaaagctcc gattcaaatc
      181 tgccgaaccg cccaaaaata tatagtggat taacaaaaat caggacaagg cgacgaagcc
      241 gcagacagta cagatagtac ggtaaggcga ggcaacgccg tactggttta aatttaatcc
      301 attctattga cctgaatatt aaagtttcgc aaagtaatgc aacgttgctt taattggttt
      361 gaccactatt gccgacgatt agaaaaatat tttcggagat gttcaattat ggaaacttgg
      421 gttcaaaact acacggcaat cggcggcagc ctgtatctga ctgccgccgc cgcactctta
      481 cccatcgtct ttttctttgc cgcgctgacc gtcctgaagc tgaaaggcta tcaggcgggg
      541 ctttatacgc tgctgattgc gcttgccgtt gccgtattcg gcttcgggat gccggcgggt
      601 atggcggttt cttccctgcc gccgcagccg cactgaccca acgcccctac gccacgctgg
      661 atttgaccgc gcattacaaa atcggcaaat ccacccgcat cggtttggac tttgaaaacg
      721 tgttcaacaa acgctaccgc cctatgcccg acattcacgt ttacggcacg ccgcgcagcc
      781 tgaccgcaac cgtcaaacat atagtggatt aacaaaaatc aggacaaggc gacgaagccg
      841 cagacagtac aaatagtaca acttggtgct tcagcacctt agagaatcgt tctctttgag
      901 ctaaggcgag ccaacgctgt actggttttt gttaatccac tataaagaaa gaaatgccgt
      961 ctgaaacctt atcgtttcag acggcatttt attgcccgac cggttatttg tcggtttggg
     1021 tatcccgttt caatccgccg ccgagtgcct tgtacaaatc ggcaaggttt tcggcgcggg
     1081 tcagttgtgc cgacaaagcc gcaccttccg ccgaatagct gctgcgttcc gcatcgagca
     1141 agtcgagcgc gccggatacg ccgtgtttgt aacgcagacc gaccaaacgc aacgcttctt
     1201 tagaggcgcg gctttgtttg cttaaagcgt cataggcttt atccaactgc tcgcgcgccg
     1261 ccaatgcgtt tgccacgtct tgaaatgcgg attggacggc ggattcatag gcaacgattt
     1321 gtgcctgttg gcgcagcttg gctacatcaa ggttcgcctt gttcgtaccc caggtaaaaa
     1381 tcggcagggt aatagacggc gcgaacgacc aaacgcccgt gccgcttttg aacaacccac
     1441 ccaattcggc agaacccgta ccgacggttc cggtcaggcg gatggatggg aaaaaggcgg
     1501 cgcgtgccgc accgatattg gcgtttgcct gtttgagcgc gtgttcggca gcacggatat
     1561 cgggacggtc gagcaatact tcggaactca aaccggccgg cagtttttca acaaaaaact
     1621 gcttgtccag cggcaaaccg gcaggcaggt cttcgggtat cggttggtta atcaaggttg
     1681 ccaaggcatt gcgcgcctgt tcgcggctgc gcgcggcatg ggcataatcg gctttggcag
     1741 attcgattag ggcttcctgc tgacgtaggg cgacggcgga aatcacgcct gccttgtaac
     1801 gtaattcgga cagcttgtag gtttcctcgc gcgttttcaa aacacgttgc gccaaagaca
     1861 tcgcttcttc ggcgtaacgt tcgttgaaat aggctttggc aacggtggca atcaggctca
     1921 aatgtgccgc atcgcggttg gcggtgctgg cgaaatagcc ttgcagtgcc gcctcgctgc
     1981 tgctgcgtac acgcccgaac agatcgagtt cgtaagatgc cgcacccagt ccgactttgt
     2041 agctgctgct tacattgccg ccgctcaagc tgccttggcg cgagccgttc gcattggcgg
     2101 caagcgtggg caggaggttg ttgcgctcaa tcatgtattg tttgcggtag atttcgctgt
     2161 tcaatacggc ggtacgcaaa ctggtattgc gctcgagtgc gatgtcgatc agcttttgca
     2221 ggcgcgggtc ggcaaaatag tcgtgccaac ccaaatcgac ggcgcggatg ccgctgtcgg
     2281 cggtatcgtt tttgaacgtt tcggcaactt cgactttggg ctgctcgtat tggggaatca
     2341 tggtgcaggc ggataatgcg aaggctgctg caacagaagt caaggtggtt ttcaatgtag
     2401 tatccataaa aaagtcctga tgccgtctga aaacccgtgg gcgttcagac ggcatggttg
     2461 cttaatgttg gctgtcgtcc gaaccggtga tgcccgcttc ggcagcgtgt tttactgcca
     2521 tttcgtgttc gtgcgcggtt tctttgaaga atttgcgcac caccacatag aaaagcggaa
     2581 caaggaacac cgacaagagc gtgccgatga gcatccccca gaatacggtt gtaccaatgg
     2641 cgcgctggct ggcagaactt gcaccgccgg caatatacag gggaaccacg cccaaaataa
     2701 aggcaaacga ggtcatgata atcggacgga aacgcaggcg ggctgcttcc aaagcggctt
     2761 caaccgcgct tttcccttgc gcttgaaggt ctttggcaaa ttcgataatc aaaatcgcat
     2821 ttttcgcact caaacccatc acggtaacga aaccgacttg aaagtagatg tcgttggcga
     2881 acgagggaac gctgcccaac agtccttcaa acaggttgcg cccggttacg cccgcagccg
     2941 caccgatcaa acccaacgga atcacaagga tgaccgccag cggaatcgac cagctttcat
     3001 aaagcgcggc aagtaccaaa aatacggctg caaccgccaa accgtacaaa atcagggttt
     3061 gcgagccgcc ttttgcctct tcgcgcgact gtccgcccca ttcgaagctg taaccgccgc
     3121 ccaattcgtc aaccattttt tgaaccgccg ccatagcctg cccggtggaa acgccggttg
     3181 caggcgaagc ggacagcttc atcgaaggat aaccgttgaa gcgtacgctc tgttccgtac
     3241 cgttttccca agaaacagta gcaatggtgg aaagcggtac ggcgacgccg gatttgttcg
     3301 gcacggtcag gttcaaaata tcggcaggct gcatacgggc atcctcgtcg gcctgcacca
     3361 tcacgcgttg cagacggcct tggttcggga agtcgctgac ataagacgaa ctcagcgcgc
     3421 ttgccaatgc ggtgcggatg tcggcaaacg aaatgccttg cgccgccgcg gcggcacggt
     3481 tgatgtcgat tttcaactgc ggcgagtctt ccaaaccgcc agcacggacg gtgctggggt
     3541 caaacaaacc gctggcacgc attttctgaa tcaactcgtt gcgcttcgcc agcaatgcgg
     3601 tatggccggt attattgcgg tcttgcaggt tgatgctcag gcccgaacca ttgcccaact
     3661 ccagaatcgg aggcgggacg acggcgatgc caaaaccgtc tttaagcgtc cccatcatca
     3721 tacccgtcag cttgccggca atcgcaacgg catcgctgcc gggcgcggta cgctcgttcc
     3781 aatctttcaa tatggcaaaa cccatcgcca tattctgacc gctgcccgaa aagctgaagc
     3841 cggaaacggt aatgatgttt tctatttcag gaatgctttt cgccagttgg gtaacttgcg
     3901 ccaaagtcgc attggtgcgc tcttgggtcg ctcctgcagg cagttgcacg ctgaccatga
     3961 cgaagccttg gtcttcggtc ggcaggaatg aagtcggcag gcgcataaac aggaacacgc
     4021 ccacaaccgc caagccgata tagacaacca tcatgcggaa agtcttacgc agcactttgg
     4081 caacccggcc ttcgtaaccg tgcgtccaac tgttgaattt cttgttaaac cagccgaaga
     4141 aacctttttt ctcttcgtga tgccctttcg ggattgtctt caacattgtg gcacacaaag
     4201 caggggtaag ggtcagcgca aggaaggcgg agaatgcgat tgatgacgcc atcgtcaggg
     4261 caaactgttt gtaaatattg cccgtcgccc cgctgaacat cgccaacggt acgaacacgg
     4321 aaatcagaac ggcggtaata ccgatgaccg cacccgaaat ctgacccatc gcttttttgg
     4381 tcgcttcttt gggcggcaag ctttcacccg ccataatgcg ctcgacgttt tcaaccacca
     4441 caatcgcgtc atcgaccacg atgccgatga ccaaaaccat cgcaaacatg gtcagtacgt
     4501 taatcgacat gcccatataa gagatgaagg cgaaaccgcc caacagcgaa atcggtacga
     4561 cgatggtcgg aatcagcgta taacggatgt tttgcaggaa gagatacatt acgacaaaca
     4621 ccagcaccat cgcttcgatt aaagtatgaa tcactttttc aatcgaaatt tcgacgaatt
     4681 tggaagtatc gtaaggggtt ttccagctca taccctgagg aaagtatttt tccaacgtcg
     4741 ccatgcgttc tttaaccgcc tttgccgtcg ccatcgcatt gccgctgttg gacagcatca
     4801 ccgccatacc ggtggtattt acaccgttca gacgggttga ggaagaatag tcttccatac
     4861 ccagtccgac ccttgccaca tccttcaggt aaacattaga accgtcggta ttggcgcgga
     4921 ggatgacgtt gccgaattct tctgccgtac ccaactgccc ttgcgccgtt acggtagccg
     4981 taaccgtctg tccgcgaacg gcgggaagcg aaccgataga acccgctgaa atctggacgt
     5041 tctgggcgga cagcgcgctg ccgatatcgg caaacgacaa attgtagttt tgcagtttct
     5101 taggatcaac ccaaatccgc atcgcgcgtt gcgcgccgaa caggcgtacc tgccccacgc
     5161 cttcgatacg ctgcagttcg ggaacgatat tacgctgcgc gtagtcgttc atctcttcgg
     5221 ttgactgcac atccgacgaa agcatcacaa tcatcaggaa attggaacgc gccttggata
     5281 cggttacgcc gtattgctgg acggttgccg gcagcgtgct caatacttcg gaaagcttgt
     5341 tctgcacttc cacctgcgcc agattctcgt cggtatcggg cgtaaaggtc aggctcacgc
     5401 tgccgctgcc gctcgaatcg gcggaagtgg acatataatc caaaccttcc acgccgttca
     5461 tattccgctc gatcacggaa agcacgctgt cttccattac ctgcgcggac gcacccggat
     5521 aagtggcgtg caaagtaatg gtcggggcgg cgacagacgg atattgcgaa acaggcaggc
     5581 ttttgatgcc gaaaataccc gccgcaataa tgaaaatcga aataacccac gcaaaaatag
     5641 ggcggtcgat aaaaaattta gccatcgatg ccttccttat tccgcttcag aagcagtttt
     5701 ggcttcagat gccgtctgaa cgccggattg aggcgcggcg gcttggtttt cagacggcgc
     5761 ccattctttg ggcgttacct ttttcgcacc cgttatactg gcgatactga tgccttccac
     5821 aaccaccttg tccccgtcct tcagacccga cgtaacaatc caattcgtac cctgctgttg
     5881 cgcaaccgtt acctcgcggg gttccatacc gccttgggca ttcacaatca tcacggtatc
     5941 tttcgcaccg cgcgttactg cctgctgtgg aacgatgaat gcattatcca ccgccacttg
     6001 gtccatcagc acgcgcacat acaggccggg catcaggata ttctgatcgt tcggtacggc
     6061 ggcgcgcagg gtaatctgac cggtcgattc gttgacggcc ggatcggcaa acagcaggcg
     6121 gcctttttca gggtaaactg tgccgtcgtc aaatttgatg ccgaccgcaa tcacaccatc
     6181 cgccgccagc agtttgcctt cggctatctg acggcgcaat ttcatcactt cggatgcaga
     6241 ctgggtaacg ttcacataca tcggattggt ttggcggatg gttgccagca cggtcgtatc
     6301 gcccgcattc aacagcgtac cttcggaaac tttggagtga ccgataaagc cggaaatcgg
     6361 cgcggtaatg cgcgaacggt tcagattaat gccggcagat ttgattgccg cctgtgctgc
     6421 tttgacacct gcctcggcag aacgtttcgc cgttaccgca gcatcgtatt cctgccggct
     6481 gacggcttcg gcggcaacca aaggcttgta tcgcgccaaa tccgcatccg ctttggcaag
     6541 cgttgcctga gccgttgcca gttgcgcgcg cgcgctttcc agacctgctt cataagtgga
     6601 actgtcgatc tgatacagcg gctgtccggc acggacataa ctgccttctt ggaacaggcg
     6661 tttttggatg atgccgccga cttgggcgcg gacatcggcg gtacgcagcg attccaaacg
     6721 ccccggcaac tcgacggtca atgcgacggt ttgcggatgg acggttacga caccgacgac
     6781 gggcgcaggg gcttcccgac cagcaggctg cccgccctgc gccgcgtctc cgcctttacc
     6841 gcaagacgac agtaccaatg caacggcggc agccaacgcg gccgcacgca tcgccttaaa
     6901 agcataaaaa gccattattt atcctatctg tctggtttga tgtaaagggt tttgccaatc
     6961 aacaggcatt c
//
LOCUS       DAWGKF010000109         6877 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.109, whole genome shotgun sequence.
ACCESSION   DAWGKF010000109 DAWGKF010000000
VERSION     DAWGKF010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6877)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6877)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6877
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.109"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            98..814
                     /locus_tag="WHR07_001506"
     CDS             98..814
                     /locus_tag="WHR07_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEZ2130710.1"
                     /translation="MNFENDDIIHAPTTSSLILEERHDSELFRVYALILDGITDQVLL
                     PGKKLTESELCRQMVCSRNTVRGALSLLAHDKIVDLQPNRGAFVHVPDLKEMQDVFNA
                     RIEMETMILNILADLPDLETRLKPLYAMIRREEEASGRGDRVGWNRLSNAFHVELARL
                     VGNDVLFDIMNTLCARSSLIVAVAGVHREEKHAINTHTHSEHREILDLLLAGRRNRVV
                     KILRRHLGNCMERLEKTLED"
     gene            963..1865
                     /locus_tag="WHR07_001507"
     CDS             963..1865
                     /locus_tag="WHR07_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine exporter LysO family protein"
                     /protein_id="HEZ2130711.1"
                     /translation="MDSLMTLLSVLVPMFAGFFIRVPKPYLPALDKVLSVLVYAVLLL
                     IGVSLSRVEDLGSRLDDMALTVLWLFVCTVGANLLALAVLGKLFPWRIKGKGKGVSVG
                     VSGSVGQLGCVLLGFAFGKLMRDIWMPSESAGMYCLMLLVFLIGVQLKSSGVSLRQVL
                     VNRRGIRLSVWFMLSSLSGGLLFAASTDGVSWTKGLAMASGFGWYSLSGLVMTEAYGA
                     VWGSIMLLNDLARELFALAFIPLLMKRFPDAAVGVGGATSMDFTLPVIQGAGGLEVVP
                     VAVSFGVVVNIAAPFLMVVFSTLG"
     gene            1908..2681
                     /locus_tag="WHR07_001508"
     CDS             1908..2681
                     /locus_tag="WHR07_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEZ2130712.1"
                     /translation="MKPKIQRHGEILSLVRRHQFMSVDELAAALDVTPQTIRRDIREL
                     EEAGSLKRHHGGASSGGNLPEGLPADRQTRCQNEKNAIARLIAEHIPDGSSLFVSIGT
                     TMEAVVSELVRRRGSLRVITNNIHAASIASARTDYTVIITSGVVRPLDGGITGVATVD
                     FINQFKVDYAVMSTHGVESDGSLLDDDYKEVSVMQAMIANARVRFLGVDHSKFRSNAL
                     VRLGDITAFDKVFTDRLPDTAMQKMLKEAGVECLIADAV"
     gene            2793..4481
                     /locus_tag="WHR07_001509"
     CDS             2793..4481
                     /locus_tag="WHR07_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase/YqeY domain fusion
                     protein"
                     /protein_id="HEZ2130713.1"
                     /translation="MLNKDQFADNHFIRTFIEEDLKSGKHETIQTRFPPEPNGYLHIG
                     HAKSICLNFGLAYIYDGLCNLRFDDTNPEKENDEYVNAIKEDVEWLGFHWAGEPRFAS
                     NYFDQLYDYAVGLVKDGKAYVDDLTPEEMREYRGTLTEAGKNSPYRDRSIEENLDLFT
                     RMKNGEFPDGSKTLRLKIDMASGNINMRDPVIYRIRRAHHHNTGDKWCIYPMYDYTHC
                     ISDAIEGITHSLCTLEFEAHRPLYDWVLDNIPAPHATRPRQYEFSRLELLYTITSKRK
                     LNQLVVEKHVSGWDDPRMPTISGMRRRGYTPEGLRLFAKRAGISKSENIVDMSVLEGA
                     IREELENSAPRLMAVLNPLKVTLTNFETGRTQSRRAAFHPNHEEMGEREVPISQTIYI
                     EADDFAENPPKGFKRLIPGGEVRLRHGYVIKCDEVVKDEAGNVVELKCSIDHDTLGKN
                     PEGRKVKGVIHWVSAEHAAEIKVRLYDRLFTVERPDAVRGEDGEYLPFTDFLNPESVK
                     EITAYAEPAAKDLPAESRWQFERIGYFVTDRKDHGKDTSVFNRTVTLKDSWQPK"
     gene            4574..5530
                     /gene="gshB"
                     /locus_tag="WHR07_001510"
     CDS             4574..5530
                     /gene="gshB"
                     /locus_tag="WHR07_001510"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HEZ2130714.1"
                     /translation="MKVLFIADPMASFKTYKDTTYAMMREMAKRGWRLFHTLSGELSV
                     KNGLVVADASAFEFLGAQDDHDKNWFAAADKVQTALKAFDAVIMRTDPPFDMQYLYAT
                     QLLTLAEQQGAKVFNSGQAMRDFNEKLAILNFSRFTAPTLVTTRSADVRAFLKEHGDI
                     IIKPLDGMGGMGIFRLTEKDPNIGSILETLMRLDSRTIMAQRYIPEIVHGDKRILIIG
                     GEVVPYALARIPQNGETRGNLAAGGRGVAQELDGRDREIAETLAPELKRRGILLAGLD
                     VIGSNLTEVNVTSPTGFQEIMKQKGFDVAAMFADAVAAWSVR"
     gene            5842..6225
                     /locus_tag="WHR07_001511"
     CDS             5842..6225
                     /locus_tag="WHR07_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HEZ2130715.1"
                     /translation="MEPSSYAAEKKGKGGIRRVINAFGYSIDGIAAAYRYEAAFRQVL
                     WLNVLLVCAAFFWVSETAVRLPLIIASFVSVIVELFNTAVEAAVDHTSTEKHELAKRA
                     KDAGSAAQLFAMLMLAAVWLSALFG"
     gene            6340..6813
                     /locus_tag="WHR07_001512"
     CDS             6340..6813
                     /locus_tag="WHR07_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HEZ2130716.1"
                     /translation="MKKLLAAVMMAGLAGAVSAAGVHVEDGWARTTVEGMKIGGAFMK
                     IHNDEAKQDFLLGGSSPVADRVEVHTHINDNGVMRMREVKGGVPLEAKSVTELKPGSY
                     HVMFMGLKKQLKEGDKIPVTLKFKNAKAQTVQLEVKIAPMSAMDHGHHHGEAHQH"
BASE COUNT         1626 a         1831 c         1897 g         1523 t
ORIGIN      
        1 aatttgtgca atgctttaat tcctctgaca cgatttgaaa cacagccgcc ttaaaacatc
       61 ttaaaaaatt tgaaagcgta aaaatacgga aaacatcatg aactttgaaa acgacgacat
      121 tatccatgcg ccgaccacgt cttccctgat tctcgaagag cggcacgatt cggagctgtt
      181 ccgtgtttac gccctgattt tggacggcat taccgatcag gtgctgctgc ccggcaaaaa
      241 gctgaccgaa tccgaacttt gccgtcagat ggtgtgttcg cgcaacaccg tccgcggcgc
      301 gctgtcgctt ttggcgcacg acaagattgt cgatttgcaa cccaacaggg gcgcgttcgt
      361 ccacgttccc gatttgaaag aaatgcagga tgtgttcaat gcgcgcatcg aaatggagac
      421 gatgattttg aatatcctcg cagatttgcc ggatttggaa acgcgcctca agccgcttta
      481 tgcgatgata aggcgcgaag aagaggcttc cggcaggggc gaccgcgtcg gctggaaccg
      541 cctgtccaat gccttccacg tcgaactggc gcgcctggtg ggcaacgatg tgctgttcga
      601 cattatgaac acgctgtgcg cgcggtcttc cctgattgtc gccgtggcgg gcgtgcatcg
      661 cgaggaaaaa cacgccatca atacgcatac gcattccgaa caccgcgaaa tcctcgacct
      721 gctgctggcg ggcaggcgca accgcgtggt caaaatcctg cgccgccatt tgggcaactg
      781 tatggaacgc ttggaaaaga ctttggaaga ttgaatgccg gagcggataa gccgcctgaa
      841 ccttcaggcg gttttttaat ggcgaacctg atgccgtctg aaatatggat gcgggtatct
      901 gcaattttca gacggcaatt tttaaaccgc atatatcatg cggcaataaa ggaggtcagg
      961 agatggacag cctgatgaca ttgctttcgg tattggtacc gatgttcgcc ggatttttta
     1021 tccgtgtgcc caagccttac ctgcccgctt tggacaaggt gctgtcggtt ttggtgtatg
     1081 ccgtgctgct gctgatcggc gtatcgttgt cgcgcgtgga ggatttgggt tcgcggttgg
     1141 acgatatggc gttgacggtt ctgtggctgt ttgtttgtac ggtcggggcg aacctgcttg
     1201 ctttggcagt gttgggaaag ttattcccgt ggcggataaa ggggaaaggg aagggcgttt
     1261 cggtcggcgt gtcgggcagt gtggggcagc tcggatgcgt gctgctcgga tttgcattcg
     1321 gcaaactgat gcgcgatatt tggatgccgt ctgaaagcgc gggcatgtat tgtctgatgc
     1381 tgctggtgtt cctcatcggc gtacagctca aaagcagcgg cgtatcgttg cggcaggttt
     1441 tggtcaaccg caggggtatt cggttgtcgg tctggtttat gctttcatct ctttcgggcg
     1501 ggctgctgtt tgccgcatcg acagacggtg tgtcgtggac gaaaggtttg gcgatggctt
     1561 ccggcttcgg ttggtattcc ctctcgggtt tggtcatgac cgaggcttac ggcgcggtat
     1621 ggggcagcat catgctgctg aacgatttgg cacgagagct gtttgcactg gcatttatcc
     1681 cgctgctgat gaagcgtttt ccggatgcgg cggtgggggt tggcggtgcg accagtatgg
     1741 attttacatt gcccgtgatt cagggtgcgg gcggtttgga agtcgtgccg gtagcggtca
     1801 gcttcggcgt ggtggtcaat attgccgccc cgtttctgat ggtggtgttt tccacgctgg
     1861 gctgaacacg gtaaaatcgg catcccgatg caaggaggca gaaaacgatg aaaccgaaaa
     1921 tccaaaggca cggagagatt ttaagccttg tccgccggca tcagtttatg tcggtggacg
     1981 agcttgccgc cgcattggac gttaccccgc agacgatacg ccgcgacatc cgcgagttgg
     2041 aggaggccgg cagcctgaaa cgccatcacg gcggcgcatc ttcgggcgga aacttgccgg
     2101 agggcctgcc cgccgaccgc caaacccggt gtcaaaacga aaaaaacgcc attgcccggc
     2161 tgattgcgga acacatcccc gacggttcgt cgctgtttgt cagtatcggc acgacgatgg
     2221 aggccgtggt gtcggagctg gtcaggcggc gcggcagcct gagggtgatt accaacaata
     2281 tccacgccgc ctcgattgct tcggcgcgga cggattatac ggtcattatc acttctggag
     2341 tcgtccgtcc tttggacggc ggtattaccg gcgtggcaac cgtcgatttt atcaaccagt
     2401 tcaaagtcga ttatgccgtg atgagtacgc acggcgtgga aagcgacggt tcgcttttgg
     2461 acgacgacta caaagaagtc agcgtgatgc aggcgatgat tgccaatgcg cgcgtccgct
     2521 tcctcggcgt ggaccacagt aaattccgca gcaacgcgct ggtcaggctc ggcgacatta
     2581 cggcgtttga caaagtattt accgaccggc tgcccgatac cgcgatgcag aagatgctga
     2641 aagaggcggg ggtggaatgc ctgattgccg atgccgtctg aacgctatgt caaagcgcgc
     2701 aagtcgggta caataaacac atcatcaaac cgcttcagac ggcataagga accgccccaa
     2761 tgccgtctga agccatctgt tcaaagaaaa ctatgctcaa taaagaccaa tttgcggaca
     2821 accattttat ccgcaccttc atcgaagaag acctcaaaag cggcaaacac gaaaccatcc
     2881 aaacccgttt tccgccggag cccaacggct acctgcacat cggacacgcc aaatccatct
     2941 gcctgaactt cggtttggcg tatatttacg acggcttgtg caacctgcgt tttgacgata
     3001 ccaaccccga aaaagaaaac gacgaatacg tcaacgccat caaagaagac gttgagtggc
     3061 tcggtttcca ttgggcgggc gagccgcgtt tcgcttccaa ctatttcgac cagctttatg
     3121 actacgccgt cggtttggtt aaagacggca aagcgtatgt cgatgatttg acgccagaag
     3181 aaatgcgcga ataccgcggt acgctgaccg aagcaggcaa aaacagccct tatcgcgacc
     3241 gcagtatcga agaaaacctc gacctgttca cgcgcatgaa aaacggtgag ttccccgacg
     3301 gcagcaaaac cctgcgcctg aaaatcgaca tggcatccgg caacatcaat atgcgcgatc
     3361 cggtcatcta ccgcatccgc cgcgcccatc accacaacac cggcgacaaa tggtgcatct
     3421 atccgatgta cgactacacg cattgtattt ccgatgccat cgaaggcatc acgcattcct
     3481 tgtgtacgct cgaatttgaa gcccatcgtc cgctgtatga ctgggtgttg gacaacatcc
     3541 ccgcgccgca cgccacacgt ccgcgccaat acgagttttc acgcttggag cttttgtaca
     3601 ccattacctc caaacggaaa ttgaatcagt tggttgtgga aaaacacgtt tccggctggg
     3661 acgatccgcg tatgccgacc atttccggta tgcgccgacg cggctacacg cccgaagggc
     3721 tgcgcctgtt tgccaaacgc gccggtattt ccaaatctga aaacatcgtc gatatgagcg
     3781 tgttggaagg cgcgattcgc gaagagttgg aaaattccgc cccacgcctg atggcggtgt
     3841 tgaacccgct caaagtgacc ctgaccaact ttgaaaccgg cagaacccaa agccgccgtg
     3901 ccgcgttcca tccgaaccac gaggaaatgg gcgagcgcga agtacctatt tcacaaacca
     3961 tctatattga agccgacgac tttgccgaaa atccgcccaa aggcttcaaa cgcctgattc
     4021 ccggcggcga agtacgcttg cgccacggct atgtcatcaa gtgcgatgaa gtcgtcaaag
     4081 acgaagcagg caatgtggtt gaactcaaat gcagcatcga ccacgacacc ttgggcaaaa
     4141 atccagaagg ccgtaaagtt aaaggcgtga ttcattgggt ttccgccgaa cacgccgccg
     4201 aaatcaaagt ccgtctgtac gaccgcctct ttaccgtcga gcgtcccgat gccgtgcgcg
     4261 gcgaagacgg cgaatacctg ccgttcaccg atttcctcaa tccggaatcc gtcaaggaaa
     4321 tcaccgccta cgccgaacct gccgccaaag atttgccggc agaaagccgt tggcagttcg
     4381 agcgtatcgg ctacttcgta accgaccgta aagaccacgg caaagacacg tcggtgttta
     4441 accgcacggt cacgctgaaa gattcttggc agcctaagta aaaccccatc cttgccgtct
     4501 gaatattgtt cggacggcat ttcccctttg cccgcgaaat gcggcacatt cggcacaccg
     4561 gaaaggaaat atgatgaaag tcctctttat cgccgacccg atggcaagtt tcaaaaccta
     4621 caaagacacc acctacgcca tgatgcgcga gatggcaaaa cgcggttggc ggctgtttca
     4681 taccttgagc ggggaattgt cggttaaaaa cggtctggtg gttgctgatg cgtctgcttt
     4741 tgagtttctc ggcgcacaag acgaccacga caaaaactgg tttgccgccg ccgacaaagt
     4801 tcagacggca ttgaaagcat ttgatgccgt gattatgcgt accgatccgc cgttcgatat
     4861 gcaatacctc tacgccacac agcttctgac gctggcggag cagcagggcg cgaaggtctt
     4921 taacagcgga caggcgatgc gtgatttcaa tgaaaaactg gcgattttga acttcagccg
     4981 ctttaccgcg cccacgctgg taacgacccg ttccgccgat gtccgcgcat ttttgaaaga
     5041 acacggcgac atcatcatta aaccgctgga cggtatgggc ggtatgggta ttttccgcct
     5101 gaccgaaaaa gatcccaaca tcggcagcat cctcgaaacc ctgatgcggc ttgattcccg
     5161 caccattatg gcgcaacgct acattcccga aatcgtacac ggtgacaaac gcatcctgat
     5221 tatcggcggc gaagtcgtcc cctatgcttt ggcgcgtatc ccgcaaaacg gcgaaacacg
     5281 cggcaacctt gcggcaggcg gacgcggcgt ggcgcaggaa ttggacggac gcgaccgcga
     5341 aattgccgaa acgctcgccc ccgaactcaa acggcgcggc atcctgctgg ccggtttgga
     5401 cgttatcggc agcaacctga ccgaagtcaa cgtaaccagc ccgaccggat tccaagaaat
     5461 tatgaaacaa aaaggtttcg acgtggcggc aatgtttgcc gatgccgttg ccgcgtggtc
     5521 ggtacgttaa accgatgccg tttgaaaggc ttttgcttca caaccgtttg gtttgttcgg
     5581 gcaggcaggg ttttctctca gccggcaggg atgcggttaa tgccgtacgg acaccccgcc
     5641 gccccgtttt cagacggtat atatagtgga ttaacaaaaa tcaggacaag gcggcgaagc
     5701 tgcagacagt acaaatagta cggaaccgat tcactcggtg cttcagcacc ttagagaatc
     5761 gttctctttg agctaaggcg gggcaacgcc gtacaggttt ttgttaatcc actatattga
     5821 gaacattttg aaaggatacc gatggaacct tcctcctacg cggcagaaaa aaaaggcaaa
     5881 ggcggcatca ggcgcgtcat taacgcattc ggctattcga tagacggcat cgccgccgcc
     5941 taccgttacg aagcggcatt ccgtcaggtt ttgtggctga acgtactgct ggtgtgcgcg
     6001 gcattttttt gggtttccga aaccgccgtc cgcctgccgt tgattatcgc gtcttttgtg
     6061 tcggtcattg tcgaactgtt caacaccgcc gtcgaagctg ccgtcgatca tacttcgacc
     6121 gaaaaacacg agctggccaa acgcgccaaa gacgcaggtt ctgccgcaca attgttcgcg
     6181 atgctgatgt tggcggcggt ttggctgtct gccctgttcg ggtaaaacgc ttgcagcagg
     6241 atttgtaatc ctttaggatt agtatgtggt atttattatt cacttaatcc actataagat
     6301 taagcacatt ccccgtctga tattataagg agcagaaaga tgaaaaaatt attggcggcc
     6361 gtgatgatgg caggtttggc aggcgcggtt tccgccgccg gagtccacgt tgaggacggc
     6421 tgggcgcgca ccaccgtcga aggtatgaaa ataggcggcg cgttcatgaa aatccacaac
     6481 gacgaagcca aacaagactt tttgctcggc ggaagcagcc ccgttgccga ccgcgtcgaa
     6541 gtgcataccc acatcaacga caacggcgtg atgcggatgc gcgaagtcaa aggcggcgtg
     6601 cctttggagg cgaaatccgt taccgaactc aagcccggca gctatcacgt gatgtttatg
     6661 ggtttgaaaa aacaattaaa agagggcgac aagattcccg ttaccctgaa atttaaaaac
     6721 gccaaagcgc aaaccgtcca actggaagtc aaaatcgcgc cgatgtcggc aatggaccac
     6781 ggtcatcacc acggcgaagc gcatcagcac taatctgctg aaaatatttg aaatgccgtc
     6841 tgaaaaagcc cgggctttca gacggcattt ttatgac
//
LOCUS       DAWGKF010000110         6862 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.110, whole genome shotgun sequence.
ACCESSION   DAWGKF010000110 DAWGKF010000000
VERSION     DAWGKF010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6862)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6862)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6862
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.110"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..227)
                     /locus_tag="WHR07_001513"
     CDS             complement(<1..227)
                     /locus_tag="WHR07_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ2130717.1"
                     /translation="MLPSKYEDNTLQIKEKSTERTAPFFVLEVTARSAADILGIHPNS
                     AALFYRKIRTVINHHLALAADEVFEGPVEPD"
     gene            267..836
                     /locus_tag="WHR07_001514"
                     /pseudo
     CDS             267..836
                     /locus_tag="WHR07_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691695.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase chain length factor"
     gene            1068..1568
                     /locus_tag="WHR07_001515"
     CDS             1068..1568
                     /locus_tag="WHR07_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003798052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130718.1"
                     /translation="MVFVNPLYYGREAGWFVWLAAAMCGLWLLRALTAKLPQQRYAAL
                     FITLFFAAVLVFGRHDSMYWYPVLVNLMMLAVFGGSLFAGQTVIEKLARLQQPDLPEK
                     AVRYTRRVTQVWCVFFIANGTLAALLARLGRYDWWAVYTGVIAYVLMGMPFAGEWLYR
                     KLVLKV"
     gene            1575..2090
                     /locus_tag="WHR07_001516"
     CDS             1575..2090
                     /locus_tag="WHR07_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2199 domain-containing protein"
                     /protein_id="HEZ2130719.1"
                     /translation="MYTCTSCGEKHEDMPAIGFTAPYPYNQLSEEERIAYQAECGGDF
                     CIIRYPDQTDRFIRAVLLIPIIGHEETLEYGVWVSVSEKSFNDYQSHFHDNPENVVYF
                     GMICNRLPPYETDTFGLHCNVVTQPDGQRPLLQLHQGSEHPLVRDFYHGIEYAEAQAR
                     IGAVSESDCSG"
     gene            2110..3588
                     /gene="ubiD"
                     /locus_tag="WHR07_001517"
     CDS             2110..3588
                     /gene="ubiD"
                     /locus_tag="WHR07_001517"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HEZ2130720.1"
                     /translation="MKYKDLRDFIAMLEQQGKLKRIAHPVSPHLEMTEIADRVLRAEG
                     PALLFENPVKPDGTRYGYPVLANLFGTPERVAMGMGADSVSKLREIGQTLAYLKEPEP
                     PKGIKDAFSKLPLLKDIWSMAPNVVKNAPCQEIVWEGENVDLYKLPIQHCWPEDVAPL
                     VTWGLTVTRGPHKKRQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEFRKLNPDTPYP
                     VAVVLGCDPATILGAVTPVPDTLSEYQFAGLLRGSRTELVKCIGNDLQVPARAEIVLE
                     GVIHPNETALEGPYGDHTGYYNEQDHFPVFTVERITMRENPIYHSTYTGKPPDEPAVL
                     GVALNEVFVPLLQKQFPEITDFYLPPEGCSYRMAVVSMKKQYAGHAKRVMMGCWSFLR
                     QFMYTKFIIVVDDDVNVRDWKEVIWAVTTRMDPVRDTVLVENTPIDYLDFASPVSGLG
                     GKMGLDATNKWPGETDREWGRVIKKDPAVTAKIDGIWEELGL"
     gene            complement(3653..5767)
                     /locus_tag="WHR07_001518"
     CDS             complement(3653..5767)
                     /locus_tag="WHR07_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HEZ2130721.1"
                     /translation="MDLLSVFHKYRLKYAVAVLTILLLAAVGLHASVYRTFTPENIRS
                     RLQQSIAHTHRKISFDADIQRRLLPRPTVILKNLTITEPGGDQTAVSVQETKIGLSWK
                     NLWSDQIQIEKWVVSSAELALTRDGKGVWNIQDLIDSQKRQASVNRIIVENSTVRLNF
                     LQEQLILKEINLNLQSPDSSGQPFESSGILVWGKLSVPWKSRGLFLSDGIGTPKISPF
                     HFEASTSLDGHGITISTTGSPSVRFNAGGADAAGLGLRADTSFRNLHLTAQIPTLALR
                     NNSIKIETVNGAFTAGGEYAQWDGSFKLDKANLHSGIANIGNAEISGSFKTPRHQTNF
                     SLNSPLVWTENKGLDAPRLYVSTLQDTVNRLPQPRFISRLDGSLSVPNLQNWNAELNG
                     TFDRQTVAAKFRYTHEDAPHLEAAVALQKLNLTPYLDDVRQQNGKIFPDTLAKLSGDI
                     EAHLKIGKVQLPGLQLDDMETYLHADKGHIALSRFKSGLYGGHTEGGISIANTRPATY
                     RLQQNASNIQIQPLLQDLFGFHSFSGNGDAVIDLTAGGETRKELIRSLQGSLSLNISN
                     GAWHGIDMDNILKNGISGKTADNAAPSTPFHRFTLNSEISDGISRHIDTELFSDSLYV
                     TSNGYTNLDTQELSEDVLIRNAVHPKNKPIPLKITGTVDKPSITVDYGRLTGGINSRK
                     EKQKILEDTLLEQWQWLKPKEP"
     gene            5858..6751
                     /locus_tag="WHR07_001519"
     CDS             5858..6751
                     /locus_tag="WHR07_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HEZ2130722.1"
                     /translation="MIIVMSRRAAEADIAGVVAFIRSRGLREHISHGDERTVIGAIGD
                     DRVLSVREVQTLPEVEKAVRILDTWKTVSRENRAEDSRVAAKGVAFGGGETVRIAAEP
                     SVWRNADAVFLDPFFTSANLYDTSSADERRGRCRRLAEQTASAHGAGKPVLVRVRNVR
                     HVEAALNAGADILYLGGGLMSDLAVLNEAGSLNIPLVLCKDKHHSAEDWLNAAEYVVS
                     RGNRHLILGESGVLSHTKDHPYRLDVESIVKVRQISHLPVIANITGLWNRDMPQEILY
                     GLAKAAGACGIVGTCFEKSGG"
BASE COUNT         1475 a         1677 c         2069 g         1641 t
ORIGIN      
        1 tcgtccggct cgacagggcc ctcaaaaacc tcatcggcag ccaaggccaa atgatggttg
       61 ataaccgtgc ggattttacg gtagaacagt gctgccgaat tgggatggat acccaaaata
      121 tcggcggcag aacgggcggt aacttccagc acaaaaaacg gagcagttct ttctgtactt
      181 ttttctttaa tttgcagtgt gttatcttca tatttcgagg gtaacatatc tgctaatcta
      241 gtacagcccc taaaatttaa tccactatag tttatgcctc gcacgacggg gaaatggcgc
      301 gcagtttcga tttgtggttg gaactgttga aatcgcaaac cgtgtcgccg acttcgttcg
      361 gtttgtcggt gcacaatgca acggcggggt aatggtcgat attgaggcgg gatatgagcg
      421 agcagacggc attggccgtg tgtgccgacg gtgtggaaac ggcattggcg gaagcggcat
      481 cactgttgga agagggatgc gggtcggttt tggttttggc ggcggacgat ccgctgccgg
      541 aaggatatgc cgtatcggca acgcgcgcgc cgtttgctta tgctttggcg atggttctga
      601 ccaaagggac gcgttacagc ctgactttat ctgcttcgga cgatatgccg tctgaagccg
      661 gtatgctgcc cgaggcatat tggagcggtt tggaatgggt gcgctttctg ctgaacggca
      721 gtcgggaatg ccgccgggta tatcgcaatc gtgaatggct gtggcagccc gcaagctgca
      781 ggctgaagat ttccgcaatg tccgcaccgt caacgacgtg gtacaggcgg tattgaagat
      841 tcaggcgggc taatcgggta tttctaatta tttttcagac ggcatgtttt tatcggatgc
      901 cgtctgaaaa catttgtgcg gattcaaaat gaaacccggt tttttcggac atatttttct
      961 gaccgtatta agcattgcct atcccgcttt gtggtatagt ggattaacaa aaatcaggac
     1021 aaggcgacga agccgcagac agtacggcaa ggcgaggcaa cgctgtactg gtttttgtta
     1081 atccactata ttacggcagg gaggcgggct ggtttgtctg gctggcggcg gcgatgtgcg
     1141 ggttgtggct gctgcgcgcc ctgactgcca aactgcccca acagcgttat gcggctttgt
     1201 ttattacact gttttttgcc gcagtattgg tgttcgggcg gcatgattcg atgtattggt
     1261 atcccgtcct cgtcaatctg atgatgttgg cggtgttcgg cggcagcctg tttgccgggc
     1321 agacggtgat tgaaaaactt gcgcggctgc aacagcccga cctgcctgaa aaagctgtgc
     1381 gctatacccg ccgggtaacg caggtttggt gcgtattctt tattgccaac gggacgcttg
     1441 ccgctttgtt ggcacggttg gggcgatatg attggtgggc ggtttatacc ggcgtgattg
     1501 cctatgtatt gatggggatg ccgtttgccg gcgaatggct ttaccgcaaa ctcgttttga
     1561 aagtctgaaa ccttatgtac acttgcactt cctgcggcga aaaacatgaa gatatgcccg
     1621 caatcggctt taccgccccc tatccctata atcaactcag tgaagaagaa cgcattgctt
     1681 accaagctga atgcggcggc gatttctgca tcatccgcta tcccgaccaa accgaccgtt
     1741 ttatccgcgc ggtgctgctt attccgatta tcgggcatga ggaaacgctg gaatacggcg
     1801 tgtgggtgtc cgtcagcgaa aagagtttta acgactatca aagccacttt cacgacaatc
     1861 cggaaaatgt cgtttatttc gggatgatct gcaaccggct gcccccttat gaaaccgaca
     1921 ccttcggttt gcattgcaat gtcgttaccc aacccgatgg tcaacgtcct ttgttgcaac
     1981 tccatcaagg cagcgaacat ccgctggtac gcgactttta tcacggcata gaatatgccg
     2041 aagcgcaggc aaggataggg gcggtatccg aatcggattg ctcaggataa aaggacaaaa
     2101 aggatgaata tgaaatacaa agacctgcgc gacttcatcg ccatgctcga gcagcagggc
     2161 aaactcaaac gcatcgcgca ccccgtttcc ccgcatttgg aaatgaccga aatcgccgac
     2221 cgcgtgctgc gcgccgaagg gccggcgttg ctgtttgaaa acccggttaa gcccgacggt
     2281 acgcgctacg gttatcctgt gttggcaaac ctgttcggca cgcccgaacg tgtggcgatg
     2341 ggcatgggcg cggacagcgt gtccaagctg cgtgaaatcg ggcagacgct ggcgtatttg
     2401 aaagaacccg aaccgcccaa aggcatcaaa gatgcgtttt ccaaactgcc gctactgaaa
     2461 gacatttgga gcatggcgcc gaacgtggtg aaaaacgcgc cgtgtcagga aatcgtgtgg
     2521 gaaggcgaaa acgttgattt gtataaactt ccgattcagc attgctggcc ggaagacgtt
     2581 gcgccgctgg taacatgggg cttgaccgta acgcgcgggc cgcacaaaaa acgccaaaat
     2641 ctcggcattt accgccaaca actcatcggc aaaaacaagc tgattatgcg ctggctgtcg
     2701 catcgcggcg gcgcgttgga ttatcaggag ttccgcaaac tcaatcccga tacgccgtat
     2761 cccgtcgccg tcgtgctcgg ttgcgaccct gccactattc tcggagcggt aacgcctgtt
     2821 cccgatactt tgagcgaata ccagtttgcc ggactgctgc gcggttcgcg gacggagctg
     2881 gtgaaatgta tcggcaacga tttgcaagtg cctgcccgtg ctgaaattgt attggaaggc
     2941 gtgattcatc cgaacgaaac cgcgttggaa ggcccatacg gcgaccacac cggctattac
     3001 aacgagcagg atcatttccc tgtatttacg gtcgagcgca tcaccatgcg cgaaaacccg
     3061 atttaccatt cgacctacac aggcaaacct cccgatgaac ccgctgtttt gggcgtggca
     3121 ttgaacgaag tgttcgtacc gctcttgcaa aagcagttcc ccgaaatcac cgatttttac
     3181 ctgccgcccg aaggctgctc ctaccgcatg gcggtggtga gcatgaaaaa acagtacgcc
     3241 ggacacgcca agcgcgtgat gatgggctgc tggtcgttcc tgcgccagtt tatgtacacc
     3301 aaattcatca tcgtggtgga tgacgatgtg aacgtacgcg actggaaaga agtcatctgg
     3361 gcggtcacca cgcgcatgga ccccgtgcgc gacactgttt tggtagaaaa cacgcccatc
     3421 gattatctcg acttcgccag ccccgtcagc ggactcggcg gcaaaatggg tttggatgcg
     3481 accaacaaat ggccgggcga aaccgaccgc gaatggggac gcgtcatcaa aaaagaccct
     3541 gcggttacgg ctaagattga tgggatttgg gaggaattgg ggttgtaggt tttacggtca
     3601 tgccgtctga agcgcggggg tgtttcagac ggcatttttg tacgcaggat gtttacggtt
     3661 ctttaggttt gagccactgc cattgttcca gcagggtgtc ttcgaggatt ttctgtttct
     3721 ctttgcgcga attgatgccg ccggtcagcc tgccgtaatc gacggtaatg gacggcttgt
     3781 ccaccgtacc ggtgattttc aggggaatcg gtttgttttt cggatggacg gcgttgcgga
     3841 taaggacatc ttcagacaat tcctgcgtat ccagattggt atagccgttg ctggtaacat
     3901 agaggctgtc ggagaagagt tcggtatcga tgtggcggct gatgccgtct gaaatttcgc
     3961 tgttgagcgt gaatcggtgg aagggtgtgc tgggtgcggc attgtcggca gttttgcccg
     4021 aaatgccgtt tttcaggata ttgtccatgt cgataccgtg ccatgcgcca ttggaaatat
     4081 tcagcgacag gctgccttga agcgagcgga taagctcttt tcgggtttcg ccgcccgcgg
     4141 tcaggtcgat gaccgcgtcg ccgttgccgc tgaagctgtg gaagccgaac aggtcttgca
     4201 gcagcggttg gatttggatg ttgcttgcat tctgttgcag gcggtaagtg gcgggacggg
     4261 tgttggcgat gctgatgccg ccttcggtat ggccgccgta aagccctgac ttgaaacggc
     4321 tgagcgcgat atggcctttg tcggcgtgga ggtaggtttc catatcgtcc agttgcaggc
     4381 cgggaagttg gacttttccg attttcaggt gcgcctcgat gtcgccggac agcttggcga
     4441 gggtgtcggg aaatattttg ccgttttgtt gccgcacgtc gtcaagatag ggggtcaggt
     4501 tcaatttttg cagtgcgacg gcggcttcca gatgcggtgc gtcttcatgt gtgtatctga
     4561 atttcgcggc aacggtttgg cggtcgaatg tgccgtttaa ttcggcattc caattttgca
     4621 gattcggtac ggacagcgaa ccgtcgagcc ggctgatgaa acggggttgc ggcaggcggt
     4681 tgacggtatc ctgaagggtc gatacataca ggcgcggcgc gtccagccct ttgttttccg
     4741 tccatacgag cggcgaattg agggagaagt tggtctggtg gcgcggtgtt ttgaagctgc
     4801 cggagatttc ggcgttgccg atgttggcga tgccggagtg caggttggct ttgtcgagtt
     4861 tgaacgaacc gtcccattgg gcatattcgc cgccggcggt aaatgcgccg ttgacggttt
     4921 caattttaat gctgttgttc ctgagtgcca gcgtagggat ttgggcggtc aggtggaggt
     4981 tgcggaagga agtgtctgca cgcaggccga ggccggcggc atccgctccg ccggcgttga
     5041 agcggacaga agggctgccg gtggtggaaa tggtaatgcc gtgtccgtcc agcgaagtgg
     5101 aagcttcaaa atggaacggt gagattttgg gcgtgccgat gccgtctgaa aggaacagcc
     5161 ccctgctttt ccacgggacg gacagctttc cccaaaccag tatgcccgaa ctttcaaacg
     5221 gctgccccga cgaatcgggg gattgcaggt tgaggttgat ttccttcagg ataagctgtt
     5281 cctgcaggaa attgaggcgg acggtgctgt tttcgacgat aatgcggttg actgaggctt
     5341 ggcgtttttg gctgtcgatc aggtcttgga tgttccaaac acctttcccg tcgcgcgtca
     5401 gggcaagttc cgcactcgaa accacccatt tttcaatctg tatctgatcc gaccacaggt
     5461 ttttccagct caatccgatt ttggtttctt ggacggaaac ggcagtctgg tcgccgccgg
     5521 gttcggtaat ggtcaggttt ttcaggatga cggtcggccg gggcaggagc ctgcgctgaa
     5581 tgtccgcatc aaacgagatt ttccggtgtg tgtgtgcaat gctttgttgg aggcggctgc
     5641 ggatgttttc aggcgtgaag gtgcgatata cggaagcgtg cagcccgact gccgccaaaa
     5701 gcagtatcgt cagcacggcc accgcatatt tcagacggta tttgtggaaa accgataata
     5761 aatccatagc ccgaacaatc tgtaaaacac gccacagtat aacacggctt gcaaaaatcc
     5821 tattttgggc aggccgtttc ttgtgtcagg aggaaatatg attattgtca tgagcaggcg
     5881 tgccgccgaa gcggacattg ccggcgttgt cgcctttatc cgcagcagag gtctgcgaga
     5941 acacatttct cacggcgacg agcgtaccgt catcggcgca atcggcgacg atagggtttt
     6001 gagcgtcagg gaggtgcaga cgctgccgga ggtcgagaaa gccgtccgca ttttggatac
     6061 atggaaaacc gtcagtcggg aaaatcgggc ggaagacagc cgcgttgccg ccaaaggcgt
     6121 ggctttcggc ggcggggaaa ccgtccgtat cgccgcagaa ccgtcagtat ggcgcaatgc
     6181 ggatgcagtg tttctggatc cgtttttcac ttcggcaaac ttatacgaca cttcaagtgc
     6241 ggatgaaagg cggggacggt gcagacggtt ggcggaacag accgcatcgg cgcatggcgc
     6301 agggaaaccc gtattggtgc gcgtccgcaa cgtccgccat gtcgaagcgg ctttgaatgc
     6361 gggggcggac atcctgtatt tgggcggcgg gctgatgtcc gatcttgccg tattgaatga
     6421 agccggaagc ctgaacattc ccttggtgct gtgtaaagac aagcaccatt ctgccgaaga
     6481 ttggttgaat gccgcagaat atgtcgtctc gcgcggcaac cgccacctga ttctgggcga
     6541 gtcgggcgtg ttgagccata ccaaagacca tccctaccgt ttggatgtcg aatccatcgt
     6601 gaaagtccgc caaatcagcc atctgcccgt gattgcgaat attacgggat tatggaaccg
     6661 cgatatgccg caggaaatcc tgtacggctt ggcaaaggcg gcaggcgcgt gcggaatcgt
     6721 cggaacctgt tttgaaaagt cgggcggata gcaggcatac cggcagattc aaaggcggag
     6781 cagacattcg gacaacatgc cgtctgccgc ccgaatagcg gtgccgtctg aagcgcacaa
     6841 gacggtttca gacggcatat aa
//
LOCUS       DAWGKF010000111         6823 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.111, whole genome shotgun sequence.
ACCESSION   DAWGKF010000111 DAWGKF010000000
VERSION     DAWGKF010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6823)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6823)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6823
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.111"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            120..1025
                     /gene="glyQ"
                     /locus_tag="WHR07_001520"
     CDS             120..1025
                     /gene="glyQ"
                     /locus_tag="WHR07_001520"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEZ2130723.1"
                     /translation="MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRAL
                     GPEPWFAAYVQPSRRPKDGRYGDNPNRLQHYYQFQVALKPAPANIQDLYLDSLRELGI
                     DPKVHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITY
                     GIERLAMYLQGVENVYDLVWAKTLDGNTVTYGDVYHQNEVEQSTYNFEYSDADWLLRQ
                     FNDYEAQAKRLLAEENAALALPAYELVLKAGHTFNLLDARGAISVTERATYIGRIRAL
                     SRAVAQKYVESREKLGFPLMKANAA"
     gene            1102..1512
                     /locus_tag="WHR07_001521"
     CDS             1102..1512
                     /locus_tag="WHR07_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggL family protein"
                     /protein_id="HEZ2130724.1"
                     /translation="MPVYFRTPSRKRLHKMNRRQHKKLHLGEFQTLIFGVQGSLHQAE
                     DDAEAFDRFMDELIAYLAANGLEMAGGGDCGDFSCLFQKSGSRGLGETEKKAIISWLA
                     GREDVATLHATPLVDGFYGDDGWENYSETYKQAD"
     gene            1533..3596
                     /locus_tag="WHR07_001522"
     CDS             1533..3596
                     /locus_tag="WHR07_001522"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEZ2130725.1"
                     /translation="MMTQTLLIELLTEELPPKALNNLGNHFAAAVAEGLEKAQLVDGA
                     AEFTAYASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK
                     IEDLTIVHDGKQDVYAYEYVQTGKPLGGLLEDIINQAVKKLPIPKVMRWGSSTFTFVR
                     PVHGLIVLHGGDIVNVSVLGLQSSNQTLGHRFLSDGEIIIENADSYAEQMREQGKVVA
                     SFAERKAAIQTALEGQAHRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQE
                     CLILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDPSHIIRGNERVLRARLSDAEFF
                     YKQDQKATLESRLPKLANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAAR
                     LAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDNLPNGKVA
                     TAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFD
                     SFPKGLLNEKTPSETADFMQARLAVLLQNDYPQDIVAAVLAKQPRRLDDLTAKLQAVA
                     AFKQLPEAAALAAANKRVQNLLKKADAALGEVNESLLQQDEEKALFAAAQGLQPKIAA
                     AVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI
                     ALLGE"
     gene            3660..4700
                     /locus_tag="WHR07_001523"
     CDS             3660..4700
                     /locus_tag="WHR07_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEZ2130726.1"
                     /translation="MQPLVSVLICAYNVEKYFAQSLAAVVNQTWRNLDILIVDDGSTD
                     GTLAIAKDFQKRDSRIRILAQPRNSGLIPSLNIGLDELAKSGMGEYIARTDADDIAAP
                     DWIEKIVGEMEKDRSIIAMGAWLEVLSEEKDGNRLARHHEHGKIWKKPTRHEDIAAFF
                     PFGNPIHNNTMIMRRSVIDGGLRYNTERDWAEDYQFWYDVSKLGRLAYYPEALVKYRL
                     HANQVSSKHSVRQHEIAQGIQKTARNDFLQSMGFKTRFDSLEYRQTKAAAYELLEKDL
                     PEEDFERARRFLYQCFKRADTPPARAWLDFAADGRMRRLFTLRQYFSILHRLIKNRRQ
                     ARSDSAGKEQEI"
     gene            4700..5539
                     /locus_tag="WHR07_001524"
     CDS             4700..5539
                     /locus_tag="WHR07_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HEZ2130727.1"
                     /translation="MQNHVISLSSAAERRAHIAETFGSRGIPFQFFDALMPSERLEQA
                     MAELVPGLSAHPYLSSVEKACFMSHAVLWKQALDEGLPYIAVFEDDVLLGEGAEKFLD
                     EDAWLQERFDKDSAFIVRLETMFMHVLTSPSGVADYCGRAFPLLESEHWGTAGYIISK
                     KAMRFFLDRFAALPSEGLHPVDWMMFGNPDDREGMPVCQLNPALCAQELHYAKFHDQN
                     SALGSLIEHDRLLNRKQQRRDSPANTFKHRLIRALTKISREREKRRQRREQLIGKIIV
                     PFQ"
     gene            5551..5646
                     /locus_tag="WHR07_001525"
     CDS             5551..5646
                     /locus_tag="WHR07_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lacto-N-neotetraose biosynthesis glycosyl
                     transferase"
                     /protein_id="HEZ2130728.1"
                     /translation="MDIVFAADGRMRRLFTLRQYFGILRRLLKNR"
     gene            5688..6494
                     /locus_tag="WHR07_001526"
     CDS             5688..6494
                     /locus_tag="WHR07_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HEZ2130729.1"
                     /translation="MQNHVISLASAAERRAHIADTFGRHGIPFQFFDALMPSERLEQA
                     MAELVPGLSAHPYLSGVEKACFMSHAVLWKQALDEGLPYIAVFEDDVLLGEGAEKFLA
                     EDTWLQERFNPDSAFIVRLETMFMHVLTSPSGVADYCGRAFPLLESEHFGMAGYIISR
                     KAMRFFLDRFAVLPSERLKAVDWMLFSSFLDKGGMTVCQLTPALCIQSETLPSQLKNG
                     RQESYRNRRSPKVLLKRALGKIGREIERARERKRQKKLEKHLGRHVVPFE"
BASE COUNT         1713 a         1887 c         1792 g         1431 t
ORIGIN      
        1 aatttaatcc actatatcat gtatgccgtg ttttcaaatc agtctgtctt tgagataaac
       61 ctatccaaac agcaatggaa acagtaaaat aaacccttta ttttatcgaa tcataagcca
      121 tgcttacctt ccaacaaatc atcttcaaac tgcaaacctt ctgggcagac aaaggctgca
      181 ccgtcatcca acccttcgac atggaagtcg gtgccggcac atcccatccc gccacctgcc
      241 tgcgcgcgct cgggcccgag ccttggtttg ccgcctacgt ccaacccagc cgccgcccca
      301 aagacggccg ctacggcgac aaccccaacc gcctgcaaca ctattaccaa ttccaagtcg
      361 ccctcaagcc cgctcccgct aatatccaag acctctatct cgactctctg cgcgaattgg
      421 gcatcgatcc caaagtccac gacatccgct ttgtcgaaga cgactgggaa aaccccaccc
      481 tcggcgcgtg gggtttgggc tgggaagtct ggctcaacgg catggaagta acccagttta
      541 cctatttcca acaagtcggc ggcatcgact gcacgcccgt actcggcgaa atcacctacg
      601 gcatcgaacg cttggcgatg tacttgcaag gtgtagaaaa cgtctacgac ctcgtttggg
      661 caaaaacgct cgacggcaac accgtcacct acggcgacgt gtaccaccaa aacgaagtcg
      721 agcaatccac ctacaacttc gaatacagcg atgccgactg gctgctgcgc cagttcaacg
      781 actacgaagc gcaagccaaa cgcctgcttg ccgaagaaaa cgccgccctc gccctgcctg
      841 cctacgagct tgtcctcaaa gcggggcata cgttcaacct tttagacgca cgcggcgcga
      901 tttccgtaac tgagcgggca acttatattg gacgtattcg tgcattgagc cgcgccgtgg
      961 cgcaaaaata tgttgaaagc cgcgaaaaac tgggcttccc tttaatgaag gcaaacgccg
     1021 cctaaggggg cgacgatttt ttacgttcgg gcggcacgat aaggcagccg tccggaagcc
     1081 attatatttt ttaggaaaat catgcctgtc tatttccgca ccccaagcag gaaacgcctg
     1141 cacaaaatga accgccgcca gcataaaaag ctgcatttgg gcgagtttca aacattgatt
     1201 ttcggcgttc aaggcagttt gcaccaagct gaggacgatg ccgaagcgtt cgaccgcttt
     1261 atggacgagc tgattgcgta tcttgcggca aacggcttgg aaatggcggg cgggggcgat
     1321 tgcggcgatt tttcgtgcct gtttcaaaaa tccggctccc gaggcttggg cgaaaccgag
     1381 aaaaaagcca ttatctcttg gctggcaggt cgcgaagatg tcgccacttt gcacgccacc
     1441 ccgctggttg acggttttta cggggatgac ggctgggaaa attacagcga aacctataaa
     1501 caggcagatt aaccaaattc aaagaaagcc gaatgatgac ccaaaccctt ttaatcgaac
     1561 tccttaccga agaactcccg cccaaagctc tgaataatct gggcaaccat tttgccgccg
     1621 ccgttgccga aggcttggaa aaagcgcaac tggttgacgg tgcagccgaa tttacggctt
     1681 atgcctcgcc gcgccgtttg gcggttcaag tcaaaaacgt caaagccgtt caggccgacc
     1741 aaaaaatcgt gaaaaaaggc cctgccgtgg cgaatgccat gaaagacggt gcgccgacca
     1801 aggctttgga aggtttcgca cgcggtgcgg gcgcgaaaat cgaagatttg accatcgtcc
     1861 acgacggcaa gcaagacgtg tacgcctacg aatacgtcca aaccggcaaa ccgttgggcg
     1921 gacttttgga agacattatc aatcaagccg ttaagaaact gccgattcca aaagtgatgc
     1981 gttggggcag cagtacattt accttcgtgc gccccgtcca cgggctgatt gtgctgcacg
     2041 gcggcgacat cgtaaacgtc agcgttttgg gtctgcaaag cagcaatcaa accttgggac
     2101 accgcttcct ctccgacggc gaaatcatca ttgaaaacgc cgacagctac gccgaacaaa
     2161 tgcgcgaaca aggcaaagtc gtcgcttcgt ttgccgagcg caaagccgcg attcagacgg
     2221 cattggaagg gcaggcacac cgtctgaacg cgaccgttgc cgccgatgaa gcattgttgg
     2281 acgaagttac cgcgttggtc gaatggcctg tggtattgga agccggtttt gaagaacact
     2341 tcctcgccgt gccgcaagaa tgcttgattc tgaccatgca gcaaaaccaa aaatacttcc
     2401 cgctgctcga ccaaaacggc aagctgatga accgcttcct gctggtctcc aacctgcaaa
     2461 ccgaagatcc gtcgcacatc atccgaggca acgaacgcgt tttgcgcgcg cgcctgtctg
     2521 atgccgaatt cttctacaag caagaccaaa aggcgacttt ggaaagccgc ctgcccaagc
     2581 tggcaaacgt ggtttatcac aacaaaatcg gctcgcaagc cgaacgcatc gaacgtttgc
     2641 aaagcattgc cgcccatatc gccaaagcat tgggcgcgga tgccgcggca gccgaacgcg
     2701 ccgcgcgttt ggcgaaagcc gacttggtga ccgaaatggt cggcgagttc cccgaactgc
     2761 aaggtacgat gggcaaatac tatgcccgtt tggacggcga aaccgaagaa atcgccgaag
     2821 ccatcgagca acactatcaa ccgcgttttg ccggtgataa cttgccgaac ggcaaagtcg
     2881 ccactgccgt ggcactggcg gacaagctgg aaaccttggt cggcatttgg ggcatcggtc
     2941 tgattccgac cggcgacaaa gacccctacg ccctgcgccg cgccgccttg ggtattttgc
     3001 ggatgctgat gcagtatggt ttggacgtga acgaactgat tcagacggca ttcgacagct
     3061 tccccaaagg tttgctcaac gaaaaaacgc cgtctgaaac cgccgacttt atgcaggcgc
     3121 gccttgccgt gttgctgcaa aacgattatc cgcaagacat cgttgccgcc gtactcgcca
     3181 aacagccgcg ccgtttggac gatttgaccg ccaaactgca ggctgtcgcc gcgttcaaac
     3241 aactgcccga agccgccgcg ctcgccgccg ccaacaaacg cgtgcaaaac ctgctgaaaa
     3301 aagccgatgc cgcgttgggc gaagtcaatg aaagcctgtt gcaacaggac gaagaaaaag
     3361 ccctctttgc cgctgcgcaa ggcttgcagc cgaaaatcgc cgccgccgtc gccgaaggca
     3421 atttccaaac cgccttgtcc gaactggctt ccgtcaagcc gcaagtcgat gccttctttg
     3481 acggcgtgat ggtgatggcg gaagatgccg ccgtaaaaca aaaccgcctg aacctgctga
     3541 accgcttggc agagcagatg aacgcggtgg ccgacatcgc gcttttgggc gagtaaccgt
     3601 tgtatagtcc aaatgccgtc tgaagccttc agacggcatc aaattatcgg gagaataaat
     3661 tgcagccttt agtcagcgta ttgatttgcg cctacaacgt agaaaaatat ttcgcccaat
     3721 cattagccgc cgtcgtgaat cagacttggc gaaacttgga tattttgatt gtcgatgacg
     3781 gctcgacaga cggtacgctt gccattgcca aggattttca aaagcgggac agccgtatcc
     3841 gcatcctcgc gcagccgcgc aattcgggcc tgattccttc tttaaacatc gggctggacg
     3901 aattggcaaa gtcaggaatg ggggaatata ttgcacgcac cgatgccgac gatattgccg
     3961 cccccgactg gattgaaaaa atcgtgggcg agatggaaaa agaccgcagc atcattgcca
     4021 tgggtgcgtg gctggaagtt ttgtcggaag aaaaggacgg caaccggctg gcgcggcacc
     4081 acgaacacgg caaaatttgg aaaaagccga cccggcacga agacatcgcc gcctttttcc
     4141 ctttcggcaa ccctatacac aacaacacga tgattatgcg gcgcagcgtc attgacggcg
     4201 gtttgcgtta caacaccgag cgggattggg cggaagatta ccaattttgg tacgatgtca
     4261 gcaaattggg caggctggct tattatcccg aagccttggt caaataccgc cttcatgcca
     4321 atcaggtttc atccaaacac agcgtccgcc aacacgaaat cgcgcagggc atccaaaaaa
     4381 ccgccagaaa cgatttcttg cagtctatgg gttttaaaac ccggttcgac agccttgaat
     4441 accgccaaac aaaagcagcg gcgtatgaac tgctggagaa ggatttgccg gaagaagatt
     4501 ttgaacgcgc ccgccggttt ttgtaccaat gcttcaaacg ggcggacacg ccgcccgctc
     4561 gtgcgtggct ggattttgcg gcagacggca ggatgcggcg gctgtttacc ttgaggcaat
     4621 acttcagcat tttgcaccgg ctgattaaaa accgccggca ggcgcggtcg gattcggcag
     4681 ggaaagaaca ggagatttaa tgcaaaacca cgttatcagc ctaagctccg ccgcagaacg
     4741 cagggcgcac attgccgaaa ccttcggcag tcgcggcatc ccgtttcagt ttttcgacgc
     4801 actgatgccg tctgaaaggc tggaacaggc gatggcggaa ctcgtccccg gcttgtcggc
     4861 gcacccctat ttgagcagtg tggaaaaagc ctgctttatg agccacgccg tattgtggaa
     4921 acaggcattg gacgaaggtc tgccgtatat cgccgtattt gaggacgacg ttttactcgg
     4981 cgaaggcgcg gagaaattcc ttgacgaaga cgcttggctg caagagcgtt ttgacaagga
     5041 ttccgccttt atcgtccgct tggaaacgat gtttatgcac gtcctgacct cgccctccgg
     5101 cgtggcggac tactgcgggc gtgccttccc gcttttggaa agcgaacact gggggacggc
     5161 gggctatatc atttccaaaa aagcgatgcg gtttttcctg gacaggtttg cagccctgcc
     5221 gtctgaaggg ctgcaccccg tcgattggat gatgttcggc aaccctgacg acagggaagg
     5281 aatgccggtt tgccagctca atcccgcctt gtgcgcccaa gagctgcatt atgccaagtt
     5341 tcacgaccaa aacagcgcat tgggcagcct gatcgaacac gaccgcctcc tgaaccgcaa
     5401 acagcaaagg cgcgattccc ccgccaacac attcaaacac cgcctgatcc gcgccttgac
     5461 caaaatcagc agggaaaggg aaaaacgccg gcaaaggcgc gaacagttaa tcggcaaaat
     5521 tattgtgcct ttccaataaa aggagaaaag atggacatcg tatttgcggc agacggcagg
     5581 atgcggcggc tgtttacctt gaggcaatac ttcggcattt tgcgccgatt gctgaaaaac
     5641 cgttgaaaaa cgccgcttta tccaacagac aaaaaacagg ataaattatg caaaaccacg
     5701 ttatcagctt ggcttccgcc gcagaacgca gggcgcacat tgccgatacc ttcggcaggc
     5761 acggcatccc gtttcagttt ttcgacgcac tgatgccgtc tgaaaggctg gaacaggcaa
     5821 tggcggaact cgtacccggc ttgtcggcgc acccctattt gagcggagtg gaaaaagcct
     5881 gctttatgag ccacgccgta ttgtggaaac aggcattgga cgaaggctta ccgtatatcg
     5941 ccgtatttga ggacgacgtt ttactcggcg aaggcgcgga gaaattcctt gccgaagata
     6001 cttggctgca agaacgcttt aaccctgatt ccgcctttat cgtccgcttg gaaacgatgt
     6061 ttatgcacgt cctgacctcg ccctccggcg tggcggacta ctgcgggcgt gccttcccgc
     6121 tgttggaaag cgaacatttt ggtatggcgg gttatattat ttcccgaaag gcgatgcgtt
     6181 tctttttgga caggtttgcc gttttgccgt ccgaacgcct gaaggcggtg gattggatgc
     6241 tgttcagcag ttttctcgac aaagggggga tgacggtttg ccaactgacc cccgccttgt
     6301 gcatccaaag cgaaaccctg cccagccaac tgaaaaacgg caggcaggaa tcgtaccgca
     6361 accgccgctc cccgaaggtt ttgttgaaac gcgctttggg aaaaatcggc agggaaatcg
     6421 aaagggcgag ggaacggaaa cgtcagaaaa aattggaaaa acacctcggg cggcacgtcg
     6481 tcccgtttga ataggttttg gcctttcctt atttggcggg tgtgcgctgt ccctaaattt
     6541 atgtcgggga atccggtttg ttcggtttca cttgttttcg ggtaagccct aattcgtgat
     6601 tcccgcgaaa acagaaagcc aaaaacagaa acctgaaatc tcgtcattcc cgcgcaggcg
     6661 ggaatctagg tctttaaact tcggtttttt ccgataaatt cttgccgcat taaaattcta
     6721 gattcccgtc tgcgcgggaa tgacggcggg gggatttctg tttttccgat aaattcctaa
     6781 aacttaaaat tccgttattc ccgcgaaaac agaaaaccaa aaa
//
LOCUS       DAWGKF010000112         6682 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.112, whole genome shotgun sequence.
ACCESSION   DAWGKF010000112 DAWGKF010000000
VERSION     DAWGKF010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6682)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6682)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6682
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.112"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..410)
                     /locus_tag="WHR07_001527"
     CDS             complement(<1..410)
                     /locus_tag="WHR07_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130730.1"
                     /translation="MKADIQTELTQALLSHEKVWANEEKTILAKNILLDLVEKTDPAI
                     IGLLLGNDELKRHFFVEVNGVLVFKLQDFRFFLDKHSVNNSYTKYANRIGLTDGNRFL
                     KDSSDIVLDFPFKDCVLNGGQSSEEGEEIYFKHS"
     gene            complement(701..1633)
                     /gene="truB"
                     /locus_tag="WHR07_001528"
     CDS             complement(701..1633)
                     /gene="truB"
                     /locus_tag="WHR07_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEZ2130731.1"
                     /translation="MNTGKPQKRAVNGVLLLDKPEGLSSNTALQKARRLFHAEKAGHT
                     GVLDPLATGLLPVCFGEATKFAQYLLDADKAYTATLKLGEASSTGDAEGEIIATARAD
                     ISLAEFQTACQALTGNIRQVPPMFSALKHEGKPLYEYARKGIVIERKPRDITVYAIDI
                     AEFDAPKAVISVRCSKGTYIRTLSEDIAKHIGTFAHLTALRRTETAGFTIAQSHTLEA
                     LANLNETERDSLLLPCDVLVAHFPQTVLNDYAVHMLQCGQRPRFEEDLPSDTPVRVYT
                     ENGRFVGLAEYQKEICRLKALRLMNTAVKNTGCV"
     gene            complement(1666..2037)
                     /gene="rbfA"
                     /locus_tag="WHR07_001529"
     CDS             complement(1666..2037)
                     /gene="rbfA"
                     /locus_tag="WHR07_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEZ2130732.1"
                     /translation="MRKPQRGYARQDRVKEQIMRELAELVRTGLKDPRAGFITVNEVE
                     VTRDYSHATVFYTILNQDAREITEEVLEHARGHLRSELAKRIKLFKTPELHFKYDESL
                     ERGLNLSALIDQVAAEKPVED"
     gene            2228..3472
                     /gene="clpX"
                     /locus_tag="WHR07_001530"
     CDS             2228..3472
                     /gene="clpX"
                     /locus_tag="WHR07_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HEZ2130733.1"
                     /translation="MSNENRTCSFCGKSKSHVKHLIEGENAFICDECVSNCIEILHED
                     GNDGTPSESAGGEPEESGKLPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRHP
                     KAGANVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
                     IITKLLGKCDFDVEKAQRGIVYIDEIDKISRKGDNPSITRDVSGEGVQQALLKLIEGT
                     VASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK
                     DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVK
                     QYQALFGMENVELEFEEGALRSIARQAMERKTGVRGLRSIVERCLLDTMYRLPDLKGL
                     KKVVVGKAVIEEGRELELVFEP"
     gene            complement(3575..4771)
                     /locus_tag="WHR07_001531"
     CDS             complement(3575..4771)
                     /locus_tag="WHR07_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEZ2130734.1"
                     /translation="MQNYLTPNFAFAPMIPERASGSRVWDTKGREYIDFSGGIAVNAL
                     GHCHPALVDALNAQMHKLWHISNIYTTRPAQELAQKLVANSFADKVFFCNSGAEANEA
                     ALKLARKYARDRFGGGKSEIVACINSFHGRTLFTVSVGGQPKYSKDYAPLPQGITHVP
                     FNDIAALEAAVGEQTCAVIIEPIQGESGILPATAEYLQTARRLCDRHNALLILDEVQT
                     GMGHTGRLFAYEHYGIVPDILSSAKALGCGFPIGAMLATEKIAAAFQPGTHGSTFGGN
                     PMACAVGSRAFDIINTPETLNHVREQGQKLQTALLDLGRKTGLFSQVRGMGLLLGCVL
                     DEAYRGRASEITAAALKHGVMILVAGADVLRFAPSLLLNDEDMAEGLRRLEHALTEFA
                     ATSDNP"
     gene            5175..5675
                     /locus_tag="WHR07_001532"
     CDS             5175..5675
                     /locus_tag="WHR07_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130735.1"
                     /translation="MNAMPQTAAQNETLHTCSIIVDDAQDFSPMLLDAGRDDTLISES
                     MIPQIRTVAALIAAERHDFSRSSPAEFTDAADFFAARILVLGVRRFHLDVSLLQILKT
                     ANSRARRFAEKHRLFFTPAQAELSLNKHKNRRLLTVETEHEVENKGNPVANSLAFVRK
                     LHPLPL"
     gene            5760..6314
                     /locus_tag="WHR07_001533"
     CDS             5760..6314
                     /locus_tag="WHR07_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130736.1"
                     /translation="MKKIIASALIATFALAACQDDTQARLEQQQKQIEALQQQLAQQA
                     DDTVYQLTPEAVKDTIPAEAQANGNNGQPVTGKDGQQYIYDQSTGSWLLQSLVGAAAG
                     AFIGNALANKFTRAGNQDSPVARRARAAYHQSAHPNARTSRDLNTRSLRAKQQAAQAQ
                     RYRPTTRPPANYRRPAMRGFGRRR"
BASE COUNT         1616 a         1745 c         1754 g         1567 t
ORIGIN      
        1 ttactgtgtt taaaataaat ctcttcgcct tcttcgctgc tttgcccgcc attcaatacg
       61 caatctttaa acggaaaatc caacacaata tccgaactgt ctttcaaaaa gcggttgccg
      121 tccgtcaaac caatgcggtt ggcgtatttt gtgtaggaat tattgacgct gtgtttgtcc
      181 aagaaaaaac gaaaatcctg caatttaaac accaaaacac cattcacttc cacaaaaaaa
      241 tggcgtttta actcatcatt ccccaataac aaaccgataa tggccgggtc ggttttttcc
      301 accaaatcca acagaatgtt tttggctaaa atggtttttt cttcgttcgc ccatactttt
      361 tcgtgtgata gcagggcttg ggttaattcg gtttgaatgt ctgccttcat cgttataaat
      421 cctcatcagt cattttaatg tgccattctt gtgtaacggc aaatggtttt gcaaataaat
      481 actaataaaa tcaatcattt gttatctttg ctgtttccgg gggcgttcgc aaagttgcaa
      541 taagcggggt gggtgtccga gtgtgtcgtg attttgcgga aatatagtgg attaacaaaa
      601 atcaggacaa ggcgacgaag ccgcggacag tacaaatagt acggcaaggc gaggcaacgc
      661 tgtactggtt taaatttaat ccactatatc aacacattat tcaaacacag cccgtatttt
      721 taaccgccgt gttcatcagg cgcaaggctt tcagacggca tatttctttt tgatattccg
      781 ccagtccgac aaagcggccg ttttccgtgt aaacgcgtac cggcgtatcg gaaggcaggt
      841 cttcctcgaa acgcggccgt tgcccgcatt ggagcatatg gacggcataa tcgtttaaaa
      901 cggtttgggg aaaatgggca accaatacgt cgcagggcag cagcaagctg tcgcgttctg
      961 tttcgttcaa atttgccaag gcttcgagcg tgtggctttg ggcgatggta aagccggcgg
     1021 tttcggtgcg gcgcagggcg gtcaggtggg cgaacgtgcc gatgtgtttg gcgatgtctt
     1081 cgctgagggt gcggatatag gtgcctttgc tgcaacgcac gcttatcacg gctttgggtg
     1141 cgtcaaattc ggcaatatcg atggcgtaaa cggtaatatc gcgcggcttg cgttcgatga
     1201 cgatgccttt gcgggcgtat tcgtacagcg gtttgccttc gtgcttgagc gcggaaaaca
     1261 ttggcggcac ttggcggatg ttgcctgtca gtgcttggca ggccgtctga aattcggcta
     1321 aggaaatatc ggcgcgggcg gtggcaatga tttcgccttc ggcatcaccc gtgctgctgg
     1381 cttcgccgag tttcagcgtg gcggtgtagg ctttgtcggc atccagcagg tattgggcga
     1441 acttggtcgc ttcaccgaag cagacgggca aaagtccggt tgccaaaggg tcgagcacgc
     1501 cggtatgtcc ggctttttcg gcatgaaaca aacgccgcgc tttttgcagc gcggtgttgc
     1561 tggaaaggcc ttcgggtttg tccaagagca aaacaccgtt gacggcacgt ttttggggtt
     1621 tgcctgtatt catggttcga tgttcggacg gcatgggcat atccgtcagt cttcaaccgg
     1681 tttttccgcc gctacttggt cgataagggc ggacaggttc aaaccgcgtt ccaaagattc
     1741 gtcgtatttg aaatgcagtt cgggcgtttt gaacagcttg atgcgtttgg ccaattcgct
     1801 gcggaggtgt ccgcgcgcgt gttccagcac ttcttccgta atttcgcgcg cgtcttggtt
     1861 taaaatggtg tagaacacgg tggcgtggct gtaatcgcgg gtaacttcga cttcgttgac
     1921 ggtaatgaag ccggcgcgcg ggtctttcag tccggtacgg acgagttcgg caagctcgcg
     1981 catgatttgt tctttgacac ggtcttggcg ggcgtagccg cgttggggtt ttctcatgaa
     2041 tatcctcaga tttcagattt ggtttcagac ggcatttttg ccgccggggc ggttgcgaaa
     2101 gggcgtatta tagcctaatc ggcgggattt taaggtaata cattgataag aacggatata
     2161 gttattatac ttggcaaccc gaacggcacg tgccgttttc tgtaacgcat acattgtaaa
     2221 gaaagccatg tccaacgaaa accgtacctg ttccttttgc ggaaaatcca aatcacacgt
     2281 caaacattta attgagggcg aaaacgcctt tatctgtgac gaatgcgtct caaactgtat
     2341 tgaaatattg catgaagacg gaaatgacgg cacaccttcg gaaagtgccg gaggggagcc
     2401 ggaagaatcc ggcaagctgc ccacgcccgc cgaaatcgtc gccaacctca acgaccacgt
     2461 tatcggtcag gaacaagcca agaaagcctt ggcggtgtcg gtgtacaacc attacaaacg
     2521 cctgcgccac ccgaaagccg gagctaatgt cgaattgtcg aaatccaaca tcctgcttat
     2581 cggcccgacc ggatcgggta aaaccctgct ggcgcaatct ttggcgcgta aactggacgt
     2641 accgttcgtg atggcggatg caaccacgct gactgaagca ggttatgtcg gcgaagatgt
     2701 cgagcaaatc atcaccaaac tgttgggcaa atgtgatttc gatgttgaaa aagcccagcg
     2761 cggcatcgtc tatatcgacg aaatcgataa aatttcacgc aaaggcgaca atccgtccat
     2821 cacgcgcgac gtgtccggcg aaggtgtgca acaagccttg ctgaaactga ttgaaggtac
     2881 ggtggcaagt gttccgcccc aaggcggccg caagcatccg aatcaggaat ttatcaacgt
     2941 cgataccacc aacatcctgt ttatctgcgg cggtgcgttt gcaggcttgg aaaaagtcat
     3001 ccgccagcgc accgagaaag gcggtatcgg tttcggtgcg tccgttcaca gcaaggacga
     3061 aaatgccgac attaccaagc tgttcggcat cgtcgaaccg gaagatttaa tcaaattcgg
     3121 tctgattccg gaattaatcg gacgtttgcc cgtgattgca acgttagaag aactggatga
     3181 ggacgcgctg attaatattt tgaccgagcc gaaaaatgct ttggtcaagc agtatcaagc
     3241 cttgttcggt atggaaaatg tcgaactgga gtttgaagaa ggcgcattgc gttccatcgc
     3301 gcgtcaggca atggagcgca aaaccggcgt gcgcggcctg cgttccatcg tcgaacgctg
     3361 cctgttggat acgatgtacc gcctgcccga tttgaaaggc ttgaaaaaag tggtggtcgg
     3421 taaggcagtc atcgaagagg gcagggaact ggaattggtg ttcgagccct gatggcaaac
     3481 aaaaccgctt cggaacgtcg aaccacgttt ccgaagcggt tttttgtttt tgatgccgtc
     3541 tgaagccttc ccgccttcag acggcatttg agttttacgg attgtctgat gtcgcggcaa
     3601 attccgtcag cgcgtgttcc aaacgtcgca aaccttccgc catatcctca tcgttcaaca
     3661 gtagcgaagg cgcgaaacgc aatacgtccg cacccgcaac caaaatcatc acgccgtgtt
     3721 tcaaggcggc ggcggtgatt tcggatgcgc gtccgcgata ggcttcgtcc aacacgcagc
     3781 cgagtagcag ccccatcccg cgaacttgtg agaacaagcc cgttttcctg cccaaatcca
     3841 gcaatgccgt ctgaagtttc tgcccctgtt cacggacatg gtttaaagtt tcgggcgtat
     3901 tgatgatgtc gaatgcgcgg ctgccgaccg cacacgccat cgggttgccg ccgaaagtcg
     3961 agccgtgcgt gcccggttgg aaggcggcgg caatcttttc tgtcgccagc atcgcgccga
     4021 tcggaaagcc gcagcccaag gcttttgccg aactcaaaat atcgggaaca atgccgtaat
     4081 gttcataggc aaacagcctg cccgtatgcc ccatcccggt ttgaacttcg tccaaaatca
     4141 acaacgcatt gtgccggtcg cacagacggc gcgcggtttg caaatattcc gcagtggcgg
     4201 gcaggatgcc gctttcgccc tgtatcggct cgatgatgac cgcgcaggtc tgttcgccga
     4261 cggcagcttc cagcgcggca atatcgttga acggaacgtg cgtaatgcct tgcggcaggg
     4321 gtgcataatc cttgctgtat ttcggctgac cgccgacgga cacggtaaac agcgtgcgtc
     4381 cgtgaaaact gttgatacag gcgacgattt cgctttttcc tccgccgaaa cggtcgcggg
     4441 cgtatttcct cgccagcttc aacgccgcct cattcgcttc cgcgcccgag ttgcagaaaa
     4501 aaaccttgtc ggcaaaactg tttgcaacca atttttgcgc caattcctgc gccggacgcg
     4561 tcgtatagat attggaaatg tgccacagct tgtgcatctg cgcgtttaaa gcatcgacaa
     4621 gggcagggtg gcagtgtccc agcgcattga cggcgatacc gcctgaaaaa tcaatatatt
     4681 cacgcccttt cgtatcccaa acgcggctgc ctgaagcgcg ttcgggaatc atcggggcaa
     4741 aggcgaaatt gggggtcaga tagttttgca taattgctcc tgattgcggt tttgctcggg
     4801 attatgcacc gtttttcaaa gcagataaag ggaaattgcc gacaatatcg ggcagcggta
     4861 aaaataaacc gaaatatttt caatcggata gatgaaaaat caaaaaaatt tcgataaaat
     4921 gcttgaggcg cggcagcgtt ttgatttaga atctccccaa tatttttatc ttcagacggc
     4981 atttcatcat gcaaggcaaa aaatttacaa ccgcttattg ctattggtac cacacagacg
     5041 tgcggtactt ttttgcgctt gcttgaaatc catcccatac gcaaaacagg ccgctcgaaa
     5101 acggggcggc ttttttgtta ccttcacaca ggtcgcccga ttcggcaaca cacgacagaa
     5161 tcaggaaaat gaccatgaat gcaatgcccc aaaccgccgc acaaaacgaa accctgcaca
     5221 cttgtagcat tattgtcgat gatgcacagg atttttcccc catgcttctc gatgcagggc
     5281 gggacgacac acttatcagc gaatcgatga ttccgcaaat ccgcaccgtt gccgccctga
     5341 tagccgccga acggcacgac ttcagccgca gcagccccgc cgagtttacc gatgccgccg
     5401 atttttttgc cgcacggatt ctcgtattgg gcgtgcgacg cttccatctg gacgtatcgc
     5461 tgcttcagat tttgaaaacc gccaacagcc gcgcccgccg ctttgccgaa aaacaccgcc
     5521 tgtttttcac acccgcacaa gccgaattga gcctgaacaa acacaaaaac cgccgcctgc
     5581 tgaccgtaga aaccgaacac gaagtcgaaa acaaaggcaa cccagtcgcc aacagcctcg
     5641 catttgtccg caaattgcac cccctgcccc tgtaaacatc acgatttgcc ggcagaatgc
     5701 ttgccaaaat tcccgacggc gatacaataa aaccgatttt ccacccaaac aggacacaca
     5761 tgaaaaaaat catcgcctcc gcgcttatcg caacattcgc actcgccgcc tgccaagacg
     5821 acacgcaggc gcggctcgaa cagcagcaga aacagattga agccctgcaa cagcagctcg
     5881 cacagcaggc agacgatacg gtttaccaac tgactcccga agcagtcaaa gacaccattc
     5941 ctgccgaagc acaggcaaac ggcaacaacg ggcaacccgt taccggtaaa gacgggcagc
     6001 agtatattta cgaccaatcg acaggaagct ggctgctgca aagcctagtc ggcgcggcgg
     6061 caggcgcgtt tatcggcaac gcgctggcaa acaaattcac acgggcaggc aaccaagaca
     6121 gtcccgtcgc ccggcgcgcg cgtgcagcct accatcagtc cgcacatccc aatgcgcgca
     6181 ccagcaggga tttgaacacg cgcagcctcc gtgcaaaaca acaggcggcg caggcgcagc
     6241 gttaccgccc gacaacgcgc ccgcccgcca attaccgccg ccccgccatg cgcggtttcg
     6301 gcagaaggcg gtaaatccgg cgtgccaatg ccgtctgaag ggctttcaga cggcattttt
     6361 gcatttgtta ggggcattgt tatgttgccg tttgattttt agacggcatt ttgtttccaa
     6421 gcgtttgatg tcgggatggc aattctgatt tacgtgcgtt ggcagggcgg cattgtcatg
     6481 ccgccgttgg gttttcagac ggcatcatat cgaaccgtca gaccataggg cgagcattct
     6541 tgcccaccgt tgcaagggcg ggattgggtg ggcaggaatg cccaccctgc atctgaaacc
     6601 cttccgtgtc attcccgtgc aggaaggaat ctagatattt gaatttacgg aaattttcaa
     6661 tcgttgccaa agcggaaaag gg
//
LOCUS       DAWGKF010000113         6484 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.113, whole genome shotgun sequence.
ACCESSION   DAWGKF010000113 DAWGKF010000000
VERSION     DAWGKF010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6484)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6484)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6484
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.113"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            13..339
                     /locus_tag="WHR07_001534"
     CDS             13..339
                     /locus_tag="WHR07_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HEZ2130737.1"
                     /translation="MGEKIKDGKNQKTVLSREEEQKICNTFTHKQAVEDFSVVIGYDE
                     IKAKNHSLSAGQYFEVKIDYVDISADEFAQKMAGFSADLDKLFAESAELEKEIKDRLA
                     MLKFNS"
     gene            350..487
                     /locus_tag="WHR07_001535"
     CDS             350..487
                     /locus_tag="WHR07_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HEZ2130738.1"
                     /translation="MKPVKLKMPSESLSDGILFGLENTYAVLSLKERIQKTKATGIYR
                     K"
     gene            complement(647..1984)
                     /gene="ribB"
                     /locus_tag="WHR07_001536"
     CDS             complement(647..1984)
                     /gene="ribB"
                     /locus_tag="WHR07_001536"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HEZ2130739.1"
                     /translation="MTDTAGLRRRNLRQWIAEHYGGLQTRFAEAVALNTGELSALLKN
                     KSFGEKKARKIEQAAKMPAFWLDTEHTARPPEHTGKHTMSHISPIPEILADIKAGKMV
                     IITDAEDRENEGDLLMAAQFVTPEAINFMIKHARGLVCLPMDGEMVEKLGLPMMTQKN
                     GAQYGTNFTVSIEAAHGITTGISAADRALTIQTAVSPTAKPADIVQPGHIFPLRAQKG
                     GVLVRAGHTEAGVDLAQMNGLIPAAVICEIINDDGTMARMPELMKFAEEHNLKIGTIA
                     DLIEYRSRTESLLEDMGNAPVQTPWGEFQQHVYVDKLSGETHLALVKGTPAADTETLV
                     RVHEPFSVMDFIQANPRHSWSLPKALERVQQAESGVVILLHRTEDGASLLDRTLPKGA
                     NQAYKWDSKSYGIGAQILVGLNVKKLRVLGQPSSFTGLTGFGLEVVGFEEAEK"
     gene            complement(2206..3222)
                     /locus_tag="WHR07_001537"
     CDS             complement(2206..3222)
                     /locus_tag="WHR07_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ2130740.1"
                     /translation="MIFSIIVPIYNVEKYLRCCVDSVLAENFADYEMILVDDGSPDGC
                     GKICDEYAGKYPHIKVIHQENGGLSDARNAGIRAAKGDYLIFLDSDDYWADTNRSKNA
                     RGGGILFDLQQLADKKVDLILHPSSFNYRDIPKGADFSDNDFVRHFETLVEGRYYIAN
                     AWTKIVRREIIIKNNLFFPKGYIHEDFPYSLQLARFIKTFAFYDNPFYQYRVLGGSIS
                     HNIKYKNFSDVLTHLDRGVDFLVENKNSPIYGGLQKFVFDNIGYLRSILVRLYFSKNI
                     ILIYRKYFSFKEKCRKIFGAKAIRPVFIGKTAFIIGLPILRLLVPPMLYPAIKAVYQK
                     FFSE"
     gene            complement(3390..3983)
                     /gene="ribA"
                     /locus_tag="WHR07_001538"
     CDS             complement(3390..3983)
                     /gene="ribA"
                     /locus_tag="WHR07_001538"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HEZ2130741.1"
                     /translation="MSEMLNHVASCRLPTEWGVFTMHGFEEANGQEHVALTVGNFSDG
                     NPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQTEGRGIIVYLRQEGRGIGLINK
                     IRAYHLQDQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLK
                     DAGINVVERIPLHVGENLENKRYLQTKADKLGHLMSE"
     gene            complement(3976..4653)
                     /locus_tag="WHR07_001539"
     CDS             complement(3976..4653)
                     /locus_tag="WHR07_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130742.1"
                     /translation="MPAALIKDFLLTQGLKLPLDEVRAAYLTAQTVMDMGTASIDRSV
                     LWRSDEGWKLADYLSCDNVREDALKRLFMALDSVFSRSTGVQSAAVYALMPSENQAFQ
                     LICLSRQGEVLENLWDLDEAAGKVSLACRSAQSGWMNVASDVRRWLDLGELSGERNHA
                     SAAQISIPVCTESGGVLGVVHVEFECAECADEAAQAEWVALALALSEPLKLLLGMSAG
                     KDGSEDV"
     gene            4807..4891
                     /locus_tag="WHR07_001540"
     tRNA            4807..4891
                     /locus_tag="WHR07_001540"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4841..4843,aa:Leu,seq:tag)
     gene            5412..6446
                     /gene="purM"
                     /locus_tag="WHR07_001541"
     CDS             5412..6446
                     /gene="purM"
                     /locus_tag="WHR07_001541"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HEZ2130743.1"
                     /translation="MSTSLSYRDAGVDIDAGDQLVENIKPFAKRTMRPEVLGDLGGFG
                     ALVEIGKKYKNPVLVSGTDGVGTKLKLAFDWDKHDTVGIDLVAMSVNDILVQGAEPLF
                     FLDYFACGELDVPRATDVIKGIAQGCEESGCALIGGETAEMPGMYPVGEYDLAGFAVG
                     VVEKENVITGRSIGAGDVVLGLASNGAHSNGYSLIRKIIERDNPDLDAEFDNGKTLRE
                     AVIAPTRLYVKPILAALEKFTIKGMAHITGGGITENVPRVLPENTVAQIDAKSWELPK
                     LFQWLQKAGNVETQEMYRTFNCGIGMVVIVAAEDADAVQDLLGEQGETVYRLGLIRER
                     QGDEHQTQVA"
BASE COUNT         1606 a         1591 c         1691 g         1596 t
ORIGIN      
        1 gacgcatcgg gcttgggcga aaaaatcaaa gacggcaaaa accaaaaaac cgtactttct
       61 cgcgaagaag aacaaaaaat ctgcaatact ttcacgcaca aacaagcagt ggaagatttc
      121 agcgtggtga tcggctacga tgaaatcaaa gcgaagaatc acagcttgtc ggcggggcag
      181 tatttcgagg taaagattga ttatgtggat atttccgccg acgaatttgc gcaaaaaatg
      241 gcgggatttt cagcggattt ggataaactt ttcgccgaat ctgccgaatt ggaaaaagag
      301 attaaggata gattggcgat gttgaaattc aattcataaa taccgatgaa tgaaaccggt
      361 caaacttaaa atgccgtctg aaagcctttc agacggcatt ttgtttggtt tggaaaatac
      421 ttatgccgtt ctttccctga aagagagaat ccaaaaaacc aaagccacag gaatttatcg
      481 gaaatgacaa aaacccgacg aaccggattc ccgcctgcgc gggaatgacg aattagaagt
      541 tacccgaaat ttgcaaaaac aaaatccaac ccaacagacc gggttttcgt ttgcacggaa
      601 ataatgcaat aaataaagca aatataaagt atttgaattt actatattat ttttccgctt
      661 cttcaaagcc gacgacttcc aaaccgaagc cggtcagacc ggtgaaagat gagggctgcc
      721 cgaggacgcg cagttttttg acgttgaggc cgacgaggat ttgtgcgccg atgccgtagc
      781 ttttgctgtc ccatttgtag gcttggtttg cgcctttggg tagggtgcgg tcgagcaggg
      841 atgcgccgtc ttcggtgcgg tgcagaagga tgacgacgcc gctttctgcc tgttggacgc
      901 gctcgagtgc tttgggcaat gaccatgaat ggcgcgggtt ggcttgaatg aagtccatca
      961 cactgaaggg ttcgtggacg cggacgaggg tttcggtgtc ggcggcgggc gtgcctttga
     1021 cgagggcgag gtgggtttcg ccggagagtt tgtcgacgta aacgtgttgt tggaactcgc
     1081 cccacggggt ttgtacaggc gcattgccca tgtcttcgag caggctttcg gtacggctgc
     1141 ggtattcgat gaggtcggca atggtgccga ttttaaggtt gtgttcttcg gcaaacttca
     1201 tcagctcggg catacgcgcc atggtgccgt cgtcgttgat gatttcacag atgacggcgg
     1261 caggaatcag cccgttcatt tgcgccaagt cgacgccggc ttcggtgtgt ccggcgcgga
     1321 cgagtacgcc gcctttttgg gcgcgaagcg ggaagatatg accgggttgg acgatgtctg
     1381 cgggtttggc ggtcggggaa acggcggttt gaatagtcag ggcgcggtcg gcggcggaaa
     1441 tgccggtggt aatgccgtgt gcggcttcga tggagacggt aaagttggtg ccgtattgcg
     1501 cgccgttttt ttgggtcatc atcggcagcc cgagtttttc gaccatttcg ccgtccatcg
     1561 gcaggcagac caagccgcgc gcgtgtttga tcatgaagtt gatggcttcg ggcgtgacga
     1621 attgcgccgc catcagcagg tcgccttcgt tttctcggtc ttcggcatcg gtgatgatga
     1681 ccattttgcc ggctttgatg tcggcaagga tttcggggat gggggaaata tgggacatgg
     1741 tgtgttttcc tgtgtgttcg ggcgggcggg cggtgtgttc ggtatcgagc cagaaagcgg
     1801 gcatttttgc cgcctgttcg attttacggg cttttttctc gccgaaggat ttgtttttca
     1861 aaagggcgga gagttcgcct gtgttgaggg caacggcttc ggcaaaacgg gtttgcaaac
     1921 cgccgtagtg ttctgctatc cattgccgca ggttgcggcg gcgcagaccg gctgtgtcgg
     1981 tcatcgtttc atcctttgta gaaatcggat gtagcggatt gtaatcgcgt atttaccaaa
     2041 aagcaaatct gtttttttcg ccaaaccgaa ttatttgctt tttggtaaac agatgccgtc
     2101 tgaagccgga ttcgtggctt cagacggcat tgccgcaatc cttgccggcc gggggctgtt
     2161 tgtcccaact tcccgcgcac ttctgatttg gggtttgccg gaagcttatt ccgaaaaaaa
     2221 tttctgataa acggccttga ttgccgggta cagcataggc ggtacgagca ggcgcaatat
     2281 cggcaatcct atgatgaatg cggtcttccc gataaaaacc ggacggattg ccttcgcgcc
     2341 gaatatcttt ctgcattttt ctttaaatga aaaatatttc cggtagatga ggataatgtt
     2401 tttggaaaaa taaagcctta ccaatataga cctcagatag ccgatattgt cgaagacaaa
     2461 tttttgcaaa ccgccgtaga tgggggaatt tttgttttcg actaaaaaat ccacaccccg
     2521 gtcgagatgc gtcagcacat cgctgaaatt tttgtatttg atgttgtggc tgatagagcc
     2581 gccgagaacg cggtactggt aaaaagggtt atcgtaaaag gcaaaagtct tgataaaacg
     2641 cgccaattgc aaactgtacg ggaaatcctc gtgaatgtat ccttttggga aaaacagatt
     2701 gtttttgatg attatttccc gcctgacgat ttttgtccac gcgttggcga tatagtaccg
     2761 cccctccacc agcgtttcaa aatggcggac aaaatcatta tccgaaaagt ccgccccttt
     2821 ggggatgtcg cggtaattga aggacgaggg atgcaggatc aaatcaacct ttttgtctgc
     2881 aagttgttgt aaatcaaaga gaatcccccc cccccgcgcg ttttttgaac gattggtgtc
     2941 ggcccaatag tcgtcgctgt ccaaaaagat taggtaatcg ccttttgccg cccggatacc
     3001 ggcgttgcgg gcatccgaca gcccgccgtt ttcttgatga atcactttta tatgcggata
     3061 tttgcctgca tattcgtcgc aaatcttccc gcagccgtcc ggcgaaccgt catcgaccaa
     3121 aatcatttca taatcggcaa aattttcggc aagcacggaa tccacgcagc agcggaggta
     3181 tttttccaca ttgtaaatag ggacgatgat ggagaaaatc ataaatatca atccattata
     3241 ttaagatgtt tgcgcgtatg cctcaaaccc gcacccgcaa tgcgtttgca tccgcaccct
     3301 gtaactttat aaaacttatt gctttatcaa ggtatggaaa cctgtttccc gaaaggcggc
     3361 gcaggatgcc cgttccctgc atctttgcct tattccgaca tcagatgccc cagcttgtct
     3421 gctttggttt ggaggtagcg tttgttttca aggttttccc cgacgtgcag ggggatgcgt
     3481 tcgaccacgt taatccccgc atctttcagg gtttggattt tttcggggtt gttggtcagc
     3541 agtttgaccg agcggatgcc cagatattcg tagatagatt gcgccaaacg gaaatcgcgg
     3601 gcatcgacgg gcagcccgag tgccaaattg gcttcaaccg tatccatacc ttggtcttgc
     3661 agatgatagg cgcggatttt gttaatcagc ccgatgccgc gtccttcctg acgcagatag
     3721 acgatgatgc cgcgcccctc tgtctgtacc gccctcatgg ccgcttcaag ttgaggtccg
     3781 cagtcgcatt ttctcgagaa cagcgcatcg cccgtcaggc attcggagtg gatgcgcgtc
     3841 agaaccggat tgccgtctga aaaattaccg acggtcagcg cgacgtgttc ctgcccgttt
     3901 gcctcttcaa agccgtgcat cgtaaatacg ccccattcgg tcggcaggcg gcaggatgcc
     3961 acatggttca acatttcaga catcttcact cccatctttt ccggcagaca tacccaacag
     4021 cagtttcaaa ggttcggaca aagccaaggc aagagccacc cattccgcct gcgctgcctc
     4081 atccgcacac tctgcgcatt caaattccac atgaaccacg cccaacacac cgccactttc
     4141 cgtgcagacc ggaatggaaa tttgcgccgc cgaagcatga ttgcgttctc ccgaaagctc
     4201 ccccaaatcc aaccaacggc gtacatccga ggcaacattc atccaaccgc tttgcgccga
     4261 acggcaagcc agcgaaacct tgcctgccgc ttcatccaaa tcccacaggt tttccaaaac
     4321 ctcgccctgt cgggacaggc atatcagttg gaaagcctgg ttttcagatg gcatcaaggc
     4381 atagaccgcc gcactctgca cgcctgtcga gcgcgaaaac accgaatcca aagccatgaa
     4441 aagccgtttc agtgcatctt cgcggacatt gtcgcacgac aggtaatcgg caagtttcca
     4501 accctcatca ctgcgccaca aaaccgaacg gtctatcgaa gccgtcccca tatccattac
     4561 cgtctgcgcc gtcagatacg ccgcccgaac ctcgtcaagc ggcagcttca aaccctgagt
     4621 cagcagaaaa tccttaatca aagcagcagg catacccaaa ttccgtcaat aaaaacaaaa
     4681 aaccgcccga ttccgatgtc aggcggacga aaaacagatt ttaccgcccc aaaccccaag
     4741 ccatcaacag ccccgccgaa aaccttgcac aaaaaaacaa aatctgtata atcgtccaat
     4801 tcccatgcgg acgtggcgaa attggtagac gcaccagatt taggttctgg cgccgagagg
     4861 tgtgagagtt cgagtctctc cgtccgcacc aataatgata aataaattat atagttaatg
     4921 cttatcggga caaattagtg ccacaaaaca taagtcgtct gcttttcagc gggcggcttt
     4981 tttatctgcc tatatgtttc aacacgcaga acggtacata aagtgccgcc atttgttccg
     5041 caccgaatcg gaaacgggtg cttccgcccg caatcagatt caccgcccct aatgccgggg
     5101 tttcaaccgg aaagaagaaa atattgattt tgatgatggc atcaaaaaac cccttccgct
     5161 cgtctgccaa aaggaatggt taagaaaagc aatgcgtctt tatgatggaa cgcgatatat
     5221 aaggaattga gggaaagggc aggcgggttt ctgcccgtta atcctgcgga cggtcccgcc
     5281 aaacccgaca cgcgcgggca tatggcggac tgtttacaat attgtctaaa aatctgaacc
     5341 tgcaaacgtg aaataaggta gaatacgccc cgttatttta ccgtccaatc cccatttacc
     5401 aaggaaaaac gatgagtact tcattgagtt accgcgatgc aggtgtcgat atcgacgcag
     5461 gcgaccaact ggtcgaaaac atcaaaccgt ttgccaaacg caccatgcgt ccggaagtat
     5521 tgggggattt gggcggtttt ggcgcattgg tcgaaatcgg caagaaatat aaaaatcccg
     5581 tattggtcag cggtacggac ggcgtgggta ccaagctcaa acttgccttt gattgggata
     5641 aacacgatac ggtgggcatc gaccttgttg caatgagtgt caacgatatt ttggttcaag
     5701 gagcagaacc tctgtttttc ttggattatt tcgcctgcgg cgaattggat gttccgcgcg
     5761 caaccgatgt catcaaaggc attgcacaag gttgcgaaga atccggctgc gccctgattg
     5821 gcggggaaac tgccgaaatg ccgggtatgt atcccgtcgg agaatacgat ttggcgggtt
     5881 ttgccgtcgg cgtagtggaa aaagagaatg tcattaccgg ccgcagcatc ggcgcgggcg
     5941 atgtggtatt gggtttggct tccaacggcg cacattcaaa cggctattcc cttatccgta
     6001 aaatcatcga acgcgacaat cccgatttgg atgccgagtt tgataatggc aaaaccttgc
     6061 gtgaggctgt tattgcgccg acccgtctgt atgtgaaacc gattcttgcc gctttggaaa
     6121 aatttaccat taaaggtatg gcacacatta ccggcggcgg cattaccgaa aacgtgccgc
     6181 gcgtgttgcc tgaaaacacg gttgcacaaa tcgatgctaa atcgtgggaa ttgcccaagc
     6241 tcttccaatg gcttcaaaag gcgggcaatg tggaaaccca agaaatgtac cgaaccttta
     6301 actgcggcat cggcatggtc gttattgttg ctgccgaaga tgccgatgcg gttcaggatc
     6361 tcttgggtga acaaggtgaa acagtttacc gtttaggttt gatccgtgag cgtcagggag
     6421 acgagcatca aacccaggtt gcctgattgc ttctatagcg aaatgccgtc tcaaacatgg
     6481 gttt
//
LOCUS       DAWGKF010000114         6436 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.114, whole genome shotgun sequence.
ACCESSION   DAWGKF010000114 DAWGKF010000000
VERSION     DAWGKF010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6436
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.114"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            109..1650
                     /locus_tag="WHR07_001542"
     CDS             109..1650
                     /locus_tag="WHR07_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEZ2130744.1"
                     /translation="MDGRRWAVWGAFALLPSAFLAAMVVAPLWAVAAYDGLAWRAVLS
                     DAYMLKRLAWTVFQAAATCVLVLPLGVPVAWVLARLAFPGRALVLRLLMLPFVMPTLV
                     AGVGVLALFGADGLLWRGWQDTPYLLLYGNVFFNLPVLVRAAYQGFVQVPAARLQTAR
                     TLGAGAWRRFWDIEMPVLRPWLAGGVCLVFLYCFSGFGLALLLGGSRYATVEVEIYQL
                     VMFELDMAVASVLVWLVLGVTAAAGLLYAWFGRRACSDKAVSPVMPSEPQSVGEYVLL
                     AFAAAVLSVCCLFPLLAIVVKAWSAGESWRVLMESETWQAVWNTLRFSAAAVFAAAVL
                     GVVYAAAARRSAWMRGLMFLPFMVSPVCVSAGVLLLYPQWTASLPLLLAMYALLAYPF
                     VAKDVLSAWDALPPDYGRAAAGLGANGFQTACRITFPLLKPALRRGLTLAAATCVGEF
                     AATLFLSRPEWQTLTTLIYAYLGRAGEDNYARAMVLTLLLAAFALGIFLLLDGGEGGK
                     RTETL"
     gene            1679..2278
                     /locus_tag="WHR07_001543"
     CDS             1679..2278
                     /locus_tag="WHR07_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEZ2130745.1"
                     /translation="MSELDNILAHNRQFVESGEYEKYFTDKYPERGLAVLSCMDARII
                     GLLPDALGLKNGDAKLIKNAGALVTHPWGSVMRSLLVAVFELKVREIMVIAHHDCGMQ
                     GLNAEEFLGRVRESRIPEDRIETLRYAGIDLDGWLTGFDNVEDSVRHTVDLIRNHPLM
                     PRHIAVHGLVIHPVTGKLTLVVDGSVSDGMDLSEGMETS"
     gene            2275..2880
                     /gene="nadD"
                     /locus_tag="WHR07_001544"
     CDS             2275..2880
                     /gene="nadD"
                     /locus_tag="WHR07_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HEZ2130746.1"
                     /translation="MKKIGLFGGTFDPIHNGHLHIARAFADEIGLDAVVFLPTGGPYH
                     KDAASASAADRLAMVELATAEDARFAVSDCDIVREGATYTFDTVQIFRQQFPSAQLWW
                     LMGSDSLMKLHTWKKWQMLVRETNIAVAMRQGDSLHQTPRELHAWLGKSLQDGSVRIL
                     SAPMHNVSSTEIRRNLASQGVSDGIPPAAARYIREHGLYEK"
     gene            2939..3325
                     /gene="rsfS"
                     /locus_tag="WHR07_001545"
     CDS             2939..3325
                     /gene="rsfS"
                     /locus_tag="WHR07_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEZ2130747.1"
                     /translation="MNEQELQDLQKMVGVAVNALEDIKAKDISVLETQDKTSLFARMI
                     IASGDSTRQVKALANNVAVDLKEAGFEILSTEGDSGEWTLVDAGDLVVHVMLPAVRDF
                     YDIDTLWGGEKPSFHAGMQKPWHAAD"
     gene            3379..3849
                     /gene="rlmH"
                     /locus_tag="WHR07_001546"
     CDS             3379..3849
                     /gene="rlmH"
                     /locus_tag="WHR07_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEZ2130748.1"
                     /translation="MNITVLAVGTKMPRWVDEAVAEYAKRFGRDVAYVLKEIKPEKRG
                     AGVNAAQGMAAEEKRILEAIPQGAFLVVLDERGKAPTSVELAEHLKTWQQNGEHVCFV
                     IGGADGMTDRLKQQARMMMRLSSLTLPHGMVRVLLTEQLYRAASILHNHPYHRE"
     gene            3924..4190
                     /locus_tag="WHR07_001547"
     CDS             3924..4190
                     /locus_tag="WHR07_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HEZ2130749.1"
                     /translation="MARMVFCVKLNKEAEGMKFPPLPNELGKRIFENVSQEAWAAWTR
                     HQTMLINENRLSLADPRAREYLAQQMEQYFFGDGADAVQGYVPQ"
     gene            4347..5030
                     /locus_tag="WHR07_001548"
     CDS             4347..5030
                     /locus_tag="WHR07_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1 family protein"
                     /protein_id="HEZ2130750.1"
                     /translation="MQHDVYDYTAHTVSKNTVLQKTYRLLGFSFIPAAAGAALAANAG
                     FNFYAAFGSRWIGFAVVLAFFYGMIHFIEKNRYSNTGVTLLMVFTFGMGVLIGPVLQY
                     ALHIADGAKIVGIAAAMTAAVFLTMSALARRTRLDMNALGRFLTVGAVILMVAVVANL
                     FLGIPALALTISAGFVLFSSLMIMWQVRTVIDGGEGSHISAALTLFISLYNIFSSLLN
                     ILLSLNGED"
     gene            5154..5666
                     /gene="coaD"
                     /locus_tag="WHR07_001549"
     CDS             5154..5666
                     /gene="coaD"
                     /locus_tag="WHR07_001549"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEZ2130751.1"
                     /translation="MLPNTPRRAVYAGSFDPPTLGHLWMIRQAQSMFDELIVAIGINP
                     DKRSTYTVAERQDMLCDITKMFPNVRTDVFENRFLVHYAREVDAGFIVRGIRSASDYE
                     YERSMRHINSDLAPEISTVFLMPPREIAEVSSTMVKGLVGPEGWTETIHRYVPQAVYE
                     KILAEHQHEN"
     gene            5698..6351
                     /locus_tag="WHR07_001550"
     CDS             5698..6351
                     /locus_tag="WHR07_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01621 family pseudouridine synthase"
                     /protein_id="HEZ2130752.1"
                     /translation="MLEILFRHQDFVAINKPGGISVHQDSGETGLARTLAIQLGVERV
                     WLLHRLDKQTSGILLFALNRESASALSGQFAGKSIKKTYLALSDRKPSKKQGWIKGGM
                     EKSRRGMWKLTRNTENIAVTRFHSISIAEKLRLFILEPHTGKTHQLRVAMKSLGSPIL
                     GDSLYGGTESETMFLYAWKIQFAYQNRQIEIVAPLKNEWQTENISHALEEFYMAKAG"
BASE COUNT         1405 a         1708 c         1858 g         1465 t
ORIGIN      
        1 ttcagacggc gggaggaagg cggatacggt atgtagtcgg attgaaatat acggtatgtg
       61 gggcttttgg gtacaatcgc aacatcagtg tttcaagtgg ggaaggcgat ggatggacgg
      121 cgttgggcgg tatggggtgc ttttgccctg ctgccttcgg cttttttggc ggcaatggtc
      181 gttgcgcctt tgtgggcggt ggcggcgtat gacggtttgg cgtggcgcgc ggtgctgtcg
      241 gatgcctata tgctcaaacg tttggcgtgg acggtatttc aggcagcggc aacctgtgtg
      301 ctggtgctgc ctttgggcgt gcctgtcgcg tgggtgctgg cgcggctggc gtttccgggg
      361 cgggctttgg tgctgcgcct gctgatgctg ccgtttgtga tgcccacgtt ggtggcgggc
      421 gtgggcgtgc tggctctgtt cggggcggac ggtctgttgt ggcgcggctg gcaggatacg
      481 ccgtatctgt tgttgtacgg caatgtgttt tttaacctgc ccgtgctggt cagggcggcg
      541 tatcaggggt ttgtgcaagt gcctgcggca cggcttcaga cggcacggac gttgggcgcg
      601 ggggcgtggc ggcggttttg ggacattgaa atgcccgttt tgcgcccgtg gcttgccggc
      661 ggcgtgtgcc ttgtcttttt gtattgtttt tccgggttcg ggctggcatt gctgctgggc
      721 ggcagccgtt atgccacagt cgaagtggaa atttaccagt tggtcatgtt cgaactcgat
      781 atggcggttg cttcggtgct ggtgtggctg gtgttggggg taacggcggc ggcagggttg
      841 ctgtatgcgt ggttcggcag acgcgcgtgt tcggataagg cagtttctcc tgtgatgccg
      901 tctgaaccgc agtcggtcgg ggaatatgtg ctgctggcgt ttgcggcggc ggtgttgtct
      961 gtgtgctgcc tgtttccttt gttggcaatt gttgtgaaag cgtggtcggc cggcgaatcg
     1021 tggcgtgtgt taatggaaag tgaaacgtgg caggcggtgt ggaatacttt gcgcttctcg
     1081 gcggcggcgg tgtttgcggc ggcggttttg ggtgtggtgt atgcggcggc ggcgcggcgg
     1141 tcggcgtgga tgcgcgggct gatgtttttg ccgtttatgg tgtcgccggt ttgtgtttcg
     1201 gcgggcgtgc tgctgcttta tccgcagtgg acggcttcgt tgccgttgct gctggcgatg
     1261 tatgcgctgc tggcgtatcc gtttgtggca aaagatgttt tgtcggcttg ggacgcactg
     1321 ccgccggatt acggcagggc ggcggcgggt ttgggcgcaa acggctttca gacggcatgc
     1381 cgcatcacgt tccccctctt gaaaccagcg ttgcggcgcg gtctgacttt ggcggcggca
     1441 acctgcgtgg gcgaatttgc ggcaaccttg ttcctgtcgc gtcccgagtg gcagacgctg
     1501 acgactttga tttatgccta tttgggacgc gcgggtgagg ataattacgc gcgggcgatg
     1561 gtgctgacat tgctgttggc ggcgttcgcg ctgggtattt tcctgctgtt ggacggcggc
     1621 gaaggcggaa aacggacgga aacgttataa tgcgaaccct ttttcagagg acggcaaaat
     1681 gagcgagttg gataacatcc ttgcccataa ccggcagttt gtcgagtcgg gcgaatatga
     1741 aaaatacttt accgacaaat accccgaacg cgggctggca gttttgtcct gtatggatgc
     1801 gcggattatc gggctgctgc ccgacgcgtt gggtttgaaa aacggcgatg ccaagctgat
     1861 taaaaatgcc ggcgcgctgg ttacgcaccc gtggggttcg gtgatgcgga gccttttggt
     1921 tgccgtgttt gaactgaagg tcagagagat tatggtcatc gcccatcacg attgcggtat
     1981 gcaggggctg aatgccgaag aattcctcgg gcgcgtccgg gaaagccgga ttcccgaaga
     2041 ccgtatcgaa accctgcgtt atgccggtat cgacctcgac ggctggctga ccggtttcga
     2101 caacgtcgaa gacagcgtgc gccacacggt ggaccttatc cgtaaccatc cgctgatgcc
     2161 gcgccatatc gccgttcacg gactggtcat ccatcccgtt accggcaaac tgacgctggt
     2221 tgtggacggc agtgtttcag acggcatgga cttatcggaa ggaatggaaa catcatgaag
     2281 aaaatcggac tgttcggcgg cactttcgac ccgatacaca acgggcatct ccacatcgcc
     2341 cgcgcctttg ccgacgaaat cggcttggac gcggttgttt tcctgccgac aggcggcccg
     2401 tatcacaaag acgcagcctc cgcttccgcc gccgaccgcc ttgccatggt cgaactggcg
     2461 acggcagaag acgcgcgttt tgccgtcagc gattgcgaca tcgtccgaga aggtgcaacc
     2521 tatacttttg ataccgtcca aatcttccgc cagcagttcc catccgcgca actctggtgg
     2581 ctgatgggca gcgacagcct gatgaagctg cacacatgga aaaaatggca gatgctcgtg
     2641 cgcgaaacca atatcgccgt cgccatgagg cagggcgaca gcctgcacca aaccccgcgc
     2701 gaactgcacg cgtggctggg caagtccctt caggacggca gcgtccgcat cttgtccgcc
     2761 ccgatgcata atgtgtcgtc aacggaaatc cgccgcaacc ttgccagcca aggcgtttca
     2821 gacggcatcc cgcctgccgc cgcacgctac atccgcgaac acggtttgta tgaaaaataa
     2881 agtcaaatca gtaagaaacg gctataatgc cgtctgaaaa catcccgtta ggaaaataat
     2941 gaacgaacaa gaactgcaag acctgcaaaa aatggtcggg gtcgccgtca acgccctcga
     3001 agacatcaaa gccaaagaca tttccgttct cgaaacgcaa gacaaaactt cgctgtttgc
     3061 cagaatgatt atcgccagcg gcgacagtac gcgccaagtc aaagcactgg ccaacaacgt
     3121 tgccgtcgat ttgaaagaag ccggttttga aatcctcagc accgaaggcg acagcggcga
     3181 atggacgttg gttgatgcag gagacctcgt cgtccacgtt atgctccccg ccgtgcgcga
     3241 cttctatgat atcgacaccc tttggggcgg cgagaaaccg agtttccacg ccggaatgca
     3301 gaagccgtgg cacgcggcag actgattccc gatgccgtct gaatgttcag acggcatttt
     3361 cctgtaaggg agaaagcatt gaacatcacc gttttggcag tcggcaccaa aatgccgcgc
     3421 tgggttgatg aggccgtcgc cgaatacgcc aaacgcttcg gacgcgacgt cgcctacgta
     3481 ctcaaagaaa tcaaacccga aaaacgcggc gcgggcgtga atgccgccca aggaatggcg
     3541 gcggaagaaa aacgcatcct cgaagccata ccgcaaggcg cgttcctcgt cgtccttgac
     3601 gaacgcggca aagcaccgac ctccgtcgag ctggcggaac acctcaaaac ttggcagcaa
     3661 aacggcgaac acgtctgctt cgtcatcggc ggcgcggacg gcatgaccga ccgcctcaaa
     3721 cagcaggccc gcatgatgat gcgcctgtcc agcctgaccc tgccgcacgg gatggtgcgc
     3781 gtccttctga ccgaacaact ctaccgcgcc gcctccatcc tgcacaacca cccctaccat
     3841 cgggaataag aaggcttttg tccgcactcc caatcggtta aaatcccccc gttatttctg
     3901 aacacacagc aaaggaatcc gctatggcac gcatggtatt ctgcgtcaag ctcaacaaag
     3961 aagccgaagg catgaaattt ccgccgcttc ccaacgaatt gggcaagcgc atttttgaaa
     4021 acgtatcgca agaagcgtgg gcggcgtgga cgcgccacca aacgatgctg attaacgaaa
     4081 accgtttaag cctcgccgat ccgcgcgcgc gcgaatacct ggctcagcag atggagcagt
     4141 atttcttcgg cgacggcgcg gatgccgttc agggatacgt tccgcaataa cggttttccg
     4201 ttttgaacac aggctgtccg aaactgcttc agacggcctt taaaatacgc cggacaactt
     4261 tatcttcacg caaccggaca aattttgaca ttgggcaatg ttaaaatccc ccattattcc
     4321 caaccgcgct ttcaggagca gatgatatgc aacacgacgt ttacgactac accgcgcata
     4381 cggtttctaa aaacaccgtc ctgcagaaaa cctaccgcct gctcggattt tcattcattc
     4441 cggcagccgc aggcgcggca cttgccgcca atgccggttt caatttttac gccgccttcg
     4501 gttcgcgctg gatagggttt gccgtcgtgt tggcgttttt ctacggtatg atccacttca
     4561 tcgagaaaaa ccgttacagc aataccggcg ttaccctgct gatggtattc acattcggta
     4621 tgggcgtatt gatcggcccc gtgctgcaat acgcgctcca tattgccgac ggtgcgaaaa
     4681 tcgtcggcat tgccgccgcg atgaccgccg ccgtcttttt aacgatgtcc gccttggcgc
     4741 gccgaacccg gctcgatatg aacgcgctcg gacgcttcct gaccgtaggt gcggtcattc
     4801 tgatggtcgc cgtggttgcc aatctgtttt tgggtattcc cgcactcgcc ctgaccattt
     4861 ccgccggttt tgtcttgttc agttccttaa tgattatgtg gcaggtacgc accgtcatcg
     4921 acggcggcga aggcagccac atcagcgcgg cactgacact gtttatctcg ctttacaaca
     4981 tcttcagcag cctgctgaac atcctgttgt ctttaaacgg cgaggattga tgtcggtaaa
     5041 acgccgtccg actatgccgt ctgaaaatgc ttcagacggc attttacttt gggcatacaa
     5101 tacggatgca cacgcaccaa cacacagccg gctatgaagc cgggaggaat caaatgttac
     5161 cgaatacacc gcgccgcgcc gtttatgccg gcagtttcga tccgcccaca ttggggcatc
     5221 tgtggatgat acggcaggcg caatctatgt ttgacgaact catcgtcgcc atcggcatta
     5281 accccgacaa acgcagcacc tataccgtcg ctgaaaggca ggatatgttg tgcgatatta
     5341 ctaaaatgtt tcccaacgtc agaaccgatg tatttgaaaa ccgatttctg gtgcattatg
     5401 cccgtgaggt agatgcagga ttcatcgtgc gcggcatccg ttctgcttcg gattacgaat
     5461 acgaacgttc catgcgccac atcaacagcg acctcgcccc cgaaatatcc accgtattcc
     5521 tcatgccgcc gcgcgaaatc gccgaagtgt cgtccactat ggtcaaagga ctggtcgggc
     5581 cggaaggctg gacggaaacg atccaccgct acgtgccgca agctgtgtac gaaaaaatcc
     5641 ttgccgaaca tcaacacgaa aattgaaccc ttctattttt gcaaggcata tatggatatg
     5701 ttggaaattt tgttccgcca tcaagacttc gtcgccatca acaaaccggg cggcatatcc
     5761 gtccaccaag acagcggcga gaccggactg gcccgaacac tcgccataca gttgggcgta
     5821 gagcgtgtgt ggctgctgca ccgattggac aaacagacca gcggcatttt actgtttgcc
     5881 ctcaacagag aaagcgcgtc cgcccttagc ggacagtttg ccggcaaaag catcaaaaaa
     5941 acctatttgg cactatccga ccgcaaaccg tccaaaaagc agggttggat taaaggcgga
     6001 atggaaaaat ccagacgcgg aatgtggaag ttgacgcgca atacagaaaa tatcgccgtt
     6061 acccgattcc acagcatcag tatcgccgaa aaactgcggc tgttcatcct ggaaccgcat
     6121 acgggcaaaa cgcaccaatt gagagtggcg atgaaaagtt tgggcagtcc gattctgggt
     6181 gacagcttat acggcggaac agaatccgaa accatgtttc tgtatgcatg gaaaatacaa
     6241 tttgcctacc aaaaccgaca aatcgaaatt gttgcaccct taaaaaacga atggcagact
     6301 gaaaatatct ctcatgcgct ggaagaattt tatatggcaa aagcaggtta ataaatataa
     6361 attaatttat aaacaatatg ataaatattt ttataaaaat ttttcaagaa aacggttgac
     6421 tgcaaatctc ttcaag
//
LOCUS       DAWGKF010000115         6416 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.115, whole genome shotgun sequence.
ACCESSION   DAWGKF010000115 DAWGKF010000000
VERSION     DAWGKF010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6416)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6416)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6416
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.115"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            175..1233
                     /gene="alr"
                     /locus_tag="WHR07_001551"
     CDS             175..1233
                     /gene="alr"
                     /locus_tag="WHR07_001551"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEZ2130753.1"
                     /translation="MRPLNVQIRLGNLRHNYQILKEMHGGKLLAVVKADAYGHGAVRC
                     AFALADLADGFAVATIDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQ
                     WQLEALLIRHWKKPVKVWLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFS
                     CADEPESGMTEIQMEAFDLGTEGLEGEESLANSAAILNVPEARRDWGRAGLALYGISP
                     FGGSDDRLKPVMRLSTRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRR
                     APSNSPVAVDGKLTRVIGRVSMDMMTIELDASQEGLGHEVELWGDTVNINTVAEAAGT
                     IPYELMCNIKRAKFTYIE"
     gene            complement(1297..2652)
                     /locus_tag="WHR07_001552"
     CDS             complement(1297..2652)
                     /locus_tag="WHR07_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PFL family protein"
                     /protein_id="HEZ2130754.1"
                     /translation="MSIQSGEILETVKMVADQNFDVRTITIGIDLHDCISTDIDVLNQ
                     NIYNKITTVGKDLVATAKYLSAKYGVPIVNQRISVTPIAQIAAASKADSYVSVAQTLD
                     KAAKAIGVSFIGGFSALVQKGMSPSDEVLIRSIPEAMKTTDIVCSSINVGSTRAGINM
                     DAVKLAGETIKRTAEITPEGFGCAKIVVFCNAVEDNPFMAGAFHGSGEADAVINVGVS
                     GPGVVKAALENSDATTLTEVAEVVKKTAFKITRVGELIGREASKMLNIPFGILDLSLA
                     PTPAVGDSVARILEEMGLSVCGTHGTTAALALLNDAVKKGGMMASSAVGGLSGAFIPV
                     SEDEGMIAAAEAGVLTLDKLEAMTAVCSVGLDMIAVPGDTPAHTISGIIADEAAIGMI
                     NSKTTAVRIIPVTGKTVGDSVEFGGLLGYAPVMPVKEGSCEVFVNRGGRIPAPVQSMK
                     N"
     gene            complement(2668..2940)
                     /locus_tag="WHR07_001553"
     CDS             complement(2668..2940)
                     /locus_tag="WHR07_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HEZ2130755.1"
                     /translation="MNNSVITVIGKDRVGIVYDVSKILAENRINILNISQQLMDDFFT
                     MIILVDTSKCPKSRQEVLDLFAEESKKLALDIRMQNEEIFQAMHRI"
     gene            complement(3066..3803)
                     /locus_tag="WHR07_001554"
     CDS             complement(3066..3803)
                     /locus_tag="WHR07_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
                     /protein_id="HEZ2130756.1"
                     /translation="MKKLSRIVFSTVLLGFSAALPAQTYSVYFNQNGKLTATMSSAAY
                     IRQYSVAEGIAHAQDFYYPSMKKYSEPYIVASTQIKSFVPTLQNGMLILWHFNGQKKM
                     AGGFSKGKPDGEWVNWYPNGKKSAVMPYKNGLSEGTGYRYYRNGGKESEIQFKQNKAN
                     GVWKQWYADGNIKTEMVMVNDEPAKILTWDESGRLLSELSIRHHQRNGVVLEWYEDGS
                     KKSEAVYQDDKLVRKTQWDKDGYLIEP"
     gene            complement(4084..4983)
                     /gene="prmB"
                     /locus_tag="WHR07_001555"
     CDS             complement(4084..4983)
                     /gene="prmB"
                     /locus_tag="WHR07_001555"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEZ2130757.1"
                     /translation="MFNQAAQELTTIRDILRFAVSRFNEAGLFFGHGTDNAHDEAAYL
                     ILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAYLTHQAWQGEFDFYV
                     DERVIIPRSFIYELLGNGLRPWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAV
                     DVSLDALEVAGINVEDYGLEERIRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPE
                     EYLHEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHNRDVLEAAYPELPFT
                     WLETSGGDGFVFLLTREQLLGEE"
     gene            5128..5721
                     /locus_tag="WHR07_001556"
     CDS             5128..5721
                     /locus_tag="WHR07_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130758.1"
                     /translation="MADGMGNLIGWEKTGLVVGKQWITAKDDKVSDVCNANGEMGVIG
                     LYEPFSHGALTIPGHPNCRCEVVSVSGGELGEFAEKKELRKAAMQYARDNFIGKSYVN
                     ENSGHELKVTWQGVKHAASKANQAELSIMTKLDDLLRYAKYEGSYSDRKGHPNIIAAH
                     KYRAVAKVGNKSLNIGVIVREFPDDHKHYDHFILKDE"
     gene            5833..>6416
                     /locus_tag="WHR07_001557"
     CDS             5833..>6416
                     /locus_tag="WHR07_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 family phage prohead protease"
                     /protein_id="HEZ2130759.1"
                     /translation="MTKLYAEIAKMETQDDDTVKVWGYASSEEIDSDGEVIAAAAMKA
                     AIPDYMKFGAGREMHGSNAAGTAIEINVEDDGITFFGAHIIDPVVVSKVKTGVYKGFS
                     IGGSVTARDDLNKSQITGLKLTEISLVERPANPDAVSTCFKADKGAETVNNDTEHNAT
                     YFSHFPSKQKSTDGGRCPFLYRFPYFLSAGRAGFA"
BASE COUNT         1718 a         1620 c         1499 g         1579 t
ORIGIN      
        1 tttgggaaag cgattatatc aggaaaagca aaccgccttc ctacctgaaa actgctgctt
       61 cggcttgaag acacaagggt ctttaatatt ttaaaagcct tgccgttgga ttataattcc
      121 ctaattgatt tcttaatttt gctaataaac acttgtttgg taaggaatga atttatgcgt
      181 cctttgaacg tgcagatcag gttgggcaac cttaggcaca attatcagat tttaaaggaa
      241 atgcacggag gcaagctgtt ggcggtagtg aaggccgacg catacggaca cggtgcggtc
      301 agatgtgctt tcgcgctggc agacttggca gacggctttg ccgtggcgac aatcgatgaa
      361 ggaatcaggc tgcgggagag cggcattacc catccgattg tccttttgga aggcgtattt
      421 gaagcatcag agtacgaagc ggtcgaacaa tactcgcttt ggccggcagt cggaaaccaa
      481 tggcagcttg aggctttgct gatccgccat tggaaaaaac ccgtcaaagt ctggttgaaa
      541 atggattcgg ggatgcaccg taccggtttt ttccctcatg attacgcttc ggcatatgcg
      601 gcattgaaac agtcggaata tgtggacagt attgtcaaat tctcgcattt ctcctgtgcg
      661 gacgaacccg aaagcggtat gacggaaata cagatggaag cattcgattt gggtacggaa
      721 gggctggaag gcgaagaaag ccttgccaat tcggcggcta ttttgaatgt tcccgaagca
      781 cgcagggatt gggggcgcgc gggcttggcg ttatacggca tttccccgtt cggaggcagc
      841 gatgacaggc tgaaacccgt gatgaggctt tcaacccgta tttttggcga acgcgtttta
      901 cagccgcact cccctatcgg ttatggcgca acattttata ccagcaaatc tacgcgcgtc
      961 ggtctgattg cctgcggtta tgcggacggt tatccgcgcc gcgccccaag caattccccc
     1021 gtcgctgtcg acggcaaatt gacccgggtc atcggcaggg tctctatgga tatgatgacc
     1081 atcgagctgg acgcttcgca agaaggtttg ggacacgagg tcgaactgtg gggcgatacg
     1141 gtcaacatca atactgttgc cgaagcggcc ggaaccatcc cttacgaatt gatgtgcaat
     1201 atcaaacgtg caaaattcac ttatatcgag taatcaagtc caaacaaaaa tgccgtctga
     1261 agcctttcag acggcatttc cccatcaaaa ccgcaatcag tttttcatcg attgaaccgg
     1321 tgcgggaatc ctgccgcccc ggttgacgaa cacttcgcat gagccttctt ttaccggcat
     1381 tacaggcgcg tagcccaaca ggccgccgaa ctcgacgctg tcgccgacgg tttttccggt
     1441 taccggaata atgcgcacgg cagtggtttt gctgttgatc atgccgatgg cggcttcgtc
     1501 ggcgatgatg ccggaaatgg tgtgtgcggg cgtatcgcca gggacggcaa tcatgtccag
     1561 cccgaccgag cagacggcgg tcatcgcttc gagtttatcc aacgtcagca cgcctgcttc
     1621 ggcggcggca atcatacctt cgtcttcgga aacggggata aacgcgccac tcaaaccgcc
     1681 aaccgcgctc gaagccatca tgccgccctt tttcacggca tcgttcagca atgccaaagc
     1741 tgctgttgtg ccgtgcgtac cgcagacgct caaacccatt tcttcaagaa tgcgcgccac
     1801 cgagtcgccg acggcagggg tcggtgccag cgacaagtcg agaataccaa acgggatatt
     1861 cagcattttt gaggcttcgc ggccgatgag ttcgcccacg cgggtaattt tgaaggcggt
     1921 tttcttcaca acttcggcaa cttcggtcaa tgtcgttgca tccgaatttt ccaacgcggc
     1981 ttttacgaca cctgggccgg atacgccgac attaatcaca gcatccgctt cgcccgatcc
     2041 gtgaaacgca cccgccataa acggattgtc ttccaccgca ttgcagaaca cgacgatttt
     2101 cgcgcagccg aaaccttcgg gcgtaatttc agccgtgcgt ttgatggttt cgcctgccag
     2161 cttgaccgca tccatattga taccggcgcg cgtactgccg acattgatgg agctgcacac
     2221 gatgtcggtg gtcttcatcg cttcgggaat ggaacggatt aacacctcgt ctgaaggcga
     2281 catgcctttt tgcaccaacg cggaaaagcc gccgataaag gacacgccga tggctttggc
     2341 agccttatcc aaagtttgcg ccacgctgac gtaagaatcg gctttgctcg ccgccgcgat
     2401 ttgggcaatc ggcgtaacgg aaatgcgctg attcacaatc ggcacgccgt atttggcaga
     2461 cagatatttt gccgtcgcca ccaagtcttt gccgaccgtg gtgattttgt tgtaaatgtt
     2521 ttggtttaac acgtcgatgt cggtgctgat gcagtcgtgc aaatcaatgc cgatggtaat
     2581 ggtgcgcacg tcaaaattct ggtcggccac cattttgacg gtttctaaaa tctcgccgga
     2641 ttgaatactc atggctctcc ctccgactta aatacggtgc atggcttgga aaatttcttc
     2701 gttttgcata cggatatcaa gcgcgagttt tttgctctct tccgcaaaca aatccaaaac
     2761 ctcctgccga gatttggggc atttcgaggt atccaccaag ataatcatgg taaaaaaatc
     2821 gtccatcagc tgttggctga tattaaggat gttgattcgg ttttccgcca aaattttgga
     2881 aacatcgtac acgatgccga cgcggtcttt gccgatgacg gtgatgactg aattgttcac
     2941 aggcttactc cttgcagata tccgttaaag tccgaaatta taccaccgtt ggattttgaa
     3001 gaaatattgt caacaatata tacatacaaa atgccgtctg aaactatttc agacagcatc
     3061 aagattcagg gttcgattaa ataaccatcc ttatcccact gggttttcct gaccaacttg
     3121 tcatcctgat aaacagcctc gctcttttta gaaccatctt cataccactc caaaaccacc
     3181 ccgttgcgtt gatggtggcg gatagacagt tccgagagta atcggccgct ttcatcccaa
     3241 gtcagaattt tggcaggctc atcgttgacc ataaccattt ccgttttgat attgccgtcg
     3301 gcataccatt gcttccatac gccgtttgcc ttattctgtt taaactggat ttcgctttcc
     3361 ttgccgccgt tacggtaata gcggtacccc gtaccttcac tcaaaccatt tttataaggc
     3421 ataacggcag attttttacc gttcggatac cagttgaccc actccccgtc cggcttaccc
     3481 ttgctgaagc cccccgccat ttttttctga ccattaaaat gccacaaaat caacataccg
     3541 ttttgcaggg taggcacaaa agatttgatt tgcgttgaag caacgatata aggttcggaa
     3601 tatttcttca tcgacggata ataaaaatcc tgcgcgtgcg caataccctc cgccacacta
     3661 tattgcctga tataagcggc agaagacatc gtcgccgtca gtttcccgtt ctgattaaaa
     3721 taaacagaat aggtctgcgc cggcaaagcg gccgaaaaac ccaacaggac agttgaaaat
     3781 acaatccgag ataatttttt cattgcaata gcgatataaa aacaaggctg tgttttagta
     3841 atcttttgat ttcaattatt tgcaagggaa aagacaatta ttttccggtt aggaataaac
     3901 ctattctatt gaatatattg aagccaagta cgcctatcaa cactatatta aaacactgcc
     3961 aaaaacaatt aacttataaa caatatggta aggatttctc tgccaagcat caaacccgag
     4021 acaacgtatc gtaaaaatgc cgtctgaaaa caaatcgtct tcagacggca tttccccttc
     4081 aactcactct tcacccaata actgctcgcg cgtcaagagg aaaacaaaac cgtcgccccc
     4141 gctggtttcc aaccaagtaa aaggcaactc cggatacgct gcttccaata catccctgtt
     4201 atgcccgatt tccaccagca atacaccttt gggattcaga aactttgccg cattcagaag
     4261 aatctgcctg gtggcatcca acccgtccgc cccgctgccc aatgccaatt ccggttcgtg
     4321 caaatactct tcaggcaata actcaaccga ttccgcatcc acataaggcg gattggaaac
     4381 aatcaaatca taagtgcctt ccaatccttc aaacaaatcc gtatgaataa gccggatgcg
     4441 ttcttccaaa ccataatctt cgacattaat ccctgccact tccaaagcat ccaagctcac
     4501 atcaaccgca tcaatttggg catcaggata atgatgcgcc atctgaatgg caaggcaacc
     4561 gcttccggtg caaagatcca aagcattatg caccagctca tcgtattcta tccaaggacg
     4621 aagtccgtta cccaacaatt cataaataaa agaacgaggt atgattacgc gctcatccac
     4681 atagaaatca aactctccct gccatgcctg gtgtgtcaaa taagcggctg gaatgtgttc
     4741 gacagcacga cgctcaataa ccgccagcac ttcctctttt tcagcttcca agagttttgc
     4801 atcaagatat ggggcaagca tatccaaagg caaattcaaa gtatgcagaa tcaaataagc
     4861 cgcttcatca tgcgcattat ctgttccatg accaaaaaag agccctgcct cattaaaacg
     4921 gctgactgca aaacgtaaaa tatcgcggat agtcgtcaat tcttgtgctg cctgattaaa
     4981 cataatatga accattctgc gtatagatac ttttaattat aacagaaaca acaagcaaac
     5041 cttttcatat cgccaaataa ccacccaatc tacccataca actacataaa tgcccgcgcg
     5101 aaaaccatcg cccgaacgga aacgacaatg gccgacggta tgggcaatct gattggctgg
     5161 gaaaaaacgg ggcttgttgt cggtaagcag tggataaccg caaaagacga caaggtgtcc
     5221 gatgtctgca atgccaacgg cgagatgggc gtaatcgggc tttacgagcc tttctcacac
     5281 ggcgcattga cgatacccgg tcatccgaac tgccgatgcg aggttgtttc cgtatcgggt
     5341 ggcgaattgg gggaatttgc cgaaaaaaag gagcttcgta aagcggctat gcagtatgcg
     5401 cgggataact ttatcggcaa aagctatgtc aatgaaaaca gcgggcatga actgaaggta
     5461 acttggcaag gtgtgaaaca cgctgcgtca aaggcaaatc aggcggaatt atccatcatg
     5521 acaaaacttg atgacttatt gcgctacgca aaatatgagg gttcttattc ggataggaaa
     5581 ggtcatccta atattattgc agcacataag tatcgtgccg ttgccaaggt tgggaataag
     5641 tctttaaata tcggtgtgat tgtaagggaa tttccagacg accataaaca ttacgaccat
     5701 ttcatcttga aggatgaata aagccctttt gcagtgtcgt tctggagcgg atagcgttaa
     5761 ggcaagtaca cttccagcct tgaaaaaggg ctttaaattc agcatgccat ttatacaggc
     5821 aggagtaaac ccatgacaaa gttatacgca gaaatcgcca agatggagac gcaggacgac
     5881 gacacggtca aggtttgggg ttacgcttca agcgaggaaa tcgattcgga cggcgaagtc
     5941 atcgcggcgg cagctatgaa ggcggcgatt cccgattata tgaagtttgg cgcggggcgc
     6001 gagatgcacg gctcaaacgc tgcgggaacg gcaattgaaa tcaacgttga agacgacggc
     6061 ataacctttt tcggtgctca tatcatcgac cccgttgtcg tgtcgaaagt caaaacaggc
     6121 gtttacaaag gcttttccat cggcggcagc gttaccgccc gcgatgattt gaacaagtcg
     6181 caaatcacgg gcttgaagct gacggaaatc agccttgtcg agcgccctgc caatcccgat
     6241 gcggtgtcta cctgctttaa ggcggacaaa ggtgcggaaa cggtaaacaa cgatacagaa
     6301 cataatgcta catattttag ccatttccct tccaaacaaa aaagcaccga cggcggccga
     6361 tgccccttcc tttacaggtt cccctatttt ttatccgcgg gcagagccgg ttttgc
//
LOCUS       DAWGKF010000116         6346 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.116, whole genome shotgun sequence.
ACCESSION   DAWGKF010000116 DAWGKF010000000
VERSION     DAWGKF010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6346)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6346)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6346
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.116"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            47..1210
                     /locus_tag="WHR07_001558"
     CDS             47..1210
                     /locus_tag="WHR07_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEZ2130760.1"
                     /translation="MHINFSMEYKEFNENYLYKKPFIFKKALDVSSISWKEINELYQR
                     ADPTDWQFKFRKGEIIPKEAYVESFNDVGRIRHRFNKTAVYQYLQDGATMVYNRIDNE
                     PFVDSIAKQIAQFAQAQTVVSGYLAFGSSPSYRNHWDTRDVFAVQLIGKKHWTVSAPN
                     FDMPLYMQQAKDMPHITPPTTVDMEVILEAGDILYIPRGWWHNPMPMNCETFHLAIGT
                     FPPNGYNYMEWLMKKIPDIQSIRQNFIDWEHDQKNIDNAAQAVTEMMKNQENYQAFIQ
                     DFLGNQRVNTAFNMQIFGNLDNDRLPENSTIKLNSLDNRTIKQGYIIANGIKTNLDND
                     SQTILQWIADKHSVKLTQLYEFCQNQNINLEKVEKLVFDLTMIDVLECLTDER"
     gene            1217..1423
                     /locus_tag="WHR07_001559"
     CDS             1217..1423
                     /locus_tag="WHR07_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130761.1"
                     /translation="MFTFLNKNIFIKTIVLGCFYSFLFFSFFVSGKSFGYSFEIFNMD
                     TSALAFLSVYMGFFISVAVHIYDI"
     gene            1447..1782
                     /locus_tag="WHR07_001560"
     CDS             1447..1782
                     /locus_tag="WHR07_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin transporter"
                     /protein_id="HEZ2130762.1"
                     /translation="MKELTINDLTLVSGGFEVGRDYIEIAPVVGTAGGVASSVRAASM
                     TGEAGAILTRSGVTGLRAGVVAIPLLAYNGTVWLNRNTKLQDNLGRLIDKVTGLDQSG
                     NDYGDGTSY"
     gene            1817..3922
                     /locus_tag="WHR07_001561"
     CDS             1817..3922
                     /locus_tag="WHR07_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HEZ2130763.1"
                     /translation="MSIYLSRLSFGFSRRLLVVLQTEAAECGLACLVSVLGFHGFYTD
                     LRHLRARFSLSLKGATLADLVRFANSMNLTARAVRLDLDELVNLRLPCILHWDLNHFV
                     VLHEVHRNHIVIMNPASGWQKVRMEEVSRCFTGIALELFPNTQFEEKHETRKIRILPM
                     LRGVVGLKRSLFQLLLLAAVLQVFALASPFFMQWVIDHAIVSADRDLLLTLALGFGLL
                     MIVQQLVSLLQTWAGMYLSTSLNIQWKANVFRRLMDLPVSYFTKRHLGDVVSRFGSVD
                     SIQSTLTSTFFVLVLNSIMAVFTLGLMYLYSPSLTAVVLVVLLIYICIRWVAYYPLRH
                     ATEENIVHAAKQSSYFMETIRGIQTVKLFDKNAQRHAAWLNLFVDTINTGLTTQKLSA
                     MFGFANSLLFGIANILIVYFGAVSVLDGVFTVGALMALMAFMSYKSQFESKAGSLIDQ
                     FVQIKMLGLHAERLADIVLEKTENEQNNDFRLPKNLEHFDIKIENLSFRYAENEPYIL
                     QDFSLIIKQGTAIAFAGHSGCGKSTLIQILTGSLKPESGHVLLGENDIHAFPPAFIRK
                     WSASVMQDDVLFAGSIAENISFFDDTPNMEKIAFCAQMANIHHEIVAMPMAYETLIGD
                     MGSALSGGQKQRIVLARALYREPKILFLDEASSHLDINNERVINDNLRQLNITKIMVA
                     HRQETLNTADSVVYLDKVA"
     gene            3924..5186
                     /locus_tag="WHR07_001562"
     CDS             3924..5186
                     /locus_tag="WHR07_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEZ2130764.1"
                     /translation="MTLFRPEVFQAKKNRWTGQIVLVRPFSLQFLTFFAVSLAAILVA
                     FLIFGSYTNKTTVTGQLLPTTGVVRVYSQDMGVIAHQHVMNGDFVKKGDVLFTLSTSR
                     NDNNGSIQARLLAEAELKKSLSEQEIIMKKRVHAAEKTAQENTVHRFQNQMQHVRNQI
                     IMQEKRIAISEKMLEKQRYLAKMDAISELEKNSYEIALLELKAGLAAYQREADNLARE
                     ITVQQSNLKNLPEQQATEISQLERAVSVYQQEILDYQQRNEQTIRATISGYVSSINTE
                     IGQQVDTNKLLMSIVPKESELLANLYVPSRAIGFVKPNDKVILRYQAYPYQKFGHAEG
                     HVISIAQTALGAQEWTNLGNIFTQTAQVNEPVYLIKVKLDNQHIRIYGTEKKLQIGMI
                     LEADILHENKRLYEWILDPLYQVMGKIS"
     gene            complement(5456..6295)
                     /locus_tag="WHR07_001563"
     CDS             complement(5456..6295)
                     /locus_tag="WHR07_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130765.1"
                     /translation="MGNFAKVSNCEFWDKINYNRAAQAAEQRAKQAQETPKEPPKQEE
                     HFIAKLPNDKLMTIYRLFQKQLDDMRGLERDIERGDWYINARYRMNENRNKIRALEDD
                     NKRLHHDYWAVQDQGENRFFGMGKIGAKLVKENEKQQHINERHGANVREIRRLKTENE
                     KLEGQYSDKLAADVVKVRDRFNEELDNVRREIGKRPMEEFRNVFLQAAQEAQTTIGQK
                     AVQIELEKFPLNGSPSAKRIAFYFGAQRIREVEQKEREDQRKEQERQARRMERDDGHG
                     IGM"
BASE COUNT         1852 a         1168 c         1308 g         2018 t
ORIGIN      
        1 aagtaaactt aattttcatt attaataatg aaaataagga ttatttgtgc atattaactt
       61 ttcaatggaa tataaagaat ttaatgaaaa ttatttatat aaaaagccgt ttatttttaa
      121 aaaagcttta gacgtaagtt ctatctcatg gaaagaaatt aatgagttgt atcaacgtgc
      181 agaccctact gattggcaat ttaaatttcg caaaggggaa ataatcccca aagaagccta
      241 tgttgaatca ttcaatgatg tgggtagaat acgtcatcgg tttaataaaa cagccgtata
      301 tcagtatctg caagatggtg caacaatggt ttataaccgt attgataatg agccatttgt
      361 tgacagtatt gctaaacaaa ttgcccagtt tgctcaagca caaactgttg ttagtggtta
      421 tttggcgttt ggtagttctc catcatatcg taatcattgg gatactcgtg atgtgtttgc
      481 ggttcaattg attggcaaaa aacactggac agtttctgct ccaaattttg atatgccatt
      541 gtatatgcag caagcaaaag atatgccgca cattactccg cctacaacag tagatatgga
      601 agtcatttta gaagcaggag atattttata tatcccgcgt ggttggtggc ataatcctat
      661 gcctatgaat tgtgaaacat tccatttagc tattggaact tttccgccaa atggttataa
      721 ttatatggaa tggttgatga aaaaaatacc tgatatccag agtattcgtc aaaatttcat
      781 agactgggaa cacgaccaaa aaaatataga taatgcggct caggcagtta ctgaaatgat
      841 gaagaaccaa gaaaattatc aagcattcat acaagatttt ttgggaaatc aacgcgtaaa
      901 tactgcattt aatatgcaaa tttttggaaa tctggataat gacagattac ctgaaaatag
      961 tacaattaaa ctcaattcgt tggataaccg tacaattaaa caaggatata tcatagcgaa
     1021 tggcatcaaa accaacttgg acaatgatag ccaaacgatt ttgcaatgga ttgctgacaa
     1081 acatagtgtt aagttaactc aactgtatga attttgccaa aatcaaaaca ttaatttgga
     1141 aaaagtggaa aaattagtgt ttgatttgac aatgatcgat gtattggaat gtttaactga
     1201 tgaaagataa attattatgt ttactttttt aaataaaaat atatttatca aaacaattgt
     1261 acttggctgt ttttattcct ttttattttt tagttttttt gtatctggta agtcatttgg
     1321 ttattcattt gaaattttta atatggatac aagtgcgctt gcttttttaa gtgtatatat
     1381 gggctttttt ataagcgtgg ctgtgcatat ttacgatatt taatacaatt gaaaggataa
     1441 ataattatga aagaattaac tattaatgat ttaaccctag tttcgggtgg atttgaagtt
     1501 ggtcgtgatt atattgaaat agctccagtt gtaggtacag caggtggcgt tgcctcttct
     1561 gtgagagcag cttcaatgac tggagaagct ggagcaattc ttactcgttc aggagtaaca
     1621 ggattacgtg ctggagtggt agctattcca ttgttagcct acaatggtac tgtatggctt
     1681 aatagaaata ccaaattaca agataattta ggtagattaa tagataaagt aactggcctg
     1741 gatcaatcag gcaatgatta tggcgatggg acaagttatt aatctcataa tactttaaaa
     1801 tcaaaaaaga acaccaatgt caatatatct atctcgccta tcattcggct tttctcgccg
     1861 tttactagtt gtcttgcaaa cggaagcagc agaatgtgga ttggcgtgtt tggtatcggt
     1921 attggggttt catggttttt atacggattt gcgccattta agggcgcgtt tttctttgtc
     1981 tcttaaaggc gcaacattgg cagatttggt acggtttgct aatagcatga atttaactgc
     2041 tcgagctgtt cggttggatt tagatgaatt ggtaaatttg cgcttaccct gtattttaca
     2101 ttgggattta aatcattttg tggtgttgca tgaagttcat cgtaatcaca ttgtgattat
     2161 gaaccctgct tcgggttggc aaaaagtgcg tatggaagaa gtctcgcgct gttttacagg
     2221 catagcgttg gagctattcc ctaacacgca atttgaagag aaacacgaaa cgcgtaaaat
     2281 tcgcatacta ccgatgttgc gcggtgtggt tggattaaaa aggtctttat ttcagcttct
     2341 gctgctggcg gcagtattac aggtgtttgc tttggcaagc ccttttttta tgcaatgggt
     2401 aatagatcat gccattgtat cggcagaccg tgatttattg ctaacattgg cattgggttt
     2461 tggtttgttg atgattgtgc agcagttggt gtcattgttg caaacttggg caggtatgta
     2521 tttgtctact tcattgaata tccaatggaa agccaacgta ttccgccgct taatggattt
     2581 acctgtttct tatttcacta aacgacactt gggcgatgtg gtttcacgtt ttggctcggt
     2641 ggatagtatt caaagtacgc tcacttctac tttctttgtg ctggtactca acagcattat
     2701 ggcagtattt acattagggt taatgtattt atacagccct agtttaacgg ctgttgtatt
     2761 ggttgtttta ctgatttata tctgtattcg ttgggtggca tattatccgt tacgccatgc
     2821 aaccgaagaa aatattgttc atgctgccaa gcaaagcagt tatttcatgg aaaccatacg
     2881 cggtattcaa accgttaaat tatttgataa aaatgcacaa cgtcatgcgg cttggctgaa
     2941 cttatttgtt gatacaatca acacaggttt aacgacacaa aaactttccg caatgttcgg
     3001 ttttgcgaac agccttttgt ttggtatcgc taatatttta attgtgtatt ttggtgcggt
     3061 ttctgtgttg gacggtgttt ttaccgttgg ggcgttaatg gcgttaatgg cgtttatgtc
     3121 ctacaaaagt cagtttgaga gtaaagcagg ttcattgatt gaccagtttg tacaaatcaa
     3181 aatgctagga ttgcacgcgg aacgcttggc ggatattgtg ctagaaaaaa cggaaaacga
     3241 gcagaacaac gatttcaggc tgcctaaaaa tttagaacac tttgatatta aaatagaaaa
     3301 tctatcattt cgctatgctg aaaatgaacc atacattttg caagatttca gtttaattat
     3361 caaacaagga acagccattg cttttgctgg acattcaggc tgtgggaaat ctacgctcat
     3421 tcaaattctg acaggcagtc tgaaacctga aagcggtcac gtgttactag gcgagaatga
     3481 tattcatgcg tttccacctg catttatccg caaatggagc gcaagtgtaa tgcaagatga
     3541 tgtgttattt gctggctcaa tcgcagaaaa catcagtttt tttgatgata cgcccaatat
     3601 ggaaaaaatc gcattttgcg ctcaaatggc gaatattcat catgaaattg tcgctatgcc
     3661 tatggcgtat gaaaccttaa ttggtgacat gggaagcgca ttgagcggtg ggcaaaagca
     3721 gcgtattgtt ctagctcgtg ctttatatcg tgaacccaaa attttgtttt tagacgaagc
     3781 cagtagccat ttggacatca acaatgaacg tgtgattaac gataatctac gccaactcaa
     3841 cattaccaaa atcatggtcg cgcatcgtca ggaaacttta aatactgctg atagcgtagt
     3901 ttatttagac aaggtagcct gaaatgacat tatttcgccc cgaagtattc caagctaaaa
     3961 aaaatcgctg gacagggcaa attgttttag tgcgtccttt ttccttgcag tttttaacat
     4021 ttttcgcggt ctcattagcg gctattttag ttgctttttt aatttttggg agctatacca
     4081 ataaaaccac cgtaacagga caacttttgc cgacaacagg ggtagtacgc gtatattcgc
     4141 aggatatggg ggttattgct catcaacacg ttatgaatgg cgattttgtg aaaaaaggcg
     4201 atgtgttatt tacattatct acttcacgaa atgacaataa tggcagcata caagcacgat
     4261 tactcgccga agctgaatta aaaaaatcac tatcagaaca agaaattatt atgaaaaaac
     4321 gtgttcatgc agcagaaaaa accgcacaag aaaacacggt acaccgtttt cagaaccaaa
     4381 tgcaacacgt tagaaatcaa attatcatgc aagaaaaacg tattgcgatt tctgaaaaaa
     4441 tgttagaaaa acagcgttat ttagccaaaa tggacgcaat ttctgaatta gaaaaaaata
     4501 gttatgaaat tgctttattg gagctgaaag caggtttagc cgcttaccaa cgagaagcag
     4561 ataatcttgc tcgggaaata actgtacagc aaagcaatct aaaaaatctg cctgaacagc
     4621 aagctactga aatcagtcaa ttagaacgcg cagtatctgt ctatcaacaa gaaatattgg
     4681 attatcaaca acgtaacgaa caaactattc gcgcaaccat atcaggctat gtcagttcta
     4741 ttaacacgga aattggtcag caggtagata ctaacaaact attgatgagt atcgtgccga
     4801 aagaaagtga attactggct aatttatatg tccctagtcg cgcaatcggt tttgtaaaac
     4861 caaatgacaa ggtaattttg cgttatcaag catatcctta tcaaaaattc ggacacgcag
     4921 aaggacacgt catttctatt gctcaaacgg cactaggggc gcaagaatgg acaaatttag
     4981 gcaatatttt tactcaaaca gcacaagtga atgagcctgt ttatttaatc aaagtaaaac
     5041 tggataatca gcatattcgt atatatggca cggagaagaa attgcaaatt ggtatgatac
     5101 tagaagccga tattttgcat gagaataaac ggttatatga atggatactt gaccctttgt
     5161 atcaagtaat gggaaaaata tcatagctga attgctcaat acattggagc gtatgagtgc
     5221 ccctaattat caagcaaaac caatgtccga tgacttccaa tttgttgtta agcacaaata
     5281 cacagtgttt tatgtaataa tgaagacaga gaagtgatac aatttttcgc tccatttttg
     5341 cttcctgaat tgctgcaatt gtatctgcgt tgtatgcgag aagtaaatat tttcgatgca
     5401 tttgctgact ttgtaccata atacgtcttc caaccagtat gataggctgg tttttctaca
     5461 tgccgatgcc gtggccgtcg tcccgctcca tacgccgcgc ctgccgctcc tgctctttgc
     5521 gctggtcttc ccgctccttc tgctctactt cccttatccg ctgcgcgccg aaataaaacg
     5581 cgattcgctt ggccgaaggg ctgccgttca gggggaattt ttccagttcg atttgaaccg
     5641 ccttctgccc tattgtcgtc tgtgcttctt gggctgcctg caaaaatacg ttcctgaatt
     5701 cttccatcgg ccgtttgccg atttccctgc ggacattgtc cagttcttcg ttaaacctgt
     5761 cgcgtacttt gaccacgtcg gcggccaact tgtcgctata ctgcccttcc agtttttcgt
     5821 tttctgtttt cagccgccgg atttctcgca cgttcgctcc atgccgttcg ttgatgtgtt
     5881 gctgcttctc gttttcctta accagttttg cgccgatttt acccatgccg aaaaagcggt
     5941 tttcgccttg gtcttggact gcccaatagt cgtgatgcag ccgtttgttg tcgtcttcca
     6001 gcgcccttat tttgtttcgg ttttcgttca tgcggtatcg cgcattgatg taccaatctc
     6061 cgcgttctat atcgcgctcc aagccgcgca tgtcgtccag ttgtttttga aacagcctgt
     6121 atatcgtcat tagcttgtcg ttcggcagct tggcgataaa gtgctcttcc tgtttcggcg
     6181 gctctttcgg tgtttcctgc gcctgctttg cccgctgctc ggcggcttgg gcagcccgat
     6241 tataattaat tttatcccag aattcacaat ttgagacctt tgcaaaattc cccaaaatcc
     6301 cctaaattcc caccaagaca tttaggggat ttctcatgag cacctt
//
LOCUS       DAWGKF010000117         6202 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.117, whole genome shotgun sequence.
ACCESSION   DAWGKF010000117 DAWGKF010000000
VERSION     DAWGKF010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6202)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6202)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6202
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.117"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            272..718
                     /gene="yciA"
                     /locus_tag="WHR07_001564"
     CDS             272..718
                     /gene="yciA"
                     /locus_tag="WHR07_001564"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HEZ2130766.1"
                     /translation="MQHEEGNRQRPQGELLLRTVAMPRDTNPNQDIFGGWIMSQMDLG
                     GGILAAEIAWGRIVTVAVQEMNFIRPVKVGNVVCCYGHCVRVGNTSLQLKVEVWVKTL
                     MNDCVTEDRHLVTEAVFTYVAIDAEGNPRPIPKEGNPKLAGLLPTP"
     gene            complement(769..1590)
                     /locus_tag="WHR07_001565"
     CDS             complement(769..1590)
                     /locus_tag="WHR07_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEZ2130767.1"
                     /translation="MAVLITGASAGFGEAMCRAFVGAGYRVIGAARRADRLQALADEL
                     GALFYPLEMDVSRRESVENALNGIPDEFSDIDCLINNAGLALGLDTADKADFGDWETM
                     IQTNVLGLTFLTRKILPQMVERGGGYVMNLGSIAGNYAYAGSNVYGATKAFVRQFSLN
                     LRAELADKNIRVTNIEPGLCGNTEFSNVRFKGDDEKAAGVYEGVEFIRPEDIAETALW
                     LYRRPAHMNVNTIEIMPVAQTFAGMKVIKKAVPEVREDFEKQSMSLFSRIRSWFK"
     gene            1709..2167
                     /locus_tag="WHR07_001566"
     CDS             1709..2167
                     /locus_tag="WHR07_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEZ2130768.1"
                     /translation="MKTQISLAAAAITLLLSACGGSGIPSQPKGEISENRTAAFKSMM
                     PDFSRMGKMVKGEEPYDVEKFKQAAAAFAESSKKPFTLFESDPQGNGRALPAVWSDGA
                     KFEAEKTKFAAAVEKLNAAAQTGKLDEIKAAYGETGASCKSCHDSFRAPE"
     gene            complement(2310..3446)
                     /gene="lst"
                     /locus_tag="WHR07_001567"
     CDS             complement(2310..3446)
                     /gene="lst"
                     /locus_tag="WHR07_001567"
                     /EC_number="2.4.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyllactosaminide
                     alpha-2,3-sialyltransferase"
                     /protein_id="HEZ2130769.1"
                     /translation="MGLKKACLTVLCLIVFCFGIFYTFDRVNHGERNAVSLLKDKLFN
                     EEGEPVNLIFCYTILQMKVAERIMAQHPGERFYVVLMSENRNEKYDYYFNQIKDKAER
                     AYFFYLPYGLNKSFNFIPTMAELKVKAMLLPKVKRIYLASLEKVSIAAFLSTYPDAEI
                     KTFDDGTGNLIQSSSYLGDEFSVNGTIKRNFARMMIGDWSIAKTRNASDEHYTIFKGL
                     KNIMDDGRRKMTYLPLFDASELKAGDETGGTVRILLGSPDKEMKEISEKAAKDFNIQY
                     VAPHPRQTYGLSGVTTLNSPYVIEDYILREIKKNPHTRYEIYTFFSGAALTMKDFPNV
                     HVYALKPASLPEDYWLKPVYALFTQSGIPILTFDDKNQSYGKSK"
     gene            3547..3651
                     /locus_tag="WHR07_001568"
                     /pseudo
     CDS             3547..3651
                     /locus_tag="WHR07_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(3649..3819)
                     /locus_tag="WHR07_001569"
     CDS             complement(3649..3819)
                     /locus_tag="WHR07_001569"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130770.1"
                     /translation="MAIMAYFGGFVRALFDLGVFERGGVKGRGKWFSRVWRRSEVLCL
                     MCGGIFSVKLIL"
     gene            3879..6104
                     /locus_tag="WHR07_001570"
     CDS             3879..6104
                     /locus_tag="WHR07_001570"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HEZ2130771.1"
                     /translation="MTQKSTIVYTHTDEAPALATQSLLPIVQAFARHADIDVKTSDIS
                     LSGRILAAFPEYLTEAQRVPDALAELGELVKQPDANVIKLPNISASVPQLTAAIKELQ
                     SKGFAVPDYPADPQTDEEKAVRERYDRIKGSAVNPVLREGNSDRRAPKAVKNFAKKNP
                     HSMGAWTKDSKTHVATMQSGDFFHNEQSVIVPEATSVSIVFTDKQGNKKELREPVALK
                     AGEIIDATVMSKKALLAFLAEQVKDAKAKGVLFSLHMKATMMKVSDPIIFGHAVKVFF
                     APVFEKFGDKLAAAGVNVNNGFGNLLANLDKLDADTRTAVEAEIAAVYAANPDLAMVD
                     SDKGITNLHVPSDVIVDASMPAMIRNSGRMWDKNGKAQDTKAVIPDSSYAGVYQATID
                     FCREHGAFDPTTMGTVPNVGLMAQAAEEYGSHNKTFEIEADGQVQVIDAEGKVLMQHD
                     VEAGDIWRMCQTKDAPVKDWVQLAVNRARLSNTPAVFWLDENRPHDKSLLAKVKAYLA
                     ELDTNGLDIRVLAPEEAAKFSLGRLKNGEDTISVTGNVLRDYLTDLFPILELGTSAKM
                     LSIVPLMNGGGMFETGAGGSAPKHVQQFLEENHLRWDSLGEFLALAVSFEHLAQKTGN
                     AKAQVLADTLDAATEKLLLNGKSPKRKAGELDNRGSHFYLTLYWAQELAEQDKDAELK
                     AAFTPLAAALTADEAKIVAELSAVQGKAVDIGGYYAANPEKAAQVMRPSVTFNQALNA
                     L"
BASE COUNT         1656 a         1814 c         1388 g         1344 t
ORIGIN      
        1 tgacgcggcg ggaatctatc ggaaatgact gaacccccga gattctagat tcccactttc
       61 gtgggaatga cggttcagtt gcttagggta ggatttggcg ggattggcgg actgaagccc
      121 actctacagc cccgccctac aatacgcctt gcgaatctgt cccacgcccg cccttgtatg
      181 tctcaaatgg gttaaactac gcacttcccg acttcccgtt tcgggcaggg gtgcaggttc
      241 gatttatctt tcaataaaac aaggaaactt tatgcagcac gaagaaggca accgccaacg
      301 ccctcaaggc gaactgctcc tgcgtaccgt cgctatgccg cgcgatacca atcccaacca
      361 agacattttc ggcggctgga ttatgtcgca gatggatttg ggcggcggca tattggcggc
      421 ggaaatcgcg tggggacgca tcgttaccgt cgccgttcag gaaatgaact tcatccgtcc
      481 ggtcaaggtc ggcaacgtcg tctgctgcta cgggcattgc gtccgcgtgg gcaatacttc
      541 cctccagctt aaagtcgaag tctgggtgaa aactttgatg aacgattgcg ttaccgaaga
      601 ccgccacctc gtaaccgaag ccgtgttcac ttatgtcgcc atcgatgcgg aaggcaatcc
      661 gcgcccgatt ccgaaagaag gcaaccccaa attggcgggc ttattgccta ctccgtaaaa
      721 atacccgtaa aaatgccgtc tgaaactgtc ttcagacggc attccgcatc atttgaacca
      781 agatctgatg cgggaaaaca gcgacatact ctgtttttca aagtcttccc gcacttccgg
      841 cacggctttt tttatcactt tcattcctgc aaaagtctgc gccacgggca taatttcaat
      901 cgtgttcaca ttcatatgcg ccggccggcg gtacagccac aatgcggttt ccgcaatatc
      961 ttcggggcgg ataaattcca caccctcata cacgcctgct gccttctcgt catcgccttt
     1021 gaagcgcacg ttggaaaact ccgtattgcc gcacaaaccc ggctcgatat tggtaacgcg
     1081 gatgttctta tccgccaact ccgcgcgcaa attcaggctg aactggcgca caaacgcctt
     1141 ggtcgccccg taaacgttgc tgccggcata agcataatta cccgcaatcg aacccaaatt
     1201 catcacatag ccgccgccac gttccaccat ttgcggcaaa atcttgcgcg tcaggaacgt
     1261 caaacccaaa acattggttt gaatcattgt ttcccaatct ccaaaatccg ccttgtccgc
     1321 cgtgtccaaa cccaaagcca gcccggcatt gttgatgagg cagtcgatgt cggaaaattc
     1381 atcggggatg ccgtttaagg cgttttccac cgattcgcgg cgcgacacgt ccatttccaa
     1441 agggtaaaac aaagcaccca attcatccgc caaggcctga agcctgtccg cgcggcgcgc
     1501 cgcaccgata acgcggtatc ccgccccgac aaacgcgcgg cacatcgctt cgccgaatcc
     1561 tgccgaagca ccggtaatta aaacagccat tgtttttcct ttctttctcg tttcccaaac
     1621 ctgtttcagg tatcataacg ctcttcagac ggcatcgcgc cggctgaaaa tgacaacaac
     1681 cataccacca cgacaggaca cattcaatat gaaaacccaa atcagccttg ctgctgccgc
     1741 catcacactg ctcctttccg cctgcggagg cagcggaata ccttcccaac ccaaaggcga
     1801 aatttccgaa aaccgcaccg ccgcgttcaa atctatgatg cccgacttct cgcgtatggg
     1861 caaaatggtc aaaggcgaag aaccttacga tgtcgaaaaa ttcaaacagg ctgccgcggc
     1921 gtttgccgaa agcagcaaga aaccgttcac actttttgag tccgatccgc aaggcaacgg
     1981 ccgcgccctg cccgccgttt ggtcggatgg tgcaaaattt gaagccgaaa aaacaaaatt
     2041 cgccgccgcc gtcgaaaaac tcaacgccgc cgcccaaacc ggcaaactgg acgaaatcaa
     2101 agccgcctac ggcgaaaccg gcgcaagctg caaatcctgc cacgacagtt tccgcgcgcc
     2161 ggaataacat ccgaaacaaa acaatgccgt ctgaagcctt cagacggcat tttctttgcc
     2221 atttcagcac acgcaaagca atcaaaaatt atcgtcaatc caaaaaatac gccatatcct
     2281 gatttttgcc ttacttactc cgccattctc tattttgatt taccatacga ttgattttta
     2341 tcgtcaaatg tcaaaatcgg gatgccggat tgggtaaaca gggcatacac tggcttgagc
     2401 caataatctt ctggaaggga agccggtttc aatgcgtaaa cgtgcacatt gggaaaatcc
     2461 ttcatcgtca acgccgcgcc gctgaaaaag gtataaattt catacctcgt atgcgggttt
     2521 ttcttaatct cgcgcaaaat atagtcttcg atgacatagg gcgaatttaa tgtggttacg
     2581 ccggaaagcc cgtaggtttg gcgggggtgc ggcgcgacat attgtatgtt gaaatctttt
     2641 gccgcctttt ccgaaatttc cttcatttct ttgtcgggcg aacccaaaag tatccgcacc
     2701 gtgccgcccg tttcatcccc cgccttcaat tcggacgcat cgaacagcgg caagtaagtc
     2761 atcttgcggc ggccgtcgtc cataatgttt ttcaaaccct tgaatatcgt gtaatgctcg
     2821 tcggaagcgt tacgggtttt ggcgatgctc caatctccga tcatcattcg ggcaaaattc
     2881 cgcttgatcg tcccgtttac agaaaactca tcgcccaaat agctgctgct ttgaattaaa
     2941 ttgcctgtcc cgtcgtcaaa ggttttgatt tccgcatccg ggtaagtgct caaaaaggcg
     3001 gcaatgctaa ctttttccaa acttgccaaa taaatccgct tgaccttcgg cagcagcatt
     3061 gccttcacct tcagctccgc catcgtcgga atgaaattaa acgatttgtt caaaccgtag
     3121 ggcaggtaga aaaaatacgc ccgctccgcc ttatccttta tctgattgaa ataataatcg
     3181 tatttttcat tcctgttttc agacatcagc accacataaa accgctcccc cggatgctgc
     3241 gccataatcc tttccgccac cttcatctgc aatatggtat agcagaaaat cagattgacc
     3301 ggttccccct cttcattgaa gagtttgtcc ttcagcaggg aaaccgcatt cctttcccca
     3361 tgatttaccc ggtcaaatgt ataaaatatc ccgaaacaaa aaacaatcaa acacaacacg
     3421 gtcaaacaag cctttttcaa gcccatatcc ctaaaactcc attccgacaa attgaacata
     3481 cgccccgagt gtcccgggac ggaaaaatgc ggaattttag cagatattcc gacagttacc
     3541 gaatattata gtggattaaa tttaaatcag gacaaggcga cgaagccgca gacagtacaa
     3601 gcagtacgac aaggcgaggc aacgctgtac tggtttaaat ttaaaccact ataaaatcaa
     3661 tttcaccgaa aatatgccgc cgcacatcag gcacagcacc tccgaccgcc gccaaacgcg
     3721 ggaaaaccat ttcccccttc ctttcacgcc gccgcgttca aacacgccaa gatcgaacaa
     3781 agcgcgaaca aagccgccaa aatatgccat aatagccacg cacattcccc gcgcaatgtg
     3841 ttccaaaaga aaaaaccaac ctacaagaga ataatcctat gactcaaaaa tccaccattg
     3901 tttataccca taccgacgaa gcacccgcgc tggcgaccca atcgctgctg ccgattgtgc
     3961 aggcttttgc ccgccacgcc gatattgatg tcaaaaccag cgacatttct ctctccggcc
     4021 gtattttggc ggcgtttccc gaatacctga ccgaagcgca acgcgtacct gatgcgcttg
     4081 ccgaattggg cgaactggtg aaacaacccg atgcaaacgt aatcaaactg ccgaacatca
     4141 gcgcgtccgt accgcaactg actgccgcga ttaaagaatt gcaatctaaa ggctttgccg
     4201 ttcccgacta tcccgccgac ccgcaaaccg atgaagaaaa agccgtacgc gaacgctacg
     4261 accgcatcaa aggcagcgcg gtaaaccctg tcctgcgtga aggcaactcc gaccgtcgcg
     4321 cccctaaagc agtgaaaaac tttgcgaaaa aaaatccgca cagcatgggc gcatggacca
     4381 aagactccaa aacccacgtt gccaccatgc aaagcggcga cttttttcat aacgaacaat
     4441 ctgttatcgt acctgaagcg acttccgtat ccatcgtatt caccgacaaa caaggcaaca
     4501 aaaaagagct gcgcgagccc gtcgccctga aagccggcga aatcatcgac gcgaccgtga
     4561 tgagtaaaaa agccctgctc gccttccttg ccgaacaagt aaaagatgcg aaagcaaaag
     4621 gcgtgttgtt ctcgctgcac atgaaagcca ctatgatgaa agtgtccgac ccgattatct
     4681 tcggacacgc cgtcaaagta ttcttcgcgc ctgtttttga aaaattcggc gacaaactgg
     4741 ctgccgcagg tgtcaacgtc aacaacggct tcggcaacct gcttgccaat ctggacaaac
     4801 tggatgcgga cacccgcacc gccgtcgaag ccgaaatcgc cgccgtttac gctgccaacc
     4861 ccgatttggc gatggttgat tccgacaaag gcatcaccaa cctgcacgtt cccagcgatg
     4921 tcatcgtcga tgcctctatg cctgcgatga ttcgcaattc cggccgtatg tgggacaaaa
     4981 acggcaaagc gcaagacacc aaagccgtga ttcccgacag cagctatgcc ggcgtttacc
     5041 aagcaaccat cgacttctgc cgcgaacacg gcgcatttga cccgacaacc atgggtactg
     5101 tgcccaacgt cggactgatg gcgcaagcgg cggaagaata cggctcgcac aacaaaacct
     5161 ttgaaatcga agccgacggt caggttcaag tcattgatgc ggaaggaaaa gtcctgatgc
     5221 agcacgacgt tgaagcaggc gacatctggc gtatgtgcca aaccaaagac gctccggtca
     5281 aagactgggt gcaactcgcc gtcaaccgcg cccgcctgag caacacgcct gccgtgttct
     5341 ggctcgatga aaaccgtccg cacgacaaga gcctgctcgc caaggttaaa gcctaccttg
     5401 ccgaactgga taccaatggc ctcgacatcc gcgtcctcgc tcctgaagaa gccgccaagt
     5461 tcagcttggg tcgtctgaaa aacggcgaag acaccatctc cgtaaccggt aatgtcttgc
     5521 gcgactacct gaccgacttg ttcccaattt tggaactcgg cacaagcgcg aaaatgctgt
     5581 ctatcgttcc attaatgaac ggcggcggta tgtttgaaac cggcgcgggc ggttctgcac
     5641 cgaaacacgt tcaacagttc ctcgaagaaa accacctgcg ttgggactct ttgggcgaat
     5701 tcctcgcact cgccgtatcg tttgaacatt tggcgcaaaa aaccggcaat gccaaagccc
     5761 aagtcctcgc tgacactttg gatgccgcca ccgaaaaact gctgttgaac ggcaaatcgc
     5821 ctaaacgtaa agccggcgaa ctcgacaacc ggggcagcca tttctacctt accctctact
     5881 gggcgcaaga attggcggag caagacaaag atgccgaact gaaagccgca tttacgccat
     5941 tggcagccgc tttgaccgcc gacgaagcga aaatcgttgc cgagctttcc gccgtacaag
     6001 gcaaagcggt cgacatcggc ggctactacg cagccaatcc tgaaaaagcg gcacaagtga
     6061 tgcgtccgag cgtaaccttt aatcaggcac taaacgcctt ataagcacaa aggtaaaaat
     6121 gccgtctgaa cattcgtcgt tcagacggca ttagttatcc ctatctgcct gattatgatt
     6181 aaacgccgca cccattggat at
//
LOCUS       DAWGKF010000118         6158 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.118, whole genome shotgun sequence.
ACCESSION   DAWGKF010000118 DAWGKF010000000
VERSION     DAWGKF010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6158)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6158)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6158
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.118"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(294..728)
                     /locus_tag="WHR07_001571"
     CDS             complement(294..728)
                     /locus_tag="WHR07_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEZ2130772.1"
                     /translation="MAFGSMNSGDDSPMSDINVTPLVDVMLVLLIVFMITMPVLTHSI
                     PLELPTASEQTNKQDKQPKDPLRLTIDANGGYYVGGDSASKVEIGEVESRLKAAKEQN
                     ENVIVAIAADKAVEYDYVNKALEAARQAGITKIGFVTETKAQ"
     gene            complement(731..1393)
                     /gene="exbB"
                     /locus_tag="WHR07_001572"
     CDS             complement(731..1393)
                     /gene="exbB"
                     /locus_tag="WHR07_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HEZ2130773.1"
                     /translation="MNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARK
                     GNAAVKRHMRDTLSLNDAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLN
                     EYLVIQIRNSMAQIMRRFDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMS
                     IAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQK
                     DS"
     gene            complement(1459..2295)
                     /locus_tag="WHR07_001573"
     CDS             complement(1459..2295)
                     /locus_tag="WHR07_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEZ2130774.1"
                     /translation="MDKERILTPAVVFSVALLHLAMVALLWQAHKLPVIESGNVIEFV
                     DLGDFGGGDGAPEGAGAPAAPEPQPEPEPPKPVEPPKPVLKPVVTKKADADIQQPKEE
                     PKPEEKPKPEEKPKPEPKPEAKPVPKPAEKPVEKPSEKPAEHPSNASAKADSEQGNGE
                     ETGTKGDGTGRGEGSGKGSGGVKGEHGEGAGSSKGNPLRANGSIPRPAYPTLSMENDE
                     QGTVVLSVLVSPGGHVESVKIVKSSGFSRLDNAARKAAQNGHFQANAWTEFKVPVKFE
                     LN"
     gene            2550..3188
                     /locus_tag="WHR07_001574"
     CDS             2550..3188
                     /locus_tag="WHR07_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEZ2130775.1"
                     /translation="MFQNFDLGVFLLAVLPVLLAITVREVARGYTARYWGDNTAEQYG
                     RLTLNPLPHIDLVGTIIVPLLTLMFTPFLFGWARPIPIDSRNFRNPRLAWRCVAASGP
                     LSNLAMAVLWGVVLVLTPYVGGAYQMPLAQMANYGILINAILFALNIIPILPWDGGIF
                     IDTFLSAKYSQAFRKIEPYGTWIILLLMLTGVLGAFIAPIVRLVIAFVQMFV"
     gene            complement(3640..4440)
                     /locus_tag="WHR07_001575"
     CDS             complement(3640..4440)
                     /locus_tag="WHR07_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEZ2130776.1"
                     /translation="MKKTIFNITKMDCPSEEQLIRMRLKDVSDIYELQFDIAGRCLTV
                     YHDNQDTTILQVLEPLNFDSHIISTEVIVDKIVFNKPDEHLEKRLLYQVLMINFVFFI
                     IECSVGIFANSMGLIADSLDMLADSFVYILALSAIGMTLAYKKRVAFLAGITQIILAL
                     FGVIEVIRRFIGAEQLPNYQLMIGTAFLALIANWLCLYLLSKNQNKEIHIKASMIFTS
                     NDIIINIGVIAAGALTLLTHSSYPDLIIGMIVFVIVLFGARNILKLAK"
     gene            complement(5419..6060)
                     /locus_tag="WHR07_001576"
     CDS             complement(5419..6060)
                     /locus_tag="WHR07_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GrxB family glutaredoxin"
                     /protein_id="HEZ2130777.1"
                     /translation="MKLYIYDHCPFCVRARMAAGLFGADVEEAVLANDDEATPIGMIG
                     AKQVPVLQKEDGSFMGESLDIVRHFDREDRLKDEVRPEIRAWLDKVGGYNDKLVQPRV
                     IKIGLPEFATPEAVKYFTDKKEKSIGSFSANLNKTAQYLERINADLQELENLMDGASD
                     GINGGIGMEDILVFPVLRNLTVVRGIEWPQKVMGYLMMMSEKSGVPLYFDRAL"
BASE COUNT         1646 a         1542 c         1265 g         1705 t
ORIGIN      
        1 gtactatttg tactgtctac ggcttcgttg ccttgtcctg atttttgtta atccactata
       61 aaaattagaa atgcacattt tcattattct cgcgcaggca ggactccaga cttacccatt
      121 tcagtaatgt ttgaaaataa aagaaaaatc agatgtttgt attcccgtct gcgcagaaat
      181 ggagacggcg ctctgtcgtc tcatttttgt tttaatcaac tatatatagc tgattaaaca
      241 taagaaatgc cgtctgaaag actttcagac ggcattcgtt caagcgtcga actttattgc
      301 gccttggttt cggttacaaa accgattttg gtgattcctg cctgacgggc ggcttctaaa
      361 gctttgttta cataatcgta ttccaccgcc ttgtctgccg caatcgccac aatcacgttt
      421 tcattctgct ccttggcggc tttcagacgg ctttccactt ccccgatttc cactttgctt
      481 gcagaatccc cgccgacata atagccgccg ttcgcatcaa tcgtcaggcg cagggggtct
      541 ttaggctgtt tgtcctgctt gtttgtctgc tcggacgcgg tcggcagttc caaagggatg
      601 gaatgcgtca gcaccggcat agtaatcata aacacaatca gcaacaccag catcacgtcc
      661 accaacggcg taacgttgat gtcggacatc ggagaatcgt cgccggaatt catcgaacca
      721 aatgccataa tcagctatcc ttttgattaa gcaggcggac gtgcaaatcg tgcgccatcg
      781 catccaaatc ctgggtcagt atttttgtgc cgcgattgag gaagttgtat gccaacaccg
      841 ccggaatcgc cacgaacaaa cccgccgccg tcgccaccag tgcctcgcca atcgggccgg
      901 caaccgccgc aatactcatc tgcccgcttt gcccgatatt gatcagggcg tggtaaatcc
      961 cccaaaccgt gccgaacagc ccgataaacg gcgcggtcgc gccgatggag gcaagcgcgg
     1021 tcatcccgta atcaaaccgg cgcataatct gcgccatact gttgcggatt tgaatgacca
     1081 aatactcgtt caacggcaaa gcctgcgcca gttcggacgc ttcgtttcgg cggtagttgc
     1141 ggtaagactg caatgcctct tgcgccagtt tggacaaagg cgcatcgacg gcgcgcactt
     1201 tttcgaccgc gtcgttcagc gacaaagtat cgcgcatatg ccgtttgacg gcggcattcc
     1261 ctttgcgcgc ccgatacagc ttgatgcagc gcaagacaac caaacaccac gttacgatac
     1321 tcatcaacag catcaacaca aacacaccga tcaggacggg atcgcccgat tcaaatacta
     1381 atttcaaatt cataatgatt ccaacactga aaaaaccaat caaacatcca agctgccgca
     1441 aaccgctgcg gcaaccgcct aattcaattc aaacttgacg gggactttaa actccgtcca
     1501 ggcattggct tgaaaatgcc cgttttgcgc cgccttgcgt gccgcattgt ccaaccgaga
     1561 aaaaccactg cttttcacga ttttaacgga ctcgacatga ccgcccggag aaaccaaaac
     1621 gctcaaaaca accgtaccct gctcgtcatt ctccatagaa agcgtgggat aagccgggcg
     1681 cggaatgctg ccgttggcgc gtaaaggatt gcctttgctg ctgccggctc cttccccgtg
     1741 ttcgcctttg acaccgccgc tacctttacc gctgccttct ccgcgccccg ttccgtctcc
     1801 tttggtaccg gtttcttccc cattaccctg ctcgctgtct gctttggcag aagcattgct
     1861 gggatgttcg gcaggttttt cagacggctt ctcgaccggt ttttccgccg gtttcgggac
     1921 aggcttcgct tccggcttag gctctggttt cggtttttct tcgggtttcg gcttttcttc
     1981 aggtttcggc tcttccttag gctgctgaat atccgcatcc gcctttttcg taaccaccgg
     2041 cttcaaaacc ggcttgggcg gctcgacagg tttgggcggc tcaggctcag gttgcggctc
     2101 aggcgcagca ggcgcacctg cgccttcggg tgcaccgtcc cctccgccaa aatcacccaa
     2161 atcgacaaat tcgataacat ttcctgactc tatcacgggc agcttgtgcg cctgccagag
     2221 caatgccacc attgccaaat gcagcagtgc gacggaaaac acgactgcgg gggttaaaat
     2281 tcgttcttta tccataattc gggcataata atagcaacaa ttcctatttg caacctattt
     2341 ttacaatttt tggtcatatg aatgtctgtt ccgttcacag gcaaaccgtg tttaaacgct
     2401 gtattacagc aaatcatcag ataacgggcc ggcagaaaaa atgattccgt ctgatttctt
     2461 attccaataa aatcaggtta gatgatatat tgccgcttct gtctgtcagc cgtttcgggc
     2521 tgcacaccac atctgttcaa aggaaaacca tgtttcaaaa ttttgatttg ggcgtgtttc
     2581 tgcttgccgt cctgcccgtg ctgctcgcca ttaccgtcag ggaggtggcg cgcggctata
     2641 cggcgcgcta ctggggagac aacactgccg aacaatacgg caggctgaca ctgaaccccc
     2701 tgccccatat cgatttggtc ggcacaatca tcgtaccgct gcttactttg atgttcacgc
     2761 ccttcctgtt cggctgggcg cgtccgattc ctatcgattc gcgcaacttc cgcaacccgc
     2821 gccttgcctg gcgttgcgtt gccgcgtccg gcccgctgtc gaatctggcg atggctgttc
     2881 tgtggggcgt ggttttggtg ctgactccgt atgtcggcgg ggcgtatcag atgccgttgg
     2941 ctcaaatggc aaactacggt attctgatca atgcgattct gttcgcgctc aacatcatcc
     3001 ccatcctgcc ttgggacggc ggcattttca tcgacacctt cctgtcggcg aaatattcgc
     3061 aagcgttccg caaaatcgaa ccttatggga cgtggattat cctgctgctt atgctgaccg
     3121 gggttttggg tgcgtttatt gcaccgattg tgcggctggt gattgcgttt gtgcagatgt
     3181 tcgtctgact ggctttcaga cggcataaac gctccagaaa acgcggcagg acatattgcc
     3241 ctgccgcgtt ttcctgtagt gtaatcttat ttttttcatc attattagaa ccaagttgca
     3301 tgataatacc tttcattaac tgaaacactg attaagaaac tccagtctgt ctaatgatga
     3361 ggttttcaca tcgccaaaac ttgccaatca aatgctggat ttattgccgt ctgagatttg
     3421 gtcaaatcca aaggcgacat tcttagaccc tgtgtgtaaa tcaggggtat ttttgcgtga
     3481 aatcgtcaaa cgcttggatg aaggcttgac caatcaaata ccagataaac aaactcgcat
     3541 taaccacatt ttaaaaaatc aagtttttgg aagtactgcc acgtatgtag gtagctttga
     3601 ccgatatttg cataaaaact cctttgctgg tgaaaggaat tattttgcca attttaaaat
     3661 atttctagca ccaaatagta caatgacaaa gacaatcatg ccaatgatta aatcaggata
     3721 gctagaatga gtcaataacg tcaatgctcc cgccgctatc acaccgatat tgatgataat
     3781 gtcattggat gtaaaaatca tgctggcttt gatatggatt tctttatttt gatttttgct
     3841 cagtagatat aagcacagcc agtttgcaat caatgccaaa aatgccgtgc caatcatcag
     3901 ttgataattg ggcagctgct cagcaccgat aaaacgccta atcacttcta tcaccccaaa
     3961 taacgccaat attatctgcg ttatccccgc caaaaatgcc acacgttttt tatacgccag
     4021 cgtcatacca atggctgata gcgccaatat atagacaaag ctgtccgcca gcatatctag
     4081 actatcagca atcagcccca tagaattagc aaaaatacca accgaacact ctatgataaa
     4141 aaacacaaag ttaatcatga gcacttgata taataatctt ttttctaagt gctcatcagg
     4201 cttgttaaac actatcttat caacaatcac ttcggtggaa atgatatgac tatcaaaatt
     4261 aagcggttca agtacttgta aaatcgttgt atcttgatta tcgtgataga cggttaagca
     4321 ccgcccagca atatcaaact gtaattcata aatatcagac acatctttta aacgcatgcg
     4381 aatgagctgt tcttcggacg ggcagtccat tttggtaatg ttaaaaatgg tctttttcat
     4441 ctatttagtt ccttgttttg atcaggttgg ctcaaataaa tctgtgttta tattgctgct
     4501 tggtaatttt tggatggttt gagtaaattg attaggttaa aatttacctt tggaagtacc
     4561 gccacgcata atagtttaga tatgtttata atctctggat aaaaaaacgt aataagtgtt
     4621 tgctggataa caaagtccaa accaatagca gataaaataa ggcatccacc ccctttcttc
     4681 attaaggata agagatatcg agaaacaaat cataactaaa cagaaaaaat tttggagata
     4741 aagccatttc attcccctat tcaagaatct ggccaagata ggtattttgt atactctaga
     4801 aaagaaaggc atttccaagg gaaacatatc agataaaaac ttttgtttat tttttactat
     4861 agatagaacc ctatttctca agataaatcc aaatgcaatg ccaattatca ttattaataa
     4921 acaaaggata gtataactat ggataacctt cattaaacaa aaagaagaaa tggcagataa
     4981 attacatacg atatagtgga atataaaata tttacggtct aaaccttgtt cagttgcaat
     5041 ttttttatac ttaccttgcg caaaaaaatc aaagaaatcc attaaactat ctttcacatt
     5101 agaaatttaa aagctaaata atacaacaaa caatgtgaag tactattcat ggtttattta
     5161 aaaaataata ctattctgaa cattatttag atacagaaat taacaaatta gaactaaaca
     5221 agcttttaaa tactttaatt ttattggaaa gctataaaag gaactataac tttacacact
     5281 agtcacttct ttttaagagg caaaagggat tgggaaggtc gtcttggaga taagcactgg
     5341 tatttcggcc aatggtaaat agagtttacc tcaaataggg tagaacctcc ttcatctgtc
     5401 agttaataac agccactttt acaatgccct gtcaaaataa agcggcacgc ccgatttttc
     5461 actcatcatc atcaaataac ccatcacctt ttgaggccat tcgataccgc gcaccacggt
     5521 cagattcctc aaaacgggga aaaccaaaat atcctccatg ccgattccgc cgttgatgcc
     5581 gtctgaagca ccgtccatca aattctccaa ctcttgcaaa tctgcgttta tgcgttcgag
     5641 atattgggcg gttttattca aattggcgga aaagctgccg atgcttttct cttttttgtc
     5701 tgtaaaatat tttaccgctt ccggcgttgc aaattcgggc agcccgattt tgatcacgcg
     5761 cggctgcacc agtttgtcgt tgtatccgcc caccttgtcc agccacgccc gtatctcggg
     5821 gcggacttcg tctttcagac ggtcttcgcg gtcgaaatgc cgcacaatgt ccaaactctc
     5881 gcccataaac gaaccgtctt ctttttgcag gacgggcact tgtttcgcac cgatcatacc
     5941 gatcggcgtt gcctcgtcgt cgtttgccag cacggcttct tcaacgtccg cgccaaacag
     6001 cccggcagcc atccgcgcac gcacacaaaa cgggcaatgg tcgtaaatat acagtttcat
     6061 caaaatattc ctcgtcaacc tgtcggtacc ggctacctta acaccccgcg ccacccgaaa
     6121 caagtttatc ttcccgccta tgcaccgtaa ataaataa
//
LOCUS       DAWGKF010000119         6140 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.119, whole genome shotgun sequence.
ACCESSION   DAWGKF010000119 DAWGKF010000000
VERSION     DAWGKF010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6140)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6140)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6140
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.119"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            297..995
                     /locus_tag="WHR07_001577"
     CDS             297..995
                     /locus_tag="WHR07_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEZ2130778.1"
                     /translation="MKSKHLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGL
                     VEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEH
                     VVWQKEMLTLARLAAAVDMAAADSKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQTA
                     FDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTID
                     LLADKVREEQKAAQ"
     gene            complement(1052..2056)
                     /locus_tag="WHR07_001578"
     CDS             complement(1052..2056)
                     /locus_tag="WHR07_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HEZ2130779.1"
                     /translation="MQRQTELKNWLQTIYPERDFDLSFAAADADFRRYFRATFSDGSS
                     VVCMDAPPDKMSVAPYLKVQKLFDMVNVPQVLHADTDLGFVVLNDLGNTTFLTAMLQE
                     QGEAAHKALLLEAIGELVELQKASREGVLPEYDRETMLREINLFPEWFVAKELGRELT
                     FKQRQLWQQTVDTLLPPLLAQPKVYVHRDFIVRNLMLTRGRPGVLDFQDALYGPISYD
                     LVSLLRDAFIEWEEEFVLDLVIRYWEKARAAGLPVPEAFDEFYRWFEWMGVQRHLKVA
                     GIFARLYYRDGKDKYRPEIPRFLNYLRRVSRRYAELAPLYALLVELVGDEELETGFTF
                     "
     gene            2126..4534
                     /locus_tag="WHR07_001579"
     CDS             2126..4534
                     /locus_tag="WHR07_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HEZ2130780.1"
                     /translation="MARLFSLKPLVLALGFCFGTHCAAADAVAAEETDNPTAGGSVRS
                     VSEPIQPTSLSLGSTCLFCSNESGSPERTEAAVRGSGEASIPEDYTRIVADKVEGQSQ
                     VQVRAEGNVVVERNRTTLNTDWADYDQSGDTVTAGDRFALQQDGTLIRGETLTYNLEQ
                     QTGEAHNVRMETEHGGRRLQSVSRTAEMLGEGHYKLTETQFNTCSAGDAGWYVKAASV
                     EADREKGIGVAKHAAFVFGGVPIFYTPWADFPLDGNRKSGLLVPSLSAGSDGVSLSVP
                     YYFNLAPNLDATFAPSVIGERGAVFDGQVRYLRPDYAGQSDLTWLPHDKKSGRNNRYQ
                     AKWQHRHDISDTLQAGVDFNQVSDSGYYRDFYGNKEIAGNVNLNRRVWLDYGGRAAGG
                     SLNAGLSVLKYQTLANQSGYKDKPYALMPRLSADWRKNTGRAQIGVSAQFTRFSHDSR
                     QDGSRLVVYPDIKWDFSNSWGYVRPKLGLHATYYSLNRFGSQEARRVSRTLPIVNIDS
                     GATFERNTRMFGGGVLQTLEPRLFYNYIPAKSQNDLPNFDSSESSFGYGQLFRENLYY
                     GNDRINTANSLSAAVQSRILDGATGEERFRAGIGQKFYFKDDAVMLDGSVGKKPRNRS
                     DWVAFASGSIGSRFILDSSIHYNQNDKRAENYAVGASYRPAQGKVLNARYKYGRNEKI
                     YLKSDGSYFYDKLSQLDLSAQWPLTRNLSAVVRYNYGFEAKKPIEMLAGAEYKSSCGC
                     WGAGVYAQRYVTGENTYKNAVFFSLQLKDLSSVGRNPADRMDVAVPGYIPAHSLSAGR
                     NKRP"
     gene            4639..5736
                     /locus_tag="WHR07_001580"
     CDS             4639..5736
                     /locus_tag="WHR07_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEZ2130781.1"
                     /translation="MKIKALMIAAALLAAADVHAAPQKAKTASAKAAKAAKAAKAAKA
                     AKVAKVAKVAKVAKVAKVAKVAKVAATAQKEAAPAQQQGGIRFSDGIAAVADNEVITR
                     RRLAEAVSEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGKRRNIQASEAEIDAV
                     VAKNPALKNLSPAQRRDFADNIIAEKVRQQAVMQNSRVSEAEIDAFLEQAQKQGITLP
                     EGAPLRQYRAQHILIKADSENAAVGAESTIRKIYGEARSGTDFSSLARQYSQDASAGN
                     GGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQFGWHIIKLNEVRDAGTPQERIRN
                     SVRQYIFQQKAEQATVNLLRDLHSGAYVDIR"
BASE COUNT         1534 a         1854 c         1600 g         1152 t
ORIGIN      
        1 ttgaaagggg tgtaaccctt ccgaaccagg gcaacgcata gggcggtgct ttatgtgccg
       61 tcctgtgtgt tggaacatca ttagttcccc aacagccgta tccgtctggg gcgacggcgc
      121 gtattgtacg acagaaaccg cttcagacgg catcgggttt gatgccgtcc gaagcggttt
      181 ccccaaacga aaacgtcctt ttccggaggc aaactgtatc aacacgcgga aatgcaataa
      241 aatagccgga ttccgattga tttccaacat ctgtttccaa catcacggag agccgtatga
      301 aatccaaaca cctcgccctc ggcgttgccg ccctgttcgc acttgccgcg tgcgacagca
      361 aagtccaaac cagcgtcccc gccgacagcg cgcctgccgc ttcggcagcc gccgccccgg
      421 cagggctggt cgaagggcaa aactatactg tccttgccaa cccgattccc caacagcagg
      481 caggcaaagt cgaagtcctt gagtttttcg gctatttctg tccgcactgc gcccacctcg
      541 aacctgtttt aagcaaacac gccaagtctt ttaaagacga tatgtacctg cgtaccgaac
      601 acgtcgtctg gcagaaagaa atgctgacgc tcgcacgcct cgccgccgcc gtcgatatgg
      661 ctgccgccga cagcaaagat gtggcgaaca gccatatttt cgatgcgatg gtcaaccaaa
      721 aaatcaagct gcaagagccg gaagtcctca aaaaatggct gggcgaacaa accgcctttg
      781 acggcaaaaa agtccttgcc gcttacgaat ctcccgaaag ccaggcgcgc gccgacaaaa
      841 tgcaggagct gaccgaaacc tttcaaatcg acggtacgcc cacggttatc gtcggcggca
      901 aatataaagt cgaatttgcc gactgggagt ccggtatgaa caccatcgac cttttggcgg
      961 acaaagtacg cgaagaacaa aaagccgcgc agtaagcccg tttgaaaaat gccgtctgaa
     1021 acttggtttt cagacggcat tttgattggg tttaaaacgt aaagcccgtt tccagttctt
     1081 catcgccgac cagttcgacc aagagcgcgt agagcggggc gagttcggca taacggcgcg
     1141 atacgcggcg caggtaattg aggaaacgcg ggatttcggg acggtatttg tctttgccgt
     1201 cacggtagta caggcgtgcg aagatgcctg caaccttcaa gtgccgctgc acgcccatcc
     1261 attcgaacca gcggtaaaac tcgtcaaacg cttcggggac gggcaagccg gcagcccgcg
     1321 ccttttccca gtagcggata accaagtcca agacaaattc ttcttcccat tcgataaagg
     1381 catcgcgcaa cagcgacacc aaatcgtagg aaatcgggcc gtaaagcgcg tcttggaagt
     1441 ctaaaacgcc cggtctgccg cgcgtcagca tcaggttgcg gacgataaag tcgcggtgca
     1501 catagacttt gggctgcgcc aacaggggcg gcagcagcgt atcgacggtt tgctgccaaa
     1561 gttggcgttg tttgaatgtt aattcgcgcc ccaattcttt tgcgacaaac cattccggga
     1621 acaggttgat ttcgcgcagc atcgtttcac ggtcatattc gggcaaaacc ccttcacggc
     1681 ttgccttctg caattcgacc agctcgccga ttgcctccaa aagcagggct ttgtgcgccg
     1741 cttcgccctg ctcctgaagc atcgcggtca aaaacgtcgt attgcccaag tcgttcaata
     1801 ccacaaaccc caaatccgtg tccgcgtgca atacctgcgg tacattgacc atgtcaaaca
     1861 gtttctgcac tttcaaataa ggtgcgacac tcatcttgtc gggcggtgca tccatgcaga
     1921 cgacactgct gccgtctgaa aacgttgcac ggaaatagcg gcggaaatca gcatccgccg
     1981 ccgcgaagga cagatcgaag tcccgttcgg gatagatggt ctgaagccaa tttttcagtt
     2041 cggtttgccg ttgcataaca gtactaaagc atttcaggtt acaataaacg ctattctaac
     2101 tggcaaaccg acttgagggg cgattttggc tcgtttattt tcactcaaac cactggtgct
     2161 ggcattgggc ttctgtttcg gcacgcattg cgccgccgcc gatgccgttg cggcggagga
     2221 aacggacaat ccgaccgccg gaggaagcgt tcggagcgtg tccgaaccca tacagcctac
     2281 cagcctgagc ctcggttcga cctgcctgtt ttgcagtaac gaaagcggca gccccgagag
     2341 aaccgaagcc gccgtccgag gcagcggcga agcatccatc cccgaagact atacgcgcat
     2401 tgttgccgac aaggtggaag gacagtcgca ggtgcaggtg cgtgccgaag gcaacgtcgt
     2461 cgtcgaacgc aaccggacga ccctcaatac cgattgggcg gattacgacc agtcgggcga
     2521 caccgttacc gcaggcgacc ggttcgccct ccaacaggac ggtacgctga ttcggggcga
     2581 aaccctgacc tacaatctcg agcagcagac cggggaagcg cacaacgtcc gtatggaaac
     2641 cgaacacggc ggacggcggc tgcaaagcgt cagccgcacc gccgaaatgt tgggcgaagg
     2701 gcattacaaa ctgacggaaa cccaattcaa cacctgttcc gccggcgatg ccggctggta
     2761 tgtcaaggcc gcttccgtcg aagccgatcg ggaaaaaggc ataggcgttg ccaaacacgc
     2821 cgccttcgtg ttcggcggcg ttcccatttt ctacacccct tgggcggact tcccgcttga
     2881 cggcaaccgc aaaagcggcc tgcttgttcc ctcactgtcc gccggttcgg acggcgtttc
     2941 cctttccgtt ccctattatt tcaaccttgc ccccaatctc gatgccacgt tcgcgcccag
     3001 cgtgatcggc gaacgcggcg cggtctttga cgggcaggta cgctacctgc ggccggatta
     3061 tgccggccag tccgacctga cctggctgcc gcacgacaag aaaagcggca ggaataaccg
     3121 ctatcaggcg aaatggcagc atcggcacga catttccgac acgcttcagg cgggtgtcga
     3181 tttcaaccaa gtctccgaca gcggctacta ccgcgacttt tacggcaaca aagaaatcgc
     3241 cggcaacgtc aacctcaacc gccgtgtatg gctggattat ggcggcaggg cggcgggcgg
     3301 cagcctgaat gccggccttt cggttctgaa ataccagacg ctggcaaacc aaagcggcta
     3361 taaagacaaa ccgtatgccc tgatgccgcg cctttccgcc gattggcgca aaaacaccgg
     3421 cagggcgcaa atcggcgtgt ccgcacaatt tacccgcttc agccacgaca gccgccaaga
     3481 cggcagccgc ctcgtcgtct atcccgacat caaatgggat ttcagcaaca gctggggtta
     3541 cgtccgtccc aaactcggac tgcacgccac ctattacagc ctcaaccgct tcggcagcca
     3601 agaagcccga cgcgtcagcc gcactctgcc cattgtcaac atcgacagcg gcgcaacttt
     3661 tgagcggaat acgcggatgt tcggcggcgg agtcctgcaa accctcgagc cgcgcctgtt
     3721 ctacaactat attcctgcca aatcccaaaa cgacctgccc aatttcgatt cgtcggaaag
     3781 cagcttcggc tacgggcagc tctttcgcga aaacctctat tacggcaacg acaggattaa
     3841 caccgcaaac agcctttccg ccgccgtgca aagccgtatt ttggacggcg cgacggggga
     3901 agagcgtttc cgcgccggca tcggtcagaa attctatttc aaggatgatg cggtgatgct
     3961 tgacggcagc gtcggcaaaa aaccgcgcaa ccgttccgac tgggtggcat ttgcctccgg
     4021 cagcatcggc agccgcttca tcctcgacag cagcatccac tacaaccaaa acgacaaacg
     4081 cgccgagaac tacgccgtcg gtgcaagcta ccgtcccgca cagggcaaag tgctgaacgc
     4141 ccgctacaaa tacgggcgca acgaaaaaat ctacctgaag tccgacggtt cctattttta
     4201 cgacaaactc agccagctcg acctgtccgc acaatggccg ctgacgcgca acctgtcggc
     4261 cgtcgtccgt tacaactacg gttttgaagc caaaaaaccg atagaaatgc tggcgggtgc
     4321 ggaatacaaa agcagttgcg gctgctgggg cgcgggcgtg tacgcccaac gctacgttac
     4381 cggcgaaaac acctacaaaa acgctgtctt tttctcactt cagttgaaag acctcagcag
     4441 tgtcggcaga aaccccgcag acaggatgga tgtcgccgtt cccggctata tccccgccca
     4501 ctctctttcc gccggacgca acaaacggcc ctgaccgtcg gaaacccggc aggagcaccg
     4561 ttcccgcaca agacggcatt ccaccgacaa ccccaaaccc gccatcaaag gcaggattca
     4621 aacgataagg aaagaatgat gaaaatcaaa gccctgatga ttgccgccgc attgctggca
     4681 gcagccgatg tccacgccgc accgcaaaag gcaaaaaccg catccgccaa agctgccaaa
     4741 gctgccaaag ctgccaaagc tgccaaagct gccaaagttg ccaaagttgc caaagttgcc
     4801 aaagttgcca aagttgccaa agttgccaaa gttgccaaag ttgccgccac ggcgcaaaaa
     4861 gaagccgcac ccgcacaaca gcagggcggt atccgctttt cagacggcat tgccgccgtt
     4921 gccgacaacg aagtcatcac gcgccgccgg cttgccgaag ccgtttccga agccaaagcc
     4981 aacctgccca aagacgcgca gataagcgaa tccgagctgt cccgacaggt gctgatgcag
     5041 cttgtcaacc aatccctgat tgtacaggcg ggcaaacgcc gcaacattca agcaagcgaa
     5101 gcggaaatcg atgccgtcgt cgcaaaaaat cccgccctca aaaacctcag ccccgcccaa
     5161 cgccgcgatt ttgccgacaa catcattgcc gaaaaagtcc gccagcaggc agtgatgcag
     5221 aacagccgcg tgagcgaagc tgaaatcgat gccttcctcg agcaggcgca aaaacaaggc
     5281 atcaccctgc ccgaaggcgc accgttgcgc caataccgcg cccaacacat cctgattaaa
     5341 gctgacagcg aaaacgccgc cgtcggcgcg gaaagcacca tccgcaaaat ctacggagag
     5401 gcccgcagcg gcacagactt ttccagcctg gcgcgccaat attcgcaaga cgcgagcgcg
     5461 ggcaacggcg gagatttggg ctggtttgcc gacggcgtga tggttcccgc ctttgaagaa
     5521 gccgtccacg cgctcaaacc cggacaggtc ggcgcgcccg tccgcaccca attcggctgg
     5581 catatcatca aattgaacga agtgcgcgat gccggcacac ctcaggaacg tatccgcaat
     5641 tccgtgcggc aatacatctt ccaacaaaaa gccgaacagg caaccgtcaa cctgttgcgt
     5701 gacctgcatt ccggcgcgta tgtcgacatc cgctaaggcg gtttgaagca aaaagccata
     5761 ccgatcggca aaaatccggg cggtatggct ttttggattt cgagttactt ttacaccgtc
     5821 attcatcatt cccgcgaaag cgggaatcta gaaacgaaaa gtaacaggaa tttatcggga
     5881 atggctggaa tttaaaggtc tggattcccg ctttcgcggg aatgacggga ttttgggttg
     5941 tggtaattta tcggaaaaac aaaaaaacct atgccgtcat tcccgagcag gcgggaatcc
     6001 ggttatttaa aactgcagaa atttatccga agcaacaaca atctttccat cgtcattccc
     6061 gcgtaggcgg gaatctagca acgaaaagta acaggaattt atcgggaaaa cagaaacctc
     6121 tatgccgtca ttcccgcgaa
//
LOCUS       DAWGKF010000120         6120 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.120, whole genome shotgun sequence.
ACCESSION   DAWGKF010000120 DAWGKF010000000
VERSION     DAWGKF010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6120)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6120)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6120
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.120"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(152..2080)
                     /gene="dnaK"
                     /locus_tag="WHR07_001581"
     CDS             complement(152..2080)
                     /gene="dnaK"
                     /locus_tag="WHR07_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEZ2130782.1"
                     /translation="MAKVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSVIAYLD
                     GGEILVGAPAKRQAVTNAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKANNGDAW
                     VKAQGKELSPPQISAEVLRKMKEAAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRI
                     AGLEVKRIINEPTAAALAFGMDKGDNKDRKVAVYDLGGGTFDISIIEIANLDGDKQFE
                     VLATNGDTFLGGEDFDQRLIDYIIDEFKKEQGIDLKQDVMALQRLKEAAEKAKIELSS
                     GQQTEINLPYITMDATGPKHLAMKITRAKFESLVEDLIQRSIEPCKVALKDAGLSTSD
                     IDDVILVGGQSRMPKVQEAVKAFFGKEPRKDVNPDEAVAVGAAIQGEVLSGGRSDVLL
                     LDVTPLSLGIETMGGVMTKLIQKNTTIPTKASQVFSTAEDNQSAVTIHVLQGERERAS
                     ANKSLGQFNLGDIAPAPRGMPQIEVTFDIDANGILHVSAKDKGTGKAANITIQGSSGL
                     SEEEIERMVKDAEANAEEDKKLTELVASRNQAEALIHSVKKSLADYGDKLDAAEKEKI
                     EAALKEAEEAVKGDDKAAIDAKAEALGAASQKLGEMVYAQAQAEAQAGESAQTNASAK
                     KDDDVVDADFEEVKDDKK"
     gene            complement(2288..2560)
                     /locus_tag="WHR07_001582"
     CDS             complement(2288..2560)
                     /locus_tag="WHR07_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130783.1"
                     /translation="MKKTGKYLIYTAAFTAFCFAFQENRSEAKQPDITLSASLCEQFN
                     ILNAKDMDAEQVSLSKECDIIESSHDWEKEYGNLNEQEMLAGIVYE"
     gene            2748..3434
                     /locus_tag="WHR07_001583"
     CDS             2748..3434
                     /locus_tag="WHR07_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ2130784.1"
                     /translation="METFKDRLVFLWKSEAKQAKIASDIEMTIAGFSRIWNEGGLPKS
                     ETLKKIKQLKGCSIDWLLTGEGNPFPDEAPKKSLAYDTLGNEVDTDEFVFVPRYDIRA
                     AAGYGQFVDHEEPVFTMAFRRHWIENYVTRDTKNLSVISVKGDSMEGVLNDGDSILVN
                     HGENTPRDGLYVLRINENLLVKRLQIVPGGIINVISANEAYPAFEINLNDLTDDVEII
                     GRVEWFGRTI"
     gene            3566..3904
                     /gene="erpA"
                     /locus_tag="WHR07_001584"
     CDS             3566..3904
                     /gene="erpA"
                     /locus_tag="WHR07_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HEZ2130785.1"
                     /translation="MSDESPIIFTDSCCAKVADLIAEENNPDLKLRVFVNGGGCSGFQ
                     YGFTFDEIKNDDDFEIEKNGLVFLVDPMSYQYLVGAEIDYTENLQGSQFVIRNPNAET
                     TCGCGSSFSV"
     gene            3921..4067
                     /locus_tag="WHR07_001585"
     CDS             3921..4067
                     /locus_tag="WHR07_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130786.1"
                     /translation="MPSERSDGIFTFGKYIIGMNSHIIRLFEDESGFPKGTGGTVSGV
                     FVPL"
     gene            4064..4528
                     /locus_tag="WHR07_001586"
     CDS             4064..4528
                     /locus_tag="WHR07_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HEZ2130787.1"
                     /translation="MIEMSKDYRNDLYDVYVSYPPKVDCGLIRECLRENLGEEKAEGL
                     IESLDSKPQVLVEEKCTWEKRAELHDYFSYLGLDIITRRYMELETVVPPEEGEGEGEG
                     GDGEIPEYLELHSEREDDISAPSQAEPPPRNIKPLVFGLLIAFLGYLLGKIF"
     gene            4563..6074
                     /gene="ubiB"
                     /locus_tag="WHR07_001587"
     CDS             4563..6074
                     /gene="ubiB"
                     /locus_tag="WHR07_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HEZ2130788.1"
                     /translation="MKWLKRLTVIVGTFYRYRLAGLCASLMGSGWICALLKMMPQSSK
                     LKNEPPAVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLS
                     REQIEKSLGQSIEKLYAEFETEPVASASIAQVHKARLHSGERVAVKVLRPNLLPLIEQ
                     DLSLMRFGAVWVERLFADGKRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFQNS
                     NMLIVPKVFYDYCTSDVLTIEWMDGTPVADIAKLKADGIDLHKLADYGVEIFFTQVFR
                     DGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA
                     HIESGWVPADTRAEELEAAVRAVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQ
                     LVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVKWMNGQVGPKALWRNLKNEAPDWAQ
                     IIPSLPRKISALIDENRQQEMRDAYIHLVKVQQRQSLWLAVIAVVLLLILLLK"
BASE COUNT         1421 a         1351 c         1593 g         1755 t
ORIGIN      
        1 aaaaatttcc agagaaccga tacaacagtt ggaacttggg tttgggaata ttacggtaga
       61 tgaacttgga acctctgtta tgctatggtc ttttatctca attgaaaaaa gcgcgaatca
      121 aacggttcgc gcttttttca gacggcatca attatttttt gtcgtctttt acttcttcaa
      181 agtcggcatc tacaacgtca tcgtctttct ttgcagaagc attggtttgc gcactttcac
      241 ctgcttgggc ttcggcttgc gcttgagcgt aaaccatttc ccccagtttt tggctggctg
      301 cacccaaagc ttcggctttg gcatcgatag cggctttgtc gtcgcctttc acggcttctt
      361 cggcttcttt cagcgcggct tcgatttttt ctttttcggc tgcgtcaagt ttgtcgccgt
      421 agtccgccaa agattttttc acggagtgaa tcagggcttc ggcttggttg cgggaagcga
      481 ccaattcagt cagcttttta tcttcctcag cattggcttc ggcatctttc accatgcgtt
      541 cgatttcttc ttcgctcaaa cctgaagaac cttggatggt aatgttggct gctttaccgg
      601 tgcctttgtc tttggcagaa acgtgcaaga taccattggc gtcgatgtcg aaagtaactt
      661 caatttgcgg cataccgcgt ggtgcaggtg cgatgtcgcc caagttgaac tgacccaaag
      721 atttgttggc agaagcgcgt tcgcgttcgc cttgcagtac gtggatggtt actgcgcttt
      781 ggttgtcttc ggcggtagag aacacttgcg acgctttagt cggaatagtt gtgttctttt
      841 gaatcagctt ggtcatcacg ccgcccatgg tttcgatacc caaagacaga ggcgttacgt
      901 ccagcagcaa tacgtcgcta cggccgccgc tcaatacttc accttgaatc gctgcgccta
      961 cggcaacggc ttcgtcaggg ttcacgtctt tacgaggctc tttaccgaag aaggctttaa
     1021 cggcttcttg tactttcggc atacggcttt gaccaccgac caaaattacg tcgtcgatgt
     1081 cgctggtgct caagccggca tctttcaatg cgactttaca aggctcgata gaacgttgga
     1141 tcaaatcttc aaccaggctt tcaaatttgg cacgggtaat tttcatcgcc aagtgtttcg
     1201 gaccggttgc gtccatagtg atgtacggca ggttgatttc ggtttgctga ccgctggaca
     1261 attcgatttt ggctttttcg gcagcttctt tcagacgttg cagagccatt acgtcttgtt
     1321 tcaaatcaat gccttgttct tttttgaact cgtcaatgat gtagtcgatc aagcgttggt
     1381 cgaagtcttc accgcccaag aaagtatcgc cgttggtagc caatacttca aattgtttgt
     1441 caccgtcgag gttggcgatt tcgatgatgg agatatcgaa agtaccgcca cccaagtcat
     1501 atacggctac tttgcggtct ttattgtcgc ctttgtccat accgaatgcc aaagcggctg
     1561 cggttggttc gttgatgata cgttttactt ccaaacctgc gatgcggcct gcgtctttag
     1621 tcgcttgacg ttggctgtcg ttgaagtagg caggaacggt aatcacggct tcagtgactt
     1681 tctcgcccaa gtaagcttcg gcggcttctt tcattttacg caggacttct gcggaaattt
     1741 gcggcgggga cagctctttg ccttgcgctt tcacccatgc gtcgccattg ttggctttga
     1801 tgatttcgaa aggcatagat tcgatgtcgc gttggacttc tttgtcttca aatttatgac
     1861 cgatcaaacg tttggcggcg taaatagtgt ttttggcgtt ggttacggct tggcgttttg
     1921 ccggtgcgcc gacgaggatt tcgccgccgt ccaaataagc gataacggac ggcgtggtgc
     1981 gtgcaccttc tgcattttcg atcactttgg tttgaccgtt ttcagaaatg gccaaacaag
     2041 agttggttgt acctaagtcg ataccgatta cttttgccat gtggataatc ctatttgatt
     2101 ttgcttattt tgagaaatat gttggaacat tttgtcccga tgggctgtaa atagggcggg
     2161 cggcgggctg tttcaagcta cagcatggct ataagtatat aactttatga atatattggt
     2221 tttatattta atttaataca tttggctcca atgcatttaa gcataatatt tcaaatggca
     2281 ggcaggttta ttcatagacg atgccggcga gcatttcctg ttcgttcaag ttgccgtact
     2341 ctttttccca gtcgtgtgaa gactcgatga tgtcgcattc tttggaaagg gagacttgtt
     2401 ctgcatccat atctttggcg ttcagtatgt tgaattgttc gcacagggat gcggataaag
     2461 tgatgtcggg ctgtttggct tcagaacggt tttcttggaa ggcaaagcag aatgcggtaa
     2521 atgccgcagt atagataaga tatttgccgg ttttcttcat ttttctatcc tttttctgtc
     2581 aatttaggat taaacctatg gaaaaatctg aaaaattatg tattaagtaa gaaaaatcat
     2641 aatttaaatt tagtttatca tagttgttcc gtttttggga tagctaaggt aaaatatatt
     2701 tcatgtttac tttagatgat tgaatgaagg ggagcggaag gatatttatg gaaaccttta
     2761 aagacagact ggttttttta tggaaaagcg aagcgaagca ggcaaaaatc gcatccgata
     2821 ttgaaatgac gattgcgggc ttcagcagga tatggaatga aggcggtctg ccgaagtctg
     2881 aaacattaaa aaaaatcaag cagttgaagg ggtgtagtat cgattggctg ctgaccgggg
     2941 agggtaatcc gtttccggat gaagccccaa aaaaatccct tgcttacgat actttgggca
     3001 atgaagtcga tacggacgag tttgtcttcg tgccgagata tgatattcgg gcggctgcgg
     3061 gatacgggca gtttgtcgat catgaggaac cggtatttac aatggcgttc agacggcatt
     3121 ggattgagaa ttatgttacc cgcgatacga aaaacctgtc tgtaatttcc gtcaaggggg
     3181 attcgatgga gggggttttg aatgacggcg attcgatttt ggtcaatcat ggtgaaaata
     3241 cgccgaggga cggtctgtat gtgttgcgga ttaatgaaaa tctgctggtt aaacgtttac
     3301 agattgtacc gggcgggatt atcaatgtga tttctgcaaa cgaggcttat cctgcttttg
     3361 aaatcaattt gaacgatttg accgatgatg tggagattat cgggcgtgtc gagtggttcg
     3421 gcaggacgat ttgagtttgg ggcttgaaat tgcaggcggt caaacttatc tattggaaca
     3481 attccttttt caaaggcgaa gcctgcttgc ctttgaaggg ggtttgagag agaatgcaga
     3541 aaatattata ttaaggaata acaccatgtc ggatgaaagc cctattattt ttactgacag
     3601 ctgctgtgcc aaagttgccg atttgattgc cgaagaaaac aatcccgatt tgaaattgcg
     3661 ggtttttgtc aatggcggcg gctgttcggg tttccagtac ggatttactt ttgacgaaat
     3721 caaaaacgac gacgattttg aaattgagaa aaacggtttg gtctttttgg tcgatccgat
     3781 gagctatcaa tatctggtcg gtgcggaaat cgactatacg gaaaatttgc agggttcgca
     3841 attcgtcatc cgcaatccga atgcggaaac aacctgcggt tgcggatcgt cgttttccgt
     3901 atgaccgctt ggtttgtgtg atgccgtctg aacgttcaga cggcattttt acttttggaa
     3961 aatatattat cgggatgaat tcacatataa tccgattgtt tgaagatgaa tcgggtttcc
     4021 cgaaaggaac gggcggaacg gtatcaggcg tatttgttcc cttatgattg agatgagtaa
     4081 agattaccga aacgatttgt acgatgtata tgtttcctac ccgcccaaag tggattgcgg
     4141 gcttatccgg gagtgtctca gggagaatct cggcgaagaa aaggcggaag gattgattga
     4201 gtccctcgat tccaaaccgc aagtgctggt tgaggaaaaa tgtacctggg aaaagcgggc
     4261 agagttgcac gattatttca gctatttggg tttggatatt attactcgga gatatatgga
     4321 gttagaaacg gtcgtgccgc cggaggaagg ggagggcgaa ggagaaggcg gggatgggga
     4381 aatacccgaa tatcttgaac ttcatagcga acgggaagat gatatttccg caccttcgca
     4441 agccgaaccg ccgccccgca atatcaaacc gctggttttc gggctgctga tagccttttt
     4501 gggctatctg ctcggtaaga ttttttgatt gtccgataaa tgctgtattc gggattttat
     4561 atatgaaatg gttgaaacgc ctgacggtta ttgtcgggac tttttaccgc tatcggctgg
     4621 caggtctgtg cgcttcgctg atgggtagcg gttggatatg cgctctgctg aaaatgatgc
     4681 cgcagtcgtc caaattgaaa aacgaaccgc ctgccgtccg tctgcgcctt gccttggaaa
     4741 gcctggggcc gattttcatc aagttcgggc aggttttgtc cacacgccct gatttgattc
     4801 cgcacgatta cgccgtcgaa ctggcaaagc tgcaagacaa agtgccgcct tttgacgcgc
     4861 ggctttcgcg tgaacaaatc gaaaaatcgt tgggtcagtc catcgaaaag ctgtatgcgg
     4921 aatttgaaac cgagcccgtc gccagcgcgt ccatcgccca agtacacaaa gcccgcctgc
     4981 attcgggcga acgagtggct gtcaaagttt tgcgccccaa ccttttgccc cttatcgaac
     5041 aggatttgtc gctgatgcgt ttcggcgcgg tttgggtgga gcgtctgttt gccgacggca
     5101 agcgtctgaa gccgctcgaa gtggtggcgg agttcgacaa atacctgcac gacgagttgg
     5161 atttgatgcg cgaagccgcc aatgccggac agctcgggcg caatttccaa aacagcaata
     5221 tgctgattgt gcccaaggtg ttttacgact actgcaccag cgacgtgctg acaatcgaat
     5281 ggatggacgg cacgccggtt gccgacatcg ccaaactcaa agcagacggc atcgatttgc
     5341 acaaactcgc cgattacggc gtggaaatct ttttcacgca ggtcttccgc gacggctttt
     5401 tccacgcgga tatgcacccc ggcaatattt tggttgccgc cgacaaccgc tacatcgccc
     5461 tcgatttcgg catcgtcggc acgctgaccg attacgacaa acgttatctc gccatcaatt
     5521 tcctcgcctt tttcaaccgc gattaccggc gcgtcgccac cgcccacatc gaatcgggct
     5581 gggtgcctgc cgacacgcgt gcggaagaat tggaagccgc cgtccgcgcc gtgtgcgaac
     5641 cggtgttcaa caaaccgatt tcgcagattt ccttcggctt ggtgctgatg cgcctgtttg
     5701 aagtcagccg ccgcttcaat gtcgaaatcc aaccgcagct tgtgctgctg caaaaaacgc
     5761 tgctcaacat cgaaggcttg ggccgccagc tcgatcccga tttggacttg tggaaaaccg
     5821 ccaaaccgtt tttggtgaaa tggatgaacg ggcaggtcgg ccctaaagcc ctttggcgca
     5881 acctcaaaaa cgaagccccc gactgggcgc aaatcatccc ttcattgccg cgcaaaatca
     5941 gtgcgttgat tgatgaaaac cgccagcagg aaatgcgtga tgcctatatc catttggtca
     6001 aagtgcagca gcggcaaagc ctgtggctgg ctgtgattgc ggttgttttg ctgctgattt
     6061 tgcttttgaa ataggctttg tccgaatcat cgcccgactc cgcccgttta taaggaaatc
//
LOCUS       DAWGKF010000121         6104 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.121, whole genome shotgun sequence.
ACCESSION   DAWGKF010000121 DAWGKF010000000
VERSION     DAWGKF010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6104)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6104)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6104
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.121"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(108..809)
                     /locus_tag="WHR07_001588"
     CDS             complement(108..809)
                     /locus_tag="WHR07_001588"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HEZ2130789.1"
                     /translation="MSLKTVAVIGAMEQEIELLREMMENVKAVSFGKFAAYEGELAGK
                     RMVLALSGIGKVNAAVATAWIIREFAPDCVINTGSAGGLGKGLKVGDVVIGTETAHHD
                     VDVTAFGYVWGQVPQLPAVFVSDDLLVGKAKRAARTFEGAAVEQGLIVSGDRFVHSSE
                     GVAEIRKHFPEVKAVEMEAAAIAQTCHQLETPFVIIRAVSDSADEKADISFDEFLKTA
                     AASSAKMVAEIVKSL"
     gene            995..2107
                     /locus_tag="WHR07_001589"
     CDS             995..2107
                     /locus_tag="WHR07_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEZ2130790.1"
                     /translation="MTAKEELFAWLRHMNKNKGSDLFVTTHFPPAMKLDGKITRITDE
                     PLTAEKCMEIAFSIMSAKQAEEFSSTNECNFAISLPDTSRFRVNAMIQRGATALVFRA
                     ITSKIPKFESLNLPPVLKDVALKKRGLVIFVGGTGSGKSTSLASLIDYRNENSFGHII
                     TIEDPIEFVHEHKNCIITQREVGVDTENWMAALKNTLRQAPDVILIGEIRDRETMDYA
                     IAFAETGHLCMATLHANSTNQALDRIINFFPEERREQLLTDLSLNLQAFISQRLVPRD
                     GGKGRVAAVEVLLNSPLISELIHNGNIHEIKEVMKKSTTLGMQTFDQHLYQLYEKGDI
                     SLQEALKNADSAHDLRLAVQLRSRRAQSSSPDLELL"
     gene            2141..3118
                     /locus_tag="WHR07_001590"
     CDS             2141..3118
                     /locus_tag="WHR07_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HEZ2130791.1"
                     /translation="MIYPWHNEQWRQIAEHWERRPNAWLFAGKKDTGKTTFARFVAKA
                     LLCETPAQGCKPCGECMSCHLFGQGSHPDFYEITPLADEPENGRKLLQIKIDAVREII
                     DNVYLTSVRGGLRVILIHPAESMNVQAANSLLKVLEEPPPQVVFLLVSHTADKVLPTI
                     KSRCRKMVLPAPSHEEALAYLRERGVAEPEERLAFHSGAPLFDEADGVRALRIKLLDI
                     LAEPRLLKILDYAALFDKEKLPLDVFVGWMQKWLVDLGLCLQHMKPVYYPAYEDRLLQ
                     TVSGFRPRNVFAAEDMLKQLAPYGFHTLNVKMQIEHLLINYLELKKENG"
     gene            3122..3472
                     /locus_tag="WHR07_001591"
     CDS             3122..3472
                     /locus_tag="WHR07_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEZ2130792.1"
                     /translation="MSDGQNIPAKMMSLQLKDMNLLYSSYMPFLEHGGLFVQTDDVFS
                     IGDDILLAVEILNFPKLFLPTKVAWINPARTSSKPKGVGLAFTKHENCLKVKDQIEVE
                     LGSTISGSRPTFTM"
     gene            3477..4256
                     /locus_tag="WHR07_001592"
     CDS             3477..4256
                     /locus_tag="WHR07_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEZ2130793.1"
                     /translation="MHIIDSHCHLNFEGLKERLPEVLSNMEANGVGQALAISVSRESF
                     AEVSAIAEVYEHIYCTIGVHPDSKEAEEFSIAEMVAAAAHPKVVGIGETGLDYYWCKG
                     DLSWQHKRFADHIEAANQTGLPVIVHTRDAAADTLSILKECRVNSGVIHCFSEDIGFA
                     RAAMDLGLYISFSGIVTFKNAPLVQEAAKYVPDDRILVETDAPFLAPVPKRGRQNEPA
                     FVRHTAEHIAKLRNQTLEQVAAYTTENFYRLFKKVPDMRAV"
     gene            4282..4496
                     /locus_tag="WHR07_001593"
                     /pseudo
     CDS             4282..4496
                     /locus_tag="WHR07_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219531.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
     gene            4597..4908
                     /gene="grxD"
                     /locus_tag="WHR07_001594"
     CDS             4597..4908
                     /gene="grxD"
                     /locus_tag="WHR07_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HEZ2130794.1"
                     /translation="MASIHDQIKEIVTTHRVVLFMKGTKQFPQCGFSSRAVQILNAAG
                     CTDYVTVNVLENPEVRQGIKEYSDWPTIPQLYVNGEFVGGSDILMEMYEAGELQELLK
                     A"
     gene            5014..5640
                     /gene="upp"
                     /locus_tag="WHR07_001595"
     CDS             5014..5640
                     /gene="upp"
                     /locus_tag="WHR07_001595"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HEZ2130795.1"
                     /translation="MNVNVINHPLVRHKLTLMREADCSTYKFRTLAIELARLMAYEAS
                     RDFEIEKYLIDGWCGQIEGDRIKGKTLTVVPILRAGLGMLDGVLDLIPTAKISVVGLQ
                     RDEETLKPVSYFEKFVDSMDERPALIIDPMLATGGSMVATIDLLKAKGCKNIKALVLV
                     AAPEGVKAVNDAHPDVTIYTAALDSHLNENGYIIPGLGDAGDKIFGTR"
     gene            5663..5983
                     /locus_tag="WHR07_001596"
     CDS             5663..5983
                     /locus_tag="WHR07_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2322 family protein"
                     /protein_id="HEZ2130796.1"
                     /translation="MNFQDYLATFPSIDHLGGLDVQDADGKTVHHIPAVQGKLGSLKL
                     YNALAERFDGKLDKEAAEQGLIWFAEHVADARAHPGKHPNIDLLEKVVQSGETLLLKP
                     LAAQ"
BASE COUNT         1515 a         1574 c         1605 g         1410 t
ORIGIN      
        1 aaatgccgtc tgaacaaaca gcggtgcgtc cgaatatcgg gcgcaacgtg gaaatagccc
       61 gatattctaa cggaaaaccg ctgttttggc atgatttgat aaaggtttta taaagatttg
      121 acgatttctg ccaccatttt tgcagaactt gccgccgccg ttttcaaaaa ttcgtcaaag
      181 ctgatgtctg ccttttcgtc cgccgaatcg gaaaccgcgc ggatgatgac gaaaggcgtt
      241 tccaactgat gacaggtttg ggcgattgcc gccgcttcca tttctaccgc cttaacttcg
      301 gggaagtgct tgcggatttc cgccacgcct tcgctgctgt ggacgaagcg gtcgccgctg
      361 acaatcagac cttgttctac cgccgcgcct tcaaacgtcc gcgccgcccg ttttgccttg
      421 ccgaccaaga ggtcgtctga aacgaatacg gcgggcagtt gcggcacttg tccccaaaca
      481 tagccgaatg cggttacatc gacatcgtgg tgtgcggttt ccgtgccaat caccacgtcg
      541 ccgactttca aacccttgcc caagccgccc gcgctgccgg tgttgataac gcagtccggt
      601 gcgaattcac ggataatcca agccgttgca accgccgcgt tgaccttgcc gatgccgctc
      661 aatgcaagca ccatgcgttt tcccgctaat tcgccttcat aggcggcaaa cttgccgaaa
      721 gagacggctt tgacattttc catcatctcg cgcaaaagct cgatttcttg ttccattgcg
      781 ccgataacgg ctactgtttt caaagacata ttgctgacct gttgtgaatt tcggatagaa
      841 tgcctgatta tacacgctaa cacggcagga ttgagtggag gtggtttgtc cgtgccgtct
      901 gaaacggttt cagacggcac ggcgggtttt tggtagaatg ggaaggtaca gattgtttga
      961 agattagggg acgaggatgt ttaccgatga aaatatgacc gcaaaggaag aactgttcgc
     1021 atggctgcgc catatgaaca aaaacaaagg ttccgacctg tttgtgacga cccatttccc
     1081 gcccgcgatg aagttggacg gcaaaatcac ccgcatcacg gacgaaccgc tgacggcgga
     1141 aaaatgtatg gaaatcgcct tttcgattat gagtgcgaag caggcggaag aattttcatc
     1201 gaccaacgag tgcaacttcg ccatcagcct gccggacacc agccgcttcc gcgtcaatgc
     1261 gatgatacag cgcggcgcga cggcgttggt attccgcgcg attaccagca agattcccaa
     1321 gtttgaaagc ctgaacctgc cgcctgtctt gaaggatgtc gcgctgaaaa aacgcgggct
     1381 ggttattttt gtcggcggca ccggctcggg caaatcgact tcgcttgcct cgcttatcga
     1441 ctaccgcaat gaaaattcgt tcggacacat catcaccatc gaagacccga tcgagtttgt
     1501 ccacgaacac aaaaactgca tcatcaccca gcgcgaggtc ggcgtggata cggaaaactg
     1561 gatggcggcg ttgaaaaaca cgctgcgtca ggcgccggat gtgattctga tcggcgaaat
     1621 ccgcgaccgc gaaacaatgg actacgccat tgcctttgcc gaaacggggc atttgtgtat
     1681 ggcgacgctg cacgccaaca gcaccaatca ggcactcgac cgcatcatca actttttccc
     1741 cgaggagcgg cgcgaacaat tgctgacgga tttgtcgctc aaccttcagg cgtttatttc
     1801 gcaacgcctc gttccgcgag acggcggcaa gggcagggtg gcggcagtcg aggtgctgct
     1861 caattcgccc ctgatttcgg agttgattca caacggcaac atccatgaaa tcaaagaagt
     1921 gatgaaaaaa tccactaccc tgggtatgca gaccttcgac caacaccttt accaattgta
     1981 tgaaaaaggc gatatttccc tgcaagaagc attgaaaaat gccgattccg cacacgattt
     2041 gcgtttggcg gtacagttgc gcagccgccg cgcgcaaagt tccagccccg atttggaact
     2101 gctctgatgg cggtatggat ttccggacgg atggtttgaa atgatttatc cgtggcataa
     2161 tgagcaatgg cggcagattg cggaacattg ggagcgtcgt cccaatgcat ggctgtttgc
     2221 cggcaaaaaa gatacgggga aaactacatt tgcccgcttt gtggcgaagg cactgttgtg
     2281 cgaaacccct gcacagggct gcaaaccctg tggcgaatgt atgtcctgcc atctgtttgg
     2341 acagggaagc catcccgatt tttacgaaat cacgcctctg gcggacgagc ccgaaaacgg
     2401 acgcaaactg ttgcagatca aaatcgatgc cgtcagggaa atcatcgata atgtgtacct
     2461 gacttcggta cggggcggtt tgcgcgtgat cctgattcat cctgcggaaa gtatgaatgt
     2521 ccaagccgcc aacagtttgt tgaaagtgtt ggaagagccg ccgccacaag tggtcttttt
     2581 gctggtcagc cacacggcgg acaaggtttt accgaccatt aaaagccgct gccggaagat
     2641 ggttttgccc gcgccttccc atgaagaggc attggcatat ctgcgtgaaa ggggtgtggc
     2701 ggaacctgag gaacgtctgg ctttccattc cggagcaccg ctgtttgatg aggcggacgg
     2761 tgtccgtgcg ttgcggatta aactgttgga tattttggca gaaccaaggt tgttgaagat
     2821 tttggattac gccgcgcttt tcgataagga gaaacttccg ctcgacgtat ttgtcgggtg
     2881 gatgcagaag tggctggtcg atttgggatt gtgcctgcaa cacatgaaac ccgtctatta
     2941 tcccgcttat gaagacaggc tgcttcagac ggtatccggt ttccgcccgc gcaatgtatt
     3001 tgcggcggag gatatgctca aacagcttgc cccctacggg tttcatactt taaatgttaa
     3061 aatgcagatc gagcatctgc tcatcaacta tttggaattg aagaaagaga acgggtgaat
     3121 tatgtcagac ggacaaaata ttccggcaaa aatgatgtcg ttgcagctga aagacatgaa
     3181 tctgctgtac agctcctata tgccgttttt ggagcatggc ggtctgtttg tgcagaccga
     3241 cgacgtattt tccatcgggg acgatattct gcttgccgta gaaatcctca acttccccaa
     3301 actgttcctg ccgaccaagg tcgcctggat taatcctgcg cgtacttcct ccaaacccaa
     3361 aggggtgggg ctggcattca caaaacacga aaactgcctg aaagtcaaag accagatcga
     3421 agtcgaactg ggcagcacaa tcagcggcag cagacctacg tttaccatgt aacgccatgc
     3481 atatcatcga ttcgcactgc cacctcaatt ttgaaggttt gaaagaacgc ctgcccgaag
     3541 ttttgtccaa catggaagca aacggcgtgg ggcaggcgct cgccatcagc gtcagcaggg
     3601 aaagttttgc cgaagtatcc gctatcgccg aagtttatga acatatttac tgcacaatag
     3661 gcgtacatcc cgacagcaag gaagccgaag aattttctat tgcggaaatg gttgctgcag
     3721 ccgcccatcc gaaagtggtc ggcattggcg agacgggctt ggattattac tggtgcaaag
     3781 gcgatttgtc ctggcaacac aaacgctttg cagaccacat cgaagcagcc aatcaaaccg
     3841 gactgcccgt tatcgtccat acgcgtgatg cggcggcgga caccttgtct atcctgaaag
     3901 aatgccgggt taattcgggc gttatccact gtttttccga agacatcggt tttgcccgtg
     3961 cagcaatgga tttggggctt tatatttctt tctcgggaat cgttaccttt aaaaacgcac
     4021 ccttggttca ggaggcggca aaatacgttc cggacgaccg cattttggtg gaaaccgatg
     4081 cgccgttcct cgcccccgtt cccaaacgcg gcaggcagaa cgaaccggct tttgtgcgcc
     4141 ataccgccga acatatcgcc aaattgcgga accaaacatt ggaacaggtt gcggcatata
     4201 cgacggaaaa cttttaccgg ctgtttaaaa aagtacccga tatgcgggcc gtctgaccct
     4261 gtaccgacga taaggaaaac catgaaggca attcatccgt atgcatgtcc gcgctgctgc
     4321 cggctgcctg ccaacacgtt tcggacaggc atggcaaatt ccgcttccaa attctgcatt
     4381 gccaaaggcg gcagacggga agcaaaaaag acgaaagcgg cggcggatat gccctgtgcc
     4441 atttgccgga cagcaggatt gtcgaggagt gggaatattt ccgttcacaa cattgatact
     4501 gcgcgatata cggcaaatat tgtgggaagt ttccgctttt gcgtataatg cgccctacct
     4561 gacaaatttt gtcaacttta tcaaaaggaa taagcgatgg cttccatcca cgaccaaatt
     4621 aaagaaatag taacgacaca ccgcgtcgta ttgtttatga aaggtacgaa gcagtttccg
     4681 caatgcggtt tctcttcccg cgccgtgcaa atcctgaacg cggcgggctg caccgattac
     4741 gttaccgtca acgtattgga aaatcccgaa gtacgccaag gcattaagga atacagcgat
     4801 tggccgacca tcccccaact ttatgtgaac ggcgagtttg tcggcggttc ggacatcctg
     4861 atggaaatgt atgaggcagg cgagctgcaa gagctgctga aagcctgatg gattcggcaa
     4921 tgccgtctga acgtgtttca gacggcattt tcttttccgg caaatcaaaa aaaagtataa
     4981 tggcgcgtct caaaatcaca ctggaacacc gcgatgaacg ttaatgttat caaccatccg
     5041 ctcgtccgcc acaaattaac cctgatgagg gaggcggatt gcagcaccta caaattccgg
     5101 acgcttgcca tcgagctggc gcgcctgatg gcatacgagg caagccgtga ttttgaaatc
     5161 gaaaaatacc ttatcgacgg atggtgcggt cagattgaag gcgatcgcat caagggcaaa
     5221 acattgaccg tcgttcccat cctgcgtgca ggtttgggta tgcttgacgg cgtactcgac
     5281 ctgattccga ctgccaaaat cagcgtagtc ggactgcagc gcgacgagga aacgctgaaa
     5341 cccgtttcct acttcgagaa attcgtggac agcatggacg aacgtcctgc cctgattatc
     5401 gacccgatgc tggcgacggg cggttcgatg gttgccacca tcgacctttt gaaagccaag
     5461 ggctgcaaaa acatcaaggc actggtgctg gttgccgcgc ccgagggtgt gaaggcggtc
     5521 aacgacgcgc atcccgacgt tacgatttac accgccgcgc tcgacagcca cttgaacgag
     5581 aacggctaca tcatccccgg cttgggcgat gcgggcgaca agattttcgg cacgcgctaa
     5641 ctgactgatt ttcggagttg atatgaattt tcaagactat ctcgccacat ttccttcaat
     5701 cgaccatctg ggcggtttgg acgttcagga tgccgacggc aaaacggttc accacattcc
     5761 cgccgttcag ggtaagctcg gttcgctcaa gctgtacaat gctttggcag aacgttttga
     5821 cggaaaattg gataaagaag cggcagaaca gggtttgata tggtttgccg aacacgttgc
     5881 cgacgcgcgc gcccatcccg gcaagcatcc caatatcgac ctgcttgaaa aagttgtgca
     5941 aagcggcgaa accttgctgc tcaagccgct tgccgcgcaa taattttcga ccatgccgtc
     6001 tgaaatccgt ttcagacggc attttatcgg aaagaagacc gtaaaacggg cattttcttt
     6061 tctatttcag gatacgggca atgatgtttc aacacacagg acga
//
LOCUS       DAWGKF010000122         6009 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.122, whole genome shotgun sequence.
ACCESSION   DAWGKF010000122 DAWGKF010000000
VERSION     DAWGKF010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6009)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6009)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6009
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.122"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(959..1204)
                     /locus_tag="WHR07_001597"
     CDS             complement(959..1204)
                     /locus_tag="WHR07_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130797.1"
                     /translation="MLKSIEFNSHIRNRLAAYLKGRGLDFQTAMREEKGNKEIAAIVH
                     SGLPTLVRKLYSEQKMQKFFWEKRDLIADYISRRMQG"
     gene            1316..1744
                     /locus_tag="WHR07_001598"
     CDS             1316..1744
                     /locus_tag="WHR07_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HEZ2130798.1"
                     /translation="MMFSWFKLFHLFFVISWFAGLFYLPRIFVNMAMIDVPRGNPEYV
                     RLSGMAVRLYRFMSPLGFGAVVFGAAIPFAAGWWGSGWVHVKLCLGLMLLAYQLYCGV
                     LLRRFQDYSNAFSHRWYRVFNEIPVLLMVAALYLVVFKPF"
     gene            1756..2232
                     /locus_tag="WHR07_001599"
     CDS             1756..2232
                     /locus_tag="WHR07_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HEZ2130799.1"
                     /translation="MPIEIERRFLIGNDNWRQYADEPLLLRQGYLSVEKERTVRVRIA
                     GQRAWLTLKGYISEISRSEFEYEIPLADAEKMMETMCPFKMEKWRYPVRWGGSLFEID
                     VFLGDNAPLVVAEIELPDENADFDRPDWLGREITADGMFTNAYLSKHPFSSWKNAV"
     gene            complement(2582..3070)
                     /locus_tag="WHR07_001600"
     CDS             complement(2582..3070)
                     /locus_tag="WHR07_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEZ2130800.1"
                     /translation="MLKITLIAACAENLCIGAGNAMPWHIPEDFAFFKAYTLGKPVIM
                     GRKTWESLHVKPLPGRRNIVISRQADYCAAGAETAASLEAALALCAGAEEAVIMGGAQ
                     IYGQAMPLATDLRITEVDLSVEGDAFFPAIDRTHWKEAERTERRVSSKGTRYAFVHYL
                     RY"
     gene            complement(3138..4193)
                     /gene="aroG"
                     /locus_tag="WHR07_001601"
     CDS             complement(3138..4193)
                     /gene="aroG"
                     /locus_tag="WHR07_001601"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HEZ2130801.1"
                     /translation="MTHHYPTDDIKIKEVKELLPPIAHLYELPISKEASGLVHRTRQE
                     ISDLVHGRDKRLLVIIGPCSIHDPKAALEYAERLLKLRKQYENELLIVMRVYFEKPRT
                     TVGWKGLINDPHLDGTFDINFGLRQARSLLLSLNNMGMPASTEFLDMITPQYYADLIS
                     WGAIGARTTESQVHRELASGLSCPVGFKNGTDGNLKIAIDAIGAASHSHHFLSVTKAG
                     HSAIVHTGGNPDCHVILRGGKEPNYDAGHVSEAAEQLRAAGVTDKLMIDCSHANSRKD
                     YTRQMEVAQDIAAQLEQDGSNIMGVMVESHLVEGRQDKPEVYGKSITDACIGWGATEE
                     LLALLAGANKKRMARAG"
     gene            complement(4355..4582)
                     /locus_tag="WHR07_001602"
     CDS             complement(4355..4582)
                     /locus_tag="WHR07_001602"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130802.1"
                     /translation="MGNTRIPIKSFFKQLVLFVFNIFLAYEILPDVQAESAAGCSVPD
                     CRGNGKTDVPCGFVRMNGGYCFYQSVSFSLE"
     gene            4805..5113
                     /locus_tag="WHR07_001603"
     CDS             4805..5113
                     /locus_tag="WHR07_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130803.1"
                     /translation="MTPWADAYADLRGKTKVMTTQMCASRDVSKSAKGWSVGIGLNVG
                     KQLTDSVGLEFDPYYRHKTIYKPREIVLDGDKTKMGRSKSNEYGFRVAATFYSQLKSK
                     "
     gene            complement(5162..5266)
                     /locus_tag="WHR07_001604"
                     /pseudo
     CDS             complement(5162..5266)
                     /locus_tag="WHR07_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(5370..5576)
                     /locus_tag="WHR07_001605"
     CDS             complement(5370..5576)
                     /locus_tag="WHR07_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130804.1"
                     /translation="MFDGAKVVRRVEGNLWVFGMVALEKTCFKGQMPSENRFQTAFSV
                     YLKQTGKGSNILQSSYSHKRFIVN"
     gene            5867..6009
                     /locus_tag="WHR07_001606"
                     /pseudo
     CDS             5867..6009
                     /locus_tag="WHR07_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237266.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
BASE COUNT         1504 a         1514 c         1378 g         1613 t
ORIGIN      
        1 cagtgtcatg agaaattttc ctttgtcaag tgttaaaatt ataatgatta tatactacat
       61 tatactacat cgcaatgaaa aatcaggaaa agcaaaaaac cctccgccgt cattcccgcg
      121 aaagcgggaa tctagaattt taatgccgca agaatttatc aaggatggtc ggggtttaaa
      181 ggtctggatt cccgcctgcg cgggaatgac ggtttagaaa tcacctgaaa cgagaaaaag
      241 aaccgaaacc ggacaagtcg gattcccgca cgggcgggaa ggacggaatt tcagattgtt
      301 gtttttgatt ttctgttttg tgggaataac gggattttgg atgatgtgca tttatcggga
      361 aaactaaaaa ccctccgccg tcattcccgt gaaagcggga atctagaatt tcaatgccgc
      421 aagaatttat cggggatgtc cggggtttaa aggtctggat tcccgcctgc acgggaatga
      481 cggtttagaa atcacctgaa acgagaaaaa gaaccgaaac cagataagtc ggattcccgc
      541 acgggaggga aggacgggat ttcaggttac tgtttttgat tttctgtttt gtgggaataa
      601 cgggattttg gatgatgtgc attttcggga aaactaaaaa ccctccgccg tcattcccgc
      661 gaaagcggga atctagaatt ttaatgcggc aaaaatttat cggaaaaaac cgaagtttaa
      721 agacctagat tcccgcctgc gcgggaatga cggtttagaa atcacccgaa acgagaaaaa
      781 gaaccgaaac cgaacaagcc ggattaccgc ctgcgcggga atgacggctc aaaagttacg
      841 aaacgaaaaa taaccgaaac cagacaagtc ggattcccgc gcgggcggga atgacgataa
      901 gcgtaatttc aatctgccat attgtctttt cacttgcctg aaaacagatt tcagccacct
      961 atccctgcat ccggcggctg atgtagtcgg caatcaaatc ccgcttttcc caaaaaaact
     1021 tctgcatttt ttgttcggaa tacagtttgc ggaccagagt gggcaaaccg ctgtggacga
     1081 tggcggcgat ttctttgttg cctttttcct cccgcatcgc cgtctgaaaa tccaaacccc
     1141 tgcctttcag atatgctgca aggcggttgc ggatgtggga attgaattcg atggatttga
     1201 gcattttgcc tccgttttgc ggtaaggatt tattcgattt gtttatccgc ctgattttat
     1261 cacgtttccc aagcggtttg cctgtacaat accgcttttc ggcagggtgt gggcgatgat
     1321 gttttcttgg ttcaagctgt ttcacttgtt ttttgtcatt tcgtggtttg cagggctgtt
     1381 ttacctgccg aggattttcg tcaatatggc gatgattgat gtgccgcgcg gcaatcccga
     1441 gtatgtgcgt ctgtcgggca tggcggtgcg gctgtaccgt tttatgtcgc cgttgggctt
     1501 cggcgcggtc gtgttcggcg cggcgatacc gtttgccgcc ggctggtggg gcagcggctg
     1561 ggtacacgtc aaactgtgtt tgggcttgat gctcttggct taccagttgt attgcggcgt
     1621 gctgctgcgc cgttttcagg attacagcaa tgctttttca caccgctggt accgcgtgtt
     1681 caacgaaatc cccgtgctgc tgatggttgc cgcgctgtat ctggtcgtgt tcaaaccgtt
     1741 ttgacggagc atcttatgcc gatagaaatc gaacgccgtt ttttgattgg aaacgacaac
     1801 tggcggcaat acgccgacga accgctgctg ttgaggcagg gttatctgtc tgttgaaaaa
     1861 gaacgcaccg tccgtgtccg cattgccgga caacgggcgt ggctgacgct gaaaggctat
     1921 atttcggaaa tcagccgcag tgagtttgaa tacgaaatcc cgcttgccga tgcggaaaag
     1981 atgatggaaa cgatgtgccc gtttaaaatg gaaaaatggc gttatccggt cagatggggc
     2041 ggcagcctgt ttgaaatcga tgtttttctt ggcgataatg cgcctttggt cgtcgcggaa
     2101 atcgagttgc ccgacgagaa tgccgatttt gaccgtccgg actggctggg acgggaaatc
     2161 actgccgacg gtatgtttac caatgcttat ttgagcaaac atccgttctc aagctggaaa
     2221 aatgccgtct gaagcggctt cagacggcat tctccgacaa ccatcgcaaa tccaaagaca
     2281 gcctctatat ccttatttct gctttctttg ttccattatt cccaataaat ccccataacc
     2341 taaaatctcg tcattcccgc tcaggcggga atccggttct ttaaacttcg gttttttccg
     2401 ataaattgct ttagcttttc gtttccggat tcccgctttt gcgggaatga cgatggaaga
     2461 ttgttgttat ttcggataaa ttaccctaac tttaaaatcc cggattccca tcttcggggg
     2521 aataacaata ttttctattt cagcccatca tttgcggggg attttataga gagtttatat
     2581 ttcaatatct caaataatgc acaaaagcat agcgcgtgcc tttgctgctg acacggcgtt
     2641 ccgtccgctc tgcttctttc caatgcgtcc ggtctattgc ggggaaaaat gcatctcctt
     2701 ccacagacaa atccacttcg gttatccgca aatcggtcgc caatggcatc gcttgtccgt
     2761 atatctgcgc gccgcccata atgacggctt cttccgcgcc tgcgcacaat gccaatgccg
     2821 cctccaaact tgccgccgtt tccgcgcctg ccgcgcaata atccgcctgc cggctgatga
     2881 cgatgttcct ccgtccgggc aggggtttga cgtgcaggga ttcccacgtt ttccgcccca
     2941 taatgacggg tttgcccaag gtataggctt tgaaaaatgc gaaatcttcg ggaatgtgcc
     3001 aaggcatcgc attgcccgcc ccgatgcaca ggttttccgc acacgccgca attagggtta
     3061 ttttgagcat atttcctcca caaaaatgcc gtctgaacgc ttcagacggc attttatgac
     3121 attccgtgtc aaaaatctca accggcgcgc gccatacgtt ttttgtttgc acctgccaac
     3181 aatgccaaca gttcttcagt cgcgccccaa ccgatacacg catcggtaat gcttttgccg
     3241 tacacttccg gcttatcctg tctgccttcg accaaatggc tttccaccat cacgcccata
     3301 atattgctcc cgtcctgttc caattgggca gcaatatctt gtgccacttc catctgccgg
     3361 gtgtaatcct tgcggctgtt ggcgtggctg caatctatca tcagcttatc ggttacccct
     3421 gccgcacgca gttgttccgc cgcctcgctg acgtgtcccg catcataatt cggctctttt
     3481 ccgccgcgca aaatgacatg acagtcggga ttgccgccgg tatggacaat ggcggaatgt
     3541 ccggccttgg ttacagacaa gaaatgatgc gaatggctcg ccgcaccgat tgcgtcgatg
     3601 gcaatcttca aattgccgtc cgtaccgttt ttaaagccga cggggcagga cagcccgctt
     3661 gccaattcgc ggtgaacttg gctttcggtc gtccgcgcac cgattgcccc ccaagaaatc
     3721 aagtccgcat aatattgcgg cgtaatcata tccaaaaact cggtagaggc aggcataccc
     3781 atattgttca gcgacaacaa caggctgcgc gcctgacgca aaccgaaatt gatatcgaac
     3841 gtaccgtcca aatgcgggtc gttaatcaaa cctttccaac ccaccgtcgt cctcggcttc
     3901 tcgaaataaa cgcgcatcac aatcaaaagc tcgttttcat actgcttgcg gagtttcaac
     3961 aaacgctccg catattccaa cgccgctttc ggatcgtgaa tcgaacacgg cccgataata
     4021 accaacagcc gcttgtccct gccgtgaacc aaatcggaaa tttcctgacg ggtgcggtga
     4081 accaagcccg aagcctcttt ggaaatcggc agctcgtaaa gatgggcaat cggcggcagc
     4141 agttctttaa cttctttaat cttaatatcg tcagtggggt aatggtgtgt catcttgcat
     4201 ctttcctgat ggttttttat acgcggctta ggttacatcg tttaccttgc acaaacaagt
     4261 gcaacatatt actacaaagc tattttattt caaaataact gatatatctt ttttcataga
     4321 ttttaaattt catattttta atattttagg aattttattc caaagaaaaa gaaacagatt
     4381 gataaaaaca atacccgcca ttcattcgga caaaaccgca cggaacatcc gttttcccat
     4441 ttccacgaca atccggtaca gaacaccccg ctgccgattc cgcctgcaca tccggcaaaa
     4501 tttcatacgc aaggaaaatg ttgaaaacaa aaagaactaa ttgcttgaaa aaagatttaa
     4561 tgggaatgcg ggtatttccc acactttctc catttattta tcctcattat aaaaacatga
     4621 aaaaaaatcc tgcttgcact ctcacttgca gccgtgtccg ccgttacggt agccgatatt
     4681 cctgagtcta acggcaaggg caaagccatc atcggcgata aggaaaaaca ccgttaccaa
     4741 gcatgaaaac cttgttttga aagtctatgg cgaaatccgc caagatttgg gggacggatg
     4801 atccctgacc ccttgggcgg atgcatatgc agatttgcgc ggcaaaacca aagtgatgac
     4861 gacccagatg tgtgcttccc gcgatgtcag caaaagcgcc aaaggttgga gtgtcggtat
     4921 cggtctgaat gtaggcaaac agttgaccga cagcgtcggt ctcgagtttg atccatacta
     4981 ccgtcacaaa acaatctaca aaccccgtga gattgtcttg gacggtgaca aaaccaaaat
     5041 gggccgctcc aaatccaacg agtacggctt ccgcgtagcc gcaacgttct atagtcaatt
     5101 aaaatcaaaa taggacagta gtgcatcgtc aaatcgggcg taatcagaca aaacggtttg
     5161 cagatgcaga acgggcggta acttccagta caaaaaacgg agcagttctt tctgtacttt
     5221 tttctttaat ttgcagtgtg ttatcttcat atttcgaggg taacatatct gctaatctag
     5281 tacagcccct agtttaaagc tttgtttctt aagtccgcag agtatgccat ggttagacct
     5341 tcaaagttga gtattgtact attttgtttt taattaacta taaaacgctt gtgtgaatag
     5401 gaagactgca gaatattgct gccttttcct gtttgcttta aataaacaga aaatgccgtc
     5461 tgaaaccgat tttcagacgg catttgtccc ttaaaacacg ttttttcaag cgcgaccata
     5521 ccaaacaccc acaggttgcc ttccaccctt cgtacaacct ttgctccatc aaacatccac
     5581 ttcctaaata ctgatgtctg cttaggttga atcggcattc gtacgattac ggcacaccgc
     5641 ctaatctgta cctgcgtctg ttgcgcccaa taccaaagac tacctgaaaa tctcccaaac
     5701 ttttcaggta gccttatcac gttttcgact gttaccacac gcccaaagac cgcctgaaac
     5761 cctttttcag acgttccgct ccgatacccc cccaacaaaa cgccgcccga acgcatgttc
     5821 agacggcatt ttctttgcgt cgattcattc cccgatatag cgcaggtctt tttccagcca
     5881 tttcccttcc aaacaaaaaa gcaccgacgg cggccgatgc cccttccttt acaggttccc
     5941 ctatttttta gctgcgggca gagccggttt ggctggggct tttggtgcgg gcgcgccgac
     6001 cgaagcctg
//
LOCUS       DAWGKF010000123         5976 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.123, whole genome shotgun sequence.
ACCESSION   DAWGKF010000123 DAWGKF010000000
VERSION     DAWGKF010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5976)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5976)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5976
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.123"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(199..2286)
                     /locus_tag="WHR07_001607"
     CDS             complement(199..2286)
                     /locus_tag="WHR07_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003700725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HEZ2130805.1"
                     /translation="MDYLSRLSFGFNKKLPVILQTEVAECGLACLTSILSYYGFHTDL
                     RTLRQKYTLSLKGANLADIMRFGNEMNLTPRALRLELDELSNLQLPCILHWNLNHFVV
                     LCSISKDSIVIMDPAVGMRKIKMDEVSQKFTGIALELFPNTHFEEKKETKKIKILSLL
                     RGISGLKRSLIQMLILAISLEVFALVSPFFMQWVIDHVIVTADKNLLLTLTLGFGLLA
                     ILQQLISLLQAWVGMHLSTTLNLQWKANIFKRLLDLPNDYFSKRHLGDVISRFGSIDH
                     IQETLTSTFFVLVLNSLMAIFTFVLMTIYSTQLSLIVLLTLVLYILIRWLAYYPLRNA
                     TEENIVHEAKQNSYFMETIRGIQSVKLFDKHYQRHGTWMSLFVNTVNTKLTTDKLSAL
                     FEFSNKLLFSMENIIIIYLGASAILDGSFTVGVLMAFLAYKGQFESRTASLVDQYIQI
                     KMLGLHAERLADITLNETETEIIKYNHIPKLDNEQLVLKVENVSFRYADNEPYLFENI
                     NLEFKDNEAVVLTGQSGRGKSTLLNILTGSLKPETGTVSINGHDIYQVSPSFIRGLSG
                     IVRQDDVLFAGSIGENISFFDESPNMELIEQCAKMAQIHDDILKMPMGYETLIGDMGN
                     ILSGGQKQRVILARALYKRPKILFLDEASSHLDVENEQKINHNLKSLGIMKIMVAHRQ
                     ETIQSADKILNLG"
     gene            complement(2289..3554)
                     /locus_tag="WHR07_001608"
     CDS             complement(2289..3554)
                     /locus_tag="WHR07_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEZ2130806.1"
                     /translation="MSHLFRKEVFVAQQNKWTGQVILTRPFSFLFLTFCAFLIALCII
                     IFLIFGSYTNKTTVEGQLLPTMGVVRVYSSDIGTITHKFVEDGNFVKAGEPLFKLSTS
                     RFGEKGNVQAKLAAEANLKKTLALQELERLKRIHQNEQKNVHNNIHRLNNQLENIKQQ
                     ITGQNRQIRLAEKTLNKNKFLASQGAVSQQDKMTAESHLLEQRSRLESLKREQNNAIR
                     ELDEQKITLSSLPERHKTELSQLNRAITEMNQEILDFDLKSEQTIRASKSGYISTINV
                     DIGQQVEPSKLLLSIVPEQTELVANLYIPSKAVGFIKPKDKVVLRYQAYPYQKFGHAT
                     GEIISVARTALGKQELSGLGIIFTNPTLLNEPAYLVKVKLEKQTIKAYGENKPLQIGM
                     ILEADILHERKKLYEWVLDPLYSISGKIN"
     gene            complement(3599..3736)
                     /locus_tag="WHR07_001609"
     CDS             complement(3599..3736)
                     /locus_tag="WHR07_001609"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130807.1"
                     /translation="MNTETIYATVFCILAATISGLLVKFNVIKIETSINSKFMLLGIS
                     I"
     gene            complement(4777..5013)
                     /locus_tag="WHR07_001610"
     CDS             complement(4777..5013)
                     /locus_tag="WHR07_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin transporter"
                     /protein_id="HEZ2130808.1"
                     /translation="MKELHTSELVEVSGGKFHISAQGGGNLGKKDMVAVGKIGASYSP
                     NNSGVEFSVSKQFGYVQGFGVQFSKPTFGFSKKW"
BASE COUNT         1912 a         1067 c         1020 g         1977 t
ORIGIN      
        1 aaattagccc aaaaatggga acaagagcag aaaaaacaac aaattcaaca gaaaaaggaa
       61 actgaaaaat cgccaaaaca caaagccagt cgtgatgatt gggaaatgga acgttaaacc
      121 gctattttca tgtattctat taaattattt gaaaaaagac ttcacttttt gttaaagaaa
      181 aatgaagtct tgttctgttc aacctaaatt cagaatttta tctgccgatt gaattgtttc
      241 ttggcggtgt gcaaccatta ttttcataat accaagactt tttaggttat ggttaatttt
      301 ttgttcattt tctacatcta aatggctact tgcttcgtct aaaaatagaa ttttgggtcg
      361 tttatacaat gcacgagcca agataactct ctgcttttgt ccacctgata agatatttcc
      421 catatcgcca atcaaggtct catagcccat tggcatttta agtatatcgt catgtatttg
      481 tgccattttt gcacattgtt caatgagctc catatttggg ctttcatcaa aaaatgaaat
      541 attttcccca atagaacctg caaaaaggac atcatcttgg cgaacaatcc cgctcaatcc
      601 cctaataaag gatggagaaa cttgatatat atcatgccca ttaatactaa ctgtaccagt
      661 ttcaggtttt aggctacctg ttaaaatgtt taacaaagtg gacttcccac gaccagattg
      721 tcctgttaaa acaactgctt cattatcttt aaattccaaa ttaatgtttt caaaaagata
      781 tggctcatta tcagcatatc tgaatgagac gttttcaact ttaagaacca gttgttcatt
      841 atctaattta ggtatatgat tatacttaat aatttcagtt tctgtttcat ttaaagtaat
      901 gtcagccaaa cgttcagcat gaagccctaa cattttgatt tggatgtatt ggtcaacgag
      961 agaagctgtt ctgctttcaa attgcccttt ataagccaaa aaagccatca gaacaccgac
     1021 tgtaaatgaa ccatctaaaa ttgcgcttgc accaagataa attatgataa tattttccat
     1081 gctaaacaac agtttatttg aaaattcaaa taaagcagag agtttatctg ttgtcagctt
     1141 ggtattgact gtattcacaa ataggctcat ccaagtgcca tgtctttgat aatgtttatc
     1201 aaataattta actgattgga taccacgaat ggtttccatg aaatatgagt tttgtttggc
     1261 ttcatgaaca atattttctt ctgttgcatt tcttaatggg taatatgcaa gccaacgaat
     1321 tagtatgtac aaaacaagtg ttaaaagaac aatcagcgat aattgagtgc tgtaaattgt
     1381 cattaacacg aaagtaaaaa tagccattaa gctatttaaa actaaaacaa aaaaagtaga
     1441 agttagtgtt tcttggatat gatctattga accaaatctt gaaatcacat ctcctaaatg
     1501 tcgtttactg aaatagtcat taggtaagtc aagtaacctt ttaaatatat tggctttcca
     1561 ttgtaaatta agagttgtag ataggtgcat acctacccat gcttgtaaca ggctaattaa
     1621 ctgttgcagg atagccagta aaccaaatcc caaagtaagg gtcagtaata aatttttatc
     1681 agcagttaca atgacatggt ctattaccca ttgcataaag aatggactaa ccaatgcaaa
     1741 gacttccaaa gaaatagcta atataagcat ttgaattaaa gagcgtttta agcctgaaat
     1801 cccccttaat agagataata ttttgatttt ctttgtttct tttttctctt caaaatgggt
     1861 attggggaat aattctaggg caatccctgt gaatttttgt gaaacttcgt ccattttgat
     1921 ttttcgcata ccgacagcag ggtccataat gacgatactg tctttggaaa tggaacaaag
     1981 tacaacaaaa tggtttaagt tccaatggag aatgcagggt agttgtaaat ttgacagctc
     2041 atctaactct aaacgcaaag ctcgtggcgt taaattcatt tcattgccaa atctcatgat
     2101 gtctgcaaga tttgcgccct ttaatgacag ggtgtatttt tggcgtaacg ttcttaaatc
     2161 agtgtgaaag ccataatagg acaagatgga tgtcaggcat gctaaaccac attcagcaac
     2221 ttctgtttgc agaatgacag gtagcttttt gttaaatcca aaggacagtc ttgataaata
     2281 atccattttt aattgatttt tcctgaaatg ctgtaaagtg ggtcaagtac ccattcgtac
     2341 aatttttttc gttcatggag aatatctgct tctaaaatca tgccaatttg aagcggcttg
     2401 ttttctccgt atgctttaat cgtttgtttt tccaatttaa ctttcacaag ataggcaggt
     2461 tcatttaata aggttgggtt agtgaaaatg atacctaaac ctgatagctc ttgtttaccg
     2521 agagcagttc tggcaactga aataatttct cctgtggcat gtccaaattt ttggtaaggg
     2581 tacgcttggt aacgtaaaac aactttatct ttcggtttaa taaaaccaac agctttactg
     2641 ggtatgtaaa gattggcgac caattcagtt tgttcaggga caatgcttaa cagcaattta
     2701 gacggttcaa cttgttgccc tatatcaaca ttaattgttg aaatataacc tgatttacta
     2761 gctcgtatgg tttgttcgga tttcaaatca aaatccaaaa tttcttggtt catttccgta
     2821 atcgcacggt tgagttggct caattcggtt ttatggcgtt caggcaggct gcttaatgtg
     2881 attttctgtt catcaagttc cctgattgca ttattttgtt cacgttttag gctctccaaa
     2941 cgtgagcgtt gttccaataa atggctttcg gcggtcatct tatcttgttg ggatactgcg
     3001 ccttgactgg ctaaaaactt gttcttgtta agggtttttt ccgctaaacg aatttgacga
     3061 ttttgccctg taatttgctg tttaatattc tctaattgat tgtttaaacg atgaatgttg
     3121 ttatgaacat ttttttgctc attttgatga atgcgcttta aacgttccaa ttcttgtaat
     3181 gccaaagttt ttttaaggtt ggcttctgct gccaatttgg cttgtacgtt tcctttttcg
     3241 ccaaaacgcg atgtggaaag tttgaacaat ggttcgccag ctttgacaaa gttaccatct
     3301 tcaacaaatt tatgcgtaat cgtgccgata tcggaagagt aaacacgaac cacccccata
     3361 gttggaagta attgaccttc aacggttgtt ttattggtat agctaccaaa aatcaaaaag
     3421 ataatgatac acagagcaat gagaaaagcg caaaaagtca gaaataaaaa agagaatgga
     3481 cgggtcaaga taacctgacc tgtccactta ttttgttggg ctacaaagac ttcttttcgg
     3541 aataagtggg acatttatta ttatttctta aaaaaaatgg atagaaaaac accaataatt
     3601 aaatacttat gcctaataac ataaatttgc tattgattga tgtttctatt ttaattacat
     3661 taaatttaac caataatcca gaaatggttg cagctaaaat gcaaaagaca gtggcgtaaa
     3721 tggtttcagt attcataatt tttctctttc aaaattgttc aatctaaata gaaaaaggta
     3781 acttcaatac atattgctgt aactgaaatt accttttcct taatgatgta attatcttat
     3841 ggcttcatca tgccacgacc gatattgtat ccgccagcag cagagaaaat accagctcca
     3901 attgcgccaa cccagcctac tggtcctgtc cacttgttcc gttgagctac aaagacttct
     3961 ggtctgaaaa atgagtgatt gttagacatg tgtacttatt tatgtttctt tgattgggat
     4021 aaatttgtaa aaacaaaaaa aaggcaagtt gttattatag aagaacttaa aatgcttaac
     4081 atactcattg aggtttgtac cacataatga gatacgagat aatttgttgg gagtaaaatc
     4141 aaaaaaaaga ttaaatattt aaaataatca ctatattttt tcattatttg ttcctttttg
     4201 tatttaagtt cttatgaaaa actagggtat tttgaataga aaatatcaaa ataccctagt
     4261 tttattaagg aatattacca ccaacaagtg cttccatatt gtacagcacc agtgattgca
     4321 ccaccaatag ctccgaattt cgcacctgga atagcaccaa taccacctgc aaatgaacca
     4381 acaattgccc caccagctgc tccacctaat gcactaccaa tggtattttt tgagaaatca
     4441 cgccagttac aagcagcacc agaaacttgt taaatttcat tcaaagtcaa aacttgcata
     4501 atattcacct ttgttaagtg tggttgagaa aaaagtaaat tttcatcgtt actcattatt
     4561 tgcaatcatg catatgctgt aaccaagcac tatattcagt tggatcatag tttttactac
     4621 tgggttgtct gatatgacta ttggcactat tggcacaact gggattagca actttattgt
     4681 gagtacctaa tggattgata tttcctgtaa agtggctatt gcatgcgctt aatgagcata
     4741 gatttattaa tgtcagaaag gataaaacaa aaaatcttac cattttttac taaaaccaaa
     4801 agtaggtttc gaaaactgta caccaaaacc ttgtacatat ccaaattgct tgctaacaga
     4861 aaactctact ccactattgt taggggaata ggaagcacca attttaccaa cagcaaccat
     4921 atctttttta cctaggttgc cgccaccctg tgcagagata tggaatttgc cacctgacac
     4981 ttcaactaat tcagaggtgt gtaactcttt catgattttc tcctgtaaag aagtatggtt
     5041 ggaaatgtaa atcagaatta acctttctca agtttaattt aatacttttt tttgcaagta
     5101 ttttatttta aattaaatca atattttaaa aatatttact tgtatactga aaaagaaact
     5161 cctaatggtg gagtggggct tttgtttaag taagcattga aaaaatttaa atttcccatt
     5221 atgattaact taatgcaaga gctttttcag gacgtacaaa ccagcgaacg ggcgttctga
     5281 tgtgggcagg ttggttgtcg ctaaccaatt tcagtagctc aatcgtcaga ttggtatccg
     5341 accctatcaa gctaaggaga ggctgcggct actacacaaa gcacctgaaa ttattgggtg
     5401 cttttgtctt tttatggcat tgtaccaatt tgtgtaccac gagggcttgt tcgcccaaac
     5461 gcggtaacaa ctgaatacac actttccccc tcaacttctt tgcgttctaa aacgactgtc
     5521 ccaatccgag aatagacaat cataggacga tgattgcccc ttacatcact aaattcacta
     5581 aaaatttttg cgcctgattg aaaaatcatt tccacataaa agggttacac ctgtttcatc
     5641 gtggcttaat ccaaaccgcg ttaaatctgc tttgtgttct gccaaaatgt gaatcacacc
     5701 aaagccgtga ttaacctttt tgtgttcgcc gtgttttaaa acaatttgac ctgccgggaa
     5761 gtctgctcta ttgttcggac aataggggga atataccaat tactttaact acatcatttt
     5821 ttgacatttt tcttgccttt caatttaaaa tccaaaatca tactgccata atttagcaat
     5881 ccaaaaaaat ttaggcagca gtaatggttt cgtattttag aaaacgaaac ttggtttggt
     5941 gttttgaagc atttcagtac acaaacatgg aatttt
//
LOCUS       DAWGKF010000124         5950 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.124, whole genome shotgun sequence.
ACCESSION   DAWGKF010000124 DAWGKF010000000
VERSION     DAWGKF010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5950)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5950)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5950
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.124"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..374)
                     /locus_tag="WHR07_001611"
     CDS             complement(<1..374)
                     /locus_tag="WHR07_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HEZ2130809.1"
                     /translation="MLYPEKMSGMAGRHPYGVRSGLRRNGLKLWDIHFRMTRFIVARC
                     GLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAE
                     YRAQNGAFKSVDDLTKVKGIGPA"
     gene            complement(410..523)
                     /gene="rrf"
                     /locus_tag="WHR07_001612"
     rRNA            complement(410..523)
                     /gene="rrf"
                     /locus_tag="WHR07_001612"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(620..3511)
                     /locus_tag="WHR07_001613"
     rRNA            complement(620..3511)
                     /locus_tag="WHR07_001613"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            complement(3918..3993)
                     /locus_tag="WHR07_001614"
     tRNA            complement(3918..3993)
                     /locus_tag="WHR07_001614"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3958..3960),aa:Ala,seq:tgc)
     gene            complement(3999..4075)
                     /locus_tag="WHR07_001615"
     tRNA            complement(3999..4075)
                     /locus_tag="WHR07_001615"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4039..4041),aa:Ile,seq:gat)
     gene            complement(4176..5716)
                     /locus_tag="WHR07_001616"
     rRNA            complement(4176..5716)
                     /locus_tag="WHR07_001616"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT         1286 a         1737 c         1281 g         1646 t
ORIGIN      
        1 gcagggccga tgccctttac cttggtcaaa tcgtccacag acttgaacgc accgttttgc
       61 gcacggtatt ccgcaatggc cttcgccttc gcagggccta tgcccggcag cgcctccaac
      121 tcctgctgcg aagccgcatt gatgtttacc gccgcaaggg agaaggcgca ggagaacagc
      181 atacagaaca gcacgaacat tttcttcatg gtttttcctt taagggttgc aaacaataaa
      241 ccgcatcttg cgacgataaa acgagtcatt ctaaaatgaa tatcccaaag tttcaagccg
      301 ttcctccgca aacccgaccg gacgccgtac ggatgccgtc ccgccatccc cgacattttt
      361 tccgggtaaa gcaaaaaccc ccgaataatc gggggttttc tgaaagggtg tttggcagtg
      421 acctactttc gcatggaaga accacactat catcggcgct gagtcgtttc acggtcctgt
      481 tcgggatggg aaggcgtggg accaactcgc tatggccgcc aaacttaaac tgttacaaat
      541 cggtaaagcc ttaatcaata tattcggtaa tgactgaatc agtcagtaag cttttatctc
      601 ttgaagttct tcaaatgata gagtcaagcc tcacgagcaa ttagtatggg ttagcttcac
      661 gcgttaccgc gcttccacac cccacctatc aacgtcctgg tctcgaacga ctctttagtg
      721 cggttaaacc gcaagggaag tctcatcttc aggcgagttt cgcgcttaga tgctttcagc
      781 gcttatctct tccgaactta gctacccggc tatgcaactg gcgttacaac cggtacacca
      841 gaggttcgtc cactccggtc ctctcgtact aggagcagcc cccgtcaaac ttccaacgcc
      901 cactgcagat agggaccaaa ctgtctcacg acgttttaaa cccagctcac gtaccacttt
      961 aaatggcgaa cagccatacc cttgggaccg actacagccc caggatgtga tgagccgaca
     1021 tcgaggtgcc aaactccgcc gtcgatatga actcttgggc ggaatcagcc tgttatcccc
     1081 ggagtacctt ttatccgttg agcgatggcc cttccataca gaaccaccgg atcactatgt
     1141 cctgctttcg cacctgctcg acttgtcggt ctcgcagtta agctaccttt tgccattgca
     1201 ctatcagtcc gatttccgac cggacctagg taaccttcga actcctccgt tacgctttgg
     1261 gaggagaccg ccccagtcaa actgcctacc atgcacggtc cccgacccgg atgacgggtc
     1321 tgggttagaa cctcaaagac accagggtgg tatttcaagg acggctccgc agagactggc
     1381 gtctctgctt ctaagcctcc cacctatcct acacaagtga cttcaaagtc caatgcaaag
     1441 ctacagtaaa ggttcacggg gtctttccgt ctagcagcgg gtagattgca tcttcacaac
     1501 cacttcaact tcgctgagtc tcaggaggag acagtgtggc catcgttacg ccattcgtgc
     1561 gggtcggaac ttacccgaca aggaatttcg ctaccttagg accgttatag ttacggccgc
     1621 cgtttactgg ggcttcgatc cgatgctctc acatcttcaa ttaaccttcc agcaccgggc
     1681 aggcgtcaca ccctatacgt ccactttcgt gttagcagag tgctgtgttt ttaataaaca
     1741 gtcgcagcca cctattctct gcgaccctcc ggggcttacg gagcaagtcc ttaaccttag
     1801 agggcatacc ttctcccgaa gttacggtat caatttgccg agttccttct cctgagttct
     1861 ctcaagcgcc ttagaattct catcctgccc acctgtgtcg gtttgcggta cggttcgatt
     1921 caaactgaag cttagtggct tttcctggaa gcgtggtatc ggttgcttcg tgtccgtaga
     1981 cactcgtcgt cacttctcgg tgttaagaag acccggattt gcctaagtct tccacctacc
     2041 ggcttaaaca agctattcca acagcttgcc aacctaacct tctccgtccc cacatcgcat
     2101 ttgaatcaag tacaggaata ttaacctgtt tcccatcgac tacgcatttc tgcctcgcct
     2161 taggggccga ctcaccctac gccgatgaac gttgcgcagg aaaccttggg ctttcggcga
     2221 gcgggctttt cacccgcttt atcgctactc atgtcaacat tcgcacttct gatacctcca
     2281 gcacacttta caatgcacct tcatcggcct acagaacgct cccctaccat gccgataaac
     2341 cggcatccgc agcttcggtt atagatttga gccccgttac atcttccgcg caggacgact
     2401 cgaccagtga gctattacgc tttctttaaa tgatggctgc ttctaagcca acatcctggc
     2461 tgtctgggcc ttcccacttc gtttaccact taatctatca ttggggacct tagctggcgg
     2521 tctgggttgt ttccctcttg acaacggacg ttagcacccg ctgtctgtct cccgaggaac
     2581 cacttgatgg tattctgagt ttgccatggg ttggtaagtt gcaataaccc cctagccata
     2641 acagtgcttt acccccatca gtgtcttgct cgaggcacta cctaaatagt tttcggggag
     2701 aaccagctat ctccgagttt gtttagcctt tcacccctat ccacagctca tccccgcatt
     2761 ttgcaacatg cgtgggttcg gtcctccagt acctgttacg gcaccttcaa cctggccatg
     2821 gatagatcac tcggtttcgg gtctacaccc agcaactcat cgccctatta agactcggtt
     2881 tccctacgcc tcccctattc ggttaagctc gctactgaat gtaagtcgtt gacccattat
     2941 acaaaaggta cgcagtcaca cctctagggc gctcccactg tttgtatgca tcaggtttca
     3001 ggttctgttt cactcccctc ccggggttct tttcgccttt ccctcacggt actggttcac
     3061 tatcggtcga tgatgagtat ttagccttgg aggatggtcc ccccatattc agacaggatt
     3121 tcacgtgtcc cgccctactt ttcgtacgct tagtaccgct gttgagattt cgaatacggg
     3181 actgtcaccc actatggtca agcttcccag cttgttcttc tatctcgaca gttattacgt
     3241 acaggctcct ccgcgttcgc tcgccactac ttgcggaatc tcggttgatt tcttttcctc
     3301 cgggtactta gatggttcag ttctccgggt tcgcttctct aagtctatgt attcaactta
     3361 ggatactgca cagaatgcag tgggtttccc cattcggaca tcgcggaatc attgctttat
     3421 tgccggctcc cccgcgcttt tcgcaggctt acacgtcctt cgtcgcctat catcgccaag
     3481 gcatccgcct gatgcactta ttcacttgac tctatcattt caagaacttc tttgactttg
     3541 cctaacattc cgttgactag aacatcagac ttgaatttcc tactttgata aagcttactg
     3601 ctttgttgtg tcttaatcct gccttttgtg tttcaggatt aagtcgatac aatcatcacc
     3661 caaatactgt gtttgttttc ttttctcttg tgagcgattt tttatccttt gcaaagaata
     3721 aaaaatcaaa acaaacgctt tgtctttgtt tgttgatttc ggctttccaa tttgttaaag
     3781 atcgatgcgt tcgatattgc tatctactgt gcaaatcaaa acgagctgat tattatatca
     3841 gcattttgtt cttggtcaag tgtgatgtcg ccctgaatgg attctgttcc attcttccgt
     3901 tttgatttgt acagtattgg tggaggcaaa cgggatcgaa ccgatgaccc cctgcttgca
     3961 aagcaggtgc tctaccaact gagctatgcc cccgttcttg gtgggtctgg gaggacttga
     4021 acctccgacc ccacgcttat caagcgtgtg ctctaaccag ctgagctaca aacccggatt
     4081 ctcttcttaa gcgaatcttg ccttcactca agcttcttcc gcatcttttc agtttaccga
     4141 taagtgtgaa tgcctaaagc ctcttctttc tctagaaagg aggtgatcca gccgcaggtt
     4201 cccctacggc taccttgtta cgacttcacc ccagtcatga agcataccgt ggtaagcgga
     4261 ctccttgcgg ttaccctacc tacttctggt atcccccact cccatggtgt gacgggcggt
     4321 gtgtacaaga cccgggaacg tattcaccgc agtatgctga cctgcgatta ctagcgattc
     4381 cgacttcatg cactcgagtt gcagagtgca atccggacta cgatcggttt tgtgagattg
     4441 gctccgcctc gcggcttggc taccctctgt accgaccatt gtatgacgtg tgaagccctg
     4501 gtcataaggg ccatgaggac ttgacgtcat ccccaccttc ctccggcttg tcaccggcag
     4561 tctcattaga gtgcccaact gaatgatggc aactaatgac aagggttgcg ctcgttgcgg
     4621 gacttaaccc aacatctcac gacacgagct gacgacagcc atgcagcacc tgtgttacgg
     4681 ctcccgaagg cactcctccg tctctggagg attccgtaca tgtcaagacc aggtaaggtt
     4741 cttcgcgttg catcgaatta atccacatca tccaccgctt gtgcgggtcc ccgtcaattc
     4801 ctttgagttt taatcttgcg accgtactcc ccaggcggtc aatttcacgc gttagctacg
     4861 ctactaagca atcaagttgc ccaacagcta attgacatcg tttagggcgt ggactaccag
     4921 ggtatctaat cctgtttgct acccacgctt tcgggcatga acgtcagtgt tgtcccagga
     4981 ggctgccttc gccatcggta ttcctccaca tctctacgca tttcactgct acacgtggaa
     5041 ttctacctcc ctctgacaca ctcgagtcac ccagttcaga acgcagttcc cgggttgagc
     5101 ccggggattt cacatcctgc ttaagtaacc gtctgcgccc gctttacgcc cagtaattcc
     5161 gattaacgct cgcaccctac gtattaccgc ggctgctggc acgtagttag ccggtgctta
     5221 ttcttcaggt accgtcatca gccgctgata ttagcaacag ccttttcttc cctgacaaaa
     5281 gtcctttaca acccgaaggc cttcttcaga cacgcggcat ggctggatca ggcttgcgcc
     5341 cattgtccaa aattccccac tgctgcctcc cgtaggagtc tgggccgtgt ctcagtccca
     5401 gtgtggcgga tcatcctctc agacccgcta ctgatcgtcg ccttggtagg cctttacccc
     5461 accaactagc taatcagata tcggccgctc gaatagcgca aggcccgaaa gtcccctgct
     5521 ttctctctca agacgtatgc ggtattagct gatctttcga tcagttatcc cccactactc
     5581 ggtacgttcc gatatgttac tcacccgttc gccactcgcc acccgagaag caagcttctc
     5641 tgtgctgccg tccgacttgc atgtgtaaag catgccgcca gcgttcaatc tgagccagga
     5701 tcaaactctt atgttcaatc tctaactttt taacttctgg tctgcttcaa agaaaccgac
     5761 aggacaatgt tcaaaacatt atcttgtctg tctttcaaac agtgtgaggc tcaaggcact
     5821 cacacttatc ggtaatctgt tttgttaaag agcgtttgaa ttataaagta tttcttccgc
     5881 ctgtcaagat atctctcgat atccccaaca ttctgtgcta tacttttcag ttcgtccgcc
     5941 gcttctgcag
//
LOCUS       DAWGKF010000125         5931 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.125, whole genome shotgun sequence.
ACCESSION   DAWGKF010000125 DAWGKF010000000
VERSION     DAWGKF010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5931)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5931)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5931
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.125"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            57..1595
                     /gene="murJ"
                     /locus_tag="WHR07_001617"
     CDS             57..1595
                     /gene="murJ"
                     /locus_tag="WHR07_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HEZ2130810.1"
                     /translation="MNMLGALAKVGSLTMVSRVLGFVRDTVIARAFGAGMATDAFFVA
                     FKLPNLLRRVFAEGAFAQAFVPILAEYKETRSKEATEAFIRHVAGMLSFVLVIVTALG
                     ILAAPWVIYVSAPGFAKDADKFQLSIDLLRITFPYILLISLSSFVGSVLNSYHKFSIP
                     AFTPTFLNVSFIVFALFFVPYFDPPVTALAWAVFVGGILQLGFQLPWLAKLGFLKLPK
                     LNFKDAAVNRVMKQMAPAILGVSVAQISLVINTIFASYLQSGSVSWMYYADRMMELPS
                     GVLGAALGTILLPTLSKHSANQDTEQFSALLDWGLRLCMLLTLPAAVGLAVLSFPLVA
                     TLFMYREFTLFDAQMTQHALIAYSFGLIGLIMIKVLASGFYARQNIKTPVKIAIFTLI
                     CTQLMNLAFIGPLKHVGLSLAIGLGACINAGLLFYLLRRHGIYQPGKGWAAFLAKMLL
                     SLAVMGGGLWAAQACLPFEWVRAGGMRKAGQLCILIAVGGGLYFASLAALGFRPRHFK
                     RVES"
     gene            1728..2684
                     /locus_tag="WHR07_001618"
     CDS             1728..2684
                     /locus_tag="WHR07_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEZ2130811.1"
                     /translation="MILTPPDTPFFLRNGNADTIAAKFLQRPAPAYRRELLPDSTGKT
                     KVAYDFSDGISPDAPLVVLFHGLEGSSGSHYAVELMLAVRDRGWNGAVVHFRSCGGIA
                     NTAPVFYHLGDTAEIAFTLDTLAARYREIYAVGVSLGGNALAKYLGERGENALPQAAA
                     VISAPVDAEAAGRRFDSGITRLLYTRYFLRTLIPKARSLHGFQTAFAAGCKTLGEFDD
                     RFTAPLHGFADRHDYYRQTSCKPLLKHVAKPLLLLNAANDPFLPPEALPTPDEVSEAV
                     TLFQPAHGGHAGFVGSTGGRLHLQWLPQTVLSYFDSFRTNRR"
     gene            2735..3517
                     /gene="trpC"
                     /locus_tag="WHR07_001619"
     CDS             2735..3517
                     /gene="trpC"
                     /locus_tag="WHR07_001619"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HEZ2130812.1"
                     /translation="MTDILNKILTAKAQEVAAQKAAVNAEHIRALAAEAAPVRSFIGS
                     IRGKHRLNLPAVIAEIKKASPSKGLIRPDFRPAEIARAYENAGAACLSVLTDEPYFQG
                     SPEYLKQAREAVSLPVLRKDFIIDEYQVYQARAWGADAVLLIAAALEQEQLERFEAVA
                     HELGMTVLLELHDESELEKCRNLTTPLWGVNNRNLRTFEVSLDQTLSLLPALEGKTVV
                     TESGITGKADVEFMQSRGVHTFLIGETFMRADNIEAEVGKLF"
     gene            3583..5883
                     /gene="recQ"
                     /locus_tag="WHR07_001620"
     CDS             3583..5883
                     /gene="recQ"
                     /locus_tag="WHR07_001620"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HEZ2130813.1"
                     /translation="MHRPTAKQILHEVFGYPEFRGRQEAVINTLAGGGSLTVLMPTGG
                     GKSLCYQIPALMREGVAVVVSPLIALMNDQVASLHVAGIEAAAVNSGTSADEAREIAD
                     KLAQGRLKLLYVAPERLVTDRFLRFLDQQTVSLFAIDEAHCVSQWGHDFRPEYQQLGM
                     LAERYPNVPRIALTATADAATRADIKHYLHLDDAPEFISSFDRPNIYYQVIEKNNGKK
                     QLLEFIRKEMAGQSGIVYCLSRKKVEDVAQFLRENGLNAIPYHAGLSMDVREENQRRF
                     THEDNIIVVATVAFGMGIDKPDVRFVAHLDMPQSVEHFYQESGRAGRDGLPAASWLCY
                     GLNDWVLLRERIAEGNSDEVQKQIEMQKLDAMLSVCETAACRRVLLLKHFGEESEPCG
                     HCDNCLHPPVRFDGTVLVQKLLSCVYRAGQRFAAGYITNLLRGKSDDWIRGNRHEQLS
                     TFGIGAELSDKEWRSVIRQCISLGYLTVNIARYQALQLTEAAKKVLKGETEVMLRPLK
                     RGKPAARTLKDNWLRTEREERLWQALRVWRMKQAEAEGIPAYMIFGDKTLRDLVEKMP
                     QNLNGLHDIYGLGEAKTERFGHGILEVCRNAAGFSRDAVIRPQTEREQQLRQKLEAWR
                     YEQARAENCALHAVLSDESLADMLADTPETETDLEGVHGLGSVRAAKYGRDILAVCRP
                     FSDGIDETAKHKRRLMRALIQWCNETAKHEQSEPYRILSKAALRAIAAKQPEGLAELA
                     AVYGVGEEKAARYGAAVLAVLERNAV"
BASE COUNT         1293 a         1763 c         1618 g         1257 t
ORIGIN      
        1 tcaaagtctg atcctgccgc cctaaagggc ggggtttcaa ccgaaaagga aatacgatga
       61 atatgctggg agctttggca aaagtcggca gcctgacgat ggtgtcgcgc gttttgggat
      121 ttgtgcgcga tacggtcatt gcgcgcgcat tcggcgcggg catggcgacg gatgcgtttt
      181 ttgtcgcgtt caaactgccc aacctgcttc gccgcgtgtt tgcggagggg gcgtttgccc
      241 aagcgtttgt gccgattttg gcggaatata aggaaacgcg ttctaaagag gcgacggagg
      301 cttttatccg ccatgtggcg gggatgctgt cgtttgtgct ggtcatcgtt accgcgctgg
      361 gcatacttgc cgcgccttgg gtgatttatg tttccgcacc cggttttgcc aaagatgccg
      421 acaaatttca gctctccatc gatttgctgc ggattacgtt cccctatatc ttattgattt
      481 cactttcctc ttttgtcggc tcggtactca attcctatca taaattcagc attccggcgt
      541 ttacgcccac gtttctgaac gtgtcgttta tcgtattcgc gctgtttttc gtgccatatt
      601 tcgatcctcc cgttaccgca ctggcatggg cggtttttgt cggcggcatt ttacaactcg
      661 gcttccaact gccctggctg gcgaaactgg gttttttgaa actgcccaaa ctgaatttca
      721 aagatgcggc ggtcaaccgc gtcatgaaac aaatggcacc tgcgattttg ggcgtgagcg
      781 tggcgcagat ttctttggtg atcaacacga ttttcgcgtc ttatctgcaa tcgggcagcg
      841 tttcatggat gtattacgcc gaccgcatga tggagctgcc cagcggcgtg ctgggggcgg
      901 cactcggtac gattttgctg ccgactttgt ccaaacactc ggcaaaccaa gatacggaac
      961 agttttccgc cctgctcgac tggggtttgc gcctgtgtat gctgctgacg ctgccggcgg
     1021 cggtcggact ggcggtgttg tcgttcccgc tggtggcaac cttgttcatg taccgcgaat
     1081 tcacgctgtt tgacgcgcag atgacgcaac atgcgctgat tgcctattct ttcggtttaa
     1141 tcggtttgat catgattaaa gtgttggcat ccggctttta tgcgcggcaa aacatcaaaa
     1201 cgcccgtcaa aatcgccatc ttcacgctca tctgcacgca gttgatgaac cttgccttta
     1261 tcggcccact gaaacacgtc ggactttcgc ttgccatcgg tctgggcgcg tgtatcaatg
     1321 ccggattgtt gttttacctg ttgcgcagac acggtattta ccaacctggc aagggttggg
     1381 cggcgttctt agcaaaaatg ctgctctcgc tcgccgtaat gggcggcgga ctgtgggcgg
     1441 cgcaggcttg cctgccgttt gaatgggtac gcgccggcgg aatgcggaaa gcggggcagc
     1501 tctgcatcct gattgccgtc ggcggcggac tgtatttcgc atctctggcg gctttgggct
     1561 tccgtccgcg ccatttcaaa cgggtggaaa gctgaccgat gccgatatcc tttttcggaa
     1621 aacgcttttt ccgcgcctat attcgggcgc gcatccccca cgtccgcacc agccggacgg
     1681 gctgccgcat catcaatgcc gtctgaaaac aagaaaaccg ataccttatg attttaacac
     1741 cgccggacac gccctttttc ctccgcaacg gcaatgccga cacgattgcc gccaaattcc
     1801 tgcaacgccc cgcacctgca taccgccgcg agctgcttcc agacagcacg ggtaaaacca
     1861 aagtcgccta cgacttttca gacggcattt cgcccgacgc accgctggtc gtgctgtttc
     1921 acggtttgga aggaagcagt ggcagccatt acgcggtcga actgatgctc gcggtacgcg
     1981 atcgcggttg gaacggcgca gtcgtccatt tccgcagctg cggcggcatt gccaacaccg
     2041 ctccggtgtt ctaccacttg ggcgataccg ccgaaatcgc ctttactttg gacacgcttg
     2101 ccgcgcgtta ccgtgaaata tacgccgtcg gcgtatcgct gggcggcaac gcgctggcaa
     2161 aatatttggg cgaacggggc gaaaacgcgc tgccgcaagc cgctgccgtc atctccgcac
     2221 ccgtcgatgc agaggcggca ggcagacgct tcgacagcgg catcacgcgg ctgctctaca
     2281 cgcgctactt cctccgcacc ctgataccca aagcacggtc gctccacggt tttcagacgg
     2341 catttgccgc agggtgcaaa acactgggcg agtttgacga ccgcttcacc gcaccgctgc
     2401 acggctttgc cgaccggcac gactactacc gccaaacttc ctgcaaaccg ctgctcaaac
     2461 acgttgccaa accgctgctc ctgctcaatg ccgccaacga ccccttcctg ccgcccgaag
     2521 cgctgccgac accggacgaa gtgtccgaag ccgttaccct gttccagccg gcacacggcg
     2581 gacacgccgg ctttgtcggc agcaccggcg gcaggctgca cctgcaatgg ctgccgcaga
     2641 ccgtcctgtc ctatttcgac agcttccgca caaacaggcg gtaacggttt gatgctaata
     2701 ttcccccttt ccccggacaa atacggaaca cgacatgacc gacatcctca ataaaatcct
     2761 taccgccaag gcacaggaag ttgccgctca aaaagccgcc gtcaacgccg aacacatccg
     2821 cgcacttgcc gcagaagccg cgcccgtccg cagcttcatc ggttcgatac gcggcaaaca
     2881 ccgcctaaac ctgcccgccg tcattgccga aatcaaaaag gcaagcccga gcaaaggcct
     2941 gatccgtccg gacttccgac cggccgagat tgcacgcgcc tatgaaaacg ccggggcggc
     3001 gtgtttgtcc gtactgaccg acgaacccta tttccaaggt tcgcccgaat acctcaaaca
     3061 ggcgcgcgaa gccgtatcgc tgcccgtgct gcgcaaagac ttcatcatcg acgaatatca
     3121 ggtttatcag gcgcgcgcat ggggggcgga tgccgtcctg ctgattgccg cagcactgga
     3181 acaggaacaa ttggaacgct ttgaagcggt ggcgcacgaa ttgggcatga ccgtcctgct
     3241 cgagctgcac gatgaaagcg aattggaaaa atgccgcaac ctgaccacgc cgttgtgggg
     3301 tgtaaacaac cgcaacctga ggacttttga agtctccctc gaccaaaccc tgtcgctgct
     3361 gcccgcgctg gaaggcaaaa ccgtcgttac cgaaagcggc attacaggca aggcggatgt
     3421 ggaatttatg caatcgcgcg gcgtgcatac cttcctgatc ggcgaaacgt ttatgcgtgc
     3481 cgacaatatt gaggcggaag taggcaaact cttctaaatc ccgatttcag acggcattcc
     3541 ctttctttaa ccgacacacc ctttaccgga cacggaacca tcatgcaccg accgaccgcc
     3601 aaacagattc tgcacgaagt atttggttat cccgaatttc gcggcaggca ggaggctgtc
     3661 atcaatactt tggcaggcgg cgggagtttg acggtgctga tgccgacggg cgggggcaag
     3721 tctttgtgtt accagattcc cgcgctgatg cgcgaaggcg tggcggttgt cgtatcgccg
     3781 ctgattgcgc tgatgaacga ccaagtggcc agcctgcatg tggccgggat tgaagcagcg
     3841 gcagtcaaca gcggcacatc ggcagatgag gcgcgcgaga ttgccgacaa gcttgcccaa
     3901 ggccgtctga aactgcttta tgtcgcgccg gaacgcttgg ttaccgatcg ctttttgcgt
     3961 tttctcgacc aacaaaccgt cagcctgttt gccattgatg aggcgcattg cgtcagccag
     4021 tggggacacg atttccgccc cgaataccaa cagctcggca tgcttgccga acgctatccg
     4081 aacgtcccgc gcatcgccct gaccgccacc gccgatgccg ccacgcgcgc cgacatcaag
     4141 cattatctgc acttggacga tgcgcccgaa tttatttcca gcttcgaccg cccgaatatt
     4201 tattatcagg ttatcgaaaa aaacaacggc aaaaaacaac tgcttgaatt tatccgcaaa
     4261 gaaatggcgg ggcaaagcgg cattgtgtat tgcctaagcc gcaaaaaggt tgaagatgtg
     4321 gcgcagtttt tgcgtgaaaa cggattaaac gcgattccgt atcatgctgg tttgagcatg
     4381 gacgtgcgcg aggaaaacca acgccgcttt acgcatgaag acaatattat cgtggtggcg
     4441 accgtggcgt tcggcatggg catagacaaa cccgacgtgc gctttgtcgc ccatctcgat
     4501 atgccccaga gtgtcgaaca tttctatcag gaatcggggc gtgccggcag ggacgggctg
     4561 cctgccgcga gctggctgtg ttacggcttg aacgattggg tgttgctgcg cgaacggatt
     4621 gccgaaggca acagcgatga ggtgcaaaag caaatcgaaa tgcaaaaact cgatgccatg
     4681 ctttccgtct gcgaaaccgc cgcctgccgc cgcgtactgt tgctcaaaca ttttggcgaa
     4741 gaatccgaac cctgcggcca ttgcgacaac tgcctgcatc cgcctgtgcg gtttgacggc
     4801 acggtgttgg tacaaaaatt actcagctgc gtgtaccgcg ccggacaacg ttttgccgcc
     4861 ggttacatca ccaacctttt gcgcggtaaa agcgacgatt ggatacgcgg caaccggcac
     4921 gaacaactgt ctaccttcgg catcggtgcg gagttgtccg acaaagaatg gcgcagcgtc
     4981 atccgccagt gcatcagcct cggctacctc accgtcaaca ttgcccgata tcaggcattg
     5041 caactgaccg aagccgccaa aaaagtcctc aaaggcgaaa ccgaagtgat gctgcgtccg
     5101 ctcaagcgcg gcaagcccgc cgcccgcacc ctcaaagaca actggctgcg taccgaacgc
     5161 gaagaacgcc tgtggcaggc attgcgcgtt tggcgtatga aacaggcaga agccgaaggc
     5221 atccccgcct atatgatttt cggcgacaaa accctgcgcg accttgtcga aaaaatgccg
     5281 caaaacctca acgggctgca cgacatctac ggcttgggcg aagccaaaac cgaacgtttc
     5341 ggacacggca tactcgaagt ctgccgcaac gccgccggct tcagccgcga cgcggtcatc
     5401 cgtccgcaaa ccgaacgcga acaacaactg cgtcaaaaac tcgaggcctg gcggtatgaa
     5461 caggcaaggg cggaaaactg cgccctgcat gccgtcctct ccgacgaaag ccttgccgat
     5521 atgcttgccg atacgcccga aaccgaaacc gacctcgaag gcgtacacgg cttgggcagc
     5581 gtacgcgccg ccaaatacgg acgggacatc ctcgccgtct gccgtccgtt ttcagacggc
     5641 atcgatgaaa ccgccaaaca caaacgccgc ctgatgcgcg ccctgatcca atggtgcaac
     5701 gaaacggcaa aacacgaaca gtccgaaccc taccgcattc tcagcaaagc cgccctacgc
     5761 gccattgccg ccaaacagcc ggaaggtttg gcggagcttg ccgccgtata tggcgtaggc
     5821 gaagaaaaag ccgcacgtta cggtgcggcg gtgttggcgg tattggaacg aaatgccgtc
     5881 tgaaaaccgt taccaagttt cagacggcat tgcctctatt taaaaattcc t
//
LOCUS       DAWGKF010000126         5791 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.126, whole genome shotgun sequence.
ACCESSION   DAWGKF010000126 DAWGKF010000000
VERSION     DAWGKF010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5791)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5791)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5791
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.126"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..225)
                     /locus_tag="WHR07_001621"
     CDS             complement(<1..225)
                     /locus_tag="WHR07_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225727.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
                     /protein_id="HEZ2130814.1"
                     /translation="MNLPIQKFMMLFAAAISLLQIPISHANGLDARLRDDMQAKHYEP
                     GGKYHLFGNARGSVKKRVYAVQTFDATAVGP"
     gene            complement(265..1227)
                     /gene="mafA"
                     /locus_tag="WHR07_001622"
     CDS             complement(265..1227)
                     /gene="mafA"
                     /locus_tag="WHR07_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HEZ2130815.1"
                     /translation="MQARLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAAS
                     ARAAVKDMDLQALHGRKVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDY
                     TYPRYETTAETTSGGLTGLTTSLSTLNAPALSRTQSDGSGSKSSLGLNIGGMGDYRNE
                     TLTTNPRDTAFLSHLVQTVFFLRGIDVVSPANADTDVFINIDVFGTIRNRTEMHLYNA
                     ETLKAQTKLEYFAVDRTNKKLLIKPKTNAFEAAYKENYALWMGPYKVSKGIKPTEGLM
                     VDFSDIRPYGNHTGNSAPSVETDNSHEGYGYSDEVVRQHRQGQP"
     gene            complement(1411..2130)
                     /locus_tag="WHR07_001623"
     CDS             complement(1411..2130)
                     /locus_tag="WHR07_001623"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEZ2130816.1"
                     /translation="MTQQIKYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVK
                     MGVQVGIVVGGGNIFRGVSAQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARV
                     QSALSMQQIAETYARPKAIQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVML
                     KATNVDGVYTADPKKDSSATRYETITFDEALLKNLKVMDATAFALCRERKLNIVVFGI
                     AKEGSLKRVVTGENEGTLVHC"
     gene            complement(2347..3201)
                     /locus_tag="WHR07_001624"
     CDS             complement(2347..3201)
                     /locus_tag="WHR07_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HEZ2130817.1"
                     /translation="MAEITAKMVADLRAATGLGMMECKKALVEAEGNFDKAEEILRIK
                     SGAKAGKLAGRTAAEGVLAYAINGNVGALVEVNCETDFVAKDAGFVEFANFVAKTAAE
                     KKPASVEELSELVEAERKAIIAKLGENMSVRRFQVIDTANQLVAYIHGALATEGVLVE
                     YKGSEDVARKIGMHIVAAKPQCVSEAEVDAETVEKERHIYTEQAIASGKPADIAAKMV
                     EGRIRKFLAEITLNGQAFVMNPDQTVAQFAKENGTEVVSFVRYKVGDGIEKAVVDYAA
                     EVAAAAKV"
     gene            complement(3330..4058)
                     /gene="rpsB"
                     /locus_tag="WHR07_001625"
     CDS             complement(3330..4058)
                     /gene="rpsB"
                     /locus_tag="WHR07_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEZ2130818.1"
                     /translation="MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLE
                     KTLPMFQDAQEAVRRLVANKGTVLFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLT
                     NYKTVKQSIKRLEEKTAALENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDA
                     IFVIDTGYQKGTLVEAEKLGIPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIA
                     DAVLEGKNQALQETVAAAQEAAAE"
     gene            complement(4259..4468)
                     /locus_tag="WHR07_001626"
     CDS             complement(4259..4468)
                     /locus_tag="WHR07_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130819.1"
                     /translation="MWHIVAIGYLFVAVMFSAAQPSIARTLIYLVFWAVLPTVFTVFV
                     VTIRRRNRLMKQQEQAEFEQQRAQR"
     gene            4546..5127
                     /locus_tag="WHR07_001627"
     CDS             4546..5127
                     /locus_tag="WHR07_001627"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEZ2130820.1"
                     /translation="MRNEEKHALRRELRGRRSQMGWDVRAAATVKINRLLKRYIKHGR
                     KIGVYWPMGKELRLDGFVRAAQKRGAKLYLPYIEPRSRRMWFTPYPESGMERERIRGR
                     ARLNVPQFAGRKIRVHGLSVLLVPLVGIDREGYRLGQAGGYYDATLAAMKYRLQAKTV
                     GVGFACQLVDRLSVEAHDLPLDGFVSEAGILCF"
     gene            5188..5778
                     /locus_tag="WHR07_001628"
     CDS             5188..5778
                     /locus_tag="WHR07_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ2130821.1"
                     /translation="MSERIILPVLSLGGVRLEPLDVHHEMGLREAVCDGEVWKLGVTS
                     APHPDRVADYIGTALATRLAFAVVDEEAGRVVGTTAYYHFEPQIPRLDIGFTWYAASA
                     RRTRINTCCKIMLLDYAFDVLACRCVGWRTDILNLASQRAIERLGAEKDGVLRMHMLR
                     KDGSVRDTVVYSMLREDWCKNREILTGRLAGYGVQV"
BASE COUNT         1297 a         1324 c         1603 g         1567 t
ORIGIN      
        1 ggggccgacc gcagttgcat caaatgtctg gacggcgtaa acccgctttt taacactgcc
       61 gcgagcatta ccaaacagat ggtatttacc acccggttcg tagtgttttg cctgcatatc
      121 atcgcgcaaa cgggcatcca aaccgttcgc atgactaatg gggatttgca gcaacgatat
      181 tgctgctgca aacagcatca tgaatttttg aataggcaaa ttcattttgt tttccttggt
      241 agcaagcggt tatggtagtg tgaatcaagg ttgcccttgt ctatgttgtc gcactacttc
      301 atcgctgtat ccatacccct catgactgtt atcagtctct acggatgggg cggagttacc
      361 cgtatgattg ccgtatggtc ggatatcgga gaaatcgacc attaatcctt ccgtcggttt
      421 aattcctttg cttactttat acggccccat ccacaatgcg taattttctt tataggcagc
      481 ttcaaacgca ttggttttgg gtttgatgag caatttttta ttggttctgt ctactgcgaa
      541 atattccagt tttgtttggg ctttcagtgt ttcggcattg tataggtgca tttcggttct
      601 gttgcgtatc gttccgaata cgtcgatgtt aataaacaca tctgtatcgg cattggcagg
      661 agaaacaacg tctatgccgc gcaggaaaaa tacggtctgt accaagtggg aaagaaaggc
      721 agtgtcgcgc gggttagtcg tcaaggtttc atttcgataa tcccccatcc cgccaatatt
      781 taagcccaga ctgcttttac ttccgctacc gtctgattgg gtgcgagaga gtgcaggggc
      841 attaagtgta gataaagaag tggttaaacc tgtcaaaccg cctgatgttg tttcagcggt
      901 ggtttcgtaa cgtggatagg tgtaatcggt acggacggca gggctgttta tgtattcgcc
      961 acgaatcagt gcatcaatgg agtagcgacc ccctgtcaaa ctgcctgaac cttggtcgcc
     1021 catagttgca atgtacaatg caacttttcg tccgtgtaat gcctgtaaat ccatgtcttt
     1081 aacggcagct ctggcagaag cggccacaag ttcttgttcg accgcaaagc gtttacctcc
     1141 gccatgcgat ggaatacctg tcagtgtccc gcaggcggat aaaataaaaa ctgaaaaaag
     1201 aataggtatc agcagccgtg cttgcataga ttttctcctt tgatgaaaaa caaattgtat
     1261 caaaattgta aatatagtgg attaaattta aaccagtacg gcaaggcgag gcaacgccgt
     1321 actggtttaa atttaatcca ctataatctc catataataa atggctgtct gaagcccata
     1381 tgcgactata tctgccgaca ctatggtcaa tcagcagtga accagcgtac cttcgttttc
     1441 accggttact acacgtttga gcgagccttc tttagcaatg ccgaatacga caatattgag
     1501 cttgcgttcg cggcagaggg cgaaagcggt ggcatccatc actttgaggt ttttcaacaa
     1561 ggcttcgtca aaagtaatgg tttcgtagcg cgtggcggat gagtcttttt tggggtctgc
     1621 ggtgtacacg ccgtcaacgt tggtggcttt gagcatcacg tcgcagttca tttccgcacc
     1681 gcgcaatgcg gcggcagtgt cggtcgtgaa gaacgggtta ccggtaccgg cggcaaaaat
     1741 cacgactttg ccttcttcca aatattggat ggctttgggg cgggcgtagg tttcagcgat
     1801 ttgctgcata gacagtgcgg attgtacgcg cgctttgatg cctaaagttt caaatgcgtc
     1861 tttgagtgcc aacgcgttca tcacggtcgc catcatgccc atgtagtcgg cggtggcgcg
     1921 atccatgctg cctgcttggg cggatacgcc ccggaaaata ttgccgccgc cgacaacaat
     1981 accgacttgc acgcccattt taacgacttc ggcaatttcg ccgacagttt gaacgatggt
     2041 atcgtgattg atgccgaacg gatcggaacc catcagggat tcgccggaga gtttcagtaa
     2101 tacgcgtttg tatttgattt gctgtgtcat ggataccttg ctttcttgaa tgtcgtcggt
     2161 cggagttggg tcgtctgaat ttcaaacggt cggaatatta atgatagggt gtgtcggttt
     2221 attattgttt tgttttaaga cggtctgaat attcggtcgt cttaaaatag gtaccgcaaa
     2281 cggttttctc aaaaaaaagc accctgattc gtttggaatc caggtgcttt ctttttcata
     2341 agtgccttac actttggcgg ctgcggctac ttcggctgcg tagtcgacaa cggctttctc
     2401 gataccgtcg cctactttgt agcggacgaa gctgaccact tcagtgccgt tttctttggc
     2461 gaattgggca acagtttgat cggggttcat cacgaatgct tggccgttca gagtgatttc
     2521 agccaagaat ttgcgaatac ggccttcaac cattttagcg gcgatgtcgg caggtttgcc
     2581 ggaagcgatg gcttgttcgg tgtagatgtg gcgttctttt tcaacggttt cggcatctac
     2641 ttcggcttcg cttacgcatt gtggtttagc ggcaacaatg tgcataccga ttttgcgtgc
     2701 tacgtcttca gagcctttgt actcaaccaa tacgccttcg gtcgccaatg cgccgtggat
     2761 gtaggcaacc agttggttgg cagtgtcgat cacttggaag cgacggacag acatgttctc
     2821 gcccaatttg gcgatgatgg ctttgcgttc tgcttcaacc agttcgctca gttcttcaac
     2881 agaagccggt tttttctcgg cggcagtttt cgcaacgaag ttggcaaatt ctacgaagcc
     2941 cgcgtcttta gcaacgaagt cggtttcgca gtttacttcg accaatgcgc cgacattgcc
     3001 gttgatcgcg taagccaata cgccttcggc agcagtacgg ccagccagtt taccggcttt
     3061 cgcaccagat ttaatacgca ggatttcttc ggctttgtcg aagttgcctt cggcttcaac
     3121 caaggctttt ttgcattcca tcatgcccag gccggtagca gcgcgcaggt cggcaaccat
     3181 ttttgcagta atttctgcca ttttgaatct cctagatttt tgggaaatac ggaaaggatt
     3241 ttccgcattc gggaatcgtg tgccgcgaac ggacgttcag acggcatatt tgagaaaagg
     3301 ggcataacgc ccctcttcgg tttgccggat tactcggcag cggcttcttg ggcagcggct
     3361 acggtttctt gcagcgcttg gtttttgcct tccaaaactg cgtcagcgat gccgcggcag
     3421 tacaggcgga tggctttggc ggagtcgtcg ttgccgggga tgacgtattt cacgccgtca
     3481 gggctgttgt tggtatcgac tacggcgata acggggatgc ccagtttttc agcctcgacc
     3541 agagtacctt tttggtagcc ggtatcgata acgaaaatcg cgtcgggcag gcctttcatg
     3601 tttttgatac cgcccaaaga acgttccagt ttttcaacat cgcgttgcat ttccagaatt
     3661 tcttttttgc tgaaaccgct ttcggcagca ttttccaagg ctgcggtttt ttcttccagg
     3721 cgtttgatgg attgcttaac ggttttgtag ttggtcagca taccgcccaa ccaacggtga
     3781 tcgacgaaag gcatgccggc gcgggtcgct tcttcgcgga tgatgtcgcg ggcttggcgt
     3841 ttggtaccta cgaacaatac tgtacctttg ttggcaacca gacgacgtac ggcttcttgc
     3901 gcgtcttgga acatcggcag ggttttttcc aggttgacga tatggatttt gttgcgcgca
     3961 ccgaaaatgt attgagccat tttcgggttc cagaaacggg tttggtggcc gaagtggaca
     4021 ccggcttcaa tcatctgacg catagtaatt tgagacattt tgatttcctt gaaagggtta
     4081 agggcacaca ttcaatcgca tagaacttga tagaccgcgc ctattgtcaa gcacccttcg
     4141 gcgaaagtgg gcataagttt taaaaaataa aagagtgttt ccgaaatgga aaactgacgg
     4201 attatagcgg ataagaggtc gtctgaaaag ggattcaggg ttttgtgccg ctgtcttttt
     4261 accgttgtgc acgctgctgt tcgaattctg cctgttcctg ttgcttcatc aggcggttgc
     4321 ggcggcggat ggtcacgaca aagaccgtga acacggtggg cagcaccgcc caaaaaacca
     4381 aataaatcaa ggtgcgcgca atactcggct gcgcggcgga aaacatcacg gcaacaaaaa
     4441 gatagccgat ggcgacaatg tgccacattg tgtgcgtcct gtttgaatgt taacaaaatc
     4501 gttataatcg caacattcta ccgcaatcct gaaaggccgt ctgaaatgag gaacgaggaa
     4561 aaacacgccc tgcgccgcga attacgcggg cggcgttcgc aaatggggtg ggacgtgcgg
     4621 gcggcggcaa cggtaaaaat taaccgcctg ctcaaacgtt atatcaagca cggtcggaaa
     4681 atcggcgtgt attggccgat gggcaaggaa ttgcgtttgg acggctttgt ccgcgcggcg
     4741 caaaaacgcg gcgcaaaact ttatctgcct tatatcgaac cgcgttcgcg gcggatgtgg
     4801 tttacgccgt atcctgaaag cggaatggaa cgggagcgca tacggggcag ggcgaggttg
     4861 aacgtgccgc agtttgcagg gcgcaaaatc cgcgtgcacg gtttgtcggt attgctcgtt
     4921 ccgcttgtcg gcatagaccg cgaaggctac cgtttggggc aggcaggcgg ctattacgat
     4981 gcgacgcttg cagcgatgaa ataccgtttg caggcaaaaa ccgtgggcgt gggctttgcc
     5041 tgccagttgg tggacagact gtcggtcgag gcgcacgacc tgccgctgga cggttttgtg
     5101 tcggaggcgg ggatattgtg tttttagccg ttcagacggc attttgaacg gaaatgccgt
     5161 ctgaaggcgg aatattggga gaaaaggatg tcggaaagga taatactgcc ggtcttgtcg
     5221 ttgggcggcg ttcgtctcga accgttggat gtgcatcatg aaatgggttt gcgcgaggcg
     5281 gtttgcgatg gggaagtttg gaagctggga gtaacgtccg cgccccatcc ggatagggtg
     5341 gcagactata tcgggacagc attggcaacg cgtttggcgt ttgcggttgt cgatgaagag
     5401 gcgggcaggg tggtcgggac aacggcgtat tatcattttg aaccgcagat tccgcgtttg
     5461 gatatcggat tcacatggta tgcggcatcg gcacggcgga cacggataaa cacctgttgc
     5521 aaaatcatgc tgttggatta cgcatttgat gttttggctt gccgttgcgt gggatggcgc
     5581 acggatattc tgaaccttgc ctcgcaacgt gccatcgaac ggctgggtgc ggaaaaagac
     5641 ggcgtgctgc gtatgcatat gctccgtaaa gacggcagtg tgcgcgatac ggtcgtgtac
     5701 agtatgctga gggaagattg gtgcaaaaac agggaaatcc tgaccggcag gttggcaggg
     5761 tatggcgtgc aggtgtgagg cagtattttc a
//
LOCUS       DAWGKF010000127         5746 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.127, whole genome shotgun sequence.
ACCESSION   DAWGKF010000127 DAWGKF010000000
VERSION     DAWGKF010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5746
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.127"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(238..2370)
                     /locus_tag="WHR07_001629"
     CDS             complement(238..2370)
                     /locus_tag="WHR07_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HEZ2130822.1"
                     /translation="MSIVSAPLPALSALIILAHYHGIAANPADIQHEFCTSAQSDLNE
                     TQWLLAAKSLGLKAKVVRQPIKRLAMATLPALVWCDDGNHFILAKTDGEGEHAQFLIQ
                     DLVTNKSAVLSFAEFSNRYSGKLILVASRASVLGSLAKFDFTWFIPAVIKYRRLFFEV
                     LVVSVVLQLFALITPLFFQVVMDKVLVHRGFSTLDVVSVALLVVSLFEIVLGGLRTYL
                     FAHTTSRIDVELGARLFRHLLSLPLSYFEHRRVGDTVARVRELEQIRNFLTGQALTSV
                     LDLAFSFIFLAVMWYYSSTLTWVVLASLPAYAFWSAFISPILRTRLNDKFARNADNQS
                     FLVESITAVGTVKAMAVEPQMTQRWDNQLAAYVASGFRVTKLAVVGQQGVQLIQKLVT
                     VATLWIGARLVIEGKLTVGQLIAFNMLSGQVAAPVIRLAQLWQDFQQVGISVARLGDI
                     LNAPTENASSHLALPDIRGEITFEHVDFRYKADGRLILQDLNLRIRAGEVLGIVGRSG
                     SGKSTLTKLVQRLYVPEQGRVLVDGNDLALAAPAWLRRQVGVVLQENVLLNRSIRDNI
                     ALTDTGMPLERIIEAAKLAGAHEFIMELPEGYGTVVGEQGAGLSGGQRQRIAIARALI
                     TNPRILIFDEATSALDYESERAIMQNMQAICANRTVLIIAHRLSTVKTAHRIIAMDKG
                     RIVEAGTQQELLAKPNGYYRYLYDLQNG"
     gene            complement(3170..3823)
                     /locus_tag="WHR07_001630"
     CDS             complement(3170..3823)
                     /locus_tag="WHR07_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ2130823.1"
                     /translation="MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAVLFY
                     RKIRMVISHYPALAADEVFEGSVELDESYFGGRRKGRRGRGAAGKVVVFGILKRNGRV
                     YTVVVDNARSETLLPVIKRKIMPDSIVYTDSLSSYDKLHVSGFIHHRINHSKEFADRQ
                     NHINGIENFWNQAKRALRKYNEIDRKSFPLFLKECKFRFNFGTPSRQLKILRDWCGI"
     gene            4160..4594
                     /locus_tag="WHR07_001631"
     CDS             4160..4594
                     /locus_tag="WHR07_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130824.1"
                     /translation="MDNKKEFINNLTNRYMWIYPLVLNILFLPFYQSYQSFFIALGCL
                     FALVRKMQSLDFKLQNHIVLLNIKSAWADKKVFLIRIVVSWLAVMEIWMCFISESSTW
                     VCGAFCLNSEILEKIFRGFGYSGSLYFLFILMIDLNKLRESI"
     gene            4870..5589
                     /locus_tag="WHR07_001632"
     CDS             4870..5589
                     /locus_tag="WHR07_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130825.1"
                     /translation="MKNKNYLLVFIVLHIALIVINIVFGYFVFLFDFFAFLFFANVFL
                     AVNLLFLEKNIKNKLLFLLPISIIIWMVIHISMINIKFYKFEHQIKEQNISSITGVIK
                     PHDSYNYVYDSNGYAKLKDNHRYGRVIRETPYIDVVASDVKNKSIRLSLVCGIHSYAP
                     CANFIKFAKKPVKIYFYNQPQGDFIDNVIFEINDGNKSLYLLDKYKTFFLIENSVCIV
                     LIILYLKFNLLLYRTYFNELE"
BASE COUNT         1758 a         1231 c         1179 g         1578 t
ORIGIN      
        1 aagaaggtgc tcatgagaaa tcccctaaat gtcttggtgg gaatttaggg gattttgggg
       61 aattttgcaa aggtctctag atgagtgaaa aagaagtgca ggctgcctaa aaagacagaa
      121 aaagtctttc cggcagcctg cactttggtt tcatttcagt cagtaaaccc agtaaacgac
      181 ggtctgaaaa cgcagaacgt tacgaaaaaa gcagcctaca cgcccatccc ccgccttcta
      241 cccgttctgt aaatcataca gatagcggta atatccgttc ggcttcgcca gcaattcctg
      301 ctgtgttccc gcttccacaa tcctgccttt atccatggca atgatccggt gtgccgtttt
      361 aacagtggac agacggtggg cgataatcag caccgtccgg ttggcgcaaa tggcctgcat
      421 gttctgcata atcgctcgtt cactttcata atccagcgcg ctggtggctt catcaaaaat
      481 cagaatgcgc ggattggtga ttaacgcgcg ggcaatcgca atacgctgcc gctgtccgcc
      541 cgacaagccg gccccttgtt cgcccaccac ggtgccgtag ccttccggca gctccataat
      601 aaactcgtgt gcgcccgcca gtttggctgc ttcgataatg cgttccagcg gcatacccgt
      661 atccgtcagc gcgatattgt cgcgtatgct gcggttgagc agcacattct cctgcaagac
      721 cacgccgacc tgccgccgca gccaggcagg agcggccaaa gccaaatcgt tgccgtccac
      781 caacacccgt ccctgctccg gtacatacag acgctgcacc aatttggtga gtgtggattt
      841 gcccgacccc gaacgtccca caatccccag cacttccccc gcccgaatcc gcaggttcaa
      901 atcctgcaaa atcagcctgc cgtccgcctt atagcggaaa tcgacatgtt cgaacgtaat
      961 ctccccccgg atatcgggca aagccaaatg cgaagacgca ttctcggtcg gcgcattcag
     1021 aatatccccc aaacgcgcca ccgaaatccc cacctgctgg aaatcctgcc acaactgcgc
     1081 caaacggata acaggcgccg ccacctgtcc cgagagcata ttaaacgcaa tcagctgccc
     1141 caccgtcagc ttgccctcaa ttaccagccg tgcgccaatc cacaacgtcg ccaccgtcac
     1201 cagcttctga atcagctgca ccccctgctg gccgaccacc gccaacttcg ttacccgaaa
     1261 tcccgaagcc acataagccg ccaactgatt gtcccaacgc tgcgtcatct gcggctccac
     1321 cgccatcgcc tttaccgtac ccaccgcagt gatgctttct actaaaaacg actggttgtc
     1381 tgcattgcgc gcgaacttat cgttcagacg cgtccgcagt atcggactga taaatgccga
     1441 ccaaaacgca taggcaggca acgaagccaa taccacccaa gtcagagtgg agctgtaata
     1501 ccacatcacc gccagaaaga taaacgaaaa cgccaaatcc aacaccgaag tcagcgcctg
     1561 accggtcaag aaattgcgaa tctgctccaa ttcccgcacc cgagccaccg tatcacccac
     1621 tcgtctgtgc tcgaaatagg ataaaggcag ggaaagcaga tgccggaaca aacgcgcgcc
     1681 caattccaca tcaatacgtg aagtcgtatg tgcaaacaga tacgtccgca aaccgcccaa
     1741 cacaatctca aacagcgaca ccaccaacaa agccaccgac accacatcca aagtagagaa
     1801 tccccgatgt accagcacct tgtccatcac cacttggaaa aacagaggcg taatcagcgc
     1861 aaacagctgc aacaccaccg acaccaccaa tacttcaaaa aacaaccggc ggtatttgat
     1921 taccgccgga ataaaccagg taaagtcaaa ctttgccaaa ctgcccaata ccgaagcgcg
     1981 ggaagcaacc aatatcagtt tgcccgaata tctgttagaa aattcggcaa aagacaatac
     2041 cgcagactta ttcgtaacca aatcctgtat caaaaattgg gcatgctcac cctcaccgtc
     2101 tgttttggcc aaaatgaaat ggttgccgtc atcacaccat accaatgcgg gtaaagtcgc
     2161 catagccaaa cgtttaatag gctggcggac tacctttgcc ttcaatccca aagatttggc
     2221 ggctaacagc cattgcgttt catttaaatc gctctgtgcg gaagtacaaa attcatgctg
     2281 tatatcggca ggattggcgg caatgccgtg gtaatgggcg aggatgatga gggcggaaag
     2341 ggcggggagc ggtgcagata cgatagacat aaataaaata tagttagatt ggatgtggat
     2401 aacggctggc tggaaaagga atatattaag tagaaagaaa tatataaata aaacagcaga
     2461 acgcattgta aggatatata tgggaattgt aaagagaaag tatggaaaag ttctcgtttc
     2521 aggaaggtaa aacggcttag gaatcgagtt agatgaggat gcctcgcacc tctcgtgcct
     2581 cctgcatacc gttaaggcac agggttaagg tgcaggctgc tccgaactct gttgcggtcg
     2641 ggtaatgtta ttttttgtgt ttcaggcagc ctgaaatatc tgtatatttt tgttttaaat
     2701 agattttaaa gattgataac tgttcttgac gatttttcaa gaaaggagta aatttcaaga
     2761 aaggagtaaa gtgacttatt atcaatgaca agcaacgcgc gaagtgacaa ggaaaactat
     2821 ctacttaaat tctaaggagg cttcgaatat cataaaccaa tcagaaacat agagataaaa
     2881 attatgtaca aatataatcc tcttatacaa tttattgcac agttgattat gtcttatgga
     2941 gcaagcgtag ggtgggcact tgctgcccac gcgtttcata tttcaaggca gcctgaaact
     3001 gtgtgggcat aatgcctacc ctacatccca aaaaaacaag cgcagcctgc gtgtgtaggg
     3061 tgcgaacttt cggcaggcag acacgcggtt ttatagtttc aagctgagtt gggatgctta
     3121 agataaagta caaaacctta aaaaataagg gggctgtact agattagccc taaattccac
     3181 accaatcccg caaaattttt agctgtcggg acggtgtgcc gaagttaaac cgaaatttgc
     3241 attctttcaa gaacagcggg aaagatttac gatcaatttc gttgtatttg cgcaaggcgc
     3301 gtttcgcctg attccaaaag ttttcaatgc cgttaatgtg gttctgacgg tctgcaaact
     3361 ccttagaatg gttgatgcgg tgatggataa aaccgcttac gtgcagcttg tcatagctgc
     3421 tcagactatc ggtataaaca atactgtccg gcatgatttt ccttttgatg acagggagta
     3481 acgtttcaga cctggcatta tctacaacaa cggtatagac ccgtccgttg cgtttcagaa
     3541 tgccgaagac aaccactttt cctgccgcac cgcgaccgcg tctgccttta cgccgtccgc
     3601 cgaaatagct ttcgtccaac tcgacagagc cctcaaaaac ctcatcggca gccaaggccg
     3661 gataatggct gatgaccata cggattttgc ggtagaacag gactgccgaa ttgggatgga
     3721 tacccaaaat atcggcagca gaacgggcgg taacttcgag tacaaaaaaa cggagcagct
     3781 ctttctgtac ttttttcttt aatttgcagt gtgttatctt catatttcgg gggtaacata
     3841 tctgctaatc tagtacagcc tcaaacaaaa aagagaaatt ttaatttcgc taaatcgcat
     3901 aaagattaat caagagtatc attaaatgat atgagtgagc atctataatg ccaagaagag
     3961 ttgttaagac ataacgatta ttgaaataga ttgtaaaata gatacttaga tagtctgaaa
     4021 aacggatttg tgaaactttt tattacgcgc catcatttga aaatgaaact taaaaaacac
     4081 ttatcataat aaatattttc tttacgttgt ttgctaataa actcagtgca atatcagcgc
     4141 aatattttat ggaaatttta tggataacaa aaaagaattt attaataatt taacaaatag
     4201 gtatatgtgg atctatccat tggtcttaaa tattctattt ctaccttttt accagtccta
     4261 ccaatctttt tttattgcgc ttggttgttt gtttgcactg gttagaaaaa tgcaaagctt
     4321 agattttaaa ttacaaaatc atattgtatt gttaaatata aaaagtgctt gggcagataa
     4381 aaaagtattt ttgattagga tagtagtgtc atggttggca gtaatggaaa tatggatgtg
     4441 ttttatttcg gaatcatcaa cgtgggtatg cggtgctttt tgtttaaata gtgaaatatt
     4501 ggaaaaaatt tttcgtggct ttggttattc tggtagttta tattttttat ttatattgat
     4561 gattgatctc aataagttaa gagagagtat ttgaatttca ttttttgttt gacttaaact
     4621 caaggagagt aacaatgatt ggtagtggtg atactaaaca atgcaaaaaa ttttctgcgt
     4681 gtgatggaaa ataccacgtc tacgatcccc tcgccctaga cttggacggc gacggcatag
     4741 aaacagtcac cgccaaaggc ttttcaggca gcctgaagac tgagagagtg aatacgatga
     4801 gtatacactc tatgccacta aattgatatt cactaaatca taccagctat attttattta
     4861 atgagacata tgaaaaataa aaattattta ctagtattta tagttttaca tatagccttg
     4921 atagtaatta atatagtgtt tggttatttt gtttttctat ttgatttttt tgcgtttttg
     4981 ttttttgcaa acgtctttct tgctgtaaat ttattatttt tagaaaaaaa cataaaaaac
     5041 aaattattgt ttttattgcc gatttctatt attatatgga tggtaattca tattagtatg
     5101 ataaatataa aattttataa atttgagcat caaataaagg aacaaaatat atcctcgatt
     5161 actggggtga taaaaccaca tgatagttat aattatgttt atgactcaaa tggatatgct
     5221 aaattaaaag ataatcatag atatggtagg gtaattagag aaacacctta tattgatgta
     5281 gttgcatctg atgttaaaaa taaatccata agattaagct tggtttgtgg tattcattca
     5341 tatgctccat gtgccaattt tataaaattt gcaaaaaaac ctgttaaaat ttatttttat
     5401 aatcaacctc aaggagattt tatagataat gtaatatttg aaattaatga tggaaacaaa
     5461 agtttgtact tgttagataa gtataaaaca ttttttctta ttgaaaacag tgtttgtatc
     5521 gtattaatta ttttatattt aaaatttaat ttgcttttat ataggactta cttcaatgag
     5581 ttggaatagt tttggtaatt ttatgagcgc acgctcatcc gcgttagcag aatttggaaa
     5641 tatggttgct aatttagttt ctgcaaaaaa tgagaaagat atctcgaaac gtaatgaata
     5701 ttacaaacaa gctggttata gtgcattatt agcatttggt aatttg
//
LOCUS       DAWGKF010000128         5727 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.128, whole genome shotgun sequence.
ACCESSION   DAWGKF010000128 DAWGKF010000000
VERSION     DAWGKF010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5727)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5727)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5727
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.128"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            34..1389
                     /locus_tag="WHR07_001633"
     CDS             34..1389
                     /locus_tag="WHR07_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC45 family MFS transporter"
                     /protein_id="HEZ2130826.1"
                     /translation="MSEYTPQTAKQGLPALAKSTIWMLSFGFLGVQTAFTLQSSQMSR
                     IFQTLGADPHNLGWFFILPPLAGMLVQPIVGHYSDRTWKPRLGGRRLPYLFYGTLIAV
                     IVMILMPNSGSFGFGYASLAALSFGALMIALLDVSSNMAMQPFKMMVGDMVNEEQKSY
                     AYGIQSFLANTGAVVAAILPFVFAYIGLANTAEKGVVPQTVVVAFYVGAALLIITSAF
                     TIFKVKEYDPETYARYHGIDVAANQEKANWFELLKTAPKAFWTVTLVQFFCWFAFQYM
                     WTYSAGAIAENVWHTTDASSVGYQEAGNWYGVLAAVQSVAAVICSFVLAKVPNKYHKA
                     GYFGCLALGALGFFSVFFIGNQYALVLSYTLIGIAWAGIITYPLTIVTNALSGKHMGT
                     YLGLFNGSICMPQIVASLLSFVLFPMMGGLQATMFLVGGVVLLLGAFSVFLIKETHGG
                     V"
     gene            1393..2430
                     /locus_tag="WHR07_001634"
     CDS             1393..2430
                     /locus_tag="WHR07_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose mutarotase"
                     /protein_id="HEZ2130827.1"
                     /translation="MSDTPATPATPATPATRDFGLIDGRAVTGYVLSNRRGTRVCVLD
                     LGGIVQEFSVLADGVRENLVVSFDDAASYADNPFQINKQIGRVAGRIRGAAFDINGRT
                     YRVEANEGRNALHGGSHGLAVTRFNAVAADGRSVVLRSRLQQSADGYPNDLDLDISYR
                     LDEDNRLTVSYRATALGDTVFDPTLHIYWRLDAGLHDAVLHIPQGGHIPADAEKLPVS
                     TVSDDLEVFDFSRPKPLDAAVAALRRETGRAGFDDAYRVPSDIGRPAAVLQAGRRRRI
                     SIYSDRNGLVIFTAAPQDFARHDAGVYDALATEAQTLPDSLNWPEFGNIRLNKGDTRE
                     ATIAYGIESLS"
     gene            2664..4922
                     /locus_tag="WHR07_001635"
     CDS             2664..4922
                     /locus_tag="WHR07_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
                     /protein_id="HEZ2130828.1"
                     /translation="MYTRIMEISPWTLRSAKLEKEHKRLQESLTSLGNGYMGMRGSFE
                     ETYSADSHLGTYIAGVWFPDKTRVGWWKNGYPKYFGKAINALNFSKVKIFVDGQEVDL
                     AKNDVAGFSVELDMQHGVLRRSFTVFGVRFDVCKFLSVAQKELALIRWEAVSIDGKTH
                     QVRIDSIIDADVKNEDSNYEEKFWQVLDKGVSDDRSYIATQTVTNPFGVEQFIVNAEQ
                     TFAGSFKALGGSQTDWQVSNSFEAEVGGTPKTFEKRVIVTTSRDYQGLEAVKAAGRAL
                     SEKVAGVAFETLLDAHKAGWLHRWEIADVVIEGSDEAQQGIRFNLFQLFSTYYGEDAR
                     LNIGPKGFTGEKYGGATYWDTEAYAVPLYLALAEPEVTRNLLQYRRNQLPQAQHNARE
                     QGLAGALYPMVTFTGIECHNEWEITFEEIHRNGAIPYAIYNYTNYTGDEGYLAKEGLE
                     VLVEVSRFWADRVHFSKRNGKYMIHGVTGPNEYENNINNNWYTNTLAAWVLDYTREAL
                     AKYPRPDLNVRAAELEKWADISANMYRPHDEELGVFVQHDGFLDKDIRPVSALSPDDL
                     PLNQKWSWDKILRSPFIKQADVLQGIYFFGDRFNIDEKRRNFDFYEPMTVHESSLSPC
                     IHSILAAELGKEEKAVEMYRRTARLDLDNYNNDTEDGLHITSMTGSWLAIVQGFAQMK
                     TWGGKLSFAPFLPSAWTGYAFHINYRGRLIKVAVGKENVVFTLLKGEPLDLQVYGKDI
                     TLNGSHTAALEK"
     gene            4935..5600
                     /gene="pgmB"
                     /locus_tag="WHR07_001636"
     CDS             4935..5600
                     /gene="pgmB"
                     /locus_tag="WHR07_001636"
                     /EC_number="5.4.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase"
                     /protein_id="HEZ2130829.1"
                     /translation="MTFTAVLFDLDGVITDTAEYHYRAWKKLAEELGISIDRKFNEQL
                     KGVSRDDSLKRILAHGGKTVSEAEFAELTRRKNDNYVEMIQAVKPEDVYPGILPLLET
                     LKANGKKIALASASKNGPFLLERMGLTHFFDTVADPAAVAHSKPAPDIFLAAAEGVGA
                     DIRRCIGIEDAAAGVAAIKASGALPIGVGKAEDLGSDIPLVSGTAELTYAYLQNVWAQ
                     SGR"
BASE COUNT         1289 a         1662 c         1551 g         1225 t
ORIGIN      
        1 ctatactttt caaatcaaaa aaggatttac cttatgtcgg aatatacgcc tcaaacagca
       61 aaacaaggtt tgcccgcgct ggcaaaaagc acgatttgga tgctcagttt cggctttctc
      121 ggcgttcaga cggcctttac cctgcaaagc tcgcaaatga gccgcatttt tcaaacgcta
      181 ggcgcagacc cgcacaattt gggctggttt ttcatcctgc cgccgctggc ggggatgctg
      241 gtgcagccga ttgtcggcca ttactccgac cgcacttgga agccgcgttt aggcggccgc
      301 cgtctgccgt atctgtttta tggcacgctg attgcggtta ttgtgatgat tttgatgccg
      361 aactcgggca gcttcggttt cggctatgcg tcgctggcgg ctttgtcgtt cggcgcgctg
      421 atgattgcgc tgttggacgt gtcgtcgaat atggcgatgc agccgtttaa gatgatggtc
      481 ggcgatatgg tcaacgagga gcagaaaagc tacgcctacg ggattcaaag tttcttagcg
      541 aatacgggcg cggtcgtggc ggcgattctg ccgtttgtgt tcgcgtatat cggtttggcg
      601 aacaccgccg agaaaggcgt tgtgccacaa accgtggtcg tagcattcta tgtgggcgcg
      661 gcattactga ttattaccag tgcgttcaca atcttcaaag tcaaagaata cgacccggaa
      721 acctatgccc gttaccacgg catcgatgtc gccgcgaatc aggaaaaagc caactggttc
      781 gaacttttaa aaacggcacc taaagcgttt tggacggtta ctctggtaca gtttttctgc
      841 tggttcgcct tccaatatat gtggacttac tcggcaggcg cgattgcgga aaacgtctgg
      901 cacaccactg atgcgtcttc cgtaggttat caggaggcgg gcaactggta cggcgttttg
      961 gcggcggtgc agtcggttgc ggcggtgatt tgttcgtttg tattggcgaa agtgccgaat
     1021 aaataccata aggcgggtta tttcggctgt ttggctttgg gcgcgctcgg ctttttctcc
     1081 gttttcttca tcggcaacca atacgcgctg gtgttgtctt ataccttaat cggcatcgct
     1141 tgggcgggca ttatcactta tccgctgacg attgtgacca acgccttgtc gggcaagcat
     1201 atgggcactt acttgggcct gtttaacggc tctatctgta tgccgcaaat cgtcgcttcg
     1261 ctgttgagtt tcgtgctttt cccgatgatg ggcggcttgc aggccactat gttcttggta
     1321 gggggcgtcg tcctgctgct gggcgcgttt tccgtgttcc tgattaaaga aacacacggc
     1381 ggggtttgag cgatgagcga tacccccgct acccccgcta cccccgctac ccccgctacc
     1441 cgcgatttcg gcctgatcga cgggcgtgcc gtaaccggct atgtgctgtc caatcggcgt
     1501 ggtacgcgtg tctgcgtgct ggacttgggc gggattgtgc aggaattttc cgttttggca
     1561 gacggcgtgc gcgaaaacct cgtggtgtcg ttcgacgatg cggcttccta tgcggacaat
     1621 ccgtttcaga ttaacaagca gatagggcgc gtggccggac gcatccgcgg tgcggcgttc
     1681 gacatcaacg gcaggactta ccgcgtggag gccaacgaag gcaggaacgc gctgcacggc
     1741 ggttcgcacg ggctggccgt tacccgtttc aacgcggtgg cggcagacgg ccgttcggtg
     1801 gtgctgcgca gccgcctgca acagtcggcc gacggttatc ccaacgattt ggatttggat
     1861 atttcctacc gcttggacga ggacaaccgg cttaccgtta gctatcgcgc caccgcgctc
     1921 ggcgacacgg tgttcgaccc gacgctgcac atttactggc ggctggacgc gggcctgcac
     1981 gatgcggttc tgcatattcc gcagggcgga catattccgg ccgatgccga aaaactgccc
     2041 gtctcaacgg tttcagacga cctcgaagta tttgatttca gccggcccaa gccgctggat
     2101 gccgccgttg ccgccctgcg ccgcgaaacg ggtcgggccg gttttgacga cgcttaccgc
     2161 gtgccgtccg atataggccg tcccgccgct gtgttgcaag ccggacgccg ccgtcgtatc
     2221 agcatataca gcgaccgcaa cggcttggtc atctttaccg ccgccccgca ggatttcgcg
     2281 cggcacgatg cgggcgttta cgacgcgctg gcgaccgagg cgcagacgct gcccgacagc
     2341 ctgaattggc ccgagttcgg caatattcgt ctgaacaagg gtgataccag ggaggcgacg
     2401 attgcttacg gcatcgaatc cctttcttag gagcttccta acaccggttg cagacggcct
     2461 ttttatagtg gattaacaaa aaccggtacg gcgttgcctc ggcttagctc aaagagaacg
     2521 attctctaag gtgctgaagc accaagtgaa tcggttccgt actatttgta ctgtttgcgg
     2581 cttcgtcgcc ttgtcctgat ttttgttaat ccactataag atttcaccat tccctcaaat
     2641 caatccaaac aggagcttca taaatgtaca caagaattat ggaaatcagc ccttggacgc
     2701 tgcgttcggc aaagctggaa aaagaacaca aacggctgca agagagcctg accagtttgg
     2761 gcaacggcta tatgggtatg cgcggcagct ttgaggaaac ctactccgcc gacagccact
     2821 tgggcaccta catcgccggc gtgtggttcc ccgacaaaac ccgcgtcggc tggtggaaaa
     2881 acggctatcc caaatatttc ggcaaagcca tcaacgcgct caatttcagc aaagtcaaaa
     2941 tctttgtcga tggtcaagag gtggacttgg cgaaaaacga tgttgccggc ttctccgtcg
     3001 aactcgatat gcagcacggc gtgttgcgcc gctcgttcac cgtattcggc gtgcgtttcg
     3061 atgtgtgcaa attcctgtcc gtcgcacaaa aagagctggc tctcatccgc tgggaagccg
     3121 tatctatcga cggcaaaacc caccaagtcc gcatcgattc catcatcgat gccgacgtga
     3181 aaaacgaaga ttccaactac gaagaaaaat tctggcaagt attggacaaa ggcgtttcag
     3241 acgaccgctc ctacattgcc acccaaaccg tcaccaatcc cttcggcgtg gaacaattta
     3301 tcgtcaacgc cgagcaaact ttcgccggca gcttcaaagc cctcggcggc agccaaaccg
     3361 actggcaggt ctccaattct ttcgaggccg aagtcggcgg cacgcccaaa acctttgaaa
     3421 aacgggttat tgttaccacc agccgcgatt atcagggctt ggaagcagtg aaagccgcag
     3481 gccgtgcctt gtcggaaaaa gtcgcaggcg ttgcgtttga aaccttgctg gacgcgcaca
     3541 aagcaggctg gctgcaccgt tgggaaatcg ccgacgtggt catcgaaggc agcgacgaag
     3601 cgcagcaagg catccgtttc aatctgttcc aactgttctc cacctactac ggcgaagatg
     3661 cgcgcctgaa catcggcccc aaaggcttta ccggcgaaaa atacggcggc gcgacctatt
     3721 gggataccga agcctatgcc gtaccgctct acctcgcact ggcggaaccc gaagttaccc
     3781 gcaacctgct gcaataccgc cgcaaccaac tgccgcaggc gcagcacaac gcgcgcgaac
     3841 agggcttggc gggcgcactc tatccgatgg taacgtttac gggtatcgag tgccacaacg
     3901 aatgggaaat caccttcgag gaaatccacc gcaacggcgc gattccttac gccatctaca
     3961 actacaccaa ctacaccggc gacgagggct atcttgccaa agaaggcttg gaagtcttgg
     4021 tcgaagtgtc ccgcttctgg gcggaccgcg tccacttctc caaacgcaac ggcaaataca
     4081 tgattcacgg cgtaaccggc ccgaacgaat acgaaaacaa catcaacaac aactggtaca
     4141 ccaacaccct cgccgcatgg gtattggact acacccgcga agccttggcg aaatacccgc
     4201 gtccggattt gaacgtgcgt gccgccgagt tggaaaaatg ggcggacatc agcgcgaata
     4261 tgtaccgtcc gcatgacgaa gaactcggcg tattcgtgca acacgacggc ttcctcgaca
     4321 aagacatccg ccccgtgtcc gcgctttcgc ccgacgattt gccgctcaac cagaaatggt
     4381 cgtgggacaa aatcctgcgt tcgcccttta tcaaacaggc ggacgtattg caaggcatct
     4441 atttcttcgg cgaccgtttc aatatcgacg aaaaacgccg caatttcgac ttctacgaac
     4501 cgatgaccgt gcacgaaagc tcgttgtcgc cgtgtatcca ctctattctc gccgccgaac
     4561 tgggcaaaga agaaaaagcc gtggaaatgt accggcgcac cgcacgcctg gacttggaca
     4621 actacaacaa cgacaccgaa gacggcctgc acattacttc tatgactggc tcgtggctcg
     4681 ccatcgtcca aggtttcgcc caaatgaaaa cttggggcgg taaactcagc ttcgcaccgt
     4741 tcctgccgag cgcatggaca ggctacgcct tccatatcaa ctaccgaggc cgtctgatta
     4801 aagtcgccgt cggcaaagaa aacgtcgtct tcaccctgct caaaggcgag ccgctcgatt
     4861 tgcaggtgta cggcaaagac atcacactca acggcagcca taccgccgcg ttggaaaaat
     4921 aaggagggcg caaaatgacg tttaccgcag tgctcttcga tctcgacggc gtcatcaccg
     4981 acaccgccga ataccactac cgcgcgtgga aaaaactcgc cgaagaactg ggcatcagca
     5041 tcgaccgcaa gtttaacgag cagctcaaag gcgtgtcgcg cgacgattcg ctcaaacgca
     5101 tcctcgcgca cggcggcaaa accgtcagcg aagccgagtt cgccgaactg acccgccgta
     5161 aaaacgacaa ctacgtcgag atgattcagg cagtcaaacc cgaagacgtg tatcccggca
     5221 ttttgcccct gctggaaaca ttgaaagcaa acggcaaaaa aatcgccctc gcgtccgcca
     5281 gtaaaaacgg cccgttcctg ctcgaacgca tggggctgac ccacttcttc gacaccgtcg
     5341 ccgaccctgc cgccgtcgcg cattccaaac ccgcccccga catcttcctc gccgccgccg
     5401 agggcgtggg cgcggacatc cgccgctgca tcggcattga agacgctgcc gcaggtgtcg
     5461 ccgccatcaa agcctccggc gccttaccca tcggtgtggg caaagccgaa gacttgggta
     5521 gcgacatccc gctggtgtcc ggcaccgccg agctgaccta cgcctacctg caaaacgtgt
     5581 gggcacagtc gggcaggtaa aacgcgtcag ataaagtgtt aaggaagtaa aaggccgtct
     5641 gaacagtgtt tcagacggcc tgagaccttt gcaaaattcc tgtccctccc gacagccgaa
     5701 acccaaacac aggatttcgg ctgtttt
//
LOCUS       DAWGKF010000129         5675 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.129, whole genome shotgun sequence.
ACCESSION   DAWGKF010000129 DAWGKF010000000
VERSION     DAWGKF010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5675)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5675)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5675
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.129"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(81..842)
                     /locus_tag="WHR07_001637"
     CDS             complement(81..842)
                     /locus_tag="WHR07_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130830.1"
                     /translation="MDANKEPNWEKRLENLRQTRRMKVVPTYAPLSRPSETGTDASVP
                     KLDDASRNRVLKAYLKKWQEEHNAAVADCGEEIETDPMIVLQENWLNAQASLQMSVSE
                     KHIESRRRIRFDTKKDSVEFETGQIEGGENADEAESGTNEPAVSENGENDAEETLMPV
                     QLNILNPKAVNRREVFCLSEQELTERLIKRLRPHLTDTVNGIIRTAVQKQMAVFTYQL
                     QQMLHEQAGAVVEDVLEHDVRKILNDIKYELKYKR"
     gene            942..1193
                     /locus_tag="WHR07_001638"
     CDS             942..1193
                     /locus_tag="WHR07_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130831.1"
                     /translation="MGSIEQRLEYLEEANDVLRMQNHVLSTAFKALIRALPADTAEVA
                     LESIQLAFEDALAELSYEDSPHTDLFHDVTYAFFREKER"
     gene            1245..2051
                     /locus_tag="WHR07_001639"
     CDS             1245..2051
                     /locus_tag="WHR07_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEZ2130832.1"
                     /translation="MNMKKWIAAALACSALALSACGGQGKDAAAPAANPDKVYRVASN
                     AEFAPFESLDSKGNVEGFDVDLMNAMAKAGNFKIEFKHQPWDSLFPALNNGDADVVMS
                     GVTITDDRKQSMDFSDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVTGYTGDFSVS
                     KLLGNDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGMDFVTLPDF
                     TTEHYGIAVRKGDEATVKMLNDALEKVRESGEYDKIYAKYFAKEDEQAAK"
     gene            2358..3881
                     /locus_tag="WHR07_001640"
     CDS             2358..3881
                     /locus_tag="WHR07_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HEZ2130833.1"
                     /translation="MTVIKQEDFIQSICDAFQFISYYHPKDYIDALYKAWQKEENPAA
                     KDAMTQILVNSRMCAENNRPICQDTGIATVFLKVGMDVQWDADMSVEEMVNEGVRRAY
                     TWEGNTLRASVLADPAGKRQNTKDNTPAVIHMSIVPGGKVEVTCAAKGGGSENKSKLA
                     MLNPSDNIVDWVLKSIPTMGAGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQ
                     EKAASGAELSTTEALRLELFEKVNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAM
                     IPNCAATRHVEFELDGSGPVELTPPRVEDWPDLTYSPDNGKRVDVDKLTKEEVASWKT
                     GDVLLLNGKILTGRDAAHKRLVDMLNKGEELPVDFTNRLIYYVGPVDPVGDEVVGPAG
                     PTTATRMDKFTRQMLEQTGLLGMIGKSERGVATCEAIADNKAVYLMAVGGAAYLVAKA
                     IKSSKVLAFPELGMEAIYEFEVKDMPVTVAVDSKGESIHATAPRKWQAKIGIIPVES"
     gene            3979..5391
                     /gene="trkA"
                     /locus_tag="WHR07_001641"
     CDS             3979..5391
                     /gene="trkA"
                     /locus_tag="WHR07_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HEZ2130834.1"
                     /translation="MKILILGNGQVGSTVAQNLAAIPNNDVTVIDIDEKALQETGSRL
                     DVQTVFGNGASPFTLERAGAEDADLLLALSRSDETNIVACKVAADLFNIPGRIARVRS
                     SEYLEYLSPKLENNENGSLSIFGITETISPEQLVTEQLAGLIDCPGALQVLRFADDRV
                     RMVIIQARRGGLLVGRSIADIAQDLPDGADCQICAVYRNNRLIVPAPQTVIIEGDEIL
                     FAAAAENIGAVIPELRPKETSTRRIMIAGGGNIGYRLAKQLEHAYNVKIIECRPRRAE
                     WIAENLDNTLVLQGSATDETLLDNEYIDEIDVFCALTNDDESNIMSALLAKNLGAKRV
                     IGIVNRSSYVDLLEGNKIDIVVSPHLITIGSILAHIRRGDIVAVHPIRRGTAEAIEVV
                     AHGDKKTSAIIGRRISGIKWPEGCHIAAVVRAGTGETIMGHHTETVIQDGDHIIFFVS
                     RRRILNELEKLIQVKMGFFG"
BASE COUNT         1425 a         1712 c         1382 g         1156 t
ORIGIN      
        1 ttttgcgcct gttccatgag gctttcaagt cggatgagaa tgcaaatgcc gtctgaaacg
       61 gctttcagac ggcatggcaa tcagcgtttg tattttaact cgtacttgat gtcgttgagg
      121 attttgcgga catcgtgttc caacacgtct tcgactaccg cccccgcctg ctcgtgcagc
      181 atctgctgga gctgataggt gaaaaccgcc atctgctttt gcaccgccgt tcggatgatg
      241 ccgttgacgg tatcggtcag atgggggcgc aggcgtttga tcagccgttc ggtcagctcc
      301 tgttcggaca ggcagaacac ttcgcgccgg ttgacggctt tcgggttcag gatattgagt
      361 tggacgggca tcaacgtttc ttccgcatcg ttttccccgt tttccgaaac cgccggctca
      421 ttcgtgccgg attctgcctc gtcggcgttt tccccgcctt caatctgtcc ggtttcaaat
      481 tcgacactgt cttttttggt atcaaaccgg attctccgcc gcgattcgat gtgtttttcc
      541 gaaaccgaca tttgcaggga agcctgcgcg ttgagccagt tttcctgaag gacgatcatc
      601 gggtcggttt cgatttcttc cccgcaatcg gcaacggcgg cattgtgctc ctcctgccat
      661 ttcttcagat acgcctttaa cacacggttt cggcttgcat cgtccagttt cggcacagac
      721 gcgtccgttc cggtttcaga agggcgggac agcggcgcgt aagtcggcac taccttcata
      781 cggcgcgtct gacgcaggtt ttccaaacgt ttttcccaat tcggctcttt attcgcatcc
      841 attttcggct tccggtcctt aatctttgca agcagacaaa cccgcgccca aagcgcggtt
      901 tgatataatg gcgcatttta acagattcgc gaggatacat catgggcagc atcgaacagc
      961 gtttggaata tctggaagag gcgaacgacg tgctgcgtat gcagaaccac gtcctgtcca
     1021 ccgccttcaa agccttaatc cgcgcccttc ccgccgacac cgccgaagtc gcgctcgagt
     1081 ccatccagct tgcttttgag gacgccttgg cagaattgag ctatgaggac agcccgcata
     1141 cggatttgtt ccacgacgtt acttatgcgt ttttccgtga aaaagaacgt taattttatg
     1201 ttaaactgat tttttaggct ttttgattac cgaaaggaat tttgatgaat atgaaaaaat
     1261 ggattgccgc cgcccttgcc tgttccgcac tcgcgctgtc tgcctgcggc ggtcagggca
     1321 aagatgccgc cgcgcccgcc gcaaaccccg acaaagtgta ccgcgtggct tccaacgccg
     1381 agtttgcccc ctttgaatct ttagactcga aaggcaatgt cgaaggtttc gatgtggatt
     1441 tgatgaacgc gatggcgaag gcgggcaatt ttaaaatcga attcaaacac cagccgtggg
     1501 acagcctttt ccccgccttg aacaacggcg atgcggacgt tgtgatgtcg ggcgtaacca
     1561 ttaccgacga ccgcaaacag tctatggact tcagcgaccc gtattttgaa atcacccaag
     1621 tcgtcctcgt tccgaaaggc aaaaaaatat cttcttccga cgatttgaaa aacatgaaca
     1681 aagtcggcgt ggtaaccggc tacacgggcg atttctccgt atccaaactc ttgggcaacg
     1741 acaatccgaa aatcgcgcgc tttgaaaacg ttcccctgat tatcaaagaa ctggaaaacg
     1801 gcggcttgga ttccgtggtc agcgacagcg cggtcatcgc caattatgtg aaaaacaatc
     1861 cgaccaaagg gatggacttc gttaccctgc ccgacttcac caccgaacac tacggcatcg
     1921 cggtacgcaa aggcgacgaa gcaaccgtca aaatgctgaa cgatgcgttg gaaaaagtac
     1981 gcgaaagcgg cgaatacgac aagatttacg ccaaatattt tgcaaaagaa gacgaacagg
     2041 ccgcaaaata agcccgccca tccgaacaca atgccgtctg aagccctttc agacggcatt
     2101 gttcatcaat cggcctacaa tgaactgcct gctgatttct ccctaccgca aagcaacagg
     2161 caaagattac aaatatcaaa atccgagtaa aacagtattt tattaaaaca aattgataat
     2221 caagagatta gaattatgta ttgtctttac cgtacaaacg ctggcactat ttcaacctga
     2281 taaaaaacag ccttcaaaaa ggttgcttaa aacagcagca gacacttacc gccacaacct
     2341 tgaaaaggaa cacaatcatg accgtcatca aacaggaaga ctttatccaa agcatttgcg
     2401 atgccttcca attcatcagc tactaccatc cgaaagacta catcgacgcg ctttataagg
     2461 cgtggcagaa ggaagaaaac cccgccgcca aagacgcgat gacgcagatt ttggtcaaca
     2521 gccgcatgtg tgccgaaaac aaccgcccca tctgccaaga taccggtatc gcgaccgtct
     2581 tcctcaaagt cggtatggat gtgcagtggg atgcggacat gagcgtcgaa gaaatggtta
     2641 acgaaggcgt gcgccgcgcc tacacttggg aaggcaacac cctgcgcgcc tctgtcctcg
     2701 ccgatccggc cggcaaacgt caaaacacca aagacaacac ccccgccgtc atccatatga
     2761 gcatcgtgcc gggcggtaaa gtcgaagtaa cctgcgcggc aaaaggcggc ggctctgaaa
     2821 acaaatccaa actcgccatg ctcaatcctt ccgacaacat cgtcgattgg gtattgaaaa
     2881 gcatcccaac catgggcgca ggctggtgtc ctcccggcat cttgggcatc ggcatcggcg
     2941 gcacgcccga aaaagccgtg ctgatggcaa aagagtccct gatgagccac atcgacattc
     3001 aagagttgca ggaaaaagca gcgtcaggtg cagaattgtc caccaccgaa gccctgcgcc
     3061 tcgaactctt tgaaaaagtc aacgcgctag gcatcggcgc gcaaggcttg ggcggtctga
     3121 ccaccgtgtt ggacgtgaaa atcctcgatt acccgaccca cgccgcctcc aaaccgattg
     3181 ccatgattcc gaactgcgcc gccacccgcc acgtcgaatt tgaattggac ggctcaggcc
     3241 ctgtcgaact cacgccgccg cgcgtcgaag actggcccga tttgacttac agccccgaca
     3301 acggcaaacg cgtcgatgtc gacaagctga ccaaagaaga agtggcaagc tggaaaaccg
     3361 gcgacgtatt gctgttgaac ggcaaaatcc tcaccggccg cgatgccgca cacaaacgcc
     3421 tcgtcgatat gctcaacaaa ggcgaagaat tgcccgtcga tttcaccaac cgcctgattt
     3481 actacgtcgg ccccgtcgat ccggtcggcg atgaagtcgt cggtccggca ggtccgacca
     3541 cagccacccg catggacaaa ttcacccgcc aaatgctcga acaaaccggc ctcttgggca
     3601 tgatcggcaa atccgagcgc ggcgtggcca cctgcgaagc catcgccgac aacaaagccg
     3661 tgtacctcat ggcagtcggc ggcgcggcgt atctcgtggc aaaagccatc aaatcttcca
     3721 aagtcttggc gttccccgaa ttgggcatgg aagccattta cgaatttgaa gtcaaagaca
     3781 tgcccgtaac cgtcgccgta gatagcaaag gcgaatccat ccacgccacc gccccgcgca
     3841 aatggcaggc gaaaatcggc atcatccccg tcgaatcttg aggcgccatg ccgtctgaac
     3901 acaaaatctg ccttcagacg gcatttccgc ccccggttgc ggtacaatcc accatttcat
     3961 cactcggcga cccacaccgt gaaaatcctc attttaggca acggacaggt aggttctacc
     4021 gtcgcacaaa accttgccgc catacccaac aacgacgtaa ccgttatcga catcgacgaa
     4081 aaagcattgc aggaaacagg cagccgcctc gatgtccaaa ccgttttcgg caacggcgca
     4141 tcccccttca cattagaacg cgccggcgcg gaagatgccg acttgctgct cgcgctctcc
     4201 cgcagcgacg aaaccaacat cgtcgcctgc aaagttgccg ccgacctgtt caacatcccc
     4261 ggccgcatcg cgcgcgtccg ttccagcgaa tacctcgaat acctcagccc caagctcgaa
     4321 aacaacgaaa acggcagcct ttccatattc ggcataaccg aaaccatcag ccccgaacag
     4381 ctcgttaccg aacagcttgc cggcctgata gactgcccgg gcgcattgca ggttttacgt
     4441 tttgcagacg accgcgtgcg gatggtcatc atacaggcgc ggcgcggcgg actgcttgtc
     4501 ggacgcagca ttgccgacat cgcccaagat ttgcccgacg gggccgactg ccaaatctgc
     4561 gccgtttacc gcaacaaccg cctcatcgtc cccgcgccgc aaaccgtcat catcgaaggc
     4621 gacgaaatcc tatttgccgc cgccgccgaa aacatcggcg cggtcatacc cgaattgcgc
     4681 cccaaagaaa ccagcacccg ccgcatcatg attgccggcg gcggcaacat cggctaccgt
     4741 ctcgccaagc agctcgaaca cgcatacaac gtcaaaatca tcgaatgccg gccgcgccgt
     4801 gccgaatgga tagccgaaaa cctcgacaac accctcgtcc tgcaaggttc ggcaaccgac
     4861 gaaaccctgc tcgacaacga atacatcgac gaaatcgacg tattctgcgc cctgaccaac
     4921 gacgacgaaa gcaacattat gtccgccctt ttggcgaaaa acctcggcgc gaagcgcgtc
     4981 atcggcatcg tcaaccgctc aagctacgtc gatttgctcg aaggcaacaa aatcgacatc
     5041 gtcgtctccc cccacctcat caccatcggc tcgatactcg cccacatccg gcgcggcgac
     5101 atcgttgccg tccaccccat ccggcgcggc acggcggaag ccatcgaagt cgtcgcacac
     5161 ggcgacaaaa aaacttccgc catcatcggc aggcgcatca gcggcatcaa atggcccgaa
     5221 ggctgccaca ttgccgccgt cgtccgcgcc ggaaccggcg aaaccattat gggacaccat
     5281 accgaaaccg tcatccaaga cggcgaccac atcatctttt tcgtctcgcg ccggcgcatc
     5341 ctgaacgaac tggaaaaact catccaggtc aaaatgggct ttttcggata aaccgcccca
     5401 ttccggacat attgccgcca agcggtatgg aagcagaata atggtaggtg ggcttcagac
     5461 ggcatccgcc ctccccgtca ttcccgcgta agcgggaatc cagaccttgg gatagcggca
     5521 atattcaaag gttataaaag acccgtcatt cccgcgcagg cgggaatcca gaccttggga
     5581 tagcggcaat attcaaaggt tagctgaagc tttagagatt ctagattccc gtttccacgg
     5641 gaatgacgaa aggttgcggg aatccaaacc attgg
//
LOCUS       DAWGKF010000130         5617 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.130, whole genome shotgun sequence.
ACCESSION   DAWGKF010000130 DAWGKF010000000
VERSION     DAWGKF010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5617)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5617)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5617
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.130"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(98..1231)
                     /gene="nrdB"
                     /locus_tag="WHR07_001642"
     CDS             complement(98..1231)
                     /gene="nrdB"
                     /locus_tag="WHR07_001642"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HEZ2130835.1"
                     /translation="MSYSTFPKTKNDALNEPMFFGQPVNVARYDQQKYEVFEKLIEKQ
                     LSFFWRPEEIDVSRDRIDYANLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSI
                     PELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARAEDIACYYDD
                     LIEYTQYYNLLGEGMHNVGGKPITVSLRGLKKKLYLCLMCVNVLEAIRFYVSFACSFA
                     FAERELMEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQL
                     FKKAAEQEKEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPI
                     PWINAWLSSDNVQVAPQEVEISSYLIGQIDSEVNTDDLGDFEL"
     gene            complement(1445..2425)
                     /locus_tag="WHR07_001643"
     CDS             complement(1445..2425)
                     /locus_tag="WHR07_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HEZ2130836.1"
                     /translation="MTAARAGLVRFNYLKVKQAVQSKQIKGFKLWKSYDEQLEILRSR
                     GLQIDDEKKALGYLRTIGYYRLSGYFYSFRQFAPESSKSRLDEFITDTRFEDVKSLYM
                     FDKKLRQLALDALERIEVALRVNIAHTLGRHDPLAYKDSKYSATGFDHAEWLDRYNRL
                     VEREKKTGFVKHHLEHYADLPVWVACEVWDFGTMSMLYKGMLNKDKDSIAKLYRLKDG
                     KHLQTHLHAFNFIRNVSAHHSRLWNRDITFKASLKGLSDAEWKSLPINKPFVYFCLMK
                     RMLDVICPRTEWGNRLLALLDEFPDVANEAVSLRDMGLENNPRDWRLWQG"
     gene            complement(2391..4670)
                     /gene="nrdA"
                     /locus_tag="WHR07_001644"
     CDS             complement(2391..4670)
                     /gene="nrdA"
                     /locus_tag="WHR07_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HEZ2130837.1"
                     /translation="MNTPTDLKVTKRDGRLEAIDLDKIHRVVTWAADGLENVSVSQVE
                     LKSHIQFYNGIRTDDIHETIIKAAADLISEDTPDYQYLAARLAIFHLRKIAYGEYEPP
                     HLYDHVKKLTDAGKYDRHILEDYSREEFDELNAYIDHERDMSFSYAAVKQLEGKYLVQ
                     NRVTRQIYETPQFLYVLVAMCLFSKYPKEARLGYVKRFYDAVSTFKVSLPTPIMSGVR
                     TPTRQFSSCVLIECDDSLDSINATTSAIVKYVSQRAGIGINAGRIRGLDSEIRGGEAR
                     HTGCIPFFKMFQAAVKSCSQGGVRGGAATLFYPLWHIEAESLLVLKNNRGVEDNRIRQ
                     LDYGVQINRLLYTRLIKGGNITLFSPNEVPGLYEAFFADQDEFERLYTKYEQDPDIRK
                     RIIPAADLFSTLMQERAGTGRIYIQNVDHCNTHSPFDPRVAPVHQSNLCMEIALPTKP
                     LDNINDPNGEIALCTLSAFNLGALNSLDELEGLADLTVRALDALLDYQGYPVEAARTS
                     TMGRRSLGIGVINYAYYLAKNGVRYSDGSALGLTHRTFEAIQYYLLKASANLAKEYGA
                     CTLFNQTVYSQGKLPIDTYKKDLDAVCGEPLHYDWESLRAEIVKYGLRNSTLTALMPS
                     ETSSQIANATNGIEPPRGLVTVKASKDGILKQVVPEFETLKDAYETLWQLPGNEGYLK
                     LVGVMQKFVDQSISANTAYDPNKFEGSKVSMKQMLKDLLTAYKYGVKTLYYHNTRDGA
                     DDTQADIQDDGCAGGACKI"
     gene            5198..5509
                     /locus_tag="WHR07_001645"
     CDS             5198..5509
                     /locus_tag="WHR07_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein"
                     /protein_id="HEZ2130838.1"
                     /translation="MLAILLSAILGLVSTTAAAGTSEPAHRDTKHIRKANKQMLHPEC
                     RKYLERRAAWYRSQGNVQELRENKKARKAFRSLPYAEQKIQCRAAYEAFDDFDGGSFR
                     R"
BASE COUNT         1407 a         1364 c         1309 g         1537 t
ORIGIN      
        1 gaacaataac cgatcctacc cgctgttttt cccatcatac aacatacaaa tgccgtctga
       61 aacatccggc ttcagacggc attttgtcaa aaaacgttta caactcaaaa tcgcccaaat
      121 catccgtatt cacttcagaa tcgatctgac cgatcaaata agaggatatt tccacttcct
      181 gcggcgcgac ctgtacgttg tcggacgaca gccacgcatt aatccacgga atcgggtttt
      241 gatttgcgcc ttcaaatccg gccggcaacc ccaccgcctg catacgcaga ttggtaatat
      301 attcgacgta ttgggataag atttctttgt tcaaaccgat catcgaaccg tccttaaaca
      361 aatatgccgc ccattctttt tcctgttccg ccgctttttt gaagagttga aaacattcgt
      421 cctgcaactc ggcggcaatt tctgccattt cagaatcatc aacacccgaa cgcatcagat
      481 taagcatatg ctgcgtgccg gtcaggtgca gggcttcgtc gcgggcaatc agtttgatga
      541 ttttggcgtt gccttccatc aactcgcgct cggcaaaagc aaacgagcag gcgaatgaaa
      601 cgtagaaacg gatggcttcc aacacgttga cgcacatcag gcagagatag agttttttct
      661 tcaacccgcg caaagacaca gtaatgggtt ttccgccgac attatgcatc ccttcgccca
      721 acaggttgta atactgggtg tattcgatta agtcatcgta atagcaggca atgtcttcgg
      781 cgcgggcggt aatgtattcg ttttcgacaa tatcatcaaa cacgaccgac ggatcattca
      841 caatattgcg gatgatgtgg gtatagctgc gcgagtgtat ggtttcgctg aagctccacg
      901 tttcaatcca cgtttccagc tcgggaatcg aaaccaaagg cagcaaggca acattcggac
      961 tgcgcccttg gatggaatcg agcagtgttt ggtatttcag attgctgatg aaaatatgtt
     1021 tttcgtgttc aggcaggttg gcgtagtcga tacggtcgcg cgacacgtcg atttcttccg
     1081 gccgccaaaa aaacgacaat tgtttttcaa tcagtttttc aaatacctcg tatttctgct
     1141 ggtcataacg ggcgacattc acaggctgac cgaaaaacat cggctcattc agcgcgtcgt
     1201 ttttggtttt gggaaaggtg ctgtatgaca tgactaggtg ttcgcaggac atggttttct
     1261 caggtttatt taaatttagg aatttggatt tcagacagcc ttatatgttt taagtaaggt
     1321 catctgaatg tatctgtaca ttgaattctt gccttaaata tcgctgttag ttataatctt
     1381 ccccaacaac tcccccaact ttgccaacct acgcggttgg agcaacaagg ttgggggctt
     1441 tcttttatcc ctgccacaat ctccagtctc gcggattatt ttccaaaccc atatcgcgca
     1501 aacttacagc ttcattcgcg acatcgggaa actcatccag taaagcaaga agacggtttc
     1561 cccattcggt tcgcggacaa ataacatcca acatccgttt catcaggcaa aaatacacaa
     1621 acggtttatt gataggcaat gatttccatt ctgcatcaga caaacctttc aagctggctt
     1681 taaaagtaat atccctattc cataatcgac tgtgatgtgc cgaaacgttg cggataaagt
     1741 taaatgcgtg cagatgtgtt tgcagatgct taccgtcttt caaacgatac aatttggcaa
     1801 tagagtcttt atctttattc aacatccctt tatacagcat agacatcgtg ccgaaatccc
     1861 atacttcgca ggctacccag acaggtaagt cggcataatg ttccaaatga tgtttaacaa
     1921 aaccggtttt cttttcgcgc tcgaccagcc tgttatacct atccagccat tccgcatggt
     1981 cgaaacctgt ggcagaatat ttgctatctt tgtaagccaa tgggtcatgc cgtcctaatg
     2041 tatgggcaat atttacccga agcgctactt caattctttc cagtgcatct aatgccaatt
     2101 gccgcaattt cttatcgaac atataaaggc ttttgacatc ttcaaaacga gtatctgtaa
     2161 taaactcatc caacctgctc ttagaacttt caggagcaaa ttgtcggaaa gagtaaaaat
     2221 aaccgcttaa tcggtaataa ccgatggtgc gtaaatatcc taatgccttt ttctcatcat
     2281 caatctgcaa tcctctactt cttagaatct ccaactgctc atcgtaagat ttccaaagct
     2341 tgaagccttt tatctgcttg ctttgcacag cctgtttcac tttcaaatag ttaaatctta
     2401 caagccccgc ccgcgcagcc gtcatcctga atatcggctt gcgtatcgtc cgcgccgtcg
     2461 cgggtgttgt ggtagtacag ggttttgacg ccgtatttgt aagcggtcaa taagtctttg
     2521 agcatttgtt tcatggaaac tttgctgcct tcgaatttgt tcgggtcgta ggcggtattg
     2581 gcggaaatcg attgatcgac gaatttttgc attacgccga caagtttcaa gtagccttcg
     2641 ttgccgggaa gctgccacag ggtttcgtag gcgtctttca gggtttcaaa ttccggtacg
     2701 acttgtttca aaataccgtc ttttgatgct ttgaccgtta ccaatccgcg cggcggctcg
     2761 ataccgttgg tggcgttggc gatttgcgaa ctggtttcag acggcatgag tgcggttaga
     2821 gtagagttac gcaggccgta tttgacgatt tcggcacgca ggctttccca gtcgtaatgc
     2881 aaaggctcgc cgcagacggc atccaaatct tttttgtagg tgtcgatggg cagtttgcct
     2941 tgcgaataaa cggtttggtt aaagagcgta cacgcaccgt attctttggc aaggtttgcc
     3001 gatgctttga gcaggtaata ctgtatggct tcaaaggtac ggtgggtcag accgagcgcg
     3061 gagccgtcgc tgtagcggac accgtttttc gccagataat aagcatagtt aatcacgccg
     3121 atgccgagcg aacggcggcc catagtagag gtacgcgcgg cttctaccgg atatccctga
     3181 taatctaaaa gtgcatcgag cgcacgaacg gtcaagtcgg caagcccttc caattcgtcc
     3241 aagctgttta atgcgcccaa gttaaaggca gacagtgtac acagggcgat ttcgccgttc
     3301 ggatcgttga tattgtccag cggtttggtc ggcagggcga tttccataca caagttggac
     3361 tgatgaacag gcgcgacgcg cggatcgaac gggctgtgcg tattgcagtg atcgacgttt
     3421 tgaatgtaga tgcgcccggt tccggcacgc tcctgcatca gcgtggaaaa caggtcggca
     3481 gccggaatga tgcgcttgcg gatatcaggg tcttgctcgt atttcgtata gagccgctca
     3541 aattcgtctt ggtcggcaaa aaacgcttcg tacaatcccg gaacctcgtt gggcgaaaac
     3601 agcgtaatgt tgccgccctt aatcaggcgg gtgtacagca ggcggttgat ttgcacgccg
     3661 taatcaagct gacggatacg gttgtcttcc acaccgcggt tgtttttcaa caccagcagg
     3721 ctttcggctt cgatatgcca caaggggtag aacaaggttg ccgcgccgcc gcgcacgccg
     3781 ccttgcgaac aggatttgac cgccgcctga aacattttaa agaagggaat gcagccggta
     3841 tgccgcgctt cgccgccccg gatttcgctg tccaaaccgc ggatacgtcc ggcattgatg
     3901 ccgatgcccg cacgctggga aacgtatttc acaatcgcgc tggtagtggc attgatggaa
     3961 tccaaactat cgtcgcattc aatcagcaca cagcttgaga actggcgcgt aggcgtacgc
     4021 acgccgctca taatcggagt cggcagcgat actttaaatg tagaaacggc atcgtaaaac
     4081 cgtttgacgt aacccaagcg cgcctctttc gggtatttgc tgaaaaggca catcgccacc
     4141 aaaacatata aaaactgcgg cgtttcgtaa atttggcggg taacgcggtt ctgtaccaga
     4201 tatttgcctt cgagctgttt gacagcggca taggaaaagg acatatcgcg ttcgtggtcg
     4261 atataggcgt tcagttcgtc aaattcttcg cggctgtaat cctcaaggat atgcctgtcg
     4321 tattttccgg catcggtaag ttttttaacg tggtcgtaaa ggtgcggcgg ctcgtactcg
     4381 ccgtaggcta ttttacgaag atggaaaatc gccaaacgcg cggcaaggta ttggtagtcc
     4441 ggggtatctt ccgaaattaa atcggcagcg gctttgatga tggtttcgtg gatgtcgtcg
     4501 gtgcggatgc cgttgtagaa ctggatgtgc gatttcaact cgacctgaga tacggaaaca
     4561 ttttccaatc cgtccgccgc ccaagtgacg acacggtgaa tcttatccaa atcaatggct
     4621 tctaatcttc cgtctcgttt ggttactttc aaatcagtcg gtgtattcat cgcttcctct
     4681 tccactcttg atattcaaga cacagtcttt tcaaataaat taaggcagac aatatagtgg
     4741 atttttggca ttttctccag tcttgacaac ggttgtattt ttcagtttca ggcaatgcgc
     4801 gataaaaccc gcctgtcgta ttttcctata atatttgttt tatctgataa ttctttaccg
     4861 ataaaaaacg ggtaaatttt ttgccttttg accggctccg gctacaaggc ggtgaaataa
     4921 ggattttccg acgaaaaagg aaagcttcct gttttctgcc cctgcaaatt gttaaatttt
     4981 gcaaagtatg attttgccgc gccgccgccg acaaattcca ttttcttacc gattggaatt
     5041 tattattgag attaatgtgt tatttgaatc tgcatatcaa acggcaagtt ttgtcggctg
     5101 aatgagtctg aaactgccga caatttgccc gttccatcct tccatcctat actggaaaga
     5161 atgacaaact gaaaggatcg tcatgtctgt caaaaagatg cttgccatac tgttgtctgc
     5221 aatattggga ctggtatcga caactgccgc tgccggtacg tcagaacccg cccaccgcga
     5281 taccaaacat atccgcaagg caaacaagca gatgctgcac cccgaatgca ggaaatattt
     5341 ggaacgccgt gccgcgtggt accgatcgca aggcaacgtg caggaattgc gcgaaaacaa
     5401 aaaggcgcgc aaagcattcc gctccctgcc ttatgcggaa cagaaaatcc aatgccgggc
     5461 ggcttatgag gctttcgatg atttcgacgg cggcagtttc cgccgttaat cccatataaa
     5521 atatgccgtc tgaacacagg ttcagacggc attttccata gatacaacaa actatcctta
     5581 cggcatttcg tttgaggtgc tcccgttgcc gcagcct
//
LOCUS       DAWGKF010000131         5586 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.131, whole genome shotgun sequence.
ACCESSION   DAWGKF010000131 DAWGKF010000000
VERSION     DAWGKF010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5586)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5586)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5586
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.131"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            72..998
                     /gene="fabD"
                     /locus_tag="WHR07_001646"
     CDS             72..998
                     /gene="fabD"
                     /locus_tag="WHR07_001646"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEZ2130839.1"
                     /translation="MSFAFFFPGQGSQSLGMMNGFAEHAIVKNTFAEASAILGQDLWA
                     MINGSDAEIIGQTVNTQPIMLAAGVAVYRAYLEAGGKTPAAVAGHSLGEYTALVAAGA
                     LNFADAVKLVRLRAELMQSAVPQGVGAMAAILGLEDEQVKQICAEAAQGEVVEAVNFN
                     SPGQIVIAGNAAAVGRAMAAAKEAGAKRALPLPVSVPSHCSLMKPAADKLAEALKTVE
                     IKQPQIRVIHNADVAAYDDADKIKDALVRQLYSPVRWTETVNALVSDGIAESAECGPG
                     KVLAGLAKRINKAAACSALTDAGQVAAFIEAH"
     gene            1136..3001
                     /gene="msbA"
                     /locus_tag="WHR07_001647"
     CDS             1136..3001
                     /gene="msbA"
                     /locus_tag="WHR07_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A export permease/ATP-binding protein
                     MsbA"
                     /protein_id="HEZ2130840.1"
                     /translation="MIEKLTFGLFKKEDARSFMRLMAYVRPYKIRIVAALIAIFGVAA
                     TESYLAAFIAPLINHGFSAPAAPPELSAAAGIISTLQNWREQFTYMVWGTENKIWTVP
                     LFLIILVVIRGICRFTSTYLMTWVSVMTISKIRKDMFAKMLTLSSRYHQETPSGTVLM
                     NMLNLTEQSVSNASDIFTVLTRDTMIVTGLTIVLLYLNWQLSLIVVLMFPLLSLLSRY
                     YRDRLKHVISDSQKSIGTMNNVIAETHQGHRVVKLFNGQAQAANRFDAINRTIVRLSK
                     KITQATAAHSPFSELIASIALAVVIFIALWQSQNGYTTIGEFMAFIVAMLQMYAPIKS
                     LANISIPMQTMFLAADGVCAFLDTPPEQDKGTLAPQRVEGRISFRNVDVEYRSDGIKA
                     LDGFNLDIRQGERVALVGRSGSGKSTVVNLLPRFVEPSAGNICIDGIDIADIKLDCLR
                     AQFALVSQDVFLFDDTLFENVRYSRPDAGEAEVLSALQAANLQSLIDASPLGLHQPIG
                     SNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERLMENRTGI
                     IVAHRLTTIEGADRIIVMDDGKIIEQGTHEQLMSQNGYYTMLRNISNKDAAVRTA"
     gene            3101..4666
                     /gene="guaA"
                     /locus_tag="WHR07_001648"
     CDS             3101..4666
                     /gene="guaA"
                     /locus_tag="WHR07_001648"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEZ2130841.1"
                     /translation="MTQDKILILDFGSQVTQLIARRVREAHVYCELHSFDMPLDEIKA
                     FNPKGIILSGGPNSVYESDYQADTGIFDLGIPVLGICYGMQFMAHHLGGEVQPGNQRE
                     FGYAQVKTIDSELTRGIQDGEPNTLDVWMSHGDKVSKLPDGFAVIGNTPSCPIAMMEN
                     AEKQFYGIQFHPEVTHTKQGRALLNRFVLDICGAQPSWTMPNYIEEAVAKIREQVGSD
                     EVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRLNEGKMVMDMFARNLGVKVI
                     HVDAEGQFMEKLAGVTDPEKKRKIIGAEFIEVFDAEEKKLTNAKWLAQGTIYPDVIES
                     AGAKTKKAHAIKSHHNVGGLPENMKLKLLEPLRDLFKDEVRELGVALGLPREMVYRHP
                     FPGPGLGVRILGEVKKEYADLLRQADDIFIQELRNTTDENGTSWYDLTSQAFAVFLPV
                     KSVGVMGDGRTYDYVVALRAVITSDFMTAHWAELPYSLLGRVSNRIINEVKGINRVVY
                     DVSGKPPATIEWE"
     gene            4728..5474
                     /gene="fabG"
                     /locus_tag="WHR07_001649"
     CDS             4728..5474
                     /gene="fabG"
                     /locus_tag="WHR07_001649"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HEZ2130842.1"
                     /translation="MSTQDLSGKIALVTGASRGIGAAIADTLAAAGAKVIGTATSESG
                     AAAISERLAQWGGEGRVLNSAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRM
                     KEEEWDDIMQVNLKSVFRASKAVLRGMMKQRAGRIINITSVVGVMGNAGQTNYAAAKA
                     GLIGFSKSMAREVGSRGITVNCVAPGFIDTDMTRALPEETRQTFTAQTALGRFGDAQD
                     IADAVLFLASDQAKYITGQTLHVNGGMLMP"
BASE COUNT         1348 a         1790 c         1370 g         1078 t
ORIGIN      
        1 ttttgtcccg cctgaatttt tcgtaaaact cgggcagaat acctgattat ccaaccaaac
       61 aaaggaatac tatgtctttt gccttctttt ttcccggaca aggttcccaa agcctcggta
      121 tgatgaacgg ctttgccgaa cacgccatcg tcaaaaacac ctttgccgaa gcctccgcca
      181 tattggggca ggacttgtgg gcgatgatta acggcagcga tgccgaaatc atcggacaaa
      241 ccgtcaatac ccagcccatc atgctcgccg ccggcgttgc cgtttaccgc gcctatttag
      301 aagcgggcgg caaaacgcct gccgccgttg ccggacacag cctcggcgaa tacaccgcac
      361 tcgttgccgc cggcgcattg aattttgccg acgcggtcaa actcgtgcgc ctgcgcgccg
      421 aactgatgca gtccgccgta ccgcaaggcg tgggcgcaat ggcggcgatt ctcggcttgg
      481 aagatgagca ggtaaaacaa atttgcgccg aagccgccca aggcgaagtg gtcgaagccg
      541 tcaacttcaa ctcacccgga caaatcgtga ttgcaggcaa tgccgccgcc gtcggacgcg
      601 ccatggctgc cgccaaagaa gccggtgcca aacgcgccct gccgctgccc gtgtccgtac
      661 cttcccattg cagcctgatg aaacccgccg ccgacaaact cgccgaagcc ctcaaaaccg
      721 tcgaaatcaa gcagccgcaa atccgcgtca tccacaacgc cgacgttgcc gcctacgatg
      781 atgccgacaa aatcaaagac gcgctcgtcc gccagcttta cagccccgta cgctggacgg
      841 aaaccgtcaa cgcccttgtt tcagacggca ttgccgaatc cgccgaatgc ggcccgggca
      901 aagtgttggc gggcttggca aaacgcatca acaaagccgc cgcgtgcagc gcactgaccg
      961 atgccggaca ggttgccgcc tttatcgaag cgcactgact tcgttctgca aaaagcagcc
     1021 tgccctcttc aggctgcttt tcatgtccga acggcggcag ccccatattt acgctataat
     1081 ccatcccgac caaaccaccg acagcggctg ccgttgcagt tcccgcccta ccgatatgat
     1141 agaaaaactg actttcggac tgtttaaaaa agaagacgcg cgcagcttta tgcgcctgat
     1201 ggcgtacgtc cgcccctaca aaatccgcat cgttgccgcc ctgattgcca ttttcggcgt
     1261 tgccgccacc gaaagctacc ttgccgcctt catcgccccc ctgattaacc acggcttttc
     1321 cgcacctgcc gcgccgcccg agctgtctgc cgccgccggc atcatttcca ccctgcaaaa
     1381 ctggcgcgaa cagtttacct atatggtttg ggggacggaa aacaaaatct ggaccgtccc
     1441 gctctttctc atcattctcg tcgtcatccg tggcatctgc cgctttacca gcacctatct
     1501 gatgacttgg gtctccgtga tgaccatcag caaaatccgc aaagatatgt ttgccaaaat
     1561 gctgaccctt tcctcccgct accatcagga aacgccgtcc ggcaccgtac tgatgaatat
     1621 gctcaacctg accgaacagt cggtcagcaa cgccagcgac atcttcaccg tcctcacgcg
     1681 cgacacgatg atcgttaccg gcctgaccat cgtcctgctt tacctcaact ggcagctcag
     1741 ccttatcgtc gtcctgatgt tccccctgct ctccctgctc tcgcgctact accgcgaccg
     1801 tctgaaacac gtcatttccg actcgcaaaa aagcataggc acgatgaaca acgtgattgc
     1861 cgaaacccat cagggacacc gcgtcgtcaa gctgttcaac gggcaggcgc aggcggcaaa
     1921 ccggttcgac gcgatcaacc gcaccatcgt ccgcctcagc aaaaaaatca cgcaggcaac
     1981 ggcggcacat tccccgttca gcgaactaat cgcctcgatc gccctcgccg tcgtcatctt
     2041 catcgccctg tggcaaagcc aaaacggcta caccaccatc ggcgaattta tggcattcat
     2101 cgtcgcgatg ctgcaaatgt acgcccccat caaaagcctt gccaacatta gcatccctat
     2161 gcagacgatg ttcctcgccg ccgacggcgt atgtgcattt ctcgacaccc cgcccgaaca
     2221 ggacaaaggc acgctcgcac cgcagcgtgt cgaagggcgc atcagcttcc gcaacgtcga
     2281 tgtcgaatac cgttcggacg gcatcaaagc cctcgacggc ttcaacctcg acatcagaca
     2341 aggcgaacgc gtcgccctgg tcggacgttc cggcagcggc aaatccaccg tcgtcaacct
     2401 gctgccccgc tttgtcgaac cgtctgccgg caacatctgc atagacggta tcgacatcgc
     2461 cgacatcaaa ctcgactgcc tgcgcgccca atttgccctc gtctcccaag acgtattcct
     2521 gtttgacgac accctgtttg aaaacgtccg atatagccgt cccgacgcgg gcgaagccga
     2581 agtcctatcc gccctccaag ccgctaacct gcaaagcctg atcgacgcat caccgctcgg
     2641 actgcaccag cccatcggat cgaacggcag caacttatcc ggcggacagc ggcaacgcgt
     2701 tgccattgcc cgcgccattt tgaaagacgc gccgatatta ttattggacg aagccaccag
     2761 cgcattggac aacgaatccg aacgcctcgt ccaacaggcg ctcgaacgcc tgatggaaaa
     2821 ccgcaccggc atcatcgtcg cccaccgcct gaccaccatc gaaggggccg accgcatcat
     2881 cgtaatggac gacggcaaaa tcatcgaaca aggcacacac gaacaactga tgtcccaaaa
     2941 cggctactac acgatgttac gcaatatctc aaacaaagat gccgccgtcc ggacggcata
     3001 aacaaaatgc cgtctgaaat ggtacaatcg ccccgaccct ttcagacggc atcatatccg
     3061 ccgacccatc cgattatctt caatcaccgt aaaacccatt atgacccaag acaaaatcct
     3121 catcctcgac ttcggttctc aagttaccca gctgattgcc cgccgcgtgc gcgaagccca
     3181 cgtttactgc gaactgcatt ccttcgatat gcctttggac gaaatcaaag ccttcaaccc
     3241 caaaggcatc atcctttccg gcggccctaa ttccgtttac gaatccgact atcaggccga
     3301 taccggtatt tttgatttgg gcattccggt tttgggcatc tgttacggca tgcagtttat
     3361 ggcgcaccac ttgggcggcg aagtgcagcc cggcaaccag cgcgaattcg gttatgcgca
     3421 agttaaaacc atagacagcg agctgacacg cggcattcaa gatggtgagc caaacacact
     3481 cgacgtatgg atgagccacg gcgacaaagt gtccaaactg cccgacggtt tcgccgtcat
     3541 cggcaacacc ccgtcctgcc cgattgccat gatggaaaac gccgaaaaac aattctacgg
     3601 catccagttc caccccgaag ttacccacac caaacaaggc cgcgccctgt tgaaccgctt
     3661 tgtcttggat atttgcggcg cgcaacctag ctggacgatg ccgaactaca tcgaagaagc
     3721 cgttgccaaa atccgcgaac aggtcggcag cgacgaagtg attttgggtt tgtccggcgg
     3781 cgtggactct tccgtagccg ccgcgctgat tcaccgcgcc atcggagacc aactgacctg
     3841 cgtgttcgtc gatcacggcc tcttgcgctt gaacgaaggc aaaatggtga tggatatgtt
     3901 cgcccgcaat ttgggtgtga aagtgattca cgtcgatgcc gaagggcagt ttatggagaa
     3961 actcgccggc gttaccgatc ccgagaaaaa acgcaaaatc atcggtgcgg aatttatcga
     4021 agtatttgat gctgaagaaa aaaaactcac caacgccaaa tggctggcgc aaggcacgat
     4081 ttaccctgac gtaatcgaat ccgcaggcgc gaaaaccaaa aaagcccacg ccatcaaatc
     4141 ccaccacaat gtcggcggcc tgcctgaaaa catgaagctc aagctgcttg agccgttgcg
     4201 cgatttgttc aaagacgaag tgcgcgaact gggcgtggct ttgggtctgc cgcgcgaaat
     4261 ggtgtaccgc catcccttcc ccggtcccgg tttgggcgtg cgcatcttgg gcgaagtgaa
     4321 aaaagaatac gccgacttat tgcgtcaagc agacgatatt tttattcaag aattacgcaa
     4381 caccaccgac gaaaacggca cgtcttggta cgacctgacc agccaagcct tcgccgtgtt
     4441 cctgcctgtg aaatccgtcg gcgtaatggg cgacggacgc acttacgact acgtcgtcgc
     4501 actgcgcgca gtcatcacca gcgactttat gaccgcacat tgggctgagt tgccttactc
     4561 actgctcgga cgcgtgtcca accgcatcat caacgaagtc aaaggcatca accgcgtggt
     4621 gtacgatgtc agcggcaaac cgcctgccac catcgagtgg gaataaccag caaacagggc
     4681 tgcaccgtcc ggcgcagtct ttcgattatc ggaaaaaagg aaaaaatatg agcacacaag
     4741 atttaagcgg caaaatcgct ttggtaacag gcgcctcgcg cggtatcggt gcagcaattg
     4801 ccgacacact ggcggcagcc ggtgccaaag tcatcggtac ggcgaccagt gagagcggtg
     4861 cggcggcgat tagcgagcgg ttggcgcaat ggggcggcga aggccgcgta ttaaattccg
     4921 ccgaacccga aaccgtcgaa aacctgattg ccgacatcga aaaaacgttc ggcaaactcg
     4981 atattctggt caacaacgcc ggcatcaccc gcgacaacct cctgatgcgt atgaaagaag
     5041 aagagtggga cgacatcatg caggtcaacc tcaaatccgt ctttcgcgcc tccaaagccg
     5101 tcttgcgcgg catgatgaag cagcgcgccg gccgtatcat caacatcaca tccgtcgtcg
     5161 gcgtgatggg caatgccggt caaaccaact atgccgcggc aaaagcaggc ttaatcggtt
     5221 tctccaaatc catggcgcgc gaagtcggca gccggggcat taccgtcaac tgcgtcgccc
     5281 ccggctttat cgataccgac atgacccgcg ccctgccgga agaaacccgc caaaccttta
     5341 ccgcccaaac cgccttgggc agattcggcg acgcgcaaga cattgccgat gcagtcttgt
     5401 tcttggcttc cgatcaggca aaatacatta ccggtcaaac gctgcacgtc aacggcggca
     5461 tgctgatgcc ctgacgggca gccgtaccga caatgccgtc tgaagccctt tcagacggca
     5521 tttgcattct caggcaaaat gaacacacgc cacaccccgc cctgcccctg cggatcaggc
     5581 acaagc
//
LOCUS       DAWGKF010000132         5535 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.132, whole genome shotgun sequence.
ACCESSION   DAWGKF010000132 DAWGKF010000000
VERSION     DAWGKF010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5535)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5535)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5535
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.132"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..77)
                     /locus_tag="WHR07_001650"
     CDS             complement(<1..77)
                     /locus_tag="WHR07_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ2130843.1"
                     /translation="MRKSRLSQYKQNKLIELFVAGVTART"
     gene            complement(383..1642)
                     /gene="rho"
                     /locus_tag="WHR07_001651"
     CDS             complement(383..1642)
                     /gene="rho"
                     /locus_tag="WHR07_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEZ2130844.1"
                     /translation="MHVSELQTLHISKLLELAEEHGIENANRFRKQDLVFAIVRQMMK
                     KGEGFTCSGTLEILPDGFGFLRSADTSYLAGPDDIYVSPTQIRRFNLHTGDTIEGSVR
                     VPKDNERYFALVRLDTINGDHPEVCRHKILFENLTPLFPTEQLKLERDLKSEENLTGR
                     AIDLISPIGKGQRALLVAPPKSGKTVMLQNIAHAVTANYPEVELIVLLIDERPEEVTE
                     MSRSVRGEVVSSTFDEPAQRHVQVAEMVLEKAKRMVEHKKDVVILLDSITRLARAYNT
                     VVPTSGKILTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVETGSRMDDVIYEE
                     FKGTGNMELHLDRRMAEKRLFPAININKSGTRREELLVPNDQLQRMWLLRKFLHPMDE
                     IEATEFLNGKIKASKNNDDFFELMRGK"
     gene            complement(1862..4246)
                     /gene="ppsA"
                     /locus_tag="WHR07_001652"
     CDS             complement(1862..4246)
                     /gene="ppsA"
                     /locus_tag="WHR07_001652"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HEZ2130845.1"
                     /translation="MADNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGG
                     FATTADAYRAFLAHNGLSERISAALAKLDVEDVAELARVGKEIRQWILDTPFPEQLDA
                     EIEAAWNKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNINGLENVKEAMHH
                     VFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVF
                     VTSSYGLGENVVQGAVNPDEFYVFKPTLKAGKPAILRKTMGSKHIKMIFTDKAEAGKS
                     VTNVDVPEEDRNRFSITDEEITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQAR
                     PETVKSQEEGNRNLRRFAINGDKTVLCEGRAIGQKVGQGKVRLIKDASEMDSVEAGDV
                     LVTDMTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATELLKNGQE
                     VTVSCAEGDTGFIYAGLLDVQITDVALDNMPKAPVKVMMNVGNPELAFSFANLPSEGI
                     GLARMEFIINRQIGIHPKALLEFDKQDDELKAEITRRIAGYASPVDFYVDKIAEGVAT
                     LAASVYPRKTIVRMSDFKSNEYANLVGGNVYEPHEENPMLGFRGAARYVADNFKDCFA
                     LECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCEL
                     PSNAVLAEQFLQYFDGFSIGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAIS
                     ACRKQNKYVGICGQGPSDHPDFAKWLVEEGIESVSLNPDTVIETWLYLANELNK"
     gene            4657..5478
                     /locus_tag="WHR07_001653"
     CDS             4657..5478
                     /locus_tag="WHR07_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase/pyrophosphorylase"
                     /protein_id="HEZ2130846.1"
                     /translation="MSSPRHVFYISDRTGLTAENIGEALLNQFGNLSFKRHTHPFVDT
                     PEKARAVVEKVNRSRQENGQRPIAFVSVVDDEIRRIIKGADAFQINFFETFLGLLEKE
                     LNTEATASEQGHHSIGNTKRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGK
                     TPTCLYLALQYGIRAANYPLIPDDLESADLPRMVKPYRDKLFGLTIQPERLQAIRQER
                     RPNSTYAKIDTCRSEVADAQSMFRRHGIPFANTTDKSVEELAVHILQACKLKRRF"
BASE COUNT         1159 a         1292 c         1625 g         1459 t
ORIGIN      
        1 gttcttgcag ttacacctgc gacaaacagt tcaatgagtt tattttgttt atactggctt
       61 agacgacttt ttctcatagg ggcaactcta acttaatttg aatttcccta gttatctagg
      121 acagccccaa atttatacaa aaatgagcgc ggttcggcgc aaccttgaat caagttcccg
      181 catcggtttt cattgccggt acggatgcgt tcaagccggt tttgcaaagg ccgcgctttc
      241 ggcaagcgga cacggacact gccgacggtt gcgccgttaa cggggggagg gaggagctgc
      301 gccgaccgtg tgaatgaaag tgccgtctga aacccgattt tcaggcttca gacggcattt
      361 cgcattaatg cgggcggcgc gtttatttgc cgcgcatcag ttcaaagaaa tcgtcgttgt
      421 ttttagaggc tttgattttc ccgtttaaga actcggtagc ttcgatttca tccatcgggt
      481 gcaggaactt gcgtaagagc cacatacgtt gcaactggtc gttcggcaca agcagctctt
      541 cgcggcgcgt gccggatttg ttgatgttga tggcggggaa gaggcgtttt tccgccatac
      601 ggcgatcaag gtgcaattcc atattgccgg tgcctttgaa ttcttcgtaa atcacatcgt
      661 ccatacggct gccggtttca accaatgcgg tggcgataat ggtcagcgaa ccgccttctt
      721 ccacgttgcg cgccgcaccg aagaaacgtt tggggcggtg cagcgcgttg gcatcgacac
      781 cgccggtcag gattttgccc gaggtgggga cgacggtatt gtaggcgcgg gcaaggcggg
      841 taatcgaatc cagcaggatg accacgtctt ttttgtgttc caccatacgc ttggcttttt
      901 caagcaccat ttcggcaact tggacatggc gttgagccgg ctcgtcaaag gtggaggaaa
      961 ccacttcgcc acggacggag cggctcattt cggttacttc ttcgggacgt tcgtcaatca
     1021 agaggacgat gagttcgact tcgggatagt ttgcggtaac ggcgtgggca atgttttgca
     1081 gcatcacggt tttaccgctt ttgggcgggg caaccaagag ggcgcgctga cctttgccga
     1141 tgggggaaat caggtcgatg gcgcgtccgg tcaggttttc ttcggacttt aagtcgcgtt
     1201 ccagcttcaa ctgttcggtc ggaaacagcg gggtcaggtt ttcaaacagg attttatggc
     1261 ggcatacttc cgggtggtcg ccgttgatgg tatcaagcct gaccagggca aaatagcgtt
     1321 cgttgtcttt tgggacgcgg acgctgcctt cgatggtgtc gcccgtatgc aggttgaagc
     1381 ggcggatttg ggtgggcgag acatagatgt cgtcggggcc ggcaagatag gacgtgtccg
     1441 cgctgcggag gaagccgaag ccgtcgggca ggatttcaag cgtgccggag caggtgaaac
     1501 cctcgccttt tttcatcatc tggcggacga tggcaaatac gaggtcttgt ttgcggaatc
     1561 ggttggcgtt ttcgatgccg tgttcttccg ccaattctaa gagtttggaa atgtgcaggg
     1621 tttgtaattc ggagacgtgc ataataatga tgtattttga agaggaaaaa gacaggcaga
     1681 tgccgtctga aagaagaagc tgaccgttgc cggttgctcg gggaaggggg aattgtaggc
     1741 agtcggcgcg tgggtgtcaa atattatcgc ggacggggca tcggcaggaa atgccgtctg
     1801 agcggagctg cttggaaaaa aatacccccg cgcttttcag gctcgggggt atgggcattg
     1861 attatttgtt caattcattc gccaaatata gccaagtttc gatgacggta tccgggttca
     1921 gggaaacgct ttcaatgcct tcctcaacca gccatttggc gaagtccgga tggtcggacg
     1981 ggccttgacc gcagatgccg acatatttgt tctgcttgcg gcaggcggag atggcaagat
     2041 gcagcatcac tttgacggca gggttgcgtt cgtcaaacga ttcggatacc aagccgctgt
     2101 cgcggtcgag accgagggtc agttgggtca tgtcgttcga gccgatggag aagccgtcga
     2161 agtattgcag gaattgttcc gccaataccg cgttgctcgg cagctcgcac atcataatca
     2221 ggcgcaggcc gtttttgccg cgttccaagc cgttttcttt cagggctttg acaacggctt
     2281 cggcttcgcc caaagtgcgg acgaacggaa tcatgatttc aacgttggtc agacccattt
     2341 cgtcacgaac gcgtttcaag gctttgcatt ccaaggcgaa acagtctttg aagttgtcgg
     2401 cgacataacg cgccgcgccc cggaagccca acatcgggtt ttcttcatgc ggttcgtata
     2461 cgttgccgcc gactaggttg gcgtattcgt tggatttgaa gtcggacata cggacgatgg
     2521 ttttacgcgg ataaaccgat gcggccaatg tcgccacgcc ttcggcgatt ttatcgacgt
     2581 agaagtcgac aggggacgcg taaccggcga tacggcgggt aatttccgct tttaattcgt
     2641 cgtcttgttt gtcaaattcc aacaaggctt tcgggtggat accgatttgg cggttgatga
     2701 taaattccat acgcgccaag ccgatgcctt cgctgggcag gttggcgaag ctgaatgcga
     2761 gttcggggtt gccgacgttc atcatgactt tgacgggtgc tttgggcata ttgtccaagg
     2821 cgacatcggt aatctgtacg tccaacaggc cggcatagat gaagccggta tcgccttcgg
     2881 cacaggatac ggtaacttct tgaccgtttt tcagcaattc ggttgcattg ccgcagccga
     2941 caacggcagg aatgcccagt tcgcgcgcga tgatggcggc gtggcaggta cggccgccgc
     3001 ggttggtcac gatggcggaa gcacgtttca tcaccggttc ccaatctggg tcggtcatgt
     3061 cggtaacgag tacgtcgccg gcttcgacgg aatccatctc ggaagcatct ttaatcaggc
     3121 gcaccttgcc ctgaccgact ttctgaccga tggcgcggcc ttcgcataat acggttttgt
     3181 cgccgttgat ggcgaagcgg cgcaggttgc ggttgccctc ttcttgggat tttacggttt
     3241 cgggacgggc ttgcaggatg tagagtttgc cgtccaagcc gtcgcgtccc cattcgatat
     3301 ccatcgggcg gccgtagtgt ttttcgatgg tcagtgcgta atgcgccaac tcggtgattt
     3361 cttcgtcggt aatggagaag cggttgcggt cttcttcggg gacatcgacg ttggttaccg
     3421 atttgccggc ttctgctttg tcggtaaaaa tcattttgat gtgttttgaa cccatggttt
     3481 tacgcaggat ggcgggtttg cctgctttca gtgtgggttt gaatacatag aattcgtcgg
     3541 ggttgaccgc gccttggacg acgttttcac ctagaccgta agaggaggta acaaagacga
     3601 cttgatcgta gccggattcg gtgtcgagag tgaacatcac gccggatgcg ccgctgtcgg
     3661 aacgcaccat gcgttgaacg ccggcggaaa gggcgacgat atcgtgttcg aagcctttgt
     3721 ggacgcggta ggaaatggcg cggtcgttgt acagggaggc gaatacatgg tgcatcgctt
     3781 ctttaacgtt ttccaatccg ttgatgttca agaaggtttc ctgttggccg gcaaatgatg
     3841 cgtcgggcag gtcttcggcg gttgcggaag agcgtacggc aacggaaatg tccgcaccgc
     3901 cggcatcggc aaccattttg ttccatgccg cttcgatttc ggcatcgagc tgttcgggga
     3961 agggcgtgtc caaaatccat tggcggattt ctttgccgac gcgtgccagt tcggcaacgt
     4021 cttcgacatc taattttgcc agtgcggcgg aaatgcgttc gctcagaccg ttgtgtgcga
     4081 ggaatgcgcg gtaggcatcg gctgtggtgg caaagccgcc ggggacgcga acgccttttt
     4141 cggtcagctg actgatcatt tcgcccagcg aggcgttttt accgcccacg cgttcaacat
     4201 ctgtcatacg caggttttca aaccagatta cgtagttgtc ggccatttgt gtgtccaatc
     4261 caaaatatgt taaaaaagaa acaaatccgc gtgcttattt taagcgattc gttcctctgc
     4321 tgtcatgtgt tttatccgtt ttaaaatcat gatgccgtct gaaaaattgc ggtttcggcg
     4381 tgtgtagcgg tttgaaactt gcagccggta tacttctttt tttgggtatt ttctttgtaa
     4441 aacaggtggt ttgaataggt taatgttttt tctgtttgat ttttttgttt attttttaaa
     4501 attttctgcc aaaaaatact ttatataaat aattttattt caaaattata ttgtgtctgt
     4561 ttgggtgtaa tccgaggtag gcgtgctgcg ggtgctttcc ttgtgtctgc cgctgctgtt
     4621 atgatgatat ttttattctg tatttaagga tggaagatga gcagtccgcg ccatgtgttt
     4681 tacatttccg accgtaccgg tctgactgcc gagaatatcg gcgaggcttt gctgaaccag
     4741 tttggcaatc tgtcgttcaa acgccatacg catccgtttg tcgatacgcc ggaaaaggcg
     4801 cgcgcggtgg tggagaaggt caatcggagc cggcaggaaa acggtcagcg tccgattgcg
     4861 tttgtcagtg tggttgatga cgaaatccgt cggattatca aaggggcgga tgcttttcag
     4921 attaatttct ttgagacttt tttgggactg ttggagaaag aactcaatac cgaagccacg
     4981 gcatccgagc aggggcatca cagtatcggt aatacgaagc gttacgatgc gcgtatggag
     5041 gcggtaaatt tctcattgaa ccacgatgac ggggtcagcg ataagaacct tcaggaagcg
     5101 gatgtaatct tgatgggtgt atcgcgttcg ggcaaaacgc cgacctgcct ttacctcgcc
     5161 ctgcaatacg gcatccgtgc ggcaaactat ccgctgattc ctgacgattt ggaatcggcc
     5221 gatctgccgc gtatggtcaa gccttatagg gataagctgt tcgggttgac catccagccg
     5281 gaacgtttgc aggccatccg ccaagagcgc cgcccgaatt caacttatgc caaaatcgat
     5341 acatgccgca gcgaggtggc agacgcgcag agtatgttca gacggcatgg gattccgttt
     5401 gcgaatacga cggataaatc agtggaagag cttgccgtac acatccttca ggcgtgcaag
     5461 ctcaaacgca ggttttgacg ggctttgatt cggtttgaag gcggaactgc cgtctgaaat
     5521 caggtttcag acggc
//
LOCUS       DAWGKF010000133         5525 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.133, whole genome shotgun sequence.
ACCESSION   DAWGKF010000133 DAWGKF010000000
VERSION     DAWGKF010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5525)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5525)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5525
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.133"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..489)
                     /locus_tag="WHR07_001654"
     CDS             complement(<1..489)
                     /locus_tag="WHR07_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130847.1"
                     /translation="MSSTISWDVSLIDALARRQAVVMLGAGVSRNSTNEHGMRPKTWK
                     DFLETCANQLDKPNVVKSLIDKNDFLTACELIKRSMARTKFDKLIKDEFNAGFVPAEI
                     HEEIFKLDQAIIISPNFDSIYETYARQKTNGSILVKSYKDKDIAKYIRGGDNRLIIKS
                     HGS"
     gene            complement(500..1501)
                     /locus_tag="WHR07_001655"
     CDS             complement(500..1501)
                     /locus_tag="WHR07_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEZ2130848.1"
                     /translation="MKSIGFFNNKGGVGKTTLLCNLAASLSIHFSKKVLVIDADPQCN
                     ASAYLLPENMLEDILMNDTESSIDKFYEPIRKGQGFPEKNPKIVRSDRFQIDLIVGNP
                     KLAIREDFIATDWNDTKNGEARGFQTTFAMAELFSRMSDYDFILIDMGPSLGALNRSI
                     LLSSDYFLMPISADIFSMMAISNIQISFDGWKEDLINALERYNKREGKKFTISNDIPF
                     EWKLDFLGYVRQQYKAKYSGGERQPVAAFERIINQQDEELKKLCLSFKHEDINSRKIG
                     EIHTLSSVIPLSQQAHAPIFELAASDGIVGGHYSRVAEAEEYFKKIAERFLENIGID"
     gene            complement(1580..4432)
                     /gene="uvrA"
                     /locus_tag="WHR07_001656"
     CDS             complement(1580..4432)
                     /gene="uvrA"
                     /locus_tag="WHR07_001656"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEZ2130849.1"
                     /translation="MCNHHPQHSHDNDTIRIRGARTHNLKNVDLDIPRHKLVVVTGLS
                     GSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTS
                     HNPRSTVGTVTEIHDYLRLLYARVGTPYCPEHKLPLSSQTVSQMVDAVLKLPEDTRVM
                     ILAPAVRERKGEFVDFFADLQAQGFARVRVDGEVYQLDEVPKLEKNIKHNIDVVIDRV
                     KVKADIKQRLAESFETALRHGNERALAMEMESGEEHWFSARFACPVCSYSLPELEPRL
                     FSFNNPMGSCPTCDGLGNTNFFDPEKVVAHPELSLATGAIDGWDKRNQFYFQMIQSLA
                     RHYGFDVQAAWETLPEKVKKVVLHGSGKEVIDFTYLSERGTTFNRSHAFEGIIPNLER
                     RYRETDSETVREKLREYQNHRACPSCGGARLRKEARYVYVSGEPLHEVSAWPLTKTHQ
                     FFETLDLDGNKKQIAEKILKEITERLGFLINVGLDYLNLSRSAETLSGGEAQRIRLAS
                     QIGSGPTGVMYVLDEPSIGLHQRDNDRLLATLKRLRDLGNSVIVVEHDEDAIREADFV
                     VDMGPGAGEHGGNVLIADTPENVAKCENSVTGQYLSGKKSIAVPSERTPVNPERMLVL
                     KGARGNNLKNVTLELPLGLITCITGVSGSGKSTLINDTLAKITARELNRAQEEPAPYD
                     DIRGLEHLDKVINVDQSPIGRTPRSNPATYTGLFTPIRELFAGVPLSRERGYNVGRFS
                     FNVKGGRCEACQGDGVIKVEMHFLPDVYVPCEVCHGKRYNRETLEIQYKGKNISQVLD
                     MTVEEAREFFDAVPTVSRKLQTLMDVGLGYIRLGQSATTLSGGEAQRVKLALELSKRD
                     TGRTLYILDEPTTGLHFADIALLLEVIDRLKGKGNSIVIIEHNLDVIKTADYIVDLGP
                     EGGDGGGRIIAEGSPEQVAKVKGSYTGKYLEVMLKY"
     gene            4587..5384
                     /locus_tag="WHR07_001657"
     CDS             4587..5384
                     /locus_tag="WHR07_001657"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HEZ2130850.1"
                     /translation="MNRLYPHPIIAREGWPIIGGGLALSLLVSMCCGWWSLPFWVFTV
                     FALQFFRDPAREIPQNPEAVLSPVDGRIVVVERARDPYRDVDALKISIFMNVFNVHSQ
                     KSPADCTVTKVVYNKGKFVNADLDKASTENERNAVLATTASGREITFVQVAGLVARRI
                     LCYTQAGAKLSRGERYGFIRFGSRVDMYLPVDAQAQVAIGDKVTGVSTVLARLPLTAP
                     QIESEPESEPALQTAPVETAANPSAEQRQIEAAAAKIQAAVQDVLKD"
BASE COUNT         1268 a         1250 c         1427 g         1580 t
ORIGIN      
        1 tgaaccgtga gattttataa ttaacctatt atctccgccc cgaatatact tagcgatatc
       61 tttatctttg tatgatttaa caagaataga gccgtttgtt ttttgtcttg catatgtttc
      121 ataaattgaa tcaaaatttg ggcttattat tatggcttga tcaagtttaa atatctcttc
      181 atgtatttca gcaggtacaa agccagcatt aaattcatct ttaattaatt tatcaaattt
      241 tgttctagcc atagatcgtt taattagctc gcaagctgtt aaaaaatcat ttttatcaat
      301 gagtgattta accacattgg gtttatcaag ttgattcgca caagtttcca agaaatcttt
      361 ccatgttttc ggtctcatgc catgttcatt tgttgaattt cttgatacac ctgcaccgag
      421 cataacaaca gcttgtctac gagctaaagc atctatgaga gacacatccc aacttatagt
      481 agatgacata atttcctctt taatcaatac ctatattttc caaaaatcgc tcagcgattt
      541 ttttaaaata ctcttctgcc tccgcaactc ttgaataatg tccccctaca ataccatcag
      601 atgcagctag ttcaaatata ggagcatgtg cctgctgtga tagtggtata acactactta
      661 atgtatgtat ttctccaatt tttctgctat tgatatcttc atgtttaaat gataggcata
      721 gtttttttaa ttcttcgtct tgttgattaa taattctttc aaaagctgca acaggctgtc
      781 tctccccacc tgagtatttg gctttgtatt gttgtctaac atatcctaag aaatctaatt
      841 tccattcaaa tggaatatca ttggagatgg taaatttttt accttctcgt ttattatacc
      901 tttcgagtgc atttatcaaa tcctctttcc atccatcaaa agaaatttgt atatttgaga
      961 ttgccatcat actaaaaata tcagcagaaa tcggcattaa aaaataatca gagcttagta
     1021 aaattgacct atttaaggca cctagtgatg gtcccatatc aatcaaaata aaatcgtagt
     1081 cactcattct gctaaatagc tcagccattg caaaagttgt ttgaaatcca cgagcctctc
     1141 cattttttgt gtcattccag tctgttgcga taaaatcttc cctgattgct aactttggat
     1201 ttccaactat taaatcaatt tggaaacgat cacttcttac aattttggga tttttttcag
     1261 gaaagccttg gccttttcta ataggctcat aaaatttatc aatactactt tcagtatcgt
     1321 tcattaatat atcttcaagc atattttctg gtagtaaata agctgaagca ttacactgtg
     1381 gatccgcatc aattactaaa acttttttac taaagtggat agataatgat gctgctaaat
     1441 tgcacaatag agtggttttg cccactcctc ctttgttatt aaaaaaacca atgcttttca
     1501 tgggatttta actttccaga aaaatgaaat cttgtaatta aatatttaat atttatagta
     1561 tatttggata gtatattgac taatatttta acataacttc caaatacttc ccggtataac
     1621 tccccttaac cttcgccacc tgctcgggac tgccttccgc aataatcctc cccccgccat
     1681 caccaccttc cggccctaag tccacaatat aatcagccgt ttttataacg tcaagattat
     1741 gctcgataat cactatcgag ttgcctttgc ctttcagacg gtctatgact tccagcagca
     1801 gggcgatgtc ggcgaagtgt aggccggtgg tgggttcgtc gaggatgtag agcgttctgc
     1861 cggtgtcgcg tttggagagt tccaaggcga gtttgacgcg ctgggcttcg ccgccggaga
     1921 gggtggtggc ggattggccg agacggatgt agcctaagcc tacgtccatc aaggtttgca
     1981 gtttgcgcga tacggtgggg acggcgtcga aaaattcgcg ggcttcttca acggtcatgt
     2041 cgaggacttg gctgatgttt ttgcctttgt attggatttc gagcgtttcg cggttgtagc
     2101 gtttgccgtg gcagacttcg cagggaacat acacgtcggg caggaagtgc atttcgactt
     2161 tgatgacgcc gtcgccttgg caggcttcgc agcggccgcc tttgacgttg aaggagaatc
     2221 tgccgacatt gtagccgcgt tcgcgcgaga ggggtacgcc ggcgaagagt tcgcggatgg
     2281 gggtgaacag gccggtgtag gtggcgggat tggagcgtgg ggtgcggccg atgggggatt
     2341 ggtcgacgtt gatgactttg tcgaggtgtt cgaggccgcg gatgtcgtcg tatggggcgg
     2401 gttcttcttg ggcgcggttg agttcgcggg cagtgatttt ggcgagggtg tcgttaatca
     2461 gggtggattt gccgctgccg gatacgccgg tgatgcaggt aattaaaccg agcggcagtt
     2521 cgagggtaac atttttgagg ttgttgccgc gcgcgccttt gaggacgagc attcgttcgg
     2581 gattgacggg cgtgcgttca gacggcacgg caatggattt tttgccgctg agatattgtc
     2641 cggtaacgga gttttcgcat ttggcgacgt tttcgggcgt gtcggcaatc aatacgttgc
     2701 cgccgtgttc gcctgcgccc gggcccatat cgacgacgaa atcggcttcg cggatggcgt
     2761 cttcgtcgtg ttcgaccacg atgacgctgt tgcccaaatc gcgcaggcgt ttgagggtgg
     2821 caagcaggcg gtcgttgtcg cgctggtgca ggccgatgga gggttcgtcc aaaacgtaca
     2881 tcacgccggt cgggccgctg ccgatttggc tggcgaggcg gatgcgctgg gcttcgccgc
     2941 cggaaagggt ttcggcggaa cgggagagat tcaggtaatc cagcccgacg ttaatcagga
     3001 agccgaggcg ttcggtgatt tctttgagga ttttttcggc gatttgtttt ttgttgccgt
     3061 ctaaatccag tgtttcaaag aattggtggg ttttggtgag cggccaggcg gaaacttcgt
     3121 gcaacggctc accgctgacg taaacgtagc gggcttcttt gcgcaaacgt gcgccgccgc
     3181 agctcgggca ggcgcggtgg ttttggtatt cgcgcagttt ttcgcgcacg gtttcgctgt
     3241 cggtttcgcg gtagcggcgt tcgagattgg ggatgatgcc ttcgaaggcg tggctgcggt
     3301 tgaaggtggt gccgcgttcg gataggtagg tgaaatcaat gacttccttg cccgagccgt
     3361 gcagcacgac ttttttgact ttttcaggca gcgtttccca agcagcctgc acatcgaaac
     3421 cgtaatgccg cgccagcgac tgaatcattt ggaaatagaa ctggttgcgc ttatcccagc
     3481 cgtcaatcgc gcccgttgcc agcgacaatt cgggatgcgc gaccactttt tcgggatcga
     3541 agaagttggt gttgcccaag ccgtcgcaag ttgggcagga gcccatcggg ttgttgaacg
     3601 aaaacaggcg cggctctaat tcgggcaggc tgtatgaaca tacgggacag gcgaaacgcg
     3661 cggaaaacca atgttcttcg ccgctttcca tttccatcgc cagcgcgcgc tcgttgccgt
     3721 ggcgcagtgc ggtttcaaaa ctttccgcca gccgctgctt gatgtccgcc ttcactttca
     3781 cgcggtcgat gaccacgtcg atattgtgct tgatgttttt ctccagcttc ggcacttcgt
     3841 caagctgata aacttcgccg tccacgcgca cacgggcaaa gccttgcgcc tgcaagtcgg
     3901 caaagaagtc gacaaactcg cccttacgct ctcgtaccgc cggcgccaga atcatcacgc
     3961 gcgtgtcttc cggcagtttt aagacggcat caaccatttg agatacggtt tggctggata
     4021 gcggcagctt gtgttcgggg cagtagggtg tgccgacgcg tgcgtacaaa aggcgcagat
     4081 agtcgtggat ttccgtaacc gtgccgacgg tggaacgcgg attgtggctg gtggatttct
     4141 gctcgatgga aatcgcgggc gacaggcctt cgatcaaatc gacatcgggt ttgtccatca
     4201 tctgcaaaaa ctgccgcgca taggcggaca ggctctcgac ataacgccgc tgtccttcgg
     4261 catacagcgt gtcgaacgcc agcgatgatt tgccgctgcc tgacaatcct gttaccacca
     4321 ccagcttgtg gcgcggaatg tctaaatcga cgtttttcaa attatgcgtg cgcgcgccgc
     4381 gtatgcggat ggtgtcgttg tcgtgcgaat gttggggatg atggttgcac ataatggatg
     4441 ccgcctgaaa aataaaggaa aaccgatatt gtagcacttt atcaaataac gtcttaagca
     4501 ggattcagac ggcatttgtc ggcggagtac ggcagattcc gctataatgt cggcaatttt
     4561 aacccgcttg aacaaaagga tgacaaatga accgtcttta cccccacccg attatcgccc
     4621 gtgagggctg gccgattatt ggcggcggtt tggctttgag cctgctggtg tcgatgtgtt
     4681 gcggctggtg gtctttgccg ttttgggtgt ttaccgtatt tgccctgcag tttttccgcg
     4741 accctgcgcg tgagattccg caaaatcctg aagcagtgtt gagtccggtt gacggccgta
     4801 tcgtggtggt cgagcgcgca cgcgatccgt atcgtgatgt cgatgctttg aaaatcagta
     4861 tttttatgaa cgtgttcaac gtgcattcgc aaaaatcgcc tgccgattgt acggtaacga
     4921 aagtggtcta taacaaaggc aaattcgtga atgcggattt ggacaaagcc agcacggaaa
     4981 acgaacgtaa tgcggtgttg gcgactacgg cttccggtcg tgaaattact tttgttcaag
     5041 tggccggttt ggtggcgcgc cgtattttgt gctacaccca agcaggtgcg aaactgtccc
     5101 gcggcgaacg ttatggcttt atccgcttcg gttcgcgcgt ggatatgtat ctgcctgtcg
     5161 atgcgcaggc gcaagtggcg attggcgata aagtaactgg cgttagcact gtattggcgc
     5221 gtttgccgct gactgcgccg caaatcgaat ccgagcctga gtctgagcct gctttacaaa
     5281 ctgctccggt tgaaacagcg gcaaacccat ctgccgaaca acggcaaatc gaggcagcgg
     5341 cggctaagat tcaggcggct gtgcaagatg tgttgaaaga ttaattttgc gaactgaaat
     5401 agaaaatatc agtaccatca ttcacacgaa tgaggaagtt tggttttttg aatttttgct
     5461 aatgttcaca ccgttatgtt cacgaaaatg ggaatctgga aatttaacgt tacggtgatt
     5521 tatca
//
LOCUS       DAWGKF010000134         5498 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.134, whole genome shotgun sequence.
ACCESSION   DAWGKF010000134 DAWGKF010000000
VERSION     DAWGKF010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5498)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5498)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5498
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.134"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..151)
                     /locus_tag="WHR07_001658"
     CDS             complement(<1..151)
                     /locus_tag="WHR07_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2061 domain-containing protein"
                     /protein_id="HEZ2130851.1"
                     /translation="MLKTLTFAALHFSTAFSITYVLTGSIGVSGAVALVEPLINTVVF
                     YSGLTK"
     gene            273..1226
                     /locus_tag="WHR07_001659"
     CDS             273..1226
                     /locus_tag="WHR07_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HEZ2130852.1"
                     /translation="MNQKKVVVLDADTLPGRTFHFDFPHELAVYGTTDAAETAGRVRD
                     AHIIITNKVMISADIIAHAPQLELIAVSATGVNNVDIGAAKAAGVAVCNVRAYGNESV
                     AEHAFMLMIALMRNLPAYQRDVAAGLWEKSPFFCHYGAPIRDLNGKTLAVFGRGNIGR
                     TLAGYAQAFGMGVVFAEHKHAPDVREGYVSFEDAVQTADVLSLHCPLNAQTENMIGEN
                     ELRQMKPGAVLINCGRGGLVDENALLAALKYGQIGGAGVDVLTEEPPRGGNPLLNARL
                     PNLIVTPHTAWASREALDRLFDILLANIHAFVKGEAQNRVV"
     gene            complement(1304..3358)
                     /gene="metG"
                     /locus_tag="WHR07_001660"
     CDS             complement(1304..3358)
                     /gene="metG"
                     /locus_tag="WHR07_001660"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEZ2130853.1"
                     /translation="MTRKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECY
                     YCCADDTHGTPVMLAAQKQGIAPEDMIAKVREEHLADFTDFGIGYDNYYSTHSPENKQ
                     FSQDIYRALKANGKIESRVIEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCG
                     TTYSPTELINPYSAVSGAKPELRESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQAE
                     ALNKMKEWLGEGEETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNL
                     CDRIGVDFDEYFKADSQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLT
                     VDGQKMSKSRGTFITAKSYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSD
                     LVGKYVNIAARASGFIAKRFESRLKDVADSALLAKLTAQSEAIAECYESREYAKALRD
                     IMALADIVNEYVDANKPWELAKQEGQDARLHEVCSELINAFTMLTAYLAPVLPQTAAN
                     AARFLNLDAITWANTRVTLGEHAINKYEHLMQRVEQKQVDDLIEANKQSIQTTPAPVE
                     DSKYEKVAEQAGFDDFMKIDMRVAKVLNCEAVEGSTKLLKFDLDFGFEKRIIFSGIAA
                     FYPNPAELNGRMVIAVANFAPRKMAKFGVSEGMILSAATADGKLKLLDVDAGAQPGDK
                     VG"
     gene            complement(3464..5302)
                     /gene="glmS"
                     /locus_tag="WHR07_001661"
     CDS             complement(3464..5302)
                     /gene="glmS"
                     /locus_tag="WHR07_001661"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEZ2130854.1"
                     /translation="MCGIVGAIRAHHNVVDFLTDGLKRLEYRGYDSSGIAVNTDGNIK
                     RVRRVGRVQLMEDAAREKHLNGSLGIGHTRWATHGGVTEPNAHPHISGGMIAVVHNGI
                     IENFESERKRLEDLGYRFESQTDTEVIAHSINHEYAQNGGRLFEAVQEAVKRFHGAYA
                     IAVIAQDKPDELVVARMGCPLLVALGDDETFIASDVSAVIAFTRRVAYLEDGDIALLA
                     SDGIKRLTDKNGLPAERKVKVSELSLASLELGPYSHFMQKEIHEQPRAIADTAEVFLD
                     GGFIPENFGKNAKSVFESIRSVKILACGTSYYAALTAKYWLESIAKIPADVEIASEYR
                     YRSVIADPDQLVITISQSGETLDTMEALKYAKSLGHRHSLSICNVMESALPRESSLVL
                     YTRAGAEIGVASTKAFTTQLVALFGLAVTLAKVRGLVSEEDEARYTEELRQLPGSVQH
                     ALNLEPQIAAWAQQFAKKTSALFLGRGIHYPIALEGALKLKEITYIHAEAYPAGELKH
                     GPLALVDENMPVVVIAPNDSLLDKVKANMQEVGARGGELFVFADLDSNFNATEGVHVI
                     RAPRHVGKLSPVVHTIPVQLLSYHVALARGTDVDKPRNLAKSVTVE"
BASE COUNT         1117 a         1332 c         1674 g         1375 t
ORIGIN      
        1 tttttgttaa tccactatag aaaacgacgg tgttgattag aggctcgacc agcgcgaccg
       61 cccccgatac gcctatactg cccgtcagta cataggttat actgaaggcg gtgctgaaat
      121 gcagtgcggc aaaagtcagg gttttaagca tcatcatctc tcggattgga cattgacgga
      181 gggatgataa agattatcat aaggctgtgc ggtttaaatt tgctatttgc tgttagtgta
      241 aataaatcat tttctaaata gggataaaaa ttatgaatca gaagaaagta gtcgtattgg
      301 atgcggatac tttacccggt cggacttttc acttcgattt cccacacgag cttgcggttt
      361 acggtacgac agatgctgcg gaaacggcag gacgggtgcg cgacgcgcat attatcatca
      421 ccaataaagt gatgatttca gcggatatca ttgcacacgc tccgcaactt gaattgattg
      481 ccgtcagtgc gaccggtgtg aacaatgtcg atattggggc ggcgaaggcg gcgggcgttg
      541 cggtatgcaa tgtccgcgcc tacggaaacg aatcggttgc ggaacacgcc tttatgctga
      601 tgattgcgtt gatgcggaat ttgcctgcct atcagcgtga tgttgcggca ggattatggg
      661 agaagtcgcc gtttttctgc cattacggcg cgccgattcg ggatttgaac ggtaaaacgc
      721 tggcggtttt cggacgtggc aatatcggac ggacgcttgc cggatacgcg caggcattcg
      781 gtatgggggt ggtgtttgcc gaacacaaac acgcgcccga cgtgcgcgaa ggctatgttt
      841 cctttgaaga tgcggtacag actgccgacg tgttgtcgct gcactgtccg ctaaacgccc
      901 aaactgaaaa tatgataggc gaaaacgaat tgcggcagat gaagcctggc gcggttttaa
      961 tcaattgtgg gcgcggcggg ctggtggatg aaaacgcgct gcttgccgca ctcaaatacg
     1021 ggcagatcgg tggggcgggt gtcgatgttt tgacggagga gccgccaagg ggcggcaatc
     1081 ccttgctgaa tgcacgcctg cccaatctga ttgttacgcc gcataccgcg tgggcgagcc
     1141 gcgaggcttt ggacaggctg tttgatatat tgttggcgaa cattcacgcc tttgtgaaag
     1201 gcgaggcaca aaatcgggtg gtttgagctt gtcgggatta tgggaaaaca atgccgtctg
     1261 aaggtctcaa gggtccagac ggcattgttt ttgatatttc tacttaaccg actttgtcgc
     1321 ccggttgcgc gcctgcgtcg acatcaagca gtttcagttt cccgtctgcc gtggcggcac
     1381 tcaaaatcat gccttcggat acaccgaatt tcgccatttt gcgcggggcg aagttggcga
     1441 cggcaatgac cattcttccg tttaactcgg cagggttggg gtaaaacgcg gcgatgccgg
     1501 agaagatgat acgtttttca aaaccgaaat cgaggtcgaa tttcaggagt ttggtgctgc
     1561 cttcgacggc ttcgcagttc aatactttgg cgacgcgcat atcgattttc ataaagtcgt
     1621 cgaaacccgc ctgttcggcg actttttcgt atttgctgtc ttcaacaggc gcgggggttg
     1681 tctgaatact ttgtttgttg gcttcgatta aatcgtccac ttgtttttgc tccactcgtt
     1741 gcattaaatg ttcgtatttg ttgatggcgt gttcgcccaa ggttaccctt gtgttcgccc
     1801 aagtaatcgc gtccagattg aggaaacgcg cggcgttggc ggcggtttgc ggcaacacgg
     1861 gggcgaggta ggcggtcaac atggtgaagg cgttgatgag ctcgctgcat acttcgtgca
     1921 ggcgtgcgtc ttggccttct tgtttcgcca gttcccaagg tttgttggca tcaacatatt
     1981 cgttgacaat gtctgccaat gccatgatgt cgcgcagggc tttggcgtat tcgcggcttt
     2041 cgtagcattc ggcaatggct tcgctttgcg cagtcagttt tgccagcaac gcgctgtcgg
     2101 caacgtcttt cagacggctt tcaaagcgtt tggcgataaa acctgacgcg cgggcggcga
     2161 tgttgacgta tttgcctacg aggtcgctgt tgacgcgcga gataaagtct tgcaggttca
     2221 aatcgatgtc ttcgattttg ctgttgagtt tggcggcgat gtagtagcgc atccactcgg
     2281 ggtttaaacc ttgttccaga taggatttag cggtgatgaa ggtgccgcgc gatttggaca
     2341 ttttttgtcc gtccacggtc aaaaagccgt gtgcgtacac gccggtcggg gcgcggtggc
     2401 cggagaagtg cagcatggca ggccagaaca gggcgtggaa atagaggatg tctttgccga
     2461 tgaagtggta catctcggtt tggctgtcgg ctttgaagta ttcgtcaaaa tcgacgccga
     2521 tgcggtcgca caggttttta aacgacgcca tgtagccgac gggcgcgtcc agccagacgt
     2581 agaagtattt gcccggcgcg tcggggattt caaagccgaa atacggcgcg tcgcgggaaa
     2641 tgtcccagtc ggacagcgtg gtttcttcgc cttcgcccag ccattctttc attttgttga
     2701 gggcttcggc ttgcagatgg ggcttgccgt cgtgcgggtt gttgccggaa gtccatgctt
     2761 tgaggaagtc ggcgcattcg cccagtttga agaagaagtg ttcggattcg cgcaattcgg
     2821 gtttcgcgcc ggaaacggcg gaatacgggt tgatcagttc ggtcggggaa taggtcgtgc
     2881 cgcagacttc gcagttgtcg ccgtattggt cttgggcgtg gcatttcggg cattcgcctt
     2941 tgacgaagcg gtcgggcagg aacatttgtt tttcggggtc gaaaagctgc tcgatgacgc
     3001 ggctctcaat cttgccgttg gctttcagcg cgcggtaaat gtcttgggaa aactgtttgt
     3061 tttcagggga atgggtgctg taataattgt cgtaaccgat gccgaaatcg gtaaagtcgg
     3121 cgaggtgctc ttcgcgcact ttggcaatca tgtcttcggg cgcgatgcct tgtttttgcg
     3181 cggcaagcat tacgggcgtg ccgtgagtgt cgtcggcgca gcagtagtag cattcgtggc
     3241 cgcgcagttt ttgaaagcgc acccaaacgt cggtttggat gtgttcgacc atatggccga
     3301 ggtggatgct gccgttggca tagggcaggg cggaggtaac gaggattttg cgtgtcatgg
     3361 tttatgcttt tggggataga tggtaaaggg gaattatacc gtaaatgccg tctgaagcct
     3421 gaaaaatcag gcttcagacg gcatgttcgc aaacaatccg gacttattcg accgtaacgg
     3481 atttcgccag gttgcgcggt ttgtctacat cggtgccgcg tgcgagggcg acatggtagg
     3541 aaaggagctg cacggggata gtatgcacga cgggggacag tttgccgacg tggcgcggtg
     3601 cgcggataac gtgcacacct tcggtggcat taaaattgct gtcgaggtcg gcaaagacga
     3661 aaagttcgcc gccgcgcgcg ccgacttcct gcatattggc tttgactttg tccaacaggc
     3721 tgtcgttggg tgcgatgacg acgacgggca tgttttcgtc caccaaggca agcggcccgt
     3781 gcttcagttc gccggcagga taggcttcgg cgtggatgta ggtgatttcc ttcagtttta
     3841 acgcgccttc gagggcaatc gggtaatgga tgccgcgccc caaaaacagc gcgctggttt
     3901 tcttggcaaa ctgttgcgcc caggcggcaa tttgcggttc gaggtttaaa gcgtgctgca
     3961 cgctgccggg aagctggcgg agttcttcgg tgtaacgtgc ttcgtcttct tcggaaacca
     4021 aaccgcgcac tttcgccagc gttaccgcca aaccgaacag cgcaaccagc tgcgtggtaa
     4081 atgctttggt tgaggcgacg ccgatttccg caccggcacg ggtataaagc acgaggctgc
     4141 tttcgcgcgg cagggcggat tccatcacgt tgcagatgga gaggctgtgg cggtgtccca
     4201 aggattttgc gtatttcaac gcctccatcg tgtccagcgt ttcgccggat tgggaaatgg
     4261 taatgaccag ttggtccgga tcggcaatca cgctgcggta tcggtattcg ctggcgattt
     4321 cgacatcggc cgggattttg gcgatggatt ccaaccaata tttggcggtc agcgcggcgt
     4381 aataggacgt gccgcaggca aggattttga cgctgcggat gctttcaaac acgcttttgg
     4441 cgtttttgcc gaagttttcg gggatgaagc cgccgtcgag gaaaacctcc gccgtgtctg
     4501 caatcgcgcg cggctgctca tggatttcct tttgcataaa gtggctgtac ggtcccagtt
     4561 ccaaagaggc gagcgagagt tcggatacct tgactttgcg ttcggcaggc aggccgtttt
     4621 tatcggtcag ccttttgatg ccgtctgaag ccagcagcgc gatgtcgccg tcttcgaggt
     4681 acgccacgcg gcgcgtaaag gcgatgacgg cggatacgtc cgaagcgata aaggtttcat
     4741 cgtcgcccaa agcgaccaaa agcgggcagc ccatacgcgc cacgactaat tcatcaggct
     4801 tgtcttgggc aataaccgcg atggcgtatg cgccgtggaa acgtttgacc gcttcctgca
     4861 cggcttcaaa cagcctgccg ccgttttgcg cgtattcgtg attgatgctg tgggcgatga
     4921 cttcggtatc cgtttgcgat tcaaaacggt atcccaaatc ttccaaacgt ttgcgttcgc
     4981 tttcaaagtt ttcgatgatg ccgttgtgca cgaccgcaat cataccgccg ctgatgtgcg
     5041 ggtgggcgtt cggctcggta acgccgccgt gtgtcgccca gcgcgtatgc ccgatgccca
     5101 aactgccgtt caaatgcttt tcacgcgccg catcttccat taactgcacg cgcccgacac
     5161 ggcgcacgcg cttgatgttg ccgtcggtgt tgacggcaat gcctgatgaa tcataacccc
     5221 ggtattcgag gcgtttgaga ccgtcggtca gaaaatcgac gacattgtga tgggcgcgga
     5281 tggcgccgac gataccgcac ataactgttc cttagtatcc ggttgaaaaa aaaacaggcg
     5341 cggacggctc ccgtgccgca ccttccgctt cggattataa accgcctccc gcgccggaaa
     5401 acagcaaaat gccgtctgaa ggcttgggct tgctcaaaaa agggagggat ttccccgcct
     5461 gaccgggatg ggcgttcaga cggcattgcc tgctgccg
//
LOCUS       DAWGKF010000135         5477 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.135, whole genome shotgun sequence.
ACCESSION   DAWGKF010000135 DAWGKF010000000
VERSION     DAWGKF010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5477)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5477)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5477
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.135"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            208..1641
                     /gene="lpdA"
                     /locus_tag="WHR07_001662"
     CDS             208..1641
                     /gene="lpdA"
                     /locus_tag="WHR07_001662"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEZ2130855.1"
                     /translation="MSQYDVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPA
                     LGGTCLNVGCIPSKALLQSSEHFHAAQHDFAEHGITVGDVKFDAAKMIERKDAIVTKL
                     TGGVKFLFQKNKVTSLFGAASFAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRP
                     LPQVAIDNVNVLDNEGALNLTEVPAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPT
                     FLAAADQQIAKEAFKYFTKEQGLSIELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFD
                     KLIVAIGRIPNTKGLNAEAVGLEKDERGFIKVDGECRTNLPNVWAIGDVVRGPMLAHK
                     ASDEGVAVAERIAGQKPHIDFNNVPFVIYTDPEIAWVGKTEEQLKAEGVEYKKGTSGF
                     GANGRALAMGKAKGTVKVLADAKTDRILGVHMIGPVVSELVTEGVTALEFFASSEDIA
                     RIIHAHPTLSEVVHEAALAADKRALHG"
     gene            1736..2023
                     /locus_tag="WHR07_001663"
     CDS             1736..2023
                     /locus_tag="WHR07_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130856.1"
                     /translation="MNKEIVGIFFIPMGIISMCMAALWQMYVMMTETYTLNRFKDKEL
                     VWRVALLFISFSLAVYLLCPNSRKKGIVFFILGGGGAAMYLLARMWLPFSK"
     gene            2122..3288
                     /gene="sucC"
                     /locus_tag="WHR07_001664"
     CDS             2122..3288
                     /gene="sucC"
                     /locus_tag="WHR07_001664"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HEZ2130857.1"
                     /translation="MNLHEYQAKELLASYGLPVQGGILAHNGEEAAAAYDKLGGKFAV
                     VKAQVHAGGRGKAGGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDM
                     YPVQTELYLGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQ
                     AREVAFQLGLKDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIG
                     IDSNALYRLPKIAELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDI
                     IKLKGGQPANFLDVGGGATKDRVVEAFKLILEDKSVQGVLINIFGGIVRCDMIAEAIV
                     AAVKEINVDVPVVVRLEGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAVNA"
     gene            3299..4189
                     /gene="sucD"
                     /locus_tag="WHR07_001665"
     CDS             3299..4189
                     /gene="sucD"
                     /locus_tag="WHR07_001665"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016655272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HEZ2130858.1"
                     /translation="MSVLINKDTKVLVQGFTGKNGTFHSEQALAYGTKVVGGVTPGKG
                     GQTHLNLPVFNTMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPT
                     LDMLKAKRYLETNGNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLT
                     YEAVAQTTKLGLGQSTCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEE
                     EAAEYIQSNVTKPVVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYT
                     RSPAELGTTMLEVLKAKGLA"
     gene            complement(4426..4755)
                     /locus_tag="WHR07_001666"
     CDS             complement(4426..4755)
                     /locus_tag="WHR07_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ2130859.1"
                     /translation="MDVQKQYSFETVAVCVLPNHIHAIWTLPPDDADYSLRWRLIKTK
                     FSAHFPHAENLSASKQRRHERGIWQRCFYEHTVRDETDLQHRADYIHSNPIKQRMSRA
                     KTESRKK"
     gene            complement(5102..>5477)
                     /locus_tag="WHR07_001667"
     CDS             complement(5102..>5477)
                     /locus_tag="WHR07_001667"
                     /inference="COORDINATES: protein motif:HMM:NF024685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SIR2 family protein"
                     /protein_id="HEZ2130860.1"
                     /translation="SNIIFTYLDYAQARVESAIFYEVLKSLALTHTFLFIGCGINDPD
                     IAIIFEDIRFAHGDDLPEHYMTIPKEEVDTDIMNLVSSMRNIHFCEYDSTDGHSQLTK
                     ALIDLRYAVEERRNEIAKNQKW"
BASE COUNT         1487 a         1282 c         1383 g         1325 t
ORIGIN      
        1 ttagatgtag cgtaatgtag tatcgtgcta caataggctc aacgaacgat tgaggccgtc
       61 tgaaacattt gattcgaatg aatcggcaga tatggacttt cagacggctt tttcttaaaa
      121 ccatcaaaac gcagtcattc aaaataaaaa agaaacgaaa agtatcgttt ttattttgag
      181 atactgctaa aagcaaagga tgacacgatg tctcaatatg atgtagtagt gattggtgca
      241 ggtccgggcg gatacgttgc cgccatccgt gccgcacaac tgggtttcaa aactgcctgt
      301 gtcgatgcag gcgttaacaa agcaggcaat gcccctgcct tgggcggtac ttgcttgaac
      361 gtaggttgta tcccttctaa agccctgttg caatccagcg aacatttcca cgctgcgcaa
      421 cacgattttg ccgaacacgg tatcactgtc ggtgacgtaa aattcgacgc ggccaaaatg
      481 attgagcgca aagatgccat cgtgaccaaa ctgaccggcg gcgtgaaatt cctgttccaa
      541 aaaaataaag taaccagtct gttcggtgcg gcttcctttg ccggtaaaaa tggcgatgct
      601 taccaaatcg aagtcgataa caaaggagag aaaaccgtta tcgaagccaa acacgtcatc
      661 gtagcgaccg gttccgtacc gcgtccgctg ccacaagtcg ctatcgacaa tgtgaacgta
      721 ttggacaacg aaggcgcatt gaacctgact gaagtacctg ccaaactcgg cgtgatcggt
      781 tccggtgtga ttggtttgga aatgggttcc gtatggaacc gcgtgggtgc ggaagttacc
      841 attcttgaag ccgcgccgac cttcctggct gccgccgacc aacaaatcgc caaagaagcc
      901 ttcaaatact tcaccaaaga gcaaggtctg agcatcgaat tgggcgtgaa aatcggcgac
      961 atcaagtctg aaggcaaagg tgtttccgtt gcttacgaaa ctgctgctgg cgaagccaaa
     1021 accgaagtat tcgacaaact gatcgttgcc atcggccgta ttccaaacac caaaggcctg
     1081 aacgcggaag ccgtaggctt ggaaaaagac gagcgcggct ttatcaaagt agatggcgaa
     1141 tgccgtacca acctgcctaa cgtatgggca atcggcgacg tggttcgcgg cccgatgttg
     1201 gcacacaaag ccagcgacga aggcgttgcc gttgccgaac gcattgccgg tcaaaaaccg
     1261 catatcgact tcaacaacgt accgttcgtg atttacaccg atcctgaaat cgcttgggtg
     1321 ggtaaaaccg aagagcagct caaagccgaa ggcgtggagt acaaaaaagg tacttcaggt
     1381 tttggtgcga atggtcgcgc attggcaatg ggcaaagcca aaggtacggt taaagtgttg
     1441 gcagacgcca aaaccgaccg catcttgggc gtacacatga ttggtccggt tgtcagcgaa
     1501 ttggttaccg aaggcgtgac tgcgctcgaa ttcttcgcca gcagcgaaga catcgcccgc
     1561 attatccatg cccacccaac cttgtccgaa gtggttcacg aagctgcatt ggcggccgac
     1621 aaacgcgctt tgcacggttg atagacatta aggccttcga caaattgaat gttccgagag
     1681 ctccgttttc tgatttataa ttccgtcaga caaacaaaca gcatttacat tcgttatgaa
     1741 caaagaaata gtcggtattt tctttatacc gatgggcatc atcagcatgt gtatggccgc
     1801 attgtggcag atgtatgtga tgatgaccga aacttatacg ctcaaccgtt tcaaagataa
     1861 agaattggtt tggcgcgtgg cattgttgtt tatcagtttc agccttgccg tttatctgct
     1921 ctgtccgaat tcgcgtaaaa aaggcatcgt cttttttatt ctcgggggag gcggtgcagc
     1981 catgtatctg ctggcgcgga tgtggttgcc tttcagcaag tgaaacgacg attttccgac
     2041 cgccgaaagg tagtctgaaa cgcacgggct tgccatttgg aggcaaactc ggggcattcc
     2101 actaatctaa aggagaaatc catgaattta cacgagtatc aggctaaaga actgctggct
     2161 agctacggtt tgcccgtaca aggcggtatt ttggcacaca acggcgaaga agccgctgca
     2221 gcttacgaca aattgggcgg caaattcgct gttgtcaaag cacaagtaca cgccggcggc
     2281 cgcggtaaag cgggcggcgt aaaagtcgtt aaaagccgcg aagaagctaa agaagtggct
     2341 gaaagcctga ttggcaccaa cttggtaact taccaaacgg atgccaacgg ccaacctgtc
     2401 aacagcgttt tggtttgtga agatatgtat ccggttcaaa ccgagctgta cttgggcgca
     2461 gtggttgacc gttctacccg ccgcgttaca ttcatggctt ctacagaagg tggcgtagaa
     2521 atcgaaaaag ttgctgccga aactccagaa aaaatcttca aagtaaccgt tgatccgctg
     2581 gtcggcctgc aaccttgcca agctcgcgaa gttgccttcc aactgggctt gaaagacaaa
     2641 caaatcaacg agttcgtcaa actgatgacc ggcgcgtaca aagcgtttgt cgaaaacgac
     2701 ttcgccctgt ttgaagtcaa cccgctggca gttcgcgaaa acggcgcgct ggcctgcgtg
     2761 gacggcaaaa tcggcatcga cagcaacgcg ctctaccgcc tgccgaaaat cgccgaattg
     2821 cgcgacaaat ctcaagaaaa cgaacgtgaa ctgaaagctt ctgaattcga cctgaactat
     2881 gttgccctgg aaggcaacat cggctgtatg gttaacggtg ccggtttggc gatggccacc
     2941 atggacatca tcaaactcaa aggcggtcaa cctgccaact tcttggacgt tggcggcggc
     3001 gcaaccaaag accgcgtggt tgaagcgttc aaactgattt tggaagacaa atccgttcaa
     3061 ggcgtattga tcaacatctt cggcggtatc gtacgttgcg acatgattgc ggaagccatc
     3121 gtggcagccg ttaaagaaat caacgtcgac gttcctgtcg ttgttcgttt ggaaggcaac
     3181 aacgccgaac tcggcgcgaa aatcctgaac gaatcaggtc tgaaactgac ttctgcagac
     3241 ggcctgaatg acgcagccga aaaaattgtt gcagccgtaa acgcctaagg agaaaagaat
     3301 gagcgtattg attaataaag acaccaaagt attggttcaa ggtttcaccg gtaaaaacgg
     3361 tactttccac tccgaacaag ctctggctta cggcactaaa gttgtcggcg gcgttacccc
     3421 gggcaaaggc ggtcaaaccc acctgaacct gcctgtattc aacaccatga aagaagcggt
     3481 taaagaaacc ggcgctgacg catctgtaat ttacgttccc gctccgtttg tattggattc
     3541 tatcgttgaa gcagttgatt caggcgtagg cttggttgtt gtgattaccg aaggcgtgcc
     3601 aactctggac atgcttaaag ccaaacgtta cttggaaacc aacggcaacg gtactcgctt
     3661 ggttggccct aactgcccgg gcgtgattac tccgggtgag tgcaaaatcg gtattatgcc
     3721 gggccacatc cacactccgg gccgcatcgg tattatttcc cgttccggta cattgactta
     3781 cgaagccgtg gcacaaacca ccaaactggg cttgggtcaa tcaacctgta tcggtatcgg
     3841 cggcgacccg attcctggta tgaaccaaat cgacgcactg aaactcttcc aagaagaccc
     3901 agataccgac gccatcatca tgattggtga aatcggcggt actgcggaag aagaagcagc
     3961 cgaatacatc caatccaacg taaccaaacc tgttgtaggt tacattgctg gtgttaccgc
     4021 tcctaaaggc aaacgtatgg gccacgccgg tgcgattatt tccggcggta aaggtactgc
     4081 cgaagaaaaa ttcgccgctt tcgaaaaagc cggtatcgcc tatactcgca gccctgccga
     4141 gttgggcact actatgctgg aagtgttgaa agcaaaaggt ttggcataat caggtttgac
     4201 aactgattga acatcaaatg ccgtctgaaa ccggaaatcg ggtttcagac ggcattttgt
     4261 ttgtcatttc aaaaagaggc agcctcaaca tacccacatt attttttgcc ctttgaggca
     4321 gtcagaatat ttatcggtca aacaggagca aacccgtaag tcaggttgca cacgccttgt
     4381 ttgaagtccg ggaatggata agtatcgcat ttgaaaagac taatattatt ttttgcggga
     4441 ttctgtttta gcacgcgaca ttctttgttt gataggattg gaatggatgt agtccgcacg
     4501 atgctgcaaa tccgtttcat cgcgcacggt gtgttcgtaa aaacaccgtt gccaaatacc
     4561 gcgttcgtgc cgccgctgtt tgctggcaga caggttttcg gcatgaggga aatgtgcgga
     4621 gaatttggtt ttaatcagcc gccagcgcag ggaataatcc gcatcgtcgg gtggcagcgt
     4681 ccaaatggcg tggatatggt tcggcagcac gcatacggcg acggtttcaa aggaatattg
     4741 tttttgcaca tccatataag ccgcccgcga agtcgatatg ttcgacaagc aggcgcgatt
     4801 ttggatcggc gagtttgacg gtgaaaaaga atgtgccgcc ggcaatgaag tttctgcgat
     4861 aacgcgccat aggatttttg tttttggttt gagcgttgga gaaggaatgg cttgttgttt
     4921 aaggttttta acttcgttga agctagcgct ttcagacgac attggaggcc gtctgaaagc
     4981 gctagcttca acaaagttga aacggcaaac tgtcaatcaa gcaaccgcgt gcgtgcgtac
     5041 cgcacacacc ctacgcatgg ggtttagatt ttatacaggc tacggcttgc ttttcgatcg
     5101 attaccattt ttgattttta gcaatttcat ttcgtcgttc ttctactgca taacgaagat
     5161 caatcaacgc tttagtcaat tgactgtgtc catcagtaga atcatattca caaaaatgta
     5221 tgtttctcat ggagctgact agattcatta tatcagtatc aacttcttcc ttggggattg
     5281 tcatgtaatg ctcaggcaaa tcatctccgt gtgcgaatcg aatgtcttca aaaataatcg
     5341 ctatatctgg gtcattaatg ccacagccaa tgaataaaaa agtatgggta agtgcaagtg
     5401 attttaatac ttcataaaag atggcagatt caactcgtgc ttgagcataa tctaagtagg
     5461 taaaaattat attagaa
//
LOCUS       DAWGKF010000136         5403 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.136, whole genome shotgun sequence.
ACCESSION   DAWGKF010000136 DAWGKF010000000
VERSION     DAWGKF010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5403
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.136"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            81..1046
                     /locus_tag="WHR07_001668"
     CDS             81..1046
                     /locus_tag="WHR07_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ2130861.1"
                     /translation="MLRLTALTLCTVLALGACSPKDSDSAPQAKEQAVSAAQSEGASV
                     TVKTARGDVQIPQNPERIAVYDLGMLDTLSKLGVKTGLSVDKNRLPYLEEYFKTTKPA
                     GTLFEPDYETLNAYKPQLIIIGSRAAKAFDKLNEIAPTIEMTADTANLKESAKERIDA
                     LAQIFGKKAEADKLKAEIDASFEAAKTAAQGKGKGLVILVNGGKMSAFGPSSRLGGWL
                     HKDIGLPAVDEAIKEGSHGQPISFEYLKEKNPDWLFVLDRSAAIGEEGQAAKDVLNNP
                     LVAETTAWKKGQVVYLVPETYLAAGGAQELLNASKQVADAFNAAK"
     gene            1064..1213
                     /locus_tag="WHR07_001669"
     CDS             1064..1213
                     /locus_tag="WHR07_001669"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130862.1"
                     /translation="MPSETRMQTASCVSDGIARYGGFKQGFPLRRFGLPCLNLLRLNA
                     FPFCL"
     gene            1210..2178
                     /locus_tag="WHR07_001670"
     CDS             1210..2178
                     /locus_tag="WHR07_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ2130863.1"
                     /translation="MTAKPFSLNLTNLLLLAVLFAVSLSVGVADFRWSDVFSLSDSQQ
                     VMFISRLPRTFAIVLTGASMAVAGMIMQILMRNRFVEPSMAGAGQSAALGLLLMSLLL
                     PAAPLPVKMSVAAVAALIGMLVFMMLIRRLPPTAQLMVPLVGIIFGGVVEAVATFIAY
                     ENEMLQMLGVWQQGDFSGVLLGRYELLWATGILALFAYLIADRLTILGLGETVSVNLG
                     LNRTAILWSGLIIVALITSLVIVTVGNIPFVGLVVPNIISRLIGDRLRQSLPAVALLG
                     ASLVLLCDIIGRVIVFPFEIPVSTVFGVLGTALFLWLLLRKPAYAV"
     gene            2168..3142
                     /locus_tag="WHR07_001671"
     CDS             2168..3142
                     /locus_tag="WHR07_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HEZ2130864.1"
                     /translation="MPSEKNIGFMAGSSRPLWVAFALLLVSCVLFMTLNVKGDWDFVL
                     QLRLTKLAALLMVAYAVGVSTQLFQTLTNNPILTPSILGFDSLYVFLQTLLVFTFGGV
                     GYASLPLTGKFGFELVVMMGGSLLLFYTLIKQGGRDLSRMILIGVIFGILFRSLSSLL
                     SRMIDPEEFTAAQANMFAGFNTVHSELLGIGALILLVSAAVVWRERYRLDVYLLGRDQ
                     AVNLGISYTRNTLWILLWIAALVATATAVVGPVSFFGLLAASLANHFSPSVKHSVRLP
                     MTVCIGGILLVGGQTVFEHLLGMQAVLSVVVEFAGGLVFLYLVLKHKK"
     gene            3186..3812
                     /locus_tag="WHR07_001672"
     CDS             3186..3812
                     /locus_tag="WHR07_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130865.1"
                     /translation="MTQEHFPSFFNQAPTITVQDALAEFLGAAENGILTYRYADAVRL
                     CGHSCPTVAGAYLMVIKGLKALYGEELPERGGIEAFMQGARDEGTVGVTASVVQLLTG
                     AAPETGFGGIGMQGRFARRHLLSFGVGEINGTLTLRRKDNGKTVAVSLNAALQPFAPE
                     MRELMPKAVGGSASADELKQFGELWQERVRAFLIDQADNPEFVTVSEI"
     gene            3892..4650
                     /locus_tag="WHR07_001673"
     CDS             3892..4650
                     /locus_tag="WHR07_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ2130866.1"
                     /translation="MITIRNVSFHIGTCPILDNISLDIPEGGITALIGPNGAGKSTLF
                     SFMARLRPLESGSIAYRGKNLAGTPTAELARTLSILTQENSIMSRITVRDLLMFGRYP
                     YHQGRPTAECRRIVNGAIEEFHLQDLSDRYLTELSGGQRQRAMIAMVFCQSTDYVLLD
                     EPLNNLDMYHARSLMQILQKLTREHKRTTVAVLHDINQAAAYADHVVAMKNGKVALTG
                     TPEEVFTVHNIKELFDMDVDVLDYEGKKLIVHHI"
     gene            4958..>5403
                     /locus_tag="WHR07_001674"
     CDS             4958..>5403
                     /locus_tag="WHR07_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HEZ2130867.1"
                     /translation="MKHFPSKVLTTAILATFCSGALAATNDDDVKKAATVAIAAAYNN
                     GQEINGFKAGETIYDIDEDGTITKKDATAADVEADDFKGLGLKKVVTNLTKTVNENKQ
                     NVDAKVKAAESEIEKLTTKLADTDAALDATTNALNKLGENITTFAE"
BASE COUNT         1254 a         1531 c         1374 g         1244 t
ORIGIN      
        1 tatcatttat cctttctaga gccgttccgg tttgtccgac cggcggcttt gccccaatat
       61 ccccattttg gagacaccct atgttgcgtt tgaccgcatt gaccctctgc accgtcctcg
      121 ccttgggcgc gtgttcgccg aaagattccg actctgcccc acaagccaaa gaacaggcag
      181 tttccgccgc acaatccgaa ggcgcgtccg ttaccgtcaa aaccgcgcgc ggcgatgttc
      241 aaataccgca aaaccccgaa cgcatcgccg tttacgattt gggtatgctc gacaccttga
      301 gcaaactggg cgtgaaaacc ggtttgtccg tcgataaaaa ccgcctgccg tatttagagg
      361 aatatttcaa aacgaccaaa cctgccggaa ctttgttcga gccggattac gaaacgctca
      421 acgcttacaa accgcagctc atcatcatcg gcagccgcgc agccaaagcg tttgacaaat
      481 tgaacgaaat cgcgccgacc atcgaaatga ccgccgatac cgccaacctc aaagaaagtg
      541 ccaaagagcg tatcgacgcg ctggcgcaaa tcttcggcaa aaaggcggaa gccgacaagc
      601 tgaaggcgga aatcgacgcg tcttttgaag ccgcgaaaac tgccgcgcaa ggcaaaggca
      661 aaggtttggt gattttggtc aacggcggca aaatgtccgc cttcggtccg tcttcacgct
      721 tgggcggctg gctgcacaaa gacatcggtt tgcccgctgt tgacgaagcc atcaaagaag
      781 gcagccacgg tcagcctatc agctttgaat acctgaaaga gaaaaatccc gactggctgt
      841 ttgtcctcga ccgaagcgcg gccatcggcg aagagggtca ggcggcgaaa gacgtgttga
      901 ataatccgct ggttgccgaa acaaccgctt ggaaaaaagg acaggtcgtg tacctcgttc
      961 ctgaaactta tttggcagcc ggtggcgcgc aagagctgct gaatgcaagc aaacaggttg
     1021 ccgacgcttt taacgcggca aaataatgaa acggcggcat tcgatgccgt ctgaaacacg
     1081 gatgcaaacc gcctcctgtg tttcagacgg cattgcccga tacggaggct tcaaacaagg
     1141 ctttccgctc cgacggttcg gactgccttg tttgaatctt ctacgcctta acgcttttcc
     1201 cttctgttta tgactgccaa acctttttcc ctcaacctga ccaacctgct gctgctggcg
     1261 gtgttgtttg ccgtcagcct gtcggtgggc gttgccgatt tccgctggtc tgatgtgttt
     1321 tcactgtccg acagccagca ggtcatgttc atcagccgcc tgccgcgcac gtttgcgatt
     1381 gtgctgacgg gcgcgtcgat ggcggtggcg gggatgatta tgcagatttt gatgcgtaac
     1441 cgttttgtcg agccttctat ggcgggcgcg ggtcagagtg cggctttggg tttgcttctg
     1501 atgtccctgc tgctgcctgc cgcgccgctg ccggtcaaaa tgtcggttgc cgccgttgcc
     1561 gcgttaatcg ggatgttggt gtttatgatg cttatccgcc gcctgccgcc gacggcgcaa
     1621 ctgatggtgc ctttggtcgg gattattttc ggcggcgtgg ttgaggcggt ggccaccttt
     1681 attgcgtatg aaaacgaaat gctgcaaatg ctgggcgtgt ggcaacaggg cgatttttcc
     1741 ggcgtgttgc tcggacggta tgaactgttg tgggcaacgg ggattttggc tttgtttgcc
     1801 tatttgattg ccgaccggct gacgattttg ggtttgggcg aaacggtaag cgtgaacttg
     1861 gggctgaacc ggacggcgat tctgtggtcg gggctgatta ttgtggcttt gattacgtcg
     1921 ctggtcatcg ttacggtcgg caatattccg tttgtcgggc tggtcgtgcc gaacatcatc
     1981 agccgcctga taggcgacag gctgcgccaa agcctgcctg cggtggcttt gttgggcgcg
     2041 tctttggtgt tgctgtgcga cattatcgga cgcgtgattg tgtttccgtt tgaaattccg
     2101 gtctctacgg tttttggtgt attgggtacg gctttgtttt tgtggctttt gttgaggaaa
     2161 cccgcctatg ccgtctgaaa aaaatatcgg ttttatggca ggaagcagcc gcccgttgtg
     2221 ggtcgccttt gcgctgttgc tggtttcctg cgtcctgttt atgacgctca acgtcaaagg
     2281 cgattgggat tttgttttgc aactgcggct gaccaaactt gccgcgctgc tgatggtcgc
     2341 ctatgcggtc ggcgtgtcca cgcaactctt ccaaacgctg accaataatc cgattctgac
     2401 cccttcaatt ttgggtttcg attcgctgta tgtgtttttg cagaccttgc tggtgtttac
     2461 gttcggcggc gtgggctatg cttccctgcc gttgacgggc aaattcggct ttgaactggt
     2521 cgtcatgatg ggcggctcgc tgctgctgtt ctacacgctc atcaaacagg gcggacgcga
     2581 tttgtcgcgc atgattttaa tcggcgtgat tttcgggatt ttgttccgca gcctgtcgtc
     2641 gctgctttcg cgcatgatcg atcccgaaga atttaccgcc gcgcaggcga atatgtttgc
     2701 cggattcaat accgtccaca gcgagctttt gggcataggc gcgctgattc tgctcgtcag
     2761 cgcggcggtc gtttggcgcg aacgctaccg cttggacgtt taccttttgg ggcgtgacca
     2821 agccgtcaat ttgggcatca gctacacgcg caacacctta tggatactgc tttggattgc
     2881 cgcattggtg gcgacggcga ccgccgtggt cggccccgta agctttttcg ggcttctcgc
     2941 cgcctcgctt gccaaccact tttccccgtc ggtcaaacat tccgtccgcc tgccgatgac
     3001 ggtttgtatc ggcggcatcc tcttggtcgg cggacagacc gtgttcgaac acctgctcgg
     3061 tatgcaggca gtgttgagcg tagtagtaga atttgccggc ggactcgttt tcctctatct
     3121 cgttttaaaa cacaaaaaat gacggatgcc gtctgaacgg ccgccgcccc gaaaggacaa
     3181 accatatgac acaagaacat ttcccatcat tcttcaacca agccccgacc attaccgtcc
     3241 aagacgcatt ggccgaattc ctcggcgcgg ccgaaaacgg catcctcact taccgctacg
     3301 ccgatgccgt gcgcctgtgc ggacattcct gcccgaccgt cgcgggcgcg tacctgatgg
     3361 ttatcaaagg tctgaaagca ctttacggcg aagagctgcc cgaacgcggc ggcatcgaag
     3421 cctttatgca gggcgcgcgc gacgaaggca cggtcggcgt aaccgcgtcc gtcgtccaac
     3481 tcctcaccgg cgcagccccc gaaaccggct ttggcggcat cggaatgcag ggacgctttg
     3541 cccgccgcca cctcttatcc tttggtgtag gcgaaatcaa cggcacactg accctgcgcc
     3601 gcaaagacaa cggcaaaacc gtcgccgtca gcctcaacgc cgccctgcaa ccctttgcac
     3661 ccgaaatgcg cgaacttatg cccaaagccg tcggcggcag cgcaagcgcc gacgaactta
     3721 aacaattcgg cgaactctgg caagaacgcg tccgtgcctt cctgattgac caagccgaca
     3781 accccgaatt tgttaccgtc agcgaaatct aaccatacag gaataaaatt cagacggcct
     3841 catcatttaa aggccgtctg aaaatccaat tccccatatt cgaatccgcc tatgattacc
     3901 atccgcaacg tcagcttcca catcggcact tgccccattc tggacaacat cagcctcgac
     3961 attcccgaag gcggcattac cgcgctgatc ggcccgaacg gcgcaggcaa gtccaccctg
     4021 ttttccttta tggcgcggct gcgcccgctt gaaagcggca gcatcgccta ccgcggcaaa
     4081 aaccttgccg gcactcccac cgccgaactc gcccgcacgc tctccatcct cacccaagaa
     4141 aacagcatca tgagccgcat caccgtgcgc gacctgctga tgttcggccg ttacccctac
     4201 catcaaggca gaccgactgc cgaatgccgc cgtatcgtta acggtgcaat cgaagaattc
     4261 cacctgcaag acctctccga ccgctatctg accgaactct ccggcggcca acgccaacgc
     4321 gccatgattg cgatggtgtt ctgccaaagc accgactacg tccttttgga cgaaccgctg
     4381 aacaacctcg atatgtatca cgcccgctcg ctcatgcaga ttctgcaaaa gctcacgcgc
     4441 gaacacaaac gcaccaccgt cgccgtattg cacgacatta accaggccgc cgcttacgcc
     4501 gaccacgtcg tcgccatgaa aaacggcaaa gtcgccctga ccggcacgcc cgaagaagtg
     4561 ttcaccgtac acaacatcaa agaactgttc gacatggacg tggacgtact cgactacgaa
     4621 ggcaaaaaac tcatcgtcca ccatatctga acccgaaaaa aatgccgtct gaacattcag
     4681 acggcacccc atatcctgac aaaattaaga cacgacaccg gcagaattga catcagcata
     4741 atatgcacat attaacagat attaatgccg aactacctaa ctgcaagaat taaataaata
     4801 aataaataaa taaataaata aataaataaa ttgcgacaat gtattgtata tatgcctcct
     4861 ttcatatata ctttaatatg taaacaaact tggtggggat aaaatactta caaaagattt
     4921 ccgccccatt ttttatccac tcacaaaggt aatgagcatg aaacactttc catccaaagt
     4981 actgaccaca gccatccttg ccactttctg tagcggcgca ctggcagcca caaacgacga
     5041 cgatgttaaa aaagctgcca ctgtggccat tgctgctgcc tacaacaatg gccaagaaat
     5101 caacggtttc aaagctggag agaccatcta cgacattgat gaagacggca caattaccaa
     5161 aaaagacgca actgcagccg atgttgaagc cgacgacttt aaaggtctgg gtctgaaaaa
     5221 agtcgtgact aacctgacca aaaccgtcaa tgaaaacaaa caaaacgtcg atgccaaagt
     5281 aaaagctgca gaatctgaaa tagaaaagtt aacaaccaag ttagcagaca ctgatgccgc
     5341 tctggatgca accaccaacg ccttgaataa attgggagaa aatataacga catttgctga
     5401 aga
//
LOCUS       DAWGKF010000137         5401 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.137, whole genome shotgun sequence.
ACCESSION   DAWGKF010000137 DAWGKF010000000
VERSION     DAWGKF010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5401)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5401)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5401
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.137"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(90..1886)
                     /locus_tag="WHR07_001675"
     CDS             complement(90..1886)
                     /locus_tag="WHR07_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEZ2130868.1"
                     /translation="MNTVSNYLSALREAMKAQGLDALVIPSADPHLSEYLPEHWQARR
                     ELSGFTGSVGTFVVTADEAGVWVDSRYWEQAAKQLAGSGIELQKSGQVPPYNEWLAAN
                     LPENAAVGIPSDMVSLTGKRTLAQSLAAKNIRIEHPNDLLDQVWTSRPAIPAETVFIH
                     DPAYVSETAAEKLARVRAVMAEKGADYHLVSSLDDIAWLTNLRGSDVPFNPVFVSFLL
                     IGKDNAVLFTEQCRLNAEAAAALQTAGITVEPYAQVADKLAQIGGALLIEPNKTAVST
                     LVRLPESVCLIEGINPSTLFKSCKSEADIARIREAMEHDGAALCGFFAEFEDIIGNGG
                     SLTEIDVDTMLYRHRSVRPGFVSLSFDTIAGFNANGALPHYSATPESHSTISGNGLLL
                     IDSGAQYKGGTTDITRVVPVGTPTAEQKRDNTLVLKAHIALAEAVFPENIPSPLIDAI
                     CRKPLWQAQCDYGHGTGHGVGYFLNVHEGPQRIAFAAPATPETAMKKGMVTSIEPGLY
                     RPGKWGIRIENLAANQAVAAPQETEFGSFLCFETLTLCPIDTRLIDAALMTDGEIDWV
                     NRYHAEVRRRLEPLTEGAAKAWLIKRTEPLAR"
     gene            2344..3597
                     /locus_tag="WHR07_001676"
     CDS             2344..3597
                     /locus_tag="WHR07_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HEZ2130869.1"
                     /translation="MSEQHISTWKSKINALGPGIMMASAAVGGSHLIASTQAGALYGW
                     QIALIIILTNLFKYPFFRFSAHYTLDTGKSLIEGYAEKSRVYLWVFLILCILSATINA
                     GAVAIVTAAIVKMAIPSLMFDAGTVAALIMASCLIILVSGRYRALDRVSKIIIVTLSI
                     ATLAAAGIAMSRGMQMQPDFIEPTPWTLAGLGFLIALMGWMPAPIEISAINSLWVTEK
                     QRINPSEYRDGIFDFNVGYIASAVLALVFLALGAFVQYGNGEAVQMAGGKYIGQLINM
                     YAVTIGGWSRPLVAFIAFACMYGTTITVVDGYARAIAEPVRLLRGKDKTGNAEFFAWN
                     IWVAGSGLAVIFWFDGVMANLLKFAMIAAFVSAPVFAWLNYRLVKGDEKHKLTSGMNA
                     LALAGLIYLTGFTVLFLLNLAGMFK"
     gene            3752..5263
                     /gene="lysS"
                     /locus_tag="WHR07_001677"
     CDS             3752..5263
                     /gene="lysS"
                     /locus_tag="WHR07_001677"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEZ2130870.1"
                     /translation="MSEQNHPQTEPQLDENQIIALRREKLHNIRQQRNAYPNDFKRDS
                     FAADLHAQYGEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNK
                     GVSQEVLDDFNHWDLGDIVGAEGTLFKTNHGELTVRVSDIRLLSKSLRPLPDKHKGLS
                     DQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGAT
                     AKPFVTHHNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNEGMSVRHNPEFTM
                     IEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKK
                     YNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCAEGKLWNPTFIIDY
                     PVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAERFKAQVAQKDAGD
                     DEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFPQMRPE"
BASE COUNT         1173 a         1374 c         1590 g         1264 t
ORIGIN      
        1 cttgcggcaa gatgaaaacg gtgcgggatg ttttgggaaa ccaatgccgt ctgaagggct
       61 ttcagacggc attttttgcg ccgtgctgtt taacgcgcca gcggttcggt gcgtttgatc
      121 agccacgctt ttgccgcgcc ttcggtcagc ggctcgaggc ggcggcggac ttcggcgtgg
      181 tagcggttga cccagtcgat ttcgccgtcg gtcatgaggg cggcgtctat caggcgggtg
      241 tcgatggggc agagggtcag ggtttcaaaa cagaggaagc tgccgaattc ggtttcttga
      301 ggggcggcga cggcttggtt ggcggcaagg ttttcaatgc ggatgcccca ttttcccggg
      361 cggtagagtc cgggttcgat ggaggtaacc atgccttttt tcatggcggt ttcgggcgtg
      421 gcgggggcgg cgaaggcgat gcgctgcggg ccttcgtgga cgttgaggaa atagcctacg
      481 ccgtgtccgg tgccgtggcc gtagtcgcat tgcgcctgcc acaggggttt gcggcaaatc
      541 gcatcaatca gcggcgaggg gatgttttct gggaacacgg cttcggcaag cgcgatatgg
      601 gctttgagaa cgagggtgtt gtcgcgtttt tgttcggcgg tgggtgtgcc gacagggacg
      661 acgcgggtga tgtcggtcgt gccgcctttg tattgcgcgc cggagtcgat gagcagcagc
      721 ccgttgccgc tgatggtgct gtggctttcg ggcgttgcgc tgtaatgcgg cagggcgccg
      781 ttggcgttga agcctgcgat ggtgtcgaaa ctcaatgaca caaaacccgg gcgcacgctg
      841 cggtggcggt aaagcatggt gtccacgtcg atttcggtca ggctgccgcc gttgccgatg
      901 atgtcttcaa actcggcgaa gaaaccgcac aacgccgcgc cgtcgtgttc catcgcttcg
      961 cggatgcggg cgatgtcggc ttcggatttg caggatttga acagcgtgga cgggttgatg
     1021 ccttcgataa ggcacacgct ttcgggcagg cgcacaagcg tgctgacggc ggttttgttc
     1081 ggttcgataa gcagcgcgcc gccgatttgc gcgagtttgt cggcaacttg ggcataaggt
     1141 tcgaccgtga tgcctgcggt ttgcagcgcg gcggcggctt cggcgttcag acggcattgt
     1201 tcggtaaaca ggacggcgtt gtctttgcca atcagcagga aggacacgaa aacagggttg
     1261 aaaggcacgt cgctgccgcg caggttggtc agccaggcga tgtcgtcaag cgaggaaacc
     1321 aagtggtaat ccgcgccttt ttccgccatc acggcgcgca cgcgggcgag tttttcggcg
     1381 gcggtttcgg agacgtaggc ggggtcgtgg atgaacacgg tttcggcagg aatggccggg
     1441 cggcttgtcc acacttggtc aagcagatcg tttgggtgtt cgatgcggat gtttttggcg
     1501 gcgagcgatt gcgccaaagt gcgtttgccg gtgagcgaga ccatatcgga agggatgccg
     1561 acggcggcgt tttcgggcag gtttgccgcg agccattcgt tatacggcgg cacttgcccg
     1621 cttttttgca gttcgatgcc gctgcccgca agctgcttgg cggcttgttc ccaatagcgg
     1681 ctgtccaccc atacgcccgc ttcgtcggcg gtaacgacga atgtgccgac cgagccggta
     1741 aagcccgata attcgcggcg cgcctgccaa tgctcgggca ggtattcgga caggtggggg
     1801 tcggcggaag ggatgacgag tgcatccaag ccttgcgcct tcatggcttc gcgcaatgcg
     1861 gacaggtaat tcgatacggt attcataaca gttcctccaa tcgggttttg cggcttcaga
     1921 cggcatggac ggaaatctga aatgccgtct gaaaaacata accatcttat caaatcgcca
     1981 gcctgctgca aaacggacgg gctaatcgga tggtgcgtgt ttgcgcgaaa aaagcgatgt
     2041 aaggttgttt gttgtaaaat tttaggcata aaatgtcgtt tcatgccttt ttttggaagt
     2101 aatacggaaa atatagtcaa gtttgagcat gaagttctaa tggtgtgtgt tggcaggtat
     2161 ttggattacg ttacaatacg tgttttcatc aaaatttccc taccgagcgg tatcctgttt
     2221 ttgaagacgg taggatttgg gtttgtttgg gggcaatccc gcccaaattg gagcaataga
     2281 tagggctgtg tccgaatatg cggctctgtg tgttgaaaca cggttaaaaa tacggaagac
     2341 tttatgtccg aacaacatat ttcgacttgg aaaagtaaaa tcaacgcact ggggccgggg
     2401 attatgatgg cttcggcggc ggtcggcggt tcgcacctga ttgcctcgac gcaggcgggt
     2461 gcgctttacg gctggcagat cgcgctcatc atcatcctga ccaacctctt caaatacccg
     2521 tttttccgct tcagcgcgca ttacacgctg gacacgggca agagcctgat tgaaggttat
     2581 gccgagaaaa gccgcgttta tttgtgggta ttcctgattt tgtgcatcct ctccgccacg
     2641 attaacgcgg gcgcggtcgc cattgtaacc gccgccatcg tcaaaatggc gattccctcg
     2701 ctgatgtttg atgccggcac ggttgccgcc ttgattatgg catcctgcct gattattttg
     2761 gtgagcggac gttaccgcgc tttggatcgc gtttccaaaa tcatcatcgt tactttgagt
     2821 atcgccacgc ttgccgccgc cggcatcgct atgtcgcgcg gtatgcagat gcagcccgat
     2881 tttatcgagc cgacaccgtg gacgcttgcc ggtttgggct tcctgatcgc gctgatgggc
     2941 tggatgcccg cgccgattga aatttccgcc atcaattctt tgtgggtaac cgaaaaacaa
     3001 cgcatcaatc cttccgaata ccgcgacggg atttttgatt tcaacgtcgg ttatatcgcc
     3061 agtgcggttt tggctttggt tttccttgca ctgggtgcgt ttgtgcaata cggcaatggc
     3121 gaagcagtgc agatggcggg cggcaaatat atcgggcaat tgatcaatat gtacgccgtt
     3181 accatcggcg gctggtcgcg cccgctggtg gcgtttatcg cgtttgcctg tatgtacggc
     3241 acgacgatta ccgttgtgga cggctatgcc cgtgccattg ccgaacccgt gcgcctgctg
     3301 cgcggaaaag acaaaacggg caacgccgaa ttctttgcct ggaatatttg ggtggcgggc
     3361 agcggtttgg cggtgatttt ttggtttgac ggcgtaatgg cgaatctgct caaatttgcg
     3421 atgattgccg cttttgtgtc cgcccctgtg tttgcctggc tgaattaccg tttggtcaaa
     3481 ggtgatgaaa aacacaaact cacatcaggt atgaatgccc ttgcattggc aggcttgatt
     3541 tatctgaccg gttttaccgt tttgttctta ttgaatttgg cgggaatgtt caaatgataa
     3601 cgatgccgtc tgaaaccgca aaccgctttc agacggcatt gtcgcgttta tggaaaaaaa
     3661 tgccgacatc gcgtaaaata tgcgcaaatt ttgtgattcg gtcaggtcgt ctgaaacaga
     3721 ttgcgcctga tttatttttt cggaaaaccc tatgagcgaa caaaaccatc cgcaaaccga
     3781 gccgcagttg gacgaaaacc aaatcatcgc cctgcgccgc gaaaaactgc acaacatccg
     3841 ccaacagcgc aacgcctatc ccaacgactt caaacgcgac agcttcgccg ccgatttgca
     3901 cgcccaatac ggcgaaatcg gcaaagaaga actcgatccg caaggcattc ccgtcaaagt
     3961 ggccggccgc atgatgctga agcgtcaaat gggcaaggcg agctttgcca ccattcaaga
     4021 cgtgtccggg caaatccagc tttatctgaa caacaaaggc gtgagccaag aagttttgga
     4081 cgacttcaac cattgggatt tgggcgacat cgtcggcgcg gaaggcactt tgttcaaaac
     4141 caaccacggc gaactgaccg tacgcgtgtc cgacatccgc ctgttgtcca aatccttgcg
     4201 tccgctgccg gacaaacaca aaggcttgag cgatcaggaa accaaatacc gccaacgcta
     4261 tgtcgatttg attgccaacg aagaatcgcg caataccttt atcaaacgca gccaaatcat
     4321 ccaatccgtg cgtaatttta tggtgggcga gcattatctc gaagtcgaaa ccccgatgat
     4381 gcacccgatt cccggcggcg cgacggcaaa acccttcgtt actcatcaca atgccttaga
     4441 tattccgctt tacctgcgta tcgcgcctga gctgtatttg aaacgcctgg ttgtcggcgg
     4501 cttggaacgc gtgtttgaaa tcaaccgcag cttccgcaac gaaggcatgt ccgtgcgcca
     4561 caaccccgaa tttacgatga ttgaatttta cgaagccttc tccgactacg aacgtatgat
     4621 gcagatggcg gaagacatca tccgcaacgc atcgcgcaca gtaaacggta cggcaaacat
     4681 cacttacaat ggcaaagaag tcgatttgga aagcccgttc gagcgtctga ccatcctcga
     4741 agccatcaaa aaatacaatc cgcactacac cgacgagcag ttgaacgatg cggaatggct
     4801 gaaaaaagaa atcgtcaaac acggtgaaag cctgccgccg tccccgggca tcggcagcct
     4861 gcaactcgcg ctgtttgaag gttgcgccga gggcaagctg tggaacccga ctttcatcat
     4921 cgattacccg gtcgaagttt ccccgttggc gcgcgcttcg gataccaaac aaggtctgac
     4981 cgaacgtttc gaattgttcg ttgtcggccg cgaactggca aacggctatt ccgagttgaa
     5041 cgaccccgaa gaccaagccg aacgcttcaa agcgcaagtg gcgcaaaaag acgcgggcga
     5101 cgacgaagcg atgcactacg atgccgacta catccgcgcg atggagttcg gtctgccgcc
     5161 gactggcggt tgcggtatcg gcatcgaccg cttggtaatg ttgctgaccg attcgcaaac
     5221 catccgtgac gtgattctgt tcccgcagat gcgccccgag taatcataaa aacagttgaa
     5281 atggcaatgc cgtctgaacc cgattggatt cagacggcat tttgtatggc aggattgata
     5341 gtgaattaac aaaaatcagg acaaggcggc gagccgcaga cggtacaaat agtacggaac
     5401 c
//
LOCUS       DAWGKF010000138         5377 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.138, whole genome shotgun sequence.
ACCESSION   DAWGKF010000138 DAWGKF010000000
VERSION     DAWGKF010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5377)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5377)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5377
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.138"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(107..1030)
                     /gene="era"
                     /locus_tag="WHR07_001678"
     CDS             complement(107..1030)
                     /gene="era"
                     /locus_tag="WHR07_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004286080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEZ2130871.1"
                     /translation="MDIETFLAGERAAGGYRCGFVAIVGRPNVGKSTLMNHLIGQKIS
                     ITSKKAQTTRNRVTGIYTDDTAQFVFVDTPGFQTDHRNALNDRLNQNVTEALGGVDVV
                     VFVVEAMRFTDADRVVLKQLPKHTPVILVVNKIDKDKAKDRYALEAFVAQVRAEFEFA
                     AAEAVSAKHGLRIANLLELLKPYLPESVPMYPEDMVTDKSARFLAMEIVREKLFRYLG
                     EELPYAMNVEVEQFEEEDGLNRIYIAVLVDKESQKAILIGKGGERLKKISTEARLDME
                     KLFDTKVFLKVWVKVKSGWADDIRFLRELGL"
     gene            complement(1077..1796)
                     /gene="rnc"
                     /locus_tag="WHR07_001679"
     CDS             complement(1077..1796)
                     /gene="rnc"
                     /locus_tag="WHR07_001679"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HEZ2130872.1"
                     /translation="MKDDVLKQQAHAAIQKRLGYAFRDISLLRQALTHRSHHAKHNER
                     FEFVGDSILNYTVARMLFDTFPKLTEGELSRLRASLVNEGVLAEMAAEMNVGDGLYLG
                     AGELKSGGFRRPSILADAMEAMFAAVSFDADFNTAEKVVRHLFADRVRCADFQNQAKD
                     GKTALQEALQARRFALPKYRIEEQIGHANDSMFVVSCDLGELGFVCRAKGTSRKAAEQ
                     EAAKEALKWLEEKLPLKKKKK"
     gene            1963..2286
                     /locus_tag="WHR07_001680"
     CDS             1963..2286
                     /locus_tag="WHR07_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2185 domain-containing protein"
                     /protein_id="HEZ2130873.1"
                     /translation="MNAFAQALSSALDRCIATNTVAKQNRPVGFLYREAPVFENDSGW
                     RFFSGDETDEYTDDPDNFSIVSLADIAKTNPETAALLSQPEGSAWELAEDGTFQTVAD
                     WQPQD"
     gene            2334..2810
                     /locus_tag="WHR07_001681"
     CDS             2334..2810
                     /locus_tag="WHR07_001681"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HEZ2130874.1"
                     /translation="MNTIAPNLDGKHLRIGIVQARFTNEIGSEMLKVCCRTLQELGVA
                     DENITVATVPGALEIPIALMNFASSEKFDALIAIGVVIRGETYHFELVSNESGAGVSR
                     VALDYNIPIANAVLTTENDAQAIERIEEKASDAAKVAVECANLVNLLLEEQFEDEE"
     gene            2888..3313
                     /gene="nusB"
                     /locus_tag="WHR07_001682"
     CDS             2888..3313
                     /gene="nusB"
                     /locus_tag="WHR07_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEZ2130875.1"
                     /translation="MKTARRRSRELAVQAVYQSLINRTAAPEIAKNIREMSDFAKADE
                     ELFNKLFFGTQTNAAEYIRQIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVI
                     INEAIEVTKTFGGTDGHKFVNGILDKLAAQIRPDEPKRR"
     gene            complement(3681..4715)
                     /gene="pyrC"
                     /locus_tag="WHR07_001683"
     CDS             complement(3681..4715)
                     /gene="pyrC"
                     /locus_tag="WHR07_001683"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEZ2130876.1"
                     /translation="MQTLTIIRPDDMHLHLRDGDALKAVAPYTARQMGRAVIMPNLKP
                     PVVSVADALAYKARIMAVLPEGSAFEPLMTLYLTDQATPELVREAKAAGIVAFKLYPA
                     GATTNSDSGVTDLFKLIPVLEEMAKQDILFLVHGEVTDPEIDIFDREAAFIERVMKPV
                     LAQVPNLKVVFEHITTAEAARLVLEAGDNVAASVTPQHLLLNRNDLLVGGVRPHHFCL
                     PVLKRETHRQALVAAVTGEKAHKFFLGTDSAPHAKSAKENACGCAGMFSAMTAIELYA
                     EVFEKAGALDKLEAFASKNGARFYGIPENTDTITLVKQSQTVPASVPYGDGELVPMRA
                     GGEIGWTVQY"
     gene            complement(4775..5368)
                     /locus_tag="WHR07_001684"
     CDS             complement(4775..5368)
                     /locus_tag="WHR07_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130877.1"
                     /translation="MRMSRLMLLLSAFVLAACNAQNRQSGVRHQDFARVAVDLFRSAC
                     VLTQGSFESVSKFAAVGHFVPVGKEDLSHLPPTVAEPDVQALWTLERDGGIYYLSLTR
                     DSCSVKAERADSAALLEHFDGLVRQPPKNANIELRAEQSVQASFEIRQVSYAWREAGS
                     SEETVLTAQTADSPDLPVQAVLNLTHRSHNGKPLILP"
BASE COUNT         1252 a         1608 c         1323 g         1194 t
ORIGIN      
        1 tgcacagata atatcaaccc gtttttaaca aagatattcc cgattgaaac aaaatgccgt
       61 ctgaaacctg ttcggacggc atttgcgtaa agttcagcaa gaaaaactac aaacccagct
      121 cgcgcaggaa gcggatgtcg tccgcccaac cggatttgac tttgacccag accttcaaaa
      181 atactttggt atcaaacagt ttttccatat ccaaccgcgc ttcggtggaa attttcttca
      241 aacgctcccc gcctttgccg attaaaatcg ccttttggct ttccttatcg accaaaacgg
      301 cgatatagat gcggttcaaa ccgtcttcct cttcaaactg ctccacttcg acgttcatcg
      361 cataaggcaa ttcctcgccc aaatagcgga acaatttttc acgcacgatt tccatcgcta
      421 aaaaacgcgc cgatttgtcc gtaaccatat cttcgggata catcggcacg ctttcgggca
      481 gatacggctt gagcagctcc aacaggttgg caatccgcaa tccgtgtttc gcactgaccg
      541 cctccgccgc cgcaaattca aattcggcgc gcacttgggc aacaaacgcc tccagcgcgt
      601 aacggtcttt cgccttgtcc ttgtcgattt tgttgaccac taaaatgacc ggcgtgtgct
      661 tgggcagttg tttcaacacg acacggtcgg catcggtaaa gcgcatcgct tccacgacga
      721 aaaccaccac atccacgccg ccaagcgcct cggtaacgtt ttgattcagc ctgtcgttga
      781 gcgcgttgcg gtggtcggtt tgaaagccgg gcgtatcgac aaatacgaac tgcgcggtat
      841 cgtcggtata aatccccgtt acgcggttgc gcgtcgtctg cgcctttttg ctggtgatgc
      901 tgattttctg accgatgaga tggttcatca gcgttgattt gcccacgttc ggacgaccga
      961 caatcgccac gaagccgcaa cggtatccgc cggcggcgcg ttcccctgca aggaaggttt
     1021 caatatccat attcgctttc atatccacat ttcagacggc atattcacgc gccgcctcat
     1081 ttctttttct tcttcagcgg cagcttctct tccagccatt tcaaagcctc tttcgccgcc
     1141 tcctgttccg ccgccttgcg gctcgtccct ttggcacggc acacgaaacc cagttcgccc
     1201 aaatcgcagg aaaccacaaa catactgtcg ttggcatggc cgatttgctc ttcgatacgg
     1261 tatttcggca aagcaaagcg gcgtgcctgc aacgcctcct gcaaagcagt tttgccgtct
     1321 tttgcctgat tttggaaatc ggcacaccgg acgcggtcgg caaacaaatg gcgcaccacc
     1381 ttttccgccg tgttgaaatc ggcatcgaag ctgaccgccg caaacatcgc ctccatcgcg
     1441 tccgccagta tcgaaggccg tctgaagccg ccgctcttca actcgcccgc ccccaagtac
     1501 agaccgtcgc cgacattcat ttccgccgcc atttccgcca gcacgccctc attgaccaga
     1561 cttgcccgca accgcgacaa ctcgccctcg gtcaacttcg gaaacgtgtc aaacagcatc
     1621 cgcgccaccg tataattcaa aatcgaatca ccgacaaact cgaaccgctc gttgtgcttc
     1681 gcatgatggc tcctgtgcgt caaagcctgc cgcaaaagcg aaatatcgcg gaacgcgtag
     1741 cccagtctct tctgtatcgc cgcgtgtgcc tgctgtttca aaacatcgtc tttcattacc
     1801 gtcttccgca aaaaacagcc cgaatgcgtt tccatactcc aaaaatacag aaacacctta
     1861 aggctgcaaa cggcgcacat tgtaccacca aaccgccgcc gtctgccgac aacgcacgaa
     1921 tcgtggtaaa atccgtaagt tttcccccaa cgtattcccg taatgaacgc atttgcacaa
     1981 gcactttcct cggcactcga ccgctgtatc gccaccaaca ccgtcgccaa acaaaaccgg
     2041 cccgtcggct tcctctaccg cgaagccccc gtttttgaaa acgacagcgg ctggcgtttc
     2101 ttcagcggcg acgagaccga cgaatacacc gacgatccgg acaacttcag catcgtcagc
     2161 ctcgccgaca tcgccaaaac caaccctgaa accgccgcac tgctctccca acccgaaggc
     2221 agcgcatggg agcttgccga agacggcaca ttccaaaccg tcgccgactg gcagccgcaa
     2281 gactgaaacc ttcagacggc attccgaaac ctccgaatac caaaggacac ccaatgaaca
     2341 ccatcgcccc caacctcgac ggcaaacacc tccgcatcgg catcgtacag gcacgcttca
     2401 ccaacgaaat cggcagcgaa atgctcaaag tctgctgccg caccctccaa gaattgggcg
     2461 tggcagacga aaacattacc gtcgccaccg tacccggcgc gcttgaaatc cccatcgcgc
     2521 tgatgaactt tgcctcttcc gaaaagtttg acgcactgat tgccatcggc gtcgtcatcc
     2581 gtggcgaaac ctaccatttc gagctggttt ccaacgaatc cggagcaggc gtcagccgcg
     2641 tcgcactcga ctacaatatc ccgattgcca atgccgtcct aaccaccgaa aacgacgcgc
     2701 aggcaatcga acggattgaa gaaaaagcct cggatgccgc caaagtcgcc gtcgaatgcg
     2761 ccaacctcgt caacctgctg ctcgaagaac agtttgaaga cgaagaataa caaacagggc
     2821 gtacaccaat acgccctttc cgtttcagac ggcataccgt gccgcccaac cgtttcaagg
     2881 aaaaatcatg aaaacagccc gccgccgttc ccgcgagctt gccgtacaag ccgtttacca
     2941 atcccttatc aaccgcaccg ccgcgcccga aattgctaaa aacatccgcg aaatgtccga
     3001 ctttgccaag gcagacgaag aattgttcaa caaacttttc ttcggcacgc aaaccaatgc
     3061 ggcagagtat atccgacaaa tccgcccgct acttgacagg gacgaaaaag acctcaaccc
     3121 catcgaacgc gccgttttgc tgaccgcctg ccacgagctg tccgccatgc ccgaaacgcc
     3181 ctaccccgtc attatcaacg aagccatcga agttaccaaa accttcggcg gcacggacgg
     3241 gcacaaattc gtcaacggca tcctcgacaa actcgccgcc caaatccgcc ccgacgagcc
     3301 caaacgccgt tgatgcatca caaatttaaa gaaagttcta tgtccttatt tctgctttct
     3361 ttgtttcgtc attcccacgc aggtgggaat ttggtttttt gaattttggg tatttcaaat
     3421 aaattctgaa acttcaatct cgtcattccc gcgcaggcgg gaatccggtt ttttgagttg
     3481 ctgccgtttt tgataaactc tggtcgcatc gaatttctgg attcctgcct tcgtgggaat
     3541 ggcgaaattt gaaaattgtg ggaatttatc ggaaataacc gaaacgtaac aaactcaaac
     3601 gccgttgacg tatcaatcag tcagcaacac aaatgccgtc tgaaagccct cccttcagac
     3661 ggcattttgt ttccagccca tcaatactgc accgtccagc cgatttcgcc gcccgcgcgc
     3721 atcgggacaa gttcgccgtc gccgtaggga acacttgcgg gaacggtttg gctttgtttg
     3781 acgagggtga tcgtgtcggt attttcagga atgccgtaga accttgcgcc gttttttgag
     3841 gcgaaggctt cgagtttgtc caacgcgcct gctttttcaa atacttcggc gtaaagctcg
     3901 atagcggtca tcgcactgaa cataccggcg cagccgcagg cgttttcttt ggcggatttg
     3961 gcgtgcggcg cggagtcggt gccgaggaag aatttatgcg ccttctcgcc ggtaacggcg
     4021 gcgaccaatg cctgacggtg ggtttcgcgc ttgaggacgg gcaggcagaa atgatggggg
     4081 cgcacgccgc cgaccaagag gtcgttgcgg ttgagcagga ggtgttgcgg ggtcacagag
     4141 gcggcaacgt tgtcgcctgc ttccaaaacc aggcgggcgg cttcggcggt ggtaatgtgt
     4201 tcaaacacga ctttaagatt cggcacttgc gccaaaacgg gtttcatcac gcgctcgata
     4261 aaggcggctt cgcggtcgaa aatgtcgatt tcggggtcgg ttacttcgcc gtgaacgagg
     4321 aacaggatgt cctgttttgc catttcttcc aacacgggga tgagcttgaa taggtcggtt
     4381 acgccggaat cggaattggt cgtcgcgccg gcggggtaga gtttgaaggc gacgatgccg
     4441 gcggctttgg cttcgcgcac cagctcgggc gtggcttggt cggtcaggta aagcgtcatc
     4501 agcggctcaa acgcgctgcc ttcgggcaac accgccataa tgcgcgcttt gtaggcaagc
     4561 gcgtcggcta cactgacgac gggcggtttg aggttgggca taatgacggc gcgccccatt
     4621 tggcgggcgg tataaggggc aacggctttg agcgcgtcgc cgtcgcgcag gtgcaggtgc
     4681 atatcgtcgg ggcggataat ggtcagggtt tgcatggttt tcctttgttt tatttgaatg
     4741 ttcagacggc atgccgactt tatgccgtct gaagttaggg gagaattagg ggtttcccgt
     4801 tgtgggaacg gtgcgtcagg ttcaaaactg cctgtacggg taaatccggg gaatcggcgg
     4861 tttgtgcggt caatacggtt tcttcggagc tgcctgcttc ccgccaggca tagctgactt
     4921 ggcggatttc aaatgatgcc tgcaccgact gttccgccct caattctata ttggcatttt
     4981 tcggcggctg tcggacaagt ccgtcaaaat gttccaacag cgcggcactg tctgcccgct
     5041 cggctttcac actgcaactg tcgcgcgtca ggctcaaata ataaatgccg ccatcgcgtt
     5101 caagcgtcca caacgcctgt acatcgggtt ctgcaacagt gggcggcaga tgggacaggt
     5161 cttcctttcc gacagggaca aaatgtccga cagcggcaaa cttggaaacc gattcaaaac
     5221 tgccttgagt caggacgcag gcactccgaa acaaatcgac ggctacacgc gcgaaatcct
     5281 gatgccgtac accggattgc cggttttggg cattacacgc agcaagcaca aatgccgaca
     5341 gcaataacat caatcgggac atccgcattt cagacgg
//
LOCUS       DAWGKF010000139         5341 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.139, whole genome shotgun sequence.
ACCESSION   DAWGKF010000139 DAWGKF010000000
VERSION     DAWGKF010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5341)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5341)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5341
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.139"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(103..2937)
                     /gene="lbpA"
                     /locus_tag="WHR07_001685"
                     /gene_synonym="tbpA"
     CDS             complement(103..2937)
                     /gene="lbpA"
                     /locus_tag="WHR07_001685"
                     /gene_synonym="tbpA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoferrin/transferrin-binding protein LbpA"
                     /protein_id="HEZ2130878.1"
                     /translation="MNRRHTFPLTLTALAIATAFPAYAAQAGVAAPDAAQTQSLKEVT
                     VRAAKVGRRSKEATGLGKIVKTSETLNKEQVLGIRDLTRYDPGVAVVEQGNGASGGYS
                     IRGVDKNRVAVSVDGVAQIQAFTVQGSLSGYGGRGGSGAINEIEYENISTVEIDKGAG
                     SSDHGSGALGGAVAFRTKEAADLISDGKSWGIQAKTAYGSKNRQFMKSLGAGFSKDGW
                     EGLLIRTERQGRETRPHGDIADGVAYGINRLDAFRQTHDIQSKDKTGQFFLVEGENTL
                     KPVAKLAGYGIYLNRQLNRWVKERIEQNKPLSAEEEAMVREAQARHENLSAQSYTGGG
                     RILPDPMDYRSGSWLAKLGYRFGGRHYVGGVFEDTKQRYDIRDMTEKQYYGTDEAEKF
                     RDKSGVYDGDDFRDGLYFVPNIEEWKGDTNLVKGIGLKYSRTKFIDEHHRRRRMGLLY
                     RYENEAYSDNWADKAVLSFDKQGVATDNNTLKLNCAVYPAVDKSCRASADKPYSYDSS
                     DRFHYREQHNVLNASFEKSLKNKWTKHHLTLGFGYDASNAISRPEQLSHNAARISEST
                     GFDDNNQDKYRLGKPEVVEGSVCGYIETLRSRKCVPRKINGSNIHISLNDRFSIGKYF
                     DFSLGGRYDRKNFTTSEELVRSGRYVDRSWNSGIVFKPNRHFSLSYRASSGFRTPSFQ
                     ELFGIDIYHDYPKGWQRPALKSEKAANREIGLQWKGDFGFLEISSFRNRYTDMIAVAD
                     HKTKLPNQAGQLTEIDIRDYYNAQNMSLQGVNILGKIDWNGVYGKLPEGLYTTLAYNR
                     IKPKSVSNRPDLSLRSYALDAVQPSRYVLGFGYDQPEGKWGANIMLTYSKGKNPDELA
                     YLAGDQKRYSTKRASSSWSTADVSAYLNLKKRLTLRAAIYNIGNYRYVTWESLRQTAE
                     STANRHGGDSNYGRYAAPGRNFSLALEMKF"
     gene            complement(2934..5075)
                     /locus_tag="WHR07_001686"
     CDS             complement(2934..5075)
                     /locus_tag="WHR07_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ2130879.1"
                     /translation="MCKPNYGGIVLLPLLLASCIGGNFGVQPVVESTPTAYPVTFKSK
                     DVPTSPPAKPSIETTPVNQPAVGAAMRLPRRNIATFDKNGNEIPDSKQAEEYLPLKEE
                     DILFLDGTPQEQADKLKKKINERYPDVKVITSTNEDAKYNYRFVRAGYVFTRGGGYDN
                     EKEKTPDGKEFVNRFSYDGFVYYSGEHPSQSLPRTETVQYSGNWQFVTDAKRWRTQND
                     GGGINLGFSHFYGNDIGATSYAARDVDDREKHPAKYTVDFGNKTLTGELIKNQYVKPN
                     EQQKPLIIYNITAKLDGNRFTGSASVNPKLKTNYSDKEYLFFHADADQRLEGGFFGDN
                     GEELAGRFISNDNSVFGVFAGKQKTDASNASDTKPALSSGKHTKILDSLKISVDEASD
                     NNARPFAISPMPDFGHPDKLLVEGREIPLVNKEQTIELADGRKMIVRACCDFLTYVKL
                     GRIKTERPASKPKAEDKGEDEEGAGVDNGEEGEDEAVEDEGSEEDEVSEGDNGENEEE
                     IAEEETEEEVEEPEEEVEEPEEELPAEEGNGGSGSILPTPEASKGRDIDLFLKGIRTA
                     EADIPKNGTAHYTGTWEARIGVSDSGTSIQKDSYANQGAKAEFTVDFEAKTVSGMLTE
                     KNDTTPAFYIEKGVIDGNGFHALAHTRENGIDLSGQGSTNPKNFKADNLLVTGGFYGP
                     QAAELGGNIIDSDRKFGAVFGAKKDDKEATR"
BASE COUNT         1139 a         1435 c         1254 g         1513 t
ORIGIN      
        1 ggaaatcttg tttatatcga atcaaaaaaa cctgcacctt aatcagttgg cggtttagtc
       61 cgacttttgg ggtgcagatc aagctttcag acggtatttc ctttaaaact tcatttcgag
      121 cgcgaggctg aagttcctgc ccggtgcggc ataccttcca tagttgctgt cgccgccgtg
      181 ccggtttgcc gtgctttccg cagtctggcg caaggattcc caagtaacgt agcggtagtt
      241 gccgatattg tagatagccg ccctcaaggt cagccgtttt ttcagattca gataggcgga
      301 aacgtctgcc gtcgaccaag aagacgacgc tctttttgtc gaatatcgtt tttgatcgcc
      361 tgccagataa gcaagctcgt cagggttttt ccctttggaa taggtcagca taatgtttgc
      421 gccccatttc ccctctggct ggtcgtatcc gaaccccaaa acataacgcg acggctgtac
      481 cgcatccaaa gcatagctgc ggagggacaa gtccggccgg ttggataccg atttcggttt
      541 gatgcggttg tatgccaatg tggtgtacaa accttcgggc agtttgccgt acacaccgtt
      601 ccagtcgatt tttcccaata tattaacgcc ttggagcgac atattttggg cattgtaata
      661 atcgcgtata tcaatctctg tcaattgtcc tgcctgattc ggcaatttgg ttttgtgatc
      721 ggcaacggca atcatatcgg tataacggtt gcggaagctg ctgatttcca aaaagccgaa
      781 atcgcccttc cactgcaaac cgatttcgcg gttggctgcc ttttccgatt tcagggcggg
      841 acgctgccag cctttcggat aatcgtgata aatgtctatc ccgaaaagtt cttggaatga
      901 gggcgttctg aagccgctgg aggcgcggta agacaaagaa aaatgccggt tcggtttgaa
      961 cacgatgccg ctgttccacg aacggtcaac ataccgtccg ctgcggacga gttcttccga
     1021 cgtggtgaag tttttccggt cgtacctgcc acccaagctg aaatcaaaat atttgccgat
     1081 tgaaaaacgg tcgttcaaag aaatgtggat attgctgccg ttgatttttc ttggcacgca
     1141 tttgcgggaa cgcagggttt cgatgtagcc gcagaccgac ccttcgacga cttcgggctt
     1201 acccaaacgg tacttatctt gattgttatc atcgaatccc gtggattccg aaatccttgc
     1261 cgcattgtgg gaaagctgtt cagggcggga aatcgcgttg gaagcatcgt aaccgaagcc
     1321 caaagtcaga tggtgtttcg tccatttgtt tttcagcgat ttctcaaacg aggcattcaa
     1381 aacattgtgc tgttcgcggt agtggaaacg gtcgctgctg tcgtaggaat acggtttgtc
     1441 cgccgacgcg cggcaggatt tgtccacagc aggatacacg gcgcaattca gcttcagcgt
     1501 gttgttgtcg gttgccacgc cctgtttgtc aaacgacaac accgccttat ccgcccagtt
     1561 gtcagaatac gcttcgtttt cataacggta cagcaaaccc atacggcggc ggcggtgatg
     1621 ttcgtcaata aatttggtgc gggaatattt caaacctatg cccttgacca aatttgtatc
     1681 gcccttccac tcttctatat tcggcacaaa atacaagccg tcgcggaaat cgtcgccgtc
     1741 gtacaccccg ctcttgtctc taaacttttc cgcctcgtcc gtaccgtaat actgtttttc
     1801 cgtcatatcg cggatgtcgt aacgctgttt ggtatcctca aacacgccgc cgacataatg
     1861 cctgccgccg aagcggtagc ccagcttggc aagccaagag ccgctgcggt aatccatcgg
     1921 atcgggcaat atcctgccgc cgcccgtgta cgattgggcg gacaggtttt cgtggcgcgc
     1981 ctgcgcctcc cgcaccatcg cttcttcttc agcacttaaa ggcttatttt gttcaatacg
     2041 ttcttttacc cagcggttaa gctggcggtt caaatatatc ccgtagcccg ccaattttgc
     2101 cacgggcttg agtgtattct cgccctctac taagaaaaat tgccctgttt tatctttgct
     2161 ttgaatatcg tgtgtctggc ggaacgcatc caaacggttt atgccgtatg ccaccccgtc
     2221 cgcaatatcg ccgtgcgggc gcgtttcccg cccttggcgt tcggtacgga ttagcagccc
     2281 ttcccaaccg tctttgctga accccgcgcc gagcgacttc ataaattggc ggtttttact
     2341 gccgtaggcg gtttttgcct gtatccccca gcttttgccg tctgaaatca ggtctgccgc
     2401 ctctttggtg cggaaagcga ccgcgccgcc gagtgcgccg ctgccgtgat cggatgaacc
     2461 ggcacctttg tcgatttcca ccgtgctgat gttttcatat tcgatttcgt tgattgcgcc
     2521 gctgccgccg cgtccgccgt atccgctcaa cgatccctgc acggtaaacg cctgtatttg
     2581 ggcaacgccg tcaaccgaaa ccgccacacg gtttttatcc acgccgcgta tcgaataacc
     2641 gccgctcgcg ccgttgccct gttcgacaac cgccacgccc ggatcgtagc gcgtcaggtc
     2701 gcggataccg agtacctgtt ctttgttcaa cgtttccgac gttttgacga ttttgcccaa
     2761 accggtcgcc tctttcgatc gccgtcccac tttggcggca cggacggtaa cctctttcag
     2821 ggattgggtc tgcgcggcat caggtgccgc cacccccgct tgggcggcat aagccggaaa
     2881 agcggttgca atggccaagg cggtcagggt aagtgggaat gtatgccttc tgttcatcgt
     2941 gttgcctcct tgtcatcttt tttcgcccca aataccgcac cgaatttccg gtcgctgtcg
     3001 ataatattac cgcccaattc tgccgcctgc gggccataaa agccgcctgt tacaagaaga
     3061 ttgtcggctt tgaagttctt cgggttagtc gaaccctgcc cagaaaggtc aataccgttc
     3121 tcccgagtat gcgccaaagc gtggaaaccg ttaccgtcaa tcacaccttt ttcaatataa
     3181 aaagcggggg ttgtatcatt tttttctgtc agcattccgg acaccgtctt cgcttcgaaa
     3241 tcaacggtaa attctgcttt tgccccttga ttcgcatagc tatccttttg aatggacgta
     3301 ccactatccg atacgccgat acgcgcttcc caagtgccgg tataatgcgc cgttccgttt
     3361 tttggaatgt cggcttccgc cgtgcggata cctttcagga aaaggtcgat gtccctgcct
     3421 ttagaggctt ccggagtggg caggatgctg cctgaaccgc cgttgccttc ttctgccggc
     3481 aattcttctt cgggttcttc aacttcttct tcgggttctt caacttcttc ttcggtttct
     3541 tcttcggcga tttcttcttc gttttcaccg ttatcacctt cggaaacttc gtcttcttcg
     3601 ctgccttcgt cttctacggc ttcgtcttcg ccttcttcgc cgttatcaac gcctgcaccc
     3661 tcttcatcct cccctttatc ttccgccttt ggtttacttg ccgggcgttc ggtttttatc
     3721 cgtccgagtt tcacataggt cagaaaatcg caacaagcac ggacgatcat tttcctgccg
     3781 tcggcaagct cgatggtttg ttctttgttt accaaaggaa tttcacgccc ttcgacaaga
     3841 agtttgtcag gatgaccaaa atcgggcata ggggaaatgg caaacgggcg ggcattgtta
     3901 tcacttgcct cgtcaacgga aatttttaga gaatccaaga ttttggtgtg ttttccagac
     3961 gacagggcag gttttgtatc tgatgcgttt gatgcgtctg ttttttgttt gcctgcgaat
     4021 acgccgaata cgctgttgtc gttgctgata aaccgtccgg caagctcttc tccgttatcg
     4081 ccgaaaaaac cgccctcaag ccgctgatcg gcatcggcat ggaaaaacaa atattccttg
     4141 tccgaatagt ttgtcttcaa tttaggattg acactggcac tgccggtaaa gcggttgccg
     4201 tccaattttg cagtaatgtt gtaaatgatc agcggttttt gctgctcatt gggtttgaca
     4261 tattggtttt taatcagctc gcccgtcagg gttttgttac cgaaatctac cgtatatttg
     4321 gcaggatgtt tttccctgtc gtcgacatcc ctagcggcat aagaggttgc accgatatcg
     4381 ttgccgtaaa agtgactaaa ccccaaattt ataccgccac catcattttg tgtccgccaa
     4441 cgcttggcat cggtaacaaa ctgccaatta ccggaatatt gcacggtttc agtacgcggc
     4501 agggattgag acggatgttc tcctgaataa tatacaaaac cgtcataact aaatcggtta
     4561 acaaactcct taccatcagg agtcttttct ttttcattat cgtatcctcc ccccctggta
     4621 aacacatagc ccgcacggac aaaccgataa ttatattttg catcttcatt tgtcgatgtg
     4681 ataaccttca catcaggata ccgttcgttg attttctttt taagtttgtc ggcctgttct
     4741 tgcggcgtac cgtctaaaaa caggatatcc tcctctttga gcggcagata ctcctctgcc
     4801 tgcttactat cgggaatttc attaccattt ttatcaaaag ttgcgatatt ccgccttggc
     4861 agccgcattg ccgcaccgac ggcaggttga ttgaccggcg tggtttctat agaaggtttg
     4921 gcagggggcg aagtgggaac gtccttagac ttgaaagtga cggggtacgc ggtcggcgtt
     4981 gattcgacaa caggctgcac gccgaaattg ccgccaatac aagatgccaa aagtaagggc
     5041 aacaagacaa tgccgccata attcggttta cacatcccta cttttcctcc tatttgatta
     5101 ataataatta tcattatatt aatatgtaca gataatatca agccgttttt atagtgaatt
     5161 aacaaaaatc aggacaaggc gacgagccgc agacagtaca gatacatccc gtcattccca
     5221 cgaacctaca tcccgtcatt cccacgaacc tgcaccacgt cattcccacg aaagtgggaa
     5281 tccagttcgt tcggtttcgc ttgttttaag tttcgggtaa cttctacttc gtcattccca
     5341 c
//
LOCUS       DAWGKF010000140         5258 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.140, whole genome shotgun sequence.
ACCESSION   DAWGKF010000140 DAWGKF010000000
VERSION     DAWGKF010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5258)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5258)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5258
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.140"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            112..807
                     /gene="pgl"
                     /locus_tag="WHR07_001687"
     CDS             112..807
                     /gene="pgl"
                     /locus_tag="WHR07_001687"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HEZ2130880.1"
                     /translation="MFVWHEYENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRS
                     PIAFFNALSQKDLDWKNVGITLADERIVPTVHADSNTGLVREYLLKNKAEAAMWIPMV
                     EDGKTETELHPDAVVDYALKHYKQPDVLVLGMGNDGHTASIFPKAPQFQTAIDGSAGV
                     ALVHTTPVTAPHERVSMTLDAIAHTGHVFLAIRGEEKKAVFDQAAQGENREYPINLVL
                     NHQGVNCHVFYAE"
     gene            788..1774
                     /locus_tag="WHR07_001688"
     CDS             788..1774
                     /locus_tag="WHR07_001688"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HEZ2130881.1"
                     /translation="MSSTPNKQAGYPRLVADIGGTNARFALETAPRVIEKAAVLPCKD
                     YDTVTDAVRAYLNQSGATAVRHAAFAIANPILGDWVQMTNHHWAFSIETTRQTLGLDT
                     LILLNDFTAQALAVTQTSSKDLMQVGGQKPVEFAPKAVIGPGTGLGVSGLVHSHAGWV
                     ALAGEGGHTSFPPFDDMEVLIWQYAKNKYGHVSAERFLSGAGLSLVYEALAAKQKAKP
                     AKLMPSEITEKALSGASPLCRQTLDIFCAMLGTVASNLALTLGARGGVYLCGGIIPRV
                     LEYFKTSPFRSRFENKGRFEAYLAAIPVYVVLSEFPGISGAAAALDNHLRNV"
     gene            1824..2672
                     /gene="hexR"
                     /locus_tag="WHR07_001689"
     CDS             1824..2672
                     /gene="hexR"
                     /locus_tag="WHR07_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HexR"
                     /protein_id="HEZ2130882.1"
                     /translation="MLSKISESLANLSGAERKVAECALAEPKWFVHAAVAEIAERASV
                     SQPTVIRFCRSLGYKGLPEFKLALSASIGHEGMPYVHEELNADDDMASVVEKVLGNAA
                     ASLLGERRFLKESELENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYV
                     DTHTQLMAASVLSDQDVLVAISNTGSSIELLDAVSIAKENGASVIALTRNDSPLAQLA
                     DCVLSVATQENAELYTPMVSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKSIHNKH
                     IDYDKD"
     gene            2793..4439
                     /gene="pgi"
                     /locus_tag="WHR07_001690"
     CDS             2793..4439
                     /gene="pgi"
                     /locus_tag="WHR07_001690"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEZ2130883.1"
                     /translation="MKHFHDLPAWPKLWNHFDDSKTLHMREMFEQDPQRAERYWLQVG
                     GLTLDYSKNRINDETMSLLFELAREAGVPERMRQMFHGEKINTTENRAVLHVALRNRT
                     NSPIVVDGEDVMPKVNRVLQRMGEFAHEVRSGSWLGYTNQVITDVVNIGIGGSDLGPL
                     MMCTALKPFGHPRLNMHFVSNVDGSQLRDVLSKVHPETTLFIIASKTFTTQETLTNAL
                     TAREWFLNHAGDESAVAKHFVAVSTNQKAVAEFGIDTANMFEFWDWVGGRYSLWSAIG
                     LPIMLYLGEENFIEMLNGAHLMDQHFINTPLERNLPAILALIGIWYINYYGGGSHVIA
                     PYDQHLHRLPKFIQQLDMESNGKQVTLDGKAVGHETSPIIWGETGINGQHAFFQLLHQ
                     GTHITPIDLIASLEKRSNLPGHHEILLANVFAQAEAFMRGKTPDEVRAELKAQGMDEA
                     RIEELVPHKTFSGNRPTNLILMDKVNPRNMGSLIAMYEHKTFVQGIIWGINSFDQWGV
                     ELGKQLAKTILGELTGETGPQKHDSSTERLIRLYLQTNRK"
     gene            4453..5004
                     /locus_tag="WHR07_001691"
     CDS             4453..5004
                     /locus_tag="WHR07_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HEZ2130884.1"
                     /translation="MPSERRPFQTAFLSNRKTVGKLAERVQSRYDGLHKFKHVCSAAM
                     ALIKEPLDKAKQRNEELEAAEEAAAQEALGREQEVDRVSEWEERYKLSRSEFEQFWKG
                     LPQTVQNKLQASQKTWKSGMDKICANNAKAEGETPNGIKFSELACKTAETEARLEELH
                     NRKKALIDEMAREADKKELPKRL"
BASE COUNT         1336 a         1465 c         1393 g         1064 t
ORIGIN      
        1 aagcagtccc gatatttggt atcaaaagca taaacaactg ttcggccgac atattgctca
       61 acccgtttcc ataacggaat atgccgtctg aaataaaaaa aggacacaaa tatgtttgtt
      121 tggcacgaat acgaaaatgc ggcagaagcg gcgcagtctt tggctgacgc agtggcggat
      181 gctttgcagg gcgcactgga cgagaagggc ggtgcggtgt tggcagtttc cggcggacgt
      241 tcgccgattg catttttcaa cgccctgtcg caaaaagatt tggattggaa aaacgtcggc
      301 atcaccttgg cagatgaacg catcgtgccg accgtccacg ccgacagcaa taccggtttg
      361 gtgcgcgaat acctgttgaa gaacaaagcg gaagcggcaa tgtggattcc tatggtggaa
      421 gacggaaaaa ctgaaaccga attacatccc gatgctgttg tcgattatgc actgaaacat
      481 tacaaacagc ccgatgtttt ggttttgggt atgggaaacg acgggcatac ggcttcgatt
      541 ttcccgaaag ctccgcagtt tcagacggca atcgacggtt cggcaggtgt cgcgctggtg
      601 cataccacgc ccgttaccgc gccgcacgag cgcgtcagta tgaccttgga tgcgattgcc
      661 catacggggc atgtgttttt ggcgatacgg ggcgaagaga aaaaagccgt gttcgaccaa
      721 gccgcacaag gcgaaaaccg cgaatatccg atcaacctcg ttttgaacca tcaaggagtg
      781 aactgccatg tcttctacgc cgaataaaca agccggatat ccccgactgg tcgccgatat
      841 cggcgggacg aatgcacgct ttgcgctgga aaccgcgccg cgcgtcattg aaaaagccgc
      901 cgtgcttccg tgtaaagact acgatacggt taccgatgcg gtgcgtgcct atctgaatca
      961 aagcggtgca acagccgtac ggcacgcggc atttgccatc gccaacccga ttttgggcga
     1021 ctgggtgcag atgaccaacc accattgggc gttttccatc gaaaccaccc gtcagacttt
     1081 ggggctggac accctcatcc ttttgaacga ctttaccgcg caggcattgg cggtaacgca
     1141 gacttcaagc aaagacctga tgcaggtagg cgggcaaaag cctgtcgaat ttgcccccaa
     1201 agccgttatc ggccccggta ccggcctggg cgtgagcgga ttggtgcaca gccacgcagg
     1261 ctgggtggct ttggcgggcg agggcgggca taccagtttc ccgccgtttg acgatatgga
     1321 agtgctgatt tggcagtacg ccaaaaacaa atacggccat gtttccgccg aacgcttttt
     1381 gagtggcgcg ggcttgagct tggtttacga ggctttggct gcaaaacaga aagccaaacc
     1441 cgccaaactg atgccgtctg aaatcacgga aaaggctttg agcggcgcgt cgcctttgtg
     1501 ccgtcagact ttggacatct tctgcgccat gctcggcacg gttgcttcca acctcgccct
     1561 gacgctgggc gcgcgcggcg gcgtgtacct gtgcggcggc attattcccc gcgtgttgga
     1621 atatttcaaa acttccccgt tccgcagccg tttcgagaac aagggcaggt ttgaagcata
     1681 tcttgccgcg attcccgtgt atgtcgtctt gagcgagttc cccggaattt ccggtgcggc
     1741 tgcggctctc gacaaccatt tgagaaacgt ttaaccacag cggctccttg cagcggggct
     1801 gcattatcga agggcatatc attatgttaa gcaaaatcag cgaatcactg gcaaaccttt
     1861 ccggtgcgga acgcaaagtc gccgaatgtg cattggcgga acccaaatgg ttcgttcatg
     1921 ccgccgttgc cgaaattgcc gaacgtgcgt ccgtcagcca gccgaccgtc atccgattct
     1981 gccgcagctt gggttataaa gggctgcccg agttcaagct cgccttgtcc gccagcatcg
     2041 gtcatgaggg tatgccctat gtccacgaag aactcaatgc cgacgacgat atggcaagcg
     2101 tggtcgagaa agtgttgggc aatgccgccg cctcgctgtt gggcgaacgc cgcttcctga
     2161 aagagtcgga gctggaaaac gccattgcca cgctgatgca cgcccgtcgc gtcgagtttt
     2221 acggtgtcgg caattccggt atcgttgcgc aggacgcgca acacaagttt ttccgtttcg
     2281 gaatgtccac ggtcgcctat gtcgatacgc acacgcagct gatggcagca tccgttttga
     2341 gcgatcagga tgttttggtt gccatttcca acacgggttc gtctatcgaa cttttggatg
     2401 cggtcagcat cgccaaagaa aacggcgcgt ccgtcatcgc actgacccgc aacgattcgc
     2461 ctctggcgca acttgccgac tgcgtgttga gcgttgccac acaggaaaat gccgaactct
     2521 acacgcccat ggtttcccgc ctcttgcagc ttgccgtcat cgacattctc gccatcggac
     2581 ttgccctgcg cttgggcgat gctgccagcc tgcaattgca gaaaagcaaa aaaagcatac
     2641 acaacaagca catcgattac gacaaagatt gaccttcaga cggcatccca caaatgccgt
     2701 ctgaaatgcc gaacaacggc cgtcggcggc ttgcggcagt ttccggcagc cttttcatcc
     2761 cacaacaaaa aacctcattc aggagcatat agatgaaaca ctttcacgac ttacccgcat
     2821 ggccgaaatt gtggaaccac tttgacgaca gcaaaacatt gcatatgcgc gaaatgttcg
     2881 agcaagaccc gcagcgtgcg gaacgctact ggctgcaagt cggcggactg acgctggact
     2941 actccaaaaa ccgcatcaac gacgaaacca tgtcgctttt gttcgagttg gcgcgtgaag
     3001 caggcgtgcc ggagcggatg cggcagatgt tccacggcga aaaaatcaat acgacggaaa
     3061 accgcgccgt cctccacgtc gcccttcgca accgcaccaa ttcgccgatt gtggttgacg
     3121 gtgaagatgt gatgccaaaa gtcaaccgcg ttttgcaacg tatgggcgaa tttgcacacg
     3181 aagtccgcag tggaagctgg ctgggctata ccaaccaagt cattaccgac gttgtcaaca
     3241 tcggcatcgg cggatcggat ttgggcccgt tgatgatgtg taccgcgctc aaacctttcg
     3301 gtcatccacg cctcaatatg cacttcgtct ccaacgtgga cggctcgcaa ctgcgcgacg
     3361 tattgtccaa agtccacccc gaaaccacgc tgttcattat cgcctccaaa acctttacca
     3421 cgcaggaaac gctgaccaac gcgctgaccg cgcgcgaatg gtttttgaat catgcgggcg
     3481 atgaaagcgc cgtcgccaaa catttcgttg ctgtttccac caaccaaaaa gccgttgccg
     3541 aattcggcat cgacaccgcc aatatgtttg aattttggga ctgggtcggc ggccggtaca
     3601 gcctgtggtc cgccatcgga ttgccgatta tgctgtatct cggcgaagaa aacttcatcg
     3661 aaatgctcaa cggcgcgcac ctgatggacc aacatttcat caacactccg ctcgagcgca
     3721 acctgcccgc catcctcgcc cttatcggca tctggtacat caactactac ggcggcggaa
     3781 gccacgtcat cgcaccttac gaccaacacc tccaccgcct gcccaaattc atccagcagc
     3841 tcgatatgga aagcaacggc aaacaggtta cgttggacgg caaagcagtc ggacacgaaa
     3901 cctcgccgat tatttggggc gaaacgggca tcaacggcca gcacgccttc ttccaactgc
     3961 tgcaccaagg cacgcacatc acccccatcg acctcatcgc ctcgcttgaa aaacgcagca
     4021 acctgcccgg acaccacgaa atcctgcttg ccaacgtctt cgcccaagca gaagccttta
     4081 tgcgcggcaa aacccccgac gaagtccgcg ccgaactcaa agcgcagggt atggatgagg
     4141 cgcgtatcga agagctggtt ccgcacaaaa ccttctccgg caaccgcccg accaacctca
     4201 tcctgatgga taaggtcaac ccccgcaata tgggcagcct gattgccatg tacgaacaca
     4261 aaaccttcgt acaaggcatc atttggggca tcaacagctt cgaccagtgg ggcgtggaac
     4321 tcggcaaaca actggctaaa accattttgg gcgaactgac cggcgaaacc gggccgcaaa
     4381 agcacgacag ttcgaccgaa cgcctgatca ggctttacct gcaaaccaac cgcaaataaa
     4441 acctgcggaa aaatgccgtc tgaacgccga ccgtttcaaa cggcattttt atcgaacagg
     4501 aaaaccgtcg gtaaacttgc agagcgtgtg caatcccgat atgatggttt gcataaattt
     4561 aaacatgtat gttccgcagc tatggcactg attaaagagc cgttggacaa agcgaaacaa
     4621 aggaacgaag aacttgaagc ggcagaagaa gcggcggcgc aggaggcatt gggtcgggag
     4681 caggaagtcg accgcgtatc cgaatgggaa gaacgctaca agctgtcgcg cagcgagttc
     4741 gagcaattct ggaaaggatt gcctcaaacc gtacagaata agctgcaagc ctcacagaaa
     4801 acatggaaaa gcgggatgga taaaatctgt gccaacaatg cgaaagctga aggtgaaacg
     4861 ccaaacggca taaaattcag cgaactggca tgcaaaacgg cggaaaccga agcacgcttg
     4921 gaagagctgc acaaccgtaa aaaagccctt atcgacgaaa tggccaggga agcggacaag
     4981 aaagaactgc caaagcggct ctgaacagcg cggttcaggc actgcccgcc gatattgccg
     5041 aaaccgtcat gcccgagtac cgcaactgac aaaacggttt gaatgccaaa tgcgccgacg
     5101 gcgacgaata cggcgtggca caatctgact gccgtaccag agaaatcaat gcgaaaacca
     5161 aagaaatcca aggttatctg attgactgaa acttggatgc gggaatgtcg gcggcttttg
     5221 cgtttttgtc gtttttatag tgaattaaat ttaaaccg
//
LOCUS       DAWGKF010000141         5239 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.141, whole genome shotgun sequence.
ACCESSION   DAWGKF010000141 DAWGKF010000000
VERSION     DAWGKF010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5239)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5239)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5239
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.141"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            61..1164
                     /gene="mnmA"
                     /locus_tag="WHR07_001692"
     CDS             61..1164
                     /gene="mnmA"
                     /locus_tag="WHR07_001692"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEZ2130885.1"
                     /translation="MNTTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWED
                     DDNDEYCSIKQDSFDAIAVADIIGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDV
                     LCNAEIKFKCFLDYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLK
                     PFQLERAIFPLGGLEKPEVRRLAAEFNLPTAAKKDSTGICFIGERPFREFLQKYLPTD
                     NGKMVTPEGKTVGEHVGLMFYTLGQRKGLGIGGAGEPWFVAAKDLTKNELIVVQGHDH
                     PLLYTRSLVMNDLSFTLPERPKAGRYTCKTRYRMADAPCELRYLDEETAELVFDEPQW
                     AVTPGQSAVLYDGDICLGGGIIQTTDKPVIITR"
     gene            1235..2905
                     /locus_tag="WHR07_001693"
     CDS             1235..2905
                     /locus_tag="WHR07_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEZ2130886.1"
                     /translation="MEKIWLDSYEKGVSAEIDITQYNSISDVFRQSVEKFARLPAFQN
                     MGKTLTYAETGKLATDFASYLQNVLKLPRGERVAIMMPNVLQYPIALFGILQAGLVAV
                     NTNPLYTPRELEHQLKDSGTTAIIVLENFANTLELVLPRTQIKHVIVASVGEMFGLLK
                     GSLINFIIRKIKKMVPEYRIRETVSFQTALKEGAKHVFQPVALNREDTALLQYTGGTT
                     GVAKGAVLSHGNICANMLQAKEWIKNQLREGKETVIAALPLYHIFALTVNLMIFANAG
                     SKIILITNPRDMKGFIGELKKQRINVFIGVNTLFNAMVNRPDFAEVDFSELRLTLGGG
                     MATQKAVAEKWKKITGTPIVEAYGLTEASPGVCCNPLNIESYSGSIGLPVSSTEVELR
                     DANGKEVPVGQPGELWVKGPQVMQGYWNRPEETAKAIDARGFLETGDIAVMDEKGWLK
                     LVDRKKDLIVVSGFNVYPNEIEEVIAHHGKVMEVACIGVPDEKTGEALKVFVVRKDPS
                     LTKEELIAFCRTELTAYKVPKDIEFRDELPKSNVGKILRRELRQSTGK"
     gene            3017..4651
                     /locus_tag="WHR07_001694"
     CDS             3017..4651
                     /locus_tag="WHR07_001694"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEZ2130887.1"
                     /translation="MTKFIFVTGGVVSSLGKGIAAASIAAILESRGLNVTMLKLDPYI
                     NVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIDSTMTRRNSFSTGQVYENVIAKE
                     RRGDYLGGTVQVIPHITDEIKRRIHEGAAGYDVAIVEIGGTVGDIESLPFLEAIRQMR
                     SQLGRNNTLFAHLSYVPYIAAAGEIKTKPTQHTVKEMLSIGLQPDILICRMDRTMPAD
                     ERRKIALFCNVEERAIVGSYDVDSIYECPEMLHDQGIDNIITEQLQLNVQQADLTAWK
                     KIVHAIQNPKHTVKIAMVGKYVDLTESYKSLIEALKHAGIHTETDVQITFVDSESIEK
                     NNGDVSMLKDMDAILVPGGFGSRGVEGKIAAVRYARENNVPYLGICLGMQIALIEYAR
                     DVAGLKGANSTEFDLKCAAPVVALIDEWQTADGSVETRDESADLGGTMRLGAQEVELK
                     AGSLAAKIYGSEHIRERHRHRYEVNNNYVPTLEQAGLVIGGVSAGRERLVETIELPNH
                     PWFFACQFHPEFTSNPRKGHPLFTAFVKAALNNKKA"
     gene            4879..5185
                     /locus_tag="WHR07_001695"
                     /pseudo
     CDS             4879..5185
                     /locus_tag="WHR07_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         1382 a         1450 c         1286 g         1121 t
ORIGIN      
        1 gcctttaaaa tgtgttaaaa tctgccttta aaaaccgccg tttccaacca tattctacgc
       61 atgaatacga cagcaaaccc ttccaatatc atcgtcgggc tctccggcgg tgtcgattct
      121 tccgtaaccg ccgccctgct caagcagcag ggttatcaag tgcgcggtgt gttcatgcag
      181 aactgggaag acgacgacaa cgacgaatat tgcagcatca aacaggattc gttcgatgcc
      241 atcgccgttg ccgatattat cggcatcgat atcgacatcg ttaatttcgc cgcgcaatat
      301 aaagacaaag tctttgctta ttttcttcag gaatacagtg cggggcgcac gccgaatccg
      361 gatgtgttgt gcaacgccga aatcaaattc aaatgctttt tggactacgc cgtagggcag
      421 ggcgcggata ccatcgccac cggccactat gcgcgcaaag aagttcgcaa cggcgtgcat
      481 tacctgctca aaggtttgga tcgaaacaaa gaccaaagct atttcctcta ccgcctcaag
      541 cctttccaac tcgagcgcgc gatttttccg ttgggcggtt tggaaaaacc tgaagtccgc
      601 cgccttgccg ccgaatttaa tttgccgacc gccgccaaaa aagacagcac gggcatctgc
      661 ttcatcggcg aacgcccgtt tcgcgagttt ctgcaaaaat acctgccgac cgacaacggt
      721 aaaatggtta cgcccgaagg gaaaaccgtc ggcgaacacg tcgggctgat gttctacacg
      781 ctcggacagc gcaaaggttt gggcatcggc ggcgcgggcg aaccgtggtt tgttgcggct
      841 aaagatttga cgaaaaacga actgattgtc gtgcaaggac acgaccatcc gctgctctat
      901 acccgcagcc ttgtgatgaa cgatttgagt ttcacgctgc ccgaacgccc gaaggcagga
      961 cgctatacct gcaaaacgcg ttaccgtatg gcggacgcgc cttgtgagtt gcgctatttg
     1021 gatgaagaaa ccgccgagct ggtgtttgac gaaccgcaat gggcggttac gccgggccag
     1081 tctgccgtgc tgtacgacgg cgatatctgt ttgggcggcg gcatcatcca aacgaccgac
     1141 aaacccgtca tcatcacgcg ataaaggtaa tgccgtctga aacggttttc agacggcatt
     1201 gttccgctca attccacttt aaagaccgat acctatggaa aaaatctggt tagacagtta
     1261 cgagaagggc gtcagtgccg aaatcgatat cacgcaatac aattccatca gcgatgtatt
     1321 ccgccaaagc gtggaaaaat ttgccaggct gcccgctttt caaaatatgg gcaaaacgct
     1381 gacttatgcc gaaaccggca aactggcgac tgatttcgcc tcttatctgc aaaacgtcct
     1441 caagctgccg cgcggcgaac gtgttgccat tatgatgccg aacgtattgc aatacccgat
     1501 agcccttttc ggcattttgc aggcaggttt ggtggcggtg aacaccaatc cgctctatac
     1561 gccgcgcgag ctggagcatc agctgaaaga cagcggcacg accgccatca tcgttttgga
     1621 aaatttcgcc aacacgctgg agctggtgct gccgcgcacg cagatcaaac atgtcatcgt
     1681 cgcctccgtc ggcgaaatgt tcgggctgct taaaggttcg ctgatcaatt tcatcatccg
     1741 aaaaatcaag aaaatggttc ccgaataccg tattcgggaa accgtttcct ttcagacggc
     1801 attgaaagag ggggcgaagc acgttttcca acctgtcgca ttaaaccgcg aagataccgc
     1861 gctgttgcaa tacacgggcg gcacgacagg tgttgccaaa ggggcggtgc tgagtcacgg
     1921 caacatctgt gccaatatgc ttcaggcaaa agaatggatt aaaaaccagt tgcgcgaggg
     1981 caaagaaacc gttatcgctg ccctgccgct gtaccatatt ttcgccttaa ccgtgaatct
     2041 gatgattttt gccaatgccg gctcaaaaat catcctgatt accaacccgc gtgatatgaa
     2101 aggctttatc ggagaactga aaaaacagcg gattaatgta tttatcggcg taaacacact
     2161 gtttaacgcg atggttaacc gtcctgattt tgccgaagtc gatttttcag aattgcggct
     2221 gactttgggc ggcggtatgg cgacccaaaa agccgttgcc gaaaaatgga aaaaaattac
     2281 cggtacgcct attgtcgaag cctacggtct gaccgaagcc agcccaggcg tgtgctgcaa
     2341 ccccttaaac atcgaatcat acagcggcag catcggtttg cccgtctcgt ccaccgaagt
     2401 cgaactgcgc gacgcaaacg gcaaagaagt ccccgtcggg cagccgggcg aattgtgggt
     2461 aaaaggccct caagtgatgc aaggctactg gaaccgtccc gaagaaaccg ctaaagccat
     2521 agacgcgcgc ggtttcttgg aaaccggcga tattgccgtc atggacgaaa aaggctggtt
     2581 gaagctggtt gaccgtaaga aagacctcat tgttgtttcc ggattcaatg tttatccgaa
     2641 cgaaatcgaa gaagtcatcg cgcatcacgg caaagtgatg gaagttgcct gtatcggcgt
     2701 tcccgacgaa aaaaccggcg aggcactcaa agtattcgtc gtcagaaaag acccgtcttt
     2761 gacgaaagaa gaacttatcg ccttttgccg caccgaatta accgcatata aagtaccgaa
     2821 agatatcgaa ttccgcgacg agttgcccaa gtccaacgtc ggcaaaatcc tgcgccgcga
     2881 gttgcggcaa agtaccggga aataaagaaa agatgccgtc tgaaaacagc cgtccaccgt
     2941 tcagacggca ttcgtccgtt tgccagaacc gcgcgcttca cgttaaaatc acgcattcca
     3001 atatgggtat tccatcatga ccaaattcat tttcgtaacc ggcggcgttg tctcctcact
     3061 gggtaaaggt atcgccgccg cttctattgc cgccatcctc gaatcgcgcg gcttgaacgt
     3121 taccatgctc aagctcgatc cttatatcaa cgtcgatccc ggcacgatga gcccgttcca
     3181 acacggcgaa gtgttcgtaa ccgacgacgg cgcggaaacc gacctcgact tgggacacta
     3241 cgaacgcttt atcgattcca cgatgacccg ccgcaacagc ttcagcacgg ggcaggtgta
     3301 cgaaaacgtc atcgccaaag aacgacgggg cgactatttg ggcggcacgg ttcaagtcat
     3361 tccgcacatt accgacgaaa tcaaacgccg catccacgaa ggcgcggcag gttacgatgt
     3421 ggcgattgtc gaaatcggcg gtacagtcgg cgatatcgaa tctttgccat tcttggaagc
     3481 catccgccag atgcgaagcc agttgggacg caacaacacc ctgttcgccc acttgagcta
     3541 cgtcccctac atcgccgctg caggcgaaat caaaaccaag ccgacccagc acaccgttaa
     3601 agaaatgttg agcatcggtt tgcaacccga catcctgatt tgccgtatgg acaggacaat
     3661 gcctgcggac gaacgccgca aaatcgcctt gttctgcaac gtggaagaac gcgcgattgt
     3721 cggcagctac gatgtggaca gcatctacga atgccccgaa atgctgcacg accaaggcat
     3781 cgacaacatc attaccgagc agttgcagct taatgtgcag caggcggatt tgaccgcgtg
     3841 gaaaaaaatc gtccacgcca tccaaaaccc gaaacacacc gtcaaaatcg ccatggtcgg
     3901 caaatacgtc gatttgaccg agtcctacaa atcgctgatc gaagccttga aacacgcagg
     3961 cattcacacc gaaaccgacg tacaaattac ctttgttgac agcgaaagca tcgagaaaaa
     4021 caacggcgac gtttccatgc ttaaagacat ggatgccatc ctcgttcccg gcggttttgg
     4081 ttcgcgcggc gtggaaggca aaatcgccgc tgtgcgctat gcccgcgaaa acaacgtgcc
     4141 atacttgggc atctgcctcg gtatgcagat tgcgctgatc gaatacgccc gcgacgtggc
     4201 aggtttgaaa ggtgcgaatt ccaccgagtt cgacctcaaa tgcgccgccc ccgtcgttgc
     4261 cctgattgac gaatggcaaa ctgccgacgg cagcgtcgaa acccgcgacg aatccgccga
     4321 tttgggcggc accatgcgtt tgggcgcgca agaagtcgaa ttgaaagcag gcagcctcgc
     4381 cgccaaaatc tacggcagcg aacacatccg cgaacgccac cgccaccgct acgaagtcaa
     4441 caacaactac gttcctacgc tggaacaggc aggtttggtc atcggcggcg tatccgccgg
     4501 acgcgaacgc ttggtcgaaa ccatcgaact gccgaaccat ccttggttct tcgcctgcca
     4561 gttccacccc gagtttacct ccaatccgcg caaagggcat cctttgttca ccgcgtttgt
     4621 caaagctgcg ttgaacaata aaaaagcctg ataaagcgtt acttgatgat caaaatgccg
     4681 tctgaaagcc tgaatgaaga ctttcagacg gcatttttgc aaatcgggga tcataaaagc
     4741 catcaattta atttttatgg ttttatctaa tattgaccaa ctgaatattg ttaagcgggg
     4801 cgtgaaactc aagttgagac ctttgcaaaa ttccccaaaa tcccctaaat tcccaccaag
     4861 acatttagga gatttctcat gagcaccttc tttcagcaaa ccgcacaagc catgattgcc
     4921 aaacacatcg accgcttccc actattgaag ttggaccagg tgattgattg gcagccgatc
     4981 gaacagtacc tgaatcgtca aagaacccat ttaccttaga gaccaccgcg gccgtcccgc
     5041 ctatccgctg ctatccatgt tcaaagccgt cctgctcgga caatggcaca gcctctccga
     5101 tcccgaactc gaacacagcc tcatcacccg catcgacttc aacctgtttt gccgtttcga
     5161 cgaactgagc atccctgatt acagtatagt ggattaacaa aaaccagtac agcgttgcct
     5221 cgccttagct caaagagaa
//
LOCUS       DAWGKF010000142         5162 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.142, whole genome shotgun sequence.
ACCESSION   DAWGKF010000142 DAWGKF010000000
VERSION     DAWGKF010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5162)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5162)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5162
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.142"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            397..5103
                     /gene="iga"
                     /locus_tag="WHR07_001696"
     CDS             397..5103
                     /gene="iga"
                     /locus_tag="WHR07_001696"
                     /EC_number="3.4.21.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgA-specific serine endopeptidase
                     autotransporter"
                     /protein_id="HEZ2130888.1"
                     /translation="MKTKRFKINAISLSIFLAYALTPYSEAALVRDDVDYQIFRDFAE
                     NKGKFFVGATDLSVKNKQGQNIGNALSNVPMIDFSVADVNRRTLTVIDPQYAVSVKHV
                     KGDEISYYGHHNGHLDVSNDENEYRSVAQNDYEPNKNWHHGNQGRLEDYNMARLNKFV
                     TEVAPIAPTSAGGGVETYKDKNRFSEFVRVGAGTQFEYNSRYNMTELSRAYRYAIAGT
                     PYQDVNVTSNLNQEGLIGFGDNSKHHSPEKLKEVLSQNALTNYAVLGDSGSPLFAYDK
                     QEKRWVFLGAYDYWAGYQKNSWQEWNIYKKEFADKIKQRDNAGTIKGNGEHHWNITFG
                     TNSKIGSTAVRLAGNEKDANNGQNVTFEDNGTLVLDQNINQGAGGLFFKGDYTVKGIN
                     NDITWLGAGIDVTDGKKVVWQVKNPNGDRLAKIGKGTLEINGTGVNQGQLKVGDGTVI
                     LNQQADADKKVQAFSQVGIVSGRGTLVLNSSNQINPDNLYFGFRGGRLDANGNDLTFE
                     HIRNVDEGARIVNHNTSHASTITLTGKSLITNPNSLSVHSIQNDYDEDDYSYYYRPRR
                     PIPQGKDLYYKNYRYYALKSGGSVNAPMPENGVTENNDWVFMGYTQEEAKKNAMNHKN
                     NQRISGFSGFFGEENGKGHNGALNLNFNGKSAQNRFLLTGGTNLNGKISVTQGNVLLS
                     GRPTPHARDFVNKSSARKDAHFSKNNEVVFEDDWINRTFKAAEIAVNQSASFSSGRNV
                     SNITANITATDNAKVNLGYKNGDEVCVRSDYTGYVTCNTGNLSDKALNSFGATQINGN
                     VNLNQNAALVLGKAALWGQIQGQGNSRVSLNQHSKWHLTGDSQVHNLSLADSHIHLNN
                     ASDAQSANQYHTLKINHLSGNGHFHYLTHLAENLGDKVLVKESASGHYQLHVQDKTGE
                     PNQEGLNLFDASSVQDRSRLSVSLANNHVDLGALRYTIKTENGITRLYNPYAENRRRV
                     KPVPSPATNTASQAQTDSAQIAKPQNIVVAPPSPQANQAEEAKRQQAKAEQVKRQQAE
                     AERKSAELAKQKAEAEREARELATRQKAEQERSSAELARRHEKEREAAELSAKQKVEA
                     EREAQALAVRRKAEAEEAKRQAAELARQQEEARKAAELAAKQKAETERKAAEIAEQKA
                     EAEREAAELAKQKAEEEGRQAAQSQPKRRNRRAIPPELSSDATTRALPRIARNSNPDA
                     SDYEEIPLDALEDEDVSESVDTSDKQPQDNTELHEKVETVSLQPRAAQPRAQAAAQPQ
                     AQAAAQPQAQAVAQADAVSTNTNSALSDAMASTQSILLDTGASLTRHIAQKSRADAEK
                     NSVWMSNIGYGRDYASAQYRRFSSKRTQTQIGIDRSLSENMQIGGVLTYSDSQHTFDQ
                     ASGKNTFVQANLYGKYYLNDAWYVAGDIGAGSLRSRLQTQQKANFNRTSIQTGLTLGN
                     TLKINQFEIVPSAGIRYSRLSSADYKLGNDSVKVSSMSVKTLTAGLDFAYRFKVGNLT
                     VKPLLSAAYFANYGKGGVNVGGNSFAYKADNQQKYSAGAALLYRNVTLNVNGSITKGK
                     QLEKQKSGQIKIQIRF"
BASE COUNT         1741 a         1209 c         1121 g         1091 t
ORIGIN      
        1 acggaaacct gcaccgcgtc attcccacga acccacatcc cgtcattacc acgaaagcgg
       61 gaatctagga cgcagggtta agaaaaccta catcccgtca ttccctcaaa aacagaaaac
      121 caaaatcaga aacctaaaat cccgtcattc ccgcaaaagc gggaatccaa aaacaaaaag
      181 ccgcagaaat ttaacggaag aaccgaaccc cgaaaatcgg cttcccgcct tcgcttgaat
      241 aacagaacaa aggaagcgga aataaaaaca tcgggattct ttttttaaat tggcaataaa
      301 acaccaaaat taatgattca cacaacaaaa aatagtcaac accgccaaac cggcgtaaaa
      361 tacaaaacat tatcaccctt aaaacggtaa aaccttatga aaaccaaacg ttttaaaatt
      421 aacgccatat ccttatccat ctttcttgcc tatgccctta cgccatactc agaagcggca
      481 ttggtcagag acgatgtcga ttatcaaata ttccgtgact ttgcagaaaa caaaggcaaa
      541 ttttttgtcg gcgcaaccga tttatcagtg aaaaacaaac aaggtcaaaa catcggcaac
      601 gcattatcca acgtaccgat gattgatttt agcgttgcag atgtcaacag acgtacatta
      661 accgtcatcg atccccagta tgccgtcagc gtcaaacatg taaaaggaga cgaaatctct
      721 tattacgggc atcacaatgg gcacttagat gttagcaatg atgaaaacga atatcgttca
      781 gttgcacaaa atgactacga accaaataaa aattggcatc acggtaatca aggtcgtctt
      841 gaagactaca acatggcacg ccttaataaa ttcgtaacag aagtcgcacc tattgcacca
      901 accagtgcag gcggcggcgt tgaaacctat aaagataaaa accgtttttc tgagtttgtg
      961 cgagttggag caggtacgca atttgaatat aacagccgct acaatatgac agagctttca
     1021 cgagcttatc gttatgccat tgcaggtacg ccttatcaag acgtgaatgt cacatcgaat
     1081 ctaaatcaag aaggcttgat tggcttcggt gataattcaa aacatcattc cccagaaaaa
     1141 ctcaaagaag ttttatctca aaacgcattg actaactatg ctgtgttagg cgatagcggt
     1201 tcaccattat ttgcttatga taaacaagaa aaacgctggg tctttttagg tgcttacgat
     1261 tattgggcag gctatcaaaa aaactcttgg caagaatgga atatctataa aaaagaattt
     1321 gcagataaaa tcaaacaacg cgataacgcc ggcaccatca aaggtaatgg agaacatcat
     1381 tggaacatta cttttggcac aaacagcaag attggttcta cagcggtaag gcttgccggc
     1441 aatgaaaagg atgcaaacaa cggacagaat gttacctttg aagacaacgg cactttggta
     1501 ttggatcaaa acatcaacca aggcgcgggc ggtctgtttt tcaaaggcga ttacacagtc
     1561 aaaggtataa ataatgacat cacttggcta ggtgcgggga ttgatgttac cgacggcaaa
     1621 aaagtcgttt ggcaagtcaa aaatccgaat ggcgacagat tggcaaaaat cggcaaaggc
     1681 acattagaaa taaacggcac aggcgttaac caagggcaat taaaagtcgg cgacggtacg
     1741 gttattctga atcaacaagc cgatgccgac aaaaaagtcc aggctttctc ccaagtcggc
     1801 attgtcagcg gacgcggtac attggtatta aatagttcaa atcagattaa tcccgataac
     1861 ctatatttcg gtttccgtgg cggtcgtttg gatgccaatg gcaatgactt gacttttgaa
     1921 cacatccgca acgtggatga aggcgcgcgc attgtcaacc acaacacaag ccacgcctcc
     1981 acaatcacgc taacgggtaa atctttaatt accaatccga acagcctttc ggtacatagc
     2041 atacaaaatg actatgacga agatgattat agttattact accgaccaag gcgcccgatt
     2101 ccgcaaggca aagaccttta ttacaaaaac tatcgttatt acgccctaaa atccggcggc
     2161 agcgtgaacg caccgatgcc cgagaacggt gtaacagaaa ataacgactg ggtctttatg
     2221 ggatatacgc aagaagaagc caagaaaaac gcgatgaacc acaaaaacaa tcagcgtatt
     2281 agcggtttta gcggtttctt tggcgaagaa aacggaaaag gacataacgg tgcattaaac
     2341 cttaatttca acggcaaaag cgcgcaaaac cgtttcttgt taacaggcgg cactaattta
     2401 aacggaaaaa taagcgtaac tcaaggcaat gtcttgttat caggtcgtcc aacaccacac
     2461 gcaagagatt ttgtgaacaa atcttcagcc cgaaaagacg cacatttctc caaaaacaat
     2521 gaagtcgtat ttgaagacga ctggataaac cgcacattca aagccgcaga aattgcggtt
     2581 aatcaatccg catcattctc ttccggtaga aatgtatcca acattaccgc caacatcacc
     2641 gcgacagaca acgccaaagt aaatttgggt tacaaaaacg gcgatgaggt ttgcgtgcgc
     2701 tcggactata ccggttatgt tacctgcaac acaggcaact tatccgataa ggctttaaac
     2761 agctttggag cgacacagat taacggcaat gtgaatctga accagaatgc ggcattggtc
     2821 ttgggcaagg ctgcattatg ggggcaaatt caagggcaag gaaacagccg tgtcagccta
     2881 aaccaacata gcaaatggca tttgactggc gacagccaag tacacaatct gtcattggcg
     2941 gatagccata ttcatttgaa caatgcctcc gatgcgcaaa gtgcaaatca ataccacacg
     3001 ctcaaaatca atcatttatc cggtaacggg cattttcatt atctgacgca cttggcggaa
     3061 aatcttgggg ataaagtgct tgtgaaggaa tccgcatccg gtcattatca gctccatgtt
     3121 caagataaaa caggcgaacc caatcaggaa gggctgaatc tctttgatgc atcatccgta
     3181 caagaccgct cccgcctttc tgtttccttg gcgaataacc atgtagattt aggcgcattg
     3241 cgttatacaa tcaaaacaga aaacggtatt acccgattgt acaatcctta tgccgagaac
     3301 cgccgccgag tcaaaccggt cccgtctcct gccacaaaca cggcttctca agcacaaacg
     3361 gacagtgcac aaattgccaa gcctcaaaat atcgtcgtcg caccgcctag cccgcaggca
     3421 aatcaagccg aagaagcaaa acgccaacaa gcaaaagcgg agcaagtgaa gcgtcagcaa
     3481 gcagaagcag agcgtaaatc ggcagagtta gcaaaacaaa aagcagaagc cgaacgcgaa
     3541 gcaagagagc tggcgacccg ccaaaaagca gaacaagaac gcagcagcgc cgaacttgca
     3601 cgtcgacatg aaaaagaacg cgaagcggca gagttgtcgg caaaacaaaa agtcgaagcc
     3661 gaacgtgagg ctcaagcatt ggcggtacgc cgaaaagcag aagccgaaga ggcaaaacgc
     3721 caagctgcag agcttgcacg ccaacaagaa gaagcacgaa aagctgcaga gttggctgct
     3781 aagcaaaaag cggaaactga acgcaaagca gcagaaattg ccgagcaaaa agcggaagcc
     3841 gaacgtgaag ccgccgaact tgccaagcaa aaggcggaag aagaaggtcg ccaagcagca
     3901 caatctcaac ccaaacgtcg taaccgcagg gctataccac cggaactgtc atctgatgca
     3961 acaacccgag ctttgcctag gatagcgaga aattcaaatc ctgatgccag cgattatgaa
     4021 gaaatcccct tggatgcgtt ggaagatgaa gatgtatccg aatcggttga cacatcagac
     4081 aaacagcctc aagacaatac ggaacttcat gaaaaagttg agacagtgag tttgcaacca
     4141 agagccgcgc agccgcgagc tcaagccgcc gcgcagccgc aagcccaagc cgccgcgcag
     4201 ccgcaagccc aagccgtcgc gcaagccgat gcagtcagca ccaataccaa ctcggcttta
     4261 tctgacgcaa tggcaagcac gcaatctatc ttgttggata caggtgcttc attaacacgg
     4321 cacattgcac aaaaatcacg tgctgatgcc gaaaaaaaca gcgtttggat gtcgaacatc
     4381 ggttatggcc gtgattatgc ttccgcacaa tatcgccggt ttagttcgaa acgcacgcaa
     4441 acacaaatcg gcattgaccg cagcttgtcc gaaaatatgc agataggcgg cgtattgact
     4501 tactctgaca gtcagcatac ttttgatcag gcgagcggca aaaatacttt tgtgcaagcc
     4561 aacctttatg gtaagtatta tttaaatgat gcttggtatg tggccggcga tattggtgca
     4621 ggcagcttga gaagccggtt acaaacacag caaaaagcaa actttaaccg aacaagtatc
     4681 caaaccggcc ttactttggg caatacgctg aaaatcaatc aattcgagat tgtccccagt
     4741 gcgggaatcc gttacagccg cctgtcatct gcagattaca agttgggtaa cgacagtgtt
     4801 aaagtaagtt ctatgtcagt gaaaacactg acggccggac tggattttgc ttatcggttt
     4861 aaagtcggca accttaccgt aaaacccttg ttatctgcag cttactttgc caattatggc
     4921 aaaggcggcg tgaatgtggg cggtaattcc ttcgcctata aagcagataa tcaacagaaa
     4981 tattcagcag gtgccgcgtt actgtaccgt aatgttacat taaacgtaaa tggcagtatt
     5041 acaaaaggaa aacaattgga aaaacaaaaa tccggacaaa ttaaaataca gattcgtttc
     5101 taaaatacta aattcatagc aaaataaaat gccgtctgaa ctcaggcttc agacggcatt
     5161 tt
//
LOCUS       DAWGKF010000143         5013 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.143, whole genome shotgun sequence.
ACCESSION   DAWGKF010000143 DAWGKF010000000
VERSION     DAWGKF010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5013)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5013)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5013
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.143"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(244..2520)
                     /locus_tag="WHR07_001697"
     CDS             complement(244..2520)
                     /locus_tag="WHR07_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ2130889.1"
                     /translation="MAQTTLKPIVLSILLINTPLLAQAHETEQSVDLETVSVVGKSRP
                     RATSGLLHTSTASDKIISGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTG
                     RRIKVLNHHGETGDMADFSPDHAIMVDSALSQQVEILRGPVTLLYSSGNVAGLVDVAD
                     GKIPEKMPENGVSGELGLRLSSGNLEKLTSGGINIGLGKNFVLHTEGLYRKSGDYAVP
                     RYRNLKRLPDSHADSQTGSIGLSWVGEKGFIGAAYSDRRDQYGLPAHSHEYDDCHADI
                     IWQKSLINKRYLQLYPHLLTEEDIDYDNPGLSCGFHDDDDAHAHAHNGKPWIDLRNKR
                     YELRAEWKQPFPGFEALRVHLNRNDYHHDEKAGDAVENFFNNQTQNARIELRHQPIGR
                     LKGSWGVQYLGQKSSALSAIPETVKQPMLIDNNVRHYSFFGVEQANWDNFTLEGGVRV
                     EKQKASIQYDKALIDRENYYNQPLPDLGAHRQTARSFALSGNWYFTPQHKLSLTASHQ
                     ERLPSTQELYAHGKHVATNTFEVGNKHLNKERSNNIELALGYEGDRWQYNLALYRNRF
                     GNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSGADFYGAEGEIYFKPTPRYRIGVSGD
                     YVQGRLKNLPSLPGREDAYGNRPFIAQDDQNAPRVPAARLGIHLKASLTDRIDANLDY
                     YRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEWNWYVKADNLLNQSVYAHSSFL
                     SDTPQMGRSFTGGVNVKF"
     gene            2942..3532
                     /locus_tag="WHR07_001698"
     CDS             2942..3532
                     /locus_tag="WHR07_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEZ2130890.1"
                     /translation="MLLFIDNYDSFTYNIVQYFTELGQEVAVRRNDDITLEEIEALNP
                     QYLVIGPGPCSPKEAGISVAAMRHFAGRLPIMGVCLGHQTIGEAFGGRIVRAKTLMHG
                     KVSPVSHSGKGMFKGLPNPVTCTRYHSLVIDRNTMPECLEVTAWTEDGEIMGVRHKEY
                     AVEGVQFHPEALLTEHGHDMLNNFLVEFQNFKPQKI"
     gene            3596..4654
                     /gene="trpD"
                     /locus_tag="WHR07_001699"
     CDS             3596..4654
                     /gene="trpD"
                     /locus_tag="WHR07_001699"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HEZ2130891.1"
                     /translation="MITPQQAIERLISNNELFYDEMTDLMRQMMSGKVPPEQIAAILT
                     GLRIKVETVSEITAAAAVMREFATKVPLENAEGLVDIVGTGGDGAKTFNISTTSMFVA
                     AAAGAKVAKHGGRSVSSSSGAADVVEQMGANLNLTPEQVAQSIRQTGIGFMFAPNHHS
                     AMRHVAPVRRSLGFRSIFNILGPLTNPAGAPNQLLGVFHTDLCGILSRVLQQLGSKHV
                     LVVCGEGGLDEITLTGKTRVAELKDGKISEYDIRPEDFGIETRRNLDEIKVANTQESL
                     LKMNEVLEGREGAARDIVLLNTAAALYAGNVAASLSDGISAAREAIDSGRAKSKKEEF
                     VGFQPQQRCHFLGKMELG"
     gene            complement(4806..>5013)
                     /locus_tag="WHR07_001700"
     CDS             complement(4806..>5013)
                     /locus_tag="WHR07_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003792345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ2130892.1"
                     /translation="TVVVPNAQSATLLPIIRKKVKPDGIVYTDTFRSYDVLDISEFSH
                     LRKFNGIPKEHLGLHLKKCQWHFK"
BASE COUNT         1142 a         1149 c         1426 g         1296 t
ORIGIN      
        1 ctgaaaccga atgaattgga ttcccgcctg cgtgggaatg atgggatctt gggtttttgc
       61 ttttgatttt tctgcttttg cgagaatgac ggcgtgaaag caagaatgat gaaacaaaaa
      121 aaatgggaat gatggcatag tggtttgttc tttgtctttg ccatatttcc taacaaattg
      181 attaaaaaga aaaaaggttt tcagaatgcc gtctgaaaac cttttttgtt tgcctgtccg
      241 attttaaaac ttcacgttca cgccgccggt aaagctgcgg cccatttgcg gcgtatcaga
      301 gaggaagctg ctgtgggcgt aaacggattg gttgagcagg ttgtcggctt tgacgtacca
      361 attccactcg ccatagcgcg tattgcggcg gtagtttgcg ccgaggttga gcatatggtg
      421 tccgggcgtg cgcgtttcgt agcgggcgag tttgttttgg gcgaacacgc ggtagtagtc
      481 caaattggca tcgatacggt cggtcagcga ggctttcagg tggatgccga ggcgcgcagc
      541 cggaacgcga ggcgcgtttt ggtcgtcctg tgcaatgaaa ggacggttgc cgtaagcatc
      601 ttccctgccg ggtagggatg gcaggttttt cagacggcct tgtacatagt cgccggaaac
      661 gccgatgcgg tagcgcggtg tgggcttgaa gtagatttcg ccttctgcac cgtagaagtc
      721 cgcaccggat tggttgtagc gcacgagctt catttcgctg tcgtcttcga tggatttggg
      781 gccgcgtccg tcgtttaagg tttgggcgta aatgtagttg ccgaaacggt tgcggtagag
      841 tgccagattg tattgccagc ggtcgccttc gtagcccagc gcgagttcga tgttgttgga
      901 acgctcttta ttgaggtgtt tgttgccgac ttcaaaagtg ttggtggcga cgtgcttgcc
      961 gtgtgcgtac agctcttgcg ttgacggcag gcgttcctga tgggaggcgg tcagactgag
     1021 tttgtgttgt ggcgtgaaat accagttgcc cgaaagtgcg aacgagcggg cggtttggcg
     1081 gtgcgcgccg aggtcgggca ggggttggtt gtagtagttt tcccgatcaa tcaatgcttt
     1141 gtcgtactgg atggaggctt tttgtttttc cacgcgtacg ccgccttcaa gcgtgaagtt
     1201 gtcccagttt gcctgttcta caccgaaaaa gctgtaatgg cgtacattgt tgtcaatcaa
     1261 catcggttgt ttgacggttt cgggaatggc ggaaagcgcg ctggattttt gtcccaaata
     1321 ttgcacgccc cagctgcctt tcagacggcc tatgggttgg tggcgcaact cgatacgggc
     1381 gttttgcgtt tggttgttaa aaaagttttc gactgcatcg cctgcttttt cgtcgtggtg
     1441 gtagtcgttg cggttcaggt gtacgcgcag ggcttcaaaa ccggggaatg gctgcttcca
     1501 ttcggcgcgg agttcgtagc gtttgttgcg caggtctatc caaggtttgc cgttgtgggc
     1561 atgggcgtgt gcatcatcgt cgtcgtgaaa gccgcagctc aagcccggat tgtcgtaatc
     1621 gatgtcttct tcggtcaaca ggtgcggata aagctgcaaa tagcgtttgt taatcaaact
     1681 cttttgccag atgatgtcgg cgtggcaatc atcgtattcg tggctgtggg caggcagacc
     1741 atattggtcg cgacggtcgc tgtatgctgc gccgataaag cctttttcgc caacccaaga
     1801 cagcccgatg ctgcccgttt gcgaatcggc gtggctgtcg ggcaggcgtt tcagattgcg
     1861 gtaacgcggt acggcgtaat cgcccgattt gcggtacaag ccttccgtgt gcaatacaaa
     1921 gtttttgccc aaaccgatat tgatgccgcc ggacgtgagt ttttccagat tgccgctgct
     1981 caaacgcaat ccgagttcgc ccgatacgcc gttttcaggc attttttcgg ggattttgcc
     2041 atcggcaaca tcgaccagcc ccgccacatt gcccgagctg tacaagagcg taaccggacc
     2101 gcgcaggatt tcgacctgtt gcgacaaggc gctgtccacc atgattgcat ggtctggaga
     2161 gaagtccgcc atgtcgcccg tttcgccgtg atggttcaac actttaatcc gcctgcctgt
     2221 ttgaccgcga atgacgggag cagacgcgcc gccgccgtat tgcgaagcgt ggatgcccgg
     2281 tacgccgtct aaagcgtcgc ccaagttgac ggctttttgg cgcaaggtat cgccggagat
     2341 gattttgtcg gaggcggtcg aagtgtgcaa cagccccgac gtggcgcgcg gacggctttt
     2401 gccgacgacg ctgaccgttt ccaaatccac cgattgctca gtttcatgcg cttgggcgag
     2461 gaggggtgtg ttgattaaaa gaattgataa aacaatgggt ttgagtgtag tttgtgccat
     2521 tttggcttct cgtcgcattt caaaagtttg ttattatata acattgcatt ccttatatca
     2581 taagattttg agaacactca gagggcatag gcaaaagttt ttcaaatgaa acggttgcgg
     2641 catcgggcgg tgtccatttg tatccgccgt ccttcggggg cgcggttgat gttgacgcag
     2701 attccgctgt gtttgcccat tatgttcggc tgcgggataa ccaaaattta tgagtgcata
     2761 aaaacggcac gttcccgaac ggtcgaaaag gtggcaaaat ggcgtacttg tcagaacgcg
     2821 aggctctgcg ccaggttcac gagggcgcat cgggcacgct aagatataag agggtatgga
     2881 tgggggtatc ggaaatgcag ttaataacaa acaaattata aatcaatagg ttaatcacaa
     2941 aatgcttttg tttatcgaca attacgacag ttttacttac aacatcgtcc agtatttcac
     3001 tgaattgggg caggaagttg ccgtgcgccg caacgatgat attacgttgg aggaaatcga
     3061 ggcattgaat ccgcaatatc tcgttatcgg ccccggcccg tgttcgccca aagaagcggg
     3121 gatttccgtg gcggcgatgc gccatttcgc cggccggctg ccgattatgg gcgtgtgcct
     3181 cgggcatcag acgataggcg aggcgttcgg cggcaggata gtccgcgcca aaacgctgat
     3241 gcacggtaag gtgtcgcccg tgtcccattc gggcaagggt atgtttaagg gtttgcccaa
     3301 tccggttacc tgtactcgtt atcacagcct cgttatcgat cggaatacga tgcccgaatg
     3361 tttggaagta acggcttgga ctgaggacgg cgagattatg ggtgtgcgcc ataaggaata
     3421 tgccgtcgag ggcgtgcagt tccaccccga agctctgctg accgaacacg gacatgatat
     3481 gttaaacaat tttttagttg aatttcaaaa cttcaaaccg caaaaaatct gacgtgatgc
     3541 cgtctgaatc ccttcagacg gcattttcgt ccgaatattg aacggaggac aaaaaatgat
     3601 tacaccgcaa caggctatcg aacgattaat cagcaataat gagttgtttt acgatgaaat
     3661 gaccgacttg atgcgccaaa tgatgagcgg aaaagtgccg cccgaacaaa ttgcggcgat
     3721 tttgacagga ttgcgtatca aggttgaaac cgtttccgaa attaccgcag ctgcagccgt
     3781 catgcgtgag tttgcgacaa aagtgccgct ggagaatgca gaggggctgg tcgatatcgt
     3841 cggtacgggc ggggatggcg cgaaaacctt caatatttcg acgacttcga tgtttgttgc
     3901 cgcagcggca ggcgcgaagg ttgccaaaca cggaggccgg tcggtctctt cctccagcgg
     3961 tgcggctgac gtggtggagc agatgggcgc aaacctcaac ctgactcccg aacaggttgc
     4021 ccaaagtatc aggcagaccg gcatcgggtt tatgttcgcg cccaatcacc acagtgccat
     4081 gcgccatgtc gcccctgtac gccgttcgct cggtttccga agtattttca acatattggg
     4141 tccgttaacg aatcctgcgg gcgcgccgaa ccagcttttg ggcgtgttcc acaccgattt
     4201 gtgtggcatt ttgtcgcggg tcttgcaaca acttggttca aaacacgttt tggttgtttg
     4261 cggggagggc ggtttggatg aaattacact gacgggcaaa acacgcgttg ccgagctcaa
     4321 agacggaaaa atcagcgaat acgacatccg cccagaagat ttcggtatcg aaacccgccg
     4381 caatttggat gaaatcaaag ttgccaatac tcaggaatct ttgttgaaaa tgaatgaggt
     4441 gctggaagga agagaagggg ctgcgcgcga tatcgtattg ctcaacaccg ccgccgccct
     4501 gtatgccgga aatgtcgctg cttcgctttc agacggcata tctgccgcac gggaagccat
     4561 cgattcaggc agggccaaat cgaaaaaaga ggagtttgtc ggttttcaac cacaacaaag
     4621 atgccatttt cttggaaaga tggagcttgg gtgatgccgc catgattatg gaacttttgt
     4681 ggcaaaacat aagcacttca cgaagagaac ttaccaaact gtttttatat aaaaacttgg
     4741 ggctgtacta gataaccaga ccaaattccc attaactaat tgtcttaaaa tctgaatttg
     4801 agattctatt taaaatgcca ttggcatttc tttaaatgca gccccaaatg ctctttggga
     4861 atgccgttaa acttacgtaa atggctaaat tcactaatat caagcacatc ataactacga
     4921 aaggtatccg tgtatacaat gccatcaggc ttaactttct ttcggataat tggcaacaat
     4981 gtcgctgatt gcgcattagg aacaacgacg gta
//
LOCUS       DAWGKF010000144         4912 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.144, whole genome shotgun sequence.
ACCESSION   DAWGKF010000144 DAWGKF010000000
VERSION     DAWGKF010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4912)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4912)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4912
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.144"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(614..1150)
                     /locus_tag="WHR07_001701"
     CDS             complement(614..1150)
                     /locus_tag="WHR07_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEZ2130893.1"
                     /translation="MDLREVKLGGETIYEGGFVSISKDKVRLPNGNEGQRIVIRHPGA
                     ACVLAVTDEGKVVLVRQWRYAANQATLELPAGKLDVAGEDMAACALRELAEETPYVAD
                     SVRLLYSFYTAVGFCNEKMYLFEAEGVRLGSTLANDEDEITETVLMSKEEVRQALAND
                     EIKDGKTLIGLQYWLMKD"
     gene            complement(1184..1540)
                     /gene="folB"
                     /locus_tag="WHR07_001702"
     CDS             complement(1184..1540)
                     /gene="folB"
                     /locus_tag="WHR07_001702"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEZ2130894.1"
                     /translation="MDKIFLHGMKADTLIGVYGWERERLQTLIVDLDIGVPEKAGSDD
                     DIANTVHYAEVCETLRRHLKEQDFLLLEALAEYIADLVLGYFGAVWVRVKIVKPGILE
                     GVREVGVEIERGKRED"
     gene            1596..2198
                     /gene="plsY"
                     /locus_tag="WHR07_001703"
     CDS             1596..2198
                     /gene="plsY"
                     /locus_tag="WHR07_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEZ2130895.1"
                     /translation="MFNIPAVAVSYLIGSLSFAVIVSKYYGMDDPRTYGSGNPGATNV
                     LRSGKKKAAVLTLLGDAAKGLVAVLLARVLQEPLGLSDSAIAAVALAALVGHMWPVFF
                     GFKGGKGVATALGVLLALSPATALVCALIWLVMAFGFKVSSLAALTATIAAPLAALFF
                     MPHLSWIWATLLIALLVLFRHKSNISNLLKGKEGKIGEKR"
     gene            2286..3131
                     /locus_tag="WHR07_001704"
     CDS             2286..3131
                     /locus_tag="WHR07_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HEZ2130896.1"
                     /translation="MLSYRHAFHAGNHADMLKHFTLFLVLQYFNRKDKPYWYIDTHGG
                     AGVYNLEGSEAQKVGEYRQGIALLRQAKNLPTELNGFIAHIQKILPSPKLYCGSPWLA
                     QSLTRVGDKLRLFELHPTDFVHLQNNMGEAGLGKRGQVLREDGYKELISLLPPPPRRA
                     TVLIDPPYEEKQDYRRVTETLKAALKRFESGCYLIWYPCLSREESRKLPEELKKLLPD
                     NYLHAELHVHAPKADGFGMHGSGMFVINPPYLLAEQLAANLPALTRLLAQDEGARYLL
                     DSKIR"
     gene            3377..4351
                     /locus_tag="WHR07_001705"
     CDS             3377..4351
                     /locus_tag="WHR07_001705"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HEZ2130897.1"
                     /translation="MDTLTRFLPEHLQQNQLPEALGGVLLSVVSACTEINAKVRLGAL
                     AGVLGMAGTGNIQGEDQKKLDVIANNIMIDTLKANPAVAGLASEEEDSFVSAGENGRY
                     LVLFDPLDGSSNIDVNISVGTIFSILEKPEGALATESFLQTGRQQLAAGYVLYGPQTQ
                     LVFTFGHGVYMFTLNAENEFVLTKEKPKVPESTKEFAINMSNRRHWLPPVQQYIDELL
                     AGETGTRGKNYNMRWVASMVAEIHRILMRGGVFMYPQDKRDPSKPGKLRLMYEANPMA
                     LILEQAGASASNARQDILGIRPESLHQRVAVIMGSSEEVDYLNRLHSK"
     gene            complement(4510..4728)
                     /locus_tag="WHR07_001706"
     CDS             complement(4510..4728)
                     /locus_tag="WHR07_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HEZ2130898.1"
                     /translation="MFPEYRDLISKLKQENSRFARLFDEHNELDDKITGLVNNPVTSG
                     AETIDELKKAKLKLKDELYAILQKAAGK"
BASE COUNT         1273 a         1435 c         1016 g         1188 t
ORIGIN      
        1 aagtatccat atattctatc tttaattatt tcattatttt cttcattttc ttcatctaaa
       61 aatatacatc tttttaatag ttccccatta aattcataaa catcgtaata agctttaaaa
      121 atagatatca tatcatttcc ttatcttcca taaatcggct tcggttgttt aaataccgcc
      181 cgtgccaatt accgttctca aattcaaatt gggcttttag gtctataaca aagaaaaagc
      241 cttggtagga taaacctacc aaggcttttt cttaaaaaaa cgctctatta ccgtgcctaa
      301 aaatgcaaaa aagtaaccgt cataaccctt ttgccaaaat caatatcatc atccgatgaa
      361 tgaattgacg gtatataaga aagaattaat aagctcataa accggtaaga aaaatcagta
      421 acaaagatat tcattattaa ccattcttaa aaatgatcat gttcgtttgg gtaattatca
      481 tacccttttc cctcttatta ctaaagcacg aatgacttta aaggacgcgc ccagagacaa
      541 gccgaaaagg catatcccat ccgccaaaca aaatgcccgc cgacttactc cggcgggcag
      601 ctccaacacc ctgtcaatcc ttcatcagcc agtattgcaa accgattaat gtcttgccgt
      661 ctttaatttc atcgtttgcc aatgcctgac ggacttcctc cttcgacatc aatacggttt
      721 ccgtaatctc gtcttcgtca ttggcaagcg tactgcccaa gcgtacgcct tccgcctcga
      781 acagatacat tttttcgttg caaaaaccga ccgccgtata aaaactgtac aacaggcgta
      841 cactgtcggc aacataaggc gtttcctccg ccaattctcg cagcgcacac gctgccatat
      901 cctcgcccgc cacatccagc ttgcccgcag gaagttccaa tgtcgcctga tttgccgcat
      961 accgccactg ccgtaccaaa accactttcc cctcgtccgt aaccgccaac acgcatgccg
     1021 caccgggatg acggatgacg atacgctgcc cttcgttacc gttgggcaac ctgaccttat
     1081 ccttgctgat gctgacgaaa ccgccctcgt aaatggtttc gccgcctaat tttacttccc
     1141 tcaaatccac ttcatatctc ctttccgttt cctattctgc cgttcaatct tcacgcttgc
     1201 cgcgctcgat ttccacgcca acctcgcgca cgccttccaa aatacccggc ttgacgattt
     1261 tcacgcgcac ccacaccgcg ccgaaatatc ccaaaaccaa atcggcaata tattccgcca
     1321 acgcttccaa aagcaggaaa tcctgttctt tcagatgtcg gcgcagcgtt tcgcatacct
     1381 cggcataatg caccgtattg gcaatatcgt cgtccgaacc cgctttctcg ggaacgccga
     1441 tgtccaaatc gacaatcagg gtctgcaacc gttcgcgttc ccagccgtac acgccgataa
     1501 gcgtatctgc cttcatgccg tgcaaaaaga ttttatccat aatccgcccc gttttttgct
     1561 aaaataaccg caccattcta agtaaagtac cgcaaatgtt caacataccg gctgttgctg
     1621 tttcctatct gatcggctca ctttctttcg ccgtcatcgt gtccaagtat tacggcatgg
     1681 acgacccgcg cacctacgga tcgggcaatc cgggggcaac caatgtttta cgcagcggca
     1741 aaaaaaaggc ggccgtgctg acgctcttgg gcgatgccgc caaaggtttg gttgccgttt
     1801 tgcttgcacg cgtgcttcaa gaaccgctcg gtttatccga cagcgcaatc gctgccgtcg
     1861 cactcgccgc gctggtcggg catatgtggc cggtgttttt cggatttaag ggcggcaaag
     1921 gcgtggcaac ggcattgggc gtgcttttgg cactctctcc cgcaactgcc ttggtctgcg
     1981 cgttgatttg gcttgttatg gcattcggct tcaaggtgtc ctcccttgcc gcattaaccg
     2041 ccacaatcgc cgcccccctt gctgcgctgt tttttatgcc ccacctttct tggatttggg
     2101 cgacgctcct tatcgccctg ctggtgttgt tccgccacaa aagcaatatc agcaacctgc
     2161 ttaaaggcaa agaaggcaaa atcggcgaaa aacgctgatt cggcatttgt tttccattac
     2221 gtcatgccgt ctgaaaccat atttccgcgt tcagacggca tttccgcaca aacggctttc
     2281 ataccatgct cagttacaga cacgcattcc acgccggcaa ccacgccgat atgctcaaac
     2341 acttcacctt gtttttagtg ctgcaatatt tcaaccgcaa agacaagccc tactggtaca
     2401 tcgacacgca cggcggcgcg ggtgtgtaca atctcgaagg cagcgaggca caaaaagtcg
     2461 gcgaataccg gcaaggcatc gccctacttc gacaagcaaa aaacctgcca accgagttaa
     2521 acggctttat cgcgcacata caaaaaatcc tgccctcgcc caaactttac tgcggttctc
     2581 cgtggctggc gcaatcgctg acccgtgtcg gcgacaaatt gcgcctgttt gagctgcacc
     2641 ccaccgactt tgtccatctg caaaacaata tgggcgaagc aggattgggc aaacgcggac
     2701 aagtgttgcg cgaagacggt tacaaagagc tgatttccct gctgccgccc ccgccgcgcc
     2761 gcgccaccgt cctcatcgac ccgccctatg aggaaaaaca ggactaccgg cgtgtaacgg
     2821 aaacgctgaa agccgcttta aaacggtttg agtccggctg ttatctcatt tggtatccct
     2881 gcctcagccg cgaagaaagc cgcaagctgc ccgaagaatt gaaaaaactc ctgcccgaca
     2941 actaccttca cgccgaactt cacgtccacg cgccgaaagc cgacggtttc ggtatgcacg
     3001 gcagcggaat gttcgtcatc aatccgccct atctgttggc ggaacaattg gcggcaaacc
     3061 tccccgccct gacgcggctg ctggcgcaag acgaaggcgc gcgctacctt ttggacagca
     3121 aaatccgctg accccgatgc cgtctgaaac ccttcagaca acatctcccg tcaaataaac
     3181 aaaaccggac gatataccgg cagtcggcac ttttaagaat aaatatcccc tcatccgcct
     3241 gccgcgttcc gacttgcccc atgccgtttt tttacactac aatcccctag actatcctgc
     3301 aaaacgcacc aaaggaatac gccacaataa cctgccgcct ttcagacggc acaaaccttt
     3361 ccgaaacgag caaactatgg acacactgac ccgattcctc cccgaacacc tgcaacaaaa
     3421 ccagctgccc gaagcactcg gcggcgtttt actgtccgtt gtttccgcct gcaccgaaat
     3481 caacgccaaa gtccgcctcg gcgcactggc cggcgtattg ggtatggcgg gcacgggcaa
     3541 tattcagggc gaagaccaaa aaaaactgga tgttatcgcc aacaacatca tgattgacac
     3601 actcaaagcc aaccctgccg ttgccggttt ggcaagcgag gaagaagact ctttcgtaag
     3661 tgccggtgaa aacggacgct atctcgtcct attcgaccct ttagacggat cgtccaatat
     3721 tgatgtcaac atttccgtcg gtacaatttt ctccatcctt gaaaaacccg aaggcgcatt
     3781 ggcaaccgaa tcattccttc aaacgggcag acagcagctt gccgctggtt acgttcttta
     3841 cgggcctcaa acccagctcg tattcacatt cggacacggc gtatatatgt tcacgctcaa
     3901 tgccgaaaac gaatttgtgc tgacaaaaga aaaaccgaaa gtacccgaaa gtaccaaaga
     3961 atttgccatc aatatgtcca accgccgcca ctggctgccc cccgtccaac aatacatcga
     4021 cgagctcttg gcgggcgaaa ccggcacgcg cggcaaaaac tacaatatgc gctgggtagc
     4081 cagcatggtt gccgaaatcc accgcatact gatgcgcggg ggcgtgttca tgtatccgca
     4141 agacaaacgc gacccgtcca aacccggcaa actgcgcctg atgtatgaag ccaatcctat
     4201 ggccctgata ctcgaacaag ccggcgcatc ggcaagcaac gcccgtcagg acatactcgg
     4261 catccgtccc gaaagcctgc accagcgcgt cgccgtcatt atgggcagca gcgaagaagt
     4321 ggattacctc aaccgcctgc attcaaaata aaaggcagcc tgaccgataa agaaaggcgg
     4381 cagcgcgcat ccgacgctgc cgccgatatt tcgtttatag ccttaaaaag atagaaaacc
     4441 acctttccga acggcaaaaa tgccgtctga aaagttttca gacggcattt taaaaattaa
     4501 agcccgaatt tatttgcccg ctgctttttg caggatggcg tacaactcgt ctttcagttt
     4561 caatttggct tttttcagct catcgatggt ttccgcaccg ctggtaaccg gattgttgac
     4621 cagaccggta attttatcgt ccagctcgtt gtgttcgtcg aacagacggg cgaagcggga
     4681 attttcctgt ttcaatttgg aaatcaaatc acggtattct gggaacatat cgctttcctc
     4741 tcttggttta cggttaaaaa gtcaaactga atctttacat taattataac aaagataata
     4801 tttttatcca gtgttttatc ggatacggca aaattttctt ttaacaccgc cgtccggttg
     4861 ataaaaacgt tgacaatatc acgctttacg cataaatttt cagcctttcc ta
//
LOCUS       DAWGKF010000145         4857 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.145, whole genome shotgun sequence.
ACCESSION   DAWGKF010000145 DAWGKF010000000
VERSION     DAWGKF010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4857)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4857)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4857
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.145"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(210..932)
                     /gene="rmpM"
                     /locus_tag="WHR07_001707"
     CDS             complement(210..932)
                     /gene="rmpM"
                     /locus_tag="WHR07_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding outer membrane protein
                     RmpM"
                     /protein_id="HEZ2130899.1"
                     /translation="MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNY
                     GECWKNAYFDKASQGRVECGDAVAAPEPEPEPEPAPVVVVEQAPQYVDETISLSAKTL
                     FGFDKDSLRAEAQDNLKVLAQRLGQTNIQSVRVEGHTDFMGSDKYNQALSERRAYVVA
                     NNLVSNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPDRR
                     VDVKIRSIVTRQVVPAHNHHQH"
     gene            1296..2246
                     /locus_tag="WHR07_001708"
     CDS             1296..2246
                     /locus_tag="WHR07_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CysB family HTH-type transcriptional regulator"
                     /protein_id="HEZ2130900.1"
                     /translation="MKLQQLKYALEVYQHNLNVSEAAEALFTSQPGISKQIKLLEEEI
                     GIQIFIRSGKRVVSVSQPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHT
                     QARYALPLIVADFVKRYPKVNLTIKQGSPAAIARMVTSGEADLAIVTERIDDHPELGK
                     LPCYDWTHAVIVPNDHPLLECRNPLRIEDLARFPLITYEFAFNAGSSIARAFSKARLE
                     QPDVALAAADTDVLKTYVRLGLGVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIAL
                     RSDTYLRGYAYDFIQAFAPHLTREKVDRILYTPISEDFSI"
     gene            complement(2359..3093)
                     /gene="fnr"
                     /locus_tag="WHR07_001709"
     CDS             complement(2359..3093)
                     /gene="fnr"
                     /locus_tag="WHR07_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate/nitrate reduction transcriptional
                     regulator Fnr"
                     /protein_id="HEZ2130901.1"
                     /translation="MASHNTTHQMKTLCSSCSLRELCLPVGLLPNELSQLDAVIRQSR
                     RLKKGEYLFCVGEAFTSLFAIRSGFFKTTVASQDGRDQVTGFFMSGELIGMDGICSHV
                     HSCDAVALEDSEVCELPFTHIEELGQNIPSLRTYFFRMMSREIVRDQGVMLLLGNMRA
                     EERIAAFLLNLSQRLYSRGFAANDFILRMSREEIGSYLGLKLETVSRTLSKFHQEGLI
                     SVEHKHIKILNLQVLKKMVSGCSHAI"
     gene            3298..4719
                     /gene="hemN"
                     /locus_tag="WHR07_001710"
     CDS             3298..4719
                     /gene="hemN"
                     /locus_tag="WHR07_001710"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HEZ2130902.1"
                     /translation="MKIIQIQNNHNVNDDRPEFDRALIASLPASGPRYTSYPTADRFH
                     DGFREGEYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIE
                     YLEKEMELLAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSI
                     EIDPRKVSRDTVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAG
                     FKSVSVDLIYGLPHQTSESIKTTIDTVLSLDPDRLALYHYAHLPHVFKPQRRIDTASV
                     PDSEEKLDMLQYCVQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYAD
                     CDLVAIGVSSIGKIGSTYSQNERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQD
                     LMCRFALDYRIYESMFGIPFDRYFKDELADLEKLVGLGLVRLNSHGLTVTPKGRFLIR
                     NIAMVFDYHLRHKETKAKYSQTV"
BASE COUNT         1241 a         1329 c         1173 g         1114 t
ORIGIN      
        1 gcggcaatgg gacacaaacc tgaatctgaa tccgaacctg caccccgatt ctgacgatag
       61 ccgtttcaga aaaccaccca aaaaaacaaa ccccgcaaaa gcgggggttt gtttcacatc
      121 atcgatgccg accgacgttt cacgaatatt gcaacagtac ctggtacaaa atccactaac
      181 ctcatgcatc ggcaagatat tgcctagcct tagtgttggt gatgattgtg tgccggcaca
      241 acctgacggg ttacgatgct gcggattttc acatccacac ggcggtcagg ttcgatacat
      301 gcaatcagag cctcacgttt tttggcttta gagactttcg cacccagttt ggcaacttcg
      361 gcttcacaaa cttgagtcat ttgcgcttga gattcgccca agccgacagc agaaattcta
      421 gaaacaggta cgccgttgct gaccaggttg tttgccacta cgtatgcgcg gcgttcggac
      481 agggcctgat tgtatttgtc agaacccata aagtcggtat ggccttcgac gcggacagat
      541 tggatattgg tttgacccag gcgttgcgcc aatactttca ggttgtcttg agcttcggcg
      601 cgcaatgaat ccttatcgaa accgaacagg gttttggcag acagggaaat ggtttcatca
      661 acatattgcg gagcctgctc cacaacgacg acaggagcgg gttcgggttc tggctcgggt
      721 tcgggggcag caaccgcatc gccgcattct acgcgacctt ggcttgcttt atcaaagtag
      781 gcgtttttcc agcattcgcc atagttgttg cgtacgattt cgttcgactg gccgcttacg
      841 gtgtaaccct gaacggacgc ctcgcccgca acagcagtgc cggaagcgag caatgcaacg
      901 aataatgcgc ttaatttcag ctgtttggtc attttattcc ctcattaaat ttgtacagca
      961 gatacagaag caactgctga attgccaaca tacaggccgc tgtagaaaca tggcggcaaa
     1021 tcggatattt cagtctccac tataaagaag cagggggagg actgtcaata ctcaacgcct
     1081 gaaaacaacc gtaaaacagc ctgtttcctg atagtctatc atgccgaaaa atcaattccg
     1141 tgtcattact ttagggggat tttttccata tcgcacgatt gccgttgcac aaaaacaaca
     1201 aacacaacgg caaagcccca taccgtaccg gcaagaaaat atgataaatt ataaacaatg
     1261 ttcagccacc cgacacagac ccacaccgac ccgccatgaa attacaacaa ttgaaatacg
     1321 ccttagaagt ttaccagcac aacctgaacg tttccgaagc ggccgaagcc ttgtttactt
     1381 cgcaacccgg catctccaaa caaatcaaat tgctggaaga agaaatcggc attcagattt
     1441 ttatccgcag cggcaagcgc gtggtttcgg tctcgcagcc gggcaaggtg gttttggata
     1501 ttgcggaacg tattttacgc gatgtacaga acattaaaaa tatcggcagc gagtttaccg
     1561 gacaggacag cggttcgctg acggttgcca cgacgcatac tcaggcacgc tatgccctac
     1621 ccttgattgt tgccgatttt gtgaaacgct atccgaaagt caacctgacc atcaaacagg
     1681 ggagccctgc cgccatcgca cgtatggtta cctcaggcga ggcggacttg gcgattgtta
     1741 cggaacggat agacgaccat cccgaactgg gaaaacttcc ctgctatgac tggactcatg
     1801 cggttatcgt accgaacgac caccccttgc tcgaatgcag aaaccccctc cgcattgaag
     1861 atttggcgag gtttccgctg attacttatg aatttgcatt caatgcgggc agcagcatcg
     1921 cgcgggcatt ttccaaagcc cgtttggaac agccggatgt cgcattggcg gcggcggata
     1981 cggacgtatt gaagacttat gtgcgcttgg gtttgggcgt gggactgatg gcgaaaatgg
     2041 cgtacaaccc ggatacggac ggcgatttgc agcttgtgga tgcggcacac ctgttcgagc
     2101 cgtcgccgac gtggattgct ttgcgcagcg atacttattt gcgcggatat gcctacgact
     2161 ttatccaagc gtttgcgccg cacctgacac gcgagaaggt ggataggatt ctgtacacgc
     2221 ccatcagcga ggatttttcg atttaggcgg ctgccggttt tcagacggca ctttgcggca
     2281 gatacaacaa acaggacaga tgttttcgtc tgccctgtgt ttattgagaa tgccgtctga
     2341 aatgttcgta cgggttaatc aaatggcgtg cgaacaaccg gataccatct tcttcaacac
     2401 ctgcagattg aggatcttga tgtgtttgtg ttcgacggaa atcaatcctt cctgatgaaa
     2461 tttagataat gtgcggctga cggtttcaag tttcagcccg agataactgc cgatttcttc
     2521 gcgggacatt cttaagatga agtcgttggc agcaaaacct cgggaataaa ggcgttggga
     2581 aaggttcaac agaaaggcgg caatccgctc ttcggcgcgc atattgccca acagcagcat
     2641 aacaccttgg tcgcgcacga tttcacgact catcatgcgg aaaaagtagg tacgcaggct
     2701 ggggatattc tgccccagtt cttcgatgtg ggtaaacggc agttcgcaca cttcgctgtc
     2761 ttccaaggcg accgcgtcgc aactgtgcac atgggaacag atgccgtcca tgccgatgag
     2821 ttcgcccgac ataaagaaac ccgttacctg atcgcggccg tcctgactgg cgacggttgt
     2881 tttgaagaag cccgaacgga tggcaaagag cgaggtaaag gcttcgccga cacagaacag
     2941 gtattcgccc tttttcaggc ggcggctttg acggatgacg gcatcgagtt ggctgagctc
     3001 gttgggcagc agcccgacag gcaggcagag ttcccgcaaa gaacaggaag aacacagcgt
     3061 tttcatctga tgtgtagtat tatgcgaagc cataccgtac ctttttgtgc gctttgcccc
     3121 atcatgatta tagtggatta aatttaaacc agtacggcgt tgcctcgcct tgtccttatt
     3181 taaatttaat ccactatatg tgcttattga cacatatcaa gacaggttta tcatactgtg
     3241 gcattctacc aaactatcca aaatttgact aacatcataa aaccgcacac acacaccatg
     3301 aaaatcattc agatacagaa caatcacaat gtaaacgatg accgccccga gtttgaccgc
     3361 gcgctgattg ccagcctgcc cgccagcggc ccgcgctaca cttcctaccc taccgccgac
     3421 cgtttccatg acggtttccg cgaaggcgaa tatatcaaag ctttacattt gcgcggtatg
     3481 ggcgcgttaa acaaaccgct ttccctttac attcacattc cgttctgcaa caccatctgc
     3541 tactactgcg gctgcaacaa aatcatcacc aaagacaaaa gccgcgccga tgcctacatc
     3601 gaatatcttg aaaaagaaat ggaactgctc gctccacatc tgaacggacg gcaccagctt
     3661 gcccaactgc acttcggcgg cggcacgccg acctttttga gcgacgaaca gatcgaacgt
     3721 gtcttccgca tgatacgcaa acatttcgag ttaatcccca ccggcgaata ctccatcgaa
     3781 atcgacccgc gcaaagtcag ccgcgacacc gtcctcatgc tcggcagact cggcttcaac
     3841 cgcatgagca tcggcattca ggatttcgac cccaaagtgc aggcagcggt caaccgcatc
     3901 caaagttacg aagaaaccaa agaagtcatc gatgcggcgc gcgaagcggg gttcaaatcc
     3961 gtcagcgtcg atttgattta cggcctgccg caccagactt cggaaagcat caaaaccacc
     4021 atcgataccg ttttgtcgct cgatcccgac cgcctcgccc tttatcacta cgcccacctg
     4081 ccgcacgtgt tcaaaccgca acgccgcatc gataccgcct ccgtccccga cagcgaagag
     4141 aagctcgata tgctgcaata ctgcgtccaa accctaaccg aacgcggcta cgtcttcatc
     4201 ggcatggatc atttcgccaa acctgacgac gaactctcca tcgccctcaa agaaggcttc
     4261 ctccagcgca acttccaagg ctattcgacc tacgcggatt gcgatttggt cgccatcggc
     4321 gtgtcgtcca tcggcaaaat cggcagcacc tattcccaaa acgaacgcga catcgatgcc
     4381 tactatgccg ccatcgacga aggcagactg cccatcatgc gcggttatca gctcaatcag
     4441 gacgacatcc tgcgccgcaa tatcattcag gatttgatgt gccgcttcgc gctcgactac
     4501 cggatttacg aaagtatgtt cggcatcccg ttcgaccgct acttcaaaga cgaactggcg
     4561 gatttggaaa aactcgtcgg tttgggattg gtgcgcctga acagccacgg gctgaccgtt
     4621 accccgaaag gacgcttcct catccgcaac atcgccatgg tgttcgacta ccacctgcgc
     4681 cacaaggaaa ccaaggcgaa atattcgcaa acggtgtgat tgcgtctaac gtacaaatgc
     4741 cgtctgaaag gctttttcag acggcatttt gctgccggca ggataagtgt tttcaagaac
     4801 aggcggcggc atatcataac gttccgcacc tttgtgtccg accgttccga aaccaag
//
LOCUS       DAWGKF010000146         4847 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.146, whole genome shotgun sequence.
ACCESSION   DAWGKF010000146 DAWGKF010000000
VERSION     DAWGKF010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4847)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4847)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4847
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.146"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(113..325)
                     /locus_tag="WHR07_001711"
     CDS             complement(113..325)
                     /locus_tag="WHR07_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ2130903.1"
                     /translation="MELGYTPYNLRTLRNRCKLTQAELAQIVGVKHYIQVGRWEAEPD
                     TETRRADMPLEKWRQFLDWIEKTNAV"
     gene            complement(337..618)
                     /locus_tag="WHR07_001712"
     CDS             complement(337..618)
                     /locus_tag="WHR07_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130904.1"
                     /translation="MNRAALFNRYPEWIIGQDGASRFITHCRYPRLIAKIHRQTDGEC
                     PGGHYRHSENGITLYDFIFFDGKPADEARFAAVLTETCRRAVKKICETK"
     gene            complement(655..918)
                     /locus_tag="WHR07_001713"
     CDS             complement(655..918)
                     /locus_tag="WHR07_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130905.1"
                     /translation="MADILPSDKRRQPPKTKGNPMNIIEQEMKHSSLRKVDAEIAKII
                     ADAHKINAESVKIAQESRWYPMIAATGLVTAIAAVLALIFKFA"
     gene            complement(1012..1563)
                     /locus_tag="WHR07_001714"
                     /pseudo
     CDS             complement(1012..1563)
                     /locus_tag="WHR07_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273911.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
     gene            1542..1853
                     /locus_tag="WHR07_001715"
     CDS             1542..1853
                     /locus_tag="WHR07_001715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130906.1"
                     /translation="MTSPVSPSIRAASIFPLARSISTACRTDINRLPLRLIASTKTAE
                     INLASSGLSSVLPASLRRLRVGLTLTASSLRYSVARLMPNSCACCLRYAERAPRSIAS
                     A"
     gene            complement(1875..2750)
                     /locus_tag="WHR07_001716"
     CDS             complement(1875..2750)
                     /locus_tag="WHR07_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3102 domain-containing protein"
                     /protein_id="HEZ2130907.1"
                     /translation="MNTEIEIIATDKVSNQAAMRSVLVMEQWGNGETYSEERWVERGR
                     QAVRQTMEGMFELGRALIILKEHTEHGRFMEIVKSQFGLGIAETSRLMSATRRFATPQ
                     MQKAAPKLMDLGKSKLLELLVEEDVTLVGLAEGEEVNGMTFDDVDRMTVRELRVALRE
                     SRENLAAKDEVMKTKTAKIDELAEKLAKKQTVVREPKAEDVGSELAMQLTSLEVGIRS
                     QVSRLKDLFDQLNAHSEAHGISHQAKMVGTLNQIILDCEQLRESYALPTEAPTDNVPE
                     WLGGETGEGDESGND"
     gene            complement(2795..3085)
                     /locus_tag="WHR07_001717"
     CDS             complement(2795..3085)
                     /locus_tag="WHR07_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HEZ2130908.1"
                     /translation="MAESKRVQRLLRVFIALDEHPIIGLSNKDLSVGLGLTPSQVSRD
                     IDDLVASGLVIKLENGNYAYGIKTLQIAERFRQQHERLQSKIAEIGKRVDVD"
     gene            complement(3097..3276)
                     /locus_tag="WHR07_001718"
     CDS             complement(3097..3276)
                     /locus_tag="WHR07_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001510316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HEZ2130909.1"
                     /translation="MYGYTVEKLKENFAQNGQTLAQWARENGFKPRDVYLVVGGQRKG
                     NYGKGHEIAKKLGLK"
     gene            3390..3767
                     /locus_tag="WHR07_001719"
     CDS             3390..3767
                     /locus_tag="WHR07_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ2130910.1"
                     /translation="MISKSLFGNRLKEKRKFLGLTQAQAAEKAGIERETWGKYERGVF
                     MPSGDVLLSFLNMGIDVSSLFAAEQGIRPSENSEISKEESELLGYYRQASDNGKFVIL
                     SVAKGAEKKAAENTQVSATHKTA"
     gene            3796..4041
                     /locus_tag="WHR07_001720"
     CDS             3796..4041
                     /locus_tag="WHR07_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130911.1"
                     /translation="MFDFEQQIKWGERAEEIVKEAATQNNIEIPEPLASALAKAVKVH
                     YLSQAGVFSLVEAYADTVNPTEKEVDYQAIGKELFEK"
     gene            4275..>4847
                     /locus_tag="WHR07_001721"
     CDS             4275..>4847
                     /locus_tag="WHR07_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130912.1"
                     /translation="MAKKTTKTIHYLRAQQNHSLFDLEVALRRVLSAAPTVQDTQIEQ
                     YNQLTQIMHRTLDPKDVKGNSIGGLLIHIGSGTKDEHIRTMSNRPVQQDDHGGTQAPP
                     SGYSFLRKEAFLYIVGHHVIFCGHGFLSASTVASYLSLLSNKLRENNPDIVQFNIEFK
                     AVGNCDKLSLIQQHGVKSILLDASAYQLSRN"
BASE COUNT         1072 a         1148 c         1256 g         1371 t
ORIGIN      
        1 tgagtttatt ttggggcggc ggcgggtcgg gggcaagcgg cgtggggctt ttaggtttgg
       61 gggtgggtaa aaaatgccgt acccggcggg caggcttcgc actctgaagg tttcagacgg
      121 cgtttgtttt ttctatccaa tcgaggaact gccgccattt ttccagcggc atatcggccc
      181 gacgggtttc ggtatcgggt tcggcttccc agcggcctac ctgtatgtag tgcttcaccc
      241 cgacgatttg cgccaactcg gcctgtgtca gtttgcagcg gttgcgaagg gtgcgaaggt
      301 tgtaaggcgt gtagccgagt tccatgtcgt tgcggtttat tttgtttcgc atattttttt
      361 gactgccctg cggcaggttt cggtaaggac ggcggcaaat cgggcttcgt ctgccggttt
      421 gccgtcgaaa aaaataaaat cgtaaagggt gatgccgttt tcggaatggc ggtaatgccc
      481 gcccgggcat tcgccgtctg tctgcctgtg gattttggca atcaggcggg gatagcggca
      541 atgggtaatg aaacggcttg cgccgtcttg cccgataatc cattcggggt agcggttgaa
      601 tagtgcggct ctgttcattt tgttgaggga taaagcccct cgcggggctt gtggtcaggc
      661 aaatttgaat atcagtgcca acacggcggc gatggcggta accagcccgg tggccgctat
      721 catgggatac cagcgggact cttgggctat ttttacggat tcggcgttga ttttgtgcgc
      781 gtctgcaatg attttggcga tttcggcatc tacttttctc agactggagt gtttcatttc
      841 ttgttcgatt atgttcattg gatttccttt cgtttttggc ggttgccgcc gcttgtcgga
      901 tggcaggatg tctgccatgt gtgtacatta atacctttta ggttttattg caagtgtttt
      961 gggcaggatg ccgtctgaat ttttttcagg cggttttttg ttttgcgggg ttttggcggc
     1021 ggcttcgtat gcttggcggt ggcggcggct gtaccattcg gcgagttcgc gccgctcttg
     1081 gaggcggtag ctgtcggcgg tcaggtagtg gtgcaggctt gagaagccgg cgcgttggag
     1141 ggcggcgcgg ctgatgtggc cgagggcgag gtctgttgtg agggtgtctt ttccggcggt
     1201 caggctgatg ttggtgaaga ggtggcggaa tccgtgcatt gtgtgtttgg atttgccggg
     1261 ggtgctgccg tcatagccca gtcgtcggat ggcgttgtgg gcgaatttga tgctgatgtg
     1321 gtcgggatgg ggggcgggtt tgcgccgtgg gcggatgcct gggaaaaggt ggatgttgtc
     1381 gccggtctgt gtgtgcagct ctcggagtat ttctaccgcc cagtccgaca gtgggacggt
     1441 aaaggggtgt ttggtcttca tgtcggcggc ggggatgtgc cataaccggg cggtgaggtc
     1501 gatgtcttgc cagcgggcgg aaagcagtgc ggacggacgg gatgacttcc ccggtttccc
     1561 catcaatccg cgccgcctcg atttttccgt tggcgcgcag catttccacc gcctgccgca
     1621 ccgacattaa ccgcttgccg ttgcgcctca tcgcctccac caaaaccgcc gaaatcaatt
     1681 tggcttcttc cggtttaagc tccgtcttgc ccgcatcgct gcgccgtttg cgcgtcggct
     1741 tgacgctgac cgcctccagc ttgcggtata gcgtggcaag gctgatgccc aattcctgcg
     1801 cctgctgctt aagatatgca gagcgtgcgc cgcgttccat tgcttccgcc tgattctcga
     1861 ctgccttaag acgctcaatc attgccggat tcatcgcctt ctcccgtttc accgcccaac
     1921 cattccggca cattgtctgt cggtgcttca gtcggcaggg catagctttc gcgcagttgc
     1981 tcgcagtcca aaataatttg attgagcgtg ccgaccatct ttgcctgatg gctgatcccg
     2041 tgtgcctcac tgtgcgcatt aagttggtcg aacaaatctt tcagacggct cacttgactg
     2101 cggataccga cctcaaggct tgttaactgc atcgccaact cgctgcctac gtcttccgcc
     2161 ttcggctctc tgacaacggt ttgcttctta gccagcttct cggccagctc atcaattttg
     2221 gctgttttgg ttttcatcac ttcgtctttg gcggcgaggt tttcgcggct ttcgcgcagg
     2281 gcgacgcgca gctcgcgcac cgtcattcgg tccacatcgt caaaggtcat gccgttgact
     2341 tcttcccctt cggccaaacc caccagcgta acgtcttctt cgaccagcag ctcaagcagc
     2401 ttcgacttgc ccaaatccat cagcttcggc gcggctttct gcatttgcgg ggtcgcaaag
     2461 cggcgagtgg ctgacatcag acgtgatgtt tctgcgatac ccagcccaaa ttggcttttc
     2521 acaatttcca taaaccgtcc gtgttccgta tgctctttta aaataatcag cgcacgtccc
     2581 agttcgaaca tgccttccat cgtctgccgt actgcttgac gaccgcgttc aacccaacgc
     2641 tcttcgctat aagtctcgcc gttaccccac tgctccatca ccagcacact gcgcatcgct
     2701 gcctgattgc ttactttgtc ggttgcgata atttcaattt ctgtattcat tttttatctc
     2761 caaagtttcc gacgtcggaa actttcaaaa tccgttaatc cacatcgacc cgcttgccga
     2821 tttcggcaat cttgctttgc agccgttcat gctgctgcct gaaccgctct gcgatttgca
     2881 gggttttgat gccgtaggcg tagttgccgt tttcaagttt gatgaccaat cccgaggcaa
     2941 ccaaatcatc aatatccctg ctgacttgcg atggcgtcag ccccagtccg accgataaat
     3001 ccttattgct cagaccgata atcggatgct cgtcaagcgc gataaagacc ctcaatagcc
     3061 gttgtaccct tttactttct gccatccgca tcctccttat ttcagtccca gcttcttggc
     3121 aatttcatgc cccttgccgt aattgccttt gcgctgtccg ccgaccacca gatacacatc
     3181 gcgcggctta aagccgttct ctcttgccca ctgcgccagc gtttggccgt tttgggcaaa
     3241 attttctttt agtttttcaa cagtatagcc atagatagcc ctttcccatt gtgataaaat
     3301 agtgaactat ttatgcacta gaaattaatt agtgcattac caatgcgtga attatgagat
     3361 tttaaaatct cttttgcaag gattattttg tgatttctaa atctcttttt ggtaatcgtt
     3421 tgaaagaaaa aagaaagttt ttagggctta cccaagcaca agctgctgaa aaagcaggta
     3481 ttgagcgcga aacatggggc aaatacgaac gtggcgtatt tatgcctagt ggagatgtat
     3541 tgctctcttt tttgaatatg ggaatagatg tgagcagctt atttgctgct gaacagggaa
     3601 ttaggccgtc tgaaaattct gaaattagta aggaagagtc agagttatta gggtattacc
     3661 gccaagccag cgataacggc aaatttgtca ttctcagtgt ggcaaaaggc gcagagaaaa
     3721 aagcagccga aaatactcaa gtttcagcca cgcataaaac agcgtgattt ttaaatccaa
     3781 aatggagaca gtcttatgtt tgactttgaa caacaaatca aatggggtga gcgagcggaa
     3841 gaaatcgtta aagaggcagc cacccagaac aatatcgaaa ttcccgaacc tttggcttcg
     3901 gcattagcta aggcggtaaa agtgcattat ctaagccaag ctggtgtgtt ttctttggta
     3961 gaagcctatg cagacacggt aaatccaact gaaaaagaag tagattacca agcaatcggc
     4021 aaagagctat ttgaaaaata aaaaatgccg tctgaaattt tcagacggca tttaggacac
     4081 tccgacagtc gggctgctcc ggtgttctga aacggatatt aagcaattga agcggccgtg
     4141 cattttaaaa cgcattaaaa actaccccga catacaggtc atcgggcagg tggttcaggt
     4201 gttgaaagat ttgaattgat gccgtctgaa tttatttttt cgacacagat attaaaagag
     4261 aaaggactgt acaaatggca aaaaaaacta ctaaaactat tcattattta cgtgcgcagc
     4321 aaaaccatag cttgttcgat ttagaggtag cattaagaag ggttttgtca gctgctccta
     4381 ctgttcaaga tacacaaatt gaacaataca atcagcttac ccaaatcatg catagaactt
     4441 tggatcctaa agatgtaaaa ggcaattcaa ttggtggatt actgatacac attggcagcg
     4501 gtacaaaaga tgaacatatc cgcactatga gcaatagacc tgtacagcaa gatgatcatg
     4561 gtggaacaca agctcctcca agtggatatt cctttttgcg taaagaggct tttttgtata
     4621 ttgttggaca ccatgtaatt ttttgcggac atggtttttt gtcagcatca acggttgctt
     4681 cttatttaag tttacttagc aataaattga gagagaacaa tccggatatt gttcaattta
     4741 atattgaatt caaagcagta ggcaattgcg acaagttgtc attgatacaa caacatgggg
     4801 taaaaagtat tcttttagat gcttcggcat atcaattatc cagaaac
//
LOCUS       DAWGKF010000147         4835 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.147, whole genome shotgun sequence.
ACCESSION   DAWGKF010000147 DAWGKF010000000
VERSION     DAWGKF010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4835)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4835)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4835
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.147"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            245..982
                     /locus_tag="WHR07_001722"
     CDS             245..982
                     /locus_tag="WHR07_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HEZ2130913.1"
                     /translation="MIILDKVSKHYQTRDKTRFAAVEPTSLEIRDGEIFGLMGYSGAG
                     KSTLLRLINLLERPDSGTVGVCGQDLTKLNAAALRQARQNIGMVFQQFNLLNNRTVAG
                     NVAFPLEIAGWPSEKIKTRVAECLEIVGLTERAGHYPAQLSGGQKQRVGIARALAPKP
                     QVILADEPTSALDPATTRSVLECLEDINKRFNVTIVIVTHEMSVIRRLCDRAALLDKG
                     KVVEIVEVRGNQIHAQSEIGRELIRED"
     gene            984..1670
                     /locus_tag="WHR07_001723"
     CDS             984..1670
                     /locus_tag="WHR07_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ2130914.1"
                     /translation="MADLTFEQAVSTIVGMKDEIVRALGETFVMVGLSTTIAVIFGTL
                     LGVLLFATSSRQLHYNKPVNFLLDNLVNLMRAFPFVILMIAMIPATRAIVGSTIGPIA
                     ASLVLSVSGLFYFARLVEQNLREVPKGVIEAAAAMGAPPVAIVRKVLLNEARAGMVSS
                     ITVLAIGLLSYSAAAGMIGGGGLGDLAIRYGYYRYQTEVIVFIVALLVLLVILIQSTG
                     NALARKLDKR"
     gene            1829..2692
                     /locus_tag="WHR07_001724"
     CDS             1829..2692
                     /locus_tag="WHR07_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130915.1"
                     /translation="MKTFFKTLSAAALALILAACGGQKDSAPAASASAAADNGAEKKE
                     IVFGTTVGDFGDMVKEQIQPELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHKP
                     YLDDFKKEHNLDITEVFQVPTAPLGLYPGKLKSLEEVKDGSTVSAPNDPSNFARALVM
                     LDELGWIKLKDGINPLTASKADIAENLKNIKIVELEAAQLPRSRADVDFAVVNGNYAI
                     SSGMKLTEALFQEPSFAYVNWSAVKTADKDSQWLKDVTEAYNSDAFKAYAHKRFEGYK
                     SPAAWNEGAAK"
     gene            complement(2755..3324)
                     /locus_tag="WHR07_001725"
     CDS             complement(2755..3324)
                     /locus_tag="WHR07_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HEZ2130916.1"
                     /translation="MVRRLIIGISGASGFQYGVKALELLRAQDIETHLVVSKGAEMAR
                     ASETAYARDEVYALADFVHPIGNIGACIASGTFKTDGMLVAPCSMRTLASVAHGFGDN
                     LLTRAADVVLKERRRLVLMVRETPLNLAHLDNMKRVTEMGGVVFPPVPAMYRKPQTAD
                     DIVAHSVAHALSLFGIDTPDSTEWQGMAD"
     gene            3482..4342
                     /locus_tag="WHR07_001726"
     CDS             3482..4342
                     /locus_tag="WHR07_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEZ2130917.1"
                     /translation="MAKVKGGLGRGLDSLLANGADNSSGDRLTTVAVKDIRPGRYQAR
                     VQIDDEALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPAVI
                     KTISDETALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISN
                     SLRLLSLPEPVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERRSQ
                     AALQNKRPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGKIILHFDTPETFDHI
                     LKQLGIDYRP"
     gene            4478..4816
                     /locus_tag="WHR07_001727"
     CDS             4478..4816
                     /locus_tag="WHR07_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130918.1"
                     /translation="MNTRIIVSAAFVALALAGCGSINNVTVSDQKLQERAAFALGVSP
                     NAVKISNRSNEGIRINFTATVGKRVSQCYVTSVISTIGVTTSDAICLGGGTHKGKSQC
                     NALLKAAGRC"
BASE COUNT         1201 a         1460 c         1185 g          989 t
ORIGIN      
        1 tttcaattat ttgccgtttt ggtgcgaacc gctgcctttg cccgtttcag acggcattgt
       61 ccgaaatggt tgcccgcttc ctgctttatt gacaaaaaaa cgctttcccg ataatatcct
      121 acgaaaatta acctgccgat ttgacacagc ttgcgggcat aacagctaaa gcgttccgac
      181 aatttcagct ttatcttccg cgcccgttgt gtcctgcatc gggctttgtt ttatgggaag
      241 gacaatgatt attttggaca aggtttccaa gcattaccaa acgcgcgaca agacccgttt
      301 tgccgccgtc gagccgacca gcctcgaaat ccgcgacggc gaaatcttcg ggctgatggg
      361 ctattccggc gcgggcaaat ccaccctgtt gcgcctgatc aacctgttgg aacgccccga
      421 cagcggcacg gtcggcgtgt gcggacaaga tttaaccaag ctgaatgccg ccgcattgcg
      481 tcaggcgcgg cagaatatcg gcatggtgtt tcagcagttc aacctgttga acaaccgcac
      541 cgtcgccggc aacgtcgcct tcccattgga aatcgccgga tggccgtctg aaaaaatcaa
      601 aacgcgcgtt gccgaatgcc tcgaaatcgt cggactgacc gaacgcgccg gccactatcc
      661 cgcccagctt tcaggcgggc agaaacagcg cgtcggcatc gcccgcgcgc tcgcgcccaa
      721 accccaagtc atcctcgccg acgaacccac ttccgccctc gaccccgcca ccacgcgcag
      781 cgtcttggaa tgtttggaag acatcaacaa acgcttcaac gttaccatcg tcatcgtaac
      841 ccacgaaatg agcgtcatcc gccgcctgtg cgaccgcgcc gccctcttgg ataaaggaaa
      901 agtggtggaa atcgtcgaag tacgcggcaa ccaaatccac gcccaatccg aaatcgggcg
      961 agaactgatt cgggaggatt gatatggcag acttaacatt cgaacaagcc gtttccacca
     1021 tcgtcggcat gaaagacgaa atcgtccgcg ccttgggcga aaccttcgtc atggtcgggc
     1081 tgtccaccac gatcgccgtc atcttcggca cgctcttggg cgtattgctt ttcgcgactt
     1141 ccagccgcca gttgcattac aacaagccgg tgaatttcct gctcgacaac ttagtcaacc
     1201 tgatgcgcgc ctttcccttc gtcatcctga tgattgccat gatacccgcc acccgcgcca
     1261 tcgtcggcag caccatcggc ccgattgccg cctcgctggt attgagcgtg tcgggattgt
     1321 tttattttgc ccgactggtg gaacaaaacc tgcgcgaagt cccaaaaggc gtaattgaag
     1381 ccgccgccgc gatgggtgcg cctccggttg ccatcgtccg caaagtcctc ttaaacgaag
     1441 cgcgcgcggg catggtttcc agcattaccg tgcttgccat cgggcttttg tcatacagcg
     1501 cggcggcagg gatgataggc ggcggcggct tgggcgacct cgccatccgc tacggctact
     1561 accgctacca aaccgaagtc atcgtcttca tcgtcgccct cctcgtgctg ctggtcatcc
     1621 tgattcaaag caccggcaac gcgttggcgc ggaaactcga caaacgttaa acccgaatgc
     1681 cgtctgaacg ccaaaacccc caccgctatc cgaaaaatgc tataaaatcc ccctgttcgc
     1741 ggcaaatgcc gtctgaacgc cgaatctgga cggcaggact ccctgcccgt catttttgtt
     1801 tgaaactgcc acaacatcag gagaaaatat gaaaaccttc ttcaaaaccc tttccgccgc
     1861 cgcactcgcg ctcatcctcg ccgcctgcgg cggtcaaaaa gacagcgcgc ccgccgcatc
     1921 cgcttctgcc gccgccgaca acggcgcgga gaaaaaagaa atcgtcttcg gcacgaccgt
     1981 cggcgacttc ggcgatatgg tcaaagaaca aatccaaccc gagctggaga aaaaaggcta
     2041 caccgtcaaa ctggtcgagt ttaccgacta tgtgcgcccg aatctggcat tggctgaggg
     2101 cgagttggac atcaacgtct tccaacacaa accctatctt gacgacttca aaaaagaaca
     2161 caatctggac atcaccgaag tcttccaagt gccgaccgcg cctttgggac tgtacccggg
     2221 caagctgaaa tcgctggaag aagtcaaaga cggcagcacc gtatccgcgc ccaacgaccc
     2281 gtccaacttc gcacgcgcct tagtgatgct cgacgaactg ggttggatca aactcaaaga
     2341 cggcatcaat ccgctgaccg catccaaagc ggacattgcc gaaaacctga aaaacatcaa
     2401 aatcgtcgag cttgaagccg cgcaactgcc gcgcagccgt gccgacgtgg attttgccgt
     2461 cgtcaacggc aactacgcca taagcagcgg catgaagctg accgaagccc tgttccaaga
     2521 accgagcttt gcctatgtca actggtctgc cgtcaaaacc gccgacaaag acagccaatg
     2581 gcttaaagac gtaaccgagg cctataactc cgacgcgttc aaagcctacg cgcacaaacg
     2641 cttcgagggc tacaaatccc ctgccgcatg gaatgaaggc gcagccaaat aaggcagtcg
     2701 tataaaatga tgccgtctga accgcattcc gtgttcagac ggcatttttg tcctttaatc
     2761 cgccattccc tgccattccg tcgaatccgg tgtatcgatt ccgaacagcg acaaagcgtg
     2821 tgcaacactg tgcgccacta tgtcgtccgc cgtctgcggt ttgcggtaca tcgcaggaac
     2881 agggggaaac accacgccgc ccatttccgt tacccgcttc atattgtcca aatgggcaag
     2941 gttcagcggc gtttcgcgca ccatcagcac cagccgccgc ctttccttca aaaccacatc
     3001 cgccgcacgc gtcaagaggt tgtcgccgaa gccgtgcgcg accgaggcaa gtgtccgcat
     3061 cgaacagggg gcgaccagca tcccgtccgt tttaaacgta ccgctggcaa tgcacgcccc
     3121 gatattgccg atcggatgca cgaagtccgc caaggcatat acctcatctc tcgcataagc
     3181 cgtttccgaa gcgcgcgcca tctccgcacc tttcgatacc acaaggtgcg tttcgatatc
     3241 ttgcgcgcgt aaaagttcca aagccttcac gccgtattgg aaaccgctcg ccccactgat
     3301 gccgattatc aaacgccgta ccatcatccg cctttcccat aaaaccgcct gcaacggcaa
     3361 accggctatt atagtgaaaa aacagaaatc cgataaatac ggatacaaat tgtcggcaac
     3421 acccaatatc cgataaaata tccgatttaa catcctatct gaataggcac gggagggcgg
     3481 tatggcaaaa gtaaaaggcg gattggggcg cggtttggat tcgctgctcg ccaacggcgc
     3541 agacaacagc agcggcgacc gattgaccac ggttgcggtt aaagatatcc ggcccggccg
     3601 ctatcaggcg cgtgttcaaa tcgatgacga agccttgcag gagctggcgg attcgattaa
     3661 ggcgcaaggc gtgatacagc ccgtcatcgt gcgcgaacac ggactgtccc gatatgaact
     3721 gattgcgggg gagcggcgtt ggcgtgccgc acagattgcc ggcctgaccg aaatccctgc
     3781 cgttatcaaa accatcagcg acgaaaccgc attggcaatg ggtttgatcg aaaacctcca
     3841 gcgcgaaaac ctcaacccca tcgaagaagc acaaggcttg aaacgccttg ccgacgagtt
     3901 cggactgacc cacgaaacca tcgcccaagc cgtcggtaaa agccgaagcg cgatttccaa
     3961 cagcctgcgc cttttaagcc tgcccgaacc cgtgcaggaa atgctttacc aacgccgcct
     4021 cgaaatgggg cacgcccgcg cactgctgac cctgcccgtc gtcgaacagc tcgaattggc
     4081 gcaaaaggcc gtcaaaaacg gctggtcggt gcgcgaagtc gaacgccgca gccaagccgc
     4141 ccttcaaaac aaacgtcccg agcccaaaaa gactgccgcc gccgacatcg gccgcctgaa
     4201 tgatttgctg actgaaaaac tgggtgtcaa cgccgaaatc aaaaccgcca accataaaaa
     4261 aggcaaaatc atcctgcatt tcgacacgcc cgaaaccttc gaccatatct tgaagcaatt
     4321 gggcatagat taccgacctt aattttgcgg gatataccgt ctgaaatata gagaatagct
     4381 ttccagattt taagtgggaa atataattct attgacattt tttctgcttc acgtaagaat
     4441 cgttttcctg ttttcatttt taattttcga ggaaattatg aacacacgca tcatcgtttc
     4501 ggctgcgttc gttgcgttgg cattagcagg ttgcggctca atcaataatg taaccgtttc
     4561 cgaccagaaa cttcaggaac gtgccgcgtt tgccttgggc gtcagtccaa atgccgtaaa
     4621 aatcagcaac cgcagcaatg aaggcatacg catcaacttt accgcaactg tgggtaagcg
     4681 cgtgagccaa tgctatgtta ccagtgtaat cagcacaatc ggcgttacca cttccgatgc
     4741 aatttgtttg ggaggcggaa cgcacaaagg caaaagtcaa tgcaatgctt tgcttaaagc
     4801 ggcaggccgt tgctaatcct ttattcggaa aaggt
//
LOCUS       DAWGKF010000148         4611 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.148, whole genome shotgun sequence.
ACCESSION   DAWGKF010000148 DAWGKF010000000
VERSION     DAWGKF010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4611)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4611)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4611
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.148"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(67..291)
                     /locus_tag="WHR07_001728"
     CDS             complement(67..291)
                     /locus_tag="WHR07_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein SlyX"
                     /protein_id="HEZ2130919.1"
                     /translation="MDAVQELEHRITELEIQSALQEDVIAGLNAMVAELRQTLDLQQA
                     QLRLLYQKMQDRNPDAQEPYSLRDEIPPHY"
     gene            complement(292..1680)
                     /locus_tag="WHR07_001729"
     CDS             complement(292..1680)
                     /locus_tag="WHR07_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HEZ2130920.1"
                     /translation="MNAVVVAVIVMLVLSLSRVHVVLSLTVGAFVGGAVAGMPLQNIA
                     DAAGQVSQAGIIPVFNKGLEGGAKIALSYAMLGAFAMAITHSGLPQQLAGAVVRKLNR
                     GGMPDSVRSGEGAVKWLLLSIILVMGMMSQNIIPIHIAFIPMIVPPLLLVFNRLKIDR
                     RLIACVITFGLVTTYMFLPYGFGAIFLNEILLGNIHSAAPQLDVKNINVMAAMAIPAL
                     GMLAGLLLAFVHYRKPRLYQSNNADTAGNADAANRPQPSAYRSLAAAAAIAVCFAIQL
                     MYEDSLVLGAMLGFAVFMMLGVINRDKANDVFGEGIKMMAMVGFIMIAAQGFAAVMNA
                     TGHIQPLVESSMAIFGNSKGMAALAMLVVGLLVTMGIGSSFSTLPIIAAIYVPLCVGL
                     GFSPLATVAIVGTAGALGDAGSPASDSTLGPTMGLNADGQHDHIRDSVIPTFIHYNIP
                     LLIAGWIAAMVL"
     gene            complement(1766..2587)
                     /gene="prmC"
                     /locus_tag="WHR07_001730"
     CDS             complement(1766..2587)
                     /gene="prmC"
                     /locus_tag="WHR07_001730"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEZ2130921.1"
                     /translation="MTFDEWLGLSKLPKNEARMLLQYASEYTRVQLLTRGGEEMPDEV
                     RQRADRLAQRRLNGEPVAYLLGWREFYGRRFAVNPNVLIPRPETEHLVEAVLARLPEN
                     GRVWDLGTGSGAVAVTVALERPDAFVRASDISPPSLETARKNAADLGARVEFAHGSWF
                     DTDMPSEGKWDIIVSNPPYIENGDKHLSQGDLRFEPQIALTDFSDGLSCIRTLAQGAP
                     DRLAEGGFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTLGKYMKHLK"
     gene            complement(2594..3037)
                     /locus_tag="WHR07_001731"
                     /pseudo
     CDS             complement(2594..3037)
                     /locus_tag="WHR07_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238425.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(3102..4586)
                     /gene="tldD"
                     /locus_tag="WHR07_001732"
     CDS             complement(3102..4586)
                     /gene="tldD"
                     /locus_tag="WHR07_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HEZ2130922.1"
                     /translation="MPYNQAPDFLCADTMHPTYSAVQARLLEANRLSPELLAKSLCII
                     GAHHVDYADIYCQRTAYESWHLEEGIVKSGSFQINQGVGVRAVSGDKTAFAYADSLCI
                     DSINRSARAVRAIGAAGGKVSAKMPSETRGKPVCSASDPIAGLDSAAKVALLNKVEAI
                     AKAADPRIVQVMAGLTCEYDMVYLARLDGKHAADIRPMVRLNVTVIAKQGERREQGSA
                     GGGGRYDLAYFDENLVRQFVDAAVKQALTNLESRPAPAGEMTVVLGNGWPGVLLHEAV
                     GHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGDIAGRRGSLNIDDEGNETRRTVL
                     IEDGILVGYMQDETNARLTGTQSTGNGRRESYASVPMPRMTNTFMENGSYEPEEIIAS
                     IDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGRLQYPVKGATIIGNGPEVLKHVS
                     MIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGSAI"
BASE COUNT         1029 a         1408 c         1236 g          938 t
ORIGIN      
        1 ttaggtttgc atcggcggaa tattcaaaca cagccttttt taaggaaatc cggatacggc
       61 ggcgcatcaa taatgcggcg gaatctcgtc gcgcagggaa tacggctctt gcgcgtcggg
      121 attcctgtcc tgcatttttt gatacagcag cctcaactga gcctgctgca aatccagcgt
      181 ctgccgcaat tccgccacca tcgcgttcag gccggcgatt acgtcctcct gaagcgcgga
      241 ttggatttcc agctctgtga tgcggtgttc caactcttga accgcgtcca tttacagcac
      301 catcgcggca atccagccgg caatcagcag cgggatattg tagtggatga aggtcgggat
      361 aacggaatcg cggatgtggt cgtgttgtcc gtcggcgttc agccccatcg tcgggcccaa
      421 cgtggaatcg gacgcaggcg aaccggcatc gcccaacgcc cccgccgtgc cgacgatggc
      481 gacggtggca agcggcgaaa aacccaaacc gacacacaaa ggcacataaa tcgcggcaat
      541 aatcggcaaa gtggaaaagg acgaaccgat gcccatcgtt accaaaagcc ccaccaccag
      601 catcgccaat gccgccatac ctttgctgtt gccgaatatc gccatactgc tttccaccag
      661 cggctgaata tgcccggtcg cattcatcac ggcggcaaaa ccctgcgcgg caatcataat
      721 gaagccaacc atcgccatca tcttgatgcc ttcgccgaat acgtcgtttg ccttgtcgcg
      781 gttgatgacg cccaacatca taaatacggc gaaaccgagc atcgcgccca acaccagcga
      841 gtcttcatac atcaactgga tggcaaagca tacggcaatg gcggcggcgg cggccaggct
      901 gcggtaggcg gacggctgcg gacggtttgc cgcatcggcg ttgcccgccg tatcggcatt
      961 gttgctttgg tacaggcgcg gtttgcggta atggacaaac gccagcagga gtccggccag
     1021 cattcccaac gcgggaatcg ccattgccgc cattacgttg atgtttttca catcaagctg
     1081 cggcgcggcg gaatggatgt tgcccaacag gatttcgttc aaaaaaatcg cgccgaagcc
     1141 gtaaggcagg aacatatagg tcgtaaccag cccgaaagta atgacgcacg caatcaggcg
     1201 gcggtcgatt ttcaggcggt tgaacaccaa aagcagaggc ggaacaatca tcgggataaa
     1261 ggcaatgtgg atggggatga tgttctgact catcatgccc atcacaagga tgatggaaag
     1321 cagcagccat ttgaccgcgc cctcgcccga acgcacgctg tcgggcatac cgccccggtt
     1381 cagcttgcgg acgaccgcgc cggcaagctg ctgcggcagg ccggaatggg taatcgccat
     1441 tgcaaacgcg ccgagcatcg cataagaaag cgcaatcttc gcaccgcctt ccaaaccttt
     1501 gttgaacacg gggataatcc ccgcctggct gacctgtccc gccgcatcgg caatgttttg
     1561 cagcggcata cccgccaccg cgccgccgac aaacgcgccg accgtcaggc tcaataccac
     1621 gtgcacgcgc gacagcgaca gcaccagcat aacgattacg gcaactacga ctgcattcat
     1681 tgtttatcgc tccaaaccta taaatgttta catatcgaaa cacatcataa cccaataacg
     1741 gaaaacccgc caattttgca aacaattatt tcaaatgctt catatacttc cccagcgtaa
     1801 ccctgtccaa acccgccaag tccggcaggg tttccactcc cgaaaaacca ttctccgcca
     1861 acacgccgcg caccgccgcg ccctgatcga aaccgtgttc cagcaataaa aaaccgcctt
     1921 ccgccaaacg gtcgggcgcg ccttgcgcca aggtgcggat gcagcttagg ccgtctgaaa
     1981 agtcggtcag cgcgatttgc ggctcaaacc gcaaatcgcc ttgcgacaaa tgtttatcac
     2041 cgttttcgat atagggcggg ttggacacga tgatgtccca tttcccttca gacggcatat
     2101 cggtgtcgaa ccacgaaccg tgtgcaaatt cgacccgcgc gcccaaatcc gccgcatttt
     2161 tccgcgccgt ttcaagggag ggcgggctga tgtcggatgc gcgcacaaac gcatcggggc
     2221 gttcgagcgc gacggttacg gcaaccgcgc cgctgcccgt ccccaaatcc cacacgcgcc
     2281 cgttttccgg caggcgcgcc aatacggctt cgaccaaatg ttcggtttcg gggcgcggaa
     2341 tcagcacatt cgggttgacg gcgaaacgcc gtccgtaaaa ctcgcgccag cccaacagat
     2401 aggcaaccgg ctcgccgttc agacggcgtt gcgccagcct gtccgcccgc tgtcggactt
     2461 cgtccggcat ttcttccccg ccccgcgtca acaactgcac gcgcgtatat tccgaagcat
     2521 attgcagcag cattcttgct tcatttttgg gcagttttga caagcccaac cattcgtcaa
     2581 acgtcatttt tatcccgtct gccgctgatg cggcttttct ttccttattc tttccggcaa
     2641 acgtaccgat ggtggcaacc gcaaatgcgg cataccacaa ataaaatcct gcaccgtagc
     2701 gcacaatatc cgatgtattc cctgcttcat cgacgtatac ggctttcaca ctgaaagcca
     2761 ccaacgccaa gccccaaagt gccgcatgga caggcacgac cttcttccgc aacgccagca
     2821 aaacaatggc cgccaaccaa acataattcg catagaccgc acaatacctg atatccaaag
     2881 aagcaaatat cgaccccaaa atcaaaacgg tcaaaccctc catgcttcca tgattgccca
     2941 aataaaatgc aacattggat aaagacgcta tccacagggc aaccgacacc agcaacatca
     3001 ctatgggaaa acttgatttc cgattctgtt cctgcatggt tttatcctaa tgtaaaaggc
     3061 cgcctgaaaa cctttcagac ggcatcgtgc cggattccgc gtcagattgc gctgccgccg
     3121 acggtcagcc cggcatcgat acgcagggtc ggctgcccca cgccgacggg gacgctctgc
     3181 ccttctttgc cgcacacgcc gacaccgctg tccaacgcgg tatcgttgcc tatcatcgaa
     3241 acgtgtttca gcacttcggg cccgttgccg ataatggtcg cgcctttgac ggggtattgc
     3301 agcctgccgc cttccaccca ccatgcttcg gacgcgctga acacaaattt gccgctggta
     3361 atgtccacct gtccgccgcc aaagttgacg gcgtaaatgc ctttgtcgat ggacgcgatg
     3421 atttcttccg gctcatagct gccattttcc ataaaggtat tggtcatgcg cggcatcggg
     3481 acggaggcgt agctttcgcg gcggccgttg ccggtggatt gcgtacccgt caggcgggca
     3541 ttggtttcgt cctgcatata gccgactaaa atgccgtctt caatcaatac ggtgcggcgg
     3601 gtttcgttgc cttcgtcgtc gatgttgagc gaaccgcgcc ggccggcaat atcgccctga
     3661 tcgacgacgg taacgccttt ggcggcgacg cgctcgccta ttctgccgga aaagacgctg
     3721 gtccccttgc ggttgaaatc gccttccaaa ccgtgtccga ccgcttcgtg cagcaacacg
     3781 cccggccagc cgttgcccaa aacgacggtc atttcgccgg cgggcgcggg gcgggattcg
     3841 aggttggtga gtgcctgttt gacggcggca tcgacaaact gccgcaccaa gttttcatcg
     3901 aaataagcca agtcgtagcg tccgccgccg cccgcgctgc cctgttcgcg gcgttcgccc
     3961 tgtttggcga tgacggtaac gttcaggcgc accatcgggc ggatgtcggc ggcgtgtttg
     4021 ccgtccagac gggcgaggta aaccatatcg tattcgcagg tcaaaccggc catcacttgc
     4081 acgatgcgcg gatcggcggc tttggcgatt gcttccactt tgttcaacag cgcgactttg
     4141 gcggcggaat cgaggccggc aatggggtcg gacgcggaac aaaccggctt gccgcgcgtt
     4201 tcagacggca ttttggcgga caccttgccg cctgccgccc caatcgcgcg gacggcgcgg
     4261 gcggaacggt ttatcgaatc gatgcacagg ctgtcggcgt aggcaaaggc ggttttgtcg
     4321 cccgaaacgg cgcgcacgcc cacgccctga ttgatttgga agctgcccga tttgacgatg
     4381 ccctcttcca aatgccagct ttcataagcg gtgcgctggc agtagatgtc ggcgtaatcg
     4441 acgtggtgcg cgccgatgat gcacaggctt ttggcgagca gttcggggga aaggcggttg
     4501 gcttcgagca gccgcgcctg tacggcggaa taggtcggat gcatagtgtc ggcgcataaa
     4561 aaatcagggg cttgattata cggcatttgt tatatagtgg attaacaaaa a
//
LOCUS       DAWGKF010000149         4555 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.149, whole genome shotgun sequence.
ACCESSION   DAWGKF010000149 DAWGKF010000000
VERSION     DAWGKF010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4555)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4555)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4555
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.149"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            291..1412
                     /gene="dnaJ"
                     /locus_tag="WHR07_001733"
     CDS             291..1412
                     /gene="dnaJ"
                     /locus_tag="WHR07_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEZ2130923.1"
                     /translation="MSNQDFYATLGVARTATDDEIKKAYRKLAMKYHPDRNPDNKEAE
                     EKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQ
                     MFGGGSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGTS
                     PETCPTCKGSGTVHIQQAIFRMQQTCPTCHGAGKHIKEPCVKCRGAGRNKAVKTVEVN
                     IPAGIDDGQRIRLSGEGGPGMHGAPAGDLYVTVRIRAHKIFQRDGLDLHCELPISFAT
                     AALGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPV
                     NLTDRQKELLEEFERISTGLENQTPRKKSFLDKLRDLFD"
     gene            1608..3626
                     /locus_tag="WHR07_001734"
     CDS             1608..3626
                     /locus_tag="WHR07_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HEZ2130924.1"
                     /translation="MNKSLSGSVEEYRELTLRGMILGALITVIFTASNVYLGLKVGLT
                     FASSIPAAVISMAVLKFFKGSNILENNMVQTQASAAGTLSTIIFVLPGLLMAGYWSGF
                     PFWQTTLLCIAGGILGVIFTIPLRYAMVVKSDLPYPEGVAAAEILKVGGHEEGDNRQG
                     GSGIKELAAGGALAGLMSFCAGGLRVIADSASYWFKSGTAIFQLPMGFSLALLGAGYL
                     VGLTGGIAILLGISIAWGIAVPYFSSHIPQPSDMEMAAFAMKLWKEKVRFIGAGTIGI
                     AAVWTLLMLLKPMVEGMKMSFKSFGGGAPAAERAEQDLSPKAMIFWVLAMMFVLGVSF
                     YHFIGDSHITGGMAWLLVVVCTLLASVIGFLVAAACGYMAGLVGSSSSPISGVGIVSV
                     VVISLVLLLVGESGGLLADEANRKFLLALTLFCGSAVICVASISNDNLQDLKTGYLLK
                     ATPWRQQVALIIGCIVGALVISPVLELLYEAYGFTGAMPREGMDAAQALAAPQATLMT
                     TIASGIFAHNLEWVYIFTGIAIGAVLIAADLVLKKSSGGKLALPVLAVGMGIYLPPSV
                     NMPIVAGAVLAAVLKHIIGKKAENREGRLKNAERIGTLFSAGLIVGESLIGVIMAFII
                     AFSVTNGGSDAPLALNLQNWDAAASWLGLAFFVTGMIIFARRVLKAGR"
     gene            complement(3670..4227)
                     /gene="rfbC"
                     /locus_tag="WHR07_001735"
     CDS             complement(3670..4227)
                     /gene="rfbC"
                     /locus_tag="WHR07_001735"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HEZ2130925.1"
                     /translation="MNIIDTAIPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTF
                     VQENHSKSGKGVLRGLHYQTENTQGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILS
                     AENKRQLWVPEGFAHGFYVLSDEAEFVYKCTDYYNPEAEHSLIWNDPTVGIDWPLQGE
                     PNLSPKDLAGKTWAQAEKLRLTLSR"
     gene            complement(4281..>4555)
                     /locus_tag="WHR07_001736"
     CDS             complement(4281..>4555)
                     /locus_tag="WHR07_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase"
                     /protein_id="HEZ2130926.1"
                     /translation="DLNRMYLEDGSLSVQILGRGFAWLDTGTHESLHEAASFVQTVQN
                     IQNLHIACLEEIAWRNGWLSDEKLEELARPMAKNQYGQYLLRLLKK"
BASE COUNT          953 a         1037 c         1349 g         1216 t
ORIGIN      
        1 gctgcccgcg gataaaaaat aaaataaggg gaagtctgca gccgcatcaa atgccgtctg
       61 aacatgcgtt cgggcggcgt ttttataaca aaaacacttc atggcggttg gttttatgcc
      121 tgtctaagtt tttgtgtcgt gcatacctga agatttcaga cggcatcggt ttatgctgtc
      181 tgaaaagtgt attccgtttc agtttgtaag ctatggcagt ctgtttgtct tgtgttttgc
      241 gcaattgccc ttattttgag ccgtgatttt attttgaatt agatgaaaaa atgagtaatc
      301 aagattttta tgcgacgctg ggtgtggcaa gaacagctac cgatgatgag attaaaaaag
      361 cctaccggaa attggcaatg aaataccatc ccgaccgcaa tcctgacaat aaagaggcgg
      421 aagagaagtt taaagaagta caaaaggcgt atgaaacttt gtccgacaag gaaaagcgcg
      481 ctatgtacga ccagtatggt catgcggcgt ttgaaggcgg cggacagggg ggcttcggag
      541 ggtttggcgg atttggcggt gcgcagggtt ttgactttgg ggatattttc agccaaatgt
      601 ttggaggcgg ttcggggcgc gcccagcctg attatcaggg tgaggacgtt caagtcggta
      661 tcgaaatcac gcttgaagaa gccgcaaaag gtgtgaagaa acgcatcaat attccgactt
      721 atgaagcgtg tgatgtctgt aacggcagtg gcgcgaaacc ggggacatcc ccggaaacct
      781 gcccgacttg caaaggttcg ggtacggtgc acatccagca ggcgattttc cgtatgcagc
      841 agacttgtcc gacctgccac ggtgcgggca aacacattaa agaaccttgc gtcaaatgcc
      901 gtggcgcggg gcggaataag gcggtcaaga cggtggaagt caatattccc gccggtatcg
      961 atgacgggca gcgtatccgt ttgagcggcg aaggcgggcc gggtatgcac ggtgcgcctg
     1021 ccggcgactt gtatgtaacc gtccgcattc gggcgcataa gattttccaa cgcgacggtc
     1081 tggacttgca ttgcgaactg ccgatcagtt ttgccacggc tgctttgggc ggggagttgg
     1141 aagtgccgac cttggacgga aaggtcaagc tcaccgtccc caaagaaacc caaaccggca
     1201 ggaggatgcg cgtgaagggt aagggtgtca aatctttacg cagcagcgcg accggcgatt
     1261 tgtactgcca tattgttgtc gaaacgcctg tcaatttgac cgaccgtcaa aaagagcttt
     1321 tggaagaatt tgagcggatt tctaccggct tggaaaacca aacaccgcgc aagaaatcgt
     1381 ttttagacaa gctgcgcgat ttgtttgatt gattttaagg ttcggaaaca agcagccgta
     1441 tcggggaatc tccctgatac ggctgttttt gtttgtttaa aaatagtttt tattttcaat
     1501 ggggtatggg gcagggtggg ataactgttt ttaactgttc tttttaaaac ttgacatcat
     1561 ggcgcgatgc caacaatatg tgaacgtctg ttgtcaaagg aagaataatg aataaatctt
     1621 tatccgggtc ggtagaagaa taccgcgaac tgacgctccg aggcatgata ctcggtgcat
     1681 tgatcactgt aatttttact gcgtccaacg tttacctcgg tttgaaagtc gggctgacct
     1741 ttgcctcgtc gattccggcg gcggtgattt cgatggcggt tttaaagttt ttcaaaggca
     1801 gcaatatttt ggaaaacaac atggtgcaga cccaagcttc ggcggcgggt acgctttcga
     1861 ccatcatctt cgtcctgccc ggtttgctga tggcgggcta ctggagcggt ttcccgttct
     1921 ggcagacgac gcttttatgt attgccggcg ggattttggg ggtgattttc accattccgc
     1981 tgcgttacgc gatggtggtg aaaagcgatt tgccttatcc ggaaggtgtg gcggctgctg
     2041 aaattttgaa agtgggcggt catgaagaag gggataaccg tcagggcggc agcggcatca
     2101 aagagctggc ggccggcggt gcgttggcgg gattgatgag cttttgcgcc ggaggtctgc
     2161 gcgtgattgc cgacagcgcg agttattggt ttaaaagcgg tacggcgatt ttccagctgc
     2221 cgatgggctt ttcactggca ttgttgggcg cgggctattt ggtcggactg acgggcggta
     2281 tcgccatcct gttgggcatt tcgattgctt ggggcattgc cgtgccgtat ttctcctcac
     2341 acattccgca accttccgat atggaaatgg cggcgtttgc gatgaagctg tggaaggaga
     2401 aagtgcgttt tatcggtgcg gggactattg gcattgcggc ggtttggacg ctgttgatgc
     2461 tgctcaagcc gatggtggaa ggcatgaaga tgtcgttcaa gagttttggc ggcggtgcgc
     2521 ccgctgcgga acgcgccgaa caggatttgt cgcctaaggc tatgattttt tgggtgctgg
     2581 cgatgatgtt tgttttaggc gtgtcgtttt accactttat cggcgattcg cacattacgg
     2641 gcggcatggc ttggcttttg gtggtcgttt gcacgctttt ggcttccgtc atcggctttt
     2701 tggtcgccgc cgcctgcggt tatatggcag gtttggtcgg ctcgtcttcc agcccgattt
     2761 ccggcgtggg catcgtgtcc gtcgtcgtta tttcactggt tttgctgctg gtaggcgaat
     2821 ccggaggttt gttggcggat gaggctaacc gcaaattttt gctggcactg actttgtttt
     2881 gcggctcggc agtaatctgc gtggcttcga tttccaatga caacctgcaa gacttgaaaa
     2941 ccggctacct gctcaaagcc acgccttggc ggcagcaagt cgccctgatt atcggctgta
     3001 tcgttggtgc gctggttatt tcgcccgtgt tggaactgct ttacgaagcc tacggcttta
     3061 ccggcgcaat gccgcgcgaa ggcatggatg cggcgcaggc tttggcagcc cctcaagcga
     3121 ctttgatgac gaccatcgcg tcgggcattt tcgcccacaa ccttgaatgg gtctatatct
     3181 ttaccggcat cgcgattggc gcggtgttga ttgccgccga tttggtgttg aaaaaatcat
     3241 caggcggcaa acttgccctg cccgtccttg cggtcggtat gggtatttat ctgccgccgt
     3301 ccgtcaatat gcccatcgtg gcaggcgcgg tgttggcggc ggtgttgaaa cacatcatcg
     3361 gtaaaaaagc ggaaaaccgt gaaggccgtc tgaaaaacgc cgagcgcatc ggaaccttgt
     3421 tctccgccgg tctgattgtc ggtgaaagtc tgattggtgt gattatggcg tttattattg
     3481 ccttctccgt gaccaacggc ggctcggacg cgccgctcgc gttgaatctg caaaactggg
     3541 atgccgccgc ttcttggctg ggcttggcgt tcttcgttac cggaatgatt atttttgcac
     3601 ggcgcgtact gaaggcgggt aggtagcctg tcggagaaaa tgccgtctga aacgttcaga
     3661 cggcattttt tatcgggaaa gtgtaaggcg gagcttttcg gcttgcgccc acgttttgcc
     3721 ggcaaggtct ttgggcgaca ggttcggctc gccttgtagc ggccagtcga tgccgacggt
     3781 cggatcattc caaattagtg agtgttcggc ttcagggttg taatagtctg tgcatttata
     3841 gacgaactcg gcttcatcgc tcagtacata gaagccgtgt gcgaaacctt cgggtaccca
     3901 cagttggcgt ttgttttctg cggacagaat ctcgcctacc catttgccga aagtggggga
     3961 gtctttacgc atatcgacgg ccacgtcgaa tacttcgccg acaactacgc gtacgagttt
     4021 gccttgtgtg ttttcggttt ggtagtgcag gccgcgcaat acgcctttgc cggatttgga
     4081 gtggttttcc tgcacgaagg tgcgttcgca gacttgggtt ttaaaccact cgtcgcggaa
     4141 ggtttccata aaaaagccgc gcgcgtcgcc gaagacttgg ggctcaagca gttttacgtc
     4201 aggaatggcg gtatcaatga tgttcatctt tttatctttc atctaaaggc cgtctgaaaa
     4261 gtttcagacg gcctcaaaca ttattttttc aacaggcgca gcaaatattg gccgtattgg
     4321 tttttcgcca tcgggcgcgc caattcttcc agtttttcat cggaaagcca accgttgcgc
     4381 caagcgattt cttccaggca ggcgatgtgc aggttttgga tgttttgcac ggtttggacg
     4441 aacgaagccg cctcgtgcag gctttcgtgc gtaccggtgt ccagccacgc gaaaccgcgt
     4501 cccaatattt gaacggagag cgagccgtct tccaaataca tccggttgag gtcgg
//
LOCUS       DAWGKF010000150         4553 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.150, whole genome shotgun sequence.
ACCESSION   DAWGKF010000150 DAWGKF010000000
VERSION     DAWGKF010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4553)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4553)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4553
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.150"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            197..2044
                     /locus_tag="WHR07_001737"
     CDS             197..2044
                     /locus_tag="WHR07_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEZ2130927.1"
                     /translation="MYLPSMKHSLPLLAALVLAACSSTHAPSGKTLADNIETAGLSAS
                     VPPRPAEPEGKTLADYSSYPSALDAVKQKNDTAVAAYLENAGDSAMAENVRNEWLKSL
                     GARRQWTLFAQEYAKLEPAGRAQEVECYADSSRNDYTRAAELVKNTGKLPSGCTKLLE
                     QAAASGLLDGNDAWRRVRGLLAGRQTTDARNLAAALGSPFDGGTQGSREYALLNVIGK
                     EARKSPNAAALLSEMESGLSLEQRSFAWGVLGHYQSQSLNVPAALDYYGKVADRRQLT
                     DDQIEWYARAALRARRWDELASVISHMPEKLQKSPTWLYWLARSRAATGNTQEAEKLY
                     KQAAATGRNFYAVLAGEELGRKIDTRNNVPDAGKNSVLRMAEDGAIKRALVLFRNSRT
                     AGDAKMRRQAQAEWRFATRGFDEDKLLTAAQTAFDHGFYDMAVNSAERTDRKLNYTLR
                     YISPFKDTVIRHAQNVNVDPAWVYGLIRQESRFVMGAQSGVGAQGLMQVMPATAREIA
                     GKIGMDAAQLYTADGNIRMGTWYMADTKRRLQNNEVLATAGYNAGPGRARRWQADIPL
                     EGAVYAETIPFSETRDYVKKVMTNAAYYASLFGAPHIPLKQRMGIVPAR"
     gene            2333..2545
                     /locus_tag="WHR07_001738"
     CDS             2333..2545
                     /locus_tag="WHR07_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEZ2130928.1"
                     /translation="MPAIRVKENEPFEVAMRRFKRAVEKTGLLTELRAREAYEKPTTE
                     RKRKKAAAVKRLQKRLRSQQLPPKMY"
     gene            2677..3123
                     /locus_tag="WHR07_001739"
     CDS             2677..3123
                     /locus_tag="WHR07_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HEZ2130929.1"
                     /translation="MSLKIRLTEDMKTAMRAKDQVSLGTIRLINAAVKQFEVDERTEA
                     DDAKITAILTKMVKQRKDSAKIYTEAGRQDLVDKENAEIEVLHRYLPQMLSAGEIRTA
                     VEAAVAETGAAGMADMGKVMGVLKTRLAGKADMGEVNKILKAVLTA"
     gene            complement(3201..3443)
                     /locus_tag="WHR07_001740"
     CDS             complement(3201..3443)
                     /locus_tag="WHR07_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130930.1"
                     /translation="MPSERNRVSDGILSDGAQTESVYRQNPFRCIETVLPLPIRYWDV
                     IASALECNYGAANQAIERQRQRAAAVAVHERVAKFL"
     gene            complement(3448..3840)
                     /locus_tag="WHR07_001741"
     CDS             complement(3448..3840)
                     /locus_tag="WHR07_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HEZ2130931.1"
                     /translation="MPTSTKPYILRALCEWCSDNSLTPHILVWVNEHTRVPMQYVRDN
                     EIMLNIGATATQNLQIDNDWISFSARFGGQAHDIWIPVGHVLSLFARETGEGMGFELE
                     AYRPDTPPENTSAETAPRPAKKGLKLVK"
     gene            complement(3911..4516)
                     /locus_tag="WHR07_001742"
     CDS             complement(3911..4516)
                     /locus_tag="WHR07_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEZ2130932.1"
                     /translation="MMTLYSGITCPFSHRCRFVLYEKGMDFEIKDVDIYNKPEDLAVM
                     NPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLMPGDPVMRGRGRLVLYRMEKELF
                     NHVQVLENPAATNKEQAKAREAIGNGLTMLAPSFSKSKYILGEDFSMIDVALAPLLWR
                     LDHYDVKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMRK"
BASE COUNT         1104 a         1265 c         1251 g          933 t
ORIGIN      
        1 accttagaga atcgttctct ttgagctaag gcgaggcaac gctgtactgg tttaaattta
       61 atccactata aattatgtcg gaaacattcc aaaggcggtg cagtttcggc atataattcg
      121 ggcaaacgcc tgttcagacg gcattttgtc ttttccaacc ctgaccgttc agggttctga
      181 ttcttaagga aatccgatgt acctaccctc tatgaagcat tccctgccgc tgctggcggc
      241 tctggtgctt gccgcgtgtt cttcgacaca cgcgcccagc ggcaagaccc tggcagacaa
      301 tatagaaact gccggtcttt cggcaagcgt tcccccccgc cctgccgaac ccgaaggaaa
      361 aacgctggca gattacagca gctacccttc cgcactggat gcagtgaaac agaaaaacga
      421 taccgccgtc gccgcctatt tggaaaacgc cggcgacagc gcgatggcgg aaaatgtccg
      481 caacgagtgg ctgaagtctt tgggcgcacg cagacagtgg acgctgtttg cacaggaata
      541 tgccaaactc gaaccggcag ggcgcgccca agaagtcgaa tgctacgccg attcgagccg
      601 caacgactat acgcgtgccg ccgaactggt caaaaatacg ggcaaactgc cttcgggctg
      661 caccaaactg ttggaacagg cagccgcatc cggcttgttg gacggcaacg acgcctggag
      721 gcgcgtacgc ggactgctgg ccggtcgcca aaccacagac gcacgcaacc ttgccgccgc
      781 attgggcagc ccgtttgacg gcggtacaca aggttcgcgc gaatatgccc tgttgaacgt
      841 catcggcaaa gaggcgcgta aatcgccgaa tgccgccgcc ctgctgtccg aaatggaaag
      901 cggtttaagc ctcgaacaac gcagtttcgc gtggggcgta ttggggcatt atcagtcgca
      961 aagcctcaat gtgcctgccg ccttggacta ttacggcaag gttgccgacc gccgccaact
     1021 gaccgacgac caaatcgagt ggtacgcccg cgccgccttg cgcgcccgac gttgggacga
     1081 gctggcctcc gttatctcgc atatgcccga aaaactgcaa aaaagcccga cctggctcta
     1141 ctggctggca cgcagtcgcg ccgcaacggg caacacgcaa gaggcggaaa aactttacaa
     1201 acaggcagca gcgacgggca ggaattttta tgcggtgctg gcgggggaag agttggggcg
     1261 caaaatcgat acgcgcaaca atgtgcccga tgccggcaaa aacagcgtcc tccgtatggc
     1321 ggaagacggc gcgattaagc gcgcgctggt gctgttccga aacagccgaa ccgccggcga
     1381 tgcgaaaatg cgccgtcagg ctcaggcgga atggcgtttt gccacacgcg gctttgacga
     1441 agacaagctg ctgaccgccg cgcaaaccgc gttcgaccac ggtttttacg atatggcggt
     1501 caacagcgcg gaacgtaccg accgcaaact caactacaca ttgcgctata tttcgccgtt
     1561 taaagacacg gtaatccgcc acgcgcaaaa tgttaatgtc gatccagcgt gggtttacgg
     1621 gctgattcgt caggaaagcc gcttcgttat gggcgcgcaa tccggcgtag gcgcgcaggg
     1681 gctgatgcag gttatgcctg ccaccgcgcg cgaaatcgcc ggcaaaatcg gtatggatgc
     1741 cgcacaactt tacaccgccg acggtaatat ccgtatgggg acgtggtata tggcggacac
     1801 caaacgccgc ctgcaaaaca acgaagtcct cgccaccgca ggctataacg ccggccccgg
     1861 aagggcgcgc cgatggcagg cggatatccc ccttgagggt gcggtatatg ccgaaaccat
     1921 cccgttttcc gaaacgcgag actatgtcaa aaaagtgatg accaatgccg cctactacgc
     1981 cagcctcttc ggtgcgccgc acatcccgct caaacagcgt atgggcattg tccccgcacg
     2041 ctgacgtatc gatgccgtct gaaacccgcc cggtctttca gacggcattt ttatcccgaa
     2101 cggcattgac ggcgaaccat aaatataaga caatccggaa attgtttttc ctgctttttc
     2161 aagcagcttg acacggcaca agccgacccg ttaggaggtg atgtttccgt cacggcgcgt
     2221 atcccgccgc cgcaaggcac agcgatacgg taaaccttca acaccgtctg ccctaccctt
     2281 tccaccgata tgatgggcag atgcaacaac cgaatttatt aaaggaaata aaatgcctgc
     2341 aatccgcgta aaagagaatg aaccatttga agtcgctatg cgccgtttca aacgcgccgt
     2401 agaaaaaacc ggcctgctga ccgagctgcg cgcccgcgaa gcctacgaaa aaccgactac
     2461 cgaacgcaaa cgcaaaaaag cggcagccgt aaaacgcctg caaaaacgcc tgcgcagcca
     2521 acaactgccg cccaaaatgt actaaacgtt caagtacaga ttacaggtca gccctgtgat
     2581 atgaggacac accgcaagac ctgctctgcg gtgtgttttg cttttcagac ggcatcgaaa
     2641 cccgccgttt ccatccgaca tcccagcgag gacattatga gcctgaaaat ccgccttacc
     2701 gaagacatga aaaccgcgat gcgcgccaaa gaccaagttt ccctcggcac catccgcctc
     2761 atcaacgccg ccgtcaaaca gtttgaagtg gacgaacgca ccgaagccga cgatgccaaa
     2821 atcaccgcca tcctgaccaa aatggtcaaa cagcgcaaag acagcgcgaa aatctacact
     2881 gaagccggcc gccaggattt ggtagacaaa gaaaacgccg aaatcgaggt actgcaccgc
     2941 taccttcccc aaatgctctc tgccggcgaa atccgtactg cggtcgaagc cgccgttgcc
     3001 gaaaccggcg cggcaggtat ggcggatatg ggcaaagtga tgggcgtatt gaaaacccga
     3061 cttgccggca aagccgatat gggcgaagtc aacaaaatcc tgaaagccgt actgaccgcc
     3121 tgattgcccg aatatcggac aaaatgccgt ctgaagcccg tatcgcaggt tcagacggca
     3181 ttttcatggt ttgatgatat ttataaaaat tttgcaacac gctcatgcac agcaactgcc
     3241 gctgctcgtt ggcgttgccg ctctatcgct tggttagctg caccataatt gcactctaat
     3301 gctgatgcaa taacgtccca atatcgaatt ggcaggggca acacggtttc gatacaccga
     3361 aacgggtttt gccgataaac ggattccgtt tgcgccccat cggacaaaat gccgtctgaa
     3421 acacgattcc gttcagacgg catagattta tttgaccaat ttcaagcctt ttttggcggg
     3481 ccggggcgcg gtttcggcag aggtgttttc aggcggcgtg tcggggcgat acgcttccaa
     3541 ttcaaacccc ataccttctc cggtctcccg tgcgaaaagg ctgaggacgt gtccgacagg
     3601 tatccatata tcgtgcgcct gtccgccgaa gcgggcggaa aaactgatcc aatcgttgtc
     3661 gatttgaagg ttttgcgtgg cggtcgcgcc gatgttgagc ataatttcgt tgtcgcggac
     3721 atactgcata ggaacgcgcg tgtgttcgtt gacccagaca aggatgtgcg gtgtgaggct
     3781 gttgtcgctg caccattcgc agagggcgcg gaggatgtag ggtttggtgg aagtgggcat
     3841 aatggttccg tgttgtacgc caaaatagga aaatgcctgc aaaacagtgg gttttgcaag
     3901 catttcggac ttatttgcgc atggcttttt cggcgggtgt cagtgcttcg ataaaggctt
     3961 cgcgctggaa gatgcgctcg gcgtatttga gcagcggcgc ggcacttttg cccagtttga
     4021 catcgtagtg gtcgagccgc cacagcagcg gagcaagggc gacatcaatc atagaaaaat
     4081 cttcgccgag gatgtatttg cttttgctga acgaaggggc aagcatggtc agaccgttgc
     4141 cgatggcttc gcgcgctttt gcctgttcct tgttggtggc ggcggggttt tccaaaactt
     4201 ggacgtggtt gaacaattct ttttccatac ggtacagcac cagccggccc ctgccgcgca
     4261 taacgggatc accgggcata agctgcggat gggggaagcg ttcgtcgatg tattcgttga
     4321 tgatgttgga ctcgtgcagc accaaatcgc gctcgaccag tacggggacc tggttgtacg
     4381 ggttcatgac ggcgaggtct tcgggtttgt tgtaaatatc gacgtctttg atttcaaaat
     4441 ccataccttt ttcgtacaaa acgaagcggc agcggtggct gaaggggcag gtaatgccgg
     4501 aatagagggt catcataata attgtcgctc ctgtgtgatg cctacaaaac ggc
//
LOCUS       DAWGKF010000151         4540 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.151, whole genome shotgun sequence.
ACCESSION   DAWGKF010000151 DAWGKF010000000
VERSION     DAWGKF010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4540)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4540)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4540
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.151"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(149..1087)
                     /locus_tag="WHR07_001743"
     CDS             complement(149..1087)
                     /locus_tag="WHR07_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ2130933.1"
                     /translation="MLELNGLCKRFGNKTVADNICLTVGRGKILAVLGRSGCGKSTLL
                     NMIAGIVRPDGGEIWLNGENITRMPPEKRRISLMFQDYALFPHMSALENAAFGLKMQK
                     MPKAEAERLAMAALAEVGLENEAHRKPEKLSGGEKQRLALARALVVRPSLLLLDESFS
                     SLDTHLRDRLRRMTAERIRKGGIPAVLVTHSPEEACTAADEIAVMHEGKILQCGTPET
                     LVQTPAGVQVARLMGLPNTDDDRHIPQHAVRFDQDGMECRVLSRTCLPESFSLSVLHP
                     EHGILWLNLDMPHAGEISGNDTVRIHIEDREIVRFR"
     gene            complement(1096..1971)
                     /locus_tag="WHR07_001744"
     CDS             complement(1096..1971)
                     /locus_tag="WHR07_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEZ2130934.1"
                     /translation="MPTVRFTESVSKHDLDALFEWAKASYGAESCWKTLYLNGLPLGN
                     LSPEWAERVKKDWEAGCSESSDGIFLNADGWSDMGGRLQHLTRTWNKAGLLHGWRNEC
                     FDLTDGGGNILFSLERAAFRPFGLLSRAVHLNGLTESDGRWHFWIGRRSPHKAVDPDK
                     LDNTAAGGVSSGELPSETVCRESSEEAGLDKTLFPLIRPVSQLHSLRPVSWGVHNEIL
                     YVFDAVLPETFLPENQDGEVACFEKMDIGSLVATMLSGNMMHDAQLVTLDAFCRYGLI
                     DAAHPLSEWLDGIRL"
     gene            complement(2153..2229)
                     /locus_tag="WHR07_001745"
     tRNA            complement(2153..2229)
                     /locus_tag="WHR07_001745"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2193..2195),aa:Met,seq:cat)
     regulatory      2379..2478
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            2569..4470
                     /gene="thiC"
                     /locus_tag="WHR07_001746"
     CDS             2569..4470
                     /gene="thiC"
                     /locus_tag="WHR07_001746"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HEZ2130935.1"
                     /translation="MTTPKKTAKTSGNEARELADLSEDIGIRFKYPNSERVYLQGSRD
                     DIRVPLREIRQDDTYTAQGAEANPPIPVYDTSGVYGDPAAHIDLKQGLPHIRTAWLNE
                     RGDTEILPKLSSEYGIERAHDPKTAHLRFNQITRPRRAKSGGNVTQLHYARRGIITPE
                     MEFVAIRERLKLDELSQKSEYAKLLKQHAGQSFGANIPTHPDQITPEFVRREIAAGRA
                     IIPANINHPELEPMIIGRNFRVKINGNLGNSAVTSSLTEEVEKMVWSLRWGADTIMDL
                     STGAHIHETREWIIRNAPVPIGTVPIYQALEKTGGIAEDLTWDLFRDTLIEQAEQGVD
                     YFTIHAGVLLRYVPMTADRLTGIVSRGGSIMAKWCLAHHRENFLYTHFDEICEIMKAY
                     DVSFSLGDGLRPGCIADANDESQFAELHTLGELTSKAWKHDVQVMIEGPGHVPLQRVK
                     ENMTEELQHCFEAPFYTLGPLVTDIAPGYDHITSGIGAANIGWYGTAMLCYVTPKEHL
                     GLPDKEDVRTGIITYKLAAHAADLAKGWPGAQLRDNALSKARFEFRWRDQFRLSLDPE
                     RAESFHDETLPAEGAKIAHFCSMCGPKFCSMKITQEVRDYADKQKAQRQGMEEKAVEF
                     VKKGAKIYS"
BASE COUNT         1092 a         1302 c         1199 g          947 t
ORIGIN      
        1 gttctagatt cccgcttttg cgggaatgac ggcagggtgg tttctgttgt ttcggataaa
       61 ttttgcagcc ctgataaaaa atatggctgc tttggtaaaa aaatgccgtc tgaaaggttt
      121 tcagacggca ttttgttttt aagaagcatc aacggaagcg gacgatttcc ctgtcttcga
      181 tatggatgcg taccgtatcg tttcccgata tttcaccggc gtgcggcata tcgaggttca
      241 gccacaggat gccgtgttcc ggatggagga cggacaggct gaacgattcg ggcaaacagg
      301 tacgggataa tacgcggcac tccatgccgt cttggtcgaa acgcaccgca tgttgcggaa
      361 tatggcggtc atcgtcggta ttgggcaaac ccatcagtcg ggcgacctgc acgccggcag
      421 gcgtttgaac caaggtttcg ggcgtaccgc attgaaggat tttcccctcg tgcatgacgg
      481 cgatttcgtc cgccgccgtg caggcctctt cgggcgaatg cgtcaccaaa acggcaggga
      541 tgccgccctt gcggatacgt tcggcagtca tgcggcgcag ccggtcgcgc aaatgcgtgt
      601 ccaaactgga aaacgattcg tccaacagca gcagggaagg gcggacaacc aaagcgcgcg
      661 ccaacgccaa ccgttgcttc tcgcctccgg aaagtttttc aggcttgcgg tgcgcctcgt
      721 tttccagtcc gacttcggca agtgccgcca tggcaaggcg ttcggcttcg gctttcggca
      781 ttttttgcat tttcaaaccg aatgccgcat tttccagcgc actcatatgg ggaaacagcg
      841 cgtaatcttg aaacatcaga gaaatacggc gtttttcggg cggcatacgg gtaatgtttt
      901 ccccgttcag ccatatttcc ccaccgtccg gccggacaat ccccgcaatc atattcagca
      961 gggtggattt tccgcatccc gaccgcccca aaacggcgag tattttgccg cgcccgacag
     1021 tcaggcagat gttgtcggcg acggttttat tgccgaagcg tttgcagagt ccgttcagtt
     1081 caagcatggc gcatcctata aacgtatgcc gtccagccac tcggacagcg gatgggcggc
     1141 atcaatcaga ccgtaacggc aaaacgcgtc cagcgtaacc agttgcgcgt cgtgcatcat
     1201 gtttcccgac aacatggtgg caaccaagct gccgatgtcc attttctcaa aacacgcaac
     1261 ctcaccgtcc tgattttcag gtaggaaggt ttcgggcagg acggcatcga atacatacag
     1321 gatttcattg tgcacacccc agctgacggg gcgcaggctg tgcagctgcg ataccgggcg
     1381 gatgagcgga aacagcgttt tatccaaacc ggcttcttcg ctgctttcgc gacacacggt
     1441 ttcagacggc aattcaccgc tggaaacacc gccggcggca gtattgtcga gtttgtcggg
     1501 atcgactgct ttgtgcggac tgcgcctgcc tatccagaaa tgccatcggc cgtccgattc
     1561 ggtcagaccg ttgagatgga cggcgcggct gagtagtccg aacgggcgga aagcggcgcg
     1621 ttcaagtgag aacaagatat tgccgccgcc gtcggtcagg tcgaaacact cgttgcgcca
     1681 tccgtgaagc agccccgcct tgttccatgt gcgggtgagg tgctgcaagc ggccgcccat
     1741 atctgaccag ccgtccgcat tcagaaaaat gccgtctgaa gactccgagc agcctgcctc
     1801 ccagtctttt ttgacgcgct ccgcccattc cggcgacagg ttgcccaaag gcaggccgtt
     1861 cagatacagt gttttccagc aactttctgc accgtaactt gcttttgccc actcgaacag
     1921 ggcatcaagg tcgtgtttgc tgacggattc ggtaaaacgg acggtcggca tagtcggctt
     1981 tcttgaagac aatgcggaag attgtagcca aactgcctga atttgcaacc gcaaacagac
     2041 ggcgggctgc cgttccgata ttgcggcagg aaggaaaatc cggcaaaaaa cggaggcggc
     2101 aggaaacagg caaaacaaaa cccctcggca ttgaaccgag gggtttgata tttggttgcg
     2161 ggagcaggat tcgaacctac gaccttcggg ttatgagccc gacgagctac catgctgctc
     2221 catcccgcgt cagaagatga aactatacgg cagatttttt atgttgtcaa acattatttc
     2281 cgcgaaaaat cataaaattt tgccgtccgg cggtttatgc ctgatttgaa atatcatttt
     2341 ctttacaaaa gttcatgttc gtgatttaat tttggttaac atcgaaacag gggtgctgcc
     2401 tgatgttcag gcggctgaga aatacccttt acacccgatc gggataatac ctgcgtgggg
     2461 agttttcacg gattctgtct ttcagacagc attggttttc aaatgccgtc tgaaaacgca
     2521 aaacgctcct gtttctttat tctaaacgag aaaacaggag cattttttat gactacgcca
     2581 aaaaaaaccg ccaaaacttc cggcaacgaa gcgcgcgaac ttgccgactt gagcgaagac
     2641 atcggtatcc gcttcaaata tccgaactcg gaacgcgtgt atctgcaagg cagccgcgac
     2701 gacatccgcg tgcctttgcg tgaaatccgt caggacgaca cctatacggc gcaaggcgcg
     2761 gaagccaacc cgccgattcc cgtctatgac accagcggcg tgtacggcga tccagcggca
     2821 cacatcgacc tgaaacaagg cctgccgcac atccgcaccg catggctgaa cgaacgcggt
     2881 gataccgaaa tcctgcccaa gctctccagc gaatacggca tcgaacgcgc acacgatccg
     2941 aaaaccgccc atctgcgctt caaccaaatc acccgcccgc gccgcgcgaa aagcggcggc
     3001 aacgttaccc agcttcacta cgcgcgccgc ggcatcatca cgcccgaaat ggagtttgtc
     3061 gccatacgcg aacgtttaaa attagacgaa ttgtcccaaa aatcggaata cgccaaactc
     3121 ttgaaacagc acgcagggca aagtttcggc gcgaatatcc cgacccatcc cgaccaaatc
     3181 acgcctgaat tcgtgcgccg agaaattgcc gccggacgcg cgattatccc cgccaacatc
     3241 aaccaccccg aactcgaacc gatgattatc ggccgcaact tccgcgtcaa aatcaacggc
     3301 aacttgggca attccgccgt cacttccagc ctgaccgaag aagtcgaaaa aatggtgtgg
     3361 tcgctgcgtt ggggcgcgga cacgattatg gatttgtcca ccggcgcgca catccatgaa
     3421 acgcgcgaat ggattatccg caacgcgccc gtccccatcg gcaccgtgcc gatttaccaa
     3481 gcgttggaaa aaaccggcgg cattgccgaa gatttgactt gggatttgtt ccgcgacacc
     3541 ttaatcgagc aggcggaaca aggcgtggac tatttcacca tacacgcagg cgtgttgctg
     3601 cgttatgtgc cgatgactgc cgaccgcctc accggcatcg tatcgcgcgg cggttcgatt
     3661 atggcgaaat ggtgtttggc acatcatcgg gaaaacttcc tttacacgca tttcgacgaa
     3721 atctgcgaaa ttatgaaggc gtatgacgta tcgttcagcc tcggcgacgg tttgcgtccc
     3781 ggctgcattg ccgatgccaa cgacgaatcc caattcgccg agctgcacac cttgggcgaa
     3841 ttgacctcca aagcgtggaa acacgacgta caggtgatga tcgaaggtcc cggccatgtg
     3901 ccgctgcaac gcgtcaaaga aaatatgacc gaagagttgc aacactgttt tgaagcaccg
     3961 ttttacaccc tcggcccgct cgttaccgac atcgcccccg gctacgacca catcacctcg
     4021 ggcataggcg ctgccaatat cggctggtac ggcacggcga tgctctgtta cgttaccccc
     4081 aaagaacatt tgggactgcc cgacaaagaa gacgtgcgta ccggcatcat cacctacaaa
     4141 ctcgccgccc acgccgccga cctcgccaaa ggctggccgg gcgcacagtt gcgcgacaac
     4201 gccctgagca aggcgcgttt cgagttccgc tggcgcgacc agttccgcct aagcctcgac
     4261 cccgaacgcg ccgaaagctt ccacgacgaa accctgcccg ccgaaggcgc gaaaatcgcc
     4321 cacttctgtt cgatgtgcgg ccccaaattc tgctcgatga aaatcacgca ggaagtgcgc
     4381 gactacgccg acaagcaaaa agcccaacgg cagggcatgg aggaaaaagc ggtcgagttc
     4441 gtcaaaaaag gagcgaagat ttacagctaa aacgtcaagc aaaaaatgcc gtctgaaacc
     4501 cggaaaaaag gcttcagacg gtattctttc gcttgtgaaa
//
LOCUS       DAWGKF010000152         4533 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.152, whole genome shotgun sequence.
ACCESSION   DAWGKF010000152 DAWGKF010000000
VERSION     DAWGKF010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4533)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4533)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4533
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.152"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(238..345)
                     /locus_tag="WHR07_001747"
                     /pseudo
     CDS             complement(238..345)
                     /locus_tag="WHR07_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(391..1119)
                     /gene="pdxJ"
                     /locus_tag="WHR07_001748"
     CDS             complement(391..1119)
                     /gene="pdxJ"
                     /locus_tag="WHR07_001748"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEZ2130936.1"
                     /translation="MLLGVNIDHIATVRNARGTTYPSPVEAALVAETHGADLITMHLR
                     EDRRHIKDADVFAVKNAIRTRLNLEMALTEEMLENALKVMPEDVCIVPEKRQEITTEG
                     GLDVLAQQEKIAGFTKILTDAGIRVSLFIDADDRQIQAAYDVGAPVVELHTGAYADAR
                     SHAEQLKQFERLQNGAHFAGDLGLVVNAGHGLTIHNVTPIAQILAIRELNIGHSLIAQ
                     ALFLGLPEAVRQMKEAMFRARLLP"
     gene            complement(1143..1934)
                     /gene="recO"
                     /locus_tag="WHR07_001749"
     CDS             complement(1143..1934)
                     /gene="recO"
                     /locus_tag="WHR07_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HEZ2130937.1"
                     /translation="MSEHRVNHEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSAR
                     KRQSELRGVLVPFVPVSASWYGSQELKTLHRAEWIGGWPQPQGRALFSGLYVNELMLK
                     LTVREDPLPELYDALAEVMEAVCCKAAYIDDLRRFEWRLLNLLGVAPDLHADGTGGDI
                     LADKTYRLMPEEAVMPVCEDADALSHEAGAIVEGQSLIDLREGSFRTAESLQQALKIT
                     RLFIRHLLPEGLKSRQVLEQIRQFDRKETARETVPTSDGTASNAV"
     gene            complement(1968..3095)
                     /gene="pheA"
                     /locus_tag="WHR07_001750"
     CDS             complement(1968..3095)
                     /gene="pheA"
                     /locus_tag="WHR07_001750"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HEZ2130938.1"
                     /translation="MLECTINYCSGEIMSQTIDELLLPHRNAIDTIDAEILRLLNERA
                     QHAHAIGELKGTGAVYRPEREVAVLRRIQDLNKGPLPDESVARLFREVMSECLAVERP
                     LTIAYLGPQGTFTQQAAIKHFGHAAHTMACPTIDNCFKQVETRQADYLVAPVENSTEG
                     SVGRTLDLLAVTALQACGEVVLRIHHNLLRKNNGSTEGIAKVFSHAQALAQCNDWLGR
                     HLPNAERIAVSSNAEAARLVAESDDGTVAAIAGRTAAEIYGLDMVAECIEDEPNNTTR
                     FLVMGHHETGASGSDKTSLAVSAPNRAGAVASLLQPLTESGISMTKFESRPSKSVLWE
                     YLFFIDIEGHRRDAQIQTALERLGERASFVKVIGSYPTAVL"
     gene            complement(3134..4366)
                     /locus_tag="WHR07_001751"
     CDS             complement(3134..4366)
                     /locus_tag="WHR07_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HEZ2130939.1"
                     /translation="MPSAHYPEMSEKLMAVLMAMLVTLMPFSIDAYLPAIPEMAQSLN
                     ADVHRIEQSLSLFMFGTAFGQVVGGSVSDIKGRKPVALTGLTVYCLAVAAIVFASSAE
                     QLLNLRVVQAFGAGMTVVIVGAMVRDYYSGRKAAQMFALIGIILMVVPLVASMVGALL
                     QGLGGWQAIFVFLAAYSLVLLGLVQHFLPKPAVGGKIGRDVFGLVAGRFKRVLKTRAA
                     MGYLFFQAFSFGSMFAFLTESSFVYQQLYRVTPHQYAWAFALNIITMMFFNRITAWRL
                     KIGVHPQSILLWGIVVQFAANLSQLAAVLFFGLPPFWLLVACVMFSVGTQGLVGANTQ
                     ACFMSYFKEEGGSANAVLGVFQSLIGAGVGMAATFLHDGSATVMAATMTASTSCGIAL
                     LWLCSHRAWKENGQSEYL"
BASE COUNT         1014 a         1306 c         1242 g          971 t
ORIGIN      
        1 acataatcat cgcctcaata tttaatatcc caaaatatag atttaaaacc atcgcctttg
       61 tggtttgtca gcattcctaa ttgagataga aagtcaaata atttcttgtt tctccggctg
      121 ccatcaagat ggtttagatt aagacctcga acaatacaat acccaatact ctgtactgta
      181 ttgtgaattt cttctatcaa actattattg tttgcagata aaatatactt ttgattcata
      241 tagtgaatta aatttaaacc agtacggcgt tggcttgcct tgccgtacta tttgtactgt
      301 ctgcggcttc gccgccttgt cctgatttaa atttaatcca ctataacata tccctgtcgt
      361 gaaatgctgt ctgaaagggt ttgcctgccc ttacggcagc agccttgccc tgaacatcgc
      421 ctccttcatt tggcgcacgg cttcgggcag tccgaggaag agggcttggg caatcagcga
      481 atgcccgatg ttcagttcgc ggatggcgag gatttgggcg atgggggtaa cgttgtgtat
      541 ggtcagtccg tgtccggcgt tgacgaccaa gcccaaatcg ccggcaaaat gcgcgccgtt
      601 ttgcagacgc tcgaattgct tgagttgttc ggcgtggctg cgcgcgtcgg catacgcgcc
      661 tgtgtgcagc tcgacaacgg gcgcgccgac atcataggcg gcttggattt gcctgtcgtc
      721 ggcatcgata aagagagaga ctcggatgcc tgcgtcggtc aggattttgg tgaacccggc
      781 gattttttcc tgttgcgcca atacgtccaa gccgccttcg gtcgtgattt cctgacgttt
      841 ttcaggcacg atgcacacgt cttccggcat cactttaagc gcgttttcga gcatttcttc
      901 cgtcaacgcc atttcaaggt tcaggcgcgt gcggatggcg tttttgacgg caaacacatc
      961 cgcgtctttg atgtggcggc ggtcttcgcg caggtgcatg gtaatcaaat ccgcaccgtg
     1021 cgtttcggca accagtgccg cctccacggg gctgggataa gtcgtgccgc gcgcattgcg
     1081 gacggtagcg atgtggtcga tgttgacacc taaaagcata atctttcctt ttatttctgc
     1141 cttcagacgg catttgaagc cgtgccgtcc gaagtcggga cggtttcccg ggcggtttct
     1201 ttgcggtcaa actgccgtat ctgttccaac acctgccgcg atttcagccc ctcgggcaac
     1261 aggtggcgga taaaaagccg tgtgattttc aatgcctgtt gcaggctttc ggcggtgcgg
     1321 aaactgcctt cgcgcaaatc gatcaggctt tgcccttcga caattgcgcc ggcttcgtgc
     1381 gaaagcgcgt ctgcgtcctc gcatacgggc atgaccgcct cttcgggcat cagccggtag
     1441 gttttgtccg ccaaaatatc gccgcccgtg ccgtcggcgt gcaaatcggg ggcaacgccc
     1501 aacaggttca gcagccgcca ctcgaaacgg cgcaagtcgt cgatataagc ggctttgcag
     1561 cacaccgcct ccatcacttc cgccaacgcg tcgtataact cgggcaacgg atcttcgcgg
     1621 acggtcaact tcagcatcaa ctcgttcaca tacaatccgc tgaacaaagc cctaccctgc
     1681 ggctgcggcc acccgcctat ccattcggcg cgatgtaggg tcttcaactc ttgcgaacca
     1741 taccaagacg cactcaccgg cacaaacggc accaacacgc cgcgcaattc gctctgccgt
     1801 ttgcgcgcgc ttcttgccaa aagtgccaca cgcccgtaac ggcggctgaa cgcttcgacc
     1861 cgcaggctgc tttcgcgcca gggcgaggaa gccaacagga agacgggttc gtggttgact
     1921 cggtgttcgg acatcatgcc tgaaatgccg tctgaacgct gccgccgcta caaaacggcg
     1981 gtcgggtacg aaccgatgac tttgacgaac gaagcgcgtt cgcccaagcg ttccaatgcc
     2041 gtctgaatct gcgcgtcccg gcggtgtcct tcgatgtcga tgaagaacag gtattcccac
     2101 aaaacggatt tactcggacg gctctcaaac ttggtcatgg aaatacccga ctcagtcagc
     2161 ggttgcagca gcgaggcaac cgcgcctgcc cggttgggcg cggaaacggc cagcgaagtc
     2221 ttgtcgctgc cgcttgcacc ggtttcgtga tgtcccatca ccaagaagcg cgtggtgttg
     2281 ttcggttcgt cttcgatgca ctcggcaacc atatcgagtc cgtagatttc cgccgccgtg
     2341 cgtccggcga tggcggcaac cgtaccgtcg tccgattcgg caaccagcct tgcggcttcg
     2401 gcattgctgg acacggcaat ccgttcggcg ttgggcaggt gtctgcccaa ccagtcgttg
     2461 cactgcgcca acgcctgcgc gtgggaaaag actttggcaa tgccttcggt gctgccgttg
     2521 tttttacgca aaaggttgtg gtggatgcgc aaaacgactt cgccgcacgc ctgcaacgcg
     2581 gtaacggcaa gcaaatccaa cgtgcgcccg accgagcctt cggtcgagtt ttccacgggc
     2641 gcgaccagat aatccgcctg acgggtttca acctgcttga agcagttgtc tatggtcgga
     2701 cacgccatgg tgtgcgcggc gtgtccgaaa tgcttgatcg ccgcctgctg ggtaaacgtg
     2761 ccctgcggcc ccagataggc gatggtcagc gggcgttcta cggcgaggca ctcgctcatc
     2821 acttcccgaa acaggcgtgc taccgattcg tcgggcagcg ggcctttgtt caaatcctga
     2881 atgcggcgca acacggcgac ttcgcgttcg gggcggtaca ctgcgcccgt gcctttcagc
     2941 tcgccgatgg cgtgggcgtg ttgcgcacgt tcgttgagca ggcgcaggat ttcggcatcg
     3001 atggtgtcga tggcgttgcg gtggggaagg aggagttcgt cgatagtttg ggacataatt
     3061 tcgcctgaac agtaatttat cgtgcattct aacatcaaat gccgtctgaa acggtttcag
     3121 acggcatttt ccgttaaagg tattcgcttt gcccgttttc tttccacgca cgatgcgagc
     3181 agagccacag aagcgcaatg ccgcaagagg tggacgcggt catcgttgcc gccatcacgg
     3241 ttgccgaacc gtcgtgcaag aaggtcgccg ccatacccac ccccgcgccg attaaagatt
     3301 ggaatacacc caatacggcg tttgcgctgc cgccctcttc tttgaaatag gacataaaac
     3361 acgcctgcgt gtttgcaccg accaagccct gcgtaccgac ggaaaacatc acgcacgcga
     3421 ccagcagcca aaacgggggc aacccgaaaa acagcacggc ggcgagttgg gacaggttgg
     3481 cggcaaactg gacgacaatc ccccacagca ggatgctttg cggatgcacg ccgattttga
     3541 gccgccacgc ggtaatgcgg ttgaaaaaca tcatcgtgat gatgttgagt gcaaacgccc
     3601 aagcgtattg atgaggcgta acacggtaga gctgctggta cacgaaggaa gattcggtca
     3661 gaaaggcgaa catcgaaccg aagctgaatg cctgaaaaaa cagataaccc atcgcggcac
     3721 gggttttcaa tacgcgcttg aaccgccccg ccaccagccc gaacacgtcc cgtccgattt
     3781 tgccgccgac ggcaggcttg ggcaggaaat gctgcaccaa accgagcagc accagcgaat
     3841 acgccgccag aaaaacaaaa atcgcctgcc agccacccaa gccctgcaac aatgcgccga
     3901 ccatggatgc gaccagcggc acaaccatca aaatgatgcc gataagggca aacatctggg
     3961 cggctttgcg tccggaataa taatcgcgca ccattgcgcc gacgatgacc acagtcatgc
     4021 ccgcaccgaa tgcctgcacg acgcgcaggt tgaggagctg ttcggcactc gaagcaaata
     4081 cgatggcggc aacggcaagg cagtagacgg tcagtccggt cagcgcgacg ggtttgcgcc
     4141 ctttgatgtc ggacaccgaa ccgccgacca cctgtccgaa cgccgtgccg aacataaaca
     4201 aactcaggct ctgttcgatg cggtggacat ccgcgttcag cgactgcgcc atttcgggaa
     4261 tcgcgggcag gtaggcatcg atggaaaacg gcatcagcgt aaccagcatc gccatcaaaa
     4321 ccgccatcag tttttcgctc atttcaggat aatgggcaga aggcataaat tctcgtccga
     4381 ttcgcaaaca aaccgcccgg cggcggaaaa cacaatacgc ggaaacggaa aattttaaca
     4441 caccggcaca aacaggcggc aacaaaagcc ccggcaaaac cggacgaacc ggaacgatat
     4501 agtggattaa caaaaaccag tacagcgttg cct
//
LOCUS       DAWGKF010000153         4530 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.153, whole genome shotgun sequence.
ACCESSION   DAWGKF010000153 DAWGKF010000000
VERSION     DAWGKF010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4530)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4530)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4530
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.153"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(58..1851)
                     /locus_tag="WHR07_001752"
     CDS             complement(58..1851)
                     /locus_tag="WHR07_001752"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HEZ2130940.1"
                     /translation="MQLDIDRLVAYFGGVNALAEALKQHDPENAATTAAIYKWRTRGS
                     LPLAQLQKLTALAESQGRPLDLNAFLQKNESLERTEMTQANRVIIFDTTLRDGEQSPG
                     AAMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTITKSTVCSLSRAIE
                     RDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDV
                     EFSCEDALRSEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIVKTPNG
                     GKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNGLGERAGNASVEEIVMALKVRH
                     DLFGLETGIDTTQIVPSSKLVSTITGYPVQPNKAIVGANAFLHESGIHQDGVLKHRET
                     YEIMSAESVGWATNRLSLGKLSGRNAFKTKLADLGIELESEEALNAAFARFKELADKK
                     REIFDEDLHALVSDEMGSMNAESYKFISQKISTETGEEPRADIVFSIKGEEKRASATG
                     SGPVDAIFKAIESVAQSGATLQIYSVNAVTQGTESQGETSVRLARGNRVVNGQGADTD
                     VLVATAKAYLSALSKLEFSAAKPKAQGSGTI"
     gene            2097..3206
                     /gene="proB"
                     /locus_tag="WHR07_001753"
     CDS             2097..3206
                     /gene="proB"
                     /locus_tag="WHR07_001753"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HEZ2130941.1"
                     /translation="MKYKRIVFKVGTSSITHSDGSLSRGKIQTITRQLAALHHAGHEL
                     VLVSSGAVAAGFGALGFKKRPVKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILL
                     SRADFADKRRYQNAGGALSVLLQRRAVPIINENDTVSVEELKIGDNDTLSAQVAAMIQ
                     ADLLVLLTDIDGLYTGNPNSNPDAVRLDKIEHINHEIIEMAGGSGSANGTGGMLTKIK
                     AATIAAESGVPVYICSSLKPDALAEAAEHQADGSFFVPRAKGLRTQKQWLAFYSESRG
                     SVYVDEGAEHALSEQGKSLLMSGIAGIEGHFSRMDTVTVYSKATKQPLGKGRVLFGSA
                     AAEDLLKSRKAKGVFIHRDDWISITPEIRLLLTEF"
     gene            3219..4481
                     /locus_tag="WHR07_001754"
     CDS             3219..4481
                     /locus_tag="WHR07_001754"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HEZ2130942.1"
                     /translation="MSNTQKQLALAKAAKKSVNTADTEEKNRALLAMADSLEAAAADI
                     LAANRQDLEAAAGKIPESMTDRLLLDGKRICAMADGIRAVAALPDPVGEILETSTLPN
                     GLEIVKKRVAMGVIGIIYESRPNVTSDAAALALKSGSAVVLRSGKDAFQSARAIVAAL
                     KTGLAQTRIDPDALQLIEDTGREGSYEMMRAKDYLDLLIPRGGAGLIRAVVENAVVPV
                     IETGTGIVHIYVDKDADLEKAIRIVRNAKTSRPSVCNSMEVLLVHEDIAADFLPKLER
                     LLVRDRIEAGLPPVRFRLDPQAARHIGGEAAGADDFDTEFLDYILAVKTVASVEEAVG
                     HIEAHGTHHSDGIVTENRHAADYFTTHIDSAAVYVNASTRFTDGGEFGLGCEMGISTQ
                     KLHARGPMGLKELTSYKYIVQGTGQVRE"
BASE COUNT         1038 a         1241 c         1258 g          993 t
ORIGIN      
        1 gccgcaatgc cgtctgaagc ctttttatgc ttcagacggc atcgtctgtt ttcacgctca
       61 aatcgtaccg ctgccttgcg ctttcggttt ggcggcacta aattccagtt tgctcaaagc
      121 ggaaaggtag gctttggcag tggcaaccaa aacgtcggta tccgcgccct gaccgttgac
      181 gacgcggttg ccgcgtgcca gacggacgct ggtttcgcct tggctttccg taccttgcgt
      241 gacggcgttg acggaataaa tctgcaaagt cgcgccgctt tgcgccacgc tttcaatcgc
      301 tttgaaaatt gcatcaaccg gaccggaacc ggttgcggaa gcgcgttttt cttcgccttt
      361 gatgctgaac acgatgtcgg cgcgcggctc ttcgccggtt tcggtgctga ttttttggga
      421 gatgaatttg tagctctcgg cattcatgct gcccatttcg tcggatacca gtgcgtgcag
      481 gtcttcatcg aagatttcgc gttttttgtc ggcgagttct ttgaagcggg caaacgcggc
      541 gttcagtgcc tcttcgcttt ccaactcgat gcccaaatcc gccagcttgg ttttgaaggc
      601 gttgcggccg gacaatttgc ccaagctcaa acggtttgtt gcccagccga ccgattcggc
      661 ggacataatc tcgtaagttt cgcggtgttt cagcaccccg tcctgatgga tgcccgattc
      721 atgcaaaaag gcattggcac cgacaatggc tttgttgggc tgcacgggat agcccgtaat
      781 ggtggacacc agtttggacg aaggcacgat ttgcgtggta tcgatgccgg tttccaagcc
      841 gaacaagtcg tggcgcactt tcaacgccat cacgatttct tcaaccgaag cattgcctgc
      901 acgttcgccc aagccgttga cagtacattc cacctgacgc gcaccgcctt ttaatgcggc
      961 aagcgaattg gcaaccgcca agcccaaatc gttgtggcag tgtgccgacc aaacgacttt
     1021 gccgccgttg ggcgttttga caatcagttc gcggaaaaat tcttcggttt tgtacgggat
     1081 ggaatagccg acggtatcgg gaatattgat ggtggtcgcg cccgcttcaa ttaccgcgcc
     1141 gcagatttcg gcaaggaaat cgatttccga acgcaacgcg tcttcgcagg aaaattccac
     1201 atcgtcggtg tattcacgag cgattttcac cgctttgacc gccgcctcaa tcacctgctt
     1261 cggcttcatc ttcaatttgt actccatatg gatggggctg gtggcgatga aggtgtggat
     1321 gcgttttttc ggcgcgggcg caacggcctc acccgcctga cggatgtccc gctcgatggc
     1381 acgggacaat gaacagaccg ttgatttggt aatggttttc gcaatcgcat tgaccgcctc
     1441 gaaatcgccc gggctggcag cggcaaaacc cgcttcgatg atgtccacac ccaatttttc
     1501 cagctggcgg gcgacgcgga ttttttcctc tttggtcata gcggcgccgg gcgattgttc
     1561 gccgtcgcgc agggtggtgt cgaaaatgat aacgcggttg gcctgtgtca tttctgttct
     1621 ctccagagat tcgttttttt gtaaaaaagc attcaaatcc agcggcctgc cttgcgattc
     1681 ggcaagcgcg gtcagctttt gcagttgcgc caaaggcagc gacccgcgcg tgcgccattt
     1741 atagatggcg gcggtcgtcg cggcattttc gggatcgtgc tgtttcaacg cttcggcaag
     1801 cgcgttcacg ccgccgaaat aagcaaccaa gcggtctata tctaattgca tggtagtcct
     1861 tgtctaaaat aaatcagcct acagcagaaa tatggacagg attatacgca ttttggacaa
     1921 aacggcaata taaatttgaa aaaatctcaa taaaccgcca tagattttat taattttata
     1981 cattttgtcc attttattgc agacgcggcg tgattgttga caattgcggc agaacagggc
     2041 aaattcggcg gcacaaggtg gcaacgagac aggacaaacc aacaaggacg gaaacaatga
     2101 aatacaaaag aatcgtattt aaagtcggca catcttcgat tacccattcg gacggcagtc
     2161 tctcgcgcgg caaaatccaa accatcaccc gccagcttgc cgcattgcat catgcgggac
     2221 acgagctggt cttggtgtct tccggcgcgg ttgcggcagg gttcggtgcg ctgggtttca
     2281 aaaaacgtcc ggtcaaaatc gccgacaaac aggcttccgc cgccgtcggg caggggctgc
     2341 tgatggaaga atatacggca aacctgtctt cagacggcat cgtgtccgca caaatcctgc
     2401 tcagccgcgc cgactttgcc gacaaacgcc gctaccaaaa tgccggcggc gcactttccg
     2461 tgctgctgca acgccgcgcc gtccccatca tcaatgaaaa cgatacggtt tcggttgagg
     2521 aattgaaaat cggcgacaac gacacattga gtgcgcaagt ggcggcgatg atacaggcag
     2581 acctcttggt gctgctgacc gacatagacg gtctttacac gggcaacccg aacagcaatc
     2641 ccgatgccgt acggctggac aaaatcgaac acatcaacca tgaaatcatc gaaatggcgg
     2701 gcggatcggg ttcggcaaac ggcacgggcg gtatgctgac caaaatcaaa gcggcaacca
     2761 tcgccgccga atccggcgta ccggtgtata tctgttcctc gctcaaaccc gatgcacttg
     2821 ccgaagctgc cgaacatcag gcggacggct cgtttttcgt cccccgtgcc aaaggtttgc
     2881 ggacgcagaa gcaatggctg gcgttctatt ccgaaagccg gggcagcgtt tatgtggacg
     2941 aaggtgcgga acacgctttg tccgaacagg ggaaaagcct gctgatgtcg ggcattgccg
     3001 gaatcgaagg gcatttttcc cgtatggaca ccgtaaccgt gtacagcaag gcaaccaaac
     3061 agcccctggg caaagggcgc gtcctgttcg gttctgccgc cgccgaagac ctgctcaaat
     3121 cgcgtaaggc gaaaggcgtg ttcatccatc gggacgactg gatttccatc acgcccgaaa
     3181 tacgcctgct tctgaccgaa ttttagaaaa ggaaacccat gtcaaacaca caaaaacagc
     3241 ttgcccttgc caaagcggca aaaaaatccg tcaacacggc ggatacggaa gaaaaaaacc
     3301 gcgcgctgct tgctatggcg gacagtctgg aagcggcggc ggcagatatt ttggcggcaa
     3361 accgtcaaga cttggaagcc gcggcaggca aaattcccga aagcatgacc gaccgccttt
     3421 tgttggacgg caaacgcatt tgcgcgatgg cggacggcat tagggcggtt gccgcactgc
     3481 ccgaccccgt gggcgaaata ctggaaacct cgactctgcc caacggcttg gaaatcgtca
     3541 aaaagcgtgt ggcgatgggc gttatcggca ttatttacga aagccgcccg aacgttacgt
     3601 ccgatgcggc ggctttggca ctgaaaagcg gcagcgcggt cgtactccgc agcggcaaag
     3661 atgcattcca atccgcacgc gccatcgttg ccgccctgaa aacggggttg gcacaaaccc
     3721 gcatcgaccc cgacgcgctc cagttgattg aagacaccgg gcgtgagggc agttacgaaa
     3781 tgatgagggc gaaagattat ctagacctgc tgattccgcg cggcggggcg gggctgatac
     3841 gggcggtggt tgagaatgcc gtcgtgccgg tcattgaaac ggggacgggc attgtccaca
     3901 tctacgtcga taaagatgcg gacttagaaa aggcaatccg cattgtccgc aacgccaaaa
     3961 ccagccgtcc gtccgtgtgc aactcgatgg aagtgctgct ggtgcatgaa gacattgctg
     4021 ccgacttcct gcccaagctc gaacggctgt tggttcgcga ccgtatagaa gccggactgc
     4081 cgcccgtccg cttccgtttg gatccgcagg cggcgcggca tatcggcggc gaagcggcgg
     4141 gtgcagacga tttcgatacc gagtttttag actacatcct cgctgtgaaa accgtcgcat
     4201 cggtcgaaga ggcggtcggg cacatcgaag cccacggcac acaccattca gacggcatcg
     4261 ttaccgaaaa ccgccacgct gcggactatt tcacgaccca tatcgattct gccgccgtgt
     4321 atgtcaacgc gtccacgcgc tttaccgacg gcggcgaatt cggcttgggt tgcgaaatgg
     4381 gcatctccac gcaaaaactc cacgcccggg gcccgatggg tttgaaagag ctgacgagtt
     4441 acaaatacat cgtacaaggc acgggacagg ttagggaata atccgaattc aaacgtctga
     4501 tatagtggat taactttaaa ccgatacggc
//
LOCUS       DAWGKF010000154         4522 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.154, whole genome shotgun sequence.
ACCESSION   DAWGKF010000154 DAWGKF010000000
VERSION     DAWGKF010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4522)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4522)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4522
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.154"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..1194
                     /locus_tag="WHR07_001755"
     CDS             <1..1194
                     /locus_tag="WHR07_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T cell/B cell stimulating protein TspB"
                     /protein_id="HEZ2130943.1"
                     /translation="FKEDIQARGYQYDPETDKFVKGYEYSNCLWYEDERRINRTYGCY
                     GVDSSIMRLMSDYSRFPEVKELMESQMYRLARPFWNWHKEELNKLSSLDWNNFVLNRC
                     TFDWNGGDCVVNKGDDYRNGANFSLIRNSKYKEEMDAKKLEEILSLKVDANPDKYIKA
                     TGYPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVVATFGRDSQGNTTVDVQVIPRPDLT
                     PGSAEAPNAQPLPEVSPAENPANNPAPNENPGTRPNPEPDPDLNPDANPDTDGQPGTS
                     PDSPAVPDRPNGRDGKDGGLLCKFFPDILACDRLPEPNPAEDLNLPSETVNVEFKKSG
                     IFQDSAQCPAPVTFTITVLDSSKQFAFSFENACTIAERLRYMLLALAWAVAAFFCIRT
                     VSREV"
     gene            1497..1781
                     /locus_tag="WHR07_001756"
     CDS             1497..1781
                     /locus_tag="WHR07_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2523 domain-containing protein"
                     /protein_id="HEZ2130944.1"
                     /translation="MKLLAALIPLLMSVVGRILTALGLMAVTYSGVDRLVAHFQQAIT
                     HSITGAPQAMLQLFYISGGGTVLNILFGAIAFILSFKQITKLATSIGKKK"
     gene            1782..2969
                     /locus_tag="WHR07_001757"
     CDS             1782..2969
                     /locus_tag="WHR07_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2075 domain-containing protein"
                     /protein_id="HEZ2130945.1"
                     /translation="MAEICLITGTPGSGKTLKMVSMMANDEMFKPDENGIRRKVFTNI
                     KGLKIPHTYIETDAKKLPKSTDEQLSAHDMYEWIKKPENIGSIVIVDEAQDVWPARSA
                     GSKIPENVQWLNTHRHQGIDIFVLTQGSKLLDQNLRTLVRKHYHIASNKMGMRTLLEW
                     KICADDPVKMASSAFSSIYTLDKKVYDLYESAEVHTVNKVKRSKWFYTLPVIILLIPV
                     FVGLSYKMLSSYGKKQEEPAAQESAATEHQAVFQDKTEGEPVNNGNLTADMFVPTLSE
                     KPESKPIYNGVRQVRTFEYIAGCVEGGRTGCTCYSHQGTALKEITKEMCKDYARNGLP
                     FNPYKEESQGRDVQQSEQHHSDRPQVATLGGKPWQNLMYDNWQERGKPFEGIGGGVVG
                     SAN"
     gene            3184..4140
                     /locus_tag="WHR07_001758"
     CDS             3184..4140
                     /locus_tag="WHR07_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEZ2130946.1"
                     /translation="MNIIGLDISKDTIDATLHKTNGSIHYIKFKNNDDGLKQFRLWIK
                     GNRIRKAYIGMEATGIYYEKAADMLSSYYTVYVINPLKIKDYGKSRFNRTKTDKADSN
                     LIADYIKRHQDTLIPYQIPKNKALQKLINLKNQLQQHQKQIKNRLHSTEEDFIRNIHQ
                     DLIDTIQDKMEQVKIAISEQIKKQTDNNHYRNLQTIPSIGKDTASVLYAQLTEKHFKT
                     ANQFVSYAGLSPAIIQSGTSVRGRGRLSRYGNRRLKSTLYMPALCAYRFNAFPKLINN
                     LKKAGKPKMVIIVAIMRKLAKLAYYIVKTGQPYDAERHRLNQ"
BASE COUNT         1479 a         1020 c         1018 g         1005 t
ORIGIN      
        1 ttcaaagaag acatacaggc acgaggctac caatacgacc ccgaaaccga caaatttgta
       61 aaaggctacg aatatagtaa ttgcctttgg tatgaagacg aaagacgtat taatagaacc
      121 tatggctgct acggcgttga cagttcgatt atgcgcctta tgtccgatta cagcagattc
      181 cccgaagtca aagaattgat ggaaagccaa atgtataggc tggcacgtcc gttttggaat
      241 tggcataaag aagaactgaa taaattaagt tctttggatt ggaataattt tgttttaaat
      301 cgttgcacat ttgattggaa cggcggagat tgtgtggtca ataaaggtga tgattacaga
      361 aatggggcta atttttccct tattcgcaat tcaaaataca aagaagaaat ggatgccaaa
      421 aagctggaag agattttatc gttgaaagtc gatgccaatc ccgacaaata cataaaggca
      481 accggatatc ccggttattc cgaaaaagta gaagtcgcac ccggaacaaa agtgaatatg
      541 ggacccgtca cggacaggaa cgggaatccc gttcaggttg tcgcaacatt cggcagggat
      601 tcgcaaggca acaccacagt ggatgttcaa gtaattccgc gtcccgactt aacccccgga
      661 agcgcggaag cgccgaacgc acagccgctg cccgaagtat cgcccgctga aaaccccgca
      721 aacaacccgg cccccaatga gaaccccggc acgcgtccca atcccgaacc cgaccccgat
      781 ttgaatcccg atgcaaatcc cgatacggac ggacagcccg gaacaagccc cgattccccg
      841 gccgttccgg accgcccaaa cggcagggac ggcaaagatg gcgggctttt gtgcaaattc
      901 ttccccgaca ttctagcttg cgacaggctg cccgagccca atccggcaga agatttaaat
      961 ctgccgtctg aaaccgtcaa tgtagagttt aagaaatccg gaatctttca agattccgca
     1021 cagtgtcccg cccccgttac gttcactata accgtgcttg attcaagcaa gcagttcgcg
     1081 ttcagctttg agaacgcatg taccatagcc gaacggctaa ggtacatgct tctcgccctt
     1141 gcttgggcgg ttgccgcctt tttttgtatc cgcacagtat cccgtgaagt ctagcaggcg
     1201 cagcaccgcc gggcttcagt aacttgtgcc aaggcagggg gaggacgtcc agaaagattt
     1261 gtaaagacgg ctttatcgtc tttataaatc tttttggata ccccttgccg ccccgccaaa
     1321 agaacacact ctgctgcaag ggcaggtggt aaggcgcgcg ctttttgcgc cgtccccctg
     1381 cccccgcagc gtcgcaagtg agactggggg tgtgggggct agtccccgca aaatctttca
     1441 gattaagaaa cattttttta atgaggcaac cgtgcctttt aagaaaggga tagcaaatga
     1501 aattgttggc cgcattgatt ccgctcttga tgagcgtcgt aggccgtata ttgactgcat
     1561 tgggattgat ggccgtgacc tattcggggg tggatagatt ggtagcccat tttcaacagg
     1621 cgataaccca tagcataacg ggcgcacctc aagcaatgtt acagcttttc tatataagcg
     1681 gcggtggtac tgttctaaac attcttttcg gcgcgatcgc ctttattctg tcattcaaac
     1741 aaataacaaa actagcaacc tcaatcggga agaaaaaata aatggcagag atctgtttga
     1801 taaccggcac gcccggttca gggaaaacat taaaaatggt ttccatgatg gcaaacgatg
     1861 aaatgtttaa gccggatgaa aacggcatac gccgtaaagt atttacgaac atcaaaggct
     1921 tgaagatacc gcacacctac atagaaacgg acgcgaaaaa gctgccgaaa tcgacagatg
     1981 agcagctttc ggcgcatgat atgtacgaat ggataaagaa gcccgaaaat atcgggtcta
     2041 ttgtcattgt agatgaagct caagacgtat ggccggcacg ctcggcaggt tcaaaaatcc
     2101 ctgaaaatgt ccaatggctg aatacgcaca gacatcaggg cattgatata tttgttttga
     2161 ctcaaggctc taagcttcta gatcaaaatc ttagaacgct tgtacggaaa cattaccaca
     2221 tcgcttcaaa caagatgggt atgcgtacgc ttttagaatg gaaaatatgc gcggacgatc
     2281 ccgtaaaaat ggcatcaagc gcattctcca gtatctatac actggataaa aaagtttatg
     2341 acttgtacga atcagcggaa gttcataccg taaataaggt caagcggtca aaatggtttt
     2401 atactctgcc agtaataata ttgctgattc ccgtttttgt cggcctgtcc tataaaatgt
     2461 taagtagtta tggaaaaaaa caggaagaac ccgcagcaca agaatcggcg gcaacagaac
     2521 atcaggcagt atttcaggat aaaacagaag gcgagccggt aaacaacggt aaccttaccg
     2581 cagatatgtt tgttccgaca ttgtccgaaa aacccgaaag caagccgatt tataacggtg
     2641 taaggcaggt aagaaccttt gaatatatag caggctgtgt agaaggcgga agaaccggat
     2701 gcacatgcta ttcgcatcaa gggacggcat tgaaagaaat tacaaaggaa atgtgcaagg
     2761 attacgcaag aaacggattg ccgtttaacc catataaaga agaaagccaa gggcgggatg
     2821 tccagcaaag tgagcagcac cattcggaca gaccgcaagt tgccacgttg ggcggaaagc
     2881 cgtggcaaaa tcttatgtat gataattggc aggagcgcgg aaaaccgttt gaaggaatcg
     2941 gcgggggcgt ggtcggatcg gcaaactgaa gaaaacggca agagagaaaa aagacccgta
     3001 aaccgtttga atatagacgg cttacgggtc tttgtttcgc gcaaagcaag ggctaaggca
     3061 gtcaggcagc aaatcccgca atgtattaaa acagacgcgt agaaatgccg gctgccttta
     3121 tccatcctca aaattgaata tcatcctagc cgtatcaagg ctgtataaat aaggaaaata
     3181 ccaatgaata taatcgggct ggacatctca aaggatacca tagacgcaac attgcataaa
     3241 acaaacggaa gtatccatta cattaaattt aagaataatg atgatggatt aaaacagttt
     3301 agattgtgga taaagggaaa cagaatcaga aaagcctata tcggcatgga ggcaacaggc
     3361 atctattacg aaaaggcagc agatatgctt tcttcctact ataccgttta cgttatcaat
     3421 cccttaaaaa tcaaggacta cgggaaaagc aggtttaacc gtaccaaaac cgacaaagca
     3481 gattcaaacc tgatagcaga ttacataaaa aggcatcaag atacattgat accgtatcag
     3541 atacccaaaa acaaagcact gcaaaaactg attaacctta aaaatcaatt acagcaacat
     3601 cagaagcaaa ttaaaaaccg tcttcatagc actgaagaag acttcataag gaacatacat
     3661 caagacttga tagataccat acaggacaag atggaacagg taaaaatagc catatccgaa
     3721 caaatcaaaa aacaaacgga taataaccat taccgcaatc ttcaaaccat cccgagcata
     3781 ggcaaagaca ccgcatcagt tctttatgcg caacttacag aaaaacattt taaaaccgca
     3841 aaccagtttg tatcctatgc cggattaagt cccgccatca tacaatcagg gacaagcgta
     3901 agaggtcggg gcagattgag ccgatacgga aacagacgat taaaaagtac gctgtatatg
     3961 cccgcccttt gtgcttaccg ttttaacgca tttccgaaat taataaataa tctgaaaaaa
     4021 gcgggtaagc caaagatggt aatcatcgtt gccatcatgc gcaaactggc gaagctcgcc
     4081 tattacattg ttaaaaccgg ccagccttac gatgcggaaa gacaccgatt gaatcaataa
     4141 aattcaacaa aattaaacgg ttacgcgaat atatttgtgt aaccgtgcat ttgcatatcg
     4201 taaataaacg taaataaaaa taacaatata aatcagtata ttgcaacttt gttttttatt
     4261 ttgtgttgac gggcaacata tcatctgcgc gggaatgacg aatccatccg cacggaaacc
     4321 tgcaccacgt cattcccacg aacctacatc ccatcattcc cacaaggaca gaaaaccaaa
     4381 aacagaaacc taaaatcccg tcattcccgc ctgcgcggga atgacggctg cagatgcccg
     4441 acggtcttta tagcggatta acaaaaatca ggacaaggcg acgaagcctc agacagtaca
     4501 gatagtacgg aaccgattca ct
//
LOCUS       DAWGKF010000155         4512 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.155, whole genome shotgun sequence.
ACCESSION   DAWGKF010000155 DAWGKF010000000
VERSION     DAWGKF010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4512)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4512)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4512
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.155"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(1006..1776)
                     /gene="xth"
                     /locus_tag="WHR07_001759"
     CDS             complement(1006..1776)
                     /gene="xth"
                     /locus_tag="WHR07_001759"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEZ2130947.1"
                     /translation="MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPA
                     AALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGGVRVI
                     NVYCVNGEALDSPKFKYKEQWFAALTEFVRDEMARHGKLVLLGDFNIAPADADCYDPE
                     KWYEKIHCSTVERQWFQNLLDLGLTDSLRHIHPEGAFYTWFDYRGAMFQRKLGLRIDH
                     ILVTSEMAAVLKDVRVDLDTRALERPSDHAPVTAEFDW"
     gene            complement(1836..2117)
                     /locus_tag="WHR07_001760"
     CDS             complement(1836..2117)
                     /locus_tag="WHR07_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEZ2130948.1"
                     /translation="MNTIPLHTILKLMAHPERMAILIQLLDSERNIAELAKSLSLPAT
                     AVSGHLSRLRVEGLVDFTRYHRIIEYRLISEDAATILRTIRDLENKRAV"
     gene            2174..2452
                     /locus_tag="WHR07_001761"
     CDS             2174..2452
                     /locus_tag="WHR07_001761"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130949.1"
                     /translation="MIVIIFINLIINQIFMDDCTGLYVPFPTFFANTRKGGLSDGIKL
                     PPLPCLTLLPNGIIRIVQKMPYNRRTSCPADASVPSGKQNTCLKCCFF"
     gene            complement(2585..3466)
                     /gene="nadC"
                     /locus_tag="WHR07_001762"
     CDS             complement(2585..3466)
                     /gene="nadC"
                     /locus_tag="WHR07_001762"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HEZ2130950.1"
                     /translation="MPSENTLFPLPDTLLRPMVEQALSEDLGRRGDITSAAVIAPDKT
                     AKLFLVSREDGVIAGMDLARLAFQTMDPSVRFQAEIRDGQVVRAGQTLAAVEGNARAL
                     LAAERTALNYLTHLSGISTATARAVAEVAKYGTDIVCSRKTIPLLRVLQKYAVRAGGG
                     VNHRMGLDDAVLIKDNHLAYCDSIAQAVRQAKQAVGPLTCVEIEVDTLAQLDEAIAAG
                     AERILLDNMDDETLKEAANRCHTQTAHPHTVYCEASGGIGFDRLKRVAQTGVDGIALG
                     YLTHSSRSLDIGLDFLA"
     gene            complement(3541..4479)
                     /locus_tag="WHR07_001763"
     CDS             complement(3541..4479)
                     /locus_tag="WHR07_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130951.1"
                     /translation="MDAYPEAEAPPQSIVELVPVLIAVTDGGLRVLTVAQGTLLPNGP
                     LSPLRNSLQAGVKLWVAKQTSQPMGYVEQLYTFVDTHRRNEHGMPVLYVSYLGLVREA
                     ADSILHPDAKWQDCYGYFPWEDLRTDGGQRDAVVGRLRIWANSADTEEVRQKRLKRIH
                     LCWGVEPENWSEEYVLQRYEMLYESGLIEEAAEPQANFDFALTGQPMRHDHRRVLATA
                     LSRLRAKIKYRPVIFELMPPEFTLLQLQNSVEAISGRLLHKQNFRRQIQQQNLIEPSD
                     TGVSGSKGRPAQLCRFRDDVLPDRLISDIGLPLGSR"
BASE COUNT         1040 a         1128 c         1200 g         1144 t
ORIGIN      
        1 atagtggatt aacaaaaatc aggacaaggc gacgaagccg cagacagtac aaatagtacg
       61 gcaacgctgt actggtttaa atttaatcca ctatattttg taatagctgc cattatgcct
      121 actaggatat ataccttcta tataatcctt atttaaataa aaacccttat aaaaatctgt
      181 gttatctgtc gggattgaaa aaaagatttt atctttctca tcaggtttat atttgctatc
      241 aatatcaaaa agagaataag gattacaatg agttcgacat actaggtaaa aatttatatc
      301 ttggatcatg aaatattcga tatttatcag gatcgaaaga tgctaaaaat tcatcaatat
      361 tggtactgga tattttgtca tcactaataa acatcgctag agatgggcga ctttgatttt
      421 ccatttgttg attagtaaag gatataaata ctaacttgcc attgtcaaac cacatagatt
      481 tatatagtgg attaaattta aaccagtacg tcgttgcctc gccttgccgt actatttgta
      541 ctgtctgcgg cttcgtcgcc ttgtcctgat ttttgttaat ccactatagt tattgccttt
      601 gggagaatca attctgacag cacataacat aggttcatct ttacagtcgt tatattgggt
      661 ttcatcaaac tcaactgcat agcacaataa aggcaatagg aaaaaaagga gattaattta
      721 ttactataca taaggcagcc tgactattca ttctaaaata aatccggttt ttaatatttg
      781 attctgctcc ggattatata cataataaat tttactgctc caaaatctga tattaaccct
      841 atggatttca taaatttttc agaaaaatag gctgtgcttg aacaatccgc cgactccggc
      901 tgtttgtcag ggaaaaggca attattttcg gttagtcagc agcctatcct attgaatcac
      961 ttaaagatat ggatgtttgt caacgccata tcaaaacacg gtcttttacc aatcgaattc
     1021 tgccgtcacc ggcgcgtggt cgctcggacg ctctaaagcg cgtgtatcca aatcgacacg
     1081 gacatccttc aaaacggccg ccatttcgga tgtaaccaat atatggtcga tacgcaggcc
     1141 cagtttgcgc tggaacatcg cgccgcgata gtcgaaccat gtgtaaaacg caccttcggg
     1201 atggatatgg cgcaaactgt cggtcaatcc caaatccagc aggttttgaa accactgccg
     1261 ttcgacggtc gaacagtgga ttttttcata ccatttttca gggtcgtaac agtccgcatc
     1321 ggcaggcgcg atattgaaat cgcccaacag caccagtttg ccgtggcgtg ccatttcatc
     1381 gcggacaaat tcggttaacg cggcaaacca ttgttcttta tatttgaatt tcgggctgtc
     1441 gagggcttcg ccgttgacgc aatagacatt gatgacgcgc acgccgccga cggttgccgc
     1501 aatcacgcgc cgttgcggat cgtccggcag cgcgggcagc ccgatatgca cgtcttccgg
     1561 cgcgttgcgg ctgacgattg ccacgccgtt gtaggttttc tgcccgctcc aaacacagtg
     1621 ccagcccatc atctgcaagg cggcagccgg aaatttgtcc tgatcgagtt tgagttcctg
     1681 caaaaccaaa atatcgggcg gattgtcggc aagcaggttt tgcacctgcg gcagccgcac
     1741 attgagcgaa ttgacgttcc aagtggtgat tttcataaca tttccgaaaa atgccgtctg
     1801 aaacgttcag acggcaaaag gaaaggattt taacactata ccgcgcgttt gttttccaaa
     1861 tcgcggattg tccgcagaat cgttgccgcg tcttcggaaa tcaggcggta ttcgataatg
     1921 cggtggtaac gcgtaaagtc caccagacct tccacgcgca gtcggctcaa atggccggaa
     1981 acggcggtgg ccggcaggga taaggatttt gccagttcgg cgatattgcg ttcgctgtcc
     2041 aacagttgga tcagtatcgc catacgttcg ggatgcgcca taagtttgag tatggtgtgg
     2101 agcggtattg tgttcatcgg tattcctaaa acctttgccg cccgccaagc ggattgacgg
     2161 gcgacagata tggatgattg tgattatctt tataaatctt attataaatc aaatatttat
     2221 ggatgattgt acaggattgt atgttccttt tcccactttt tttgcaaaca cgcgtaaagg
     2281 cgggctttca gacggcataa aactgccgcc cctaccctgc ctcaccctgt tgccgaacgg
     2341 aatcatccgc attgttcaaa agatgcctta caaccgccgc acgtcttgcc ctgccgatgc
     2401 ctccgtgcct tcgggcaaac aaaatacctg cctgaaatgc tgttttttct aaagcatcac
     2461 gaccttcacg aaaaatgccg tctgaagaat ctttcagacg gcatttcctc cttgaggcaa
     2521 taaccggatt acggttaggc ggttccttgt ctgacatatc agacaactgc cgacacccta
     2581 aaactcatgc caagaaatcc aaacctatgt ccaacgagcg gctgctgtgg gtcagatagc
     2641 cgagggcgat gccgtccacg ccggtttgcg ccacgcgctt caggcggtcg aagccgatgc
     2701 cgcccgatgc ttcgcaatag acggtgtggg ggtgggcggt ttgcgtgtgg cagcggtttg
     2761 ccgcttcttt cagggtttcg tcgtccatgt tgtccagcaa aatccgttcc gcgcccgctg
     2821 cgatggcttc gtccagttgt gccaacgtgt ccacttcgat ttctacgcag gtcaacggtc
     2881 cgaccgcctg ttttgcctgc cgaacggctt gggcgatgct gtcgcaatag gcgaggtggt
     2941 tgtctttgat gagtacggca tcgtccaaac ccatgcggtg gttcacgccg ccgcccgccc
     3001 tgacggcgta tttttgcagg acgcgcagca gggggatggt tttgcggctg cacacgatgt
     3061 ctgtaccgta tttggcgact tcggcaacgg cacgcgcggt ggcggtggag atgccgctca
     3121 agtgcgtgag gtagttgagc gcggtgcgtt cggcggcgag cagcgcgcgg gcgttgcctt
     3181 cgacggcggc aagcgtctga cctgcgcgga cgacttgccc gtctcggatt tcggcttgga
     3241 agcggacgga cggatccatc gtctgaaagg cgaggcgcgc caagtccatg ccggcgataa
     3301 caccgtcttc gcggctgacg aggaaaagtt tggcggtttt atcgggcgcg atgacggcgg
     3361 cggacgtaat gtcgccgcgc ctgcccaaat cttcgctcaa ggcttgttcc accatggggc
     3421 gcaacagggt gtcgggcagt gggaagaggg tgttttcaga cggcatgggg tttcctttgt
     3481 tgaaaaagat tgatgttgca ccgatgggca aaacttcgtt tgatgtcgtc tgaaaacggg
     3541 ctaacggctg cccagcggca atccgatgtc cgaaatcagc ctgtcgggca ggacgtcgtc
     3601 gcggaagcgg caaagctgcg cgggacggcc tttgctgccc gatacgccgg tatccgacgg
     3661 ctcgataagg ttttgctgct gaatctggcg gcggaagttt tgcttgtgca gcaatctgcc
     3721 gctgatggct tcgacgctgt tttgcagttg cagcaacgtg aattcgggcg gcatcagttc
     3781 gaaaatcacg gggcggtatt tgattttggc gcgcaggcgg gacagggcgg tcgccagtac
     3841 gcggcggtgg tcgtggcgca tgggctgccc cgtaagcgcg aagtcgaagt ttgcctgcgg
     3901 ctcggcggct tcctctatca ggccgctttc atacaacatt tcatagcgtt gcaaaacgta
     3961 ttcttccgac cagttttccg gttcgacgcc ccaacacaaa tgaatgcgct tgagccgctt
     4021 ttggcggact tcctccgtgt ccgccgagtt tgcccaaatg cgcaggcggc cgacgacggc
     4081 gtcgcgctgc ccgccgtcgg tgcgcaagtc ttcccacggg aaatagccgt agcagtcctg
     4141 ccatttcgca tcgggatgca ggatgctgtc ggctgcctcg cgcaccagcc ccaaatagct
     4201 gacgtacaag acgggcatgc cgtgttcgtt gcggcggtgg gtatcgacaa aggtgtaaag
     4261 ctgttccaca tagcccatag gctgcgaagt ttgcttggca acccacagct tcacgcccgc
     4321 ctgcagggaa ttgcgcagag gggagagcgg gccgttgggc aggagcgtgc cttgggcgac
     4381 ggtcaacacc cgcaggccgc cgtcggtaac ggcaatcaat acgggaacca gctcgacgat
     4441 gctttgcggc ggggcttcgg cttcggggta ggcatccatg ctcggctttc tgcgggtgga
     4501 aaaggcttta tt
//
LOCUS       DAWGKF010000156         4464 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.156, whole genome shotgun sequence.
ACCESSION   DAWGKF010000156 DAWGKF010000000
VERSION     DAWGKF010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4464)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4464)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4464
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.156"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(49..3081)
                     /locus_tag="WHR07_001764"
     CDS             complement(49..3081)
                     /locus_tag="WHR07_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HEZ2130952.1"
                     /translation="MFWIVLIVILLLALAGLFFVRAQSEREWMREVSAWQEKKGEKQA
                     ELPEIKDGMPDFPELALMLFHAVKTAVYWLFVSVVRFCRNYLAHESEPDRPVPPASAN
                     RADVPNASDGYSDSGNGTEEAETEAAEAAEEEAADTEDIATAVIDNRRIPFDRSIAEG
                     LMPSESEISPVRPVFKEITLEEATRALNGAALRETKKRYIDAFEKNETAVPKVRVSDT
                     PMEGLQIIGLDDPVLQRTYSRMFDADKEAFSESADYGFEPYFEKQHPSAFSAVKAENA
                     RNAPFRRHAGQAEAKSPDVSQGQSVSDGTAVRDARRRVSVNLKEPNKATVSAEARISR
                     LIPESRTVVGKRDVEMPSETENVFTETVSSVGYGGPVYDETADIHIEEPAAPDAWVVE
                     PPEVPKVPMPAIDIPPPPPVSEIYNRTYEPPSGFEQAQRSRIAETDHLADDVLNGGWQ
                     EETAAIADDGSEGAAERSSGQYLSETEAFGHDSRAVCPFEDVPSERPSCRVSDTEADE
                     GAFQSEETDAVYEHLPTTDLLLPPLFNPGATQTEEELLENSITIEEKLAEFKVKVKVV
                     DSYSGPVITRYEIEPDVGVRGNSVLNLEKDLARSLGVASIRVVETIPGKTCMGLELPN
                     PKRQMIRLSEIFNSPEFAESKSKLTLALGQDITGQPVVTDLGKAPHLLVAGTTGSGKS
                     VGVNAMILSMLFKAAPEDVRMIMIDPKMLELSIYEGIPHLLAPVVTDMKLAANALNWC
                     VNEMEKRYRLMSFMGVRNLAGFNQKIAEAAARGEKIGNPFSLTPDNPEPLEKLPFIVV
                     VVDEFADLMMTAGKKIEELIARLAQKARAAGIHLILATQRPSVDVITGLIKANIPTRI
                     AFQVSSKIDSRTILDQMGAENLLGQGDMLFLPPGTAYPQRVHGAFASDEEVHRVVEYL
                     KQFGEPDYVDDILSGGGSEELPGIGRSGDGETDPMYDEAVSVVLKTRKASISGVQRTL
                     RIGYNRAARLIDQMEAEGIVSAPEHNGNRTILVPLDNA"
     gene            3246..3926
                     /locus_tag="WHR07_001765"
     CDS             3246..3926
                     /locus_tag="WHR07_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter permease"
                     /protein_id="HEZ2130953.1"
                     /translation="MIFQTVWFSDVVLSVSWIVLILILAASAPSAFRSLARYRSALPL
                     CTVIFSAAWCLNASAGGGQLAQMNYHLLAVNLVALMVGTSAAFWLAALLMLPYCLLFA
                     GSAGAYPPNALVLILPALAVNRLSRMLVNRLPPNIFIFIFVNGFLASAAGILLTGLVL
                     TGILDAANAFPSEILWTTALPVFILLAWAEAFLSGISTAIFVALKPHWINTFDDNRYL
                     KSDRGIWR"
     gene            3955..4314
                     /locus_tag="WHR07_001766"
     CDS             3955..4314
                     /locus_tag="WHR07_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEZ2130954.1"
                     /translation="MLSNIIPLSIGAALGATARWLLNLAVPAAMSPATGNLFANWTGA
                     LLIGIFAETINHPQWKLLLITGFLGSLTTLSGFSLETVTLLQSNRPASALANIFLHTA
                     GSLLLTWLGLKIGAAVK"
BASE COUNT          910 a         1308 c         1132 g         1114 t
ORIGIN      
        1 aaatgccgtc tgaaacagtc ttcagacggc atttccattt gcaaaaaatc aagcattgtc
       61 caaggggacg agaatcgtac ggttgccgtt gtgttccggt gcggacacaa tgccttccgc
      121 ctccatctgg tcaatcagac gcgcggcgcg gttgtagccg atgcgcaagg tgcgctgtac
      181 gcccgaaata ctggctttgc gcgttttcag gacaacggat acggcttcat catacatcgg
      241 atcggtttcg ccgtcgccgc tgcgcccgat gccgggcagc tcttcgctgc cgccgccgct
      301 caaaatatcg tcaacatagt ccggctcgcc aaactgtttc aaatattcga ccacgcggtg
      361 cacctcttca tccgaggcaa acgcgccgtg aacgcgctgc ggataggcag tacccggcgg
      421 caggaacagc atatcgccct gaccgagcag gttttccgcg cccatttggt cgagaatcgt
      481 gcggctgtcg attttgctgg acacttggaa cgcgatacgc gtcgggatgt tcgccttaat
      541 caaccctgta atcacatcga cgctggggcg ttgtgtggca agaatcagat ggatgcctgc
      601 cgcgcgggct ttttgggcga ggcgggcaat cagttcttcg attttcttgc ctgccgtcat
      661 catcaggtcg gcaaactcat caaccacgac cacgataaac ggcaattttt ccaaaggttc
      721 gggattgtcg ggcgtgaggc tgaacgggtt gccgattttc tccccccttg ctgcggcttc
      781 ggcgattttt tgattgaaac ccgcaagatt gcgcacgccc ataaagctca tcaggcggta
      841 gcgtttttcc atttcgttaa cacaccagtt cagcgcgttt gccgccagct tcatatcggt
      901 aacgacaggg gcgagcaggt gcgggatgcc ttcgtaaatg ctcaattcca gcattttcgg
      961 atcgatcata atcatacgca cgtcttccgg cgcggctttg aaaagcatag acagaatcat
     1021 cgcgttgaca cccaccgatt tgcccgaacc ggtcgtgccg gcaaccaaca aatgcggcgc
     1081 ttttcccaag tcggttacga cgggctgtcc ggtgatgtcc tgaccgagcg cgagcgtcag
     1141 cttggatttg gattcggcaa actcgggtga attgaagatt tcgctcaggc gtatcatttg
     1201 gcgtttcggg ttcggaagtt ccaaacccat acaggttttg ccggggatgg tttcgacaac
     1261 gcggatggaa gccacgccga gcgaacgcgc caagtctttt tccagattca gaacggaatt
     1321 gccgcgcacg ccgacatcgg gttcgatttc ataacgcgta atcacggggc cggaataaga
     1381 atcgacaacc ttgaccttga ctttgaactc cgccaatttt tcttcgatgg tgatgctgtt
     1441 ttccaacagt tcttcttcgg tttgcgtcgc cccgggattg aacagcggcg gcagaagcag
     1501 gtcggttgtc ggcaggtgtt cgtataccgc atcggtttct tccgattgga acgccccttc
     1561 atccgcttcc gtatccgata cccggcagga cgggcgttca gacggcacat cttcaaacgg
     1621 acaaaccgcc cgactgtcat gcccgaacgc ttcggtttcc gacagatatt gcccgcttga
     1681 ccgctctgcc gcaccctcac tgccgtcatc cgcaatagcg gcggtttcct cctgccaacc
     1741 tccattcaaa acatcatcgg caagatggtc ggtttcggca atgcggctgc gttgcgcctg
     1801 ctcgaatcct gacggcggtt cataggtacg gttgtagatt tccgatacgg gaggcggcgg
     1861 cggaatatcg attgcgggca tgggaacttt cggcacttcg ggtggttcga ccacccaagc
     1921 atcgggcgcg gcaggttctt caatatggat atcggcagtt tcatcataaa ccggaccgcc
     1981 gtatcccaca gacgaaacgg tttccgtgaa aacattttcg gtttcagacg gcatttcgac
     2041 atcccgtttc ccgacaaccg tccgactttc cggaatcagg cgcgaaatcc gcgcctccgc
     2101 agaaaccgtt gccttgttcg gttctttcaa attgacggaa acgcggcggc gggcatcgcg
     2161 gacggctgtg ccgtctgaaa cggactgtcc ttgggaaaca tccggggatt ttgcctccgc
     2221 ctgccctgca tgacggcgga acggcgcatt ccgtgcattt tcggctttga ctgcagaaaa
     2281 ggcagacgga tgctgcttct caaaatacgg ctcaaatccg taatccgcag actcggaaaa
     2341 cgcttctttg tccgcatcga acatacggga atacgtgcgt tgaagcacag ggtcgtccaa
     2401 accgataatc tgcagccctt ccatcggggt atcggacacg cggactttgg ggaccgctgt
     2461 ttcgtttttc tcaaatgcat cgatatagcg ttttttcgtt tcccttaaag ccgcgccgtt
     2521 taaggcacgc gttgcttctt ccaaagtgat ttccttaaaa accggacgga cgggcgaaat
     2581 ttcgctttca gacggcatca acccttcagc aatactccgg tcgaatggga tgcggcggtt
     2641 gtcgattacg gcagttgcaa tgtcttccgt atcggcagcc tcttcctccg cagcttctgc
     2701 tgcttccgtt tccgcttctt ccgtcccgtt tccactgtct gaatatccgt cggatgcgtt
     2761 cggaacatcc gcacggtttg cagaagcagg cggaacaggc ctatccggtt cggattcgtg
     2821 cgccagatag tttcggcaga aacggacgac actgacgaac agccaataca ctgccgtttt
     2881 gacggcatgg aaaagcatca gggcaagttc gggaaaatcg ggcataccgt ctttgatttc
     2941 aggcagctcc gcctgttttt cccctttctt ttcctgccac gcagaaacct cgcgcatcca
     3001 ctcgcgttcg gattgtgcgc ggacaaaaaa caggccggca agcgcaagca acaaaataac
     3061 gatcaaaact atccaaaaca tatgccgttt cccgcaagac aaacgattaa acgggtttat
     3121 tttaacgtgt ttccatccca aaaaaaacaa ccagccggca attctgccga aaccgattcg
     3181 gctttcggtt tgcccccgcc gacagtataa tagccgtccc ttcccttaat ctttgcggca
     3241 ttgccatgat tttccaaaca gtctggtttt cagatgtggt actgtcggtt tcgtggattg
     3301 tccttatcct gatactggca gcttccgcgc cgtccgcatt ccgctcgctt gcccgctacc
     3361 gttccgccct tccactgtgt accgtaattt tttccgcagc atggtgtctg aacgcctctg
     3421 ccggcggcgg acagcttgcc cagatgaact accatctgct cgccgtcaat ctggttgcac
     3481 tgatggtggg cacttccgcc gccttttggc ttgccgcgct gctgatgctg ccctactgcc
     3541 tgctgtttgc cggttctgcc ggcgcatatc cgccgaacgc tttggtgctg attctgcccg
     3601 cgcttgccgt caaccgcctg tcgcgtatgc tggtcaaccg cctgccgccc aatattttca
     3661 tctttatttt cgtcaacggc tttctcgctt ccgccgccgg cattctgttg accgggctgg
     3721 tgctgaccgg tattttggat gctgcaaacg cttttccgtc cgaaatattg tggacgaccg
     3781 ccctgcccgt ctttattctg ctggcgtggg cggaagcttt tctcagcggc atttcaactg
     3841 ccatatttgt tgcactgaag ccccattgga tcaacacttt cgacgacaac cgctatctga
     3901 agtccgaccg cggcatatgg cggtagcctt cagacggcat agacaggcaa aaccatgctt
     3961 tccaacatca tccccctttc catcggtgcg gcactcggtg caacggcgcg ttggctgctc
     4021 aacctcgccg ttcctgccgc catgtctccc gccacgggca acctgtttgc caactggacg
     4081 ggcgcgctgc tcatcggcat ctttgccgaa accatcaatc acccgcaatg gaagctgctg
     4141 ctgattaccg gttttctcgg cagcctgacc acgctttccg gattttcact ggaaaccgta
     4201 accctgctcc aatcgaatcg tcctgcttca gcacttgcca atattttcct acacacggca
     4261 ggttcgctgc tgctgacttg gctcgggctg aagatagggg cggcagtcaa ataaccgcaa
     4321 caaattgctt cctttggttt tgacacaaac tatacaagtc ctaacatctt aatcatggcg
     4381 cagcatataa gcgtggattt gcagcccaat ctatactttc tgattctatt cattaagcca
     4441 ttatgcttat tcctcaatca cggt
//
LOCUS       DAWGKF010000157         4463 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.157, whole genome shotgun sequence.
ACCESSION   DAWGKF010000157 DAWGKF010000000
VERSION     DAWGKF010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4463)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4463)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4463
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.157"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            88..396
                     /locus_tag="WHR07_001767"
     CDS             88..396
                     /locus_tag="WHR07_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130955.1"
                     /translation="MEAQSEIHINLEVLLNGNSRASIEAQSLMQEQAEEIIDDETVNQ
                     GFSITTQQGEVIQPSDVKLSKSVRIGRYDEANSLLPDSAFTAISEYFLELQSRNLTEQ
                     "
     gene            393..875
                     /locus_tag="WHR07_001768"
     CDS             393..875
                     /locus_tag="WHR07_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130956.1"
                     /translation="MKKYLPLLRFLLIACISAFLAWKGQPFVHGNEKAVDLIINVFAI
                     LAGFLIAIMTLFSDMRFDEDANWRQIQIREGVQEQRYIKHSLLFYTYLAVLVCVFIVI
                     LLAHKEEYKNGPAIFWLERSYLFLACISIFYSVFLPGNLIKSRKEEFKKLMEKKKPKI
                     "
     gene            965..1468
                     /locus_tag="WHR07_001769"
     CDS             965..1468
                     /locus_tag="WHR07_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HEZ2130957.1"
                     /translation="MSDEFNRFIERVLSHEGGYVNHPQDPGGETNWGITKRTAQANGY
                     NGSMRAMTREQAIGIYRKAFWERYRADQMPEAVAFQFFDACVNHGYGNAARMLQRAAG
                     VPDDGIIGEISLKAINSLPENDLLLRFNAERLVFYTKLGTFTSFGKGWVRRVAQNLIH
                     ASADNTD"
     gene            1482..1655
                     /locus_tag="WHR07_001770"
     CDS             1482..1655
                     /locus_tag="WHR07_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130958.1"
                     /translation="MSKKSLIALMTAAMQPDFSHSDLGIRYAMPTQGCWTQAHRKSGV
                     AAAKRAAKKKRRK"
     gene            1580..1918
                     /locus_tag="WHR07_001771"
     CDS             1580..1918
                     /locus_tag="WHR07_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130959.1"
                     /translation="MLDASPPQERGSRRETRSQKKASQITAFFRWLGGLVSNPATGKI
                     SHTKLWTNVAAASMTYKFSQTADAPEWLWWAYGALVGGYALIKRGIAAVPQLAEIKKS
                     ANAEEWSGND"
     gene            1911..2321
                     /locus_tag="WHR07_001772"
     CDS             1911..2321
                     /locus_tag="WHR07_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein tyrosine phosphatase"
                     /protein_id="HEZ2130960.1"
                     /translation="MIEFVRAKKRLLWAFVLLLVWTCGYRYAADKAEAEQTALIATYR
                     HSSMVAAEQYALQLKKAQDERQRWYDFSQKQGRKPVKKQYPPQTKKAGYLKTKEELLA
                     ELACLTAEMAALKKPDALIHGKEVRQKERNSSQG"
     gene            2326..3075
                     /locus_tag="WHR07_001773"
     CDS             2326..3075
                     /locus_tag="WHR07_001773"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HEZ2130961.1"
                     /translation="MPSVELLLEIVGLPRGTFYYQLAVQSAEDKYADLKQHIHDIYRR
                     HKGRYGYRRIAAAILHAGTPVNHKKVSRLMAKTGLKAVIRRRKYRSFKGEVGKIAPNI
                     LRRCFHAEKPNEKWVTDVTEFNVGGEKIYLSPIMDLFNGEIVSYRIQIRPTFDLAGEI
                     LKGAPEKPGSSEKPILHSDQGWQYQMFFYSGLNLNQDKAMKPQTVQIVRQGEATPYWF
                     KFNPLYNNDRIKLKLKGLSLVQYRIQSLKAA"
     gene            complement(3394..3756)
                     /gene="ssrA"
                     /locus_tag="WHR07_001774"
     tmRNA           complement(3394..3756)
                     /gene="ssrA"
                     /locus_tag="WHR07_001774"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(3819..4424)
                     /locus_tag="WHR07_001775"
     CDS             complement(3819..4424)
                     /locus_tag="WHR07_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HEZ2130962.1"
                     /translation="MNTDFQNILKQLGKQAQKEAAEKQAAEKNKQKQEQDFDFSQAVG
                     QLSPLKNRQQYYAPPDKTPIKVRPKDNRADEENYFYIGSTYNDPPASFSKNGQGKNDI
                     QRLKNGYYPVVTDVDLHGYTQEEAQKVLNEFIAFTQKRGVCGEIIHGSGLGSKGYKPV
                     LKNMTRNWLMQHPDVLAYAEPREGNDGCVRILLKRKLRQQD"
BASE COUNT         1185 a          989 c         1104 g         1185 t
ORIGIN      
        1 agactgtatc aagatagccg ttcaaccatt gctaaagcat tagggaaagt tggtagtgta
       61 tttacaagcg aattgagtga tgaggaattg gaagcacaat ccgaaattca tatcaattta
      121 gaagtcttgc taaacggtaa ttcgagagcc agtattgaag cgcaatcgct gatgcaggag
      181 caggcagagg aaattattga tgatgaaacg gttaatcaag gattttccat taccacgcaa
      241 caaggtgaag tgattcagcc ctctgatgta aaactgtcta aatctgttag aataggacga
      301 tacgatgaag ccaactcgtt actccctgac tcggcattta cagcaatcag tgaatatttc
      361 ctagaactcc aaagcagaaa cttaactgaa caatgaaaaa atatctgccc ttactacgtt
      421 ttttgttgat tgcttgtata tcagcatttt tagcatggaa agggcaacct tttgttcatg
      481 ggaacgagaa ggccgttgat ttaattatta acgtatttgc aatcttagcc ggttttttaa
      541 ttgccattat gacattgttt agtgatatga ggtttgatga agatgcaaat tggcgacaaa
      601 ttcaaattcg tgaaggcgta caagaacaac ggtatataaa acattcctta cttttttaca
      661 catatcttgc cgtattagtt tgtgttttta ttgtcatctt gttggctcat aaagaagaat
      721 acaaaaatgg accagccatt ttttggcttg aacggagcta tttattttta gcctgtattt
      781 ccatttttta ttctgtattc ttacctggga atttaattaa aagccgaaaa gaagagttta
      841 aaaaattaat ggaaaagaag aaacccaaaa tctagaacga gttttaaccc cctttaaaat
      901 cccattcaga cgaccttttc taaaatccct gtattgattt ttaattcaat acagggattt
      961 ttccatgtca gacgaattca accgatttat cgaacgcgtc ctctcccacg agggcggtta
     1021 cgtcaaccac cctcaagacc ccggcggcga aaccaattgg ggcatcacta agcgcaccgc
     1081 ccaggcaaac ggctacaacg gctccatgcg tgccatgacg cgtgaacagg ctatcggcat
     1141 ttaccgaaag gcgttttggg agcgttaccg cgccgaccaa atgccggaag cggtcgcgtt
     1201 ccaatttttt gatgcctgcg tcaaccacgg ttacggcaat gccgcccgta tgctccaacg
     1261 cgccgcaggc gtgccggacg atggaatcat cggcgaaatc agcctcaaag ccatcaattc
     1321 cctccccgaa aacgaccttt tattgcggtt caacgccgag cgtctggtct tttataccaa
     1381 gctgggtacg ttcacctctt tcggcaaggg ctgggtacgc cgtgtggcgc aaaacctgat
     1441 tcacgcgtct gcagataaca ctgattaaag ggagacaaac catgtcaaaa aagtcactca
     1501 tcgccctaat gaccgcagcc atgcagcccg atttcagcca cagcgaccta ggcattcgct
     1561 acgccatgcc gactcaggga tgttggacgc aagcccaccg caagagcggg gtagccgccg
     1621 cgaaacgcgc agccaaaaaa aagcgtcgca aataactgcc tttttccgat ggctgggcgg
     1681 cttggtctct aatccggcca cagggaaaat cagccatacc aaactatgga caaacgtggc
     1741 agccgcttct atgacctata agttctctca aacagcagat gcgccggaat ggctctggtg
     1801 ggcttatggc gcattggtcg gcgggtatgc attaatcaaa cgcggcatcg ccgccgtacc
     1861 gcagttggca gaaatcaaaa agtccgcgaa tgcggaagaa tggagcggca atgattgaat
     1921 ttgtccgagc caaaaaacgg ctgctttggg catttgtgct tttgcttgtg tggacgtgcg
     1981 gttaccgata cgccgccgac aaggctgaag cggaacaaac cgccctgatt gccacctatc
     2041 ggcattcttc tatggttgcg gcggaacaat atgccttgca gcttaaaaaa gcgcaggacg
     2101 aaaggcagcg gtggtacgac ttttcccaaa aacaaggaag aaagcccgtg aaaaaacagt
     2161 atccgccgca aacgaaaaaa gccggctatc tgaaaaccaa ggaagaactg cttgcggaat
     2221 tggcttgcct tacagcggaa atggctgccc taaaaaagcc cgatgcctta atccatggga
     2281 aagaagtgcg gcagaaagaa cgcaactcgt cgcagggtta aggcaatgcc atccgttgaa
     2341 ctgctgttgg agattgtcgg actgccacgc ggcaccttct attaccaatt ggccgtccaa
     2401 tcggcagaag acaaatatgc cgatttgaaa cagcatatcc atgatattta tcgacgacat
     2461 aagggaagat acggctaccg gaggattgca gcagccatcc ttcatgcagg aacaccggtc
     2521 aatcacaaga aagtcagccg tctgatggcg aagacggggc tgaaggcagt gatacggcgg
     2581 cgcaaatacc gctcgttcaa aggagaagtc ggcaaaattg cgccgaatat cctgcgacgc
     2641 tgtttccatg cagaaaagcc gaatgagaaa tgggtaacgg acgttaccga gttcaatgta
     2701 ggcggagaaa agatatacct ttctccgatt atggatttgt ttaacgggga aatcgtcagt
     2761 taccgtattc aaatccgccc gactttcgat ttggccggcg agatactgaa aggtgcgccg
     2821 gagaaaccgg gatcgtctga aaagccgata ctgcattcgg atcaaggttg gcaatatcag
     2881 atgttttttt atagtggatt aaatttaaat caggacaagg cgatgaagcc gcagacagta
     2941 caaatagtac ggcaaggcga ggcaacgccg tactggttta aatttaatcc actatacaac
     3001 aacgatagaa tcaagttgaa attaaaaggg ctgagccttg ttcagtacag aattcagtcc
     3061 ctgaaagccg cttgattaaa ctgtccgact ttttggggtc agttcggctt cggcattttt
     3121 ttatccgttt gggggtaact tgtttggaaa gctgcaagct tataaataaa ggattacatt
     3181 taagttttgg gtaacctttt taaaaaaatg cgtgatgact tttgcatttt taaggcgttt
     3241 tttggggtaa ttcgtgaaaa gttaccccaa aagttacccc ataaatggcg aaaactcaag
     3301 catacgccag catattcaag gcaacaaaaa agccttgaaa ctgttgaagt tcaaggcttt
     3361 tttgtgttgc aggatgctgc tgaaaatagg gtatggtgga ggcgggggga atcgaacccc
     3421 cgtccgaaag tcctctacaa agcgttctac atacttagtt gtgtctattt gaaaatctta
     3481 tttccatcat gccgaccaac aggccttttg gaaaccagtt accttaaatc tcatttcctg
     3541 ccaagtaacc cggtaggaaa ccagtcaatg taagatgacg ttgcggtggc tttcgccaca
     3601 cagcccattg accgactgct gcaacggcta gccttaagcg gctaaagcgt aagtttcgtc
     3661 gtttgcgact atttgaattc agtgttttac gggaatctga gaccccggta tgcccgcatc
     3721 tgcttcgcaa cccccgtcga aaccaaggtc gcccccaaaa atggtttgca aattatacgg
     3781 atattgtgcg gtgctgccaa gtctgtcgga gaaatttgtc agtcttgctg ccttaatttg
     3841 cgtttgagca ggatgcggac gcagccgtcg ttgccttccc ggggttcggc gtaggcgagt
     3901 acgtcggggt gttgcatcag ccagtttcgg gtcatatttt tcagaacggg tttgtagcct
     3961 ttggaaccta atccgctgcc gtggatgatt tcgccgcata cgccgcgttt ttgggtgaat
     4021 gcgatgaatt cgttgaggac tttttgggct tcttcctgtg tgtagccgtg caggtcgaca
     4081 tcggtaacga cgggatagta tccgtttttc aggcgttgga tgtcgttttt tccctgtccg
     4141 tttttgctga agctggcggg cgggtcgttg tatgtgctgc cgatgtagaa gtagttttct
     4201 tcgtcggcgc ggttgtcttt gggacggact ttgatggggg ttttgtcggg cggcgcataa
     4261 tattgctgcc ggttttttaa tggggagagt tgtccgactg cttgtgaaaa atcgaaatcc
     4321 tgttcttgtt tttgcttgtt tttttcggct gcctgttttt ctgccgcttc tttttgggct
     4381 tgtttgccca gttgtttgag gatgttttgg aagtcggtat tcatattttt tcctgttatt
     4441 tgtccgatgg ctgtttcggg cgg
//
LOCUS       DAWGKF010000158         4455 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.158, whole genome shotgun sequence.
ACCESSION   DAWGKF010000158 DAWGKF010000000
VERSION     DAWGKF010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4455)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4455)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4455
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.158"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            153..1058
                     /locus_tag="WHR07_001776"
     CDS             153..1058
                     /locus_tag="WHR07_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ2130963.1"
                     /translation="MGKGGDIVVGNGKKYAAPLLVLGCVVFGLGSLIVRSVPVGSYAI
                     AFWRLLISVFVFWFLARFFRQKFPKNRKTVRYALTAGVFLAFDLALWHESIHAVGPGI
                     STLLNSLQIFFLSAIGVFFFGERLSGLKKAGLISAVAGVAMIAGAEFGYNGNAVWGFV
                     SGLVSGLMLALSMVFVRKTHEIETVALFPSMMILSLGGAVSLVVPALLMDGGALYPTT
                     WKDAGLVLVYGVVMQCFAWAMVAYAIPLLSLSLTGLLLLSEPVAALFIDYFGLGKPIE
                     GVQWAGVALTLSAIYLGSLKQQSEP"
     gene            1104..1253
                     /locus_tag="WHR07_001777"
     CDS             1104..1253
                     /locus_tag="WHR07_001777"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130964.1"
                     /translation="MNWQAVKTGKTKHASNGAERKMPSEALSDGIGAGRIKKAASAGM
                     AMQLK"
     gene            complement(1472..2491)
                     /gene="lepB"
                     /locus_tag="WHR07_001778"
     CDS             complement(1472..2491)
                     /gene="lepB"
                     /locus_tag="WHR07_001778"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEZ2130965.1"
                     /translation="MNTMLMSGAAAALLAGIILYFKSDKKRQENGEWSSGLEYAYILT
                     AVGVFAALSLFMSFTAVFLIFVVLCGTAWGVYKYRLKTHPEISESSHFGDYFGSFFPT
                     VLVLFLIRSFIAEPFQIPSSSMRPGLIKGDFILVGKFSYGLRVPVLNNIFIPTGKIER
                     GDVVVFNYPLQPEMTYIKRIVGIPGDVVEYRDKILTVNGKPTSDIPNGTYRYPDDTDP
                     SEIHNTDMFRSGLDGKSFNILKKEGQPAVSLPVLGKYTSDIMSENGYSIEQSGLEHCQ
                     YADDGSGFVCKVPEGRYFAMGDNRDNSADSRYWGFVDDKLVVGKAMFILMNFGDFGRA
                     GTAIR"
     gene            complement(2634..4427)
                     /gene="lepA"
                     /locus_tag="WHR07_001779"
     CDS             complement(2634..4427)
                     /gene="lepA"
                     /locus_tag="WHR07_001779"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HEZ2130966.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLADRFIQYCGGLDLREMSTQVLDSM
                     DIEKERGITIKAQTAALNYKARDGQVYQLNLIDTPGHVDFSYEVSRSLSACEGALLVV
                     DASQGVEAQTVANCYTAIDLGVEVVPVLNKIDLPAADPERVEQEIEDIIGIDAVGAVQ
                     CSAKSGIGVEDVLEEIVAKIPAPTGDENAPLQAVIVDSWFDNYVGVVMLIRVKNGTIK
                     LKDKVRFMSTKAETQVEQLGVFTPKSVQKQELKAGEVGFLITGVKELGQAKVGDTVTL
                     VANPATEPLPGFQEVQSQVFAGLYPVESHDYEALRDALEKLQLNDASLKFEPEVSQAL
                     GFGFRCGFLGLLHLEIVQERLEREFDMDLITTAPTVVYEVVLKSGEKIEVENPSKLPD
                     IGSIETILEPIITATILVPQEYVGNVMTLCNQKRGVQVNMQYMGRQVMLTYDLPMNEV
                     VMDFFDKLKSTSRGYASLDYHFKEFQPSDLIKLDIMVNGEKVDALSLIVHRQSAVHRG
                     RELASKMRELIPRQMFDIAVQAAIGSQIIARENVKALRKNVLAKCYGGDITRKKKLLE
                     KQKAGKRRMKQVGNVEIPQSAFLAILQVSDK"
BASE COUNT          978 a         1127 c         1215 g         1135 t
ORIGIN      
        1 gggttttatc cggcaggacg gttttttgcc ccaacggaaa atagtcggcc tgcccgtaaa
       61 atcagccgtt tgtccgggtg cagccggggc tttgggcttc agacggcata ttttcggaat
      121 ggcggcattc ttgccgtcgg cgcggcagcc gtatggggaa gggaggggat attgtggtcg
      181 gtaacggcaa aaaatatgcc gcaccattgc tggtgctggg ttgcgtggtg ttcggtctgg
      241 gcagtctgat tgtcagatcc gtccccgtcg gttcgtatgc aatcgcattt tggcggttgc
      301 tgatttcggt gttcgtattt tggtttttag cacggttttt caggcaaaaa ttcccaaaaa
      361 acaggaaaac cgtccgatat gccctgacgg cgggcgtgtt tctcgctttc gatttggcgt
      421 tgtggcacga aagcatacac gcggtcgggc cgggtatttc caccctgctc aacagcctgc
      481 aaatcttttt cttgtcggca atcggtgttt tctttttcgg cgagcgtttg agcgggctga
      541 aaaaggcagg cttaatatcg gcagttgccg gcgtggcgat gattgccggt gcggaattcg
      601 gctacaacgg taatgcggtt tggggattcg tcagcggttt ggtatcggga ctgatgctcg
      661 ccctgtcgat ggtgttcgtc cgcaaaaccc atgaaatcga gacggtggcg cttttccctt
      721 caatgatgat tttgagtttg ggcggcgcgg tatcgctggt tgttccggca ttgctgatgg
      781 atggcggcgc gctttatccg acgacttgga aagatgcggg tttggtgctt gtgtacggcg
      841 tggtgatgca gtgcttcgcg tgggcgatgg ttgcctatgc gattccgctg ctttcgctgt
      901 cgctgacggg gctgctgctt ttgtccgaac cggttgccgc cctgttcatc gattatttcg
      961 ggttgggcaa accgattgaa ggcgtgcagt gggcaggggt ggcgctgacg ctttcggcaa
     1021 tttacctcgg ttcgctgaaa cagcagtccg agccttgact ccgtccggca tcagattttc
     1081 tgccgtggca aacctgcgta cgattgaact ggcaggcagt caaaaccggc aagaccaaac
     1141 acgccagcaa cggcgcggag cggaaaatgc cgtctgaagc cctttcagac ggcatcgggg
     1201 cgggcagaat caaaaaagcc gcctccgctg gaatggcaat gcaactaaaa taatgtccgt
     1261 atttccatat gccgcccaca ccgtcagtcg gacgaaatgc cctttattca atgggatggg
     1321 tttccacaca aacggaaata tagtggatta aatttaatcc actatattat ccccgaggct
     1381 gccggcaggg aaacaaggcg tttgatgata aaaatgccgt ctgaaacagg gttcggatgg
     1441 catttttgat gttccggcgt aattttccgg cctaacggat tgccgtaccg gccctgccga
     1501 aatcgccgaa gttcatcaaa atgaacattg ccttgccgac aaccagcttg tcatccacaa
     1561 atccccagta gcgcgaatcg gcactgttgt cgcggttgtc gcccatagcg aaatagcgtc
     1621 cttcgggaac tttgcacacg aaaccgctgc cgtcgtcggc atattggcag tgttccaaac
     1681 cgctttgctc tatggaatat ccgttttcag acataatatc ggaggtatat ttgcccaata
     1741 cgggcaggga aacggccggc tgtccttctt ttttcagaat attgaaggat ttgccgtcca
     1801 aaccgctgcg gaacatatcc gtgttgtgga tttcggaagg gtcggtatcg tcgggataac
     1861 ggtatgtgcc gttaggaata tcggaagtgg gtttgccatt taccgtcaaa atcttatccc
     1921 gatattcgac cacatcgccc ggaatgccga caatacgctt gatgtaggtc atctccggct
     1981 gcagaggata attaaaaaca acgacatcgc cccgttcgat tttgcctgta ggaataaata
     2041 tattgtttaa aacgggtacg cgcaggccgt aggaaaattt gccgaccaaa atgaaatcgc
     2101 ccttaatcag gcccgggcgc atcgagctgg acgggatttg gaacggttcg gcaataaacg
     2161 accggatgag gaacaatacc aaaacggtag ggaagaaact gccgaaataa tcgccgaagt
     2221 ggctgctttc cgagatttcg ggatgagtct tcaggcggta tttgtatacc ccccaagccg
     2281 taccgcacaa tacaacgaaa atcaggaaaa cggcggtaaa gctcataaac agggacaaag
     2341 cggcaaacac gccgaccgcc gtcaggatat aggcgtattc cagaccggaa ctccattcac
     2401 cgttttcctg ccgctttttg tcgcttttga aataaaggat gatgccggca agcagcgcgg
     2461 cagccgcgcc cgacattagc attgtgttca ttgttgttcc ttaatgctta aaaacccgcc
     2521 tgtccgtgca accgttttaa ggcggcaaat tgcaaaattt gtttgcgggc gcgtgcccct
     2581 gaaatcaggg cggtttgagg ggtgttcccg acgcgccgcc ctgtgtgcca gagttatttg
     2641 tcgctcacct gcaaaatcgc caagaacgcg ctttgcggaa tttccacatt gcccacttgt
     2701 ttcatacggc gtttacctgc cttttgtttt tcaagcagtt ttttcttacg cgtaatatcg
     2761 ccgccgtaac atttcgccaa aacgttttta cgcagggctt tgacgttttc gcgggcgata
     2821 atctggctgc cgatggcggc ttggacggcg atgtcgaaca tttggcgcgg aatcagctcg
     2881 cgcatttttg atgccagctc gcggcctcgg tgaaccgcgc tttgacggtg cacaatcagg
     2941 cttaatgcat cgactttttc gccgttgacc ataatatcca gcttaatcaa atcagacggt
     3001 tggaactctt tgaaatggta gtccaacgaa gcataaccgc gcgaagtgga tttgagtttg
     3061 tcaaagaagt ccatgacgac ttcgttcatg ggcaaatcgt aagtcagcat cacttggcgg
     3121 cccatgtact gcatattgac ctgaacgccg cgcttttggt tacacaaagt catgacgttg
     3181 ccgacgtatt cctgcggcac aaggatggtc gcggtaataa tcggctcgag tatggtttcg
     3241 atgctgccga tgtcgggcag tttggacggg ttttcaactt cgattttttc gccgcttttc
     3301 aacacgactt cgtaaaccac cgtcggcgcg gtggtaatca aatccatatc gaactcgcgc
     3361 tccaagcgtt cctgcacgat ttccaagtgc aacagaccca agaagccgca acggaagccg
     3421 aagcccaatg cctgggaaac ttcaggctcg aatttcaacg aagcgtcgtt aagctgcaat
     3481 ttttccaaag cgtcgcgcaa ggcttcgtag tcgtggcttt ccacgggata aagtccggcg
     3541 aatacttggc tttgtacttc ttggaagccg ggcagcggct cagtggcagg gttggcaacc
     3601 agtgtaaccg tatcgccgac tttcgcctga cccaattctt ttacgccggt aatcaaaaag
     3661 cccacttcgc cggctttgag ttcttgtttt tgaaccgatt tcggtgtgaa tacgcccagc
     3721 tgctcgacct gcgtttccgc cttggtgctc ataaagcgca ctttgtcttt cagcttgatg
     3781 gtaccgtttt tcactcgaat cagcatgacc acgccgacgt agttgtcaaa ccacgaatcg
     3841 acaatcacgg cttgcagcgg cgcgttttca tcgccggtcg gcgcaggaat tttggcaacg
     3901 atttcttcca aaacgtcttc cacgccgatg ccgcttttgg cggaacactg caccgcgccg
     3961 accgcatcga tgccgatgat gtcttcaatt tcctgctcca cgcgttcggg gtcggcggcg
     4021 ggcaggtcga ttttgttcaa aacaggcaca acctccacgc ccaaatcaat cgcggtgtaa
     4081 cagttcgcca cggtttgcgc ttccacgccc tgcgacgcgt caacgaccaa aagcgcgcct
     4141 tcgcaggcgg acagcgaacg ggaaacttcg taagagaagt cgacgtgtcc cggcgtgtca
     4201 attaggttga gttgatacac ctgcccatcg cgtgctttgt agttgagcgc ggcggtttgc
     4261 gctttaatgg taatgccgcg ctctttttcg atgtccatgg aatcgagcac ctgcgtactc
     4321 atttcgcgca aatccaagcc gccgcaatat tggatgaagc ggtcggcaag cgtcgatttg
     4381 ccgtggtcga tatgggcaat gatggagaaa tttcggatat ttttcattgg attgttttta
     4441 atgctgaacg gtagg
//
LOCUS       DAWGKF010000159         4445 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.159, whole genome shotgun sequence.
ACCESSION   DAWGKF010000159 DAWGKF010000000
VERSION     DAWGKF010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4445
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.159"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(63..1205)
                     /locus_tag="WHR07_001780"
     CDS             complement(63..1205)
                     /locus_tag="WHR07_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HEZ2130967.1"
                     /translation="MNTLYTLFATCPRGLETVLSQELESLGCTDVQVFDGGVSCRGGL
                     EQVYAANLHSRTAGRILLRLTKGTYRTERDIYKLAKNINWFNWFTLQQTFKVKIEAKR
                     ANVKSLQFVGLTVKDAVCDAFRDIYDARPSVDKAAPDVRIHAFLDERNVEIFIDTSGE
                     ALFKRGYRLDTGEAPLRENLAAGLLLSAGYDGTQPFQDPFCGSGTIAIEAAWIAARRA
                     PGMMRRFGFEKLQNFDKTLWSDLRRRAEAQVKPAFAPISGSDSDRRIIQTALANARSA
                     GVDDIVSFSVADAQSVRPNGVGGIMVSNPPYGVRLEEVRALQALYPQLGTWLKKHYAG
                     WQVGMFTGDREMPKFMRLSPKRKIPLYNGNLDCRLFLIDMVQGSNR"
     gene            complement(1254..1676)
                     /locus_tag="WHR07_001781"
     CDS             complement(1254..1676)
                     /locus_tag="WHR07_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2130968.1"
                     /translation="MNKNRKLLLAALLLIAFAAVKLVLLQWWQAQQPQAVAAQCDLTE
                     GCTLPDGSRVRAAAVSTKKPFDIYIEHAPAGTEQVSISFSMKNMDMGFNRYMFERQPS
                     GTWQAVRIRLPICVEGRRDFTADITIGSRTFQTAFTAE"
     gene            complement(1669..2478)
                     /locus_tag="WHR07_001782"
     CDS             complement(1669..2478)
                     /locus_tag="WHR07_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEZ2130969.1"
                     /translation="MIQDTRPLIRVVAGILLDSDGNYLLSSRPEGKPYAGYWEFAGGK
                     VEAGETDFQALQREFEEELGIRILAATPWLTKIHSYEHARVCLKFLWVNPGQWTGEPQ
                     SREGQEWSWQKAGDFTVAPMLPANGALLRSLSVPRRLYGSLKTGLHGENSMGAYRVLP
                     LGSAEGSGANVLMEAAQWQDRPEHADSVWMMVQTREQWRQAQEKGADVVVWRVCNDVQ
                     AQEAAEALRQGVSVPLVLAANGQTVARYGKLWLGLGAHVVVRDETIGKNHE"
     gene            complement(2560..2937)
                     /locus_tag="WHR07_001783"
     CDS             complement(2560..2937)
                     /locus_tag="WHR07_001783"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEZ2130970.1"
                     /translation="MIYGIGTDIVSLKRIIRLNKKFGQAFAGRILTPEELLEFPQAGK
                     PVNYLAKRFAAKEAFAKAVGTGIRGAVSFRNIGIGHDALGKPEFFYGPALSKWLEEQG
                     ISRVSLSMSDEEDTVLAFVVAEK"
     gene            complement(3137..3904)
                     /locus_tag="WHR07_001784"
     CDS             complement(3137..3904)
                     /locus_tag="WHR07_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013107841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEZ2130971.1"
                     /translation="MQEIMQSIVFVAAAILHGITGMGFPMLGTTALAFNMPLSKVVAL
                     VALPSLLMSLLVLCSNNKKGFWQEIVYYLKTYKLLAIGSVVGSIFGVKLLLILPVSWL
                     LLLMAIITLYYSVNGILNVCAKAKNIQVVANNKNMVLFGFLAGIIGGSTNAMSPILLI
                     FLLSETENKNRIVKSSNLCYLLAKIVQIYMLRDQYWLLNKSEYGLIFLLSVLSVIGLY
                     VGIRLRTKISPNFFKMLIFIVLLVLALKIGHSGLIKL"
     gene            complement(3914..>4445)
                     /locus_tag="WHR07_001785"
     CDS             complement(3914..>4445)
                     /locus_tag="WHR07_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEZ2130972.1"
                     /translation="DITFSEDVGECPLHSDSSFSENPESYLVMYVVKSANDGGNSLFL
                     SSSDIVNQLSKTETGKKHLKTLTGNLYPFKAPASFDKKQGVRWGNILSVNTQMIRFRS
                     DCIYKGIEENRNKVSKEMVLALDYLVKIIKNASDIQEFSAQDDGLIIIDNVNGLHAGT
                     DYTDKNRHYIRARITV"
BASE COUNT         1095 a         1115 c         1085 g         1150 t
ORIGIN      
        1 tcggccggat attaaaaaaa gccgtctgaa catttttcag acggcttttt tgtacacttt
       61 cctcaacggt tcgatccctg caccatatca atcaggaaca ggcggcagtc gaggttgccg
      121 ttataaagcg gaattttccg cttgggcgac aggcgcatga atttgggcat ttccctgtcg
      181 ccggtaaaca taccgacctg ccagccggca tagtgttttt tcaaccacgt ccccaactgc
      241 ggatacagtg cctgcaaagc gcggacttcc tcaaggcgca caccgtaggg cggattggac
      301 accataatgc cgcccacgcc gttcggacgg acggattgcg cgtcggcaac gctgaaggaa
      361 acgatgtcgt ccaccccggc actgcgtgcg ttggccaatg ccgtctgaat gatgcggcgg
      421 tcgctgtcgc tgcccgaaat cggtgcaaaa gccggtttaa cctgcgcttc ggcacggcgg
      481 cgcaaatccg accacagcgt tttatcgaaa ttttgcagtt tttcaaaacc gaaacggcgc
      541 atcatacccg gcgcgcggcg ggcggcaatc caagcggctt cgatagcaat cgtgccgctg
      601 ccgcaaaacg ggtcttgaaa cggctgcgtg ccgtcgtagc ctgccgagag cagcaatccg
      661 gcggcaaggt tttcgcgcag cggggcttcg ccggtatcga gacggtagcc gcgtttgaac
      721 agggcttcgc ccgaagtgtc gatgaagatt tcgacattgc gttcgtccaa aaaggcgtgg
      781 atgcgaacat cgggcgcggc tttgtccacg ctcggacgtg cgtcgtaaat gtcgcggaaa
      841 gcgtcgcaga cggcatcttt gacggtcagt ccgacaaatt ggaggctttt gacgttggca
      901 cgctttgcct cgattttgac tttgaacgtc tgctgcaagg taaaccagtt gaaccagttg
      961 atgtttttgg caagtttgta aatgtcgcgc tcggttcggt atgtgccttt ggtcaggcgt
     1021 agcaggatgc ggccggcggt acgcgagtgc aggttggcgg cgtaaacctg ttccaatccg
     1081 ccccggcagg aaacgccgcc gtcaaacact tgtacatcgg tacagccgag gctttcgagt
     1141 tcttgagata aaacggtctc caagccgcgc gggcaggtgg cgaaaagtgt atataaagta
     1201 ttcataacgt gtcctttccg gacggatgtt ccggcaatgg cggattgaaa ggtttattcg
     1261 gcggtaaatg ccgtctgaaa tgtccgactg ccgattgtaa tgtccgccgt aaaatcgcgc
     1321 ctgccttcga cacagatggg caggcggatg cgtactgcct gccaagtccc cgacggttgc
     1381 cgctcgaaca tatagcggtt gaaacccata tccatatttt tcatactgaa gctgatgctg
     1441 acctgttccg tgccggcggg cgcgtgttcg atataaatat caaacggttt tttggttgaa
     1501 acggcggcgg cgcggacgcg gcttccgtcc ggcagcgtgc aaccctcggt caaatcgcat
     1561 tgcgccgcca cagcttgcgg ctgctgcgcc tgccaccatt gcaacaaaac gagcttgacg
     1621 gcggcaaagg caatcagcag cagtgcggca agcagtaatt tacggttttt attcatgatt
     1681 cttccctatt gtttcatccc ttaccaccac gtgcgccccc aatccgagcc atagttttcc
     1741 ataacgtgca accgtctgtc cgtttgctgc aagtacgagc ggcacggata cgccctgccg
     1801 cagggcttct gccgcctctt gtgcctgaac atcattgcac acgcgccaca cgacaacatc
     1861 cgcgcccttt tcctgcgcct gccgccattg ttcgcgggtc tgcaccatca tccacacgct
     1921 gtcggcgtgt tcgggtctgt cctgccattg cgccgcctcc atcaaaacgt tcgcaccgct
     1981 tccctctgcc gaacccaaag gcaggacgcg gtacgcgccc atactgttct ccccgtgcaa
     2041 acccgttttc aggctgccgt acaaacggcg cggaacggac agcgaacgca aaagcgcgcc
     2101 gttggcgggc agcatggggg caacggtaaa atcacccgcc ttctgccaag accattcctg
     2161 cccttcgcgg gattgcggtt cgcccgtcca ttggccgggg ttgacccata ggaatttcag
     2221 gcagacgcgg gcgtgttcgt aggaatggat tttggtcagc caaggcgtgg cggcaaggat
     2281 gcggatgccg agttcttctt caaactcgcg ttgcaaggct tggaagtcgg tttcgcccgc
     2341 ttcgaccttg ccgccggcaa attcccaata tccggcatag ggtttgcctt cggggcgcga
     2401 gctgagcagg tagttgccgt ctgaatcgag caggatgccg gcaacgacgc ggataagggg
     2461 tcgggtgtct tgaatcatgg cgggtacgcg gttggtcggt cggagtgcaa atgagggacg
     2521 agcaatgccg tcaacgggtt tgccgcattt cagacggcat tatttttcgg caacgacaaa
     2581 cgccaatacg gtgtcttctt cgtcgctcat gctgaggctg acgcggctga tgccttgttc
     2641 ctccagccat ttggacaggg cggggccgta gaaaaattcg ggcttgccca atgcgtcatg
     2701 cccgatgccg atgttgcgga aggaaaccgc gccgcgtatg cccgtgccga cggctttggc
     2761 gaaggcttct ttggcggcaa agcgtttggc gaggtagttg acgggtttgc ccgcttgcgg
     2821 aaattcaagc agctcttccg gagtgaggat gcgcccggca aacgcctgtc cgaatttttt
     2881 gtttaagcgg atgatgcgct tgagggaaac aatgtctgtg ccgatgccgt aaatcatatt
     2941 tgcgctcctt cgcccttggt tgcgggtagt gatgaatgtg atgatgaatg ccgtcaattt
     3001 cttggggcgt taaaatggcg tgaatatcca cttttggggt tttgtcggta acaattttca
     3061 ctgtaacctt ttgcatttga aattctaaaa catcgtgcca attatttaat aaggagttaa
     3121 ggcatttaat aatgaattaa agtttgatta aacccgaatg cccgattttc agagccaata
     3181 ccaataaaac aataaaaatt aacattttaa aaaaatttgg gctaatctta gtccttaacc
     3241 gaattccaac atacaatcca ataacagaca atacggacag taaaaatatt aaaccgtatt
     3301 cactcttatt taataaccaa tactggtctc ttagcatata tatttgaaca attttcgcca
     3361 aaagatagca tagattgctt gattttacga tacgattttt attttctgtt tcgctaagca
     3421 aaaatattaa caatatggga gacatggcat tggttgaacc gccgatgatg cctgccaaaa
     3481 acccaaaaag aaccatattc ttattattgg caactacttg aatatttttt gcttttgcac
     3541 atacatttaa aataccattg acagaataat acaatgtaat gattgccatc agtaaaagca
     3601 gccaagacac tggaagtatc aaaagcaact tcaccccaaa aatgctgcca acgacgctgc
     3661 cgatagcaag caatttatag gtttttaaat aataaacaat ctcttgccaa aaaccttttt
     3721 tgttattgct gcatagaacc aacaagctca ttaacaggct tggtaatgcc accaaggcaa
     3781 caaccttaga caatggcatg ttaaaagcca atgcggttgt accgagcatc ggaaatccca
     3841 tgcctgtaat tccgtgcagt attgcggcag caacaaaaac gatagattgc attatttctt
     3901 gcataaccgt cctttataca gtaattcttg ctctaatata atgcctgttt ttatccgtat
     3961 aatcagttcc ggcatgcaag ccattgacat tgtcaataat aatcaaacca tcatcttgtg
     4021 cagaaaattc ttgaatatca ctcgcatttt ttataatctt tacaagataa tcaagtgcaa
     4081 gtaccatttc ctttgatact ttatttctat tttcttcaat acctttatag atacaatcac
     4141 ttctaaatct aatcatttga gtattgaccg ataagatatt accccatctc acaccttgtt
     4201 ttttatcaaa tgatgctggt gctttaaatg gatataaatt gcccgttaat gtttttaagt
     4261 gttttttacc ggtttctgtt ttagataact gattgacaat atctgatgaa cttaaaaata
     4321 gggaattacc tccatcattg gctgatttta ctacatacat aaccaaataa ctttccgggt
     4381 tttcactaaa agatgaatca ctatgaagtg gacattctcc aacatcttcc gagaaagtta
     4441 tatca
//
LOCUS       DAWGKF010000160         4369 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.160, whole genome shotgun sequence.
ACCESSION   DAWGKF010000160 DAWGKF010000000
VERSION     DAWGKF010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4369)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4369)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4369
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.160"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(35..1414)
                     /gene="norM"
                     /locus_tag="WHR07_001786"
     CDS             complement(35..1414)
                     /gene="norM"
                     /locus_tag="WHR07_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter NorM"
                     /protein_id="HEZ2130973.1"
                     /translation="MLLDLNRFSFSVFLKEVRLLTALALPMLLAQVAQVGIGFIDTVM
                     AGGAGKEDLAAVALGSSAFATVYITFMGIMAALNPMIAQLYGAGKTDEVGETGRQGIW
                     FGLFLGVFGTVLMWAAITPFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYA
                     SSLNRPRLIMLVSFAAFVLNVPLNYIFVYGKFGMPALGGAGCGLATMAVLWFSALALW
                     IYIAKENFFRPFGLTAKFGKPDWAVFKQIWKIGAPIGLSYFLEASAFSFIVFLIAPFG
                     EDYVAAQQVGISLSGILYMIPQSVGSAGTVRIGFSLGRREFSRARYISGVSLVLGWML
                     AVITVLSLVLFRSPLVSMYNNDPAVLSIAATVLLFAGLFQPADFTQCIASYALRGYKV
                     TKVPMFIHAAAFWGCGLLPGYLLAYRFDMGIYGFWTALIASLTIAAIALVWCLELCSR
                     EMVRSHKAV"
     gene            1749..2900
                     /locus_tag="WHR07_001787"
     CDS             1749..2900
                     /locus_tag="WHR07_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEZ2130974.1"
                     /translation="MQTWQLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPL
                     MEYAHSLLTHIDAGLSLKTILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRL
                     CYAGPVLHAQPDGLLNMREPLQAGAEMYGFADIRGDIELIDLMLKSMKIADMGKVLLS
                     LGHIGIFRALSDAAHLDAGQSATLLALMQDKDTGTVEAQVKAWKLDGMWAKAFSLLPR
                     LYGGREVLSDARGRLPDLSAVGGALDELQAVCDAFPDCEIHIDLSELRVDNYHTGLLY
                     AAYAADFHDAVARGGRYDGLGGYFGRARPATGFSFDLRSFIGRLPTSERQPAVLVDAE
                     DAEAAREAVEALREQGQCVVIDYGIGHNVSEELAGRLKKTDGVWQVVKR"
     gene            3004..4302
                     /locus_tag="WHR07_001788"
     CDS             3004..4302
                     /locus_tag="WHR07_001788"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEZ2130975.1"
                     /translation="MAKNVVVIGAQWGDEGKGKIVDWLAEEAGGVVRFQGGHNAGHTL
                     VVGGKKTILRLIPSGILHESLDCFIGSGVVVSPEALLGEIDELNAAGVKNVEGRLKIA
                     PTCPLILPYHIALDQAREASRGKGKIGTTGRGIGPAYEDKVARRAIRAADLLHPEKLR
                     EKLDAILAYYNVQLQHLHNAEPVKAEDVMAVIEKVALRIAPMITDVSRVLNEKNKNGE
                     KLLFEGAQGALLDIDYGTYPFVTSSNCLAGAASAGAGVGPQMLDYVLGIVKAYTTRVG
                     SGPFPTELFDEVGAGLAERGHEFGSVTGRARRCGWFDAAALKRSIQINGISGMCITKL
                     DVMDGVETINICVGYELPDGGKTDILPCGSDAVETCKPIYETMPGWRESTFGVKSYDA
                     LPANAKAYLKRIEEVCGAPVAIVSTGPDREETIVLHHPFA"
BASE COUNT         1045 a         1196 c         1249 g          879 t
ORIGIN      
        1 tgttaatcca ctatattttt aatcggcgga gttttcagac agccttatgc gatctgacca
       61 tctccctact gcacaattcc aagcaccaca ccaaggcgat ggcggcgatg gtgagcgagg
      121 caatcaatgc cgtccagaag ccgtaaatgc ccatatcgaa acggtaggcg agcaggtagc
      181 ccggcagcag accgcagccc caaaaggcgg cggcgtggat gaacatcggc acctttgtaa
      241 ctttgtagcc gcgcaaggcg taggaggcga tacattgggt gaagtctgcc ggttggaaca
      301 agccggcgaa cagtaagacg gtggcggcga tgcttaaaac cgccggatca ttgttgtaca
      361 tacttaccag cggcgaacgg aataatacca aggaaagcac ggtaatcacg gcgagcatcc
      421 atcctaacac cagtgacacg cccgaaatat aacgcgcccg cgaaaattcg cgccgcccaa
      481 gcgaaaagcc gatgcgcacc gtccccgccg agccgacgct ttgcggaatc atatagagaa
      541 tccccgacaa actgatgccg acctgctgcg ccgccacata atcctcgccg aaaggcgcaa
      601 tcaaaaacac gataaacgaa aacgcgctgg cttccaaaaa ataagacagc ccgatgggtg
      661 cgccgatttt ccaaatctgt ttgaacaccg cccaatccgg tttgccgaat ttcgccgtca
      721 gtccgaatgg gcggaagaaa ttttccttgg cgatataaat ccacaatgcc agcgcgctga
      781 accacaacac tgccatcgtc gccagtccgc agcctgcgcc gcccaaagcg ggcataccga
      841 atttgccgta aacgaaaata tagttcagcg gcacgttcaa cacaaacgcc gcaaagctga
      901 ccaacataat caggcgcggg cggttcaggc tggaggcgta ggcgtgcagt gcgcggtgta
      961 ccattgccgc cggcatcgcc aagctggtga acagcatata ctgcgccatt gtgccttcca
     1021 cataatcgct caaggtcagc cagttgcgga acggcgtaat cgccgcccac atcaataccg
     1081 tgccgaacac gcccaaaaac agcccgaacc aaatcccctg ccgccccgtt tcgcccactt
     1141 cgtcggtttt acccgcgccg taaagctggg caatcatcgg gttcagcgcc gccataatgc
     1201 ccataaaggt aatataaacc gtggcaaacg cgctgctgcc caaagccacc gccgccaagt
     1261 cttccttgcc tgcaccaccc gccatcacag tatcgataaa accgatgccc acctgcgcga
     1321 cctgcgccaa cagcatgggc agggcaaggg cggtcagcag gcggacttct ttcaggaaga
     1381 cggaaaagga aaagcggttg aggtcgagca gcataagtgt tcaatcaaca aaaatgccgt
     1441 ctgaagcaga aaacggcagc aggaagtgat gagaaataat ggtgcacatt atatcgtaaa
     1501 aaaatgctgt gccgtcagac ggcggataca gggtataaaa gtatattcag attgtgtgta
     1561 ttttatggta aagtttggtt ttaacgactt gacggcattg agccgtcgga caggggctgt
     1621 tcggattctg aatcggaagg aagcatcgcc gttttgacag cggcgtgatg cgttgcggca
     1681 aagatgccgt ctgattgcgg atcgggcagc cttttgtatt tacatgataa aatagaaggc
     1741 agattctcat gcagacatgg cagcttccgg aacatatcgc cgacgtactg cccacgaacg
     1801 cgcggcagct tgaaagcgcg agggagcagt tgttggcact gttccgcgta cacggttatg
     1861 aactggtaca gcctccgctg atggagtacg cacattccct gctgacgcat atcgatgcgg
     1921 ggctttccct gaaaaccatt ttggtaacgg acaggctcag cggcaggcag ttgggcatac
     1981 gcgccgacat cacgccgcag gtggcgcgta tcgatgccca tcttttatcc gccaaccaag
     2041 ggattaatcg gttgtgttat gccggtccgg tgttgcacgc gcagcccgac ggtctgctga
     2101 atatgcgcga acccttgcag gcaggggcgg aaatgtacgg ttttgccgac atccgtggcg
     2161 acatcgagct gatagacctg atgctgaaaa gcatgaaaat tgccgatatg ggcaaagtgc
     2221 tgctttcgct ggggcatatc ggcatatttc gcgccttgtc cgatgcggcg catttggatg
     2281 cggggcagtc tgcaacgctg cttgccttga tgcaggataa agataccggg acggtcgaag
     2341 cgcaggtcaa ggcttggaag ctggacggca tgtgggcaaa agcattctcg ctgctgccgc
     2401 gcctgtacgg cgggcgtgaa gtgttgtccg acgcgcgcgg acggttgccg gatttgtcgg
     2461 cggtcggcgg cgcgttagac gaattgcagg cggtgtgcga cgcattcccc gattgtgaaa
     2521 tccatatcga cttgtccgag ctgcgtgtcg acaattacca cacgggcttg ctgtatgccg
     2581 cctatgccgc cgatttccac gacgcggtcg cgcgcggcgg gcgttatgac ggattgggcg
     2641 gatatttcgg cagggcgcgc ccggcaacgg gattcagttt cgacttgcgc agctttatcg
     2701 ggcgtttgcc taccagcgaa cggcagcccg ccgtgttggt cgatgcggaa gatgccgaag
     2761 cggcgcgcga agcagtcgaa gccttgcgtg aacaagggca gtgtgtcgtg attgactacg
     2821 gtatcggaca caatgtttcg gaagagcttg caggccgtct gaaaaagacg gacggcgttt
     2881 ggcaggtcgt gaaacgctaa atacccgttc atggcggatg aaaggcaaat cgtggtgggg
     2941 cgcaaagccg caccggtttg gggatttccg caataatttt taatatcgat aggttatatg
     3001 gctatggcta aaaatgttgt agtaatcggc gcacagtggg gcgacgaggg taaaggtaaa
     3061 atcgttgact ggctggcgga agaagccggc ggcgtggtgc gcttccaagg cggccacaat
     3121 gcgggtcata ctttggtcgt cggcggcaaa aaaaccattt tgcgcctgat tccgagcggc
     3181 atcctgcatg aaagtctgga ctgcttcatc ggttcgggcg ttgtcgtctc ccccgaagcc
     3241 ctgttgggcg aaatcgacga gttaaacgct gcaggcgtga aaaacgtcga aggccgtctg
     3301 aaaatcgcgc cgacctgccc gctgatcctg ccttaccaca tcgcgctcga ccaagcccgc
     3361 gaagcatcgc gcggcaaagg caaaatcggc acgaccggcc gcggcatcgg ccctgcctac
     3421 gaagacaaag tggcacgccg cgccattcgc gccgccgatt tgctgcatcc tgaaaaactg
     3481 cgtgaaaaac tggatgccat ccttgcctat tacaatgtcc aactgcaaca tctgcacaat
     3541 gccgagccgg ttaaagcgga agacgtgatg gcggttatcg aaaaagtcgc gctgcgcatt
     3601 gcgccgatga ttaccgacgt gtcccgcgtg ttgaacgaga aaaacaaaaa cggcgaaaaa
     3661 ctgctgtttg aaggcgcgca aggtgcgttg ttggacatcg actacggcac ttatcccttc
     3721 gttacctcgt ccaactgtct ggcgggagcc gcttccgcag gcgcgggcgt aggccctcaa
     3781 atgctggatt atgttttggg catcgtcaaa gcctatacca cgcgcgtcgg ttcaggcccg
     3841 ttcccgaccg aattgttcga cgaagtaggc gcaggtttgg cggaacgcgg acacgaattc
     3901 ggctcggtaa ccggccgcgc acgccgctgc ggctggtttg atgccgccgc cctgaaacgc
     3961 tccatccaaa tcaacggcat ttccggtatg tgcattacca aactcgatgt aatggacggc
     4021 gttgaaacca tcaatatctg cgtcggctac gaattgcccg acggcggcaa aaccgatatc
     4081 ctgccttgcg gttccgatgc ggtggaaacc tgcaagccga tttacgaaac catgcccggc
     4141 tggcgtgaat ccactttcgg cgtgaaaagc tacgacgcat tacctgccaa tgccaaagca
     4201 tatttgaaac ggattgaaga agtctgcggt gcgccggtcg ccatcgtctc caccggcccc
     4261 gaccgagaag aaacgattgt gctgcatcat ccgttcgcat aaggttttgc agtaaaaatg
     4321 ccgtctgaag cccctccgag ttcagacggc atttttgctg ccgttttat
//
LOCUS       DAWGKF010000161         4361 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.161, whole genome shotgun sequence.
ACCESSION   DAWGKF010000161 DAWGKF010000000
VERSION     DAWGKF010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4361)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4361)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4361
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.161"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(69..2045)
                     /locus_tag="WHR07_001789"
     CDS             complement(69..2045)
                     /locus_tag="WHR07_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEZ2130976.1"
                     /translation="MNEFSLAPIVVVLLVSVITVILCRKFNIPSMLGYLLVGFLAGPG
                     MLSLIPKSHATDYLGEIGIVFLMFSIGLEFSLPKLRAMRRLVFGLGGLQVGVTMLSVM
                     GILMLTGVPFNWAFAVSGALAMSSTAIVSRILSEKTELGQPHGQMAMGVLLMQDIAVV
                     PLMILIPALAGGGDGNIWAALGLAFAKMLLTLGLLFFVGSKIMSRWFRMVAKRKSSEL
                     FMINVLLVTLGVAYLTELEGLSMALGAFVAGMLLSETEYRFQVEDDIRPFRDILLGFF
                     FITVGMKLDIQALIGGWRQVLMLLAMLLVLKALVVFAIAFKMKHSVGDSLKTALYLAQ
                     GGEFGFVMLAIAGQLDMVSPEWEQAATAAVLLSMIIAPFLLGGSDALVGRLVKSSWDM
                     KSLDLHSMLVETMSKSDHVLIVGFGRGGQTVGRVLAQEDIPYFALDLDIARVQVARSA
                     GEPVSFGDAKRREVLEAAGLGRAKMVVLTLNNMHETQHVLDNVLSMYPNMPVYVRATN
                     DDYVKTFTDIGAEEAVSDTKETGLVLAGYAMLGNGASYRHVYQTMANIRHSRYAALEG
                     LFVGSDDEAGFGENGETVRHAFPLAAEAYAVGKTVGTLPMAAYGIKLLFVRRRTGRIE
                     NPDASFTLEGGDVLVVAGKKEEIISFENWSLQGI"
     gene            2194..3033
                     /locus_tag="WHR07_001790"
     CDS             2194..3033
                     /locus_tag="WHR07_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit B"
                     /protein_id="HEZ2130977.1"
                     /translation="MTATAAAIDRLLPQTQCRECGYDGCLPYAQAVATGEAYNLCAPG
                     GETVIRDISALLGKPLVAPAKTQAKALARIDETACIGCTACIRACPADAIMGAGKLMH
                     TVIADECTGCGLCVAPCPVDCIHMQPVADTVLPRARRFSLSADSRFAAAEHARARYLK
                     RNERKQREADERKAMLAEREAAVRNARPQTPDTPKKPAFNPADLIAKAMAKAQTQQDR
                     LAAADNRKDYQAKQIAEARERAELRRAQRDMKYGSDSEKAAALEYLKQYKAKQDAAQN
                     TAS"
     gene            3232..4263
                     /gene="gap"
                     /locus_tag="WHR07_001791"
     CDS             3232..4263
                     /gene="gap"
                     /locus_tag="WHR07_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEZ2130978.1"
                     /translation="MGIKVAINGYGRIGRQVLRAIYDYQIQDQLQIVAVNASGSLETN
                     AHLTKFDTVHGRFEADVSHDGGNLIVNGDKIPFFSTRNPAELPWKELGVDLVMECTGA
                     FTSKEKAKIHLESGAKKVLISAPGGDDVDATVVYGVNDSVLTADMTVVSNASCTTNCL
                     SPVAKVLSESVGIVKGAMTTIHALTNDQTVTDVRHKDLRRARSGVENMIPTKTGAAKA
                     VGLVLPELKGRLDGLAIRVPTVNVSLVDLSFQAARDTTVEEINALMKAASEAGALKGV
                     LGYNTLPLVSMDFNHTTEASHFDATLTKVVDGNMIKVFAWYDNEWGFSCQMLNTARRM
                     FGLEVRPLK"
BASE COUNT         1103 a         1465 c         1015 g          778 t
ORIGIN      
        1 tgcgatttgc gaaagcgtta ttaaaccaaa taaccggaaa tggcgcaagc cttatttcgg
       61 catttcattt atattccctg caaactccag ttttcaaaag agataatttc ttcttttttg
      121 cctgcgacca ccaacacgtc accgccttcc aatgtaaacg aggcatccgg gttttcaatc
      181 cggccggtgc ggcggcggac gaacaagagt ttgatgccgt aagccgccat cggaagcgtg
      241 ccgactgttt tgccgacggc gtatgcttct gcagccaaag gaaaggcgtg acggacggtt
      301 tcgccgtttt cgccgaatcc tgcctcatca tcactaccga caaacagtcc ctccaacgcg
      361 gcataacggc tgtggcggat atttgccatc gtctgataga cgtgccgata cgacgcgccg
      421 ttgcctaaca tcgcatagcc tgccagcacg agtccggttt ctttggtgtc cgacacggct
      481 tcttccgcac ctatatcggt aaacgttttc acataatcgt cgttggtggc gcgcacatat
      541 acgggcatat tgggatacat ggacagcaca ttgtctaaaa cgtgttgcgt ttcgtgcata
      601 ttgttgagcg tcagcaccac cattttcgcc cgtcccagac cggcggcttc caatacttcc
      661 ctgcgtttcg catcgccgaa cgacaccggt tcgcccgcac ttctggcaac ctgcacccgc
      721 gcaatgtcca agtcgagcgc gaaatacgga atatcctctt gggcaaggac gcgtccgacc
      781 gtctgcccgc ccctgccgaa gccgacaatc agcacatggt cggacttgct catggtttct
      841 accagcatac tgtgcagatc gagcgacttc atgtcccagc ttgacttgac caaacgcccg
      901 accagcgcat cgctgccgcc caagaggaag ggcgcgataa tcatcgacag cagaaccgcc
      961 gccgtcgccg cctgttccca ttctggcgaa accatatcaa gctgcccggc aatggccagc
     1021 atcacgaagc cgaactcgcc gccctgcgcg agatacaaag ccgttttgag gctgtcgccg
     1081 accgaatgtt tcattttgaa ggcaatggca aacacaacca gtgccttcaa caccagcagc
     1141 attgccaaca gcatcaatac ctgccgccag ccgccgatca atgcctgaat gtccagcttc
     1201 atgccgaccg tgataaagaa aaagccgagc aaaatatcgc ggaacgggcg gatgtcgtct
     1261 tcgacttgga aacggtattc cgtttccgaa agcagcatgc cggcaacgaa tgcgcccaac
     1321 gccatagaca aaccttccag ctcagtcaga taagccacac ccaaggttac cagcagcaca
     1381 ttgatcataa agagttcgga cgatttgcgt tttgccacca tcctgaacca tcgcgacata
     1441 attttgctgc cgacgaaaaa cagcagcccc agcgtcagca gcatttttgc aaacgccaaa
     1501 cccaaggccg cccaaatatt tccgtcccct ccgcccgcca gcgcgggaat cagaatcatc
     1561 agcggcacga cggcgatgtc ctgcatcagc agcacgccca tcgccatctg accgtgcggc
     1621 tgccccaatt ccgtcttttc cgacaaaatc cggctcacaa tcgccgtgga cgacatcgcc
     1681 aacgcgcccg acacggcaaa cgcccaattg aacgggacgc ccgtcagcat cagtatgccc
     1741 attaccgaca gcatcgtaac gccgacctgc aaaccaccca gcccgaacac cagccgcctc
     1801 attgccctca gcttgggcag cgaaaactcc aagcctatac tgaacatcag gaacacaatc
     1861 ccgatttcgc ccaaataatc cgtcgcatgg cttttcggaa tcaggctgag cataccgggc
     1921 cccgccaaaa agcccaccag caggtagccc agcatggagg gaatgttgaa cttgcggcac
     1981 aggatcaccg taatgaccga caccagcaaa acaaccacaa taggggcaag cgaaaattcg
     2041 ttcataggcc gtccgaacag gaaaatacag aaaaatgccg tctgaaacgg catacgccgc
     2101 cgcattataa caaaacaccg cgcaccatcc gaaacgggcg cggcatacaa ttctgctaaa
     2161 atacgccctt tcgattttga gccgcacacc gacatgaccg ccacagccgc cgccatagac
     2221 cgcctgcttc cccaaaccca atgccgcgaa tgcggctacg acggctgcct gccctatgca
     2281 caggcagtcg caacaggcga agcgtacaac ctctgcgccc cgggcggaga aaccgtcatt
     2341 cgggacattt ccgccctgct cggcaaaccc cttgtcgcac ctgccaaaac ccaagccaaa
     2401 gcactcgccc ggatagacga aaccgcctgt atcggctgca ccgcctgcat ccgcgcctgc
     2461 cctgccgatg ccattatggg cgcgggcaaa cttatgcaca ccgtcatcgc cgacgaatgc
     2521 accggctgcg gactctgcgt cgccccctgc cccgtcgact gcatccatat gcagcccgtt
     2581 gccgacaccg tcctgccccg cgcgcgtcgc ttcagcctgt ccgccgacag ccgttttgcc
     2641 gccgccgaac acgcgcgcgc gcgctacctc aaacgcaacg aacgcaaaca gcgcgaagcc
     2701 gacgaacgca aggccatgct tgccgaacgc gaagccgccg tccgcaacgc gcgtccgcaa
     2761 acacccgaca caccgaaaaa accggcgttt aaccctgccg acctcatcgc caaagccatg
     2821 gcaaaagcgc aaacccaaca agaccgcctc gccgccgccg acaaccgcaa agactatcag
     2881 gcgaaacaga tagccgaagc ccgcgaacgc gccgagttgc gccgcgccca acgcgatatg
     2941 aaatacggca gcgacagcga aaaagccgcc gccctcgaat acctcaaaca atacaaagcc
     3001 aagcaggatg ccgcacaaaa caccgcctcc tgacccttcc ctgatatgcc gtctgaagcc
     3061 gcttcagacg gcattttatc aagctctccg tccgccgcac ccgtgccgtc cgcatcttac
     3121 cgcccaccct tccggccgcg ccgttttcaa taaaatatta attacacgcc actacaaatt
     3181 tgctataatc cgccccgaaa atctacccaa ccctcaacaa aggaacgaac catgggcatc
     3241 aaagtcgcca tcaacggcta cggacgcatc ggccgccagg ttttgcgcgc catctacgat
     3301 tatcagattc aagaccaact ccaaatcgtc gccgtcaacg ccagcggtag ccttgaaacc
     3361 aacgcccacc tcaccaaatt cgacaccgtg cacggacgct ttgaagccga cgtatcccac
     3421 gacggcggca acctcatcgt caacggcgac aaaatcccct tcttctcgac ccgcaaccct
     3481 gccgaactgc cgtggaaaga actcggtgtc gatttggtca tggaatgcac cggcgcgttt
     3541 accagcaaag aaaaagccaa aatccacctc gaaagcggcg cgaaaaaagt cctcatttcc
     3601 gcaccgggcg gcgacgatgt cgatgcaacc gtcgtgtacg gcgtgaacga cagcgtcctg
     3661 accgccgaca tgaccgtcgt ttccaacgct tcctgcacca ccaactgcct ctcgccggtt
     3721 gccaaagtgt tgagcgaaag cgtcggcatc gtcaaaggcg cgatgaccac catccacgcg
     3781 ctgaccaacg accaaaccgt taccgacgtg cgccacaaag acctgcgccg cgcccgcagc
     3841 ggcgtggaaa acatgattcc gaccaaaacc ggcgcggcaa aagccgtcgg tttggtactg
     3901 cccgaattga aaggcaggct cgacgggctt gccatccgcg tgccgaccgt caacgtatca
     3961 ttggtagatt tgagcttcca agccgcgcgc gacacgacag tcgaagaaat caacgcactg
     4021 atgaaagccg cctcggaagc aggcgcgctc aaaggcgttt taggctacaa caccctgccc
     4081 ttggtttcca tggacttcaa ccacactacc gaagccagcc acttcgacgc aacactgacc
     4141 aaagtcgttg acggcaacat gattaaagtc ttcgcatggt atgacaacga atggggcttc
     4201 agctgccaaa tgctgaacac cgcacgccgt atgttcggac ttgaagtgcg cccgctcaaa
     4261 taagcaataa accgtcaaac aaaatgccgt ctgaaacccg atgttttcaa gttccagacg
     4321 gcatttttca ccgtgatttt acccggctgt cgtcatttcc a
//
LOCUS       DAWGKF010000162         4260 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.162, whole genome shotgun sequence.
ACCESSION   DAWGKF010000162 DAWGKF010000000
VERSION     DAWGKF010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4260)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4260)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4260
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.162"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            537..2264
                     /gene="ilvB"
                     /locus_tag="WHR07_001792"
     CDS             537..2264
                     /gene="ilvB"
                     /locus_tag="WHR07_001792"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HEZ2130979.1"
                     /translation="MQLSGAQIIVQSLKAEGVEYVFGYPGGAVIEIYDALFQLNKFKH
                     ILTRHEQAAVHAADAYARVSGKVGVALVTSGPGVTNALTGIATAYTDSIPMVVISGQV
                     GNSLIGTDAFQEVDTVGITRPCVKHNFLVTDINELAETIKKAFQIAASGRPGPVVVDV
                     PKDVTQAMAKFSYPQEDIFIRSYQPVVQGHIGQIKKAVQMLASAKRPVVYFGGGVVLG
                     NASEELTRFVRMTGAPCTGTLMGLGAYPSGDRQFLGMLGMHGTYEANLAMQNADVVLA
                     VGARFDDRVVSVPSKFFEKAKKVIHIDVDPSSIAKRVKVDIPIVGDVKNVLSEMVALW
                     QKQEFMPSEDALGKWWKTIEEWRSQDCLWFDNGSEIIKPQYVIQKLAEITGNSAIITS
                     DVGQHQMFAAQYYPFERPRQWLNSGGLGTMGVGLPYAIGAKLAAPDQDVFCITGDGSI
                     QMNIQELSTCFQYRIPVNVITLNNGYLGMVRQWQEIYYGGRESETYFDSLPDFVKLAE
                     AYGHIGIRVDKKSDVEGALLEALNQKDRLVFIDFLTDQKQNVMPMVGNGKGLDEMVLP
                     PHMRADEKA"
     gene            2275..2766
                     /gene="ilvN"
                     /locus_tag="WHR07_001793"
     CDS             2275..2766
                     /gene="ilvN"
                     /locus_tag="WHR07_001793"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HEZ2130980.1"
                     /translation="MRHILSVLIENESGAMSRVVGLFSARDYNIDSLAVAPTEDKTLS
                     RMTIVTHGDEQVIEQITKQLNKLIEVIKVVDLNESRFVERELMLVKVRAAGKDRDEFL
                     RLTEIYRGSIIDVTDRSYTIEITGSTDKLDSFLETVGRAQILETVRTGAAGIGRGERI
                     LKI"
     gene            2833..3126
                     /locus_tag="WHR07_001794"
     CDS             2833..3126
                     /locus_tag="WHR07_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004521031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEZ2130981.1"
                     /translation="MSNIKIVALVTVKPEYTETLVAQFKELVKASRAEEGNISYDLHQ
                     EIGKPNRFVFVENWKSQAAIDEHNASAHFQAFVQSVDGKTEALEIVLMNEVAA"
     gene            3206..4219
                     /gene="ilvC"
                     /locus_tag="WHR07_001795"
     CDS             3206..4219
                     /gene="ilvC"
                     /locus_tag="WHR07_001795"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEZ2130982.1"
                     /translation="MQVYYDKDADLSLIKGKTVAIIGYGSQGHAHAANLKDSGVNVVI
                     GLRQGSSWKKAEAAGHVVKTVAEATKEADVVMLLLPDETMPAVYHAEVTANLKEGATL
                     AFAHGFNVHYNQIVPRADLDVIMVAPKGPGHTVRSEYKRGGGVPSLIAVYQDNSGKAK
                     DIALSYAAANGGTKGGVIETTFREETETDLFGEQAVLCGGVVELIKAGFETLTEAGYA
                     PEMAYFECLHEMKLIVDLIFEGGIANMNYSISNNAEYGEYVTGPEVVNASSKEAMRNA
                     LKRIQTGEYAKMFIQEGNVNYASMTARRRLNADHQVEKVGAQLRAMMPWITANKLVDQ
                     DKN"
BASE COUNT         1105 a         1014 c         1077 g         1064 t
ORIGIN      
        1 tcaatatatt aagtcgttgt tagccctctt ggttctgtca atgccgtcca atacagtccg
       61 gtgcaatgag ccattttcag gaagtatggt tgggaatatt tttgatatat caaaaataaa
      121 atcaagttca atcaatatcc cgagtcttta ttgggatgaa accctgtaaa ttttacaatt
      181 cttgatatcg aagaagggtt tttcacatct gcccctccta cacaaactgt caacaatttc
      241 catctttcaa aaaaggtact cctgatttta ttcttttaaa atcaatcaat aatttctctg
      301 ctttcaaaaa atattaaaag atgaaagatt tttcttgatt gaactgtcgg tttgcgttat
      361 cgtttctact ctttttcaca aactctgtgt tcctttccaa ttgattggat aatccgtctg
      421 ttgccgtgtt cccccaatgc gcgtacccta aatcgctgct tggtggaatt gcattacagg
      481 tgctgtggca aagcggtttg tccctattgg tttgaaaccg tataaaagag gtcgttatgc
      541 agttatcagg cgcgcaaatc atagtgcaga gtctcaaagc cgaaggtgtc gagtacgttt
      601 tcggttatcc cggcggtgcg gttatcgaaa tctacgatgc ccttttccaa ctcaataaat
      661 tcaagcacat tctgacccgt cacgagcagg cggcagtaca cgcggcagat gcgtatgcgc
      721 gcgtcagcgg taaggtgggc gtggcattgg ttacatccgg cccgggcgtt accaatgcac
      781 tgaccggtat tgctactgcc tatacggatt cgattccgat ggtggtcatc agcgggcagg
      841 taggcaattc cctgattggt acggatgcgt tccaagaagt tgatacggtg ggtattaccc
      901 gtccgtgcgt caaacacaat ttcctggtta cggacatcaa tgagttggcg gaaaccatta
      961 aaaaggcgtt ccaaattgcc gcaagcggcc gaccggggcc cgtggtggtt gatgtcccga
     1021 aagatgttac gcaggcgatg gcgaaattca gctatcctca ggaagacatt tttatccgtt
     1081 cgtatcaacc ggttgttcaa gggcatatcg gtcagattaa aaaggccgtg cagatgttgg
     1141 catctgccaa acgtccggtc gtctattttg gcggcggcgt ggtgttgggt aatgcttctg
     1201 aagagctgac ccgatttgtc cgaatgacgg gtgctccgtg cacgggtacg ctgatgggct
     1261 tgggcgctta tccttccggc gaccgccaat tcctcggtat gctcggtatg cacggtactt
     1321 acgaggcaaa ccttgccatg cagaatgcgg atgtcgttct tgccgtaggt gcgcgttttg
     1381 acgaccgtgt ggtttccgta ccgtccaaat ttttcgagaa ggcgaagaag gttatccata
     1441 tcgatgtcga tccttccagc atcgccaaac gcgtgaaggt ggacattccg attgtcggcg
     1501 acgtgaaaaa tgttttgtct gagatggttg cgctgtggca aaaacaagag ttcatgccgt
     1561 ctgaagatgc tttgggcaaa tggtggaaaa ccatagagga atggcgttcc caagattgct
     1621 tgtggtttga caacggcagc gaaattatca agccacaata tgtgattcag aagcttgccg
     1681 agattaccgg caattcggca atcatcacat cggatgtagg gcagcatcaa atgtttgcgg
     1741 ctcaatatta tcccttcgaa cgtccgcgcc aatggctcaa ttccggcggt ttgggtacga
     1801 tgggcgtggg tctgccttat gcgattggtg caaaacttgc cgccccggat caagacgtat
     1861 tctgtattac cggcgacggc tcgattcaga tgaacatcca agagttgtcc acctgtttcc
     1921 aatatcggat tccggttaac gtcattacgc tgaacaacgg ttatctcggt atggtacgcc
     1981 agtggcagga aatatattac ggcggccgag agtcggaaac ttatttcgat tctttgcccg
     2041 atttcgtcaa acttgccgag gcatacggcc atatcggtat ccgcgtggac aagaagtctg
     2101 atgtggaagg tgcgttgttg gaagcattga accaaaaaga caggctggtg tttatcgact
     2161 tcctgaccga ccagaaacag aatgtgatgc ccatggtcgg caacggcaaa ggtttggacg
     2221 aaatggtact tccgccgcat atgcgtgcgg acgaaaaggc gtaaggagag gcaaatgcga
     2281 catatcttat ctgttctgat tgaaaacgaa tcaggtgcga tgagccgcgt ggtcggtttg
     2341 ttctctgcac gcgattacaa tatcgattct ttggcggttg cgccgaccga agacaaaacc
     2401 ctgtcccgta tgaccatcgt tacccacggc gacgagcagg ttatcgaaca aatcaccaag
     2461 caactcaata aattgattga agtgattaaa gtggtcgatt tgaacgaaag ccgttttgtc
     2521 gaacgcgaac tgatgttggt aaaagtccgt gccgccggca aagaccgcga cgaatttttg
     2581 cgtttgaccg aaatctaccg gggcagcatc atcgacgtaa ccgaccgcag ctatacgatt
     2641 gaaattaccg gctcgaccga caagctggat tcctttttgg aaacggtcgg acgcgcccaa
     2701 attttggaaa ccgtacgtac aggcgcggcc ggcatcggtc gcggtgagcg tattttgaaa
     2761 atttaacgcc gtaacctttc agacggcacg gtatttgaat gccgtctgaa aaacgaacgg
     2821 caggagagat ttatgtcgaa cattaaaatt gtcgcactgg ttaccgtcaa accggaatac
     2881 acagaaacac tggtagcaca gtttaaagaa ctggtcaaag ccagccgtgc agaagagggc
     2941 aacatcagct acgatctcca tcaggaaatc ggtaaaccga accgttttgt tttcgtggaa
     3001 aattggaaat cccaagcagc tattgacgaa cataacgcca gcgcgcattt ccaagccttc
     3061 gtccagtccg tcgacggcaa aaccgaagcg ttggaaatcg tattgatgaa tgaagttgcc
     3121 gcttaagcgg cacactctgt ttaacccgtc tgaagccgct caacatttta aggcttcgac
     3181 aaccatttac cttaaaggaa atcaaatgca agtctattac gataaagatg ccgatctgtc
     3241 cctaatcaaa ggcaaaaccg ttgccatcat cggttacggt tcgcaaggtc atgcccatgc
     3301 tgccaacctg aaagattcgg gtgtaaacgt ggtgatcggt ctgcgccaag gttcttcttg
     3361 gaaaaaagcc gaagcagccg gccatgtcgt caaaaccgtt gctgaagcga ccaaagaagc
     3421 cgatgtcgtt atgctgctgc tgcctgacga aaccatgcct gccgtctatc acgccgaagt
     3481 tacagccaat ttgaaagaag gcgcaacgct ggcatttgca cacggcttca acgtgcacta
     3541 caaccaaatc gttccgcgtg ccgacttgga cgtgattatg gttgccccca aaggtccggg
     3601 tcataccgta cgcagtgaat acaaacgcgg cggcggcgtg ccttctctga ttgccgttta
     3661 ccaagacaat tccggcaaag ccaaagacat cgccctgtct tatgcggctg ccaacggcgg
     3721 caccaaaggc ggtgtgattg aaaccacttt ccgcgaagaa accgaaaccg atctgtttgg
     3781 cgaacaagcc gtattgtgcg gcggcgtggt cgagttgatc aaggcgggtt ttgaaaccct
     3841 gaccgaagcc ggttacgcgc ctgaaatggc ttacttcgaa tgtctgcacg aaatgaaact
     3901 gattgttgac ctgattttcg aaggcggtat tgccaatatg aactactcca tttccaacaa
     3961 tgcggagtac ggcgaatacg ttaccggccc tgaagtggtc aatgcttcca gcaaagaagc
     4021 catgcgcaat gccctgaaac gcattcaaac cggcgaatac gcaaaaatgt ttatccaaga
     4081 gggtaatgtc aactacgcgt ctatgactgc ccgccgccgt ctgaatgccg accaccaagt
     4141 tgaaaaagtc ggcgcacaac tgcgtgccat gatgccttgg attactgcca acaaattggt
     4201 tgaccaagac aaaaactgat tgttttcaaa cgggactgcc tacacatcgt gtaggcagtt
//
LOCUS       DAWGKF010000163         4210 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.163, whole genome shotgun sequence.
ACCESSION   DAWGKF010000163 DAWGKF010000000
VERSION     DAWGKF010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4210)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4210)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4210
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.163"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(83..1129)
                     /gene="recA"
                     /locus_tag="WHR07_001796"
     CDS             complement(83..1129)
                     /gene="recA"
                     /locus_tag="WHR07_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEZ2130983.1"
                     /translation="MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGS
                     LGLDLALGVGGLPRGRIVEIFGPESSGKTTLCLEAVAQCQKNGGVCAFVDAEHAFDPV
                     YARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGIDMVVVDSVAALVPKAEIEGDMG
                     DSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFY
                     SSVRLDIRRTGSIKKGEEVLGNETRVKVIKNKVAPPFRQAEFDILYGEGISWEGELID
                     IGVKNDIINKSGAWYSYNGAKIGQGKDNVRVWLKENPEIADEIDAKIRALNGIEMHIT
                     EGTQDETDGERPEE"
     gene            1383..2147
                     /locus_tag="WHR07_001797"
     CDS             1383..2147
                     /locus_tag="WHR07_001797"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HEZ2130984.1"
                     /translation="MCSCLVVKNTVIGSGRTKIAVPLVARDAAELSAVLEQIKNMPFD
                     IAEFRADFLECAGSIGEILHHTQTVRDALPDKPLLFTFRRHGEGGSFPCSDDYYFKLL
                     DALIESRLPDIIDIELFSGETAVRRAVANAQKNGIAALLCNHEFHRTPPQEEIVCRLK
                     QMEDCGADICKIAVMPQSAEDVLTLLSATLKAKELAAKPIVTMSMGQTGAVSRLAGQV
                     FGSSITFGSGTQNSAPGQIGVSALRATLDCLENGAD"
     gene            2167..4182
                     /gene="rep"
                     /locus_tag="WHR07_001798"
     CDS             2167..4182
                     /gene="rep"
                     /locus_tag="WHR07_001798"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HEZ2130985.1"
                     /translation="MMKLNPQQLEAVRYLGGPLLVLAGAGSGKTGVITQKIKYLIVNV
                     GYLPHTVAAITFTNKAAAEMQERVAKMLHKSQTRGLTICTFHSLGMKILREEANHIGY
                     KKNFSILDSTDSAKIIGELLGGTGKEAVFKAQHQISLWKNDLKTPEDVVQTASNIWEQ
                     QTARVYASYQETLQSYQAVDFDDLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTN
                     TCQFTLMKLLTGAEGMFTAVGDDDQSIYAWRGANMENLRKMQENYPQMKVIKLEQNYR
                     STARILKIANKVIENNPKLFTKKLWSKLGEGEPVKVVACQNEQHEADWVVSQIVKQKL
                     IGGDKTQYADFAVLYRGKHQARIFEEALRGARIPYRLSGGQSFFDKAEIKDVLSYVRL
                     LANPNDDPAFLRAVTTPKRGIGDVTLGKLNTYAHEHECSLYEAAQNEEALATLNNTNR
                     QHLQAFMDMFGSYRAKAETGEAGEFINSLLEEIDYENHLMQNEEGKAGEIKWRNVSDL
                     VSWFARKGGEDGKNIIELAQTVALMTLLEGKDEEETDAVSLSTLHAAKGLEYPYVFLV
                     GCEEGVLPHNDSIEEGNVEEERRLMYVGITRAKRQLTLTHCVKRKKQGTWQFPEPSRF
                     IDEMPQEDLKILGRKGGEPIVSKEEGRRNLADIIGRLDSMKKGNPSD"
BASE COUNT         1003 a         1148 c         1150 g          909 t
ORIGIN      
        1 aaactcaaat caagccgttc ggaggctgct caaaaaaaac ggtacttcgc aacagaagta
       61 ccgtttatcg ggatttcagg ttttattctt cggggcgttc gccgtcggtt tcgtcctgcg
      121 tcccttcggt gatgtgcatt tctatgccgt tgagggcgcg gatttttgcg tcgatttcgt
      181 cggcaatttc gggattttcc ttcagccaga cgcggacgtt gtctttgccc tgaccgattt
      241 tcgcgccgtt gtagctgtac cacgcgccgg atttgttgat gatgtcgttt ttcacgccga
      301 tgtcgatcaa ttcgccttcc caactgatgc cttctccgta gaggatgtca aactctgcct
      361 gacggaacgg cggcgcgact ttgtttttga tgactttgac gcgggtttcg ttgcccaata
      421 cttcttcacc ttttttgatg gatccggtgc ggcggatgtc gaggcggacg gaagaataga
      481 atttcagcgc gttgccgccg gtcgtggtct cggggctgcc gaacattacg ccgatcttca
      541 tccggatttg gttgatgaac acaaccagcg tgttggtttt tttgatgtgt ccggtcagtt
      601 tgcgcaaagc ctggctcatc aggcgcgcct gcagtccgac atggctgtcc cccatatcgc
      661 cttcgatttc ggctttgggg acgagtgcgg ctacggaatc gacgactacc atatctatgc
      721 cgcccgaacg gacgagtgtg tcgcagattt ccaaagcctg ttcgccggta tcgggctggg
      781 acaggtaaag ctcttcgact tttacgccga gtttgcgggc gtaaacggga tcgaaggcgt
      841 gttcggcatc gacaaaggcg cacacgccgc cgtttttctg gcattgggcg acggcttcga
      901 ggcagagggt ggttttgccg gaggattctg ggccgaagat ttcgacgatg cgcccgcgcg
      961 gcagaccgcc gactccgagg gcgaggtcta atccgagcga tccggtggaa atgacttcga
     1021 ggttttcttc ctgctggctg ccgtccattt tcatgatggc gcctttgccg aaactttttt
     1081 cgatttgcgc cagtgcggcg gcaagtgctt tgcttttgtc gtctgacatt ggggttactc
     1141 cggaacaaat gcggtatgtg ggatgcggcg caacacgggc tgcggcgcgg gatgtgtatc
     1201 gttttcccga tgtgcgggct atcggtaatg ctgcttcacg aggttgccat tatcgcatat
     1261 ttccttgctt gccgatatgc gccaggacgc ggcggcttgt gccggaatgg aatctggatg
     1321 ccgtctaaaa ggcggccggc tttgttataa tggcggctgt tttttctgtg tgtgcctgtt
     1381 ttatgtgttc ctgccttgtt gtcaaaaata ccgttatcgg aagcggacgc accaaaatcg
     1441 ccgtgccgct tgtcgcccgc gatgccgccg aactttccgc cgtacttgag caaatcaaaa
     1501 atatgccctt cgatattgcg gagttccgcg ccgacttttt ggaatgcgcg ggcagtatcg
     1561 gcgaaatatt gcaccacacg cagaccgtcc gcgacgcgct gcccgacaag ccgctgctgt
     1621 ttacgttcag acggcatggc gaaggcggct cgttcccgtg ttcggacgat tattatttta
     1681 aactgctcga cgcgctgatc gaaagtcgcc tgcccgacat tatcgatatc gagctgtttt
     1741 ccggcgaaac cgccgtccgg cgcgctgtgg cgaatgctca aaaaaacggc atcgccgccc
     1801 tgctctgcaa tcatgagttt caccgcacgc cgccgcaaga agaaatcgta tgccgtctga
     1861 aacagatgga ggactgcggc gcggacatct gcaaaattgc ggtgatgccg caaagcgcgg
     1921 aagatgtgct gactttgctt tccgccacgc tcaaagcgaa agagcttgcc gccaaaccga
     1981 ttgttacgat gtcgatgggg cagacggggg cggtcagccg gcttgccgga caggtgttcg
     2041 gctcaagcat cacgttcggt tcgggaacgc aaaactccgc gccggggcaa atcggcgtat
     2101 ccgccctccg tgcgacactc gactgcctcg aaaacggcgc agactgattt cagacagcat
     2161 caaaacatga tgaaactcaa tccccaacag ctcgaagccg tccgctacct cggcggccca
     2221 ctgctcgtcc ttgccggtgc aggcagcggc aaaaccggcg tgattactca aaaaatcaag
     2281 tatttgattg tcaatgtcgg ctatctgccg cataccgttg ccgcgattac ctttaccaat
     2341 aaagccgccg cggaaatgca ggagcgcgtc gccaaaatgc tgcacaaatc gcaaacgcgc
     2401 gggctgacga tttgcacgtt ccactctttg ggcatgaaga ttctgcgcga agaggcgaac
     2461 catatcggtt acaaaaaaaa cttctccatt ctcgattcta ccgacagcgc gaaaatcatc
     2521 ggcgaactct taggcggtac gggcaaagaa gccgtattca aggcgcagca ccagatttcc
     2581 ttgtggaaaa acgatttaaa aacgcctgaa gatgtcgttc agacggcatc gaacatttgg
     2641 gaacaacaaa ccgcacgcgt gtatgcgagc tatcaggaaa ccttacaaag ctatcaggca
     2701 gtggacttcg acgacttgat ccgcctgcct gccgtgctgt tgcagcaaaa cagcgaagtg
     2761 cgcaacaaat ggcagcggcg gctgcgttat ctgctggttg acgaatgcca agatacgaat
     2821 acctgccaat ttacgttgat gaaacttctg accggcgcag aaggtatgtt taccgccgtc
     2881 ggcgacgacg accagtccat ctacgcatgg cgcggcgcga acatggaaaa cctgcgcaaa
     2941 atgcaggaaa actatccgca gatgaaggtc atcaaactgg agcaaaacta ccgctccacc
     3001 gcgcggattc tcaaaatcgc caacaaagtc atcgagaaca accccaagct gttcaccaaa
     3061 aaactttggt cgaaattggg cgaaggcgag cccgtcaaag tcgttgcctg ccaaaacgag
     3121 cagcacgaag ccgactgggt cgtcagccaa atcgtcaaac aaaaactcat cggcggcgac
     3181 aaaacccaat atgccgattt cgccgtgttg taccgcggaa agcatcaggc gaggattttc
     3241 gaggaagcat tgcgcggcgc gcgcatcccc taccgtctct ccggcggaca aagctttttc
     3301 gacaaagccg aaatcaaaga cgtgttgtct tatgtgcggc tgcttgccaa ccccaatgac
     3361 gatcccgcct ttctgcgtgc cgttaccacg cccaaacgcg gcatcggcga tgtcacgctg
     3421 ggcaagctca acacttacgc gcacgaacac gaatgcagcc tgtatgaagc cgcacaaaac
     3481 gaagaagccc ttgccacgct gaacaatacc aaccgccaac acctgcaagc ctttatggat
     3541 atgttcggca gctaccgcgc caaagcggaa accggcgaag caggcgagtt catcaacagc
     3601 ctgctcgaag aaatcgacta tgaaaaccat ttgatgcaaa acgaagaagg caaggccggc
     3661 gaaatcaaat ggcgcaatgt cagcgatttg gtatcatggt ttgcgcgaaa aggcggggaa
     3721 gacggcaaaa acatcatcga actcgcccaa accgtcgcct tgatgacgct tttggaagga
     3781 aaagacgaag aagaaaccga tgccgtctcg ctatccacgc tacacgccgc caaaggtttg
     3841 gagtatccgt atgttttcct tgtcggttgc gaagaaggcg ttttgccgca caacgacagt
     3901 atcgaagagg gcaacgtcga agaagaacgc cgcctgatgt acgtcggcat cacccgcgcc
     3961 aaacgccaac tcacgctgac ccactgcgtc aaacgcaaaa aacaaggcac atggcagttc
     4021 cccgaaccca gccgattcat agacgaaatg ccgcaggaag atttgaaaat cctggggcgc
     4081 aaaggcggcg agccgattgt cagcaaggaa gaaggcagac gcaaccttgc cgatataatc
     4141 ggaaggctcg acagcatgaa aaaaggcaat ccgtcggatt aaaccaagat agggaaacga
     4201 agccggagac
//
LOCUS       DAWGKF010000164         4198 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.164, whole genome shotgun sequence.
ACCESSION   DAWGKF010000164 DAWGKF010000000
VERSION     DAWGKF010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4198)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4198)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4198
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.164"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            1..380
                     /locus_tag="WHR07_001799"
                     /pseudo
     CDS             1..380
                     /locus_tag="WHR07_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            complement(283..612)
                     /locus_tag="WHR07_001800"
                     /pseudo
     CDS             complement(283..612)
                     /locus_tag="WHR07_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245042.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
     gene            882..1292
                     /locus_tag="WHR07_001801"
     CDS             882..1292
                     /locus_tag="WHR07_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEZ2130986.1"
                     /translation="MNHIARQFAILLGEGLKPLGIAPAQFPILLELWQKDGLSQQELV
                     ERADLKQATIANTLARMERDGLITREPNPDDARSRLIMLTEQARALQQQSTEIAQAIN
                     QTALSDLSANEQKLFLEMAAKIVARQQEMITGEK"
     gene            complement(1407..1958)
                     /locus_tag="WHR07_001802"
                     /pseudo
     CDS             complement(1407..1958)
                     /locus_tag="WHR07_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520560.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
     gene            complement(1999..2658)
                     /gene="ung"
                     /locus_tag="WHR07_001803"
     CDS             complement(1999..2658)
                     /gene="ung"
                     /locus_tag="WHR07_001803"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEZ2130987.1"
                     /translation="MDTWHDALGGEKQQPYFQEILNAVRQERLSGQIIYPPAADVFNA
                     FRLTAFDRVKAVILGQDPYHGAGQAHGLAFSVRQGIRIPPSLLNIYKELETDIEGFSI
                     PAHGCLTAWAEQGVLLLNTVLTVRAGQAHSHALLGWERFTDTVIRQLATHRKHLVFML
                     WGGYAQQKGRLIDSQNHLILTAPHPSPLSAYRGFFGCRHFSQANSYLSRHGIDPINWK
                     L"
     gene            2739..3146
                     /locus_tag="WHR07_001804"
     CDS             2739..3146
                     /locus_tag="WHR07_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HEZ2130988.1"
                     /translation="MTVWFVAAVAVLIIELLTGTVYLLVVSAALAGSGIAYGLTGSTP
                     AAVLTAALLSALGIWFVHAKTAVGKVETDSYQDLDAGQYVEILRHTGGNRYEVFYRGT
                     HWQAQNTGQEELEPGTRALIVRKEGNLLIIANP"
     gene            3161..4108
                     /locus_tag="WHR07_001805"
     CDS             3161..4108
                     /locus_tag="WHR07_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraslipin"
                     /protein_id="HEZ2130989.1"
                     /translation="MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGL
                     NILIPFIDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSN
                     YIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAAGAWGVKVLRYEIKD
                     LVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAV
                     NASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVA
                     AFNNLAKESNTLIMPANVADIGSLISAGMKIIDSSKTAK"
BASE COUNT         1029 a         1034 c         1097 g         1038 t
ORIGIN      
        1 gaacaaatca aaggcatcgg ttcgataacg acggctacgc tgatggcgat gttgcccgaa
       61 ttggggcggc tgagccacaa acggatagcg agtctggtcg gcattgcccc gcacccgagg
      121 gagagcgagg aaaccaaatt caaagccgct gctttggcgg aaggtctgcg gtgcgtaagg
      181 cactgtatat ggctaccgtg gcagcgacac gttttgaacc gcttattcgg gatttctacc
      241 aacgcctgct gtccaagggt aagccgtata aggttgctgt tgcggcatgt atgcgcaaac
      301 tgctgacgat atcgaatgcc cggatgcgtg attattttgc cgaaaacgat actgccgaaa
      361 acggtatccg gacggcttga tttgagtttt ggtatttttg cccgacgggg tgaaaaatac
      421 agttgctacg cgccaaacag acaatatcag cagcaggatt ccgactgctt tgtgcgaatt
      481 gattagaaat ttcaggtttt cgtcgatatt ccacgcaatg acggtagcga acataaacag
      541 gtagcaagct gctattgtcc aatgcaggaa gcgggttgtt gagccgtagc tttgcaaagt
      601 gtcgggtttc atgatgcttt ctcttgataa agggttagtc ggatttcggt atggcttaca
      661 gataggaaaa ccttctttaa agtattgaag ttcataagtg ttcttgaaca tttaagatag
      721 gtcgtctgaa agtgtttaga tagcaagcta ttaagctgca ataagtatag cgtgctatgt
      781 attaagatag caagctatat ttgtgatata atccgcaaca atttgatttg aaagaaaaca
      841 aagtggacga agttttcaaa actgaatcgg caggctattt gatgaaccac attgcccgcc
      901 aatttgccat tttattgggc gaaggtttaa agcctttggg catcgccccc gcgcaatttc
      961 cgatattgct ggaactgtgg caaaaagacg gtttgagcca gcaggaattg gtggaacgcg
     1021 ccgatttgaa gcaggcaacg attgccaaca ctttggcgcg gatggagcgc gacggactga
     1081 ttacgcgcga accgaatccc gacgatgcgc gcagccgcct gattatgctg acggagcaag
     1141 ctcgcgcctt gcagcagcag tccacggaaa ttgcccaagc catcaaccaa acggctttgt
     1201 cggatttgtc ggcaaacgaa caaaagttgt ttttggaaat ggcggcaaaa attgtggcgc
     1261 gacagcaaga gatgattacg ggcgagaagt gagggggccg atggcgcaac ttggaatttt
     1321 aaagtgcagg ctgcttttga ggtcgtctga aagcagcctg cgctttgaaa acaaggtgca
     1381 ggctgcttag ggtaatgtgt cgtttatcaa tccagtttca ggatttctcc gtcttccgga
     1441 acgttcacac ggctttcaat gccttgaccg cgtataaatt tacgcatatc ggtgcggctg
     1501 acggcggtat gattcacggt atccatgtgt acggtaatgc ctgaaatcag cgcgtagccc
     1561 gtgttcataa tcagataatc gggtttgtag cggttcaatg ctttgtttac atctgccgtc
     1621 cacacagtat cacccataat ataagcggtt ttgtgtccgc tgctttggaa tactacaccc
     1681 attgcatcac ctaagatttc ggctagctgc gggttggcat acatggcttc tgtaccatgt
     1741 acgccgccgg ttttgctgat ggttacgccg ttgaagacag tgctgccgtt caacacgcgt
     1801 acatcagtaa atccttggct gcggattttt gccgcgtcgg cttggtgctg cacatatacg
     1861 ggcaggtttt tcggaatgga acgtgcggcg gtttcgcccc aatggtcttc gtgggtatgg
     1921 gtaacgataa ctgcatccac accgtagatt gactggttcc ataagtgcag tttaagcaac
     1981 ttggcattca gacggcattc acagcttcca gtttatcgga tcgataccgt gccggctcaa
     2041 atagctgttt gcctgtgaaa aatggcggca gccgaaaaaa ccgcgatatg ccgacagagg
     2101 agacggatgc ggtgcggtca atatcaaatg attttgactg tctatcagcc tccctttttg
     2161 ttgtgcatac ccaccccaca acatgaagac aaggtgcttg cggtgtgtcg caagctgcct
     2221 gatgacggta tcggtaaagc gttcccagcc taaaagggcg tgcgaatgcg cctgtcctgc
     2281 acgcaccgtc aaaaccgtgt tcagaagcaa tacgccctgc tccgcccacg ctgtcagaca
     2341 gccgtgcgcg ggaatggaaa agccttcgat gtcggtttcc aactccttgt agatattgag
     2401 taaagacggc ggtatgcgga taccctgccg gacggaaaat gccaaaccgt gcgcctgccc
     2461 tgccccgtga tacggatctt gtccgagaat gacggctttg acccggtcga acgctgtcag
     2521 gcggaatgcg ttgaacacat ccgccgccgg cggatagatg atttgtcccg acaaacgttc
     2581 ctgcctgact gcatttaaaa tttcctgaaa atacggctgc tgtttttcgc cgccgagtgc
     2641 atcgtgccaa gtgtccatat ctgccctatc ctttcaaatt cggctatact gctgatattg
     2701 cgttattttg tcaaacgacg cgctttgtgg ggaaatgtat gactgtatgg tttgttgccg
     2761 ctgttgccgt cttaatcatc gaattattga cgggaacggt ttatcttttg gttgtcagcg
     2821 cggctttggc gggttcgggc attgcttacg ggctgaccgg cagtacgcct gccgccgtct
     2881 tgaccgccgc tctgctttcc gcgctgggta tttggttcgt acacgccaaa accgccgtgg
     2941 gaaaagttga aacggattca tatcaggatt tggatgccgg acaatatgtc gaaatcctcc
     3001 gacacacagg cggcaaccgt tacgaagttt tttatcgcgg tacgcactgg caggctcaaa
     3061 atacggggca agaagagctt gaaccaggaa ctcgcgccct aatcgtccgc aaggaaggca
     3121 accttcttat catcgcaaac ccttaacact cggaggaatt atggaatttt tcattatctt
     3181 gttggtagcc gttgccgttt tcggcttcaa atcctttgtc gtcatcccac agcaggaagt
     3241 ccacgttgtc gaaaggcttg gacgtttcca tcgcgccttg acggccggtt tgaatatttt
     3301 gattcccttt atcgaccgcg tcgcctaccg tcattcgctg aaagaaatcc ctttagacgt
     3361 acccagccag gtctgcatca cgcgcgacaa cacccagctg acggttgacg gcatcatcta
     3421 tttccaagta accgatccca aactcgcctc atacggttcg agcaactaca ttatggcgat
     3481 tacccagctt gcccaaacga cgctgcgttc cgttatcggg cgtatggagt tggacaaaac
     3541 gtttgaagaa cgcgacgaaa tcaacagcac cgtcgtctcc gccctcgatg aagccgccgg
     3601 agcttggggc gtgaaggttt tgcgttatga gattaaagac ttggttccgc cgcaagaaat
     3661 ccttcgctca atgcaggcgc aaattactgc cgaacgcgaa aaacgcgccc gtatcgccga
     3721 atccgaaggt cgtaaaatcg aacaaatcaa ccttgccagt ggtcagcgcg aagccgaaat
     3781 ccaacaatcc gaaggcgagg ctcaggctgc ggtcaatgcg tcaaatgccg aaaaaatcgc
     3841 ccgcatcaac cgcgccaaag gtgaagcgga atccttgcgc cttgttgccg aagccaatgc
     3901 cgaagccatc cgtcaaattg ccgccgccct tcaaacccaa ggcggcgcgg atgcggtcaa
     3961 tctgaagatt gcggaacaat acgtcgctgc gttcaacaat cttgccaaag aaagcaatac
     4021 gctgattatg cccgccaatg ttgccgacat cggcagcctg atttctgccg gtatgaaaat
     4081 tatcgacagc agcaaaaccg ccaaataagc cgtgatgaaa atgccgtctg aagctctgtt
     4141 ttcggggttc agacggcatt tttatttaaa cccgggcaag gttgtattcc gcttcaaa
//
LOCUS       DAWGKF010000165         4192 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.165, whole genome shotgun sequence.
ACCESSION   DAWGKF010000165 DAWGKF010000000
VERSION     DAWGKF010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4192)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4192)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4192
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.165"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(79..315)
                     /locus_tag="WHR07_001806"
                     /pseudo
     CDS             complement(79..315)
                     /locus_tag="WHR07_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240407.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="potassium:proton antiporter"
     gene            511..969
                     /locus_tag="WHR07_001807"
                     /pseudo
     CDS             511..969
                     /locus_tag="WHR07_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237797.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 family protein"
     gene            869..1237
                     /locus_tag="WHR07_001808"
     CDS             869..1237
                     /locus_tag="WHR07_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 family protein"
                     /protein_id="HEZ2130990.1"
                     /translation="MAAIGIGMTVLVYGIVAVIVKLDDLGMLLMRRPQTFSRSLGQML
                     TAFMPCFMRGLSVVGTLAMFLIGGVLVAHNLGLLHDFLHAQHWDAGWAEYFANLVVGL
                     LSGSIACAPALPLMNRFGRH"
     gene            1306..2844
                     /gene="lnt"
                     /locus_tag="WHR07_001809"
     CDS             1306..2844
                     /gene="lnt"
                     /locus_tag="WHR07_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HEZ2130991.1"
                     /translation="MVSKLDKYWQHPALYWPLLILFAAATPFTFAPYYHFWLMPLIFG
                     AFVRLIELRPRFAVSSAYLFGLTAYTTQFYWIHTALHDVSGLPDLYAVPLTFLLPAYL
                     ALYPALCFWLWKKFTLPRGIKIGLVLPILWTLTEFARERFLTGFGWGAIGYSQITPDS
                     PLAGFAPLGGIHMVTLATAFLGVWLVLASDNTARSGKRLLPIILIAALLAAGYTARQT
                     DFTRPDGSRSTVALLQGNIDQTLKWREDQVIPTIQKYYEQVGKTTADIVILPETAIPV
                     MRQNLPENILAKFAEQAQNNGSALAVGISQYTSDGNGYENAVINLTGYQENNQDGIPY
                     YAKNHLVPFGEYKPLPFLTTPLYKMMNMPLSDFRKGGGKQSALLMKNQKIAFNICYED
                     GFGDELIAAAKDATLLANASNMAWYGKSNAMYQHLQQSQARAMELGRYMVRATNTGAT
                     AIISPKGNIIAQAQPDTETVLEGHIKGYVGETPYMKTGSSWWLMGILTLAALILFIFR
                     NKEH"
     gene            3108..3971
                     /gene="rpoH"
                     /locus_tag="WHR07_001810"
     CDS             3108..3971
                     /gene="rpoH"
                     /locus_tag="WHR07_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HEZ2130992.1"
                     /translation="MNNAFALPAIQSGNGSLEQYIHTVNSIPMLSQEEETRLAERRIK
                     GDLNAAKQLILSHLRVVVSIARGYDGYGLNQADLIQEGNIGLMKAVKRYEPGRGARLF
                     SFAVHWIKAEIHEFILRNWRLVRVATTKPQRKLFFNLRSMRKNLNALSPKEAQDIADD
                     LGVKLSEVLEMEQRMTGHDIAIMADNSDDEDSFAPIDWLADHDSEPSRQLSKQAHYAL
                     QTEGLQNALAQLDDRSRRIVESRWLQDDGGLTLHQLAAEYGVSAERIRQIEAKAMQKL
                     RGFLTEEAEAV"
BASE COUNT         1020 a         1295 c          967 g          910 t
ORIGIN      
        1 cgaccttgcc gtcgggcagg atgtaccacg ccaaatcccc gcctgaagca cggtgtcgga
       61 ctgcatttcg attcggctat acgccttttc acgcaggctg taattgaatt tccacaaacc
      121 gccgaacact gccggcggac gcgcgaccag catcaggaac gccgcaatcg ccaaggcttc
      181 cgccgccccg tccaacacgc cggcgggaga aaccagcagc aaaggcattc ccaaacgtgc
      241 gggtaaagtg gtcgaaacca cgctcagaaa caacagtgcg ccacccggca ggaacagact
      301 gcccatccaa tccacgctaa cgattctccc ttaaaattca ttaaattaaa atcgaaagac
      361 tgtaacacgg cattttcttt tcacgaaact ttacttcacg tccgccacag cgttcagacg
      421 gcattttcct gtttcatgcc gcctgaaacc gcccaaatcc gcgttctcct atataatgtc
      481 ggactttgcg ccgcatttca ggattcttta atggcatttg cctcactatt taccctgccg
      541 gacgacatca ccgccgtttt ggacgatgtt gccctgatga ccaaagccgc cgcaaagaaa
      601 accgccggcg tggtcggcga cgatttggca cccaatgcca accgtgttac gggcgtatcg
      661 gcagaacgcg agttgccgat tgtttggtcg atggcgaaag gttctttttc caacaagccg
      721 gttttggtgc ctgcggccct gctgctttcc gccttcctgc cgcaactcat tacgccgctt
      781 ttgacggcag gcggcattta tctgtgcttt gaaggcgtag aaaagctgct gcacaagttt
      841 ctgcaccgac atgacgcgca tgctcgtaat ggcggcaatc ggcatcggca tgactgtttt
      901 ggtgtacgga atcgttgccg tcatcgtcaa actcgacgac ttaggcatgc tgctgatgcg
      961 ccgcccacaa accttttcgc gcagtttggg gcaaatgctg actgccttta tgccttgctt
     1021 tatgcgcggt ttgagcgtgg tcggcacgct tgccatgttt cttatcggcg gcgtactggt
     1081 cgcccacaac ctcggccttc tgcacgattt cctgcacgcg caacactggg acgctggctg
     1141 ggcggagtac ttcgccaacc tcgttgtcgg gctgctttcc ggttcgattg cctgcgcccc
     1201 cgccttgccg ctgatgaatc gtttcggcag gcattgattt ctttttcaaa taccgatgcc
     1261 gtttgaaaga tgttcagacg gtatcttccg aacagacaga tgaatatggt ttccaaactg
     1321 gacaaatact ggcagcaccc cgccctctac tggcctttgc tcatcctttt tgccgccgcc
     1381 acccccttta ccttcgcacc ctactaccac ttttggctga tgcccttgat tttcggtgcc
     1441 ttcgtccgcc tcatcgaact gcgtccgcgt tttgctgtct cttccgccta cctgttcggc
     1501 ctgaccgcat acacgacaca gttctactgg atacacaccg ccctgcacga cgtttccggc
     1561 ctgcccgacc tctatgccgt accgctgacc ttcctactcc ccgcctacct tgccctttat
     1621 ccggcactgt gtttctggct gtggaaaaaa tttaccctgc ctcggggcat aaaaatcggt
     1681 ttggtactgc ccatcctgtg gacactgacc gagtttgccc gcgaacgttt cctgaccgga
     1741 ttcggctggg gcgcaatcgg ctactcccaa atcaccccgg acagcccgct cgccggcttt
     1801 gccccattgg gcggcatcca catggttaca ctggcaaccg cctttctcgg tgtctggctg
     1861 gttttggcga gtgataacac cgcacgttcg ggcaaacgcc tgcttccaat tatcctgatt
     1921 gccgccctgc ttgccgcagg ctacaccgcc cgacaaaccg acttcacccg ccccgacggc
     1981 agccgcagca ccgtcgccct gcttcaaggc aacatcgacc aaaccctcaa atggcgtgaa
     2041 gaccaagtca tcccgaccat acagaaatat tacgaacagg tcggcaaaac cactgccgac
     2101 atcgtcatcc tgcccgaaac cgccatcccc gttatgcgcc aaaacctgcc ggaaaacata
     2161 ctggcaaaat ttgccgaaca ggcgcaaaac aacggcagcg cgctcgccgt cggcatcagc
     2221 caatacactt cggacggcaa cggttacgaa aacgccgtca tcaacctgac cggttatcag
     2281 gaaaacaatc aggacggcat cccctactac gccaaaaacc acctcgtccc cttcggcgaa
     2341 tacaaaccgc tgcccttcct gaccacgccg ctttacaaaa tgatgaatat gcccctttcc
     2401 gacttccgca aaggcggcgg taagcaatcc gccctgctga tgaaaaacca aaaaatcgcc
     2461 ttcaacatct gttacgaaga cggattcggc gacgaactga ttgccgccgc caaagatgcc
     2521 acactgcttg ccaatgccag caatatggcg tggtacggaa aatccaacgc catgtaccag
     2581 cacctccaac aatcgcaggc gcgggctatg gaactcggac gctatatggt ccgtgccacc
     2641 aacaccggcg caaccgccat catctccccc aaaggcaaca tcatcgccca agcccaaccc
     2701 gatacggaaa ccgtattgga aggacacatc aaaggctatg tcggcgaaac gccctatatg
     2761 aaaaccggca gttcatggtg gttgatgggc atattgaccc tagccgcact gattcttttc
     2821 atcttccgaa acaaagaaca ctgatacctg cacagcccgt ccggacgggc tgtctttttt
     2881 caaaacggct atttacatac aattacgtat gtaatataat tctgaaatcg aattgagcca
     2941 tcaggtttac aaaatcaatc aaacctgcct tacaaaattt tcctgtcttt caaaccttag
     3001 cgcatatctc ctgccaaaca tacaaaatac aagccaagca gtgatatact gcatcccaac
     3061 acagcaaacc gccgatacgc agtttcagcc gaaaggaaat gccccaaatg aataacgctt
     3121 tcgcattacc cgccatccaa agcggcaacg gcagcctcga acaatacatc cacaccgtca
     3181 acagcatccc gatgctgtcc caggaagaag aaacccgcct cgccgaacgc cggataaagg
     3241 gcgacctcaa cgccgccaaa caactcatcc tgtcccacct gcgcgtcgtc gtttccatcg
     3301 cgcgcggcta tgacggctac gggctgaatc aggcagacct gattcaggaa ggcaatatcg
     3361 gactgatgaa ggcggtcaaa cgctacgagc ccggtagagg cgcgcgtctg ttttcatttg
     3421 ccgtacactg gattaaagcc gaaatccacg agtttatttt gagaaactgg cgtttggttc
     3481 gcgttgccac caccaaaccg caacgcaagc tgtttttcaa tttacgcagt atgcgtaaaa
     3541 acctcaacgc cctgtctccc aaagaggcac aagacatcgc cgacgatttg ggtgtcaaac
     3601 tttccgaagt tctggaaatg gaacagcgca tgacgggaca cgacatcgcc atcatggcag
     3661 acaacagcga cgacgaggac agtttcgccc ccatcgactg gcttgccgac cacgattccg
     3721 aaccgagccg gcaactatcg aaacaggcgc attacgccct gcaaacagaa ggtttacaaa
     3781 acgctttggc gcaactggat gacaggagcc gccgtattgt ggaaagccgc tggcttcaag
     3841 acgacggcgg gctgacgctg caccagcttg ctgcagaata cggcgtctct gccgagcgca
     3901 tccgccagat tgaagcaaaa gccatgcaga aactgcgtgg tttcctgacc gaagaagccg
     3961 aagcggtttg aaatatacgc aataaaatac ccgacaaatt gttttgtcgg gtattttatt
     4021 tggtaaacat caatgcggtt tgtgcgtcgt gctgtacacg attttatccg tccacgccgt
     4081 tgcaattgcc gaaatcaaaa agcagacatg caccagacac tgccgcatca gctgcttttc
     4141 cgacagattg gcggaattga tatagtggat taacaaaaat caggacaagg cg
//
LOCUS       DAWGKF010000166         4183 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.166, whole genome shotgun sequence.
ACCESSION   DAWGKF010000166 DAWGKF010000000
VERSION     DAWGKF010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4183)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4183)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4183
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.166"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            230..1150
                     /gene="ribF"
                     /locus_tag="WHR07_001811"
     CDS             230..1150
                     /gene="ribF"
                     /locus_tag="WHR07_001811"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEZ2130993.1"
                     /translation="MRIRLGRHNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADT
                     RGLPVVTVVFEPQPKEFFALRTGRMPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNF
                     SEISAQGFIDRLLRQTLNTRYLLVGDDFRFGAGREGCFELLAQQPDMQTERTPSVIVE
                     DIRTSSTAVRQALSDGNLAYAKKLLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHR
                     YALGGVFVVEADGAFGTRRGVASFGFNPTVDSDCFQKLEVHLFDFQGDLYGQRLNVRF
                     LHKLRDEEKFDGMEELKRQIEADMEAAKCW"
     gene            1291..4080
                     /gene="ileS"
                     /locus_tag="WHR07_001812"
     CDS             1291..4080
                     /gene="ileS"
                     /locus_tag="WHR07_001812"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HEZ2130994.1"
                     /translation="MTDYSKTVNLLESPFPMRGNLAKREPAWLKSWYEQKRYQKLREI
                     AKGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI
                     EVMVEKLHGKDMPKARFRELCREYAAEQVACQKKDFIRLGVLGDWDKPYLTMDFKTEA
                     DTVRMLGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVGYPFKDTAA
                     LAAAFGLAGIEGKAFAVIWTTTPWTLPASQAVSAGADVVYQLIDTPKGKLVLAKDLAE
                     DALKRYGFSDGIAILAETTGDKLENLHMNHPFLERDIPMLNGDHVTTDAGTGLVHTAP
                     AHGLEDYAVCNKYGIELYNPVNAEGKYISETPRVAGMSVWEANPVILQWLEETGNLLA
                     SSKIEHSYAHCWRHKTPLIYRATGQWFVGMDKAGADGKTLRDKAIKAVDDTEFFPSWG
                     RARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAELLEKVAQRIEEKGIE
                     AWFSLDKGELLSAEDCEHYDKLSDTMDVWFDSGSTHYSVVKQREELDWPADLYLEGSD
                     QHRGWFQSSMLTGCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFG
                     ADILRLWAASTDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQA
                     DMVEIDRYAVVLARQLQERLAGDYYPRYTFHFAVKDIVSFCSEDLGAFYLDILKDRLY
                     TTKADSRARRSAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEF
                     PTINEKAEAELVKKWTAIREAREAVTAAIEPLRADKTVGSSLQAEAEITAPEEMAGYL
                     NALGEELRFALLVSKAEVKVGSELAVAAKASDGEKCERCWHYTRDVGAVAGYETVCKR
                     CAENVGREGETRHYA"
BASE COUNT         1021 a         1170 c         1112 g          880 t
ORIGIN      
        1 tttacctggt taaaaaagaa cgattttcac tgatgttgca tcaggtttgg ggcgatgttt
       61 caacacatag caccgcgcct gctgcgcgct ttatgcgttt ggcgcgttcg gctgcgggaa
      121 atttgcctac ttttcccgcg tcgggcgggc gtaacgggcg gcacactgtc tataaaccgc
      181 aataccgttt acaatgaccg cctgtttcac cacatacccg aacataacaa tgagaatcag
      241 gctggggcgg cacaacgcgc ccgactttcc gcacggggcc gccgtaacca taggcaattt
      301 tgacggcgta cacctcggac acaaacacat cctccaaaaa ctccgcctcg aagccgatac
      361 gcgcggatta cccgtcgtga ccgtcgtttt cgaaccccaa cccaaagaat ttttcgcact
      421 ccgcaccggc aggatgccac cgtgtcggat cagccccctg cgcaccaagc tcgaattatt
      481 ggaaggcaca ggctgtgtcg atgccgtctg ggttttgcgt ttcgatcaaa atttttccga
      541 aatatccgcg caagggttta tcgaccgcct gctgcgtcaa accttgaata cgcgttattt
      601 gctcgtcggc gacgatttcc gtttcggtgc ggggcgggaa ggctgttttg aacttttggc
      661 acaacagccc gatatgcaga ccgagcgtac gccttccgtc atcgtcgaag acatccgcac
      721 cagcagtacc gccgtgcgac aagccctttc agacggcaac cttgcctatg cgaaaaaact
      781 tttgggacac gactacgtct tgagcggcag ggtggtgcac ggcagaaaac tcggacgcac
      841 cttaaacgcc ccgactgcca acatccgcct gccccgccac cgttatgcac tcggcggcgt
      901 gttcgtcgtc gaagcggacg gcgcgttcgg cacgcggcgc ggcgtggcga gcttcggctt
      961 caatcccacc gttgatagcg actgttttca aaagctggaa gtccacctgt tcgactttca
     1021 aggcgatttg tacggacaac ggttgaacgt ccgcttcctg cacaaactgc gcgatgagga
     1081 aaagtttgac ggtatggaag aactgaaaag gcagattgaa gccgatatgg aagccgcaaa
     1141 gtgttggtag aaaaacctta tacaaaccat ccgattgggc tacaatcaac cttttaactg
     1201 ttcagacggc ataggggttt cccgttgtga aatactgttt gaggcgcaat gccgtctgaa
     1261 ccgaaatatt gtaacaatag agattaaaaa atgaccgatt acagcaaaac cgtaaacctg
     1321 ctcgaaagcc cgtttccgat gcgcggcaat cttgccaagc gcgagcctgc atggctgaaa
     1381 agctggtacg agcaaaaacg ctaccaaaaa ctgcgcgaaa tcgccaaagg tcgtccgaag
     1441 ttcatcctgc acgacggccc gccgtatgcc aacggcgaca tccacatcgg tcacgccgtc
     1501 aacaaaattc tcaaagacat cattatccgc agcaaaaccc aagccggttt tgacgcgcct
     1561 tatgtgccgg gttgggactg tcacggtttg cctatcgaag tgatggtaga aaagctgcac
     1621 ggcaaagaca tgcccaaagc gcgtttccgc gaattgtgcc gcgaatatgc cgccgaacaa
     1681 gttgcctgcc agaaaaaaga cttcatccgt ctgggcgtgt tgggcgactg ggacaagccc
     1741 tacctgacca tggattttaa aaccgaagcc gataccgtgc gtatgctcgg cgaaatctac
     1801 aaatccggct atctctaccg cggcgcgaaa ccggttcagt tctgcttgga ctgcggctct
     1861 tcattggccg aagccgaagt ggaatacaaa gacaaagtat cgcctgcgat tgacgtgggc
     1921 tatccgttta aagacaccgc tgcgcttgcc gctgcattcg gtttggcagg catcgagggc
     1981 aaagcgtttg ccgtcatctg gacgaccacg ccttggacgc tgccagcgag ccaagccgtg
     2041 tctgccggtg cggacgtggt gtatcaatta atcgatacgc ccaaaggcaa attggtgctg
     2101 gcgaaagatt tggcagaaga cgcgctcaaa cgttacggtt tttcagacgg cattgctatt
     2161 cttgccgaaa ccaccggcga caagctggaa aacctgcaca tgaatcatcc gttcctcgaa
     2221 cgcgatattc ccatgctcaa cggcgaccac gttaccaccg acgccggtac cggtttggtg
     2281 catactgcgc ctgctcatgg tttggaagac tacgccgtct gcaataaata cggcatcgag
     2341 ctttacaacc ccgtcaacgc cgaaggcaaa tacatcagtg aaacgccgcg cgttgccggc
     2401 atgagcgttt gggaggccaa tcccgttatc ctgcaatggt tggaagaaac cggcaacctc
     2461 ttggcaagca gcaaaatcga acacagctac gcgcactgct ggcgtcacaa aacgccgttg
     2521 atttaccgtg cgaccggcca atggtttgtc ggtatggata aagcaggtgc cgatggtaaa
     2581 accctgcgcg ataaagccat caaagccgtt gatgacactg aatttttccc atcatggggt
     2641 cgtgcgcgtt tggaagccat gattgaaggc cgccccgact gggtggtttc gcgccaacgc
     2701 tattggggca cgccgatgac tttctttgtt cacaaagaaa cgggcgagct gcatccgaac
     2761 tctgccgaac ttttggaaaa agtcgcgcaa cgcatcgaag aaaaaggcat cgaggcttgg
     2821 ttctccctcg ataagggcga attgttgagc gcggaagatt gcgaacatta cgacaaactc
     2881 tccgacacga tggacgtatg gttcgactcc ggttcgaccc attattccgt tgtgaaacag
     2941 cgcgaagaat tggactggcc tgctgacttg tacctcgaag gcagcgatca acaccggggc
     3001 tggtttcagt cgtccatgct gaccggctgc gcctcatcaa tgggtcgcgc gccgtacaaa
     3061 cagctgctga cccatggttt cgtggtggat caaaacgggc gcaaaatgtc gaaatccatc
     3121 ggcaacgtcg tcgcgccgca agaagtgtat aacgagttcg gcgcggacat cctgcgcctg
     3181 tgggcggcat ccaccgatta cagcggcgaa ttggcgattt ccaaagaaat cctcaagcgc
     3241 gtaaccgaaa gctaccgccg tatccgcaac accttgagct tcctgtttgc caacctcagc
     3301 gacttcaatc ctattgaaga tgccgtgcaa caggcagaca tggtggaaat cgaccgctac
     3361 gccgtggtat tggcacgtca gctgcaagag cgtctggcag gcgattacta tccgcgctat
     3421 accttccact ttgctgtaaa agacattgtt tctttctgct cggaagactt gggcgcgttc
     3481 tacctcgata tcctgaaaga ccgcctctac accaccaaag ccgacagccg cgcccgccgc
     3541 agcgcgcaaa ccgccctgta ccacatcacg cgcagtttgg ttctcttgat tgcgccgatt
     3601 ttgtgcttta ccggcgaaga agcgtgggac atcatcggcg gcggcgaaga agacagcgtc
     3661 ctcttccaca cctggcacga gttcccgacc atcaacgaaa aagccgaagc cgaactggtg
     3721 aaaaaatgga cggcaatccg cgaagcccgc gaagcggtaa ccgccgccat cgagcctttg
     3781 cgcgccgaca aaaccgtcgg ttcgtccttg caagccgaag ccgaaatcac tgcgccggaa
     3841 gaaatggccg gctacctgaa cgctttgggc gaagaattgc gctttgcctt gctggtgtct
     3901 aaagcagaag tgaaagtagg cagcgaactt gccgttgccg ctaaagccag tgatggtgaa
     3961 aaatgcgaac gctgctggca ctacacccgc gatgtgggcg cggttgcagg ctatgaaacc
     4021 gtctgcaaac gctgtgcaga gaatgtcggc agagaaggcg aaacgcgcca ttacgcctga
     4081 taaagtttga gcaaatgccg tctgaaaccg ccgaacagca tttcagacgg cattttttgt
     4141 gccgcaattt gtctttataa cggcggaggg gtttcaagat tgc
//
LOCUS       DAWGKF010000167         4175 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.167, whole genome shotgun sequence.
ACCESSION   DAWGKF010000167 DAWGKF010000000
VERSION     DAWGKF010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4175)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4175)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4175
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.167"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            38..461
                     /locus_tag="WHR07_001813"
                     /pseudo
     CDS             38..461
                     /locus_tag="WHR07_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221878.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            567..1130
                     /gene="pgsA"
                     /locus_tag="WHR07_001814"
     CDS             567..1130
                     /gene="pgsA"
                     /locus_tag="WHR07_001814"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEZ2130995.1"
                     /translation="MPWNLPIFLTWLRVLLIPVMTALFYLPFPWFAEETINLTAAVIF
                     AVAALTDWFDGFLARLWKQTSDFGAFLDPVADKLMVAVSLLLLVKLDRTYVLFAMIII
                     GREITISALREWMAQMGKRNSVAVATVGKFKTAAQMLAIFLLLLNIPDFYGFNLVVIG
                     NVLMFIASLLTVWSMLYYLKMAWKEIA"
     gene            1210..1285
                     /locus_tag="WHR07_001815"
     tRNA            1210..1285
                     /locus_tag="WHR07_001815"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1243..1245,aa:Gly,seq:gcc)
     gene            1311..1386
                     /locus_tag="WHR07_001816"
     tRNA            1311..1386
                     /locus_tag="WHR07_001816"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1344..1346,aa:Gly,seq:gcc)
     gene            1410..1485
                     /locus_tag="WHR07_001817"
     tRNA            1410..1485
                     /locus_tag="WHR07_001817"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1443..1445,aa:Gly,seq:gcc)
     gene            1507..1582
                     /locus_tag="WHR07_001818"
     tRNA            1507..1582
                     /locus_tag="WHR07_001818"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1540..1542,aa:Gly,seq:gcc)
     gene            1608..1681
                     /locus_tag="WHR07_001819"
     tRNA            1608..1681
                     /locus_tag="WHR07_001819"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1640..1642,aa:Cys,seq:gca)
     gene            1784..1873
                     /locus_tag="WHR07_001820"
     tRNA            1784..1873
                     /locus_tag="WHR07_001820"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1818..1820,aa:Leu,seq:taa)
     gene            1977..3029
                     /gene="sohB"
                     /locus_tag="WHR07_001821"
     CDS             1977..3029
                     /gene="sohB"
                     /locus_tag="WHR07_001821"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HEZ2130996.1"
                     /translation="MWKEILLNYGIFLLELLTVFGAIALIVLAIVQSKKQSESGSVVL
                     TDFSENYKKQRQSFEAFFLSGEEAKHQEKEEKKKEKAEAKAEKKRLKEGGEKSSETQK
                     SRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDEVLLRLESPGGVVHGYGLAASQL
                     RRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEVPNIHRLLKK
                     HDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENRPQLDIEEV
                     ATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVKYQEKQSLIQRIGLQAEAS
                     VEKLFAKLVNRRADVM"
     gene            complement(3080..3943)
                     /locus_tag="WHR07_001822"
     CDS             complement(3080..3943)
                     /locus_tag="WHR07_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter six-transmembrane
                     domain-containing protein"
                     /protein_id="HEZ2130997.1"
                     /translation="MENVETHSQNHRKRLIGTFFLVGLENLLMLVYPVFGGWAINAVI
                     AGQAWQALLYALVVLLMWLVGAARRIADTRTFTRIYTEIAVPVVLEQRQRQVPHSAVT
                     ARVALSREFVSFFEEHLPIAATSVVSIFGACIMLLVLEFWVGVSAVGILALFLWLLPR
                     FAAISENLYFRLKNSLERDNHFIRKGDERQLDRHYGLLARLRVLISNREAFGYLCVGT
                     AMGILFGFAFVMMTLKGYSSAGHVYSVGTYLWMFAMSLDDVPRLVEQYSNLKDIGQRI
                     EWSKRNIKAGT"
     gene            complement(3956..4075)
                     /locus_tag="WHR07_001823"
     CDS             complement(3956..4075)
                     /locus_tag="WHR07_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEZ2130998.1"
                     /translation="MQRSHKVFATFGDKRTTRLFADLDALAEVMEKTISENKK"
BASE COUNT         1052 a         1006 c         1070 g         1047 t
ORIGIN      
        1 tcgctgggta tggtttgccg ccataagctg tctgctgttg tccgccgttt ttattgcacc
       61 ttacctgacg gcatttcacg aacaagaaaa aacattcgaa tatgcggaat tgaccgttac
      121 cgcccccaac cgcagcggac gggcaatcaa actggatgca gacgggcagc attaccggct
      181 ttcctgctat gggttcgaca gtttgtgcac aggcggcaat atcggcagaa ccatcagggc
      241 ggagcaggtt agagccgttt taagcgaaac cgtcggcaaa ggttttttaa acggcgttct
      301 gttggaatac cgcaacagtg gcagtgtcta taagcaataa agattttgcc cgcacggaag
      361 accgccttgt cgaagtgttg gcacaacctg ccgttttctg cctgaaactg ggtattttgc
      421 ttttattgcc cgccattttc ctgcgtttga aaagaatgtg aaaacagatt ggcggggcgg
      481 gggaatgccc atgcagcaat tttacgtttt gggttatgag gataaccgtt ataatcacaa
      541 ctttacagtc tgcacagaga aaaccgatgc cttggaatct ccctatcttc ctcacatggt
      601 tgagggtctt gctcattcct gtcatgacag ccctttttta cctgcctttt ccgtggttcg
      661 cggaggaaac gattaatctc accgccgccg tcatttttgc cgttgccgcc ttaaccgact
      721 ggtttgacgg atttttggca agactgtgga aacaaacttc cgatttcggc gccttcctcg
      781 atcccgtcgc cgacaagctg atggttgccg tatcgctact tttactggtc aaactcgacc
      841 ggacctatgt tttgtttgcc atgatcatta tcggcaggga aattaccatt tccgcattgc
      901 gcgaatggat ggcgcaaatg ggcaaaagga acagcgttgc cgtcgccacc gtcggtaagt
      961 tcaaaaccgc cgcgcaaatg ctggcaattt tcctgctgct gctgaatatt cccgattttt
     1021 acggatttaa tcttgttgtt atcggcaatg tattgatgtt tatcgcatct ttgctgacag
     1081 tctggtcgat gctgtattat ctgaaaatgg cgtggaaaga aatcgcctga aaaaaacata
     1141 aaaatagctt gacggcaaaa acagaatcca taataattgc gtctcttcga tgttggagaa
     1201 tgaaatcggg cgggaatagc tcagttggta gagcgcaacc ttgccaaggt tgaggtcgcg
     1261 agttcgagac tcgtttcccg ctccaaaaat ttcattttcc cacaatcatt gcgggaatag
     1321 ctcagttggt agagcgcaac cttgccaagg ttgaggtcgc gagttcgaga ctcgtttccc
     1381 gctccaagtt ttatttcaaa catatcaacg cgggaatagc tcagttggta gagcgcaacc
     1441 ttgccaaggt tgaggtcgcg agttcgagac tcgttttccg ctccaaaaac cgatatgttt
     1501 gaacgcgcgg gaatagctca gttggtagag cgcaaccttg ccaaggttga ggtcgcgagt
     1561 tcgagactcg tttcccgctc caagtttttt agataagcca gttttagggc gagatagcaa
     1621 agtggttatg cagcggattg caaatccgtc tacgccggtt cgattccgac tctcgcctcc
     1681 attatcgtac tacggcgggg tggcagagtg tttatgctat gaggagtgca atcttcatat
     1741 aggccggtta aaatccgcgc ccccgcctcc acctttcaca aatgcccggg tggtgaaata
     1801 ggtagacaca acggacttaa aatccgtcgg gactaaacat cccgtgccgg ttcgattccg
     1861 gctccgggca ccaagctgaa aatgacaatg ccgctccaag cggttatttt tttatctgtc
     1921 ggacggtgat ggacaatatt gacatgttca tgcctgaaca agaggaaatc caatcaatgt
     1981 ggaaagaaat tttactgaat tacggtattt tcctgctcga actgcttacc gtgttcggcg
     2041 caattgcgct gattgtgttg gctatcgtac agagtaagaa acagtcggaa agcggcagtg
     2101 tcgtactgac ggatttttcg gaaaattata aaaaacagcg gcaatcgttt gaagcattct
     2161 ttttaagcgg ggaagaggca aaacatcagg aaaaagagga aaagaaaaag gaaaaggcgg
     2221 aagccaaagc agagaaaaag cgtttgaagg agggtgggga gaaatcttcc gaaacgcaaa
     2281 aatcccgcct ttttgtgttg gattttgacg gcgatttgta tgcacacgcc gtagaatcct
     2341 tgcgtcatga gattacggcg gtgcttttga ttgccaagcc tgaagatgag gttctgctta
     2401 gattggaaag tccgggcggc gtggttcacg gttacggttt ggcggcttcg cagcttaggc
     2461 gtttgcgcga acgcaatatt ccgctgaccg tcgccgtcga taaggtggcg gcgagcggtg
     2521 gttatatgat ggcgtgtgtg gcggataaaa ttgtttccgc tccgtttgcg attgtcggtt
     2581 cggtgggtgt tgtagcggaa gtaccgaata tccaccgcct gttgaaaaaa catgatattg
     2641 atgtggatgt gatgacggcg ggcgaattta agcgcacggt tacttttatg ggtgaaaata
     2701 cggaaaaggg caaacagaaa ttccgacagg aactggagga aacgcatcag ttgttcaagc
     2761 agtttgtcag cgagaaccgc cctcaattgg atattgagga agtggcaacg ggcgagcatt
     2821 ggttcggtcg gcaggcgttg gcgttgaact tgattgacga gatttcgacc agtgatgatt
     2881 tgttgttgaa agcgtttgaa aacaaacagg ttatcgaagt gaaatatcag gagaagcaaa
     2941 gcctgatcca gcgcattggt ttgcaggcgg aagcttctgt tgaaaagttg tttgccaaac
     3001 ttgtcaaccg gcgggcggat gtgatgtagt ttgccgaacg gatggaaatg ccgtctgaag
     3061 cgtgttcaga cggcattttt caagttccgg ctttgatgtt ccgtttcgac cactctatcc
     3121 gttgtccgat gtctttcaaa ttggaatatt gttcgaccaa tcgcggcacg tcgtccaaac
     3181 tcatggcaaa catccacaga taagtgccga ccgaatagac atgccccgcg ctgctgtagc
     3241 ctttgagcgt catcatcaca aaagcaaagc cgaacaaaat acccatcgcc gtgccgacgc
     3301 agagatagcc gaaggcttcg cggttggaaa tcagcacacg caggcgcgca agcagtccgt
     3361 aatggcggtc cagctgccgc tcgtcgcctt ttcggataaa gtggttgtcg cgttccaagc
     3421 tgttcttcag gcggaaatac aggttttcgc tgatggcggc aaaacgtggc aaaagccata
     3481 aaaacaacgc aagtatgccc accgccgaca cgccgaccca aaattccagc accagcagca
     3541 tgatgcacgc gccgaatatg gatacgacgg atgtcgcggc aatcggcagg tgttcttcaa
     3601 aaaagctgac aaactcacgc gacagggcaa cccgcgcagt taccgccgaa tgcgggactt
     3661 gccgctgccg ctgttccaac acaaccggca cggcgatttc ggtataaatc cgcgtaaacg
     3721 tgcgcgtatc ggcaatccgc cgcgccgcac cgaccagcca catcaaaagc acaaccaaag
     3781 cgtacagcaa cgcctgccac gcctgccccg caatcacggc attaatcgcc cagccgccaa
     3841 acaccggata caccagcatc aaaaggtttt ccagtccgac cagaaaaaat gtgccaatca
     3901 atcgcttgcg gtggttttgg ctatgtgttt caacattttc cacatatttg cccccctatt
     3961 ttttattttc cgagattgtt ttttccatca cttcagccag tgcatccaaa tcggcaaaca
     4021 gccgggttgt gcgcttgtcg ccgaatgtgg caaatacttt gtgagacctt tgcaaaattc
     4081 ctttccctcc cgacagctga cacccaaaca caggttttcg gctgttttcg tttcaaatat
     4141 ccactaattt taccccaata cccccctaat cctcc
//
LOCUS       DAWGKF010000168         4128 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.168, whole genome shotgun sequence.
ACCESSION   DAWGKF010000168 DAWGKF010000000
VERSION     DAWGKF010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4128)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4128)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4128
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.168"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            43..675
                     /locus_tag="WHR07_001824"
     CDS             43..675
                     /locus_tag="WHR07_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HEZ2130999.1"
                     /translation="MENTNRVPEQARYDAERRQADEALAGVFPAVSIFGSARTPQNHA
                     DYAFACRLARRLSDSGIAVISGGGPGIMEAANKGAFAGKSVSVGLNIVLPHEQKPNPY
                     QDIALRFSRFAERKAVFFRYSQAYVVMPGGFGTLDELFEILTLVQTGKVPPRPIVLVG
                     KAFWSGLAEWINAQLLARGLISEGAVSLFAISDDEDEIVAYLSEHGLQTA"
     gene            747..2117
                     /gene="purB"
                     /locus_tag="WHR07_001825"
     CDS             747..2117
                     /gene="purB"
                     /locus_tag="WHR07_001825"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEZ2131000.1"
                     /translation="MINPIASLSPLDGRYAQSVEALRPIFSEYGLMKARVKVELNWLK
                     ALAAEPKIVEVPPFSAGTLAEIDTVIENFSLEDAAAVKAIEATTNHDVKAIEYWLKKR
                     FAEVPEVAAVSEFIHFACTSEDINNLSHALMLQEAREAVLLPKLAEIIEKLTAMAHDL
                     AAVPMMSRTHGQPATPTTLGKETANVVYRLQRQFKILQAQEFLGKINGAVGNYNAHMA
                     AYPDVDWETHCHNFVEIGLGLTFNPYTIQIEPHDYMAEFFQTLSRINTILIDFNRDVW
                     GYISLGYFKQKVKAGEVGSSTMPHKVNPIDFENSEGNLGMANAVLGFLAEKLPVSRWQ
                     RDLTDSTVLRNMGVGVGYAVLGFAAHLRGLNKLEPNPAALAADLDATWELLAEPIQTV
                     MRRYGVANPYEKLKDLTRGKGGITPEVLKVFIGSLEIPAEAKAKLLELTPALYVGKAE
                     ALAKRI"
     gene            2198..4066
                     /locus_tag="WHR07_001826"
     CDS             2198..4066
                     /locus_tag="WHR07_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEZ2131001.1"
                     /translation="MQAVRYRPEIDGLRAVAVLSVIIFHLNNRWLPGGFLGVDIFFVI
                     SGFLITGIILSEIQNGSFSFRDFYTRRIKRIYPAFIAAVSLASVIASQIFLYEDFNQM
                     RKTVELSAVFLSNIYLGFQQGYFDLSADENPVLHIWSLAVEEQYYLLYPLLLIFCCKK
                     TKSLRVLRNISIILFLILTATSFLPSRFYTDILNQPNTYYLSTLRFPELLAGSLLAVY
                     GQTQNGRRQTASGKRQLLSLLCFGALLACLFVIDKHNPFIPGMTLLLPCLLTALLIRS
                     MQYGTLPTRILSASPIVFVGKISYSLYLYHWIFIAFAHYITGDKQLGLPAVSAVAALT
                     AGFSLLSYYLIEQPLRKRKMTFKKAFFCLYLAPSLILVGYNLYARGILKQEHLRPLPG
                     APLAAENHFPETVLTLGDSHAGHLRGFLDYVGSREGWKAKILSLDSECLVWVDTTLAD
                     NPLCRKYRDEVEKAEAVFIAQFYDLRMGGQPVPRFEAQSFLIPGFQARFRETVKRIAA
                     VKPVYVFANNTSISRSPLREEKLKRFAANQYLRPIQAMGDIGKSNQAVFDLVKDIPNV
                     HWVDAQKYLPKNTVEIHRRYLYGDQDHLTYFGSYYMGREFHKHERLLKSSRGGALQ"
BASE COUNT          936 a         1113 c         1072 g         1007 t
ORIGIN      
        1 tttttgacgg tgtacaatcg ctgtttttga acggaggatg gaatggagaa tacaaaccgt
       61 gtgccggagc aggcacgtta tgatgccgaa cgcaggcagg cagacgaagc attggcgggc
      121 gtgtttccgg cagtcagtat cttcggcagc gcgcgcacgc cgcagaatca tgcggattat
      181 gcgttcgcct gccgtctggc gcggcggctg tcggattcgg gcattgccgt catttcgggc
      241 ggcgggccgg ggattatgga ggcggcaaac aagggcgcgt ttgcagggaa gtcggtttcg
      301 gtggggctga acatcgtttt gccgcacgag cagaaaccga atccgtatca ggacatcgcc
      361 ttgcggtttt cccgttttgc cgaacgcaag gcggtgtttt tccgctattc ccaagcatat
      421 gtcgtgatgc cgggcggctt cgggacgctg gacgaattgt ttgaaatcct gaccttggtg
      481 cagacgggca aagtgccgcc gcgtccgatt gttttggtcg gaaaggcgtt ttggtcgggc
      541 ttggcggagt ggataaacgc gcagcttttg gcgcgcgggc tgatttccga aggggcggtc
      601 tctttgtttg ccatatcgga cgatgaagac gaaatcgttg cgtatctgtc ggaacacggg
      661 cttcagacgg catagcgtcc tgagagtgat gtataattgc aaacaattta acaatttttg
      721 atgtctttcc cgaacaggat gccgaaatga tcaaccccat cgcctcgctt tcccctttag
      781 acggccgtta tgcccaatcc gttgaagcat tgcgcccgat tttttcagag tacggcctga
      841 tgaaggcgcg cgtcaaagtc gaattaaact ggctcaaagc cctggccgcc gagccgaaga
      901 ttgtcgaagt gccgcccttc agtgccggaa cgcttgccga aatcgacacg gtgattgaaa
      961 acttttcatt ggaagacgcg gccgccgtca aagccatcga agccacgacc aatcatgatg
     1021 tcaaagccat tgaatattgg ctgaaaaaac gttttgccga agtgccggaa gtcgccgccg
     1081 tgagtgagtt catccacttc gcctgcacca gcgaagacat caacaacctg tcccacgctt
     1141 taatgctgca agaagcgcgt gaggctgttt tgctgccgaa gctggccgaa atcatcgaaa
     1201 aactgaccgc tatggcgcac gaccttgccg ccgtcccgat gatgagccgc acccacggcc
     1261 agcccgccac gcccacaaca ctgggcaaag aaaccgccaa cgtcgtgtac cgcctgcaac
     1321 gccagttcaa aatccttcag gcgcaagaat tcctcggcaa aatcaacggt gcggtcggca
     1381 actacaatgc ccatatggcc gcttatcccg atgtggattg ggaaacccac tgccacaact
     1441 tcgttgaaat cggcctcggt ttgaccttca acccctatac catccaaatc gagccgcacg
     1501 actatatggc tgaattcttc caaaccctca gccgcatcaa cacgattctc atcgacttta
     1561 accgcgacgt ttggggttat atttcattgg gttacttcaa acaaaaagtc aaagcgggcg
     1621 aagtcggctc ttccacgatg ccgcacaaag tcaaccccat cgattttgaa aactccgaag
     1681 gcaacctcgg tatggcaaac gccgtattgg gttttttggc ggaaaaactg cccgtctcac
     1741 gctggcagcg cgatttgacc gacagcaccg tcttacgcaa tatgggcgtg ggcgtgggct
     1801 atgccgtgtt gggctttgcc gcccacctgc gcggtctgaa caagctcgaa cccaaccctg
     1861 ccgcgcttgc cgccgatttg gatgccactt gggagctgct cgccgagccg attcaaaccg
     1921 tgatgcgtcg ttacggcgtg gccaatcctt acgaaaagct caaagacctg acgcgcggca
     1981 aaggcggcat tacgcccgaa gtgctgaaag tcttcatcgg atcgttggaa attccggcag
     2041 aagccaaagc aaaattgctt gagctgactc ctgcactgta tgtgggcaag gctgaagcgt
     2101 tggcgaaacg gatttgagcg tttactgaaa ccgatgccgt ctgaacgcgc gttcagacgg
     2161 catttttaag ataacgggac atacgggggc gatatttatg caagctgtcc gatacaggcc
     2221 tgaaattgac ggattgcggg ccgttgccgt gctatccgtc attattttcc acctgaataa
     2281 ccgctggctg cccggagggt ttttgggggt ggacattttc tttgtcatct cgggattcct
     2341 cattaccggc atcattcttt ctgaaataca gaacggttct ttttctttcc gggattttta
     2401 tacccgcagg attaagcgga tttatcctgc ttttatcgcg gccgtgtcgc tggcttcggt
     2461 gattgcctct caaatcttcc tttacgaaga tttcaaccaa atgcggaaaa ccgtggagct
     2521 ttctgcggtt ttcttgtcca atatttatct ggggtttcag caggggtatt tcgatttgag
     2581 tgccgacgag aaccccgtac tgcatatctg gtctttggcg gtagaggaac agtattacct
     2641 cctgtatcct cttttgctga tattttgctg caaaaaaacc aaatcgctac gggtgctgcg
     2701 taacatcagc atcatcctat ttctgatttt gactgccaca tcgtttttgc caagcaggtt
     2761 ttataccgac atcctcaacc aacccaatac ttattacctt tcgacactga ggtttcccga
     2821 gctgttggca ggttcgctgc tggcggttta cgggcaaacg caaaacggca gacggcaaac
     2881 agcaagcgga aaacggcagt tgctttcatt actctgcttc ggcgcattgc ttgcctgcct
     2941 gttcgtgatt gacaaacaca atccgtttat cccgggaatg accctgctcc ttccctgcct
     3001 gctgacggca ctgcttatcc ggagtatgca atacgggaca cttccgaccc gcatcctgtc
     3061 ggcaagcccc atcgtatttg tcggcaaaat ctcttattcc ctatacctgt accattggat
     3121 ttttattgcc ttcgcccatt acattacagg cgacaaacag ctcggactgc ctgccgtatc
     3181 ggcggttgcc gcattgacgg ccggattttc cctgttgagc tattatttga ttgaacagcc
     3241 gcttagaaaa cggaagatga ccttcaaaaa ggcatttttc tgcctctatc tcgccccgtc
     3301 cctgatactt gtcggttaca acctgtacgc aagggggata ttgaaacagg aacacctccg
     3361 cccgttgccc ggcgcgcccc ttgctgcgga aaatcatttt ccggaaaccg tcctgaccct
     3421 cggcgactcg cacgccggac acctgcgggg ttttctggat tatgtcggca gccgggaagg
     3481 gtggaaagcc aaaatcctgt ccctcgattc ggagtgtttg gtttgggtgg atacgacact
     3541 ggcagacaac ccgttatgtc gaaaataccg ggatgaagtt gaaaaagccg aagccgtttt
     3601 cattgcccaa ttctatgatt tgaggatggg cggccagccc gtgccgagat ttgaagcgca
     3661 atccttccta atacccgggt tccaagcccg attcagggaa accgtcaaaa ggatagccgc
     3721 cgtcaaaccc gtctatgttt ttgcaaacaa cacatcaatc agccgttcgc ccctgaggga
     3781 ggaaaaattg aaaagatttg ccgcaaacca atatctccgc cccattcagg ctatgggcga
     3841 catcggcaag agcaatcagg cggtctttga tttggttaaa gatatcccca atgtgcattg
     3901 ggtggacgca cagaaatacc tgcctaaaaa cacggtcgaa atacacagac gctatcttta
     3961 cggcgaccaa gaccacctga cctatttcgg ttcttattat atggggcggg aatttcacaa
     4021 acacgaacgc ctgcttaaat cttcccgcgg cggcgcattg cagtagcctg ccttcttgtc
     4081 ggatattgcc tttggcagcc tatgccgctg tttgcccttc ggggcggc
//
LOCUS       DAWGKF010000169         4111 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.169, whole genome shotgun sequence.
ACCESSION   DAWGKF010000169 DAWGKF010000000
VERSION     DAWGKF010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4111)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4111)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4111
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.169"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(113..769)
                     /locus_tag="WHR07_001827"
     CDS             complement(113..769)
                     /locus_tag="WHR07_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEZ2131002.1"
                     /translation="MKNKTKVWDFPTRLFHWLLAASLPFMWYSAKTGGDMLQWHTRVG
                     LLILFLLIFRLCWGIWGSDTARFSHFVRGWSGIRDYLKNGIPEHIQPGHNPLGALMVV
                     ALLAAVSFQVGTGLFAADENTFSTNGYLNHLVSEHTGSLMRKIHLNFFKLLAVFSAIH
                     IAAVAAYRLFKKKNLVFPMITGFKYIEGKTSIHFAGKAALAAALSVVALVAAAILLLS
                     "
     gene            834..1724
                     /locus_tag="WHR07_001828"
     CDS             834..1724
                     /locus_tag="WHR07_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEZ2131003.1"
                     /translation="MFPVFHLSGESRRRMLQTALRFPYVFKARAEDSHKGTFGTLAVV
                     GGSAGMSGAPVLAASAAMYLGCGKVWAGFNQDALPFAVIAGFPEIMLDTADGLSKRQD
                     INAWVVGCGLGTGRAAVGTLAGILTEHTDKPVLLDADALNILSTDAETRNLARGCKNL
                     ILTPHPAEAARLLGTTVAQVQADRTAAVRKIGAIFGATVVLKGHKTLVAASDTEIYVN
                     ESGNAGLATAGSGDVLGGIIGSLLAQGVPVFEAACAGAWLHGAAADVIKESAGIAAGL
                     LAGEIAPAARWLRNRITESM"
     gene            1994..3805
                     /gene="typA"
                     /locus_tag="WHR07_001829"
     CDS             1994..3805
                     /gene="typA"
                     /locus_tag="WHR07_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEZ2131004.1"
                     /translation="MKQIRNIAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDS
                     NDLEKERGITILAKNTAIDYEGYHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQE
                     GPMPQTRFVTKKALALGLKPIVVINKIDKPSARPSWVIDQTFELFDNLGATDEQLDFP
                     IVYASGLSGFAKLEETDESNDMRPLFDTILKYTPAPSGSADETLQLQISQLDYDNYTG
                     RLGIGRILNGRIKPGQVVAVMNHEQQIAQGRINQLLGFKGLERVPLEEAEAGDIVIIS
                     GIEDIGIGVTITDKENPKGLPMLSVDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRL
                     QKELLTNVALRVEDTADADVFRVSGRGELHLTILLENMRREGYELAVGKPRVVYRDID
                     GQKCEPYENLTVDVPDDNQGAVMEELGRRRGELTNMESDGNGRTRLEYHIPARGLIGF
                     QGEFMTLTRGVGLMSHVFDDYAPVKPDMPGRHNGVLVSQEQGEAVAYALWNLEDRGRM
                     FVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKLTNVRASGTDEAVRLTTPIKLTLEGA
                     VEFIDDDELVEITPQSIRLRKRYLSELERRRHFKKLD"
BASE COUNT          995 a         1069 c         1186 g          861 t
ORIGIN      
        1 gtttgggacg gaaaaacggc ctgaagccgt ttcgggcatt cagaccgttt gcgcggagag
       61 gggatgccgt ccgaagggcg aaaagggctt cagacggcat tgatgtcggg tttcaggaca
      121 ggagcaggat ggcggctgcg acaagcgcga caaccgataa tgcggcggca agcgcggctt
      181 tgccggcaaa gtgtatggaa gttttgcctt cgatatattt gaagccggtt atcatcggga
      241 agacgaggtt tttctttttg aataggcggt atgcagcgac ggcggcgata tggatggcgg
      301 aaaaaacggc gagcagcttg aaaaagttga ggtggatttt ccgcatcagg ctgcccgtat
      361 gctcggaaac caaatggttg aggtagccgt tggtgctgaa ggtgttttca tcggcggcaa
      421 aaagccccgt gccgacttga aatgagacgg cggccaaaag cgcgacgacc atcagtgcgc
      481 ccaaggggtt gtgtccgggc tggatatgtt cgggaatacc gtttttcaga taatccctga
      541 tacccgacca tccgcggacg aaatgggaaa aacgggcggt atcactgccc caaatgcccc
      601 agcagaggcg gaatatgagc aggaaaagga taagcagccc gacgcgcgtg tgccattgca
      661 gcatatcgcc gccggttttc gcgctatacc acataaaggg tagggatgcg gcaagcagcc
      721 aatggaaaag gcgggtgggg aagtcccaga ctttggtttt gtttttcata atcggtttcc
      781 ggcggtagaa tcggtttgtt ttcgagcctt aattttaacc gattggaggg gcaatgtttc
      841 ccgtttttca tctttcaggc gagagccgcc gccggatgct tcagacggca ttgcgttttc
      901 cctatgtttt caaagcccgt gcggaagatt cgcacaaagg gactttcggc acgctcgccg
      961 tagtcggcgg atcggcaggg atgagcggtg cgcccgtatt ggcggcatcg gcggcgatgt
     1021 atctcggctg cggcaaggtg tgggcgggtt tcaatcagga tgcgctacct tttgccgtta
     1081 ttgccggttt tcccgagatt atgctggata cggcagacgg tttgagcaag cgtcaagata
     1141 taaacgcctg ggttgtcggt tgtggattgg gtacaggtag ggcggcggtc ggaacgcttg
     1201 ccggaatttt gacggaacac acggacaagc ccgtcctttt ggatgcggac gcgctgaaca
     1261 tattatcaac cgatgccgaa acccgaaatc tggcacgcgg gtgtaaaaac ctgattttaa
     1321 cgccacaccc cgccgaagcc gcgcgcctgc ttggaacgac ggttgcacag gttcaggcgg
     1381 atcggacggc ggcagtgagg aagatagggg caattttcgg cgcaaccgtg gttttaaagg
     1441 ggcacaaaac attggttgcc gcgtccgata cggaaatcta tgtcaacgaa agtggcaacg
     1501 cgggattggc aacggcgggc agtggcgacg tattgggcgg catcatcggc agtctgctcg
     1561 cacagggcgt gccggttttt gaagccgcct gcgcgggcgc gtggctgcac ggcgcggcgg
     1621 cggatgtcat aaaagaatcg gcaggcattg cggcagggct gttggctggc gaaatcgccc
     1681 cggcggcaag gtggctgcgt aaccggataa ctgaaagtat gtaagaagat atagtggatt
     1741 aacaaaaacc agtacggcgt tgcctcgcct tagctcaaag agaacgattc tctaaggtgc
     1801 tgaagcacta agtgaatcgg ttccgtacta tccgtactgt ctgcggcttc gccgccttgt
     1861 cctgattttt gttaatccac tataccgtct gaaaggcaag ggcttcagac ggcatcttca
     1921 tttcccaaat actgtccggt aaagcgtggt ataatgcgca gttatctctt acagtttttg
     1981 aaaaacatta attatgaaac aaatccgcaa catcgccatc atcgcccacg tcgaccacgg
     2041 caaaaccaca ttggtcgacc aactgctgcg ccaatccggc acattccgcg ccaaccagca
     2101 ggttgacgag cgcgtgatgg acagcaacga cctcgaaaaa gaacgcggca tcaccatcct
     2161 cgccaaaaac accgccatcg attacgaagg ctaccacatc aatatcgtcg atacgccggg
     2221 acacgccgac ttcggcggcg aagtagagcg cgttttgggg atggtggact gcgtcgtctt
     2281 gttggtggat gcgcaagaag gtccgatgcc gcaaacccgt ttcgtgacca aaaaagcctt
     2341 ggctttgggg ctgaaaccga ttgtcgtcat caacaaaatc gataaaccgt ccgcccgtcc
     2401 gagctgggtc atcgaccaaa ctttcgaact cttcgacaac ttgggcgcaa ctgacgaaca
     2461 gttggacttc ccgattgttt acgcttcagg tttgagcggc tttgccaagc tggaagaaac
     2521 cgacgagagc aacgacatgc gtccgctgtt cgacaccatc ctaaaataca cgcccgcacc
     2581 gagcggcagc gcggacgaaa cgctgcaact gcaaatctcc caactcgact acgataacta
     2641 caccggccgc ctcggcatcg gtcgtatctt gaacggacgt atcaagcccg gtcaagttgt
     2701 tgccgtgatg aaccacgagc agcaaatcgc ccaaggccgc atcaaccagc ttttgggttt
     2761 caaaggcttg gaacgcgtgc cgcttgaaga agccgaagca ggcgacatcg tgattatttc
     2821 cggtatcgaa gacatcggta tcggcgtaac catcaccgac aaggaaaatc ccaaaggtct
     2881 gccgatgttg agcgtagacg aaccgacgct gaccatggac tttatggtga acaccagccc
     2941 actcgcgggt actgaaggca aattcgtaac cagccgccaa atccgcgacc gcctgcaaaa
     3001 agaattgctg accaacgttg ccctgcgcgt ggaagatacc gccgatgccg acgtgttccg
     3061 cgtatccggg cgcggcgaac tgcacctgac cattttgttg gaaaatatgc gccgcgaagg
     3121 ctacgaactc gccgtcggca agccgcgcgt cgtgtaccgc gacatcgacg gtcaaaaatg
     3181 cgaaccttat gaaaacctga ccgtggacgt acccgacgac aaccaaggcg cggtaatgga
     3241 agaactcggc cgccgccgtg gcgaactgac caatatggaa agcgatggca acggacgcac
     3301 ccgcctcgaa taccatattc cagcgcgcgg cttgatcggt ttccaaggcg aatttatgac
     3361 cctgacgcgc ggggtcgggc tgatgagcca cgtgttcgac gattacgcgc ccgtcaaacc
     3421 cgatatgccc ggccgccaca acggcgtgct ggtgtcccaa gagcagggcg aggcagtcgc
     3481 ttacgccttg tggaatctgg aagaccgcgg ccgtatgttc gtatcgccca acgacaaaat
     3541 ctacgaaggt atgattatcg gtatccacag tcgcgacaac gatttggtgg tcaacccgct
     3601 caaaggcaaa aaacttacca acgtccgtgc cagcggtacc gacgaagccg ttcgcctgac
     3661 cacgccgatt aaactgacgc tggaaggtgc ggttgagttt atcgacgatg acgaactcgt
     3721 tgaaatcacg ccgcaatcca tccgtctgcg caagcgttac ttgagcgaat tggaacgccg
     3781 ccgccacttt aaaaagctgg attgatgttt actggattaa tgtttaaatg atacgcgatg
     3841 ccgtctgaaa aatttcagac ggcatttttt attcggacgg gctttgcggc ttcttgaagc
     3901 tgtttcagac ggcgtttttc ctacccaatc aagaaactgc cgccattttt ccagcggtat
     3961 atcgccccgt cgcgtttcgg tatcgggttc ggcttcccgg cagcatgtcg aacaatgccg
     4021 tttgaaggaa tacgcctttt gagtccttac aagcttagga agaggatata gtggattaac
     4081 aaaaatcagg acaaggcgac gaagccgcag a
//
LOCUS       DAWGKF010000170         4050 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.170, whole genome shotgun sequence.
ACCESSION   DAWGKF010000170 DAWGKF010000000
VERSION     DAWGKF010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4050)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4050)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4050
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.170"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(154..1050)
                     /gene="argB"
                     /locus_tag="WHR07_001830"
     CDS             complement(154..1050)
                     /gene="argB"
                     /locus_tag="WHR07_001830"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEZ2131005.1"
                     /translation="MESENIISAADKARILAEALPYIRRFSGSVAVIKYGGNAMTEPA
                     LKEGFARDVVLLKLVGIHPVIVHGGGPQINAMLEKVGKKGEFVQGMRVTDKEAMDIVE
                     MVLGGHVNKEIVSMINTYGGHAVGVSGRDDHFIKAKKLLIDTPEQNGVDIGQVGTVES
                     IDTGLVKGLIERGCIPVVAPVGVGEKGEAFNINADLVAGKLAEELNAEKLLMMTNIAG
                     VMDKTGNLLTKLTPKRIDELIADGTLYGGMLPKIASAVEAAVNGVKATHIIDGRVPNA
                     LLLEIFTDAGIGSMILGGGEDA"
     gene            1220..2350
                     /locus_tag="WHR07_001831"
     CDS             1220..2350
                     /locus_tag="WHR07_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase family protein"
                     /protein_id="HEZ2131006.1"
                     /translation="MIKISTRFDAGSVVVKDLTDPSNIRLALRPDNASDFAQWFYFRL
                     QGAAYQNCIMHFDNAAEAAYPKGWEGYQACASYDRRNWFRVPTSYENGVLTVNHTPLS
                     NSVYYAYFEPYSEEQHLNLLGDAQGSGLCRIDDLGSTVQGRDINLLTIGNQVESDLKI
                     WITARQHPGETMAEWFVEGLLGRLLDHQDATARTLLDRATFYIVPNMNPDGSALGNLR
                     TNAAGVNLNREWENPTVEKSPEVFFVRERMLETGVDLFLDIHGDEGLPFVFVAGTEGV
                     PNYNPRISALETQFKTALLNASPDFQDEYGYEKDAPGQANVTLATNWVGNRFNCLAYT
                     LEMPFKDNANLPDDDFGWNGQRSLRLGEAVLSAILNVAGDLR"
     gene            2423..3274
                     /locus_tag="WHR07_001832"
     CDS             2423..3274
                     /locus_tag="WHR07_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEZ2131007.1"
                     /translation="MIIHPQFDPVLISIGPLAVRWYALSYILGFILFTFLGRRRIAQG
                     LSVFTKESLDDFLTWGILGVILGGRLGYVLFYKFSDYLAHPLDIFKVWEGGMSFHGGF
                     LGVVIAIWLFGRKHGIGFLKLMDTVAPLVPLGLASGRIGNFINGELWGRVTDINAFWA
                     MGFPQARYEDAEAAAHNPLWAEWLQQYGMLPRHPSQLYQFALEGICLFAVVWLFSKKQ
                     RPTGQVASLFLGGYGIFRFIAEFARQPDDYLGLLTLGLSMGQWLSVPMIVLGIVGFVR
                     FGMKKQH"
     gene            complement(3357..4019)
                     /locus_tag="WHR07_001833"
     CDS             complement(3357..4019)
                     /locus_tag="WHR07_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YecA family protein"
                     /protein_id="HEZ2131008.1"
                     /translation="MDSQKFTEASKRRLSELLDAKSEQGNTMRCDEVQGFMTALLSGP
                     DKLTPLDWLPEVLGDESQFTAAERSEIERLVLAMAMETTAAMSDKKLPDLWLYENEDG
                     GSDFYTWCNAYLYGLDIVPTDWFEAVDDEAFEELFYPIMALGGIYDEEDNGTIRLQFT
                     EGELAELESELPYALADIYRYWQAVINKPQTVRREGEKTGRNDPCPCGSGRKYKACCG
                     KN"
BASE COUNT          878 a         1188 c          993 g          991 t
ORIGIN      
        1 ccagattccc gccttcgcgg gaatgacgga ttttaggttt ctgttttggt ttctgttttc
       61 gcgggaataa caacttagaa attgcccgaa accccaaaaa cagaaaccgg acaaacgggt
      121 tttccgccaa agccggcatt ttccgacttt gcttcaggca tcttccccac cgcccaaaat
      181 catcgaaccg ataccggcat cggtaaagat ttccagcaaa agcgcgttgg gcaccctgcc
      241 gtcgatgata tgcgtggctt tcacgccgtt gacggcggct tcgaccgcag aagcgatttt
      301 cggcagcata ccgccataca gcgtgccgtc ggcaatcagt tcatcaatcc gtttcggcgt
      361 gagtttggtc agcagattgc ccgttttgtc catcacaccg gcgatattcg tcatcatcaa
      421 gagtttttcg gcgttcaatt cttccgccaa tttgcctgct accaaatcgg cgttgatgtt
      481 gaacgcttcg cctttttcac ctacgccgac gggggcgacg acgggaatgc agccacgttc
      541 tatcagccct ttaaccaaac cggtatcgat gctttccacc gtaccgacct gtccgatgtc
      601 cacgccattc tgttcgggcg tatcgatcaa aagtttcttc gccttaatga aatgatcgtc
      661 gcgtccgctc acgccgaccg cgtgtccgcc atatgtgtta atcatcgaca cgatttcttt
      721 attgacatgc ccgcccaaca ccatttcgac aatatccatc gcctctttgt cggtaacgcg
      781 cattccttgg acaaactcac cctttttgcc gactttttca agcatcgcat tgatctgcgg
      841 cccgccgccg tgaacgatga cgggatgaat gccgaccagc ttcagcagca cgacatcgcg
      901 ggcaaaccct tctttcaagg caggttcggt catcgcgttg ccgccgtatt tgatgacggc
      961 gaccgaaccg gaaaaccggc ggatgtaagg cagcgcttcg gcaaggatac gcgccttgtc
     1021 ggcggcggaa ataatgtttt cagactccat aacggctccc tattgttgac aatttcggct
     1081 tatgttaacg ccaaacgccg tctgaaacaa tcttcagacg gcatccggca gactttcggg
     1141 caggttgaag ccttgcgata cgggcggtaa aatcgcggtt tatccggttc gagaaaccgg
     1201 cgacagcaag gactttccca tgattaaaat cagcacccgc ttcgatgccg gctcggtcgt
     1261 cgtcaaagac ctgaccgatc cttccaacat ccgcctcgcc ctgcgtcccg acaacgcctc
     1321 cgattttgca caatggttct acttccggct gcaaggcgcg gcatatcaaa actgcatcat
     1381 gcattttgac aatgcggcag aagccgccta cccgaaaggc tgggaaggct atcaggcgtg
     1441 tgcctcatac gaccgccgca actggttccg cgtaccgact tcctacgaaa acggcgtact
     1501 gaccgtcaac cataccccgc tgtccaatag cgtgtactac gcctatttcg aaccctattc
     1561 cgaagaacag cacctcaacc tcctcggcga cgcgcaaggc agcggcctgt gccgcatcga
     1621 cgacttgggc agcaccgtgc aagggcgcga catcaatctg ctgaccatag gcaaccaggt
     1681 cgaaagcgat ttgaaaatct ggattaccgc ccgccagcat ccaggcgaaa ccatggcgga
     1741 atggtttgtc gaggggctgc tcggcagact gctcgaccat caggatgcaa ccgcgcgcac
     1801 cctgctcgat cgcgccacgt tctatatcgt ccccaacatg aaccccgacg gttcggcact
     1861 gggcaacctt cgcaccaacg ccgccggtgt gaacctcaac cgcgaatggg aaaatccgac
     1921 tgtggaaaaa agccccgaag tgttcttcgt gcgtgaaaga atgctggaaa ccggcgtgga
     1981 tttgtttttg gatatccacg gcgacgaagg gttgcccttt gtctttgttg caggaactga
     2041 aggcgtgccg aactacaatc cgcgcatttc cgcgttggaa acacagttca aaaccgccct
     2101 tttgaacgcc agccccgatt tccaagatga atacggttac gaaaaagatg cgcccggtca
     2161 ggcaaacgtg accttggcaa caaactgggt cggcaaccgt ttcaactgcc ttgcctatac
     2221 gttggaaatg ccgttcaaag acaatgccaa cctgcccgac gacgacttcg ggtggaacgg
     2281 tcaacgttcg ttgcgcttgg gcgaagcggt gctttccgcc attttgaacg tcgccggcga
     2341 tttgcgttga cactccccac tgaaaaatgc cgtctgaaag cccttcccct tttcagacgg
     2401 catttgaaaa cgaaagcctg ttatgattat ccatccccaa ttcgaccccg tccttatcag
     2461 tatcggcccg cttgccgtcc gctggtatgc cctaagctac atcctcggat ttattctttt
     2521 tacctttctc ggcagaaggc gcatcgcgca aggcttgtcc gtttttacca aagaatcgct
     2581 cgacgacttc ctcacttggg gcattttggg cgtaattttg ggcgggcgtt tgggttacgt
     2641 cctgttttac aagttttccg actacctcgc ccatccgctt gatattttca aggtatggga
     2701 aggcggaatg tcgttccacg gcggcttttt gggtgtagtt attgccatat ggttgttcgg
     2761 ccgcaaacac ggcatcggct tcctcaaact gatggacacg gtcgcaccgc tcgttccgct
     2821 gggtctcgct tcgggacgta tcggcaactt catcaacggc gaactttggg gacgcgttac
     2881 cgacatcaac gcattttggg caatgggctt cccgcaggcg cgttacgaag atgccgaagc
     2941 cgccgcgcac aatccgcttt gggcagaatg gctgcaacaa tacggtatgc tgccgcgtca
     3001 tccctcgcag ctttatcagt ttgcacttga aggcatctgc ctgttcgccg tcgtttggct
     3061 gttctctaaa aaacagcggc cgaccggaca agtcgcctca ctcttcctcg gcggctacgg
     3121 catattccgc ttcattgccg aatttgcacg ccaacccgac gactatctcg ggctgctgac
     3181 cttggggctg tcgatggggc aatggttgag cgtcccgatg attgttttgg gtatcgtcgg
     3241 ctttgtccgg ttcggcatga aaaaacagca ctgaccgcct gtgaaaaata ccgtctgaaa
     3301 catggaaatc cggtttcaga cggcattttt acgtttggtt catggaaaca aacgcttcaa
     3361 ttcttaccgc aacacgcctt gtattttctg ccgctgccgc acggacaggg atcgttcctg
     3421 cctgtttttt cgccttccct gcggacggtt tgcggcttgt tgatgaccgc ctgccagtag
     3481 cggtagatat ccgccaatgc ataaggcaac tcggattcca gttccgccag ctcgccttct
     3541 gtgaattgca gacggatagt gccgttgtcc tcttcgtcgt aaataccgcc caatgccatg
     3601 atgggataaa acaactcttc aaacgcttca tcatcgacgg cttcaaacca atcggtcggc
     3661 acaatatcca aaccgtaaag ataagcattg caccatgtgt aaaaatcgct gccgccgtct
     3721 tcgttttcat acagccacaa atcgggcagt tttttatccg acatcgcggc ggttgtttcc
     3781 atcgccattg ccaaaaccag ccgttcgatt tcggaacgtt cggcggcggt aaattgcgat
     3841 tcgtcgccca acacttcggg cagccagtcg agcggtgtca atttgtccgg cccgctcaac
     3901 agcgccgtca taaaaccttg aacctcgtcg caacgcatcg tgttgccttg ttcgcttttg
     3961 gcatccaaca attcgctcaa ccgccgtttg gatgcttcgg taaatttttg ggaatccatc
     4021 attttccttt tcaaatgggt tttgcgccct
//
LOCUS       DAWGKF010000171         4039 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.171, whole genome shotgun sequence.
ACCESSION   DAWGKF010000171 DAWGKF010000000
VERSION     DAWGKF010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4039)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4039)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4039
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.171"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(91..465)
                     /locus_tag="WHR07_001834"
                     /pseudo
     CDS             complement(91..465)
                     /locus_tag="WHR07_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709227.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(638..994)
                     /locus_tag="WHR07_001835"
     CDS             complement(638..994)
                     /locus_tag="WHR07_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mimic protein"
                     /protein_id="HEZ2131009.1"
                     /translation="MNEHNLLIFCLKDNVSISEYTEMIDWAYKNIQSETVVEITESQI
                     IEYQNRGLWRLVSEITDNWLFGPSEGDWLIDKESILAVKEKLQNSDFSTEPLVKNIIH
                     VLEYAIKNEKTVIFHF"
     gene            complement(1056..1172)
                     /locus_tag="WHR07_001836"
                     /pseudo
     CDS             complement(1056..1172)
                     /locus_tag="WHR07_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235291.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(1259..1471)
                     /locus_tag="WHR07_001837"
     CDS             complement(1259..1471)
                     /locus_tag="WHR07_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131010.1"
                     /translation="MKLINFEESSVKISLDKDELYIIQAIVGEIYSGVCVDCRDFEII
                     HGVEKIKFFLWIKNLKKYMILGINVS"
     gene            complement(1547..1906)
                     /locus_tag="WHR07_001838"
     CDS             complement(1547..1906)
                     /locus_tag="WHR07_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HEZ2131011.1"
                     /translation="MRLKLKNYDCSDFDLEDFPQDKLENFCILLTLSIGFDESNGADY
                     FYVYIYSTEWLLSNIHRPMSLKNSIVTNRFNIEHILKLINDILEICNSTSEDKSISNL
                     AKYFDWEFDDYNLNIQD"
     gene            complement(1903..2121)
                     /locus_tag="WHR07_001839"
     CDS             complement(1903..2121)
                     /locus_tag="WHR07_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131012.1"
                     /translation="MMTESHGYLSNNLPVKIINDIIYATQLVEDLVLGKIKIVDFLKS
                     YNNFYCWLGFDELPQSEKIKFLSYLNIL"
     gene            complement(2142..2348)
                     /locus_tag="WHR07_001840"
     CDS             complement(2142..2348)
                     /locus_tag="WHR07_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131013.1"
                     /translation="MMENSKKTWEIDGEIWLHCPVCGTEVMDYDICDVCQWQNTGETN
                     IDGGPNEMTLAEAKEAYAKDLPIR"
     gene            complement(2314..2514)
                     /locus_tag="WHR07_001841"
     CDS             complement(2314..2514)
                     /locus_tag="WHR07_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131014.1"
                     /translation="MASDLLSKQTSDKILGYQTEHRRVRYDINNNIYVLANPKTFKIK
                     TMFKPNLGKKYYDGEFKKDMGN"
     gene            complement(2874..3218)
                     /locus_tag="WHR07_001842"
     CDS             complement(2874..3218)
                     /locus_tag="WHR07_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131015.1"
                     /translation="MIIEHNGNIHKIARMTGNKNNFLEIILSDIHENIKIKPLTIKVK
                     GENVINILPEEVSFYVKQGVDLIYEKYKRKFFISEISFCQSDSRPSSIYAFLTFHLLE
                     DIIKNESPSNYT"
     gene            complement(3256..3579)
                     /locus_tag="WHR07_001843"
     CDS             complement(3256..3579)
                     /locus_tag="WHR07_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131016.1"
                     /translation="MFLDDVNVFLDDLNTNPITDEWYMSNFADKHIKILESYEAFDIL
                     KQFVDYMIEEYDEKSEYEIMEILRQLKYQADTNEKFYTNTQKQKIVELYKQEISQDIL
                     NEIFR"
     gene            complement(3582..3812)
                     /locus_tag="WHR07_001844"
     CDS             complement(3582..3812)
                     /locus_tag="WHR07_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mafB"
                     /protein_id="HEZ2131017.1"
                     /translation="MEEVKANPQGKTPARIPPMSDTKNGWLAKDGWVKRVQNVNKIEI
                     HYIENTRTGEKTDFKFIENTRTGEKTDFKFKD"
     gene            complement(3891..4039)
                     /locus_tag="WHR07_001845"
                     /pseudo
     CDS             complement(3891..4039)
                     /locus_tag="WHR07_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235291.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
BASE COUNT         1199 a          726 c          575 g         1539 t
ORIGIN      
        1 ataaaagttc ttgttccatt ttaaaacaat tagtaaaatc gagtttatcc tagttgtcca
       61 gggcagcctc atctctttat agatagctgc ttaccaagta tccttaattg ctaattcaag
      121 ccaatcttca aaactattaa aaaattcatg gttttctata ttatctaaat taatgacaat
      181 aaccctagaa tttcctgtta catcattacc atcaaaataa gcttcccatt ctccattact
      241 agcgaatggg ataagattta aatcaggcag gatagaattt ctaaatatat aagctacttc
      301 tgccccttct gttccataat tctcaaacta ccagtgaaaa ttatgtggct gaatataagg
      361 tattaaagat gtatcgttag agatacgaac atacttttca ggataacaaa acctttcagg
      421 aagcatatta ctaggatata aattaaattc attttgaata atcatttcgt taccttagga
      481 tcataaatac taccattagg aaactgggta gaccaatttg gtggtgctag ttcattttca
      541 atttgttttt taattctaaa ttgaatagct tctccccatg tttgcggcat ctaatgctgc
      601 ttgctctgca tcaatattac taaaaattgg attagtctca aaaatgaaaa attactgttt
      661 tttcattttt tatagcatat tcaagtacat gaataatatt tttcactaag ggctctgtag
      721 aaaaatctga attttgtaat ttttctttta cagccaaaat actttcctta tctattagcc
      781 aatccccctc acttggtcca aataaccaat tatcggtaat ttcagaaaca agtctccata
      841 atccacgatt ttgatattca ataatttgac tttccgtaat ttctacaact gtttcagatt
      901 gaatgttttt ataagcccaa tcaatcattt cagtatattc actaattgaa acattgtctt
      961 ttaaacagaa aattaacagg ttgtgttcat tcatttgtct aagttcttaa tatgagtttg
     1021 ttgttgtaaa taatcttttg cttgcttacc ttgtaaatta aaggattaac cgcaccttgg
     1081 atgatgccgc gaatatcatc catacggtta gcccaccaat ttttattggg gtcgttttcc
     1141 catatcagtt ttcctgcttc atcagcacaa ttagggttgg cattgatgcc cacccagttc
     1201 cagcctgaaa aggattttta atatacggca aaaggtgggc aacaagtgcc caccttacct
     1261 agctaacatt tatcccaagt atcatatatt tttttaagtt ctttatccaa agaaagaact
     1321 ttattttttc aacaccatga attatctcaa aatctctaca atccacgcat acgcctgaat
     1381 aaatttctcc tacaattgct tgaataatat acaactcatc tttatcgaga ctaattttaa
     1441 ctgaactctc ttcaaaatta attaatttca tgaataattc cttttatttt aattcgtcat
     1501 caaaataccg tttgcctgtt tttggtctaa atgctgtcca ccatctttag tcttggatat
     1561 ttagattata atcgtcaaat tcccagtcaa aatattttgc caaatttgat atagacttat
     1621 cttcagacgt tgaattacat atttccaata tatcatttat caattttaat atgtgttcaa
     1681 tattaaaacg gtttgtaaca attgagtttt ttaatgacat cggtctatgt atatttgaaa
     1741 gtaaccattc ggtgctatat atataaacat aaaaataatc agcaccatta ctttcatcaa
     1801 aacctattga taatgtcaaa agtatacaaa aattttctaa cttgtcttgt gggaaatctt
     1861 ccaaatcaaa gtcagaacaa tcataatttt ttaattttaa tctcataata tattgagata
     1921 gcttaggaat tttattttct cagattgagg caactcatca aaaccaagcc aacaataaaa
     1981 attgttatat gattttaaaa aatcaacaat ttttattttt cctaaaacca aatcttcgac
     2041 taactgggtt gcataaataa tatcatttat gattttaaca ggtaaattat ttgataggta
     2101 accatgggat tccgtcatca ttgatttctc taggtgctta tttatctgat tggtaagtct
     2161 tttgcgtaag cttctttcgc ctccgcaagt gtcatttcat tagggccacc atctatatta
     2221 gtttctcctg tattttgcca ctgacaaacg tcacagatat catagtccat aacttcagtt
     2281 ccgcaaacag gacaatgtag ccatatttct ccgtcaattt cccatgtctt ttttgaattc
     2341 tccatcataa tacttctttc ctaagtttgg tttaaacatt gttttgattt tgaatgtttt
     2401 tggattggcc aaaacataga tattgttatt gatatcatag cgcactcgtc tatgttccgt
     2461 ctgataacct aatatcttgt ccgatgtctg ttttgataac aaatcagacg ccattttttg
     2521 gtagtcttca atggttatat cgccaaattc ttttccatga gctttgaaat gtccatttaa
     2581 agatttctca gtaggaaact tggactttgt ccatctgatg cggtcttgaa ttgttcctgt
     2641 cggagaaata gatgtatcag gtttaacata tgaggcaggt aagccgatat tgttatcaga
     2701 gtgtgtaggg tgttgctgcg tacttggttt tggtggctta ttcccacctg ccatctcccc
     2761 atctaaagtc tgcatagggc gggcagtagg tgttttatag ccggtatttt taacccaatc
     2821 ccatttggtc gggttaagtt ctactttttt accgccccaa accgtacctc cagtcaggtg
     2881 tagttggatg gggattcatt tttaataata tcttcaagca agtgaaatgt aagaaaagcg
     2941 tagatacttg aaggccggct atctgattgg caaaaagaaa tttcggagat aaagaatttc
     3001 cgtttatatt tttcataaat taaatcaaca ccttgtttta cataaaaact aacttcctca
     3061 ggaaggatat ttataacatt ctctcctttt acttttatag ttaatggttt gatttttatg
     3121 ttttcatgaa tatctgatag gattatttct aaaaaattat ttttatttcc agtcattctg
     3181 gctattttat gtatatttcc attgtgttcg attatcattt tattttttcc aaggatttcc
     3241 ttctatattg atagtttatc taaagatttc atttaaaata tcctgactaa tttcttgttt
     3301 atataattct acaattttct gtttctgtgt atttgtataa aatttttcgt tggtatctgc
     3361 ttgatatttt aattgtctca atatttccat gatttcatat tctgattttt catcatattc
     3421 ttcaatcatg taatcaacaa attgttttag aatatcaaag gcttcgtaac tttccaaaat
     3481 tttaatatgt ttatcggcaa aattggacat ataccattcg tcagtgattg gattagtatt
     3541 taaatcatct aaaaaaacat ttacatcatc taaaaacatg actaatcctt aaacttaaaa
     3601 tctgtttttt caccggttct tgtgttttca ataaacttaa aatctgtttt ttcaccggtt
     3661 cttgtgtttt caatgtaatg tatttcaatt ttgtttacgt tttgaacacg cttaacccaa
     3721 ccgtcttttg ctaaccaacc atttttagta tcggacatag gaggtattct cgcaggagtt
     3781 ttgccctgtg ggtttgcctt aacttcttcc attgctaatt gttcctttaa attattaggt
     3841 attgtacgac cggttgattt ttcaacagat tgtgtcccta tttttaatga tttgtttccc
     3901 ccagccattt ccccgtctat agtctgcata tggcgaacag caggtttttt atagccggta
     3961 tttttaaccc aatcccactt ggtcgggtta aggtttactt ttttaccgcc tcaaaccgta
     4021 gttgcggcct ctgctatgg
//
LOCUS       DAWGKF010000172         4005 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.172, whole genome shotgun sequence.
ACCESSION   DAWGKF010000172 DAWGKF010000000
VERSION     DAWGKF010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4005)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4005)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4005
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.172"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            14..211
                     /locus_tag="WHR07_001846"
     CDS             14..211
                     /locus_tag="WHR07_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEZ2131018.1"
                     /translation="MEAFTREGDFFEGKGVDVLYMHFHKANEFLGMTRLPTFLCNDVV
                     KNPQVEKYLADYQAHLEKVFG"
     gene            complement(583..1623)
                     /gene="queA"
                     /locus_tag="WHR07_001847"
     CDS             complement(583..1623)
                     /gene="queA"
                     /locus_tag="WHR07_001847"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEZ2131019.1"
                     /translation="MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMPMQDRVFGD
                     LPDYVEAGDVLVFNNTKVMKARLFGQKDSGGRIEALIERVLDSHTALAHIRSSKSPKP
                     GMGLVFEGGIRAVMVGREGELFCLRFEGGQTVYELLEQNGHLPLPPYIERAADADDDS
                     RYQTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIE
                     EHKMHSEWFEVPSETVAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTD
                     IFITPGYRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGD
                     AMILGRNEGVVR"
     gene            1740..1997
                     /locus_tag="WHR07_001848"
     CDS             1740..1997
                     /locus_tag="WHR07_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase"
                     /protein_id="HEZ2131020.1"
                     /translation="MRKIKLPAHFPQKPPFFDILLDIYRQLRENKHILTVVFHHRKTV
                     SEHHSARFAPLPQAGCFLKNQRNNPPKHRQPLKEQKWICAN"
     gene            1979..2434
                     /locus_tag="WHR07_001849"
     CDS             1979..2434
                     /locus_tag="WHR07_001849"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEZ2131021.1"
                     /translation="MDLRKLKKLIDLVEESGIAEIEVTEGEEKVRITRTIAAAPVYAA
                     PVPAAAPAVTPAAAPVAASAPAAAPAARDLSDAQKSPMVGTFYRAPGPNAAPFVEVGQ
                     QVKVGDTLCIIEAMKLMNEIEAEKSGTVKEILVENGTPVEFGEPLFIIG"
     gene            2546..3907
                     /gene="accC"
                     /locus_tag="WHR07_001850"
     CDS             2546..3907
                     /gene="accC"
                     /locus_tag="WHR07_001850"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEZ2131022.1"
                     /translation="MLKKVLIANRGEIALRVLRACREMGIATVAVHSEADKDSLHVKL
                     ADESVCIGPAASAQSYLNVPAIIAAAEVSCADAVHPGYGFLAENADFAEQVEQSGFTF
                     IGPKPDTIRLMGDKVSAKHAMIEAGVPCVPGSDGALPDDGEEILKIADKVGYPVIIKA
                     SGGGGGRGMRVVEKKEDLLQSVEMTKAEAGAAFGNPMVYMERYLQRPRHVEIQVIADE
                     HGNAVYLAERDCSLQRRHQKVIEEAPAPFITEKERAKIGNACADACKRIGYRGAGTFE
                     FLYEDGEFFFIEMNTRVQVEHPVTELITGVDIVQEQLRIASGLPLQYKQKDIKIEGHA
                     FECRINAEDPYNFIPSPGPIESCHLPGGFGIRVDSHIYQGYRIPPYYDSLIGKICVHG
                     KTREQAMAKMRVALAELAVTGIKTNTPLHRDLFNDPGFQKGGVSIHYLEHWLEDRKAK
                     QDK"
BASE COUNT          994 a         1187 c          966 g          858 t
ORIGIN      
        1 ttggaatgcg ccgattgagg cgtttacccg cgaaggcgat ttctttgaag gcaaaggcgt
       61 tgatgttttg tatatgcact tccacaaagc caacgagttt ttgggtatga cccgcctgcc
      121 gacattctta tgtaacgatg tggttaaaaa tccgcaagtg gaaaaatact tggcagatta
      181 tcaggcacac ttggaaaaag tgttcggcta aaaatttatc ttataaacaa acaaaggcag
      241 cctgaaagat tgaatggtct gcacccctaa ggttggacta accaaccgac taaggtgcag
      301 attatttttt gttgcttttt cagcttttcg ttgggttaga tattcttgcc cactgttttc
      361 aggcagcctt gaatacaaaa aaatggcgta tgtaatatgt ttatacgacc aaaacggaat
      421 gaattttaac gtattgcgcg tcatcaacaa tgactgagtt tctcgcctct cgcgcctgaa
      481 tctatgtcat atacagttcc tttcattcaa atcaacaaaa gaatgccgtc cgaacgtccg
      541 ttcagacggc acttgtcttc ccacaataga cttgaggctg ttctaacgta ccaccccttc
      601 gttccgcccc aaaatcatcg catcgccgta gctgaagaaa cggtattcac gttcgaccgc
      661 ataacgatac gcggcgcgga tatgacccat acccgaaaac gcgctgacaa gcatcagcag
      721 cgtcgatttc ggcagatgga aattggtaac cagcctgtcg gcaacattaa aacggtagcc
      781 cggcgtgatg aaaatatcgg tgtcgccctg ccccgctttc agacgacccg tcgcacgcgc
      841 ggcagactcg agggcgcgca tagaagtcgt gccgaccgcc cagactttgt tcccccgggc
      901 ttttgccgcc tcaacggcgg cgacggtttc agacggcact tcaaaccatt cgctgtgcat
      961 tttgtgttct tcgatttttt ccacacgcac gggttggaat gtccccgcac cgacgtgcag
     1021 ggttacttct gcggttactg cgcctttgtc tttcaggcgg cgcaaaagtt cttccgtaaa
     1081 atgcagaccc gccgtcggcg cggcgaccgc accctgatat ttggcataaa cggtttgata
     1141 acggctgtcg tcatccgcat cggcggcacg ttcgatataa ggcggcagag gcaaatggcc
     1201 gttctgttcc aaaagttcgt aaacggtttg accgccttca aaacgcaggc agaacagttc
     1261 gccctcacgc ccgaccatca cggcacggat gccgccttca aacaccagcc ccataccggg
     1321 cttgggcgat ttggacgaac ggatgtgcgc cagtgcggta tgactgtcta aaacacgctc
     1381 gatcagggct tcgatcctgc cgccgctgtc tttttgacca aacagccgcg ccttcattac
     1441 cttggtgttg ttgaacacca aaacgtcgcc tgcctcgaca taatcgggca aatcgccgaa
     1501 tacccggtct tgcatgggca tatccggcag cgcaaccaaa aggcggctgc tgccgcgcac
     1561 ttcgggcgga tgctgggcaa tcagcttttc gggcagggta aaatcaaaat ctgaaatatc
     1621 catttttaca ctctcgttcg ggcaagccgc cattatacgc actttagccc tttttcagac
     1681 ggcatctttg tccgaaaaac caacagatta gaataaacac tcttaacctg gaacatcttg
     1741 tgcgcaaaat caaacttcct gcacatttcc cccaaaaacc gccgtttttt gatattttac
     1801 tggacattta ccgacaactt cgggaaaata aacacattct cacggtcgtt ttccaccaca
     1861 ggaaaaccgt atccgaacac cattccgccc ggtttgcgcc gttgccgcaa gccggctgtt
     1921 ttctgaaaaa ccaacgcaac aacccgccga aacaccggca gcctttaaag gaacagaaat
     1981 ggatttgcgc aaattaaaaa aactgattga tttggttgaa gaatcgggta tcgccgaaat
     2041 cgaagtaacc gaaggcgagg aaaaagtccg catcacccga accatcgccg ccgcacccgt
     2101 ttacgccgcg cccgtacctg ccgccgcgcc ggccgtaacg cctgccgccg cacccgttgc
     2161 ggcatccgcg cctgccgccg cacctgccgc ccgcgatttg tccgacgcgc aaaaatcacc
     2221 tatggtcggc acgttctacc gcgcacccgg cccgaatgcc gcgccttttg tcgaagtcgg
     2281 ccaacaggtt aaagtcggcg acacgctgtg catcatcgaa gcgatgaagc tgatgaacga
     2341 aatcgaagcc gaaaaatccg gcacggtcaa agaaattttg gtcgaaaacg gtacgcccgt
     2401 cgaattcggc gaaccgctct tcatcatcgg ataatcctgt tttcagacgg cataaacttc
     2461 cgatgccgtc tgaaatgctt tcccccttca gcgttcccgc accctttttt acggacgggt
     2521 tgccggaacc gcaggaaagg tcatcatgct gaaaaaagtt ttaatcgcca accgaggcga
     2581 aatcgcatta cgcgtactcc gtgcctgccg cgaaatgggc attgccaccg tcgccgtgca
     2641 ttccgaggcc gacaaagaca gcctgcacgt caaactcgcc gacgaatccg tgtgcatcgg
     2701 ccctgccgct tccgcgcaaa gctacctcaa cgtccccgcc attatcgccg ccgccgaagt
     2761 aagctgcgcg gacgctgtcc acccgggcta cggtttcctt gccgaaaacg ccgatttcgc
     2821 cgaacaggtc gagcagtccg gctttacctt tatcggcccg aaacccgaca ccatccgcct
     2881 gatgggcgac aaagtatccg ccaaacacgc catgatcgaa gcgggcgtgc cttgtgttcc
     2941 cggctctgac ggcgcattgc ccgacgacgg cgaagaaatc ctcaaaatcg ccgataaagt
     3001 cggttatcct gtcattatca aagcctctgg cggcggcggc ggtcgcggta tgcgcgtggt
     3061 cgagaaaaaa gaagacctcc tccaatctgt cgaaatgacc aaggcagaag caggcgcggc
     3121 attcggcaac ccgatggttt acatggaacg ctatttgcaa cgtccgcgcc acgtcgaaat
     3181 ccaagtgatt gccgacgaac acggcaacgc cgtctacctt gccgaacgcg actgttcgct
     3241 acaacgccgc caccaaaaag tcatcgagga agcaccggct ccgttcatca ctgaaaaaga
     3301 acgcgccaaa atcggcaacg cctgtgccga cgcctgcaaa cgcatcggct atcgtggcgc
     3361 aggtacgttt gaattcctgt acgaagacgg cgaatttttc tttatcgaga tgaatacgcg
     3421 cgttcaggtt gagcatccgg ttaccgagct catcaccggc gtggacattg tgcaggagca
     3481 actccgcatc gcatccggcc tgccgctgca atacaagcag aaagacatca aaatcgaagg
     3541 ccacgcgttt gagtgccgta tcaacgccga agacccatac aacttcatcc ccagcccggg
     3601 cccgattgaa agctgccacc tgcccggcgg cttcggtatc cgcgtcgaca gccacattta
     3661 ccaaggctac cgcatcccgc cttactacga cagcctgatc ggcaaaatct gcgtacacgg
     3721 caaaacgcgt gaacaggcaa tggcgaaaat gcgcgtcgca ctcgccgagc tggcggtaac
     3781 cggcatcaaa accaatacgc cgcttcaccg cgacttgttc aacgacccag gtttccaaaa
     3841 aggcggcgtc agcatccact atttggaaca ctggctggaa gatcgcaaag ccaaacagga
     3901 caaataagcc gccgccgata tgccgtctga aacagtttgt ccgttttcag acggcatttc
     3961 ccttgccccg cgccgtctga aaccgatttc gatatagtgg attaa
//
LOCUS       DAWGKF010000173         3972 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.173, whole genome shotgun sequence.
ACCESSION   DAWGKF010000173 DAWGKF010000000
VERSION     DAWGKF010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3972)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3972)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3972
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.173"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            95..901
                     /locus_tag="WHR07_001851"
     CDS             95..901
                     /locus_tag="WHR07_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4198 domain-containing protein"
                     /protein_id="HEZ2131023.1"
                     /translation="MKKTLTLLAVSALFATSAHAHRVWVETAHTHGGEYLKADLGYGE
                     FPELEPIAKDRLHIFSKPMQLVTEKGKENMIQRGTYNYQYRSNRPVKDGSYLVIAEYQ
                     PTFWSKNKAGWKQAGIKEMPDASYCEQTRMFGKNIVNVGHESADTAIITKPVGQNLEI
                     VPLDNPANIHVGERFKVRVLFRGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDST
                     DDKGEVDIIPLRQGFWKANVEHKADFPDQSVCQKQANYSTLTFQIGHSHH"
     gene            complement(959..1684)
                     /locus_tag="WHR07_001852"
                     /pseudo
     CDS             complement(959..1684)
                     /locus_tag="WHR07_001852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581011.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate dehydrogenase"
     gene            1767..2477
                     /locus_tag="WHR07_001853"
     CDS             1767..2477
                     /locus_tag="WHR07_001853"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HEZ2131024.1"
                     /translation="MNAAIEHVQAVAFDLDGTLCDSVPDLAAAAEAMLEQLGMKPLPA
                     KVVESYVGDGIGKLVHRVLTNDRDREADSELWEKGFVSYMKYYRDHLSVFTRPYPKTE
                     AGLALLKSLGIPLAVVTNKNEILAVELLKQLGLADYFSLILGGDSLPEKKPSPLPLRH
                     AAEVLGIDVANMVMVGDSRNDIIAAKAAGCLSVGVTFGYGDMTLLSQDDATRPDWIIG
                     SLPEIYENLQPQKNKDEE"
     gene            2550..3011
                     /gene="recX"
                     /locus_tag="WHR07_001854"
     CDS             2550..3011
                     /gene="recX"
                     /locus_tag="WHR07_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HEZ2131025.1"
                     /translation="MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLN
                     EFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQQGIDEETSRNLLPDRSSEKQAA
                     IDVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC"
     gene            3085..3246
                     /locus_tag="WHR07_001855"
     CDS             3085..3246
                     /locus_tag="WHR07_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131026.1"
                     /translation="MSEQPEKNHNPLLEDERKNPVYRMGQAVAGFMLVVWVAVLALVF
                     FLVFRFWLS"
     gene            3399..3881
                     /locus_tag="WHR07_001856"
     CDS             3399..3881
                     /locus_tag="WHR07_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEZ2131027.1"
                     /translation="MTQQRQLPSHELIMSELMMPDTANFSGNVHGGELLLLLDQVAYS
                     CASRYSGNYCVTLSVDKVLFKEPIHIGDLVTFYAAVNYTGRTSMEIGIRVEAQNIRTG
                     EIRHTNSCYFTMVAVKDGKPVPVPPLEILTDRQRCRYEKAKKRRDISLQASEDMSCGC
                     "
BASE COUNT         1059 a         1204 c          891 g          818 t
ORIGIN      
        1 agacagtttt cagacagcaa atccgtcttc acacgatacc tattttgtta taacataaca
       61 aaatctttga cccacacgag acaaaggctg caccatgaag aaaacattga cactgctcgc
      121 cgtttccgcc ctatttgcca catccgccca cgcccaccgc gtctgggtcg aaaccgccca
      181 cacgcacggc ggcgaatacc ttaaagccga cttgggctac ggcgaatttc ccgaactcga
      241 acccatcgcc aaagaccgcc tgcacatctt cagcaaaccg atgcagctgg ttaccgaaaa
      301 aggcaaggaa aacatgattc aacgcggcac atacaactac cagtaccgaa gcaaccgtcc
      361 cgttaaggac ggcagttacc tcgtcatcgc cgaatatcag cctactttct ggtcaaaaaa
      421 caaagcaggc tggaaacagg cgggcatcaa agaaatgcct gacgcaagct attgcgaaca
      481 aacccgaatg ttcggcaaaa acatcgtcaa cgtcggacac gaaagcgcgg acaccgccat
      541 catcaccaaa ccggtcggac aaaacttgga aatcgtcccg ctggacaatc ccgccaacat
      601 tcacgtaggc gaacgcttca aagtccgcgt tctgttccgt ggcgaaccgc tgcccaatgc
      661 caccgttacc gccacctttg acggcttcga caccagcgac cgcagcaaaa cgcacaaaac
      721 cgaagcacag gctttctccg acagcacaga cgacaaaggc gaagtggaca tcatcccctt
      781 gcgccaaggc ttctggaaag ccaatgtcga acacaaagcc gacttccccg atcaaagcgt
      841 gtgccaaaaa caggcgaact actcgacttt aaccttccaa atcggccatt cgcaccatta
      901 atcccgcccg cacaaaaatg ccgtctgaag gcttcagacg gcattttttg ttcaaacatc
      961 aataccaacc gcgcagtttc atcgcttttt caacacggcg gatactcatc atgtaagacg
     1021 cggttcgcaa atcgacatca tactcttgcg ccaagttcca tatatcgcgg aacgcacggc
     1081 gcaggacgac ggtttctttt tcctgaactt cgtcaaactc ccaataatag ccttgcagat
     1141 tttgtaccca ttcaaaataa gataccacca cgccgccgca gttcgccaaa atatcgggca
     1201 cgaccaatac gccgttttga cgcaggataa cgtcggcttc gggcgtagtc gggccgttcg
     1261 cgccttcgac cacgattgtc gcgcggactt taccggcatt ttcagaagtc agttggtttt
     1321 ccagtgcgca aggggcaagt acgtccactt ccagagccaa aagttcggcg ttggtaattt
     1381 ccttgccgta gccggcttca ttggtgatga aacctttggt ttggaattct ttgatgattg
     1441 cttccatatc caagccgttt tcgttgtaaa tggcaacgtc aacagtagaa accgcaacaa
     1501 ctttcgcgcc ggattgatgc gcgtaataac ctgtgtggta accgacatta ccgaagcctt
     1561 ggatggcgta agtggcaccc ttcacgtctt tgcccagttt ttccaaggct tggacggcgg
     1621 cgaggttcac gccgtaaccg gtagcctcgg tacgcgccaa agagccgccg aactcaaccg
     1681 gttgcgattg ttaacaatct atacattaga agccctgtgc aaacgatgtt aaaataaacc
     1741 ctttcaaccc gacaggaaat cagattatga atgcagccat cgaacacgtc caagccgtcg
     1801 ccttcgattt ggacggcaca ctgtgcgatt ccgtccccga ccttgccgcc gccgcagaag
     1861 cgatgttgga gcaactcggt atgaaaccgc tgcctgcaaa agtggtcgaa agctatgtgg
     1921 gcgacggcat cggcaaactg gttcaccgcg tcctcaccaa cgaccgcgac cgcgaagccg
     1981 attccgaact gtgggaaaaa ggtttcgtat cctatatgaa atactaccgc gaccatttga
     2041 gcgtcttcac ccgcccctat cccaaaaccg aagccgggct ggcattgctc aaatctttag
     2101 gcatcccgct cgccgtcgtt accaacaaaa acgaaatcct tgccgtcgaa ctgttgaaac
     2161 agctcggact tgccgactac ttcagcctga tactcggcgg cgacagcctg cccgagaaaa
     2221 aacccagccc cctgccgctg cggcatgccg ccgaagtttt gggtatcgat gttgcaaaca
     2281 tggttatggt cggcgactcg cgcaacgaca tcatcgccgc caaagccgcc ggctgcctga
     2341 gcgtcggcgt taccttcggt tacggcgata tgacgctgct ctcgcaagac gatgcgaccc
     2401 gccccgactg gattatcggc tcgctgcccg aaatttacga aaacctgcaa ccgcagaaaa
     2461 ataaagacga agaataaaac aatctgttca gacggcatcg gaatccgttt cccatgccgt
     2521 ctgaatcttt ccgtgccgaa accgccgcca tgaaaccgca aaaatcccta cgcgcccgcg
     2581 cgatggacat cctctcgcgc caagaagtca gccgcatcgg tctgaaacgc aaacttgcac
     2641 cgcacgccga aagcgaagaa gagttggaaa acgtgttaaa cgaatttgcc gaacgcaact
     2701 ggcagtcgga tttgcgctat gccgaagcct atatccgcag caaaagccgc aaacacggtt
     2761 cattgaggct gaaacaggct ttggcgcaac agggcataga tgaagaaacc agccgcaacc
     2821 tgcttcccga ccgctcaagc gaaaaacagg ccgccataga cgtgttgcgt aaaaaattca
     2881 aacaccccgc cgccgacctt aaagaaaaac aaaaacaggc gcgtttcctc gcctatcgcg
     2941 gattcgatgc cgataccgtt cagacggcat tgaaacacgc ttgggacgaa aattgggaag
     3001 acggctgctg accttccttc ttgaatcttt ttgcacggca acataacctt acgcccgttt
     3061 ccaacttttc cgattgagaa caaaatgtcc gaacaacccg aaaaaaatca taaccccctc
     3121 cttgaggacg aacgcaagaa ccccgtgtac cgcatggggc aggcagttgc cggattcatg
     3181 ctcgtcgttt gggtcgccgt attggcactc gtgtttttcc tggtcttccg tttttggctt
     3241 tcctaaacaa aatgccgtct gaaggcttca gacggcatcg gcggtccatt tcggcagact
     3301 atcccatcat agcttttttt agcttgaatt ccacttcccc attccctaaa atttccccgc
     3361 acccatttca aaacaccctt tcttaaaaca ggtacaccat gacacaacaa cgccaactgc
     3421 cttcccacga actcattatg tccgaactga tgatgccgga caccgccaat ttcagcggca
     3481 acgtacacgg cggcgaactc ctgctcctgc tcgaccaagt cgcctattcc tgcgccagcc
     3541 gttacagcgg caattattgc gttaccctgt cggttgacaa agtcctgttt aaagaaccca
     3601 tccacatcgg cgatttggtt accttttacg ccgctgtcaa ctacacggga cgcacctcga
     3661 tggaaatcgg catccgtgtc gaagcacaaa acatccgcac cggcgaaatc cgccacacca
     3721 acagctgcta cttcacgatg gttgcggtca aagacggcaa acccgtccct gtccctccgc
     3781 tggaaatcct gaccgaccgc caacgctgcc gctacgaaaa agccaaaaaa cgcagagaca
     3841 tcagcctgca agcctctgaa gacatgtcct gcggctgctg acggcggact atgccgtctg
     3901 aaagacaggc acatcgcgcc atccgtttcc attgcaaacg gatgaaatca agcaaatata
     3961 gtggattaaa tt
//
LOCUS       DAWGKF010000174         3925 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.174, whole genome shotgun sequence.
ACCESSION   DAWGKF010000174 DAWGKF010000000
VERSION     DAWGKF010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3925)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3925)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3925
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.174"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..331)
                     /locus_tag="WHR07_001857"
     CDS             complement(<1..331)
                     /locus_tag="WHR07_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEZ2131028.1"
                     /translation="MFSLYREDSLISRLNRDGYLTSPSADFLELLSLCRDIHALTDGA
                     FDPTVQALWKLYADYFAARPDAETPPPQNSVKEALKRVGFGKVSFDDREIRFAEKGMG
                     LSLNGIAQ"
     gene            complement(312..593)
                     /locus_tag="WHR07_001858"
     CDS             complement(312..593)
                     /locus_tag="WHR07_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nosX protein required for nitrous oxide
                     reduction"
                     /protein_id="HEZ2131029.1"
                     /translation="MGRHFGRRRFLTVAAVAAAGAAVSFLPNPFAADDEKRNKDEKRN
                     ENVFFWKGVALGSGAELRLFGVDDRQAADLVNKVLAEVARLEKIVQPLP"
     gene            complement(602..1396)
                     /locus_tag="WHR07_001859"
     CDS             complement(602..1396)
                     /locus_tag="WHR07_001859"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HEZ2131030.1"
                     /translation="MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPL
                     LTTKKLHLRSIIHELLWFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWP
                     APDGRHIDQIANVVEQIKKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLS
                     CQLYQRSADIFLGVPFNIASYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAAL
                     QLEREPRALPVMKINPEVKDLFSFKFEDFELEGYDPHPHIKAAVSV"
     gene            1780..3114
                     /gene="gdhA"
                     /locus_tag="WHR07_001860"
     CDS             1780..3114
                     /gene="gdhA"
                     /locus_tag="WHR07_001860"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HEZ2131031.1"
                     /translation="MTDLNTLFANLKQRNPNQEPFHQAVEEVFMSLDPFLAKNPKYTQ
                     QSLLERIVEPERVVMFRVTWQDDKGQVQVNRGYRVQMSSAIGPYKGGLRFHPTVDLGV
                     LKFLAFEQVFKNALTTLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMTELYRHIGADTD
                     VPAGDIGVGGREIGYLFGQYKKIRNEFSSVLTGKGLEWGGSLIRPEATGYGCVYFAQA
                     MLQTRNDSFEGKRVLISGSGNVAQYAAEKAIQLGAKVLTVSDSNGFVLFPDSGMTEAQ
                     LAALIELKEVRRERVATYAKEQGLQYFENQKPWGVAAEIALPCATQNELDEEAAKTLL
                     ANGCYVVAEGANMPSTLGAVEQFIKAGILYAPGKASNAGGVATSGLEMSQNAIRLSWT
                     REEVDQRLFGIMQSIHESCLKYGKVGDTVNYVNGANIAGFVKVADAMLAQGF"
     gene            3256..3630
                     /locus_tag="WHR07_001861"
     CDS             3256..3630
                     /locus_tag="WHR07_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131032.1"
                     /translation="MIMDQYYMELKNKLSNRPILLDNTNDFLFVLVNTVKAMIENTDK
                     SQLSELDKILDGVTSQELKLAYDFCQGKFGQAGFSYRRHPNYFYLSSLIATFPEFELS
                     KADRDYLKGIINFDNYLLYELD"
     gene            3674..>3925
                     /locus_tag="WHR07_001862"
     CDS             3674..>3925
                     /locus_tag="WHR07_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone acetyltransferase"
                     /protein_id="HEZ2131033.1"
                     /translation="MIELKLVDESSFQAVLDLKISEADERARFVAPNVRSLADAWLYR
                     ENEDVFPRAIYWDKQVVGFLLLEIDKDEAEYFIWRIMIGQ"
BASE COUNT         1068 a         1014 c          924 g          919 t
ORIGIN      
        1 cttgcgcgat gccgttcaag gacaaaccca tacccttttc ggcaaaacgg atttcacggt
       61 cgtcaaacga gactttgccg aagccgaccc gtttcagggc ttccttcacg ctgttttgag
      121 gaggcggcgt ttccgcatcg ggacgggcgg caaaataatc ggcatacagt ttccacaacg
      181 cctgcactgt cggatcgaac gcgccgtccg tcagcgcgtg aatatcgcgg cacaggctca
      241 acagttccaa aaaatccgcc gacggcgaag tcagataacc gtccctgttc aggcggctga
      301 tcaggctgtc ttcacggtaa aggctgaaca attttttcca aacgcgccac ttccgccaaa
      361 accttgttga ccaaatccgc cgcctgtctg tcgtccacac cgaacaggcg cagctccgca
      421 ccggaaccca gcgcgacacc tttccagaag aacacatttt cattgcgttt ttcatcttta
      481 ttgcgttttt catcatcggc ggcaaaagga ttcggcagga aagaaaccgc cgcgcccgcc
      541 gccgcaacgg cggcaactgt caaaaaacgc ctgcgcccga aatgcctgcc cataccgcct
      601 cctaaaccga cactgccgcc ttgatgtgcg gatgggggtc gtaaccttcc aactcgaaat
      661 cttcaaactt gaaggaaaac aaatctttga cttcaggatt gattttcatc actggcaagg
      721 cgcgcggttc gcgttccaac tgcaatgcgg cctgctcgaa atggttgcgg tacaaatgcg
      781 cgtcgccaaa cgtatggaca aactcgcccg cctccaatcc gcacacttgc gccatcatca
      841 tggtcaacaa tgcgtagctg gcaatattaa acggcacacc aaggaaaata tctgcactac
      901 gctggtaaag ctggcaggac agtttgccgt cggcaacgta aaactgaaac agcgcgtggc
      961 agggcggcaa ggccatttcg tcgaccaaag ccggattcca cgccgataca atcaggcggc
     1021 gcgagtcggg gtttttctta atttgttcca ccacattggc gatttggtcg atatgcctgc
     1081 cgtcgggcgc gggccagtta cgccactggt agccgtaaac cgggcccaag tcgccgtttt
     1141 cgtccgccca ctcgtcccaa atggaaacat tgttgtcctt taggtatttg atattggtat
     1201 cgcctttgag aaaccaaagc agctcgtgga taatcgaacg cagatgcagc tttttggtcg
     1261 tcagcagcgg aaaacctttg cccaagtcaa aacgcatctg ataaccgaat acggagcgcg
     1321 tgcccgtacc ggtgcggtct gatttgtccg taccgttgtc gaggacgtgg cgcatcaagt
     1381 ccaaataggc tttcatagca gtctttcatc aaattaaacg gcgcatattg taacatttcc
     1441 ggataatgcc caaaacacgg atacagacag gcaggattgt tggcaatttc agtccttttc
     1501 cacagtaaaa cccggtggga aaacaaaatt accttgattg gaatcaaaaa atctagttta
     1561 attacttaga ataaaatttc aataatattt ttatttacga aattaattta tgattattga
     1621 ttaattatcg gcaacaaaca tcaaacatcg aaaacatgga aaaaataatg tcaacaattt
     1681 ttgccaaatc gggcttggca tcagaaaaaa ataggtttat attcccacct acaaatttgt
     1741 tttcccatta gtacactatc aaccaaaagg agtatccgaa tgactgacct gaacaccctg
     1801 tttgccaacc tcaaacaacg caatcccaat caggagccgt tccatcaggc ggttgaagaa
     1861 gtcttcatga gtctcgatcc gtttttggca aaaaatccga aatacaccca gcaaagcctg
     1921 ctggaacgca tcgtcgaacc cgaacgcgtc gtcatgttcc gcgtaacctg gcaggacgat
     1981 aaagggcaag tccaagtcaa ccggggctac cgcgtgcaaa tgagttccgc catcggtcct
     2041 tacaaaggcg gcctgcgctt ccatccgacc gtcgatttgg gcgtattgaa attcctcgct
     2101 tttgaacaag tgttcaaaaa cgccttgacc accctgccta tgggcggcgg caaaggcggt
     2161 tccgacttcg accccaaagg caaatccgat gccgaagtaa tgcgcttctg ccaagccttt
     2221 atgaccgaac tctaccgcca catcggcgcg gacaccgacg ttccggccgg cgacatcggc
     2281 gtaggcggac gcgaaatcgg ctatctgttc ggacaataca aaaaaatccg caacgagttt
     2341 tcttccgtcc tgaccggcaa aggtttggaa tggggcggca gcctcatccg tcccgaagcg
     2401 accggctacg gctgcgtcta tttcgcccaa gcgatgctgc aaacccgcaa cgatagtttt
     2461 gaaggcaaac gcgtcctgat ttccggttcc ggcaacgtgg cgcaatacgc cgccgaaaaa
     2521 gccatccaac tgggcgcgaa agtgctgacc gtttccgact ccaacggctt cgtcctcttc
     2581 cccgacagcg gtatgaccga agcgcaactc gccgccttga tcgaattgaa agaagtccgc
     2641 cgcgaacgcg ttgccaccta cgccaaagag caaggtctgc aatactttga aaaccaaaaa
     2701 ccgtggggcg tcgccgccga aatcgccctg ccctgcgcga cccagaacga attggacgaa
     2761 gaagccgcca aaaccctgtt ggcaaacggc tgctacgtcg ttgccgaagg tgcgaatatg
     2821 ccgtcgactt tgggcgcggt cgagcaattt atcaaagccg gcatcctcta cgccccggga
     2881 aaagcctcca atgccggcgg cgtagcaact tcaggtttgg aaatgagcca aaacgccatc
     2941 cgcctgtctt ggactcgtga agaagtcgac caacgcctgt tcggcatcat gcaaagcatc
     3001 cacgaatcct gtctgaaata cggcaaagtc ggcgacacag taaactacgt caatggtgcg
     3061 aacattgccg gtttcgtcaa agttgccgat gcgatgctgg cgcaaggctt ctaagcaaac
     3121 gccgccgctc cgcaaacaaa atgccgtccg aaccgcaaat gctgttcaga cggcatttca
     3181 ttatccgccc gttcgaatcg ggtgatacta tttgtatcca gaattgttgg atagtttggg
     3241 agtggagagg aagaaatgat tatggaccaa tactatatgg agttaaagaa taagttatct
     3301 aacagaccaa tcctactgga taatactaat gattttcttt ttgttttagt aaatacagtg
     3361 aaagctatga tagaaaatac tgataaaagt cagctttcag agttagataa aattttagac
     3421 ggtgtcacaa gtcaagaatt gaaacttgcc tatgattttt gtcaagggaa attcggtcaa
     3481 gcaggttttt cttatcgtag gcacccgaat tatttttatt tgtccagttt aattgcgact
     3541 tttccagaat ttgagttgtc taaagcagac cgagattacc tcaaaggaat cataaatttt
     3601 gataactacc ttttatatga gttagattag tctttaatca cctcaaaacc ctatttattc
     3661 aaaaggagaa aaaatgattg agctgaaatt agtagatgag agcagttttc aggcagtgct
     3721 ggatttgaaa atatctgaag ctgatgaacg agcacgtttt gtggctccaa atgtacgctc
     3781 tttagctgac gcatggctct accgggaaaa tgaagatgtg tttccgaggg caatctattg
     3841 ggataagcaa gtggttggct ttctcctgct ggaaatagac aaggatgaag cagaatactt
     3901 tatctggcgg ataatgattg gtcag
//
LOCUS       DAWGKF010000175         3921 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.175, whole genome shotgun sequence.
ACCESSION   DAWGKF010000175 DAWGKF010000000
VERSION     DAWGKF010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3921)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3921)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3921
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.175"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            155..1672
                     /locus_tag="WHR07_001863"
     CDS             155..1672
                     /locus_tag="WHR07_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ2131034.1"
                     /translation="MLYFRYGFLVVWCAAGVSAAYGADAPAILDDKALLQVQRSVSDK
                     WAESDWKVENDAPRVVDGDFLLAHPKMLEHSLRDALNGNQADLIASLADLYAKLPDYD
                     AVLYGRARALLAKLAGRPAEAVARYRELHGENAADERILLDLAAAEFDDFRLKLAERH
                     FAEAAKLDLPAPVLENVGRFRKKTEGLTGWRFSGGISPAVNRNANNAAPQYCRQNGGR
                     QICSVSRAERAAGLNYEIEAEKLTALADNHYLLFRSNIGGTSYYFSKKSAYDDGFGRA
                     YLGWQYKNARQTAGILPFYQVQLSGSDGFDAKTKRVNNRRLPPYMLAHGVGVQLSHTY
                     RPNPGWQFSVALEHYRQRYREQDRAEYNNGRQDGFYVSSAKRLGESATVFGGWQFVRF
                     VPKRETVGGAVNNAAYRRNGVYAGWAQEWRQLGGLNSRVSASYARRNYKGVAAFSTEA
                     QRNREWNVSLALSHDKLSYKGIVPALNYRFGRTESNVPYAKRRNSEVFVSADWRF"
     gene            complement(1731..3512)
                     /locus_tag="WHR07_001864"
     CDS             complement(1731..3512)
                     /locus_tag="WHR07_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional anthranilate synthase component I
                     family protein/aminotransferase class IV"
                     /protein_id="HEZ2131035.1"
                     /translation="MPYFALFDDAVSGRAKRYQNHVESRFFRPEELDALDGALQSGWQ
                     KGLHAVLFADYGFGLPLTGVESERGGNLALHWFADCADTDAASWLARHSDGLPAGIST
                     PQSSVSEADYLDHIRQIHEAIRRGDTYQINYTTRLHLQAYGNPVKLYQRLRQPVPYAV
                     LSHLPDAQGQSAWTLCFSPELFLKIGSDGTISTEPMKGTAPILGDGQDERRAAELQAD
                     PKNRAENVMIVDLLRNDLGKIAQTGTVCVPEPFKVSRFGSVWQMTSTIQAQALPHTSF
                     ADILRAAFPCGSITGAPKKMSMQIIESLEAEARGLYTGSIGYLNPCSGGLGFEGTFNV
                     VIRTLSLTPLSDGIYQGVYGVGSGIVIDSDPAAEYRECGWKARFLNELRPDFGIFETL
                     RVENGRCALLDRHLCRLKTSAQALNLPLPDGCENQIKQYIARLPDGAFRIKALLASDG
                     ISLSRAVLNRLTDKQRVIISPTILPAQNYLRRFKTTCRTVFDQAWQTAETQGAFDSLF
                     FNSDGILLEGGRSNVFVKYQGQWLTPSLDLDILNGIMRQAVLDEPQKYLQTNQVIETH
                     ITQKTLQEAEEIRLSNALRGVFAAALA"
BASE COUNT          825 a          874 c         1282 g          940 t
ORIGIN      
        1 tataaatgtg aaatccgccc tttgaaaatc gggcggcggt tttttgcctg cccgctttca
       61 ggcggcaaag ccggttttta cgggcttttg cctgtttttc ggatggtttg acgtgcttcg
      121 gcggcgtgtt tgccggaaag gtaaatgaca gggtatgttg tatttcagat acggcttttt
      181 ggttgtttgg tgtgcggcag gtgtttctgc cgcctatggg gcggatgcgc ccgcgatttt
      241 ggatgacaag gcattgttgc aggtgcagcg gtcggtgtcg gataagtggg cggaatcaga
      301 ttggaaagtt gaaaatgatg ccccgcgcgt ggttgacggg gattttttgt tggcacatcc
      361 gaaaatgttg gaacatagtt tgcgcgacgc gctcaacggc aatcaggcgg atttaatcgc
      421 ttcgttggcg gatttgtatg ccaagctgcc ggattatgac gcggttttgt acggcagggc
      481 gcgggctttg ctggcgaaat tggcgggaag gccggcggag gcggtggcgc ggtatcggga
      541 actgcacggg gaaaatgcgg cagacgagcg gattttgctg gatttggcgg cggcggagtt
      601 tgacgatttc cgactgaagt tggcagaaag gcattttgcg gaggcggcaa aattggattt
      661 gccggcaccg gttttggaaa atgtggggcg ttttcggaaa aaaacggagg ggctgacggg
      721 ctggcgtttt tcgggcggca tcagtccggc ggtcaataga aatgccaata atgccgcgcc
      781 gcagtattgc cggcaaaacg gaggccggca gatatgcagt gtcagccggg cggagcgggc
      841 ggcagggttg aattatgaaa tcgaggcgga aaaactgacg gcgttggcag ataatcatta
      901 tttgttgttc cgttccaata tcggcggcac gagctattat ttcagtaaaa aatcagctta
      961 tgacgacggg ttcggcaggg cgtatttggg ttggcagtat aaaaatgcac ggcagacggc
     1021 ggggattttg ccgttttatc aggtgcagtt gtcgggcagc gacggctttg atgcgaaaac
     1081 aaaacgggta aacaaccgcc gcctgccgcc gtatatgctg gcgcacggag tcggcgtgca
     1141 gctgtcccat acttaccgac caaacccggg atggcaattt tcggtcgcgc tggaacatta
     1201 ccgccaacgc taccgcgaac aggatagggc ggaatacaat aacggcaggc aggacgggtt
     1261 ttatgtttcg tcggcaaaac gtttgggcga atcggcaact gtgttcggcg gctggcagtt
     1321 tgtgcggttt gtgccgaaac gcgaaacggt gggcggcgcg gtcaataatg ccgcctaccg
     1381 gcgcaacggt gtttatgccg gctgggcgca ggagtggcgg cagttgggcg gtttgaatag
     1441 tcgggtttcc gcgtcttatg cccgccgcaa ctataagggc gttgcggctt tctcgacaga
     1501 ggcgcaacgc aaccgcgaat ggaatgtctc gctggctttg agccacgaca agttgtcgta
     1561 caaaggtatc gtgcccgcgt tgaattatcg tttcggcagg acggaaagta atgtgccgta
     1621 tgcgaaacgc cgcaacagcg aggtgtttgt gtcggcggat tggcggtttt gaatggtggg
     1681 ataatgccgt ccgaactttg gaaacaggtt cggacggcat ttttgcgcgt tcaggcaagg
     1741 gcggcggcaa atacgccgcg caaggcgttg gagaggcgga tttcttcggc ttcttgcagt
     1801 gttttttgtg tgatgtgtgt ttcgattact tgatttgttt gcaaatattt ttgcggttcg
     1861 tccaatacgg cttggcgcat tatgccgttt aaaatgtcta aatctaaaga gggcgtaagc
     1921 cattgtcctt ggtatttgac gaacacgttg cttctgccgc cttcgagcag gatgccgtct
     1981 gaattgaaaa acaggctgtc gaacgcgcct tgtgtttcgg cggtttgcca cgcttggtcg
     2041 aagacggtgc ggcaggtggt tttgaagcgg cgcaggtagt tttgtgcggg caggatggtc
     2101 ggcgaaatga tgacgcgttg tttgtcggtc agacggttta aaacggcgcg ggacaggctg
     2161 atgccgtctg aagcgagcag ggctttgatg cggaacgcgc cgtcgggcaa gcgtgcgatg
     2221 tattgtttga tttgattttc gcaaccgtcg ggcaggggca ggttgagggc ttgggcggag
     2281 gttttcagac ggcataggtg gcggtcgagc agggcgcagc gtccgttttc cacgcgcagg
     2341 gtttcaaaaa tgccgaagtc ggggcgcaat tcgttgagga aacgggcttt ccagccgcat
     2401 tcccgatatt cggcggcagg gtcgctgtcg atgacgatgc cggaaccgac accgtacacg
     2461 ccttgataaa tgccgtctga aagcggcgtg agcgacaagg tgcggataac gacgttgaac
     2521 gtgccttcaa accccaagcc gccggaacac gggttcaaat agccgatgct gcccgtataa
     2581 agtccgcgcg cttcggcttc gagcgattcg ataatctgca tactcatttt tttgggcgcg
     2641 ccggtgatgc tgccgcaggg gaaggcggcg cggaggatgt cggcgaacga ggtgtgcggc
     2701 aaggcttggg cttggatggt gctggtcatc tgccaaacgc tgccgaaacg cgatacttta
     2761 aacggttcgg gtacgcatac tgtgccggtt tgggcgattt tgccgaggtc gttacgcagc
     2821 aaatcgacaa tcatcacgtt ttcggcgcgg tttttcgggt ctgcttgcaa ctcggcggcg
     2881 cggcgttcgt cttgtccgtc gcccaaaatc ggcgcggtgc ctttcatcgg ttcggtgctg
     2941 atggtgccgt ccgaaccgat tttgaggaag agttcgggcg agaaacacag cgtccacgcg
     3001 gattgccctt gtgcatcggg caggtgggac aaaacggcat aggggacggg ctggcgcagg
     3061 cgttggtaaa gtttgacggg attgccgtag gcttgcaggt gcaggcgggt agtgtagttg
     3121 atttgatagg tgtcgccgcg tcggatggct tcgtggattt ggcggatatg gtcgaggtaa
     3181 tcggcttcgg atacggagga ttgcggcgtg gaaatgccgg cggggaggcc gtctgagtgt
     3241 cgggcaagcc agcttgcggc atcggtgtcg gcgcagtcgg caaaccagtg cagggcaagg
     3301 ttgccgccgc gttcggactc gacccccgtc agcggcaaac cgaatccgta gtctgcaaac
     3361 aacacggcat gcagcccttt ttgccagccc gattgcagcg cgccgtccaa agcatcgagt
     3421 tcttcgggac ggaaaaaacg gctttccaca tgattttgat agcgttttgc gcggccgctt
     3481 acggcatcgt caaacagggc gaaataaggc atggcaattc ggggcaaatg ttttgattat
     3541 acgctctttt tacacatatt ttcagacgat tcggcaaata tcggcaaaat gtaattttat
     3601 gtagagaaag tggggggcga aggtgtaaaa ttgtgaaaac aaattccgat ttccaacctg
     3661 aaatacaata aggagacctt tatgacagac caccagctgc aaccgtttga aaacgtagaa
     3721 ttaggcgaaa agcaagatca gctccaagta tagtggatta acaaaaacca gtacagcgtt
     3781 gcctcgcctt ggctcaaaga gaacgattct ctaaggtgct gaagcaccaa gtgaatcggt
     3841 tccgtactat ctgtactgtc tgcgtcttcg tcgccttgtc ctgatttttg ttaatccgct
     3901 ataaagaccg tcgggcatct g
//
LOCUS       DAWGKF010000176         3919 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.176, whole genome shotgun sequence.
ACCESSION   DAWGKF010000176 DAWGKF010000000
VERSION     DAWGKF010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3919)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3919)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3919
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.176"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            128..2713
                     /gene="acnB"
                     /locus_tag="WHR07_001865"
     CDS             128..2713
                     /gene="acnB"
                     /locus_tag="WHR07_001865"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HEZ2131036.1"
                     /translation="MLEAYRKAAAERAALGIPALPLNAQQTADLVELLKSPPAGEGEF
                     LVELLAHRVPPGVDDAAKVKASFLAAVAEGSASSPLISPEYATELLGTMLGGYNIHAL
                     IELLDDDKLAPIAAKGLKHTLLMFDSFHDVQEKAEKGNKYAQEVLQSWADAEWFTSRA
                     KVPEKITVTVFKVDGETNTDDLSPAPDAWSRPDIPLHALAMLKNPRDGITPDKPGEVG
                     PIKLLEELKAKGHPVAYVGDVVGTGSSRKSATNSVIWHTGEDIPFVPNKRFGGVCLGG
                     KIAPIFFNTQEDSGALPIEVDVSALKMGDVVDILPYEGKIVKNGETVAEFELKSQVLL
                     DEVQAGGRINLIIGRGLTAKAREALKLPASTAFRLPQAPAESKAGFTLAQKMVGRACG
                     LPEGQGVRPGTYCEPRMTTVGSQDTTGPMTRDELKDLACLGFSADMVMQSFCHTAAYP
                     KPVDVKTHKELPAFISTRGGVSLRPGDGVIHSWLNRLLLPDTVGTGGDSHTRFPIGIS
                     FPAGSGLVAFAAATGVMPLDMPESVLVRFSGKLQPGVTLRDLVNAIPLYAIKQGLLTV
                     AKAGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTVKLNKEPIIEYMKSN
                     VVLMKNMIADGYQDPRTLERRIKAMEKWLANPELLEADKDAEYAAVIEINMDDIKEPI
                     IACPNDPDDVCFMSERSGTKIDEVFIGSCMTNIGHFRAASKLLEGKADTPVRLWIAPP
                     TKMDAKQLSDEGHYGVLGRAGARMEMPGCSLCMGNQAQVREGATVMSTSTRNFPNRLG
                     KNTFVYLGSAELAAICSKLGKIPTVEEYQANIGIINEQGDKIYRYMNFNEIDSYNEVA
                     ETVNV"
     gene            2855..3850
                     /locus_tag="WHR07_001866"
     CDS             2855..3850
                     /locus_tag="WHR07_001866"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEZ2131037.1"
                     /translation="MNLKNRHFLKLLDFTPEEITAYLDLAAELKAAKKAGREIQRMKG
                     KNIALIFEKTSTRTRCAFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDG
                     IEYRGFAQETVEELTKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYV
                     GDARYNMGNSLLILGAKLGMDVRIGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAH
                     EAVKNVDFIHTDVWVSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAF
                     HNRETKVGEWIYETFGLNGVEVTEEVFESPASIVFDQAENRMHTIKAVMVAALGD"
BASE COUNT         1002 a         1140 c          992 g          785 t
ORIGIN      
        1 attacctgtc ataacagttc catttttgtt aaaactagtc tatgatagcg gtacaaatat
       61 tgtttacaat atttaacgca aatcatttgc aacccgacaa aagaaaaaca gaaaaaggaa
      121 caaagagatg ttagaagcct atcgtaaagc cgccgccgag cgcgccgccc tcggcattcc
      181 cgccctccct ttgaacgcgc agcaaaccgc cgatttggtt gagctgctga aaagcccgcc
      241 cgcaggcgaa ggcgagttct tggtcgaact gcttgcccac cgtgttccgc ccggtgtgga
      301 cgatgccgcc aaagtcaaag cctcattcct ggctgccgtt gccgaaggca gcgcgtccag
      361 cccgctgatc tcccccgaat atgcgaccga actcttaggt acgatgctcg gcggttacaa
      421 tatccacgcc ttaatcgaac tcttggacga cgacaaactc gcgcccattg ccgccaaagg
      481 cttgaaacat acgcttctga tgttcgattc cttccacgac gttcaggaaa aagccgaaaa
      541 aggcaacaaa tacgcgcaag aagttttgca atcttgggca gatgccgaat ggtttacctc
      601 acgcgccaaa gttcccgaaa aaatcaccgt taccgttttc aaagttgacg gcgaaaccaa
      661 tacagacgac ctctcccccg cgcccgacgc gtggagtcgt cccgatattc cgctgcacgc
      721 gctggccatg ctgaaaaacc cgcgcgacgg catcacgccc gacaaaccgg gcgaagtcgg
      781 tccgattaaa ttgttggaag aactcaaagc caaaggccat ccggttgctt acgtcggcga
      841 cgtggtcggt actggttctt cacgcaaatc cgcgaccaac tccgtcattt ggcataccgg
      901 cgaagacatt ccgttcgtgc cgaacaaacg cttcggcggc gtgtgcttgg gcggcaaaat
      961 cgcgccgatt ttcttcaata cccaagaaga ctccggcgcg ctgccgattg aagtcgatgt
     1021 ttccgctcta aaaatgggcg atgtcgtcga tatcctgcct tatgaaggca aaatcgtgaa
     1081 aaacggcgag actgttgccg agtttgaatt gaaatcacaa gtattgctgg acgaagtgca
     1141 agccggcggc cgtatcaacc tgattatcgg ccgaggtctg accgccaaag cgcgcgaagc
     1201 cctgaaactg cctgcctcta ctgcattccg cctgccgcaa gcgcctgccg aaagcaaagc
     1261 cggtttcacc ttggcgcaaa aaatggtcgg ccgcgcctgc ggtcttcccg aaggacaagg
     1321 cgtgcgtccg ggtacttact gcgaaccgcg tatgacgacg gtcggctcgc aagacacgac
     1381 cggcccgatg acccgcgacg agttgaaaga cttggcttgt ttgggcttct ccgccgatat
     1441 ggtgatgcag tctttctgcc acaccgccgc ctatccgaaa cctgtcgatg taaaaaccca
     1501 taaagaactg cccgccttta tttccacccg tggcggcgtg tccctgcgtc cgggcgacgg
     1561 cgtcatccac tcgtggctca accgcctgct gctgcccgat accgtcggca ccggcggcga
     1621 cagccacacc cgtttcccca tcggtatttc cttccccgcc ggctctggct tggttgcctt
     1681 tgccgccgca acaggcgtaa tgccgctcga tatgcccgag tctgtattgg tacgcttcag
     1741 cggcaaactg caaccgggtg taaccctgcg cgatttggtg aacgccattc cgctgtacgc
     1801 aatcaaacaa ggtttgctga ccgttgccaa agccggtaag aaaaacatct tctccggccg
     1861 catcctcgaa atcgaaggcc tgcctgattt gaaagtggaa caagcctttg aattgaccga
     1921 cgcatccgcc gaacgctccg ccgccggctg taccgtgaag ctcaacaaag agccgattat
     1981 cgagtacatg aaatccaacg tcgtgttgat gaaaaacatg attgccgacg gctatcaaga
     2041 cccgcgtact ttggaacgcc gcatcaaagc catggaaaaa tggctggcaa atcccgagtt
     2101 gctcgaagcg gataaagatg ccgaatacgc cgccgtgatt gaaatcaaca tggacgacat
     2161 caaagagccg attatcgcct gcccgaacga cccggacgac gtgtgcttca tgtccgaacg
     2221 ctccggcacc aaaatcgacg aagtattcat cggttcgtgt atgaccaaca tcggccactt
     2281 ccgcgccgcc tccaaacttt tggaaggcaa ggcagacacc cccgtccgcc tgtggattgc
     2341 gccgccgacc aaaatggacg cgaaacaatt gtccgacgaa ggacactacg gcgtactcgg
     2401 acgtgccggc gcgcgtatgg aaatgccggg ttgctcctta tgtatgggta atcaggcgca
     2461 agtacgcgaa ggtgcgaccg ttatgtccac ctccacccgc aactttccga accgtttggg
     2521 taaaaacacc tttgtttacc tcggttcggc ggaattggca gcgatttgct ccaaactggg
     2581 taaaatcccg accgttgaag aatatcaagc caatatcggc atcatcaacg aacagggcga
     2641 taaaatctac cgctatatga acttcaacga aatcgacagc tacaacgaag tagccgagac
     2701 cgtgaacgtt taatccccgt catccgtatg aagtaaggga ttgaccgcaa tgccgtctga
     2761 acaaccttca gacggcattg caacattccg ctaacccttc tttccgcaaa cgctgcaaat
     2821 acggcgttca cgcccccaca taaaggaaac gacagtgaac ctgaaaaacc gccattttct
     2881 gaaactttta gacttcacgc cagaagaaat caccgcctac ctcgaccttg ccgccgaatt
     2941 gaaagccgcc aaaaaagcag ggcgcgagat tcagcggatg aaagggaaaa acatcgccct
     3001 gatttttgaa aaaacctcta ctcggacgcg ctgcgcgttt gaagtcgccg cgcgcgatca
     3061 aggcgcggga gtgacttatt tagagccgtc cgccagccaa atcgggcata aggaaagcat
     3121 caaagacacc gcccgcgtgt tgggcaggat gtacgacggc atcgaatatc gcggcttcgc
     3181 tcaggaaact gtcgaagaat tgacgaaata cgcgggcgta cccgtgttca acgggctgac
     3241 caacgagttc catcccacac aaatgcttgc cgacgcactg actatgcgcg aacacagcgg
     3301 caaacctttg aaccaaaccg cgtttgccta cgtcggcgac gcgcgttaca acatgggcaa
     3361 ttccctgctg attttagggg caaaattggg gatggacgtg cgtatcggcg caccgcaaag
     3421 cctgtggccg tctgaaggca ttattgccgc cgcacacgcc gccgccaaag aaaccggcgc
     3481 aaaaattacc ctgaccgaaa acgcgcatga agccgtgaag aatgttgatt ttattcatac
     3541 cgatgtgtgg gtcagcatgg gcgagccgaa agaagtctgg caggaacgca tcgatttgct
     3601 gaaagattac cgcgttacgc ccgaactgat ggcggcatcg ggcaatccgc aagtcaaatt
     3661 catgcactgc ctgcccgcct tccacaaccg cgaaaccaaa gtcggcgaat ggatttacga
     3721 aaccttcggg ctgaacggtg tggaagttac agaagaagta ttcgaaagcc ccgccagcat
     3781 cgtgttcgat caggcggaaa accgtatgca cacgattaaa gcggtaatgg tcgcggcttt
     3841 gggcgactga cagaactgtg cctgtttaaa ttcatccgca acacagatac cgtctgaaca
     3901 cgatgttcag acggtatcc
//
LOCUS       DAWGKF010000177         3889 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.177, whole genome shotgun sequence.
ACCESSION   DAWGKF010000177 DAWGKF010000000
VERSION     DAWGKF010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3889)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3889)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3889
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.177"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(267..2693)
                     /gene="hupB"
                     /locus_tag="WHR07_001867"
     CDS             complement(267..2693)
                     /gene="hupB"
                     /locus_tag="WHR07_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemoglobin-haptoglobin-utilization protein HupB"
                     /protein_id="HEZ2131038.1"
                     /translation="MHIPFKPVLAAAAIAQAFPAFAADPAPQSARTLNEITVTGTHKT
                     QKLGEEKIRRKTLDKLLVNDEHDLVRYDPGISVVEGGRAGSNGFTIRGVDKDRVAINV
                     DGLAQAESRSSEAFQELFGAYGNFNANRNTSEPENFSEVTITKGADSLKSGSGALGGA
                     VNYQTKSASDYVSEDKPYHLGIKGGSVGKNSQKFSSITAAGRLFGLDALLVYTRRFGK
                     ETKNRSTEGDVKIENKGYVFSPTQPFSKYQTYVATGVARSRPDPQEWVNKSTLFKLGY
                     NFNDQNRIGWIFEDSRTDRFTNELSNLWTGTTTSAATGDYRHRQDVSYRRRSGVEYKN
                     ELEHGPWDSLKLRYDKQRIDMNTWTWDIPKNYDLRGINGEVYHSFRHIRQNTAQWTAD
                     FEKQLDFSKAVWAAQYGLGGGRGDNANSDYSYFAKLYAPKILASNQAKITMLIENRSK
                     YKFAYWNNAFHLGGNDRFRLNAGIRYDKNSSSAKDDPKYTTAIRGQIPHLGSERAHAG
                     FSYGTGFDWRFTKHLHLLAKYSTGFRAPTSDETWLLFPHPDFYLKANPNLKAEKAKNW
                     ELGLAGSGKAGNFKLSGFKTKYRDFIELTYMGVSSDDKNNPRYAPLSDDTALVSSPVW
                     QNQNRSAAWVKGIEFNGTWNLDSIGLPKGLHTGLNVSYIKGKATQNNGKETPINALSP
                     WTAVYSLGYDAPSKRWGINAYATRTAAKKPSDTVHSNDDLNNPWPYAKHSKAYTLFDL
                     SAYLNIGKQVTLRAAAYNITNKQYYTWESLRSIREFGTVNRVDNKTHAGIQRFTSPGR
                     SYNFTIEAKF"
     gene            complement(2724..3794)
                     /locus_tag="WHR07_001868"
     CDS             complement(2724..3794)
                     /locus_tag="WHR07_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemoglobin-haptoglobin-utilization protein"
                     /protein_id="HEZ2131039.1"
                     /translation="MKYKALSLLPLAAALAACAGGVAEPHVPVSIPTATPLTGEVKLS
                     SDNSKIENINTANTETHPPRRTRRSLYASPQNTSSGISIQQREVEKIYFGVKSPEKSF
                     IFQTPGGAQYALSSYADPIVPSYSSPDFKIPDRHAGQRLADGSRIFICCSDSGATSYA
                     EITKQDYMKFGAWIGPNGEIDLFAGGFPIGKTPPPAFSWGSPTTETALSKGKITYQVW
                     GIRVRNGQFVTSSYTPPKGSSWSGYQNTPVLSFITANFNSNKLAGEIRGNSDYGPDVE
                     IKEAQIDGLSFSGDATSGGKTGKLEGKFFGKFNGYRDTETSIGGKITFDGDRSLDTVF
                     GGVSYKKELENNTDTSTTHLTK"
BASE COUNT          732 a          895 c         1213 g         1049 t
ORIGIN      
        1 ggtgcaggtt tctgtgcgga tagcttcgtc attcccgcgc aggcgggaat ccaggttcgt
       61 tgagtttcag tcatttccga taaattcttg cagctttgcg tttctagatt cccacttccg
      121 tgggaatgac ggagagtcgc gggaatgacg gagagttgcg ggaatgggct tggtacaagc
      181 ctgaaagggg gcggcggtgc gaccgtaaaa aatgccgtct gaaacccaaa tcatcgggtt
      241 tcagacggca ttggcacatc aggagcttag aacttcgctt cgatggtgaa attgtagctc
      301 ctgcccggcg aggtaaagcg ttggatgccg gcgtgggttt tgttgtcaac gcggttgacc
      361 gtgccgaact cgcggatgct gcgtaaagat tcccaagtgt agtactgctt gttggtaatg
      421 ttgtacgcgg cggcgcggag cgtaacctgt ttgccgatgt tgaggtaggc ggaaaggtcg
      481 aacagcgtat aggccttgct gtgtttggca taaggccacg ggttgttcaa gtcgtcgttg
      541 ctgtggacgg tgtcggacgg ctttttggcg gcggtgcgcg tggcgtaggc gttgatgccc
      601 caacgtttgg aaggagcgtc gtagcccagg ctgtaaaccg ccgtccacgg cgaaagcgcg
      661 ttgatgggcg tttctttgcc gttgttttgc gttgccttgc ccttgatgta gctgacgttg
      721 aggccggtgt gcagcccttt gggcaaaccg atactgtcga ggttccacgt gccgttaaac
      781 tctatgcctt tcacccaggc ggcggagcgg ttttggtttt gccaaacggg cgagctgacc
      841 aatgccgtat cgtctgaaag cggggcgtat ctggggttgt ttttatcgtc tgacgaaacg
      901 cccatatacg tcaattcgat aaagtcgcgg tatttggttt tgaagcccga gagcttgaag
      961 ttgcccgctt tgccgctgcc cgccagaccc aattcccagt ttttggcttt ttccgctttc
     1021 aggtttgggt tggctttcaa gtagaaatcg gggtgtggga acagcagcca ggtttcgtcc
     1081 gaagtcggtg cgcggaagcc ggtgctgtat tttgccaaca agtgcagatg cttggtaaac
     1141 cgccagtcga accccgtgcc gtagctgaag cccgcgtgcg cgcgttccga acccaaatgg
     1201 ggaatctgcc cccggatggc ggtggtgtat ttcggatcgt ctttcgcgct gctgctgttt
     1261 ttgtcgtagc gtatgcccgc gttcaggcgg aagcggtcgt tgccgcccaa gtgaaacgca
     1321 ttgttccaat aggcaaattt atatttcgac cggttttcga tcagcattgt gattttggct
     1381 tggttggaag cgaggatttt gggggcgtac agttttgcga aatagctgta atccgagttg
     1441 gcattgtccc ctctgccgcc gcccaagccg tattgcgccg cccaaacggc tttggaaaag
     1501 tcgagttgtt tttcaaaatc ggcagtccat tgcgcggtgt tttggcggat atgccggaac
     1561 gaatggtaaa cctcgccgtt gatgccgcgc aaatcgtaat ttttcgggat gtcccaagtc
     1621 caagtgttca tatcgatgcg ctgcttgtcg tagcgcagct tgaggctgtc ccacgggccg
     1681 tgttccaatt cgtttttgta ttcgacaccg gagcggcggc ggtagctcac gtcttggcgg
     1741 tggcggtagt cgcccgttgc ggcagacgtg gtcgtacccg tccacaaatt agacagctcg
     1801 ttggtaaaac ggtcggtgcg cgagtcttca aaaatccagc cgatacggtt ttgatcgttg
     1861 aagttgtagc ccagcttgaa cagggtgctt ttgtttaccc attcttgcgg gtcgggtcgg
     1921 gagcgcgcaa cccctgtggc aacataggtc tggtacttgc tgaatggttg ggttgggctg
     1981 aaaacatacc ccttgttttc aattttgaca tcgccctcgg tcgagcggtt tttggtttct
     2041 ttgccgaagc ggcgggtata aaccaataag gcatccaaac caaagagccg gccggcggcg
     2101 gtgatgctgc tgaacttttg gctgtttttg ccgacgctgc cgccctttat ccccaaatgg
     2161 tagggcttgt cttcggaaac atagtcgctt gcggatttgg tctgataatt gactgcgccg
     2221 cccaatgcgc cgctgccgga tttgagcgag tccgcgcctt tggtgatggt aacttccgag
     2281 aagttttcgg gttcggaagt attgcggttg gcattgaagt tgccgtatgc gccgaacaat
     2341 tcttggaagg cttcagacga cctgctttct gcttgtgcca gtccgtccac attgatggcg
     2401 acgcggtctt tatcgacacc gcgtatggta aagccgttgg agcccgccct gccgccttcg
     2461 acgacggaaa tgccggggtc gtagcgcacc aggtcgtgtt cgtcgttgac caagagcttg
     2521 tctaaggttt tgcggcggat tttttcttcg ccgagttttt gggttttgtg cgtgccggta
     2581 acggtgattt cgttcagcgt tcgggcggac tgcggcgcgg ggtctgccgc aaaggcggga
     2641 aacgcttggg cgatggcggc ggcagccaat acgggcttga aggggatgtg cataagaaaa
     2701 cctttttaaa agcggattga ttattatttt gtgagatggg tggtacttgt atcagtgttg
     2761 ttttcaagtt cttttttata actcacaccg ccgaatacgg tatcgaggga gcggtcgccg
     2821 tcaaaggtga ttttgccgcc tatgctggtt tcagtgtccc ggtagccgtt gaattttcca
     2881 aaaaacttgc cttccaattt gccggttttg ccgccggagg tggcatcgcc ggaaaaggat
     2941 aatccgtcaa tctgtgcttc tttaatttcc acatccggcc cgtaatcgct gttgccgcgg
     3001 atttcgcctg ccagtttgtt gctgttgaaa ttggcggtga taaaggaaag gacgggggtg
     3061 ttttgataac cactccaaga gctgcctttg ggcggcgtat aagaggaagt aacaaattgc
     3121 ccgtttctga cgcggatgcc ccaaacctga taagtgattt tgccttttga caatgcggtt
     3181 tcggtcgtgg ggctgcccca ggagaacgca ggaggcggcg ttttgccgat ggggaagccg
     3241 ccggcgaaga ggtcgatttc gccgttgggg cctatccacg ccccgaattt catataatct
     3301 tgtttggtaa tttccgcata cgaagtagcc ccggagtcgc tgcagcagat aaagatgcgg
     3361 ctgccgtcgg caagccgctg ccctgcgtgg cggtcgggaa ttttgaagtc gggggaggag
     3421 tagctgggga cgatggggtc ggcgtaggat gaaagggcgt attgcgcgcc gccgggtgtt
     3481 tggaagatga atgatttttc tggtgattta acaccgaaat agattttttc tacttcccgc
     3541 tgctgaatgg aaataccgga ggatgtgttt tgcggggagg catagaggga gcgtctggtg
     3601 cggcgcggcg gatgtgtttc agtgttggcg gtgttgatgt tttcgatttt gctgttatcg
     3661 cttgataact ttacctcacc ggtcagcggc gtggcggtgg ggatggacac ggggacgtgc
     3721 ggttcggcta cccccccggc acaggcggca agggcggcag caagcggcag taaggagagg
     3781 gctttgtatt tcatcgcata ctcaatcttg atgatgtgtt aataatagtt ttgattatca
     3841 gtttaaatgt tatatgatgt caactggttt tgtgggtcgg tgcaaaaat
//
LOCUS       DAWGKF010000178         3861 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.178, whole genome shotgun sequence.
ACCESSION   DAWGKF010000178 DAWGKF010000000
VERSION     DAWGKF010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3861)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3861)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3861
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.178"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            490..1446
                     /gene="thiL"
                     /locus_tag="WHR07_001869"
     CDS             490..1446
                     /gene="thiL"
                     /locus_tag="WHR07_001869"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HEZ2131040.1"
                     /translation="MKEFDFIKRYLQTGTDKDVVLGIGDDAAIVRPREGFDLCFSADM
                     LLKDRHFFADVKPEDLAWKVLAVNISDMAAMGAIPRWVLLSAALPELDEVWLERFCGS
                     FFGLAKKFGVTLIGGDTTKGDMAFNVTIIGELPKGRALRRDAAVAGDDIWVSGRVGMA
                     AAALNCRLKRCVLPDDVFAECEQKLLRPEPRVGLGLALLPFARAAQDVSDGLAQDLGH
                     ILTASGVGAEIWADSLPSLSVLKDILPRAQWLSYTLAGGDDYELVFTAPESCRSRVLD
                     AAERCGVPVTRIGKINGGCRLKVLDADGRELELHSLGFDHFG"
     gene            1439..1924
                     /locus_tag="WHR07_001870"
     CDS             1439..1924
                     /locus_tag="WHR07_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HEZ2131041.1"
                     /translation="MADFKPDFAWLLKRPLCFLAFGFGSGLAPFAPGTFGTLAALPLA
                     FVLILLGIDGLLLAFLCIVLFMWGIRICAYAERETGVSDHGGIVWDEIVAMLFVLAFV
                     PFRWTWWLAAFVLFRLFDALKPSPVGWFDKNLHGGLGIMADDMAAAVMTLIVLRIAML
                     F"
     gene            complement(1984..3660)
                     /gene="ettA"
                     /locus_tag="WHR07_001871"
     CDS             complement(1984..3660)
                     /gene="ettA"
                     /locus_tag="WHR07_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HEZ2131042.1"
                     /translation="MSQQYVYSMLRVSKVVPPQKTIIKDISLSFFPGAKIGLLGLNGA
                     GKSTVLRIMAGVDKEFEGEAVPMGGIKIGYLPQEPELDPEKTVREEVESGLGEVAAAQ
                     KRLEEVYAEYANPDADFDALAEEQGRLEAIIAAGSSTGGGAEHELEIAADALRLPEWD
                     AKIDNLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAV
                     THDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKEKRLENEAKSEAARVKAMKQEL
                     EWVRQNAKGRQAKSKARLARFEEMSNYEYQKRNETQEIFIPVAERLGNEVIEFVNVSK
                     SFGDKVLIDDLSFKVPAGAIVGIIGPNGAGKSTLFKMIAGKEQPDSGEVKIGQTVKMS
                     LIDQSREGLQNDKTVFDNIAEGRDILQVGQFEIPARQYLGRFNFKGSDQSKITGQLSG
                     GERGRLHLAKTLLGGGNVLLLDEPSNDLDVGTLRALEDALLEFAGSVMVISHDRWFLD
                     RIATHILACEGDSKWVFFDGNYQEYEADKKRRLGEEGTKPKRIKYKPVTR"
BASE COUNT          784 a          943 c         1079 g         1055 t
ORIGIN      
        1 gaggcaacgc tgtactggtt taaatttaat ccactatatc ggttgaaact ctgattttaa
       61 ggcggtagga tgtgggtttg cccatagaaa gggaatcctt tctgtatcaa gccctgaaag
      121 ggataattca tacaaattca cgcctttccc cttcattggg aaatggatgg aatcgtgcca
      181 gatgtgtgcg gcactgtatg ccggatatgg ttttatcatc agcccttttc ggttgaaacc
      241 ccgtcagttg cagcgattga gcctaatcgg tggcggaagt tgccgctttg cattcggggt
      301 ggcgtgcagt gcggtgcttt gatatgccgt ttgtgtgttg aaacagggtg gtcggtgcat
      361 acgggtacgg tatggccaaa gctaaaagtg aaatacgctg aaacactgaa tgagccgctt
      421 tattgtttgt acggcctttg ctgccttgct atgatttaaa ttggattcgc ccgccggata
      481 ttttgggata tgaaagaatt tgacttcatc aaacggtatt tgcaaacagg cacggataag
      541 gatgtcgtat tgggcatagg cgacgatgcg gcgattgtcc gcccgcgtga aggcttcgat
      601 ttgtgtttca gtgcggatat gcttttgaag gacaggcatt tttttgccga tgtcaaacct
      661 gaggacttgg cttggaaggt tttggccgtc aatatttcag atatggcggc gatgggcgcg
      721 ataccgcgtt gggtgttgtt aagtgcggct ttgcccgaat tggatgaggt atggctggaa
      781 cggttttgcg gcagcttttt cggtttggca aaaaagtttg gcgtaacgtt aatcggcggc
      841 gatacgacca agggcgatat ggcgttcaat gtaaccatta tcggcgaatt gccgaagggt
      901 agggcattgc ggcgtgatgc ggcggttgcg ggcgacgata tttgggtgtc ggggcgtgtc
      961 ggtatggcgg cggcggcttt gaactgccgt ctgaaacggt gtgtgttgcc ggatgatgtg
     1021 tttgccgaat gcgaacaaaa gctgctccgc cccgagccaa gggttgggct ggggcttgcg
     1081 ctgttgccgt ttgcccgggc ggcgcaggat gtttcagacg gcctcgcgca agatttgggg
     1141 catatcctga ccgcttccgg cgtgggggcg gaaatttggg ccgattcgct gccgtcttta
     1201 tccgtattga aagatatttt gccccgagcg caatggctgt cttatacttt ggcgggcggc
     1261 gacgattacg agctggtgtt taccgcgccg gaaagttgcc gcagccgcgt gcttgatgcg
     1321 gcagaacggt gcggcgtgcc ggtaacgcgc atcggcaaaa tcaacggagg atgccgtctg
     1381 aaggttttag atgccgacgg cagggaattg gaactacatt ctttaggatt cgatcatttt
     1441 ggctgatttt aaacctgact ttgcgtggct gttgaaacga ccgttgtgtt ttttggcttt
     1501 tggtttcggc agcgggctgg ctccgttcgc gccgggtaca tttggcactt tggcggcact
     1561 gcctttggca tttgtgctga ttttgctcgg catagacggg ctgctgctgg cttttttgtg
     1621 tatcgtgctg tttatgtggg gcatacgcat ttgcgcttat gcggaacgtg aaacgggtgt
     1681 cagcgaccat ggtgggattg tttgggacga gattgtcgcc atgctgtttg tgctggcgtt
     1741 tgtgccgttc aggtggacgt ggtggctggc ggcatttgtc ctattccgtc tgtttgacgc
     1801 gctcaaaccg tctcccgtcg gttggtttga caagaatctg cacggcggtt tgggcattat
     1861 ggcggacgat atggcggctg cggtgatgac tttgattgtc ttgaggattg caatgctgtt
     1921 ttaaacggtg ctgccttgta aaaatgccgt ctgaaagcct ttcagacggc attgtttcgg
     1981 aggttaacgc gttaccggtt tgtatttgat gcgtttcggt ttcgtgcctt cttcgccgag
     2041 tcggcgtttc ttgtcggctt cgtattcctg atagttgccg tcaaagaaca cccatttgga
     2101 gtcgccttcg caagccaaga tatgcgtagc aatacggtcg aggaaccagc ggtcgtgcga
     2161 aatcaccatc acgctgccgg caaattccag caatgcgtct tccaacgcgc gcagggttcc
     2221 cacgtcgagg tcgttggacg gttcgtccag cagcaacaca ttgccaccgc ccaacaaggt
     2281 ttttgccaag tgcaaacgtc cgcgttcgcc gccggaaagc tgccccgtga ttttgctttg
     2341 gtcgctgcct ttgaaattga agcgtcccaa atattggcgg gcggggattt caaactgccc
     2401 gacctgtaaa atatcgcgac cttcggcaat gttgtcgaac acggttttgt cgttttgcaa
     2461 accttcgcgg ctttggtcaa tcaagctcat tttcacggtt tgcccgattt tcacttcacc
     2521 agaatcgggc tgctctttgc ccgcaatcat tttaaacagt gtcgatttac ccgcgccgtt
     2581 cggaccgatg atgccgacaa tcgcgcccgc aggcactttg aagctcaaat cgtcaatcag
     2641 cactttgtcg ccgaacgatt tggaaacatt cacaaattca atcacttcgt tacccaaacg
     2701 ctcggcgacg ggaatgaaga tttcctgcgt ttcattgcgt ttttggtatt cgtagttgct
     2761 catttcttca aaacgagcca aacgcgcttt ggacttggct tggcggcctt tggcattttg
     2821 gcgcacccat tccaattcct gcttcatcgc cttcacgcgc gcggcttcgg attttgcctc
     2881 gttttccaag cgtttttctt tctgctccag ccaagacgag taattgcctt tccacggaat
     2941 accatggccg cggtcgagtt ccaaaatcca ttcggcggcg ttgtcgagga agtagcggtc
     3001 gtgtgttacc gcaacgactg taccggggaa gcgcacgaga aattgctcca gccactcgac
     3061 agattccgcg tccaagtggt tggtcggctc gtccagcaaa agcatatcgg gtttgctcaa
     3121 caagagtttg cacaaggcaa cgcggcgttt ttcaccgccg gacaaattat cgattttggc
     3181 atcccattcc ggcaggcgca gcgcgtcggc ggcgatttcc aattcgtgtt ccgcaccgcc
     3241 gcccgtggac gaacctgccg caataatcgc ttccaagcgg ccctgctctt ctgccaacgc
     3301 gtcaaaatcc gcatcaggat tggcgtactc ggcatacact tcttccaaac gtttctgcgc
     3361 ggcagccact tcgcccaaac cgctttccac ttcctcgcgc acggtttttt caggatcaag
     3421 ctcaggctct tgcggcaggt agccgatttt aatgccgccc atcggcacgg cttcgccctc
     3481 aaattcctta tccacacccg ccataatccg cagcacggtg gacttgcccg cgccgttcaa
     3541 accgagcagg ccgattttcg cgccggggaa gaaagaaagg gaaatatctt taatgatggt
     3601 tttctgcggc ggcacaacct tgcttacgcg cagcatagaa tagacgtatt gttgggacat
     3661 ggttttctcg ttttcatcaa acaaatttca gacggccatt ttaaccgata atttgattta
     3721 agccagttta tccgcgaacc ggtattgcca aaatcgggca ggattcataa aatccgccta
     3781 tccctttgaa attatacaga caaaaaaaat aataatgata ggagatcgcc gcaccggcaa
     3841 ccatttcgga ttttccaaag c
//
LOCUS       DAWGKF010000179         3851 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.179, whole genome shotgun sequence.
ACCESSION   DAWGKF010000179 DAWGKF010000000
VERSION     DAWGKF010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3851)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3851)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3851
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.179"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(88..906)
                     /locus_tag="WHR07_001872"
     CDS             complement(88..906)
                     /locus_tag="WHR07_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ2131043.1"
                     /translation="MKGMDKLRYQQDFLNIRPIFTAGEQEYLTGLSDRLPLSVLTGSV
                     RNIEEIGIDFVYSSAKLEGNTYNQYDTQALLKLGQTAGGKLYSDAVMLINLRESYRHL
                     LSGLDSPEPFDWLDFLKTTHSLISENLLEKGSGGVVRRDSVTISGTDYTPLSNPQSLD
                     TELKWLLQEAPKIENPFDRAVYLHNNLAYLQYFKDCNKRTARNCMTLSLMRSGFFPCV
                     FAPDSYPAYAEAVVAYYETGDYGLFKKYFISAYENTVNKYGPQPDMDISRNFSL"
     gene            complement(973..2223)
                     /locus_tag="WHR07_001873"
     CDS             complement(973..2223)
                     /locus_tag="WHR07_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEZ2131044.1"
                     /translation="MTKLTRRQIIRRTAGTLFALSPIASAVAKTVRAPQFTAVRIWPS
                     HTYTRLTLESTTALKYQHFTLDNPGRLVVDIQNANINTVLHGLSQKVMADDPFIRNIR
                     AGQNTPDTVRLVIDLKQPSYAQVFSLPPVGGFKNRLVVDLYPQGMDPDDPMMALLNGS
                     LNKTRRGSPEADLAQNTPAQTERGKNGRRPVIMIDPGHGGEDPGAVSPGGLQEKHVVL
                     SIARETKKQLEALGYNVFMTRNEDVFIPLGVRVAKGRARRADVFVSIHADAFTSPSAR
                     GTGVYMLNTKGATSSAAKFLEQTQNNADAVGGVPTSGNRNVDTALLDMTQTATLRDSR
                     KLGKLVLEELGRLNHLHKGRVDEANFAVLRAPDMPSILVETAFLSNPAEEKLLGSESF
                     RRQCAQSIASGVQRYINTSVLKRG"
     gene            complement(2220..2681)
                     /gene="tsaE"
                     /locus_tag="WHR07_001874"
     CDS             complement(2220..2681)
                     /gene="tsaE"
                     /locus_tag="WHR07_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEZ2131045.1"
                     /translation="MSDFPPVSRFLADEAATLDLGAAWSSRLNAPLVIYLEGDLGAGK
                     TTLTRGILRGLGHQGAVKSPTYAIVESYPLERFTLHHFDLYRFSFPEEWEDAGLDELF
                     AANSVCLIEWPQQGGEFTPPADITATLTHDGGGRKCLLTAHTERGRESLPL"
     gene            2871..3683
                     /locus_tag="WHR07_001875"
     CDS             2871..3683
                     /locus_tag="WHR07_001875"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HEZ2131046.1"
                     /translation="MENIGRQRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARV
                     PYGTKSKATIENFSMQIVDFLLEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVIS
                     AGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGW
                     LEHEVTRLTVCEYLKPLLADGIDTLVLGCTHFPLLKPLIGREAHNVALVDSAITTAEE
                     TARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLGRTMEQIEMVSLG"
BASE COUNT          846 a          967 c         1136 g          902 t
ORIGIN      
        1 cactataacc gaaggtaagg gaggggtgtg tccactgtgc cgccgcattt gccgcgtgcg
       61 gaagatacgg ataacaaccc cttggaatta aagggagaag ttgcgggaaa tatccatatc
      121 aggctgggga ccgtacttat ttacggtatt ttcgtatgcc gaaataaaat atttcttgaa
      181 taaaccgtaa tcgccggttt cgtaataggc tacgacagcc tcggcatagg cgggataact
      241 gtcgggggcg aatacgcaag gaaaaaaacc ggagcgcatc agcgacaagg tcatgcagtt
      301 tctggcagta cgtttattgc aatctttaaa atattgaaga tacgccaaat tattatggag
      361 ataaacggcg cggtcgaaag gattttctat tttgggagct tcttgaagca accattttaa
      421 ttccgtatcc aaactttgcg ggttagataa aggggtgtag tctgtcccgc ttatggtaac
      481 gctgtcgcgg cggactacgc cgccggagcc tttttccagt aagttttcgg aaatcaggct
      541 gtgggtggtt tttaagaaat ccaaccagtc aaacggctcg gggctgtcca aaccggacag
      601 caggtgccgg taactttccc tcaggttgat taacattacg gcatccgaat ataacttccc
      661 gcctgcggtt tgcccgagtt taagcaatgc ctgcgtatcg tattgattat aagtgtttcc
      721 ttccaatttg gcagaactat atacaaaatc gataccgatt tcttcaatat tacgcacgga
      781 gcccgttaaa acagataaag gaagccgatc ggacaatccg gtcaggtatt cttgttcgcc
      841 ggctgtaaaa atggggcgga tatttaaaaa atcctgttgg tatctcaatt tatccatacc
      901 tttcatcata aaaacgcggt ttggggcgga agtaggttta tgcctgcctt catccgacta
      961 ccgccttttc aatcaacccc gcttcaatac ggatgtattg atgtagcgtt ggacacccga
     1021 ggcaatggat tgggcgcact gccggcggaa ggattcgctg cccagcaact tctcttcagc
     1081 agggttggac aggaaggcgg tttcgaccag gatagacggc atatcgggtg cgcgcaaaac
     1141 ggcgaaattg gcttcgtcca ccctgccttt gtgcaagtgg ttgagcctgc ccaattcttc
     1201 aagcaccagt ttgccgagtt tgcggctgtc gcgcagcgtg gcggtttggg tcatatcgag
     1261 cagggcggta tcgacgttgc ggttgccgct ggtcggtacg ccgccgaccg cgtcggcatt
     1321 gttttgcgtc tgttccaaga atttggcggc ggagctggtc gcgcctttgg tgttcagcat
     1381 atagaccccc gttccgcgcg cggaggggct ggtgaaagcg tcggcgtgga tggagacgaa
     1441 tacgtccgcc cgccgtgctc gccctttggc gacacgcacg cccaatggga tgaacacgtc
     1501 ttcgttgcgc gtcataaaga cgttgtaacc caaggcttcc aattgttttt tggtttcgcg
     1561 ggcgatggag aggacgacgt gtttttcctg caaaccgccc gggctgacgg cgccggggtc
     1621 ttcgccgccg tgtccggggt cgatcataat gacgggtctg cgcccgtttt tgccgcgttc
     1681 ggtttgtgcg ggagtgtttt gagcgaggtc ggcttcaggg gagccgcgac gggttttgtt
     1741 caggctgccg ttaagcagcg ccatcatcgg atcgtcggga tccatccctt gcggatagag
     1801 atcgacgacg aggcggtttt taaagccgcc gacggggggg agggaaaaaa cttgcgcgta
     1861 ggaaggctgt ttcaaatcga tgacgaggcg gacggtgtcg ggcgtgttct gaccggcgcg
     1921 tatattgcgg ataaaggggt cgtccgccat aaccttctga gacagtccgt gcaatacggt
     1981 attgatgttc gcgttttgta tgtcgacgac caacctgccc gggttgtcga gcgtgaagtg
     2041 ttggtatttg agcgcggttg tgctttccag cgtcaggcgg gtgtaggtgt gcgacggcca
     2101 tatccgtacg gcggtaaact gcggggcgcg taccgttttg gcaacggcgg atgcgatggg
     2161 gcttagggcg aacagtgtgc cggcggtgcg gcggatgatt tgtcttcgtg tcagtttggt
     2221 catagcggca ggctttcgcg tcctcgttcg gtatgggcgg tcagcaggca ttttctgccg
     2281 ccgccgtcgt gtgtcaatgt tgcggtgatg tcggcgggcg gggtaaattc gcctccctgt
     2341 tgcggccatt cgatcaggca gacgctgttt gcggcaaaca gttcgtcaag ccccgcgtct
     2401 tcccattctt cggggaacga gaagcggtag aggtcgaaat ggtgcagggt gaagcgttcc
     2461 agcggataag attcgacgat ggcgtaggtc gggcttttga ctgcgccctg atgacccaat
     2521 ccgcgcagga tgccgcgtgt cagcgtggtt ttgcccgcac ccaaatcccc ttcgagataa
     2581 atgaccagcg gtgcgtttaa acgggaagac cacgccgcac ccaaatcgag tgtggcggct
     2641 tcgtcggcaa ggaatcggga aacgggagga aaatcagaca taggggcttt acaactttta
     2701 tgtggcggat cggaggggca ggcggtcggc aaaccgtgcg cccggcggca gcattgccgt
     2761 acattataac agccaaatcc gcatcctgct ttcagacggc aacggctgtc aagaaaaagc
     2821 ggcgcgtgta caatacgcgg attgtatgtt taggacggat tggaaaaaga atggaaaata
     2881 tcggcaggca gcgacccatc ggcgtttttg actcgggaat cggcggtttg accaatgtgc
     2941 gagcgctgat ggaacggctg ccgatggaga acatcattta tttcggcgac acggcgcgcg
     3001 tgccttacgg gacgaaatct aaggcgacca tcgaaaattt ctcgatgcag attgtcgatt
     3061 ttttattgga acacgatgtc aaggcgatgg ttatcgcgtg caatacgatt gcggcggtgg
     3121 cggggcagaa aatccgtcaa aaaaccggca atatgcccgt tttggacgtg atttccgccg
     3181 gcgcgaaagc cgcgctggca acgacgcgca acaataaaat cggcattatc gccaccaata
     3241 cgacagtcaa cagcaacgcc tatgcgcgcg ccatccacag gaacaacccc gatacgctcg
     3301 tccgcacgca ggccgcgccg ctgctcgtcc ctttggtgga ggaaggttgg ttggaacatg
     3361 aagttacccg cctgaccgta tgcgaatacc tcaaaccatt gcttgcggac ggcatcgata
     3421 cgctggtgtt gggctgcacg cactttccct tgctcaaacc cttaatcggc agggaggcgc
     3481 acaatgtcgc actggtcgat tccgcgatta cgactgccga agaaaccgca cgcgtccttg
     3541 cgcaggaggg attactcaat accgacaaca acaatcccga ctaccgtttt tatgtcagcg
     3601 atattccttt gaaattcaga accatcggcg agcgttttct gggcaggacg atggagcaga
     3661 ttgaaatggt gtctttgggt tagcggcagg tacggacgga aaccgtcccc gtccgcgcca
     3721 tccgcatacg cacccgcaac gccctgccgt attaaacgcc ccgtcgccgc aaatgccgtc
     3781 tgaaaggctt cagacggcat tttttacaca attcccaccg tttcccatcc ttctcgatac
     3841 actgtaatct c
//
LOCUS       DAWGKF010000180         3729 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.180, whole genome shotgun sequence.
ACCESSION   DAWGKF010000180 DAWGKF010000000
VERSION     DAWGKF010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3729)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3729)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3729
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.180"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..399)
                     /locus_tag="WHR07_001876"
     CDS             complement(<1..399)
                     /locus_tag="WHR07_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T cell/B cell stimulating protein TspB"
                     /protein_id="HEZ2131047.1"
                     /translation="MFLILGRNFLKIILCFSFFVPKFALASVNVPGKFDRVEVYDDGR
                     YLGIRGSDDKRRRIWKGVFDRESGRYLTSEAQDLKVRHVSTGASSTGKVSSVVSSSVS
                     RAAVLAGVGKLARLGAKFSTRAVPYVGTALL"
     gene            complement(746..1048)
                     /locus_tag="WHR07_001877"
     CDS             complement(746..1048)
                     /locus_tag="WHR07_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131048.1"
                     /translation="MGYRVGMNCFDTRLQADDYLLSSLPPTVTEEGKIIRPERVGDKW
                     ILNGKPVTLSYPECSNFEQIKQGSYVGSTVLILFVVIFGFRLLINFLKDMGKVGTD"
     gene            complement(1076..1306)
                     /locus_tag="WHR07_001878"
     CDS             complement(1076..1306)
                     /locus_tag="WHR07_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131049.1"
                     /translation="MNIVKKYAVKALLAAGIFTPAIVMADGFDAAAIGTQVANVIMGF
                     VAMVSAVGMAAITVILAIQGFKMAWSMIKSVK"
     gene            complement(1544..1744)
                     /locus_tag="WHR07_001879"
     CDS             complement(1544..1744)
                     /locus_tag="WHR07_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131050.1"
                     /translation="MKFEERFIVQDLETHDFIYPDPFGDVGFTQNIKSAGQFESYEDA
                     LNSGINEMGGGFQIFQFFVKSE"
     gene            complement(1748..2059)
                     /locus_tag="WHR07_001880"
     CDS             complement(1748..2059)
                     /locus_tag="WHR07_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131051.1"
                     /translation="MFNQNQTVTYPATFLGAKKFKGEIDGSNIDTCSVLVATPLPAQS
                     GNAVGFTAAQMKFGDSKNFSRLENLKYPCEVMVTVEMTSTGKGMVPSLIDFQVAEKPK
                     G"
     gene            complement(2071..3285)
                     /locus_tag="WHR07_001881"
     CDS             complement(2071..3285)
                     /locus_tag="WHR07_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HEZ2131052.1"
                     /translation="MSEVEYFSHFISDGKGKLLEIPQRRGKQDGVFVDWISFTFHEDT
                     LLKVSGCPLFSDAEYMYVLSRKLEEILGFGITRKCKSRGNKFYESMYRLGSDDVDYGE
                     VHFGGQRNTVLVELKGTGCSVASPGWELRLKQFLDDSIRTRITRIDLALDFFDGEYTP
                     DQALLDHDNGFFDNSNQRPKSETIGTAWRNEDGSGKTFYVGRKKNSRFVRVYEKGRQL
                     GDKESKWVRFEIQFNYGDIEIPLDILINQGSYFCGAFPICRKFKNMPVPERFDQRKKT
                     LNLTFEHKLHYAKNAVGKLVNFMIEMGFDNSEIVESLKADSGFPKGLEPEKYALEMLR
                     DGLKHGFIHEQPDIDLEIELDELGVIAFKNSDKFDREKRLFSPDYDAEKERKYQDYLD
                     EVYHQNVNYDYF"
BASE COUNT         1181 a          874 c          565 g         1109 t
ORIGIN      
        1 taaaagggct gttccgacat agggaaccgc ccttgtgctg aatttcgcgc ctaagcgggc
       61 aagtttgccg actcctgcca agacggcggc gcgggaaact gatgaagata caaccgaact
      121 aactttaccc gtacttgatg ctccagtaga tacatgccta acttttaaat cttgagcttc
      181 tgaagttaaa tatcttcccg attctctatc aaatacacct ttccaaattc ttcttctttt
      241 gtcatctgaa cctcgaatac ctaaatatct gccatcatca taaacttcaa ccctatcaaa
      301 tttacccgga acatttactg atgccaatgc aaatttaggt acaaaaaaac taaagcatag
      361 gataatcttt aaaaaatttc gccctaggat aagaaacata acattttgct tcatctaatt
      421 taattaataa tgtagaagaa tcagggaatt gaatttctat aaaatctcta tcataacgat
      481 gaaagaaatt cctaaaaata tcaaatgaaa acgaagtttt aaaaacccct tttctaatca
      541 attccctata ataaattaac gcttgtggta aatctctata aatatgtgaa tcagtttgaa
      601 atttaactaa atgatattca gaaataaaca taattcggac cttttaaaac actctaaaaa
      661 gccgattcta ccaaccgtta ccaaaacagc caagcaacag acaaagccaa gaagaaaccg
      721 agaagaaacc aaaaatcaat aatcatcaat cagtaccaac cttgcccatg tcttttaaga
      781 aattaatcag aagcctgaaa ccgaaaatga ctacgaacag aattagaacc gtcgaaccga
      841 cataagaacc ttgctttatc tgctcaaaat tggaacattc cggataagac aacgtaaccg
      901 gctttccgtt caaaatccat ttatcgccca ccctttccgg cctgatgatt tttccttctt
      961 ctgtaacagt aggaggaaga gacgacaata aatagtcgtc tgcctgcaat cttgtatcaa
     1021 aacagttcat gccgacacga taacccattc acgcgcccct ctttcttcac tgccgttatt
     1081 tgacagattt aatcatgctc caagccattt tgaagccttg gattgccaaa atgacggtaa
     1141 tggccgccat acccacggcg gaaaccatcg caacgaaacc catgattaca ttcgccactt
     1201 gcgtaccaat cgcggctgca tcaaagccat ctgccataac aatagccggt gtgaagatac
     1261 cagctgccaa caatgctttt acagcatatt ttttaacgat gttcatcgtt tttttccttt
     1321 ttttgatatt taaaataaga cgacttcttg acttgcttca tccggacgaa gtcttttccg
     1381 aatctcgttt ttagccgata aaatagagga ttgcgaaaag aaaaagaaac atacagacca
     1441 cccagccgat aattagtgtt gcaaggttca ttttcatgat atttttcctt tgttgcgggc
     1501 tttgtgaaag gttaacagac cgcccgccga gcctgttttt cttttattcc gattttacga
     1561 agaactgaaa tatctggaat cctccgccca tttcatttat gcctgaattc aatgcatctt
     1621 cgtaactttc aaattgacct gctgatttaa tattttgagt aaaccccaca tcaccgaacg
     1681 gatcgggata aataaagtca tgcgtttcta aatcttgaac tatgaaacgt tcttcaaatt
     1741 tcataaatca acctttcggc ttttccgcca cctgaaaatc aattaatgaa ggaaccatgc
     1801 ctttaccagt cgaagtcatt tcaaccgtta ccataacttc gcacggatat ttgagattct
     1861 ctaaccttga gaaattctta ctatccccga acttcatttg tgctgccgta aatccaacag
     1921 cattacccga ctgtgccggt aaaggtgttg caaccaatac ggaacaagtg tcaatgttag
     1981 agccatcaat ttcacctttg aattttttgg ctcccaaaaa agtcgcagga taagttacag
     2041 tttggttttg attaaacatt ttgatttcct ttaaaaataa tcataattta cattttgatg
     2101 ataaacttca tctagataat cctgatattt cctttctttc tcggcatcat aatcaggact
     2161 aaaaagcctt ttttccctat cgaatttgtc agaattttta aaagcaataa cccccaattc
     2221 atcaagttca atttccaaat caatatccgg ctgttcatga ataaaaccgt gtttcaaacc
     2281 gtcccttaac atttccagag catatttttc aggttctaat cctttgggaa atcccgaatc
     2341 tgcctttaaa gattccacaa tttcgctatt atcaaaaccc atttcaatca tgaaattgac
     2401 cagttttcca accgcgtttt tcgcgtaatg caatttatgc tcgaaagtta aattaagcgt
     2461 tttctttctc tgatcaaacc tttcgggaac cggcatattt ttaaattttc tacaaattgg
     2521 aaaagctcca cagaaatacg aaccctgatt tattaaaata tccaagggta tttctatatc
     2581 tccataatta aactggatct cgaaccttac ccatttgctt tctttatctc caagctgcct
     2641 gcctttctca taaacacgaa caaaacgaga atttttcttg cgacctacat aaaatgtctt
     2701 gccgctcccg tcctcattcc gccaagccgt accgatcgtt tcagatttcg gcctttgatt
     2761 gctgttatca aaaaaaccat tatcgtgatc taacaacgcc tgatccggcg tgtactctcc
     2821 atcaaaaaaa tcaagtgcta ggtcaattcg cgttattctt gtccttatcg aatcatcgag
     2881 aaactgcttt agcctcaact cccaacccgg acttgcaacg ctgcaaccag tacctttcaa
     2941 ctcaactaaa acagtattgc gctgacctcc gaaatgcacc tctccataat caacatcatc
     3001 cgaacctaac ctatacatgg attcatagaa tttgttgccc cttgatttgc atttgcgcgt
     3061 tatgccaaaa cctagaattt cttccagctt tctgcttaat acatacatgt attcagcatc
     3121 agaaaataaa gggcaaccgg aaactttcag taaagtatct tcatggaatg tgaatgaaat
     3181 ccaatcaaca aaaaccccgt cttgcttacc tcttcgctgc ggaatttcta aaagcttccc
     3241 ttttccgtcc gatataaagt gtgagaaata ttcaacttca ctcattcgtt cactactctt
     3301 ggaattggtt tttaatttcg ctccccccct gttagtcaag ggggggcttt cagccgtttc
     3361 ccgtcttccg cgctaaagcg cgtacgacgg tcaacgaccg aaagccaaat cctgacaaac
     3421 ttttaaagat caacaaaaaa gaccacaacc atccgttgtg ataatcactg gaaaattcga
     3481 accaaccgaa tctatataat cgaacgcctg ataaagcttt gaaaaattct cttgattaat
     3541 gagtttatgc ggttcgccat gtctgaactg ataaaaacac aaaacacaag aatctgattt
     3601 tttaaatatt ctccaataag aacaggaaaa tattacattt actgctgaca taaaaaagcc
     3661 cctttcactt ggctgtcaaa ggggaatgtt aagaaaatta atgcgcccct ttgatagagc
     3721 gcatcatat
//
LOCUS       DAWGKF010000181         3727 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.181, whole genome shotgun sequence.
ACCESSION   DAWGKF010000181 DAWGKF010000000
VERSION     DAWGKF010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3727)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3727)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3727
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.181"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..139
                     /locus_tag="WHR07_001882"
     CDS             <1..139
                     /locus_tag="WHR07_001882"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HEZ2131053.1"
                     /translation="LQVRIGQRFYRTTARAVIGSGGTAEIPAIADEPGAAANVATARR
                     N"
     gene            139..750
                     /locus_tag="WHR07_001883"
     CDS             139..750
                     /locus_tag="WHR07_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HEZ2131054.1"
                     /translation="MAAPAGVATECRLTVQGGTDRESDASLLARLLKIIRRPPAGGNR
                     YDYKNWALSVDGVTSAYVYPLRRGLGTVDIAITSADGVPSEETVRRVQAYIDEMRPVT
                     AKNALVLKPTVTAVPVTVQVKLDGIDLDEAKRRIRTALKEYFDTLIPGDGLTVSQIEA
                     AISNVDGVIDRRLTAPTANRAADTVNRIEWFKAGAINVTEMPS"
     gene            747..1307
                     /locus_tag="WHR07_001884"
     CDS             747..1307
                     /locus_tag="WHR07_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmfQ family protein"
                     /protein_id="HEZ2131055.1"
                     /translation="MSYQDILRGLLPPVSYARNAPRVRAQAEIDGAALDAVAESAQSV
                     ADAVDPRSAGQMLADWERVLGLDGTGKNRQRRVLAVMAKLNETGGLSIPYFVRLAEAA
                     GYQIQIDEPQPFRAGVNRAGDRLAPQEIMWVWHVNVRGGNNRITRFRAGISAAGDRLT
                     DYSDAVIESLFNRLKPAHTAIRFTYR"
     gene            1318..3291
                     /locus_tag="WHR07_001885"
     CDS             1318..3291
                     /locus_tag="WHR07_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HEZ2131056.1"
                     /translation="MHPIETPDKTFHDGDGVSELGTILPAWWLNQVQSELLAVLTAAG
                     IQPDKSQPNQLLAALNRLAVVTTGNQEIGGQKTFTAQTQFQSGIHLSANQTNWNGGHK
                     AYIGADADNAHIVFGDDTLRLHGANNRISYNNHDIFHKANKPRFAEDIEGKPNTLSGY
                     GIGNFKVETFRGDLNTLKTDGIYSLSTAVGSSNLPVENTACHIQVIAGTKHGWCRQLG
                     YPAYTSDVYERHQTSSANDNWSAWKKLNSDGIPVGAIVSFPKAVRNPAGYLKANGTTF
                     AQNTFPDLYRALGNSNRLPDLSRTDIGMTAWFPSDQIPTDWLAFDDIRTRVTETAYPE
                     LYRLLTGKYGSIQNVPQAEDRFIRNAGNSLAVGTKQEDEIKRHVHKVFSHWTNHTDTA
                     AVGYEDHNERQRSALVSTWTDGDLNDNGFLTPRPDSKMATGGDENRPKALVLKLCIKA
                     ADTLGEAVFWIKSHGETINAGALDAGTLAQNLQDKADRAHTHTAAQIQGLDEKISTAV
                     AAQFTRQTIGGVDIVRFPDGTMIQTGSYRFTRSGGPIENEVVFPVAFADGNVKCFVSE
                     RHSGRVTGDRRQHNWLFIRAKNHAAAIITNWYEGSCDWMAIGKAASGNAASSPIGPEI
                     PETNEEPQRESGRTSTGPRNRRRRDGLLEALQD"
BASE COUNT          911 a         1174 c         1039 g          603 t
ORIGIN      
        1 cctgcaagtg cgtatcggcc agcgttttta ccgcactacc gcccgcgccg ttatcggcag
       61 cggcggcacg gcggaaatac cggcaatcgc cgacgagccg ggcgcggccg ccaatgtggc
      121 gacggcgagg cgcaactgat ggccgccccc gccggtgtgg ccaccgaatg ccgccttacc
      181 gtacaaggcg gcaccgaccg agaaagcgat gcctcactgc tggcgcgtct gttgaaaatc
      241 atccgccgac cgcccgcagg cggcaaccgt tacgactata aaaactgggc gttgagtgtt
      301 gacggcgtaa ccagcgcata tgtttatccg ctgcgccgcg gcttgggtac ggtggatatt
      361 gccattacct ccgccgacgg tgtgccatcg gaagaaactg tgcgccgcgt acaggcttat
      421 atcgacgaga tgcgcccggt aacggcaaaa aatgcgctgg tactcaagcc aaccgtaacg
      481 gcggtgcctg ttaccgtgca agtcaagctc gacggcatcg acttggacga ggccaagcgc
      541 cgcatacgga cggccctaaa agaatatttc gacaccctga tccccggcga cggcctgact
      601 gtgtcgcaaa tcgaggcggc tatcagcaat gtggatggtg tgatcgaccg ccgtctgact
      661 gcgccgacgg ccaaccgtgc cgccgatacg gttaaccgca tcgagtggtt taaagcgggc
      721 gcgattaatg taacggagat gccgtcatga gctatcaaga catcttgcgg ggtctgttgc
      781 cccccgtgtc gtatgcccgc aatgccccgc gtgtgcgggc gcaggcagaa atagacggcg
      841 cagcgctgga tgcggtagcg gaatcggctc aaagcgttgc cgatgccgtc gacccgcgca
      901 gcgccggcca aatgctggcc gattgggagc gcgtattagg tttggacggt acgggcaaaa
      961 accgccagcg ccgtgtgttg gccgtcatgg ccaagctaaa cgaaacaggc ggcttgagta
     1021 ttccttattt tgtgcgtttg gccgaggcgg cgggctatca aatccaaatc gacgaaccgc
     1081 agccgttccg cgccggtgtc aaccgtgcgg gcgaccgtct tgcgccgcag gaaatcatgt
     1141 gggtgtggca cgttaacgtg cgcggcggca acaaccgcat tacccgattc cgcgccggta
     1201 tctcggcggc gggcgacagg ctgaccgatt acagcgatgc cgtgatcgaa agcctgttca
     1261 accgcctcaa gcccgcccac accgctatcc gatttaccta ccgataagga ctaaaccatg
     1321 caccccatcg aaacccccga taagaccttc cacgacggcg acggcgtgtc cgaattgggc
     1381 accatcctgc ccgcgtggtg gctcaaccaa gtgcaatccg agctgctggc cgtgctgact
     1441 gcggccggta tccagccgga taagtcgcag cctaatcaat tactggcagc actgaataga
     1501 ctggctgtag ttaccaccgg caaccaagaa atcggcggcc aaaaaacctt taccgcccaa
     1561 acccaattcc aaagcggcat ccatttatcc gccaaccaga cgaactggaa cggcggccac
     1621 aaagcctaca tcggcgcgga tgccgacaac gcccacatcg tcttcggcga cgacaccctg
     1681 cgcctgcacg gcgcaaacaa ccgcatttcc tacaacaacc acgacatctt ccacaaagcc
     1741 aacaaaccgc gttttgccga agacatcgaa ggcaaaccga acacactgtc cggatacggc
     1801 atcggcaatt tcaaagtcga aaccttccgg ggcgatttga acaccctcaa aacagacggc
     1861 atctattccc tgtcgacggc ggtcggcagc tccaacctgc ccgttgaaaa caccgcctgc
     1921 catatccaag tcatcgccgg cacgaaacac ggctggtgca ggcagttggg ttatcccgcc
     1981 tacacgtccg acgtgtacga acgccaccaa acgagcagcg caaacgacaa ctggtccgca
     2041 tggaaaaaac tcaattcgga cggcatcccc gtcggcgcga tcgtatcctt tcccaaagcc
     2101 gtccgaaacc ccgcaggcta tctcaaagcc aacggcacga cctttgcaca aaacaccttc
     2161 cccgacctct accgcgcctt gggcaacagc aaccgcctgc ccgatttaag ccgtaccgac
     2221 atcggcatga ccgcgtggtt tccgtccgac caaatcccga ccgactggct ggcgtttgac
     2281 gacatccgca cgcgcgtaac cgaaaccgct tatcccgagc tgtaccgtct gctgaccgga
     2341 aaatacggca gcatccaaaa cgtcccgcag gcggaagacc gctttatccg caacgcaggc
     2401 aacagcttgg cagtcggaac gaagcaggaa gacgaaatca aacggcacgt ccacaaagta
     2461 ttttcacact ggacaaacca cacagacacg gcagccgtcg gttacgaaga ccacaacgaa
     2521 aggcagagaa gcgcgctcgt atcgacttgg acggacggcg atttaaacga caacggcttt
     2581 ttaaccccgc gcccggacag caaaatggcg acaggcggcg acgaaaaccg ccccaaagcc
     2641 ctggttttaa aactgtgcat caaagccgcc gacaccttgg gcgaagccgt gttttggata
     2701 aagtcccacg gcgaaaccat caacgccggc gcgctggacg cgggcacgct ggcgcaaaac
     2761 ctccaagaca aagcagaccg cgcccacacc cacaccgccg cccaaatcca agggctggac
     2821 gaaaaaatca gcaccgccgt tgccgcgcaa ttcacacgcc aaaccatcgg cggcgtggat
     2881 attgtcagat tccccgacgg cacaatgata cagaccggca gctacaggtt cacacgaagc
     2941 ggcggcccca tcgaaaacga agtcgtcttc cccgtcgcct ttgccgacgg caacgtcaaa
     3001 tgcttcgtat ccgaacgcca ttcgggacgc gttaccggcg atcgaaggca acacaactgg
     3061 ctgtttatcc gcgcaaaaaa ccacgccgcc gccattatta ccaactggta cgaaggcagt
     3121 tgcgactgga tggccatcgg caaagccgcc tcgggaaacg ccgccagctc cccgataggc
     3181 cccgaaatac ctgaaaccaa cgaagaaccg caaagagaga gtggaagaac atcaaccgga
     3241 ccccgaaacc gccgccgccg agacggcttg ctcgaggcac tgcaagacta gcgggctgta
     3301 gagatggctg tagagacggg ctgtagagat ggctgtagag atggctgtag agatggctgt
     3361 agagacgggc tgtagagatg gctgtagaga cgggctgtag agatggctgt agagatggct
     3421 gtagagacgg gctgtagaga tggctgtaga gacgggctgt agagacgggc tgtagagatg
     3481 gctgtagaga cgggctgtag agacgggctg tagagatggg ctgtagagat gggctgtaga
     3541 gatgggcttc agcccgccga tccaagcaat ccgaccgaaa ccggccgcgc cgccaatccc
     3601 ccgaaaccta tgccccgcca atcctgccac tcttcgtcat tcccgccgct ttcgtcattc
     3661 ccgcgaaagc gggaatccag cccctaaacg cggcaggaat ctatcggaaa aaacagaaac
     3721 ccccgcc
//
LOCUS       DAWGKF010000182         3609 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.182, whole genome shotgun sequence.
ACCESSION   DAWGKF010000182 DAWGKF010000000
VERSION     DAWGKF010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3609)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3609)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3609
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.182"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            275..3481
                     /gene="nalP"
                     /locus_tag="WHR07_001886"
     CDS             275..3481
                     /gene="nalP"
                     /locus_tag="WHR07_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endopeptidase autotransporter NalP"
                     /protein_id="HEZ2131057.1"
                     /translation="MRTTPTFPTKTFKPAAMALAVATTLSACLGGGGGGTSAPDFNAG
                     GTGIGSNSRATTAKSAAVSYAGIKNEMCKDRSMLCAGRDDVAVTDRDAKINAPPPNLH
                     TGDFTNPNDAYKNLINLKPAIEAGYTGRGVEVGIVDTGESVGSISFPELYGRKEHGYN
                     ENYKNYTAYMRKEAPEDGGGKDIEASFDDEAVIETEAKPTDIRHVKEIGHIDVVSHII
                     GGRSVDGRPAGGIAPDATLHIMNTHDGTKNEIMSAAIRNAWVKLGERGVRIVNNSFGT
                     TSRAGTADHFQIANSEEQYRQALLAYSGGDKTDEGIRLMQQSDYGNLSYHIRNKNMLF
                     IFSASNDAQAQPNTLTLLPFYEKDAQKGIITVAGVDRSGEKFNGSNHCGITAMWCLSA
                     SYEASVRFTRTNPIQIAGTSFSAPIVTGTAALLLQKYPWMSNDNLRTTLLTTAQDIGA
                     VGVDSKFGWGLLDAGKAMNGPASFPFGDFTADTKGTSDIAYSFRNDISGTGGLIKKGG
                     SQLQLHGNNTYTGKTIIEGGSLVLYGNNKSDMRVETKGALIYNGAASGGSLNSDGIVY
                     LADTDRSGANETVHIKGDLQLGGEGTLYTRLGKLLKVDGTAMTGGKLYMSAGGKGAGY
                     LNRTGQRVPFLSAAKIGRDYSFFTNIETDGGLLASLDSVEKTAGSEGDTLSYYVRRGN
                     AARTASAAAHSAPAGLKHAVEQGGSNLENLMVELDASESSATPETVETAAADRTDMPG
                     IRPYGATFRAAAAVQHANAADGVRIFNSLAATVYADSTAAHADMQGRRLKAVSDGLDH
                     NATGLRVIAQTQQDGGTWEQGGVEGKMRGSTQTVGIAAKTGENTTAAATLGMGHSTWS
                     ENSANAKTDSISLFAGIRHDAGDIGYLKGLFSYGRYKNSISRSTGADEHAEGSVNGTL
                     MQLGALGGVNVPFAATGDLTVEGGLRYDLLKQDAFAEKGSALGWSGNSITEGTLVGLA
                     GLKLSQPLSDKAVLFATAGVERDLNGRDYTVTGGFTGATAATGKTGARNMPHTRLVAG
                     LGADVEFGNGWNGLARYSYAGSKQYGNHSGRVGVGYRF"
BASE COUNT          972 a          988 c          965 g          684 t
ORIGIN      
        1 atccactata actagggaaa ttcaaattaa gttagaatta tccctatgag aaaaagccgt
       61 ctaagccggt ataaacaaaa taaactcatt gagctatttg tcgaaagttc aaatttccat
      121 tttaaaacaa ttagtaaaat cgagtttatc ctagttgtcc aagacaaccc ctataataat
      181 ataattcaaa atataaaaac gggttacatc taaacattac ggaattttta ttccctcgcc
      241 tgaattctat tgtcagattc aaggagacct catcatgcga acgaccccaa ccttccctac
      301 aaaaactttc aaaccggctg ccatggcgtt agctgttgca acaacacttt ctgcctgctt
      361 aggcggcggc ggaggcggca cttctgcgcc cgacttcaat gcaggcggta ccggtatcgg
      421 cagcaacagc agggcaacaa cagcgaaatc agcagcagta tcttacgccg gtatcaagaa
      481 cgaaatgtgc aaagacagaa gcatgctctg tgccggtcgg gatgacgttg cggttacaga
      541 cagggatgcc aaaatcaatg ctcccccccc gaatctgcat accggagact ttacaaaccc
      601 aaatgacgca tacaagaatt tgatcaacct caaacctgca attgaagcag gctatacagg
      661 acgcggggta gaggtaggta tcgtcgacac aggcgaatcc gtcggcagca tatcctttcc
      721 cgaactgtat ggcagaaaag aacacggcta taacgaaaat tacaaaaact atacggcgta
      781 tatgcggaag gaagcgcctg aagacggagg cggtaaagac attgaagctt ctttcgacga
      841 tgaggccgtt atagagactg aagcaaagcc gacggatatc cgccacgtaa aagaaatcgg
      901 acacatcgat gtggtctccc atattattgg cgggcgttcc gtggacggca gacctgcagg
      961 cggtattgcg cccgatgcga cgctacacat aatgaatacg catgatggaa ccaagaacga
     1021 aataatgtct gcagccatcc gcaatgcatg ggtcaagctg ggcgaacgtg gcgtgcgcat
     1081 cgtcaataac agttttggaa caacatcgag ggcaggcact gccgaccatt tccaaatagc
     1141 caattcggag gagcagtacc gccaagcgtt gctcgcctat tccggcggtg ataaaacaga
     1201 cgagggtatc cgcctgatgc aacagagcga ttacggcaac ttgtcctacc acatccgtaa
     1261 taaaaacatg cttttcattt tttcggcaag caatgacgca caagctcagc ccaacacact
     1321 gaccctattg ccattttatg aaaaagacgc tcaaaaaggc attatcacag ttgcaggcgt
     1381 agaccgcagt ggagaaaagt tcaatggctc caaccattgc ggaattactg ccatgtggtg
     1441 cctatcggca tcctatgaag caagcgtccg tttcacccgt acaaacccga ttcaaattgc
     1501 cggaacatcc ttttccgcac ccatcgtaac cggcacggcg gctctgctgc tgcagaaata
     1561 cccgtggatg agcaacgaca acctgcgtac cacgctgctg acaacggctc aggacatcgg
     1621 tgcagtcggc gtggacagca agttcggctg gggactgctg gatgcgggta aggccatgaa
     1681 cggacccgcg tcctttccgt tcggcgactt taccgccgat acgaaaggta catccgatat
     1741 tgcctactcc ttccgtaacg acatttcagg cacgggcggc ctgatcaaaa aaggcggcag
     1801 ccaactgcaa ctgcacggca acaacaccta tacgggcaaa accattatcg aaggcggttc
     1861 gctggtgttg tacggcaaca acaaatcgga tatgcgcgtc gaaaccaaag gtgcgctgat
     1921 ttataacggg gcggcatccg gcggcagcct gaacagcgac ggcattgtct atctggcaga
     1981 taccgaccga tccggcgcaa acgaaaccgt gcacatcaaa ggcgatctgc agctgggcgg
     2041 cgaaggtacg ctgtacacac gtttgggcaa actgctgaaa gtggacggta cggcgatgac
     2101 cggcggcaag ctgtacatgt cggcaggcgg taagggggca ggctatctca accgtaccgg
     2161 acaacgtgtt cccttcctga gtgccgccaa aatcgggcgg gattattctt tcttcacaaa
     2221 catcgaaacc gacggcggtc tgctggcttc cctcgacagc gtcgaaaaaa cagcgggcag
     2281 tgaaggcgac acgctgtcct attatgtccg tcgcggcaat gcggcacgga ctgcttcggc
     2341 agcggcacat tccgcgcccg ccggtctgaa acacgccgta gaacagggcg gcagcaatct
     2401 ggaaaacctg atggtcgaac tggatgcctc cgaatcatcc gcaacacccg agacggttga
     2461 aactgcggcc gccgaccgca cagatatgcc gggcatccgc ccctacggcg caactttccg
     2521 cgcagcggca gccgtacagc atgcgaatgc cgccgacggt gtacgcatct tcaacagtct
     2581 cgccgctacc gtctatgccg acagtaccgc cgcccatgcc gatatgcagg gacgccggct
     2641 gaaagccgta tcggacgggt tggaccacaa cgctacgggt ctgcgcgtca tcgcgcaaac
     2701 ccaacaggac ggtggaacgt gggaacaggg cggtgttgaa ggcaaaatgc gcggcagtac
     2761 ccaaaccgtc ggcattgccg cgaaaaccgg cgaaaatacg acagcagccg ccacactggg
     2821 catgggacac agcacatgga gcgaaaacag tgcaaatgca aaaaccgaca gcattagtct
     2881 gtttgcaggc atacggcacg atgcgggcga tatcggctat ctcaaaggcc tgttctccta
     2941 cggacgctac aaaaacagca tcagccgcag caccggtgcg gacgaacatg cggaaggcag
     3001 cgtcaacggc acgctgatgc agctgggcgc actgggcggt gtcaacgttc cgtttgccgc
     3061 aacgggagat ttgacggtcg aaggcggtct gcgctacgac ctgctcaaac aggatgcatt
     3121 cgccgaaaaa ggcagtgctt tgggctggag cggcaacagc atcactgaag gcacactggt
     3181 cggactcgcg ggtctgaagc tgtcgcaacc cttgagcgat aaagccgtcc tgtttgcaac
     3241 ggcgggcgtg gaacgcgacc tgaacggacg cgactacacg gtaacgggcg gctttaccgg
     3301 cgcgactgca gcaaccggca agacgggggc acgcaatatg ccgcacaccc gcctggttgc
     3361 cggtctgggc gcggatgtcg aattcggcaa cggctggaac ggcttggcac gttacagcta
     3421 cgccggttcc aaacagtacg gcaaccacag cggacgagtc ggcgtaggct accggttctg
     3481 acggacagga agcagacagc cgcaaagatc acggtctttg cggctgtttc ttatgaaaag
     3541 aaaaccctat tccaattgcc tgcttctatt gtttcaagac ttcttccaaa gattcggcat
     3601 caatcagat
//
LOCUS       DAWGKF010000183         3508 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.183, whole genome shotgun sequence.
ACCESSION   DAWGKF010000183 DAWGKF010000000
VERSION     DAWGKF010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3508)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3508)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3508
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.183"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            43..720
                     /locus_tag="WHR07_001887"
     CDS             43..720
                     /locus_tag="WHR07_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tfp pilus assembly protein FimT/FimU"
                     /protein_id="HEZ2131058.1"
                     /translation="MCTRKQQGFTLTELLIVMVIAAIMAMIALPNMSQWIASRRIASH
                     AERIANLLRFSRGEAVRLNLPVYICPVQVKKDGTPNNKCDSGKKGQGMLAFGDKNGNK
                     TYDGDTADVLLRSVVLNDDINNKRINYAFNHIAFGQTQPTADRVVWTFNQNGTFGYTK
                     DQHLTSKSSFFYSDGYIQIVLTDARAVSDADKKFRSAVVLINSSGRVEVCPRGDRRTR
                     RTMCQYK"
     gene            744..1358
                     /gene="pilV"
                     /locus_tag="WHR07_001888"
     CDS             744..1358
                     /gene="pilV"
                     /locus_tag="WHR07_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus modification protein PilV"
                     /protein_id="HEZ2131059.1"
                     /translation="MKNNDCFRLKDSQSGMALIEVLVAMLVLTIGILALLSVQLRTVA
                     SVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKNYNLYMGNHHTLSAVDGDFAIDA
                     MKTKTQLAEAQLKRFSYELKNALPDAAAIHYAVCKDSLGAAPTLSAGSTFSQNCDGSA
                     NGDTLIKVLWVNDSAGDSDIARTNLETNGNNIVYTYQARVGGRE"
     gene            1355..2341
                     /locus_tag="WHR07_001889"
     CDS             1355..2341
                     /locus_tag="WHR07_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilW family protein"
                     /protein_id="HEZ2131060.1"
                     /translation="MRRKMLNVPKGSYDGMKGFTIIEFLVAGLLSMIVLMAVGSSYFT
                     SRKLNDAANERLAIQQDLRNAATLIVRDARMAGGFGCFNMSEHPATDVVSDVAQKNRS
                     FFLKRNGIDKLIPIAESSNIGYPGFTQRLNALIFQYGIDDVNASADTTVVSSCAKIAK
                     PGKKISTLQEAKSALQITNDDKQNGNITRQRHVVNAYAVGRIAGEEGLFRFQLNDDGQ
                     WGNPQLLVKKINKMDIRYIYLLVEKPSTPPTNPPQYIYGCPEDEDTGKEEKFKYTDKF
                     DSSKDAVTPAGVEVLLSSGTDTKIAASSDNHIYAYRIDATIRGGNVCANRTL"
     gene            2320..2919
                     /locus_tag="WHR07_001890"
     CDS             2320..2919
                     /locus_tag="WHR07_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein"
                     /protein_id="HEZ2131061.1"
                     /translation="MRKQNTLTGIPTSDGQRGFALFIVLMVMIVVAFLVVTAAQSYNT
                     EQRISANESDRKLALSLAEAALREGELQVLDLEYDTDSKVTFSENCEKGLCTAVNVRT
                     NTNNGNEEVFDNIVVQGKPTVEAVKRSCTVNSTNLCIDKKGMEYKKGKGSVSKPPRYI
                     IEYLGVKNGENVYRVTAKAWGKNANTVVVLQSYVSNNDE"
     gene            2924..3397
                     /locus_tag="WHR07_001891"
     CDS             2924..3397
                     /locus_tag="WHR07_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEZ2131062.1"
                     /translation="MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTE
                     MVGINNTVKQIILKNPQDSNDILNIKLTKFVSGYKMNPKIAKKYSVSVRFVDKEKSRV
                     YSLVGVPKAGTGYTLSVWMNSVGDGYKCRDAASARAYSETLSADAGCEAFSNRKK"
BASE COUNT         1014 a          700 c          878 g          916 t
ORIGIN      
        1 aatttaatcc actatacatt accagttaac gttctattgc ttatgtgtac acgaaaacaa
       61 caaggtttca cgctaacaga gctgctcatc gtgatggtca ttgcagccat tatggcgatg
      121 atagccctcc ccaatatgag ccaatggatt gcatcccgcc gcattgccag tcacgcggag
      181 cggattgcca accttttgcg tttctccagg ggcgaagccg tccggctcaa tctccctgtc
      241 tatatctgtc ctgttcaagt taaaaaagac ggtacgccca acaataaatg tgactccggc
      301 aagaaggggc agggaatgtt ggcttttggc gataagaatg gcaataagac atatgacggc
      361 gatacggcgg atgttcttct ccgcagtgtg gtattgaatg atgatatcaa taataagcgg
      421 attaattatg ccttcaacca tatcgctttc ggtcagactc agccgaccgc tgaccgtgta
      481 gtttggacat tcaatcaaaa cgggacgttc ggttatacga aagaccagca tcttacaagc
      541 aaatccagct ttttttattc cgacggttat atccaaatcg tgctgacaga tgcgagagca
      601 gtttcagatg ccgataagaa attccgttcg gcggtggttt tgattaacag cagcggcagg
      661 gtcgaagttt gccctagggg tgatcggcgt actcggcgta ctatgtgcca gtataaataa
      721 cagtttcagt tttaaaaatg aatatgaaga ataatgattg cttccgcctg aaagattccc
      781 agtccggtat ggcgctgata gaagtcttgg tcgctatgct cgttctgacc atcggtattt
      841 tggcactatt gtctgttcag ttgcggacag tcgcttccgt cagggaggca gagacgcaaa
      901 ccatcgtcag ccaaatcacg caaaacctga tggagggaat gttgatgaat ccgaccattg
      961 attcggacag caacaagaaa aactataatc tttacatggg aaaccatcat acactatcag
     1021 ctgtggatgg cgattttgcg attgatgcca tgaaaactaa gacgcagttg gcagaggcac
     1081 aattgaagag atttagttat gagctgaaaa atgccttgcc ggatgcggca gccatccatt
     1141 acgccgtctg caaggattcg ttgggtgctg cgccgacatt gtccgccggc agtacttttt
     1201 ctcaaaattg cgatggtagt gcaaatgggg atactttgat taaagtattg tgggtaaatg
     1261 attcggcagg ggattcggat atcgcccgta cgaatcttga gacgaacggc aacaatatcg
     1321 tatataccta tcaggcaagg gttggaggtc gggaatgaga cgtaaaatgc taaacgtacc
     1381 aaaaggcagt tatgatggta tgaagggttt taccattatt gaatttttgg ttgcgggcct
     1441 gctcagtatg attgtcctga tggcggtcgg atcgagttac ttcacatccc ggaaattaaa
     1501 tgatgcggca aacgagcgtc ttgctattca acaggatttg cggaatgcgg caacattaat
     1561 tgtccgcgat gcaagaatgg cagggggctt cggttgtttc aatatgtccg agcatcctgc
     1621 aactgatgtt gtttccgatg tggcgcaaaa aaaccgttct tttttcttaa aaaggaacgg
     1681 tatagataaa cttattccca tagcggaatc ttcaaatatc ggatatccgg gttttaccca
     1741 gcgccttaac gcattgattt tccaatacgg aatcgatgat gttaatgcaa gcgccgatac
     1801 taccgtcgtc agcagctgtg ccaaaatagc aaaaccgggt aagaaaatat ctaccttgca
     1861 agaagcaaag agtgcattac agattactaa tgatgataaa caaaatggaa atatcacccg
     1921 tcaaaggcat gtggtcaatg cctatgcggt cggcaggatt gccggtgagg aaggtttgtt
     1981 ccgcttccaa ttgaatgatg atgggcagtg gggcaatcct cagttgttgg ttaaaaagat
     2041 taataaaatg gatatacggt atatctatct tctcgtggag aagcccagta caccgcctac
     2101 caatcctccc caatatattt acggctgccc tgaagatgaa gataccggca aagaggaaaa
     2161 attcaaatat acggataaat tcgacagctc caaagatgct gttacgcccg ccggggtgga
     2221 ggttttattg agtagcggta ctgataccaa gattgccgct tcttcagaca atcatattta
     2281 tgcttaccgt atcgatgcga caatacgcgg gggaaatgta tgcgcaaaca gaacactttg
     2341 acgggaatcc cgacttctga cggacagagg gggtttgcac tgtttatcgt gctgatggtg
     2401 atgatcgtcg tggctttttt ggttgtaact gccgcgcagt cttacaatac cgagcagcgg
     2461 atcagtgcca acgaatcaga caggaaattg gctttgtctt tggccgaggc ggctttgcgg
     2521 gaaggcgaac ttcaggtttt ggatttggaa tatgatacgg acagtaaggt tacatttagc
     2581 gaaaactgtg aaaaaggtct gtgtaccgca gtgaatgtgc ggacaaatac aaataatggt
     2641 aatgaagagg tttttgacaa tatcgtggtg caaggcaagc ccaccgttga ggcggtgaag
     2701 cgttcttgca ctgtaaattc taccaacctg tgcattgaca agaaagggat ggaatataag
     2761 aaaggcaagg gaagcgtcag caaaccacca cgctatatta tcgaatattt gggcgtgaag
     2821 aacggagaaa atgtttatcg ggttactgcc aaggcttggg gtaagaatgc caataccgtg
     2881 gtcgtccttc aatcttatgt aagcaataat gatgagtaat aaaatggaac aaaaagggtt
     2941 tacattgatt gagatgatga tagtcgtcgc gatactcggc atcatcagcg tcattgccat
     3001 accttcttat caaagttata ttgaaaaagg ctatcagtcc cagctttata cggagatggt
     3061 cggtatcaac aatactgtca aacagattat tttgaaaaat ccacaggata gtaatgatat
     3121 cctcaatata aaactgacaa agtttgtctc aggctataag atgaatccga aaattgccaa
     3181 aaaatatagt gtttcggtaa ggtttgtcga taaggaaaaa tcaagggtat acagcttggt
     3241 cggcgttccg aaggcgggga cgggttatac tttgtcggta tggatgaaca gcgtgggcga
     3301 cggatacaaa tgccgtgatg ccgcttctgc ccgagcctat tcggagactt tatccgcaga
     3361 tgccggctgc gaagctttct ctaatcgtaa aaaatagggc tgttttgcca atgccgtctg
     3421 aagattaatt ttcagacggc atttttatgg gtatagtgga ttaacaaaaa tcaggacaag
     3481 gcgacgaagc cgaagacagt acaaatag
//
LOCUS       DAWGKF010000184         3435 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.184, whole genome shotgun sequence.
ACCESSION   DAWGKF010000184 DAWGKF010000000
VERSION     DAWGKF010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3435)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3435)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3435
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.184"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     regulatory      64..167
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            234..1457
                     /gene="cytX"
                     /locus_tag="WHR07_001892"
     CDS             234..1457
                     /gene="cytX"
                     /locus_tag="WHR07_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003519479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydroxymethylpyrimidine transporter
                     CytX"
                     /protein_id="HEZ2131063.1"
                     /translation="MSGNASSPSSSAAIGLIWFGAAVSIAEISTGTLLAPLGWQRGLA
                     ALLLGHAVGGALFFAAAYIGALTGRSSMESVRLSFGKRGSVLFSVANMLQLAGWTAVM
                     IYAGATVSSALGKVLWDGESFVWWALANGALIVLWLVFGARKTGGLKTVSMLLMLLAV
                     LWLSAEVFSTAGSTAAQVSDGMSFGTAVELSAVMPLSWLPLAADYTRQARRPFAATLT
                     ATLAYTLTGCWMYALGLAAALFTGETDVAKILLGAGLGAAGILAVVLSTVTTTFLDAY
                     SAGVSANNISAKLSETPIAVAVAVVGTLLAVLLPVTEYENFLLLIGSVFAPMAAVLIA
                     DFFVLKRREEIEGFDFAGLVLWLAGFILYRFLLSSGWESSIGLTAPVMSAVAIATVSV
                     RLFFKKTQSLQRNPS"
     gene            1454..2554
                     /locus_tag="WHR07_001893"
     CDS             1454..2554
                     /locus_tag="WHR07_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEZ2131064.1"
                     /translation="MTRIAILGGGLSGRLTALQLAEQGYQIALFDKGCRRGEHAAAYV
                     AAAMLAPAAEAVEATPEVVRLGRQSIPLWRGIRCRLNTHTMMQENGSLIVWHGQDKPL
                     SSEFVRHLKRGGVADDEIVRWRADDIAEREPQLGGRFSDGIYLPTEGQLDGRQILSAL
                     ADALDELNVPCHWEHECAPEDLQAQYDWLIDCRGYGAKTAWNASAEHGSTLRGIRGEV
                     ARVYTPEITLNRPVRLLHPRYPLYIAPKENHVFVVGATQIESESQAPASVRSGLELLS
                     ALYAVHPAFGEADILEIATGLRPTLNHHNPEIRYSLARRLIEINGLFRHGFMISPAVT
                     AAAVRLAVALVDGKDAPERDEESGLAYIRRQD"
     gene            2575..3192
                     /gene="thiE"
                     /locus_tag="WHR07_001894"
     CDS             2575..3192
                     /gene="thiE"
                     /locus_tag="WHR07_001894"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEZ2131065.1"
                     /translation="MTFPPLKSPLKFYAVVPTADWVGRMVKAGADTVQLRCKTLHGDE
                     LKREIARCVAACQGSRTQLFINDHWREAIEAGAYGVHLGQEDMDTADLAAIAAAGLRL
                     GLSTHSVAELDRALSVHPSYVASGAIFPTTTKQMPTAPQGLDKLCEYVKQAGGTPVVA
                     IGGIDLNNARAVLATGVSSLAAVRAVTEAENPEAVVKAFQALWDG"
BASE COUNT          691 a         1074 c          951 g          719 t
ORIGIN      
        1 atgcgccgtg ccgcctgaaa tgtaagattt ttgccaacgc cccctgcttt tgtgtacact
       61 taaagctcct tgtcggagtg ccgccgccgg gcggctgaga ttgcgaaagc agaatccgta
      121 gaacctgtcg gggtaatgcc tgcgtaggaa acaaaccgtc aaatgcctta tcaggcttcc
      181 gttccctttt ccgcacttcc ccgcccacct tccttctttt taaaggacgt catatgtcgg
      241 gcaatgcctc ctctccttca tcttccgccg ccatcgggct gatttggttc ggcgcggcgg
      301 tctcgattgc cgaaatcagc acgggtacgc tgcttgcgcc tttgggctgg caacgcggtc
      361 tggcggctct acttttgggt catgccgtcg gcggcgcgct gttttttgcg gcggcgtata
      421 tcggcgcact gaccggacgc agctcgatgg aaagcgtgcg cctgtcgttc ggcaaacgcg
      481 gttcagtgct gttttccgtg gcgaatatgc tgcaactggc cggctggacg gcggtgatga
      541 tttacgccgg cgcaacggtc agctccgctt tgggcaaagt gttgtgggac ggcgaatctt
      601 ttgtctggtg ggcattggca aacggcgcgc tgattgtgct gtggctggtt ttcggcgcac
      661 gcaaaacagg cgggctgaaa accgtttcga tgctgctgat gctgttggcg gttctgtggc
      721 tgagtgccga agtcttttcc acggcaggca gcaccgccgc acaggtttca gacggcatga
      781 gtttcggaac ggcagtcgaa ttgtccgccg tcatgccgct ttcctggctg ccgctggccg
      841 ccgactacac acgccaagca cgccgcccgt ttgcggcaac cctgacggca acgctcgcct
      901 atacgctgac gggctgctgg atgtatgcct tgggtttggc agcggcgttg ttcaccggag
      961 aaaccgacgt ggcaaaaatc ctgctgggcg caggtttggg tgcggcaggc attttggcgg
     1021 tcgtcctgtc gaccgttacc accacttttc tcgatgccta ctccgccggc gtaagtgcca
     1081 acaatatttc cgccaaactt tcggaaacac ccatcgccgt tgccgtcgcc gttgtcggca
     1141 cactgcttgc cgtcctcctg cccgttaccg aatatgaaaa cttcctgctg cttatcggct
     1201 cggtatttgc gccgatggcg gcggttttga ttgccgactt tttcgtcttg aaacggcgtg
     1261 aggagattga aggctttgac tttgccggac tggttctgtg gctggcgggc ttcatcctct
     1321 accgcttcct gctctcgtcc ggctgggaaa gcagcatcgg tctgaccgcc cccgtaatgt
     1381 ctgccgttgc cattgccacc gtatcggtac gccttttctt taaaaaaacc caatctttac
     1441 aaaggaaccc gtcatgaccc gtatcgccat cctcggcggc ggcctctcgg gaaggctgac
     1501 cgcactgcag cttgcagaac aaggttatca gattgcactt ttcgataaag gctgccgccg
     1561 gggcgaacac gccgccgcct atgttgccgc cgccatgctc gcgcctgcgg cggaagcggt
     1621 cgaagccacg cccgaagtgg tcaggctggg caggcagagc atcccgcttt ggcgcggcat
     1681 ccgatgccgt ctgaacacgc acacgatgat gcaggaaaac ggcagcctga ttgtgtggca
     1741 cggacaggac aagccattat ccagcgagtt cgtccgccat ctcaaacgcg gcggcgtagc
     1801 ggatgacgaa atcgtccgtt ggcgcgccga cgacatcgcc gaacgcgaac cgcaactcgg
     1861 cggacgtttt tcagacggca tctacctgcc gaccgaaggc cagctcgacg ggcggcaaat
     1921 attgtctgca cttgccgacg ctttggacga actgaacgtc ccttgccatt gggaacacga
     1981 atgtgccccc gaagacctgc aagcccaata cgactggctg atcgactgcc gcggctacgg
     2041 cgcaaaaacc gcgtggaatg cttctgccga acacggcagc accctgcgcg gcatacgcgg
     2101 cgaagtggcg cgggtttaca cacccgaaat cacgctcaac cgccccgtgc gtctgctcca
     2161 tccgcgttat ccgctctaca tcgccccgaa agaaaaccac gtcttcgtcg tcggcgcgac
     2221 ccaaatcgaa agcgaaagcc aagcccctgc cagcgtgcgt tccgggctgg aactcttatc
     2281 cgcactctat gccgtccatc ctgccttcgg cgaagccgac atcctcgaaa tcgctaccgg
     2341 cctgcgcccc acgctcaacc accacaaccc cgaaatccgt tacagcctcg cccgacgcct
     2401 gattgaaatc aacggccttt tccgccacgg cttcatgatt tcccccgccg taaccgccgc
     2461 cgccgtcaga ttggcagtgg cactggttga cggaaaagac gcgcccgaac gtgatgaaga
     2521 aagcggtttg gcgtatatcc gaagacaaga ttaaagccgt ctgaaaggaa ccccatgacc
     2581 ttcccgccct tgaaatcccc gctcaaattc tacgccgtcg tccccaccgc cgattgggtg
     2641 gggcgcatgg tcaaagcagg tgccgacacg gtgcaactgc gctgcaagac cctgcacggc
     2701 gatgaattga aacgcgaaat cgcccgctgc gtcgccgcct gtcaaggcag ccgtacgcag
     2761 cttttcatca acgaccactg gcgcgaggca atcgaagcag gcgcgtacgg cgtgcatctc
     2821 ggacaagaag acatggacac cgccgacctt gccgccatcg ccgccgccgg tttgcgcttg
     2881 ggtttgagta cgcactccgt tgccgaactc gaccgcgccc tgtccgtaca ccctagctac
     2941 gtcgccagcg gcgcgatttt cccgaccacg accaagcaaa tgcccaccgc cccgcaaggc
     3001 ttggacaaac tgtgcgagta tgtgaaacag gcaggcggca cgcccgtcgt cgccatcggc
     3061 ggtatcgact tgaacaacgc ccgagccgta ctcgccaccg gcgtttcctc actcgccgcc
     3121 gtccgcgccg tgaccgaagc ggaaaatccc gaagcggtgg ttaaagcgtt tcaggctttg
     3181 tgggatggat aaaaccgaaa gaagaaaatt caatttgccg tgtcggcaaa acttagcccg
     3241 ttatcgcaaa catacttaac tttaaatgtg gcatatcatc aaattccgtc atttccgcgc
     3301 aagcgggaat ccgccttaaa acttgagaaa ccatcatttg aaaaacagtt tccgaatttc
     3361 aaaaatggat tcccgcctgc gcgggaatga cggcaaccgg ccggttgcgt atcaaaaaat
     3421 aaagtaattc ggcta
//
LOCUS       DAWGKF010000185         3427 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.185, whole genome shotgun sequence.
ACCESSION   DAWGKF010000185 DAWGKF010000000
VERSION     DAWGKF010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3427)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3427)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3427
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.185"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            314..3079
                     /locus_tag="WHR07_001895"
     CDS             314..3079
                     /locus_tag="WHR07_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ2131066.1"
                     /translation="MRSSFRLKPICFYLMGVMLYHHSYAEDAGRAGSEAQIQVLEDVH
                     VKAKRVPKDKKVFTDARAVSTRQDIFKSSENLDNIVRSIPGAFTQQDKSSGIVSLNIR
                     GDSGFGRVNTMVDGITQTFYSTSTDAGRAGGSSQFGASVDSNFIARLDVVKGSFSGSA
                     GINSLAGSANLRTLGVDDVVQGNNTYGLLLKGLTGTNSTKGNAMAAIGARKWLESGAS
                     VGVLYGHSRRSVAQNYRVGGGGQHIGNFGAEYLERRKQRYFVQTGGLKFNSDSGKWER
                     DLQRQFWKTRYYKQYEDPQKLRKYIEGQDKDWRENLAPQYDITPIDPSSLKQQSAGNL
                     FKLEYDGVFNKYTAQFRDLNTKIGSRKIINRNYQFNYGLSLNSYANLNLTAAYNSGRQ
                     KYPKGSKFTGWGLLKDFETYNNAKILDLNNTATFRLPRETELQTTLGFNYFHNEYGKN
                     RFPEELGLFFDGPDQDNGLYSYLGRFKGDKGLLPQKSTIVQPAGSQYFNTFYFDAALK
                     KDIYRLNYSTNTVGYRFGGEYTGYYGSDDEFKRAFGENSPTYKKHCNQSCGIYEPVLK
                     KYGKKRANNHSVSISADFGDYFMPFASYSRTHRMPNIQEMYFSQIGDSGVHTALKPER
                     ANTWQFGFNTYKKGLLKQDDILGLKLVGYRSRIDNYIHNVYGKWWDLNGNIPSWVSST
                     GLAYTIQHRNFKDKVHKHGFELELNYDYGRFFTNLSYAYQKSTQPTNFSDASESPNNA
                     SKEDQLKQGYGLSRVSALPRDYGRLEVGTRWLGNKLTLGGAMRYFGKSIRATAEERYI
                     DGTNGGNTSNFRQLGKRSIKQTETLARQPLIFDFYAAYEPKKNLIFRAEVKNLFDRRY
                     IDPLDAGNDAATQRYYSSFDPKDKDEDVTCNADGLCNGKYGGTSKSVLTNFARGRTFL
                     MTMSYKF"
     gene            3122..3364
                     /locus_tag="WHR07_001896"
     CDS             3122..3364
                     /locus_tag="WHR07_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131067.1"
                     /translation="MPSESPSDGICFPKRIILPQAYANPFYRIGNSKKNPFHSHAGKP
                     VFDFGYFWLFRVIYESSFPQKRESRHSMLRQFIEND"
BASE COUNT          975 a          842 c          830 g          780 t
ORIGIN      
        1 gcctgcgcgg gaatgacggc tgcagatgcc cgacggtctt tatagcggat taataaaaat
       61 caggacaagg cggcgagcca cagacagtac aaacagtacg gaaccgattc acttggtgct
      121 tcagcacctt agagaatcgt tctctttgag ctaaagcgag acaacgctgt actggttttt
      181 gttaatccac tataaatatc caattgaaat cttcagacgg tatatcaaat ttacactttt
      241 ttaatgttta tgccgcctga aaaaaatgct agtatatttc ctaattgtct gactgtttat
      301 tgttgaggaa aatatgagat cttctttccg gttgaagccg atttgttttt accttatggg
      361 tgttatgcta tatcatcata gttatgccga agatgcaggg cgcgcgggca gcgaggcgca
      421 gatacaggtt ttggaagatg tgcacgtcaa ggcgaagcgc gtaccgaaag acaaaaaagt
      481 gtttaccgat gcgcgtgccg tatcgacccg tcaggatata ttcaaatcca gcgaaaacct
      541 cgacaacatc gtacgcagca tccccggtgc gtttacacag caagataaaa gctcgggcat
      601 tgtgtctttg aatattcgcg gcgacagcgg gttcgggcgg gtcaatacga tggtggacgg
      661 catcacgcag accttttatt caacttctac cgatgcgggc agggcaggcg gttcatctca
      721 attcggtgca tctgtcgaca gcaattttat tgccagactg gatgtcgtca aaggcagctt
      781 cagcggctcg gcaggcatca acagccttgc cggttcggcg aatctgcgga ctttaggcgt
      841 ggatgacgtc gttcagggca ataataccta cggcctgctg ctaaaaggtc tgaccggcac
      901 caattcaacc aaaggtaatg cgatggcggc gataggtgcg cgcaaatggc tggaaagcgg
      961 agcatctgtc ggtgtgcttt acgggcacag caggcgcagc gtggcgcaaa attaccgcgt
     1021 gggcggcggc gggcagcaca tcggaaattt tggcgcggaa tatctggaac ggcgcaagca
     1081 gcgatatttt gtacaaacag gcgggttgaa attcaattcc gacagcggaa agtgggaacg
     1141 cgatttgcaa aggcaattct ggaaaaccag gtactataaa caatacgaag acccccagaa
     1201 actgagaaaa tacatcgaag gtcaagataa agactggcgg gaaaacctgg cgccgcaata
     1261 cgacattacc cccatcgatc cgtccagcct gaagcagcag tcggcaggca atctgtttaa
     1321 attggagtac gacggcgtat tcaataaata cacggcgcaa tttcgcgatt taaacaccaa
     1381 aatcggcagc cgcaaaatca tcaaccgcaa ttatcaattc aattacggtt tatctttaaa
     1441 ctcatatgcc aacctcaatc tgaccgcagc ctacaattcg ggcaggcaga aatatccgaa
     1501 agggtcgaag tttacaggct gggggctttt aaaagatttt gaaacctaca acaacgcaaa
     1561 aatcctcgac ctcaacaaca ccgccacctt ccggctgccc cgcgaaaccg agttgcaaac
     1621 cactttgggc ttcaattatt tccacaacga atacggcaaa aaccgctttc ctgaagaatt
     1681 ggggctgttt ttcgacggtc cggatcagga caacgggctt tattcctatt tggggcggtt
     1741 taagggcgat aaagggctgc tgccccaaaa atcaaccatt gtccaaccgg ccggcagcca
     1801 atatttcaac acgttctact tcgatgccgc gctcaaaaaa gacatttacc gcttaaacta
     1861 cagcaccaat accgtcggct accgtttcgg cggcgaatat acgggctatt acggctcgga
     1921 tgacgaattt aagcgggcat tcggagaaaa ctcgccgaca tacaagaaac attgcaacca
     1981 gagctgcgga atttatgaac ccgtattgaa aaaatacggc aaaaagcgcg ccaacaacca
     2041 ttcggtcagc attagtgcgg acttcggcga ttatttcatg ccgttcgcca gctattcgcg
     2101 cacacaccgt atgcccaaca tccaagaaat gtatttttcc caaatcggcg actccggcgt
     2161 tcacaccgcc ttaaaaccag agcgcgcaaa cacttggcaa tttggcttca atacctataa
     2221 aaaaggattg ttaaaacaag atgatatatt aggattaaaa ctggtcggct accgcagccg
     2281 catcgacaac tacatccaca acgtttacgg gaaatggtgg gatttgaacg ggaatattcc
     2341 gagctgggtc agcagcaccg ggcttgccta caccatccaa caccgcaatt tcaaagacaa
     2401 agtgcacaaa cacggttttg agttggagct gaattacgat tatgggcgtt ttttcaccaa
     2461 cctttcttac gcctatcaaa aaagcacgca accgaccaac ttcagcgatg cgagcgaatc
     2521 gcccaacaat gcgtccaaag aagaccaact caaacaaggt tatgggttga gcagggtttc
     2581 cgccctgccg cgagattacg gacgtttgga agtcggtacg cgctggttgg gcaacaaact
     2641 gactttgggc ggcgcgatgc gctatttcgg caagagcatc cgcgcgacgg ctgaagaacg
     2701 ctatatcgac ggcaccaacg ggggaaatac cagcaatttc cggcaactgg gcaagcgttc
     2761 catcaaacaa accgaaactc ttgcccgcca gcctttgatt tttgattttt acgccgctta
     2821 cgagccgaag aaaaacctta ttttccgcgc cgaagtcaaa aatctgttcg acaggcgtta
     2881 tatcgatccg ctcgatgcgg gcaatgatgc ggcaacgcag cgttattaca gctcgttcga
     2941 cccgaaagac aaggacgaag acgtaacgtg taatgctgat ggcttgtgca acggcaaata
     3001 cggcggcaca agcaaaagcg tattgaccaa ttttgcacgc ggacgcacct ttttgatgac
     3061 gatgagctac aagttttaaa ggcagcccgc gttttgtgga aaaccgcaaa aaaaagccaa
     3121 aatgccgtct gaaagccctt cagacggcat ttgtttcccc aaacgcatca tcctgccgca
     3181 agcctatgcc aatccgtttt atcgcatcgg caactcaaag aaaaatccat ttcattccca
     3241 cgcagggaag ccggtttttg atttcggtta tttttggttg tttcgggtaa tttatgagtc
     3301 gtcattcccg caaaagcggg aatctagaca ttcaatgcta aggcaattta tcgaaaatga
     3361 ctgaaactca aaaaactgga ttcccacttt cgtgggaatg acgcggtgca ggtttccgta
     3421 tggatgg
//
LOCUS       DAWGKF010000186         3425 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.186, whole genome shotgun sequence.
ACCESSION   DAWGKF010000186 DAWGKF010000000
VERSION     DAWGKF010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3425)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3425)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3425
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.186"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(214..1278)
                     /locus_tag="WHR07_001897"
     CDS             complement(214..1278)
                     /locus_tag="WHR07_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEZ2131068.1"
                     /translation="MEKEFRILNIVSAKIWGGGEQYVYDVSKALGLRGCTMFTAVNKN
                     NELMHRRFSEVSSVFTTRLHTLNGLFSLCALTRFIRENRISHLMIHTGKIAALSILLK
                     KLTGVRLIFVKHNVVANKTDFYHRLIQKNTDRFICVSRLVYDVQTADNPFKEKYRIIH
                     NGIDTDRFPPSQEKPDSRFFTVAYAGRISPEKGLENLIEACVILHRKYPQIRLKLAGH
                     GHPDYMCRLKRDVSASGAEPFVSFEGFTENIASFYRQSDVVVLPSLVPEAFGLSLCEA
                     MYCRTAVISNTLGAQKEIVEHHQSGILLDRLTPESLADEIERLVLNPEAKNALATAAH
                     QCVAARFTINHTADKLLDAI"
     gene            complement(1279..2037)
                     /locus_tag="WHR07_001898"
     CDS             complement(1279..2037)
                     /locus_tag="WHR07_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEZ2131069.1"
                     /translation="MKKVSVLIVAKNEANHIRECIESCRFDKEVIVIDDHSTDNTAEI
                     AEGLGAKVFQRHLNGDFGAQKTFAIEQAGGEWVFLIDADERCTPELSDEISKIVQTGD
                     YAAYFVERRNLFPNHPATHGAMRPDSVCRLMPKKDSSVQGKVHETVQTPYPKRRLKHF
                     MYHYTYDNWEQYFNKFNKYTSISAEKYREQGKPVRFVRDIILRPIWGFFKIYILNKGF
                     LDGKMGWIMSVNHSYYTMIKYVKLYYLYKSGGKF"
     gene            complement(2112..2187)
                     /locus_tag="WHR07_001899"
     tRNA            complement(2112..2187)
                     /locus_tag="WHR07_001899"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2152..2154),aa:Ile,seq:cat)
     gene            complement(2241..3425)
                     /locus_tag="WHR07_001900"
                     /pseudo
     CDS             complement(2241..3425)
                     /locus_tag="WHR07_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247614.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
BASE COUNT          777 a          833 c          907 g          908 t
ORIGIN      
        1 tctactatac attgtaacaa agcacttgat gcggcagcac aagccgggga agacgctgca
       61 aaactttgcc aataggctgc gtaatatcgg gggatattgg gattttctta tttttaagga
      121 tggattcggg gtgtttcttt ccaatgaacg aatataattt ggcggtttgt tgcatcaaag
      181 gctttcagac ggcatatgcc gtctgaaagc agtttatatt gcatccaata atttgtcggc
      241 ggtatggttg atggtaaaac gggcggcgac gcattgatga gctgccgttg ccagtgcgtt
      301 ttttgcttcg gggtttaaga cgaggcgttc gatttcgtcc gccaaagatt caggcgtaag
      361 cctatccagc agaatccccg attgatgatg ttcgacaatt tccttttgcg cccccaaagt
      421 attggaaatc accgccgttc ggcagtacat cgcctcgcat aatgacaaac cgaatgcctc
      481 cgggacgagg ctgggcaaaa ccacgacatc gctttggcgg taaaacgaag caatgttttc
      541 ggtaaaccct tcaaaagaaa caaatggttc tgctcctgaa gcagatacgt cccgcttcag
      601 gcggcacata taatcaggat gtccgtgccc tgccaatttg agtctgattt gaggatattt
      661 ccgatgcaat atcacacagg cttcaattag gttttccaat cctttttccg gactgatcct
      721 gccggcgtag gcgacggtaa aaaaacggct gtcgggtttt tcttgagagg gagggaaccg
      781 atcggtatcg ataccgttat gaataatccg gtatttttct ttaaagggat tgtcggcggt
      841 ttgcacatcg taaaccagac gggaaacgca aataaagcgg tctgtgtttt tctgtatcag
      901 gcggtggtaa aaatcggttt tgttggcgac gacattatgt ttgacaaata tcaggcgcac
      961 cccggtcagt tttttcaaaa gtatggataa ggcggcaatt ttgccggtgt gtatcatcag
     1021 gtgggaaatg cggttttccc ggataaagcg ggtaagcgcg cagagcgaaa acagcccgtt
     1081 gagcgtgtga aggcgtgtcg tgaaaacgga agaaacttcg gaaaagcgtc tgtgcatcaa
     1141 ctcattattt ttattgacgg cggtaaacat tgtgcagccc cgaagcccca atgcttttga
     1201 aacatcatag acatattgtt cgcccccacc ccaaatcttg gccgatacga tatttaatat
     1261 cctgaattct ttttccattt aaaattttcc gccagatttg tacagataat atagtttgac
     1321 atatttaatc atcgtgtaat agctgtggtt gacggacata atccaaccca tttttccatc
     1381 aagaaaccct ttgttcagaa tataaatttt gaaaaaaccc caaatcggac ggaggataat
     1441 gtccctaacg aaacgcacgg gctttccctg ctctcggtat ttctcggctg agatggaagt
     1501 atatttgttg aacttgttga aatattgttc ccagttgtcg tacgtataat ggtacataaa
     1561 atgtttcaga cggcgtttgg ggtagggggt ttgtacggtt tcgtgtactt tgccttgcac
     1621 cgaactgtct ttcttcggca tcaaacggca tacgctgtcg ggacgcatcg cgccgtgtgt
     1681 ggcgggatgg ttggggaaaa ggttgcggcg ctcgacaaaa taggcggcat aatcgccggt
     1741 ttggacaatt tttgagattt catcagatag ttccggcgtg cagcgttcgt ctgcatcaat
     1801 caggaaaacc cattctccgc ctgcctgttc gatggcaaat gttttttgcg ctccgaaatc
     1861 cccgttcaaa tgccgttgga agacttttgc acccaaaccc tcggcaattt cggcagtatt
     1921 gtcggtgctg tggtcgtcga taacgataac ttctttatcg aaacggcaac tttcaataca
     1981 ttcccgaatg tggtttgctt cgtttttggc aacaatcaat acgctgactt ttttcattat
     2041 caaggtttct caaagcattt tggtttcaca gggcggcaaa aaagcccaaa catacgtccg
     2101 ggcttgggaa ttggtgggtc cggtggggtt cgaacccacg accaagggat tatgagtccc
     2161 ctgctctaac ccctgagcta cagacccgtc aagagtaggc gcgtattgta tagcatagcg
     2221 gtgggattga caaacttatt tcatccgatg attaagacgc agttgcttcc cccgaaggca
     2281 aacgatgagc tggcggcaat gcgtttttcg gtttcccagc ggctgccgct gccggtcagg
     2341 ttgatggcgg gcaggttggg gtcgttctgc ccgtcccaaa gccggggcgg aagttttcct
     2401 tcgggattgc tttgccggtt ggcaatgccc cacgcgaacg cggcttcgat tgcgtccgcc
     2461 gcgcccagcg tgtgtccggt ttgcggcttg gtggacgtgc agggcgtatt gttgccgaaa
     2521 accgctgcaa cggcgcggct ttccatattg tcgttgtggt gcgtcccggt gccgtgcaga
     2581 ttaatccagc cgatgtcttc gggcgcaaga cctgcgtgtt gcaatgccgt ctgaaaggca
     2641 aggattgcgc cttacgcgtc ggggcggggc gtggaaatat ggtaggcatc gctgttggct
     2701 ccgtagccga cgagttcggc gtaaattttc gcaccgcgcc gtttggcgtg ttccaattct
     2761 tccagcacga aaatccccgc gccttcgccg atgaccagcc cgtcgcggtt cgcgtcgtat
     2821 gggcgcgggg ttttttccgg ttcgccgttg cggcggctgg cggcataaag cgagtcgaaa
     2881 acatacactt cggacgggaa aaattcttcg cctccgcccg ccagcatcat atcggtcaga
     2941 ccgtatttga tggcttcgta ggcataacct atgccttggc tgccggacga acacgcgctc
     3001 gatgtcggga tgatgcgtcc tttcagcccg aaaaagatgc cgatattggc ggcggcggtg
     3061 tgcggcatca tacgcacata ggtgttggca ctgaagttgc gcgacatgcc ggtcagcaac
     3121 aattcgccta catcgccgat gtctttggtg ctgccgctgg aagagccgca ggcaacgccc
     3181 atgcgtccgt cagtaatgct ttcgtctccg agcaaaccgg catccgtcaa agcctgctcc
     3241 gccgcatcga cgcacaaata cgacacacgc cccatacttc tgagctgctt gcgcgtccaa
     3301 tgtttcggcg gcgcgtaatt ttcaatcggc gcacccagtt gcgcttccaa ttcggggaaa
     3361 cgttcgtgcc aatccactat attttcgcaa gacgcgtttt gcctgattcc aaaagttctc
     3421 aatgc
//
LOCUS       DAWGKF010000187         3347 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.187, whole genome shotgun sequence.
ACCESSION   DAWGKF010000187 DAWGKF010000000
VERSION     DAWGKF010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3347)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3347)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3347
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.187"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            60..689
                     /locus_tag="WHR07_001901"
     CDS             60..689
                     /locus_tag="WHR07_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biliverdin-producing heme oxygenase"
                     /protein_id="HEZ2131070.1"
                     /translation="MSETENQALTFAKRLKADTTAVHDSVDNLVMSVQPFVSKENYIK
                     FLKLQSVFHKAVDHIYKDAELNKAIPELEYMARYDAVTQDLKDLGEEPYKFDKELPYE
                     TGNKAIGWLYCAEGSNLGAAFLFKHAQKLDYNGEHGARHLAPHPDGRGKHWRAFVEHL
                     NALGLSPEAEAEAIQGAREAFAFYKVVLRETFGLAADAEAPEGMMPHRH"
     gene            864..3246
                     /gene="hmbR"
                     /locus_tag="WHR07_001902"
                     /pseudo
     CDS             864..3246
                     /gene="hmbR"
                     /locus_tag="WHR07_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222141.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent hemoglobin receptor HmbR"
BASE COUNT          898 a          876 c          832 g          741 t
ORIGIN      
        1 gggcaagtgc ggattttgcc cgccccgcat ccttatccct taccgacaaa ggaaaactta
       61 tgagtgaaac cgaaaatcaa gccctgacgt ttgccaaacg tctgaaggcg gataccacgg
      121 cggttcacga cagcgtggat aacctcgtta tgtctgtcca accgtttgtc agcaaagaaa
      181 actacatcaa atttttgaaa ctccaatccg ttttccacaa ggccgtcgac cacatctata
      241 aagatgccga attaaacaaa gccattcccg agctggaata catggcgcga tacgatgccg
      301 taacgcaaga cttgaaagat ttgggcgaag agccttacaa attcgacaaa gaattgccat
      361 acgaaactgg caacaaagca atcggctggc tttattgcgc cgaaggatcc aatttgggcg
      421 cggcgttttt gttcaaacac gcccaaaaac tcgattacaa cggcgaacac ggcgcgcgcc
      481 acctcgctcc gcatcccgac gggcgcggca aacactggcg cgccttcgtc gagcatctga
      541 acgcattggg cttaagcccc gaagccgaag ccgaagccat ccaaggcgcg cgcgaagcct
      601 ttgcattcta caaagtcgtg ttgcgcgaaa ccttcggctt ggcagccgat gccgaagccc
      661 ccgaaggtat gatgccgcac aggcactaaa aaataatcga accaaataaa caaggtctcg
      721 gcatagctgt ttgcagggac ctttaattac acggcgcggc tttgtttaca tggattactg
      781 tcttattaaa tattaatgat tatcataaaa tctattattc gctaaccgat ggatgaacaa
      841 tccatacatc ttgagttgat aatatgaaac cattacaaat gctccctatc gccgcgctgg
      901 tcggcagtat tttcggcaat ccggtctttg cggcagatga agctgcaact gaaaccacac
      961 ccgttaaggc agaggtaaaa gcagtgcgcg ttaaaggcca gcgcaatgcg cctgcggctg
     1021 tggaacgcgt caaccttaac cgtatcaaac aagaaatgat acgcgacaac aaagacttgg
     1081 tgcgctattc caccgatgtc ggcttgagcg acagcggccg ccatcaaaaa ggctttgctg
     1141 ttcgcggcgt ggaaggcaac cgtgtcggcg tgagcataga cggcgtaaac ctgcctgatt
     1201 ccgaagaaaa ctcgctgtac gcccgttatg gcaacttcaa cagctcgcgt ctgtctatcg
     1261 accccgaact cgtgcgcaac atcgacatcg taaaaggggc ggactctttc aataccggca
     1321 gcggcgcctt gggcggcggt gtgaattacc aaaccctgca aggacgtgac ttactgttgc
     1381 ctgaacggca gttcggcgtg atgatgaaaa acggttacag cacgcgtaac cgtgaatgga
     1441 caaataccct cggtttcggc gtgagcaacg accgcgtgga tgccgctttg ctgtattcgc
     1501 aacggcgcgg ccatgaaact gaaagcgcag gcaagcgtgg ttatccggta gagggtgctg
     1561 gtagcggagc gaatatccgt ggttctgcgc gcggtattcc tgatccgtcc caacacaaat
     1621 accacagctt cttgggtaag attgcttatc aaatcaacga caaccaccgc atcggcgcat
     1681 cgctcaacgg tcagcagggg cataattaca cggttgaaga gtcttacaac ctgcttgctt
     1741 cttattggcg tgaagctgac gatgtcaaca gacggcgtaa caccaacctc ttttacgaat
     1801 ggacgccgga atccgaccgg ttgtctatgg taaaagcgga tgtcgattat caaaaaacca
     1861 aagtatctgc ggtcaactac aaaggttcgt tcccgataga ggattcttcc accttgacac
     1921 gtaactacaa tcaaaaggac ttggatgaaa tctacaaccg cagtatggat acccgcttca
     1981 aacgcattac cctgcgtttg gacagccatc cgttgcaact cggggggggg ggggcgacac
     2041 cgcctgtcgt ttaaaacttt cgccagccgc cgtgattttg aaaacctaaa ccgcgacgat
     2101 tattacttca gcggccgtgt tgttcgaacc accagcagta tccagcatcc ggtgaaaacc
     2161 accaactacg gtttctcact gtctgaccaa attcaatgga acgacgtgtt cagtagccgc
     2221 gcaggtatcc gttacgatca taccaaaatg acgcctcagg aattgaatgc cgagtgtcat
     2281 gcttgtgaca aaacaccgcc tgcagccaac acttataaag gctggagcgg ttttgtcggc
     2341 ttggcggcgc aactgaatca ggcttggcgt gtcggttacg acattacttc cggctaccgt
     2401 gtccccaatg cgtccgaagt gtatttcact tacaaccacg gttcgggtaa ttggctgccc
     2461 aatcccaacc tgaaagccga gcgcagcacc acccacaccc tctctctgca aggccgcagc
     2521 gaaaaaggta ctttggatgc caacctgtat caaagcaatt accgcaattt cctgtctgaa
     2581 gagcagaagc tgaccaccag cggcgatgtc agctgtactc agatgaatta ctactacggt
     2641 atgtgtagca atccttattc cgaaaaactg gaatggcaga tgcaaaatat cgacaaggcc
     2701 agaatccgcg gtatcgagct gacgggccgt ctgaatgtgg acaaagtagc gtcttttgtt
     2761 cctgagggct ggaaactgtt cggctcgctg ggttatgcga aaagcaaact gtcgggcgac
     2821 aacagcctgc tgtccaccca gccgttgaaa gtgattgccg gtatcgacta tgaaagtccg
     2881 agcgaaaaat ggggcgtgtt ctcccgcctg acctatctgg gcgcgaaaaa ggtcaaagac
     2941 gcgcaataca ccgtttatga aaacaagggc tggggtacgc ctttgcagaa aaaggtaaaa
     3001 gattacccgt ggctgaacaa gtcggcttat gtgttcgata tgtacggctt ctacaaaccg
     3061 gtgaaaaacc tgactttgcg tgcaggcgta tataatgtgt tcaaccgcaa atacaccact
     3121 tgggattccc tgcgcggcct gtatagctac agcaccacca actcggtcga ccgcgatggc
     3181 aaaggcttag accgctaccg cgccccaagc cgtaattacg ccgtatcgct ggaatggaag
     3241 ttttaatctg gtattattga attaatcgcc ttgttgaaaa ttaaagccgt ccgaattgtg
     3301 ttcaagaact cattcggacg gttttttacc gtaaatctgt gtgatgg
//
LOCUS       DAWGKF010000188         3297 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.188, whole genome shotgun sequence.
ACCESSION   DAWGKF010000188 DAWGKF010000000
VERSION     DAWGKF010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3297)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3297)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3297
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.188"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(178..489)
                     /locus_tag="WHR07_001903"
     CDS             complement(178..489)
                     /locus_tag="WHR07_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HEZ2131071.1"
                     /translation="MKMHNPAHPGLVLKEYINGASITDIAKRLGVSRVALSRIVNAQS
                     SITPEMAVRLSQLLNTSPDFWLNMQAGYDLWQIRQRKTFDIAPLFPEPPLSSMQTGAR
                     A"
     gene            complement(497..775)
                     /locus_tag="WHR07_001904"
     CDS             complement(497..775)
                     /locus_tag="WHR07_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEZ2131072.1"
                     /translation="MIVSFKHKGLERFFKTGSLSGIQAGHSVKLNLLLTALNAAQTPS
                     DMAVPSWNLHPLKGSLSGHWAVKVNGNWRLTFRFNDGNAEVVDYQDYH"
     gene            860..1465
                     /locus_tag="WHR07_001905"
     CDS             860..1465
                     /locus_tag="WHR07_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131073.1"
                     /translation="MTIYFKNGFYDDTLGSIPEGAVAVRAEEYAALLAGQTQGGQIAA
                     DSDGRPVLTPPRPSEYHEWDGKKWEIGEAAAAARFAEQKTATAFRLAAKADELKNSLL
                     AGYPQVEIDSFYRQEKEALARQADNNAPTPMLAQIAAARGVELDVLIEKVVEKSARLA
                     VAAGAIIGKRQQLEDKLNTIETAPGLDALEKEIEEWTLNIG"
     gene            1444..1740
                     /locus_tag="WHR07_001906"
     CDS             1444..1740
                     /locus_tag="WHR07_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase UvrD"
                     /protein_id="HEZ2131074.1"
                     /translation="MDAKHRLKKYVYHLLVAIDQLFNALTGGAADETLSSRTYRGARL
                     AQKPKTRWKVLYTLINGVFFDRQHCRQAYISELKGRQHDARFNQSRAAGEKGTR"
     gene            1737..1946
                     /locus_tag="WHR07_001907"
     CDS             1737..1946
                     /locus_tag="WHR07_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131075.1"
                     /translation="MNYFGMVEFLRLMAIVRPPFVFFSGTRSELPAYLDLVAELRLTG
                     WERFAGSQTLTVSSTSTAIQATTTT"
     gene            complement(2056..3198)
                     /locus_tag="WHR07_001908"
     CDS             complement(2056..3198)
                     /locus_tag="WHR07_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HEZ2131076.1"
                     /translation="MQKWQTELYSTPLWLCLTPKSTVKVLLLITVMVTLLLTEVRLNV
                     LSTFMSKGLYDSMQDLNASAFWMFAAMNAGVVLIRAFNNVVNDFLDQGLAIKWSEQLN
                     EVLTTRWLADKNYYRLQMRRHAPDNIDQRIQQDAQDFIASTIEFVRGMVNSVVTSLEF
                     AVVLWGLAGILTVFGFDIPRGIVWLVFIFVILATFIAMWIGNPLIRYNYENEKLNGDY
                     RYSLIRVRDHAESVAFYNGEQHEHGRLSDRFKAIIRNRWRIARQSVCLSGFNDMFTNG
                     IKLFPIILQAPRLFAGQIKIGDIQQTVQAFARLQNALSFFRMFYNKFTAYRARLERLY
                     GFLLSTEEQHSARQPEISEVSDGIALECKAAAAFARIGGSFCTAEA"
BASE COUNT          860 a          874 c          880 g          683 t
ORIGIN      
        1 gtttcgggat tcccgccttc gcgggaatga cggaaagtgg cgggaataac gaaaggcggg
       61 aatgaccgcg caaaaagccg ctgccccctt cggacggcac cggcaacaaa aaaccgcacg
      121 gccgaaaccg cgcgggaaag gatagtcggg cgcgcccgat aagcagcggc cgcagggtta
      181 agcccttgca cctgtttgca tcgaagacaa aggcggttcg ggaaataagg gcgcaatatc
      241 aaaagttttg cgttgcctga tttgccacaa atcataaccg gcctgcatat tcagccaaaa
      301 atcaggcgaa gtattgagca gttggcttaa acgaaccgcc atctcgggcg taatcgaaga
      361 ttgggcgttg acaatgcgcg ataaggcaac ccggctgaca cccaggcgtt tcgctatatc
      421 ggtaatgctt gcaccgttaa tatactcttt taaaacaagg cccgggtggg caggattgtg
      481 cattttcata ttattcctag tgataatcct gataatcgac aacttcggca ttgccgtcgt
      541 tgaaacgaaa agtcaaacgc caatttccgt tgactttaac cgcccaatgt cccgacaaac
      601 tgcccttgag gggatgaaga ttccaactcg gcacagccat atccgaaggc gtttgcgcgg
      661 cattcagcgc ggttagaagc agattcagtt tgacggaatg cccggcttgg atgcccgata
      721 gcgagcctgt tttaaaaaag cgttcaagcc ctttgtgttt gaaagaaaca atcatcatcc
      781 caccccgtct gtatcgccaa aggatacaaa acttttattt aattgtaaag cgacgatata
      841 caaaaaagga aaccccgaaa tgaccatcta tttcaaaaac ggcttttacg acgacacatt
      901 gggcagcatc cccgaaggcg cggttgccgt ccgcgccgaa gaatacgccg cccttttggc
      961 aggacagacg cagggcgggc agattgccgc agattccgac ggccgccccg ttttaacccc
     1021 gccgcgcccg tccgaatacc acgaatggga cggcaagaaa tgggaaatcg gcgaagccgc
     1081 tgccgccgcc cgtttcgccg aacaaaaaac cgccacggca ttccgcctcg cggcaaaggc
     1141 ggacgaactc aaaaacagcc tcttggcggg ctatccccaa gtggaaatcg acagctttta
     1201 caggcaggaa aaagaagccc tcgcgcggca ggcggacaac aacgccccga ccccgatgct
     1261 ggcgcaaatc gccgccgcaa ggggcgtgga attggacgtt ttgattgaaa aagttgtcga
     1321 aaaatccgcc cgcctggccg ttgccgccgg cgcgattatc ggaaagcggc agcagctcga
     1381 agacaaattg aacaccatcg aaaccgcgcc aggattggac gcgctggaaa aggaaatcga
     1441 agaatggacg ctaaacatcg gctgaaaaaa tacgtttacc acctgttggt agccatcgac
     1501 caactgttca acgccctaac cggcggcgcg gcggacgaaa ccctctcaag ccgcacctat
     1561 cgcggcgcgc ggctcgccca aaagcccaaa acccgctgga aggttttata caccctgatc
     1621 aacggcgtat ttttcgaccg ccaacactgc cggcaggcgt atatcagcga actgaaaggc
     1681 aggcagcacg acgcgcggtt caaccaaagc cgcgccgccg gggaaaaggg gacgcgatga
     1741 actacttcgg catggtagag tttctgcgcc tgatggcaat agtgcggccg ccatttgtct
     1801 tcttctccgg cacccgcagc gaactgcctg cttatcttga cctcgtggca gaactgcgcc
     1861 tgaccggatg ggagcgtttt gcaggcagcc aaaccttgac tgtgagcagc acatcaacag
     1921 caattcaagc tacgacgacc acctgattta taagttctga ccgcaagtag cgtactactt
     1981 ttaaaggcat aagataatcc ccgtttaaca gaccattaaa cggggataaa tttgtgcaaa
     2041 agctaataca atttcctacg cttcggcggt gcaaaagctg ccgccaattc gtgcaaaagc
     2101 tgccgccgcc ttacattcca gtgcaatgcc gtctgaaact tcgctaatct cgggttgccg
     2161 cgcgctgtgt tgttcttcgg tactcagcaa aaagccgtac agacgctcca atcgggcgcg
     2221 gtaggcggtg aatttgttgt agaacatccg gaaaaaagat agcgcgtttt gcagtcgcgc
     2281 aaaggcttgg acggtctgct ggatgtcgcc gattttgatt tgtccggcaa acaggcgcgg
     2341 cgcttgcaaa ataatgggga agagtttgat gccgttggtg aacatatcgt taaagccgct
     2401 taagcagacg ctttgccgcg cgatgcgcca acggttgcgg ataatggctt taaagcggtc
     2461 ggaaagccgg ccgtgttcgt gttgttcgcc gttgtaaaac gctacgcttt cggcgtggtc
     2521 gcgtacgcgg atgagggaat aacggtagtc gccgttgagt ttttcgtttt catagttgta
     2581 acgaatcaag gggttgccta tccacatcgc gataaaggtc gccaaaatca caaaaataaa
     2641 gacgagccaa acaatgccgc gcggaatgtc gaagccgaac acggtcagga tgccagccaa
     2701 gccccacaaa acaacggcaa attccaaaga ggtaacgacc gaattgacca tgccgcgtac
     2761 aaattcgatg gtcgaagcga tgaaatcctg cgcgtcctgt tggatacgtt ggtcgatgtt
     2821 gtccggcgcg tggcggcgca tttgcaggcg gtagtagttt ttgtcggcaa gccagcgcgt
     2881 cgtcagcact tcattgagct gctccgacca tttaatcgcc aagccttgat cgaggaagtc
     2941 gttgacgaca ttgttaaacg cccgtatcag caccacgccc gcgttcatcg cggcaaacat
     3001 ccaaaacgcg gaggcgttca aatcctgcat cgagtcgtaa agtcctttgg acataaaggt
     3061 actcaacaca ttcagccgta cttcggtcaa cagcagcgta accattaccg taatcagcag
     3121 caagactttg accgtgcttt tcggtgtcag gcaaagccaa agcggtgtgg aataaagctc
     3181 ggtttgccat ttctgcatgg gaaatttctt acggtatcaa tgccgtctga aaaagacggg
     3241 tacagttgat tttttgatga agtttgggga agttttgccg gtcagggtac attgcgt
//
LOCUS       DAWGKF010000189         3284 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.189, whole genome shotgun sequence.
ACCESSION   DAWGKF010000189 DAWGKF010000000
VERSION     DAWGKF010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3284)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3284)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3284
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.189"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(96..320)
                     /locus_tag="WHR07_001909"
     CDS             complement(96..320)
                     /locus_tag="WHR07_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131077.1"
                     /translation="MVFWLQRLKYPLLLWIADMLLYRLLGGAEIECGRCPVPPMTDWQ
                     HFLPAMGTVSAWVAVIWAYLIIESEKNGRY"
     gene            423..2573
                     /gene="dinG"
                     /locus_tag="WHR07_001910"
     CDS             423..2573
                     /gene="dinG"
                     /locus_tag="WHR07_001910"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HEZ2131078.1"
                     /translation="MLTDLEKNAIRDHYQNIGKNLPGFRPRASQREMIAAVANAFSRT
                     LAREEGGEPPKREGESIAVIEGPTGVGKSLAYLLAGGIMAQTRGKRLIVSSATVALQE
                     QLVDRDLPFLVEKSGLELTFALAKGRGRYLCPYKLYQLTQNNAQQNLLGFEAPEVLWD
                     SKPKPEELKLLHDIADEFSARRFNGDRDTWPEKIDDAIWLKVTNDRHGCLKTACPNRP
                     ECPFYLARDVLETVDVVVANHDLLLADISMGGGVILPAPENSFYCIDEAHHLPKKALS
                     RFAAEHSWNIAVWTLEKLPQLTGKIAALTDKAELANLADEAAASLLDSLHEWQFHLAE
                     EPSLSLGPSENDRRTNSEPTWLWEDGKIPEGLETTVSNTAVAVRSLLKHVIGLNDALS
                     AARREKEQDGALLDRLTGDFGIFIARIEQISAVWDLLSTVPLEGEEPLAKWITRRADD
                     KNDYIFNASPISSASHLANSLWRRAAGAVLTSATLQSLGNFNLMLRQTGLQWLPETTT
                     LALKSPFDFEKQGELYIPPIYASPKDPEAHTAAIIEWLPKLISPGEAIGTLVLFSSRK
                     QMQDVALRLPGDYLPLLLVQGELPKAVLLQKHHRAIEEGKASIIFGLDSFAEGLDLPG
                     TACVQVIIAKLPFAMPDNPIEKTQNRWIEQRGGNPFIEITVPEAGIKLIQAVGRLIRT
                     EQDYGRVTILDNRVKTQRYGQQLLAGLPPFKRIG"
     gene            2609..3223
                     /locus_tag="WHR07_001911"
     CDS             2609..3223
                     /locus_tag="WHR07_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HEZ2131079.1"
                     /translation="MNFTRLLNQVLSTVQKKGNTFSDSPLNSFGGGAPVAGAASMLLN
                     GKNRKTITKIGSTAALGYLAYRGYQMWQQNKGRATVTQSDFQPAGETEETYSRTVLRT
                     MIAAAASDGMIDEAERRTIEQESGTDPETAAWLAAEYRLPASIGDIATAVGNDEALAA
                     EAYLAARLVCADLSRKETVFLARLSQALKLDDNLVESLERQLGF"
BASE COUNT          822 a         1078 c          806 g          578 t
ORIGIN      
        1 gcacatcctg tcgccggtat tccctaagcg gtacggcaac ctaaaacaaa tgccgtctga
       61 acttccgttt cagacggcat ttttatacgg actactcaat atcttccgtt tttttcactt
      121 tcaataatca gatatgccca aatcaccgcc acccaagccg acaccgttcc catcgccggc
      181 aaaaaatgct gccaatccgt catcggcggc acagggcaac ggccgcattc gatttccgcg
      241 ccgcccaaca accggtacag caacatatcc gcaatccaaa gcaacaacgg gtatttcaaa
      301 cgctgcaacc aaaaaaccaa ccacgtccgc acgattcacc tcacccccca ttccgacaac
      361 gatattgtac cgcttccgtg caatgttaaa ataagcccac ttctaccgcc gtacaaaacg
      421 ccatgctcac cgatttagaa aaaaacgcca tccgcgacca ttaccaaaac atcggcaaaa
      481 acctgcccgg tttccgtccg cgcgcttcgc agcgggaaat gattgcggcg gttgccaacg
      541 ctttttcgcg gacgttggcg cgcgaagaag gcggcgagcc gcccaagcgc gagggcgaga
      601 gcatcgccgt aatcgaaggg ccgaccggcg tgggcaaatc gcttgcctac ctgctggcgg
      661 gcggcatcat ggcgcagacg cgcggcaagc ggctgattgt gagcagcgca acggttgcct
      721 tacaggagca gttggttgac cgcgacctgc cgtttctggt cgaaaaaagc ggtttggaac
      781 tgaccttcgc gcttgccaaa gggcgcggcc gctatctctg cccttacaaa ctctaccaac
      841 tgacgcaaaa caacgcccag caaaacctgc ttggttttga agcaccggaa gtattgtggg
      901 acagcaaacc caagcccgaa gaattgaagc tgctgcacga cattgccgac gaattttccg
      961 cccgacggtt caacggcgac cgcgacactt ggccggaaaa aatcgatgac gcgatttggc
     1021 tcaaagttac caacgaccgc cacggctgcc tgaaaaccgc ctgtcccaac cgtccggaat
     1081 gtccgtttta cctggcacgc gatgtcttgg aaaccgtcga tgtcgtcgtt gccaaccacg
     1141 accttctgct tgccgacatc agtatgggcg gcggcgtgat tctgcccgcg cccgaaaaca
     1201 gtttctattg catagacgaa gcgcaccacc tgcccaaaaa agccctcagc cgttttgccg
     1261 ccgaacattc gtggaatatt gccgtttgga cgctggaaaa actgccgcag ctgaccggca
     1321 agattgccgc gcttaccgat aaagccgaac ttgccaacct tgccgatgaa gccgccgcat
     1381 ccttgctcga cagcctgcac gaatggcagt tccatttggc ggaagagccg tctttgagct
     1441 tggggccgtc tgaaaacgac aggcgaacca acagcgaacc gacttggctg tgggaagacg
     1501 gcaaaatccc cgaaggcctc gaaaccaccg tttccaacac cgccgttgct gtgcgcagcc
     1561 tgctcaaaca cgttatcggg ctgaacgatg cgctttctgc cgcacgccgc gaaaaagaac
     1621 aggacggcgc gctcctcgac cgcctgaccg gcgatttcgg catcttcatc gcccgtatcg
     1681 aacaaatcag cgcggtttgg gatttgctct ccaccgtccc cctcgaaggc gaagagccgc
     1741 tggcaaaatg gataacccgc cgcgccgacg acaaaaacga ctacattttc aacgccagcc
     1801 ccatcagcag cgcgtcccac ctcgccaaca gcctgtggcg gcgcgcggca ggcgcggtat
     1861 tgacctccgc caccctgcaa tccttgggca actttaacct gatgctgcgc caaaccgggc
     1921 tgcaatggct gcccgagacc accaccctcg ccctcaaaag cccctttgac tttgaaaaac
     1981 agggcgaact ctacatcccc cccatatacg ccagccccaa agaccccgaa gcccacaccg
     2041 ccgccatcat cgagtggctg cccaagctca tttcgcccgg cgaagccatc ggcacgctcg
     2101 tcttgttttc ctcgcgcaaa caaatgcagg atgtcgccct gcgcctgccc ggagactacc
     2161 tgccgctctt gctcgtacaa ggcgaattac ccaaagccgt tctcctgcaa aaacaccacc
     2221 gggccataga agaaggcaaa gccagcatca tcttcggact cgacagcttt gccgaaggac
     2281 tcgacctgcc cggcaccgcc tgcgtgcaag tcatcatcgc caaacttccc ttcgccatgc
     2341 ccgacaaccc catcgaaaaa acccaaaacc gctggataga acagcgcggt ggcaaccctt
     2401 tcatcgaaat caccgtcccc gaagccggca tcaaactcat ccaggccgtc ggccgcctca
     2461 tccgcaccga acaagactac ggccgcgtaa ccatcctcga caaccgcgtc aaaacacagc
     2521 ggtacggcca acaattatta gccggcctgc caccgtttaa aaggataggg taaacctacc
     2581 gccctgcccg caacagaaag gaaaaatcat gaacttcacc cgactgctca accaagtctt
     2641 aagcacggtt caaaaaaaag gcaacacctt ctccgacagc ccgctcaatt cattcggcgg
     2701 aggcgcgccg gttgccggtg ccgcgtccat gctgctgaac ggtaaaaacc gcaaaaccat
     2761 taccaaaatc ggttcgaccg ccgctttggg ctacctcgcc taccggggct atcagatgtg
     2821 gcagcaaaac aaagggcggg caaccgtaac acaaagcgat ttccaacctg ccggagaaac
     2881 tgaagaaaca tacagccgca ccgtattgcg caccatgata gccgccgccg cttcagacgg
     2941 catgatagac gaagccgaac gccggactat cgaacaggaa agcggcacag accccgaaac
     3001 tgccgcatgg ctcgccgccg aataccgcct gcccgcaagc atcggggaca tcgccaccgc
     3061 cgtcggcaac gatgaggcgt tggcggcgga ggcctatctg gcggcaaggt tggtctgtgc
     3121 cgatttgtcg cggaaagaaa ccgtcttcct cgcccgcctg tcgcaggctt tgaaactgga
     3181 tgacaatctg gtggagagtt tggaaaggca attggggttt tgatgacaca gccagggagg
     3241 gaaaatcatc aaaaaacggt tattccgacc ccggcctcaa aacg
//
LOCUS       DAWGKF010000190         3282 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.190, whole genome shotgun sequence.
ACCESSION   DAWGKF010000190 DAWGKF010000000
VERSION     DAWGKF010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3282)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3282)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3282
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.190"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(150..296)
                     /locus_tag="WHR07_001912"
     CDS             complement(150..296)
                     /locus_tag="WHR07_001912"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131080.1"
                     /translation="MMRNGGNLSGITENERKSGQGGEAADSTDRTEPIHLVLEHLRES
                     FSLS"
     gene            1058..3220
                     /locus_tag="WHR07_001913"
                     /pseudo
     CDS             1058..3220
                     /locus_tag="WHR07_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704630.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
BASE COUNT          877 a          932 c          741 g          732 t
ORIGIN      
        1 caaaagtggg aatctagaaa tgaaaagcag caggaattta tcggaaatga ccgaaactga
       61 acggactgga ttcccgcttt cgcgggaatg acggcgacag ggttgctgtt atagtggatg
      121 aacaaaaacc agtacgtcgt tgcctcgcct tagctcaaag agaacgattc tctaaggtgc
      181 tcaagcacca agtgaatcgg ttccgtccta tccgtactgt ctgcggcttc gccgccttgt
      241 cctgatttcc gttcgttttc ggttattccc gataaattac cgccgtttct catcatttct
      301 ttaacccttc gtcattcccg cgcaggcggg aatctagttt ttttgagttc cagttgtttc
      361 tgataaattc ttgcagcttt gagttcctag attcccactt ttgcgggaag gacgcggaaa
      421 ggttgctttt cgtcattccc gcgcaggctt cgtcattccc gcgcaggcgg gaatccagtc
      481 tgttcggttt cggttttttc cgatagattc ctgccgcgtt aggggttcta gattcccgct
      541 ttcgcgggaa ggacgcggaa aggttgcttt tcgtcattcc cgcgcaggcc tcgtcattcc
      601 cgcacaggct tcgtcattcc cgcgcaggcg ggaatccagt ctgttcggtt tcagtcattt
      661 ccgatagatt cctgccgcgt taggggttct agattcccgc tttcgcggga atgacgcgga
      721 aaggttgctt ttcgtcattc ccgcatttgt taatccacta tatttccgcc gttttttata
      781 gtggactaac aaaaaccagt acagcgttgc ctcgccttgc cgtactatct gtactgtctg
      841 cggcttcgtc gccttatcct gatttttgtt agtccactat acatttccga caaaacctgt
      901 caacaaaaaa caacacttcg caaataaaaa cgataatcag ctttacacaa atcccccctc
      961 tcgttaatat aaacaaaaat aattattatt tttcttatcc tgccaaacct taacggtttg
     1021 gatttacttc ccttcataca ctcaaaagga cgaacaaatg aacgccccgt ttttccgcct
     1081 cagcctgctc tcgcttaccc tggcggcagg ttttgcccat gcggcagaaa ataatgccaa
     1141 tgtcgcattg gataccgtta ccgtaaaagg cgaccgccaa ggcagcaaaa tccgtaccaa
     1201 catcgttacg cttcaacaaa aagacgaaag caccgcaacc gatatgcgcg aactcttaaa
     1261 agaagagccc tccatcgatt tcggcggcgg caacggcacg tcccaattcc tgacgctgcg
     1321 cggcatgggt cagaactctg tcgacatcaa ggtggacaac gcctattccg acagccaaat
     1381 cctttaccac caaggcagat ttattgtcga tcccgctttg gttaaagtcg tttccgtaca
     1441 aaaaggcgcg ggttccgcct ctgccggtat cggcgcgacc aacggcgcga ttatcgccaa
     1501 aaccgtcgat gcccaagacc tgctcaaagg cttggataaa aactggggcg tgcgcctcaa
     1561 cagcggcttt gccagcaacg aaggcgtaag ctacggcgca agcgtattcg gaaaagaggg
     1621 caacttcgac ggtttgttct cttacaaccg caacgatgaa aaagattacg aagccggcaa
     1681 aggtttccgc aatgacaacg gcggcaaaac cgtaccgtac agcgcgctgg acaaacgcag
     1741 ctacctcgcc aaaatcggaa caagcttcgg cgacgacgac caccgcatcg tattgagcca
     1801 catgaaagac caacaccgag gcatccgcac tgtgcgtgaa gagtttgccg tcagcgaaaa
     1861 aaattcacgg ataactatta aacgccaagc ccctgcttac cgcgaaacca cttaatccaa
     1921 caccaacttg gcgtacaccg gcaaagattt gggctttgtc gaaaaactgg atgccaacgc
     1981 ctatgtgttg gaaaagaaac gctattccgc cgatgacaaa gataacggct acgcaggcaa
     2041 tgtaaaaggc cctaaccata cccgaatcac cactcgaggt atgaatttca acttcgacag
     2101 ccgccttgcc gaacaaaccc tgttgaaata cggtatcaac taccgccatc aggaaatcaa
     2161 accgcaagcg tttttgaact cgcaattttc tatcccaaaa acagaaaaaa aagacggtaa
     2221 agatgttgct aaatcatcgg aacaacaaac caaagaccgc aaagacgaaa ccattgtcca
     2281 ttcctacaaa ctttccaacc cgaccaaaac cgataccggc gcgtatatcg aagccattca
     2341 cgagattgac ggttttaccc tgaccggcgg gctgcgttac gaccgcttca aggtgaaaac
     2401 ccatgacggc aaaaccgttt caagcagcaa ccttaacccg agtttcggcg tgatttggca
     2461 gccgcacgaa cactggagct tcagcgcgag ccacaactac gccagccgta gcccgcgcct
     2521 gtatgacgcg ctgcaaaccc acggcaaacg cggcatcatc tcgattgccg acggcaccaa
     2581 agccgaacgc gcgcgcaata ccgaaatcgg cttcaactac aacgacggca cgtttgccgc
     2641 caacggcagc tacttctggc agaccatcaa agacgcgctt gccaatccgc aaaaccgcca
     2701 cgactctgtc gccgtccgtg aagccgtcaa cgccggctac atcaaaaacc acggttacga
     2761 attgggcgcg tcctaccgca ccggcggctt gactgccaaa gtcggcgtaa gccacagcaa
     2821 accgcgcttt tacgataccc atcctaaaaa actgttgagc gcgaatcccg agtttggcgc
     2881 acaagtcggc cgcacttgga cggcctccct tgcctaccgc ttccaaaatc cgaatctgga
     2941 aatcggctgg cgcggacgct atgttcaaaa agctacgggt tcgatattgg cggcaggtca
     3001 aaaaaaccgc gacaaacaat tggaaaacgt tgtacgcaaa ggtttcggtg tgaacgatgt
     3061 cttcgccaac tggaaaccgc tgggcaaaga cacactcaat gtcaatcttt cagtcaacaa
     3121 cgtgtttaac acgttctact atccgcacag ccaacgctgg accaataccc tgccgggcgt
     3181 gggacgtgat gtacgcttgg gcgtgaacta caagttctaa aacgcacatc ccgaaaaaat
     3241 gccgtctgaa agcctttcag acggcatctg tcctgataat tt
//
LOCUS       DAWGKF010000191         3254 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.191, whole genome shotgun sequence.
ACCESSION   DAWGKF010000191 DAWGKF010000000
VERSION     DAWGKF010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3254)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3254)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3254
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.191"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(12..1307)
                     /gene="tyrS"
                     /locus_tag="WHR07_001914"
     CDS             complement(12..1307)
                     /gene="tyrS"
                     /locus_tag="WHR07_001914"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEZ2131081.1"
                     /translation="MSVIQDLQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSL
                     HIGHLLPVLALRRFQQAGHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIR
                     SQLTPFLSFEGGNAAIMANNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRD
                     GAGISFTEFAYSLLQGYDFAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLYQKQVFG
                     LTLPLVTKSDGTKFGKTEGGAVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSI
                     EEIDAIEAKDKASGSKPEAQRILAEEMTRLIHGEEALAAAQRISESLFAEDQSSLTES
                     DFEQLALDGLPAFEVSDGINVVEALVKTGLASSNKEARGFVNSKAVLLNGKPAEANNP
                     NHAAERPDDACLLNGEHKRFGKYTILRRGKRNHALLVWK"
     gene            complement(1370..3248)
                     /locus_tag="WHR07_001915"
                     /pseudo
     CDS             complement(1370..3248)
                     /locus_tag="WHR07_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259993.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
BASE COUNT          764 a          784 c          963 g          743 t
ORIGIN      
        1 cggcaatcgg attatttcca aaccaaaagc gcgtggttgc gtttgccgcg ccgaaggatg
       61 gtgtatttgc cgaaacgttt gtgttcgccg ttcagcaggc aggcatcgtc ggggcgttcg
      121 gcggcgtggt tggggttgtt ggcttcggca ggtttgccgt tgagcaaaac cgctttgctg
      181 ttcacaaagc cgcgcgcttc tttattggag gatgccaaac cggttttgac caaggcttcg
      241 acgacattga tgccgtctga aacttcaaat gcaggcaggc cgtcgagggc gagctgctcg
      301 aagtcgcttt cggtcaggct gctttggtct tcggcaaaca ggctttcgga aatgcgctgc
      361 gcggcggcaa gggcttcttc gccgtgaatc aggcgggtca tttcttcggc gaggatgcgt
      421 tgcgcttcgg gcttgctgcc gctggcttta tctttcgctt cgatagcgtc gatttcttcg
      481 atggacagga aggtaaagta tttcaggaat ttatacacat cggcatcggc gactttcagc
      541 cagaattggt agaactgata gggcgaggtt tttttcgcgt tcagccacac cgcgccgcct
      601 tcggttttgc cgaatttggt gccgtctgat ttggtaacca aaggcagagt cagtccgaac
      661 acttgttttt ggtacaggcg gcgggtcagg tcgataccgg cagtgatgtt accccattgg
      721 tcggagccgc cgatttccaa aaccgcgccg tggcgtttgt tcaactcggc gaagtcgtaa
      781 ccttgcagca gggaataggc gaactcggtg aaggaaatgc ctgcgccgtc gcggtcgatg
      841 cgctgtttga cggattcttt gttcagcatg gcgttgacgg agaaatgctt gccgatgtcg
      901 cgcaggaagt cgaggcagtt cattttgccg aaccagtcag cgttgttcgc cataatggcg
      961 gcgtttccgc cttcaaagct caagaaaggg gttaattggc tgcggatgct ttccacccag
     1021 ccggcaacgg tttcggcgga attcaagctg cgttcggcgg ctttgaagct ggggtcgccg
     1081 atcataccgg tcgcaccgcc caccagtgca atcggcgtat gccccgcctg ttggaagcgg
     1141 cgcaatgcca atacgggcag caggtgtccg atgtgcaggc tgtcggcggt cgggtcgaag
     1201 ccgcaataaa gggaaatttt ttgttcgttc aacaaagcgt ctaaggcttc gatgtcggtg
     1261 gtttgcgcga ttaggccgcg cgattgcagg tcttggatga cgctcatcgg tctctttcaa
     1321 aaaaaattag cggttttgca aaccgccgat tgtaacaaat ttaagcgaat caatggttat
     1381 ggcgcgtatc gagaaaccgt tgtttttcgg aaaaacgctt cgccaattcc gtgccgccgt
     1441 aagggttgat gtggtctttg tccgagtaaa ccggcaatcc gccgatttgg aaatttgcgg
     1501 ggatataggc ggcggcatca ataatataga cgttggggta tttggctgcc aattccctga
     1561 tgcgtgcatt ggctttcaga gtgctttcgt cgtccgggcg cagggtttgg cggtaacccg
     1621 gtatgcgtga agacaagata taggcgcgtt gtacgttgta agacgaggca aggttgtccg
     1681 ccatcaggta aacggcttgt ttttcggatg agagtttgtg cagcatacgg tcgaattttt
     1741 ggaaaaaacc ggcatcgtag gcaagggagc ggctgttttc gggcatttgg ctgccccagc
     1801 gcatcgccaa aaccactttt gaatacaggg gcaggtgttc ttcggcatag cggtaaacgg
     1861 cgcggcaggc ggcccagttt tggaacacac gggacgcgta gccttccaca taggcgcaag
     1921 cgtcggcgga aaccatagtg gcggaccatt tttctttttt gcccacggca tcgaagaatg
     1981 ttttgtaatg gtcggcgtgg gagtcgccca aaaccagcag ctccggctgt ttttccgtat
     2041 ccccccacag gcattgtttg ccggtattgt tgtggcagga ggtgttggaa cgcgtcagcc
     2101 ccaagcggtc gtattgcgcc ataaacggca gcctcatcgc gaaaaacgag cccgccccca
     2161 aaatgagcat aggcaaggca taaatccata aaacggattg tgcgaacgaa cctttccatt
     2221 ttttaaacgg cttttcgatg cagtgataag aaatcaggga aagcagcaat atcaggacga
     2281 ttgctgccgc tgttgaataa ggcggcaggt tgtccgggcc gatatagcgc ataaaggcca
     2341 atatcggcca atgccacaga taaagcgaat aggaaatcaa accggcggca acagtgattt
     2401 tccattggaa aaatttttta agcgggtgtt cgtaatgatt gaaataaatc agcgcggcaa
     2461 cagccagaca gggaatcaaa gcggcgggtc ccgggaaata ggcggtttgt ttcgaatagg
     2521 caaacaggca ggcggacagt atgcacgcgg aaaacaatgc gccggcggcg gcacagcatc
     2581 tgccaacggc gagattccgc tgttgccggt accgcatcca cacggcggtc agcgatccga
     2641 ccagcatttc gcaggcgcgc aggtggggca ggtaatattt atcgaacgcg gaaggcataa
     2701 aggaagcggc aaggcttaag gcgcacaatg cggcgaggaa gccgaactgt acgcgcgggc
     2761 ttttgcgggc gacaagcagc agcaatatcg gaaagacaaa gtaaaattgt tcttcgaccg
     2821 acaaagacca aatgtgcagc aagggctttt cttcctgcgc gggatcgaaa taatccttcc
     2881 cccttgcaaa atacaggttg gaggcgaaac ccaaggcggt cagcgcggat ttccacaaaa
     2941 gaaagaaatc atctttggtg aataaaaaga agccgcctat cagcgttgcc gccaatacgg
     3001 cgaaaaatgc gggcaaaatc cgtttgatgc ggcggatata aaatgccttc agggaaaacc
     3061 tccccccccc ccgacatttc gcggtgaaga atcatcgtca tcaaaaagcc tgaaatcacg
     3121 aaaaatatat cgacaccgag aaacccgccc ggcagccaat ttttttcgat atggaacacg
     3181 atgacggaca agacggcggc ggcgcgcaat gtgtcgatgt ccgggcggta gggtaaggct
     3241 tggctcataa tgtt
//
LOCUS       DAWGKF010000192         3232 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.192, whole genome shotgun sequence.
ACCESSION   DAWGKF010000192 DAWGKF010000000
VERSION     DAWGKF010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3232)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3232)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3232
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.192"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(119..1219)
                     /locus_tag="WHR07_001916"
     CDS             complement(119..1219)
                     /locus_tag="WHR07_001916"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HEZ2131082.1"
                     /translation="METQLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFTPYPDR
                     LRRQLLDLQDTGADELHRSRILSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTV
                     RHAPEHGYSIQLADLPLLAERTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDNRE
                     TRAVLNIGGIANISVLPPDAPAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNI
                     LPQLLDRLLAHPYFARPHPKSTGRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVF
                     DAVSHAAADTRQMYICGGGIRNPVLMADLAECFGTRVSLHSTAELNLDPQWVEAAAFA
                     WLAACWINRIPGSPHKATGASKPCILGAGYYY"
     gene            1544..3118
                     /locus_tag="WHR07_001917"
     CDS             1544..3118
                     /locus_tag="WHR07_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HEZ2131083.1"
                     /translation="MAQIQMSANVKTINAVFAAMLVGTVGYFIYWGLGYTHYNYAALF
                     IIATMFGVFMAFNIGGNDVANSFGTSVGAGTLTIPQALLIAAVFEVSGAVIAGGEVTN
                     TIRKGIVDLKGVDFEPIQFVFIMMSALLAAALWLLFASKKGLPVSTTHSIIGGIVGSA
                     VCMAVMNDAASGDLIRWGKLGGIGVSWVLSPVLGGAVSYFLFSRVKKNVLDYNAWAEG
                     TLKGIKQEKKAYKERHRLFFEGLSEAEKVEYATKMAHDAQIYDEPEFDPQELQSEYYR
                     GLYAFDNRKNNVDSYKALHSWIPFIASFGAMMISAMLIFKGLKNLHLGMSNVNSFLTI
                     FMIGAAVWMGTFVFAKSLKRKDLGKSTFQMFSWMQVFTACGFAFSHGANDIANAIGPF
                     AAIMDVLRTNSVAAQNVVPPIAMLTFGIALIVGLWFVGKEVIKTVGTSLAEMHPASGF
                     TAELSAASVVMGASLMGLPVSSTHILVGAVLGIGLVNRNANWKLMKPIGLAWVITLPA
                     AAVLSVVCYLVLQAVF"
BASE COUNT          665 a          804 c          953 g          810 t
ORIGIN      
        1 gcggggtttg tttgatgttg aacggatttt gagtgtaaag ggattttaag ggtttgtaaa
       61 caaaaggggc gaaaatgccg tctgagcggc ggaaatggct ttcagacggt atttgcgctc
      121 aataataata tcccgcgccc agaatacacg gtttggatgc gccggttgct ttgtgcgggc
      181 tgccgggaat gcggttaatc caacacgccg ccaaccacgc aaatgcggct gcctccaccc
      241 attgaggatc gaggttcagt tcggcggtgc tgtgcaggga aacgcgtgtg ccgaaacatt
      301 ctgccaaatc cgccattaaa acaggattgc ggatgccgcc gccgcaaata tacatttgac
      361 gggtatctgc cgctgcgtgt gagacggcgt cgaaaacggt ttgcgcggta aaacgggaaa
      421 gcgtccgcaa tacgtcgtat cggttttcgc cgccgtcaag gtaggtttcg agccaattta
      481 gggcaaacag ttcgcgcccc gtgcttttgg ggtggggtcg tgcgaaatac gggtgggcga
      541 gcagcctgtc gagcagttgc ggcaatatgt tgccttgtgc cgcctttgca ccgtttttgt
      601 cgtaaggaag ctgccagtgt gcctgcgtcc acgcgtccat cagcatattg cccggccctg
      661 tgtcgaagcc gaaggcgggt gcgtcggggg ggagtacgct gatgttggca atcccgccga
      721 tgttcagtac cgcgcgtgtt tccctgttgt cgcggaacag ggcttcgtga aaggcgggga
      781 cgagtggcgc gccttgtccg ccggccgcaa ggtcgcggct gcggaagtcg ccgacggtaa
      841 aaatccgcgt ccgttccgcc agcagcggca aatcggcaag ctgtatgctg taaccgtgtt
      901 ccggcgcgtg tcggacggtt tgcccgtggc agccgagggc ggtaatgtcg gatggtgcga
      961 ggttttgact gcacagcagt tcggcggcgg tttgcgcgta caggcggctg agttcttgcg
     1021 acaaaatcct gctgcggtgc agttcgtctg cgcctgtgtc ctgcaaatcc agcaattggc
     1081 ggcgcagcct gtcgggatag ggggtaaagg cgtgcccttc cgcgcccagc catttgccgc
     1141 cgtccatccg tatcagtacg gcatccgccc cgtccatgct ggttcccgac atgatgccga
     1201 tgtaaagctg tgtttccatc atcactccca aactggtgca aaacgccatt ttaacgtgta
     1261 ttgacgctcg tataccgatt tgccgccgca gtgtaaataa agtgtaaata aatgtttcaa
     1321 gacggatgga aaaatattat aatgcgcccg caacatccag tagtagaagt gtcatacaaa
     1381 ccgtttccgg cagcagtttt gcattcggtc aggtttgggg gtatttggat gcggttcaga
     1441 aggaaggatg cgtctgccat atcccgaaac ggcagttcga ccggaggcag cagtacagtg
     1501 tcggcaacac tcatgatttc caccacatta aaggaagatt gccatggctc aaatccaaat
     1561 gagcgcaaat gttaaaacca tcaacgccgt ctttgccgcc atgctggtag gtacagtcgg
     1621 ctattttatt tattggggct tgggttatac ccattacaat tacgccgcct tattcattat
     1681 tgccacgatg ttcggcgtgt ttatggcgtt caacatcggc ggcaacgatg ttgccaattc
     1741 tttcggcacc agcgtcggtg cgggtacgct gaccatcccg caggctttgc tgattgcggc
     1801 ggtatttgag gtcagcggcg cggtcatcgc gggcggcgag gtaaccaata ccatacgcaa
     1861 aggcatcgtc gatttgaagg gtgttgattt cgaacccata cagtttgtgt ttattatgat
     1921 gtccgcgctt ttggcggcgg cgttgtggct gttgtttgcc tcgaaaaaag ggcttccggt
     1981 atctaccacc cattccatta tcggcggcat tgtcggcagc gcggtatgta tggcggtaat
     2041 gaacgatgcc gcatcgggcg atttgatacg ttggggcaag ctgggcggta ttggtgtttc
     2101 ttgggtattg tcgcccgtgt tgggcggcgc ggtgtcctat ttcctgtttt cgcgcgtcaa
     2161 gaaaaacgtc ttagattaca acgcttgggc ggaaggcacg ctcaagggca tcaagcagga
     2221 aaaaaaggcc tataaagaac ggcaccgcct gtttttcgag ggtttgtccg aagccgaaaa
     2281 agtcgagtac gccaccaaaa tggcgcacga cgcgcaaatt tacgacgaac ccgaattcga
     2341 tccgcaagag ctgcaatcgg agtattaccg cggtctttat gcgttcgaca accgtaaaaa
     2401 caatgtcgat tcctacaaag cactgcattc ttggattccc tttatcgctt cgttcggcgc
     2461 gatgatgatt tccgctatgc tgattttcaa gggcttgaaa aacctgcatt tggggatgag
     2521 caacgtcaac agcttcctga ccatctttat gataggcgcg gcggtgtgga tggggacgtt
     2581 tgtgtttgcc aaaagcctca agcgtaaaga cttgggcaaa tcgacctttc agatgttttc
     2641 atggatgcag gtctttaccg cctgcggctt cgcattcagc cacggggcga acgatatcgc
     2701 caacgccatc ggtccgtttg ccgcgattat ggatgttttg cgtaccaaca gcgttgccgc
     2761 gcaaaatgtc gtccccccga ttgcgatgct gactttcggc atcgcgctga ttgtcggttt
     2821 gtggtttgtc ggtaaagagg tgattaaaac cgtcggtacg agtttggcgg aaatgcaccc
     2881 cgcctcgggt tttaccgccg aactgtccgc cgcatccgtc gtgatgggcg cgtcgctgat
     2941 ggggctgccc gtgtccagta cgcatatctt ggtcggcgcg gtactcggca tcggtctggt
     3001 caaccgcaat gccaactgga aactgatgaa gcccatcggt ttggcgtggg tcattaccct
     3061 gcctgccgcc gccgtattgt cggttgtctg ctacttggtt ttacaggcag tattctgatt
     3121 gtaaaatact gatgccgtct gaacccgtgt tcagacggca ttttgttgat ggaatgtgcg
     3181 ggcttgtgcc ttatgcacaa tctgttctgt cgggatatgc cgtttggtat ag
//
LOCUS       DAWGKF010000193         3108 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.193, whole genome shotgun sequence.
ACCESSION   DAWGKF010000193 DAWGKF010000000
VERSION     DAWGKF010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3108)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3108)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3108
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.193"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            25..567
                     /locus_tag="WHR07_001918"
     CDS             25..567
                     /locus_tag="WHR07_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEZ2131084.1"
                     /translation="MQSWKERRDFNIVKQDLDFSCGAASVATLLNNFYGQKLTEEDVL
                     KKLDKEQMPASFEDMRRIMPDLGFEAKGYALSFEQLAQLQIPVIVYLKYRKDDHFSVL
                     RGIDGNTVLLADPSLGHVSMSRAQFLDAWQTREGNLAGKILAVVPKGRDAGGDKAFFT
                     RSPKRQTEFAVGQVKWWRAY"
     gene            697..2358
                     /locus_tag="WHR07_001919"
     CDS             697..2358
                     /locus_tag="WHR07_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HEZ2131085.1"
                     /translation="MTESITRDSMQYDVVIVGAGPSGLSAAIKLKQLAEQNGREISVC
                     VVEKGSEAGAHSLAGAVIDPIALNELIPDWKEKGAPLTRTVTQDKVLFLTEKKAFNLP
                     ITPNFDNHGNYIVSLGEVVRWLAEQAENLGVEIYPGFAAAEVLYHKDGSVKGIATGNM
                     GVGKNGEPTDSFQPGMELWARQTLFAEGCRGSLSKQIIERFKLDQNSQPQTYGLGIKE
                     VWEVPSEQHQPGLVVHSAGWPLDSKTYGGAFVYHFDDNKVAVGFVVGLDYQNPYLSPF
                     EEFQRFKTHPEIRKTFEGGRRIAYGARSLIEGGFQSLPKLSFKGGVLVGDAAGFLNMP
                     RIKGIHTAMKSAMLAAEAVFPLLENLEEVENFDSGKEAADYQQRFEQSWLYQELYAAR
                     NVRPSFKWGVYLGSIYTGIDQMIFRGKAPWTLKHHGKDNEQLKKAAACKPIDYPKPDG
                     VLTFDRLSSVFLANLAHEENQPDHLVLNNPQTMIDVNYKEYASPETRYCPAGVYEIVE
                     ENGSPRLQINAANCVHCKTCDIKDPTQNITWICPESASGPNYGGM"
     gene            complement(2492..2986)
                     /locus_tag="WHR07_001920"
     CDS             complement(2492..2986)
                     /locus_tag="WHR07_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase accessory protein NosL"
                     /protein_id="HEZ2131086.1"
                     /translation="MKKTLLAIVAVSALSACRQAEEGPPPLPRQISDRSVGHYCSMNL
                     TEHNGPKAQIFLNGKPDQPVWFSTIKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNP
                     NADTEWMDAKKAFYVIDSGFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVGFDDMPDT
                     YIFK"
     gene            complement(2983..>3108)
                     /locus_tag="WHR07_001921"
     CDS             complement(2983..>3108)
                     /locus_tag="WHR07_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ2131087.1"
                     /translation="AGMAGLSGQISLTVPVLLTAQVLWVIIPLVLAAGIFRKRQI"
BASE COUNT          774 a          776 c          841 g          717 t
ORIGIN      
        1 cctgttgctt atggaaaaat caaagtgcag agttggaaag agaggcggga tttcaatatt
       61 gtaaagcagg atttggattt ttcctgtggg gcggcttcgg tggcgacgct tttgaacaat
      121 ttttacgggc aaaagctgac ggaagaggac gtgttaaaaa aactggataa ggagcagatg
      181 cccgcgtcgt ttgaggatat gcggcgcatt atgcctgatt tgggttttga agcgaaaggc
      241 tatgccctgt ctttcgagca gcttgcacag ttgcaaatcc ccgtcatcgt gtatctgaaa
      301 taccgcaagg atgatcattt ctcggtattg cgcggtatag acggcaatac ggttttgctt
      361 gccgacccgt cgctgggtca tgtttcaatg agcagggcgc agtttttgga tgcttggcaa
      421 acccgtgagg gaaatttggc aggtaagatt ttggcggttg tgccgaaagg gagggatgcc
      481 ggcggggata aggcgttttt cacacgcagt ccgaaacgtc agacggagtt tgcggtcgga
      541 caggtaaaat ggtggcgtgc ttattgaaat ttcgacaaag gtcgtctgaa aaccgaaaat
      601 atggttttca gacgaccttt gttgtatttg gtaactatat gttctcgttg tataattacg
      661 gatttgcaat tcaataataa atacacagga accgccatga cagaatccat cacccgcgac
      721 agtatgcaat acgatgtcgt gattgtcggc gcaggcccat cgggtttgtc cgccgccatc
      781 aaactcaagc agcttgccga acaaaatggg cgcgaaatca gcgtttgcgt ggtggagaaa
      841 ggttcggagg cgggtgcaca ttcgctggcg ggcgcggtta tcgatccgat tgcgctgaat
      901 gagttgattc ccgactggaa agaaaaaggc gcgccgctga cgcgtacggt aacgcaggac
      961 aaagtgttgt tcctgactga gaaaaaagcg ttcaatctgc ctattacccc aaatttcgac
     1021 aatcacggca actacatcgt cagcttgggc gaagtcgtgc gctggttggc ggagcaggcg
     1081 gaaaatttgg gcgtggaaat ttatccgggc tttgccgctg ccgaagtgct gtatcacaaa
     1141 gacggttcgg tcaaaggcat tgcaaccggc aatatgggcg tgggcaaaaa cggcgagccg
     1201 accgattcat tccagcccgg catggagctt tgggcacggc aaaccctgtt tgccgagggc
     1261 tgccgaggtt cgctttccaa acaaatcatc gaacgcttca aactcgacca aaacagccag
     1321 ccgcaaactt acggcttggg cattaaagaa gtttgggaag tgccgtccga acagcatcag
     1381 cccggtttgg tggtgcacag cgcaggctgg ccgctggaca gcaaaaccta cggcggcgcg
     1441 tttgtttacc atttcgacga caacaaagtt gccgtcggct tcgtggtcgg tttggactat
     1501 caaaatcctt atctgtcgcc gtttgaagag ttccaacgtt tcaaaaccca tcccgaaatc
     1561 cgcaaaacct ttgaaggcgg ccgccgcatt gcttacggtg cgcgttcgct gattgaaggc
     1621 ggttttcaaa gtttgccgaa gctctcgttc aaaggcggcg ttttggtcgg cgatgcggcg
     1681 ggtttcctca atatgccgcg catcaaaggc attcataccg cgatgaaatc cgccatgctc
     1741 gccgccgaag ccgtgttccc cttgttggaa aaccttgaag aagtggaaaa cttcgacagc
     1801 ggcaaagagg cggcggatta tcagcaacgt tttgaacaaa gctggctgta tcaagagctt
     1861 tacgccgcgc gcaatgtccg tccgtcattc aaatggggcg tttacctcgg ctcaatctac
     1921 accggcatcg atcagatgat tttcagaggc aaagccccgt ggaccttgaa acatcacggc
     1981 aaagacaacg agcagcttaa aaaagccgcc gcgtgcaagc cgattgatta tccgaaaccc
     2041 gacggcgtat tgaccttcga ccgcttgagc agcgtcttcc ttgccaatct cgcgcacgaa
     2101 gaaaaccagc ccgaccattt ggtgctgaac aatccgcaaa cgatgataga cgtgaactac
     2161 aaagaatacg cctcacccga aacgcgctat tgtccggccg gcgtgtatga aatcgtcgaa
     2221 gaaaacggca gcccgcgcct gcaaatcaac gcggcaaact gcgtgcactg caaaacctgc
     2281 gacatcaaag acccgacgca aaacatcact tggatttgcc ccgaaagcgc gagcgggccg
     2341 aattacggcg ggatgtaaac cttattccgc cgttacgccc ggtcaggaat aaggaatggg
     2401 gcagttgttc aaacctgccc cgtttgaacc tatgacaaaa aatgccgtct gaaccttggc
     2461 ttcaacgttc agacggcatt tttgtttgga tttacttgaa aatataggta tcaggcatat
     2521 cgtcgaaacc gacaacctta ccgcctttat cctttgcaaa tttctcagcc tgctctttgt
     2581 tgccgaacgg cagcgcgtct tccgcaccca taccgccgat aaagccgctg tcgatgacgt
     2641 aaaaggcttt tttcgcatcc atccactccg tgtcggcatt gggattcgtc caatcggtaa
     2701 cattgcccat atcggtaacg taaatcacgc ggatgccttt gggttcttcg ggcagcttgg
     2761 tatagccgaa catctgcttg atggtggaga accaaacggg ctgatcgggt ttgccgttca
     2821 agaaaatctg ggctttgggg ccgttgtgtt cggtcaggtt catactgcaa tagtgtccga
     2881 ccgaacggtc gctaatctgc cggggtaaag gcggcggccc ctcttccgcc tgccggcagg
     2941 cacttaaggc ggaaacggca acaattgcca acagggtttt cttcatattt gtcgctttct
     3001 aaaaattccg gctgccaaaa caagcggaat gataacccat aaaacctgag cggtcagcaa
     3061 aacggggacg gtcaggctga tttgtccgct caaacccgcc atacccgc
//
LOCUS       DAWGKF010000194         3101 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.194, whole genome shotgun sequence.
ACCESSION   DAWGKF010000194 DAWGKF010000000
VERSION     DAWGKF010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3101)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3101)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3101
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.194"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..211)
                     /locus_tag="WHR07_001922"
     CDS             complement(<1..211)
                     /locus_tag="WHR07_001922"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131088.1"
                     /translation="MLPTRKTARKIQARHIALPFSGKPQFYRPQERLSKQAQATPPGH
                     FRFHRLSVVRIMQQHHQRITLFGRQQ"
     gene            271..894
                     /locus_tag="WHR07_001923"
     CDS             271..894
                     /locus_tag="WHR07_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEZ2131089.1"
                     /translation="MKKPTDTLPVNLQRRRLLCAAGALLLSPLAHAGAQREETLADDV
                     ASVMRSSVGSVNPPRLVFDNPKEGERWLSAMSARLARFVPEEEERRRLLVNIQYESSR
                     AGLDTQIVLGLIEVESAFRQYAISGVGARGLMQVMPFWKNYIGKPAHNLFDIRTNLRY
                     GCTILRHYRNLEKGNIVRALARFNGSLGSNKYPNAVLGAWRNRWQWR"
     gene            1005..2387
                     /locus_tag="WHR07_001924"
     CDS             1005..2387
                     /locus_tag="WHR07_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ2131090.1"
                     /translation="MARDNRIQMFPHEWRASTTLSGVYALRMLGMFLVLPVLAVYAAS
                     LPGAEGNKTLVGLAMGIYGLTQALLQLPLGIASDKFGRKKTIYVGLIVFAAGSFLAAA
                     ADTLPMLIAARAIQGAGAVSAAVTALLADLTRDGVRTRAMAMIGLSIGLTFSVSLVVA
                     PVIADAVGVRGLFLLTGILTVASIGVVAWMTPDPEVSKLHEDTQAQPSRIGEVLKNRR
                     LLTLDFGIFALHAAQMALFTALPFAMTQLGLEKIQHWKVYLPSTITGLVVMVPLIIVG
                     ETRNKLKQVFVLGIVCIAAAQLGLLSGMRSVGLITAYLVVYFIGFNVLEASLPSMVSK
                     IAPSDLKGTAMGVYNTMQSLGLFAGGAAGGLLFQKYGFSGVFAFCSILMLLWLVIAVL
                     SPAPKPVKNLSYPVGGVWQGNQEGLYRALSELEGVEDIGFSFDGQTVYLKVLQKGFDQ
                     AAAEKIITGV"
     gene            2391..2915
                     /locus_tag="WHR07_001925"
     CDS             2391..2915
                     /locus_tag="WHR07_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEZ2131091.1"
                     /translation="MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQ
                     RVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRIQSRKYQGKDGIERTAYDIVANE
                     MKMLGGRNENSGGAPYEEGYGQSQEAYQRPAQQSRQPASDAPSHPQEAPAAPRRQPVP
                     AAAPVEDIDDDIPF"
BASE COUNT          622 a          839 c          938 g          702 t
ORIGIN      
        1 cctgctgccg cccgaaaagc gtgatgcgct gatggtgctg ctgcataatc cggacgacgg
       61 ataaccggtg aaaacggaaa tgcccgggcg gtgttgcctg tgcctgtttg gacaagcgtt
      121 cttgagggcg gtagaattga ggtttgcccg aaaagggcag ggcgatatgc cgcgcttgga
      181 ttttgcgcgc ggtttttcgc gttggaagca atcattgtct gtttgaatat ttaatgccgt
      241 ctgaaacgtc cggacgcgcc cccgttccct atgaaaaaac cgaccgatac cctacccgtt
      301 aatctgcaac gccgccgcct gttgtgtgcc gccggtgcgt tgttgctcag tcctctggcg
      361 cacgccggcg cgcaacgtga ggaaacgctt gccgacgatg tggcttccgt gatgaggagt
      421 tctgtcggca gcgtcaatcc gccgaggctg gtgtttgaca atccgaaaga gggcgaacgt
      481 tggttgtctg ccatgtcggc acgtttggca aggttcgtcc ccgaggagga ggagcggcgc
      541 aggctgctgg tcaatatcca gtacgaaagc agccgggccg gtttggatac gcagattgtg
      601 ttggggctga ttgaggtgga aagcgcgttc cgccagtatg caatcagcgg tgtcggcgcg
      661 cgcggcctga tgcaggttat gccgttttgg aaaaactaca tcggcaaacc ggcgcacaac
      721 ctgttcgaca tccgcaccaa cctgcgttac ggctgtacca tcctgcgcca ttaccggaat
      781 cttgaaaaag gcaacatcgt ccgcgcgctt gcccgcttta acggcagctt gggcagcaat
      841 aaatatccga acgccgtttt gggcgcgtgg cgcaaccgct ggcagtggcg ttgattttga
      901 acccgcgccg caaccgaaat acggcgaatc ctgtataatc cgaaaatctg ttcactggaa
      961 gttcagacgg cattgcaact gttgatgccg tctgaaaaaa tatgatggca agagacaacc
     1021 gcatccaaat gtttccgcac gaatggcgcg ccagtacgac gctttccggc gtgtacgcgc
     1081 tgcgtatgct gggtatgttc ctcgtgctgc ccgtattggc ggtgtatgcc gcctcgctgc
     1141 ccggcgcgga aggcaacaaa acgctggtcg ggctggcaat gggcatttac gggctgacac
     1201 aggctctgct gcaactgcct ttgggcatcg cttccgacaa gttcgggcgc aagaaaacca
     1261 tttatgtcgg gctgattgtg tttgcagcgg gcagcttcct tgccgccgcc gccgatacgc
     1321 tgcccatgct gatcgccgca cgcgccatac agggtgcggg agcggttagt gcggcggtta
     1381 ccgcgctgct ggcggatttg acgcgcgacg gcgtacgtac ccgcgcaatg gcgatgatcg
     1441 gtttgagtat cggtctgacg ttttcggtca gcctcgtcgt tgcccctgtg attgccgacg
     1501 cggtgggcgt acgcggcttg tttctgctga ccggtatttt gaccgttgcc agtatcggcg
     1561 tggtggcgtg gatgactccc gacccggagg tttccaagct gcacgaagat acgcaggcgc
     1621 agccttcgcg cataggcgaa gttttgaaaa accgtaggct gctgacgctc gatttcggca
     1681 ttttcgccct gcacgccgcg caaatggcat tgtttaccgc gctgcctttc gcgatgaccc
     1741 agctcggttt ggaaaaaata cagcattgga aagtctatct gccctcgacc attacgggct
     1801 tggtggtgat ggttccgctg attatcgtcg gcgagacgcg caacaagctc aaacaggttt
     1861 ttgttttggg tatcgtctgt attgcggcgg cgcagctcgg tttgctgtcc ggtatgcgct
     1921 cggtaggctt gattaccgct tatttggttg tttactttat cggttttaat gtgttggaag
     1981 cgagcctgcc gtctatggtt tccaaaatcg cgccgtccga cctgaagggt acggcgatgg
     2041 gcgtgtacaa cacgatgcag tcgctcggac tgtttgccgg cggcgcggca ggcggtttgc
     2101 tgtttcaaaa atacggcttt tccggcgtgt ttgccttttg cagtatattg atgctgctgt
     2161 ggctggtaat tgccgtttta tcgcctgcgc ccaagcccgt caaaaacctc agttaccctg
     2221 tcggcggcgt gtggcagggc aatcaggaag ggttataccg cgccttgtcg gagcttgagg
     2281 gtgtggaaga catcggtttc agtttcgacg ggcagaccgt ctatctcaaa gtgttgcaga
     2341 agggtttcga tcaggctgcc gctgaaaaaa tcatcacagg agtttaaaaa atgtcattga
     2401 acaaagtcat cctcatcggc cgcctcggac gcgatcccga agtgcgctat atgcccaacg
     2461 gcgaggcggt ttgtaatttc agcgtcgcca ccagcgaaac ttggaacgac cgcaacggcc
     2521 aacgtgtaga gcgtactgag tggcacaaca tcaccatgta ccgcaaactg gcggaaattg
     2581 ccgggcaata cctcaaaaaa ggcgggctgg tttatctgga aggcagaatc caaagccgca
     2641 aataccaagg caaagacggc atcgaacgca ccgcttacga tattgtcgcc aacgaaatga
     2701 aaatgttggg cgggcgcaat gaaaacagcg gcggtgcgcc ttacgaggaa ggttacggtc
     2761 agagtcagga ggcttaccaa cgccccgcgc agcaaagccg gcagcccgcc tccgacgcgc
     2821 cgtcccatcc ccaagaagca ccagccgcgc cgcgccgcca acccgtgcct gccgccgccc
     2881 cggtcgagga cattgacgac gatatcccgt tctgaatttt acggccggac atcctcgcgg
     2941 agggaaatca taaaggacgg agaaacctta aaccttacgg ggcagggttt ctcttttttg
     3001 catttgggcc ggcttgttgc cgccctttgc gttgggcgga acgttgcgat tgcgccgttc
     3061 gggcgttttg aggcagtgat gcctgccgca cgtccccgct g
//
LOCUS       DAWGKF010000195         3084 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.195, whole genome shotgun sequence.
ACCESSION   DAWGKF010000195 DAWGKF010000000
VERSION     DAWGKF010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3084)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3084)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3084
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.195"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..260)
                     /locus_tag="WHR07_001926"
     CDS             complement(<1..260)
                     /locus_tag="WHR07_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131092.1"
                     /translation="MNMENYFSNLNLDIRTHKLGTFTDQKVTPDVLCAVAECIIEYIE
                     NIGEIFSINDIRYSDYAEYIATAVFKKPSIENAGSEYNKFFS"
     gene            complement(272..2860)
                     /gene="dcm"
                     /locus_tag="WHR07_001927"
     CDS             complement(272..2860)
                     /gene="dcm"
                     /locus_tag="WHR07_001927"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ2131093.1"
                     /translation="MKNQYSKSLHGVFYLAFYDKIHAFFAEQLFQLIINMNKKPTYIS
                     LFSSAGVGCYGFKTNGFECVATNELLEKRLKIQKYNQKCRFDSGYIAGDITLPETQAK
                     LFAEIRRWNTEIDVVIATPPCQGMSVANHKKNNEMARNSLVVESIKIVREVQPKFFIF
                     ENVKAFLKTPCTDTDYQEKPIEEAIWSNLGGHYNILSNVLNFKDYGANSSRTRTLVIG
                     VRKDIHHITPYDIFPKQTPPKTLRTLLADLPPLMQMGEISDDDIYHSYREFDRRMLPW
                     IAQLKEGESAFQNTDSARIPHQIKNGEIIYNQNKNGDKYARWFLDREGPCIHTRNDIL
                     ASQNTIHPTENRVFSVRELMRMMSIPPSFKWTAQDEKQLNALSFDEKKTFLKKEELNI
                     RHCIGESVPTAVLANVAQNIQAALQQSELSMTEIQNLIKRENLSLADNLYRFIEQHFD
                     AYPFSRLLQIAEYANAARSETAAYFTRIDIAFGLVNALPDFKKKKNLRILEPSVGIGN
                     FIPLLAKKYADKEKVIFDLVDIDSNSLNLLSLLLKKLNLGSKFEFNIIHQDFLTATLP
                     ENYDLVIGNPPYGKVKASDKNLALYRKNATNKDTQNIFSFFIDKALTLSKTVALVVPK
                     SVINAPEFQITRQQLITANINRIIDYGEKAFKGVKIETIAFIADQTDKDNQHITIESH
                     IQETLIQNCKNYFFSDNFPYWLIYRNSEFDQIAQKLEFNVFQSFRDRQITKAHTQNSG
                     NVRVLKSRNIGNNEIIDIEGYDSYVDSVAPFSVGKFINRKNVVMIPNLTYKPRAAFLP
                     ENSIADGSVALLTMKKHEKILTQRDLAYYATPEFEQFYRVARNYGSRSMNIDNHSVFF
                     FGLLKD"
BASE COUNT          899 a          570 c          607 g         1008 t
ORIGIN      
        1 tgtgaaaaaa atttattgta ttcgctaccg gcattttcaa tggatggttt tttaaatacg
       61 gcggtggcga tatattcggc ataatctgaa taacgaatat cgttaatgct aaatatttct
      121 ccaatatttt caatatattc gatgatacat tctgctacgg cacataatac atccggggtt
      181 actttttgat cggtaaatgt gccgagttta tgtgttctga tgtctaaatt taagttagaa
      241 aaataatttt ccatattcat tttttactcc tctaatcttt tagcaatccg aaaaaaaaca
      301 cagaatgatt gtctatattc attgaacgag aaccataatt acgggcaaca cggtaaaact
      361 gctcaaattc gggagttgca tagtatgcga gatctcgttg ggttaggatt ttttcgtgtt
      421 ttttcattgt cagtagggca accgagccat cagcaatact gttttcaggc aaaaatgctg
      481 cccgaggttt gtaagtcaga ttgggaatca tcacgacatt tttacggtta ataaatttgc
      541 cgacagaaaa aggggcaact gaatccacat aactatcata accctcaata tcaataatct
      601 cgttgttacc gatattacgg gattttaaaa cccgaacatt gccactattc tgtgtatgcg
      661 ctttggtaat ttggcgatct cggaatgatt gaaatacatt aaattccaat ttttgtgcaa
      721 tttgatcaaa ttcactatta cgataaatca accaataggg aaaattatca gaaaaaaaat
      781 agtttttaca gttttgtatc aacgtttctt ggatatggct ttctatcgta atatgttgat
      841 tgtctttgtc ggtttgatcg gcaataaagg caatcgtctc tatttttacg cctttaaatg
      901 ctttctcgcc gtaatcaata atgcggttga tattggctgt gataagttgt tgtcgggtta
      961 tttgaaactc gggggcgtta atcacacttt tgggaacaac caaagccacg gttttactga
     1021 gcgtcagagc cttatcaata aaaaatgaaa aaatattttg cgtatcttta ttggtagcat
     1081 ttttacggta tagtgccaaa tttttatcac ttgccttaac tttgccgtat ggtggattgc
     1141 cgatgactag atcatagttt tcaggcagcg ttgcggttaa aaaatcctga tgaataatat
     1201 tgaactcaaa tttactgcct aaatttaatt ttttcagcag caatgacagg agatttaaac
     1261 tgtttgagtc aatatccacc aaatcaaaaa taactttttc tttgtctgca tatttttttg
     1321 ccagtagtgg aatgaaatta ccaatgccga cagagggttc taaaatccgt aagttttttt
     1381 tctttttgaa atcaggaaga gcattaacca gtccgaaagc aatatcaata cgggtaaaat
     1441 aagcagccgt ttcgctacgg gcagcattag cgtattcagc aatttgcaaa agccgactga
     1501 atggatatgc gtcaaaatgt tgctcaataa atcggtagag attatcggca agggataaat
     1561 tttctcgttt gattaaattt tgaatttccg tcattgacag ttcggactgt tgcaaggctg
     1621 cctgaatgtt ttgtgcgaca ttggccaaaa cagcggttgg cacagattca ccgatacaat
     1681 ggcggatatt cagctcttct tttttcaaaa aggttttttt ctcatcaaat gacagtgcat
     1741 taagctgttt ttcatcttgt gccgtccatt taaatgatgg cggaattgac atcatacgca
     1801 tgagttcacg cacggaaaat acacggtttt cagtgggatg gatggtgttt tggctggcta
     1861 aaatgtcatt acgggtatgg atgcacggac cctcacgatc taaaaaccaa cgggcgtatt
     1921 tgtctccatt tttgttttga ttgtagataa tttcaccatt tttaatttga tggggaatgc
     1981 gtgcagaatc agtattttgg aaagctgact cgccttcttt aagctgtgca atccacggca
     2041 acatacggcg atcaaattca cgatagctat ggtaaatatc atcatcgcta atttcgccca
     2101 tttgcattaa aggcggcaga tcagccagca atgtacgcaa ggtttttggc ggtgtttgct
     2161 tggggaaaat atcgtacggc gtaatgtgat gaatatcttt tcgcacgcca atcaccagcg
     2221 ttctggtacg actggaattt gcaccataat ctttaaaatt tagtacattg gatagaatgt
     2281 tgtaatgtcc gcccaaattt gaccaaatgg cttcctcaat cggcttttct tgataatcgg
     2341 tatcggtgca gggtgttttt aaaaaggctt tgacgttttc aaaaataaaa aacttgggct
     2401 gaacttcccg aacgattttg attgattcca cgaccaaaga atttcttgcc atttcattat
     2461 tttttttatg gttggcaacc gacattcctt ggcaaggcgg tgtggcaatc acaacatcaa
     2521 tttcagtatt ccagcgtcga atttcggcaa acaatttggc ttgggtttca ggcagggtaa
     2581 tatcgccggc aatataacct gaatcaaagc ggcatttttg attatatttt tggattttta
     2641 ggcgtttttc taaaagttcg ttggttgcta cgcattcaaa accattggtt ttaaaaccat
     2701 agcaaccaac gcctgcactg ctaaataaac tgatgtaggt gggttttttg ttcatattta
     2761 tgatgagttg aaacaactgc tctgcaaaaa atgcgtgtat tttatcatag aaggcaaggt
     2821 aaaacacgcc atgcaatgat ttactatatt gatttttcat caaaaaagtg ctgtttgaac
     2881 agatatacag cggtgttttt tgcaatgcgt ttcaaacttg aggtacgttt ttaatagaaa
     2941 caccgtctga acgccaacct gagacctttg caaaattccc acaaatcccc caattcccac
     3001 caagacattt aggggatttc tcatgagcac tttcttccgg caaaccgccc aagccatgat
     3061 tgccaaacac atcgaccgct tccc
//
LOCUS       DAWGKF010000196         2967 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.196, whole genome shotgun sequence.
ACCESSION   DAWGKF010000196 DAWGKF010000000
VERSION     DAWGKF010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2967)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2967)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2967
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.196"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            121..1665
                     /gene="purF"
                     /locus_tag="WHR07_001928"
     CDS             121..1665
                     /gene="purF"
                     /locus_tag="WHR07_001928"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEZ2131094.1"
                     /translation="MCGVLGLVSHEPVNQLLYDGLQMLQHRGQDAAGIVTAEGGTFHM
                     HKGKGMVREVFRTRNMRDLTGNAGIAHVRYPTAGNAGSSAEAQPFYVSSPFGIVLAHN
                     GNLTNTAELYENVCNKHLRHVNTSSDSEVLLNVFAHELRREVSKNADPHRLNADNIFN
                     AVAEVHRLVRGAYGVVAMIAGYGMLAFRDPYGIRPLVLGSQTDSEGRKSYAVASESVA
                     FNALTYDLERDIRPGEAVFVGFDGTMIARQCSDRAKLSPCLFEYVYFARPDSVIDGVS
                     VYQSRLDMGVSLAEKIKRELPVDGIDVVMPIPDTSRPSAMELAVHLDKPYREGLIKNR
                     YIGRTFIMPGQATRKKSVRQKLSPMETEFAGKSVLLVDDSIVRGTTSREIVEMVRAAG
                     ARKVYIASAAPEVRYPNVYGIDMPTREELIANERSAAEIAAEIGADGIVFQNLSDLEA
                     VVKALNPKIESFDSSCFNGIYQTGDIDDAYLDRLSAEKSGCGGLKIHPSRMEHSISIS
                     DAGDEE"
     gene            1765..2256
                     /gene="greB"
                     /locus_tag="WHR07_001929"
     CDS             1765..2256
                     /gene="greB"
                     /locus_tag="WHR07_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HEZ2131095.1"
                     /translation="MSTETKNYITPAGWQALKDELYQLVNKERPEIVQIVNWAAGNGD
                     RSENGDYLYGKRRMREIDRRIRFLTKRLESAVVVDPELREATDQVFFGATVGLLRGDG
                     REQTVKIVGIDEIDTAQNKISWISPLARCLIKAREGDEVVLNTPEGREEIEILSVEYI
                     KID"
     gene            2315..2941
                     /locus_tag="WHR07_001930"
     CDS             2315..2941
                     /locus_tag="WHR07_001930"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HEZ2131096.1"
                     /translation="MRKIRTKICGITTPEDASAAVAAGADAVGLVFFQGSSRAVDIAR
                     AKKITAALPPFVSVVALFVNESAQNIRRILAEVPIHIIQFHGDEDDTFCRQFDRPYIK
                     AIRVQTASDIRNAADRFPDAQALLFDAYHPSEYGGTGHRFDWTLLAEYSGKPWVLAGG
                     LTPENVGEAVRITGAEAVDVSGGVEASKGKKDPAKVAAFIATANRLSR"
BASE COUNT          713 a          908 c          775 g          571 t
ORIGIN      
        1 tattctccat aaacccacct atctgtcctt cgctcaaata ttgtcaacaa ttcaggcaaa
       61 aaaccaccgt ttgctttata attccgtttt acccttaaac ctcgaatcgg agaagacgat
      121 atgtgcggcg tattaggttt ggtcagtcat gaacccgtga accagcttct gtacgacggt
      181 ttgcagatgt tgcagcacag gggacaggat gcggcgggca ttgtaacggc cgaaggcggt
      241 accttccata tgcacaaagg caaagggatg gtgcgcgaag tgttccgcac gcgcaatatg
      301 cgtgatttga ccggcaacgc cggcatcgcc cacgtccgtt atcccacggc gggcaacgcc
      361 ggcagcagcg cggaggcgca gcctttctac gtcagctcgc cgttcggcat cgttttggcg
      421 cacaacggca acctcaccaa cactgccgaa ctttatgaaa acgtgtgcaa caaacaccta
      481 cgccacgtca acaccagctc cgattccgaa gtcttgctca acgtattcgc gcacgaattg
      541 cgccgcgaag tctctaaaaa cgccgacccg caccggctca atgccgacaa tattttcaac
      601 gccgttgccg aagtccaccg cctggtgcgc ggcgcatacg gcgtggttgc catgattgcg
      661 ggctacggta tgcttgcctt ccgcgaccct tacggcatcc gcccgctggt attgggttcg
      721 caaaccgaca gcgaaggcag aaaatcctat gccgtcgcct ccgaatccgt cgccttcaac
      781 gcgcttacct acgatttgga acgcgacatc cggccgggcg aagcggtatt tgtcggcttt
      841 gacggcacaa tgattgcccg ccaatgcagc gaccgtgcca aactcagccc ctgccttttt
      901 gaatatgttt attttgcccg ccccgactct gtgattgacg gcgtatccgt ttaccaatcg
      961 cgcttggata tgggcgtgtc gctggcggaa aaaatcaaac gcgagctgcc cgtggacggc
     1021 atcgatgtcg tgatgcccat ccccgacacc agccgcccca gcgcgatgga gcttgccgtc
     1081 catctcgaca aaccctaccg cgagggtttg attaaaaacc gctatatcgg ccgcaccttt
     1141 attatgcccg gacaggcgac gcgcaaaaaa tccgtgcgcc aaaaactcag cccgatggaa
     1201 accgaatttg caggcaaaag cgtgttgctg gtggacgact ccatcgtgcg cgggacgacc
     1261 agccgcgaaa tcgtcgaaat ggtacgcgcg gcgggcgcgc gcaaagtcta tatcgcctcc
     1321 gccgcgcccg aagtgcgcta tcccaatgtg tacggcattg atatgcccac gcgcgaagag
     1381 ttgattgcca acgagcgcag cgcggcggaa atcgccgccg aaatcggcgc agacggcatc
     1441 gtgttccaaa atttgagcga tttggaagcc gtcgtcaaag cactcaatcc gaaaatcgaa
     1501 tccttcgatt cgtcctgttt caacggcatt tatcagaccg gcgacatcga tgatgcctac
     1561 ctcgaccgcc tgtctgccga gaaatccggc tgcggcggtc tgaaaatcca cccgagcagg
     1621 atggaacaca gcatcagcat cagcgatgcg ggcgacgaag aataaggctt cccaaaccgc
     1681 gatgccgtct gaaatccgaa cgccgggttt tcagacggca tttcccatat cggcatcaca
     1741 tttcccgttt catccgcaca caatatgagt accgaaacca aaaactacat tacgcccgcc
     1801 ggatggcagg cattgaaaga cgagctttat caactggtca acaaagaacg ccccgaaatc
     1861 gtccaaatcg tcaactgggc ggcaggcaac ggcgaccgca gcgaaaacgg cgactatctt
     1921 tacggcaaac gccgtatgcg cgaaatcgac cgccgcatcc gtttcctgac caagcgtttg
     1981 gagtccgccg tcgtcgtcga tcccgaattg cgcgaagcga ccgaccaagt atttttcggc
     2041 gcgaccgtcg gcctgttgcg cggcgacggg cgcgagcaaa ccgtcaaaat cgtcggcatc
     2101 gatgaaatcg ataccgcgca aaacaaaatt tcttggattt cgccgttggc gcgttgcctg
     2161 attaaagcgc gcgaaggcga cgaagtggtt ttgaacacgc cggaagggcg tgaggaaatt
     2221 gaaatccttt ctgtcgaata catcaaaatc gactgatcgg gaatgccgtc tgaaacggtg
     2281 caaacgcatc gtttcccaaa taaaggaata ccgaatgagg aaaatccgca ccaaaatctg
     2341 cggcatcacc acaccggaag acgcatcggc cgccgtagcg gcaggtgcag atgccgtcgg
     2401 gctggtcttt ttccaaggca gcagccgggc cgtcgatatt gcccgcgcca aaaaaatcac
     2461 cgccgcactg ccgccgtttg tcagcgttgt cgcccttttc gtcaacgaaa gcgcgcaaaa
     2521 catccgccgc atccttgccg aagtgccgat acacatcatc caattccacg gcgacgaaga
     2581 cgacacattc tgccgccagt tcgaccgccc ctatatcaag gccattcgtg ttcagacggc
     2641 atcagacatc cgaaacgccg ccgaccgctt ccccgacgct caggcactgc tgttcgatgc
     2701 ctaccaccct tcggaatacg gcggcaccgg acaccgcttc gactggacgc tgctggcgga
     2761 atattcgggc aaaccgtggg tgcttgccgg cgggctgacc cctgaaaacg tcggcgaagc
     2821 cgtccgcatc accggagcgg aagcggtcga tgtatccggc ggcgtggaag cgtctaaagg
     2881 caaaaaagac ccagccaaag tcgccgcctt tatcgcaacc gccaaccgcc tatcccgtta
     2941 aagcaacaaa aattgccgcc ggaatga
//
LOCUS       DAWGKF010000197         2919 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.197, whole genome shotgun sequence.
ACCESSION   DAWGKF010000197 DAWGKF010000000
VERSION     DAWGKF010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2919)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2919)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2919
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.197"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..425
                     /locus_tag="WHR07_001931"
     CDS             <1..425
                     /locus_tag="WHR07_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HEZ2131097.1"
                     /translation="VAEAAGTVWGGKKVELNPTKWDWVKNTDYKTPAARPMQTLDGEM
                     AGGNKPVVKSIRPTTRDELRQALQEQGFRRTGSDAAQYETWKGPDGVKIDIRPNGEVI
                     RTQRVPRTDGVQGKYPQRQDYEGNPLPNNHHHSGYFVK"
     gene            422..739
                     /locus_tag="WHR07_001932"
     CDS             422..739
                     /locus_tag="WHR07_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131098.1"
                     /translation="MKKNIFHNVSLYEIIFSDNGNTLTLSFTDTIEGNYFGYIKCSNI
                     LNFKLDTNNFVDYEDKEDSLFPLFIPEIELYKYQFYSEIIIDVGIIIKISAETINFEP
                     LGK"
     gene            809..1477
                     /gene="mafB"
                     /locus_tag="WHR07_001933"
                     /pseudo
     CDS             809..1477
                     /gene="mafB"
                     /locus_tag="WHR07_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246532.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
     gene            1487..1693
                     /locus_tag="WHR07_001934"
     CDS             1487..1693
                     /locus_tag="WHR07_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131099.1"
                     /translation="MNILSINNQNSTISLTQDEVFVLRAILNEIYAGVCVDSREFENV
                     SGVRKHEVDNLQQQFAGIYKKMTT"
     gene            1825..2076
                     /locus_tag="WHR07_001935"
     CDS             1825..2076
                     /locus_tag="WHR07_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131100.1"
                     /translation="MDNTRIMAAREAGVKVEANVHNFNDRLSSKERIRFKHDGIEPQT
                     WGEAIQLRIRKQETQKGVPEGWSKRFPNGSIYDVKVLRK"
     gene            2073..2444
                     /locus_tag="WHR07_001936"
     CDS             2073..2444
                     /locus_tag="WHR07_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HEZ2131101.1"
                     /translation="MIKQNSFVPYPEAMLPKGFKYPQSYLKLAQSTHAINYDEQYSFP
                     WWFENAESNISEVIDIYFEITGIPNLLPFARNQEWAACFDISDKSGNPKIIVVNLDNT
                     KYYETFENFDTWLKEAENDGW"
     gene            2530..2655
                     /locus_tag="WHR07_001937"
                     /pseudo
     CDS             2530..2655
                     /locus_tag="WHR07_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951170.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
     gene            2695..>2919
                     /locus_tag="WHR07_001938"
     CDS             2695..>2919
                     /locus_tag="WHR07_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225727.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
                     /protein_id="HEZ2131102.1"
                     /translation="MNLPIQKFMMLFAAAISLLQIPISHANGLDARLRDDMQAKHYEP
                     GGKYHLFGNARGSVKKRVYAVQTFDATAVSP"
BASE COUNT         1014 a          515 c          610 g          780 t
ORIGIN      
        1 ccgtagcaga ggccgcaggt acggtttggg gcggtaaaaa agtagaactt aacccgacta
       61 aatgggattg ggttaaaaat accgattata aaacacctgc tgcccgacct atgcagactt
      121 tagatgggga aatggctggt ggaaacaagc cagttgttaa atctatcaga ccaactacgc
      181 gagatgaatt acgtcaagca ttgcaagaac aaggttttag acgtactggt tcagatgcgg
      241 ctcaatatga aacatggaaa ggtcctgatg gcgtgaaaat agatattcgt ccaaatggag
      301 aggttataag aacccaaaga gtgccgcgaa ccgatggtgt acagggaaaa tatccgcaac
      361 gacaagatta tgaaggcaat ccattgccaa ataatcatca tcattctgga tattttgtca
      421 aatgaaaaaa aatatttttc acaatgtaag cctttatgaa ataatctttt ccgataatgg
      481 aaataccctt acattatctt ttacagatac aattgaaggt aattatttcg gatatatcaa
      541 atgcagtaat attttgaatt ttaaattaga tacaaataat ttcgtagatt atgaggataa
      601 ggaagatagc ttgtttccct tgtttatacc cgaaatagag ctatataaat accaatttta
      661 tagtgaaatt attattgatg tagggattat tataaaaata tctgctgaaa caattaattt
      721 tgagccactg ggaaaatagt aactgctttc tcagcagccg tagcaactgt atttttaccc
      781 gacggggtaa aaatacagtt gctacatctc tgcgcagcag actctacaag gtattaataa
      841 tttaggaaat ttaagtccag aaacacaact tgctgccgcg agcctattac aggatagtgc
      901 ttttgcggta aaagacggca ttaattccgc cagacaatgg gctgatgccc atccgaatat
      961 aactgcaaca gcccaaactg cccttgccgt agcagaggcc gcaactacgg tttggggcgg
     1021 taaaaaagta gaacttaacc cgaccaaatg ggattgggtt aaaaataccg gctataaaaa
     1081 acctgctgcc cgccatatgc agactgtaga tggggagatg gcagggggga atagaccgcc
     1141 taaatctata acgtccaaca gcaaagcaga tgcttccaca caaccgtctt tacaagcgca
     1201 actaattgga gaacaaatta gtagtgggca tgcttataac aagcatgtca taagacaaca
     1261 agaatttacg gatttaaata tcaattcacc agcagatttt gctcggcata ttgaaaatat
     1321 tgttagccat ccaacaaata tgaaagagtt acctcgcggt agaactgcgt attgggatga
     1381 taaaacaggg acaatagtta tccgagataa aaattctgac gatggaggta cagcatttag
     1441 accaacatca ggtaaaaaat attatgatga tttataggaa aaagccatga atatactatc
     1501 cataaataat caaaactcaa ctatttcact aactcaagat gaagtttttg ttttacgagc
     1561 tatcttgaat gagatatatg cgggcgtatg tgtagattca agagaatttg aaaatgtatc
     1621 tggtgttaga aaacatgaag tagataattt acaacaacag tttgctggaa tttataaaaa
     1681 aatgacaact taacaaccca aatttttgtc agagcctagt gcaaattaca actatgattc
     1741 tattgtagcc gaaatgaaag aaaaaaatca tgggttggcg acagggttga tgttgttaat
     1801 atgcctgatg gagcacctac tagtatggat aacacgcgta ttatggcagc acgtgaagca
     1861 ggggtaaaag tggaagcgaa tgttcataat tttaatgacc gattatcatc aaaagagaga
     1921 atcaggttta agcatgatgg tattgagcct caaacttggg gagaagctat ccagctacga
     1981 attagaaagc aagaaacaca aaaaggagtt ccagaagggt ggagcaaaag atttcctaac
     2041 ggaagtattt atgatgtaaa ggtacttagg aaatgataaa acaaaatagt tttgttccgt
     2101 atcctgaagc aatgcttcct aaaggattta aatatccgca aagttattta aaattagctc
     2161 aatccactca tgccattaac tacgatgaac aatattcttt tccttggtgg tttgaaaatg
     2221 cagaaagcaa tatatcagaa gtaattgaca tttattttga aataactggc attccaaacc
     2281 tattaccttt tgctagaaac caagagtggg ctgcctgttt tgatatttca gataaatcag
     2341 gtaatcctaa aattatagta gttaatttag ataatacaaa atattacgag acttttgaaa
     2401 attttgatac ttggctaaaa gaagctgaaa atgatggttg gtagcagccg taggtcggat
     2461 tctcgaatcc gacattttcc aacagcggca tttcggaaac gatagacgcg tcaaatattt
     2521 ttgtcggata caagtatccg accatacggc aatcatacgg gtaactctgc cccatccgta
     2581 gaggctgata acagtcatga ggggtatgga tacagcgatg aagtagtgcg acaacataga
     2641 caaggacaac cttgattcac actaccataa ccgcttgcta ccaaggaaaa caaaatgaat
     2701 ttgcctattc aaaaattcat gatgctgttt gcagcagcaa tatcgttgct gcaaatcccc
     2761 attagtcatg cgaacggttt ggatgcccgt ttgcgcgatg atatgcaggc aaaacactac
     2821 gaaccgggtg gtaaatacca tctgtttggt aatgctcgcg gcagtgttaa aaagcgggtt
     2881 tacgccgtcc agacatttga tgcaactgcg gtcagtcct
//
LOCUS       DAWGKF010000198         2822 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.198, whole genome shotgun sequence.
ACCESSION   DAWGKF010000198 DAWGKF010000000
VERSION     DAWGKF010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2822)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2822)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2822
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.198"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(36..512)
                     /gene="greA"
                     /locus_tag="WHR07_001939"
     CDS             complement(36..512)
                     /gene="greA"
                     /locus_tag="WHR07_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HEZ2131103.1"
                     /translation="MQKIPLTVRGAELLKQELQQLKSVARPEVIEAIAEARSHGDLSE
                     NAEYEAAKERQGFIEGRISELEHKLSVAHIINPTEIHAEGKIVFGTTVTLEDLETEEH
                     VTYQIVGEDEADIKQGKIYVGSPIARALIGKEEGDTAEVQAPGGVREYDIIEVRYI"
     gene            907..2208
                     /gene="aroA"
                     /locus_tag="WHR07_001940"
     CDS             907..2208
                     /gene="aroA"
                     /locus_tag="WHR07_001940"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HEZ2131104.1"
                     /translation="MTESVRLPVARLKPSTVALPGSKSISNRTLLLAALSDNACEIHS
                     LLKSDDTDRMLEALDKLGVQIEYLAEDRLKVHGTGGRFPNRTADLFLGNAGTAFRPLT
                     AALAVLGGDYHLHGVPRMHERPIGDLADALRIAGADVEYLGKEHYPPLHIGKRQDNGE
                     RVIPIKGNVSSQFLTALLMALPLTGQAFEIRMVGELISKPYIDITLKLMAQFGVQVAN
                     ENYRVFKIPADAHYHAPEHLHVEGDASSASYFLAAGLIAATPVRVTGIGANSIQGDVA
                     FARELEKIGADVVWGENFVEVSRPKERAVQSFDLDANHIPDAAMTLAIVALATGQTCT
                     LRNIGSWRVKETDRIAAMANELRKLGAKVVEEAEAIHITPPKTLTPDAVIDTYDDHRM
                     AMCFSLVSLLGVPVVINDPKCTHKTFPTYFDVFSSLTETTE"
     gene            complement(2251..2784)
                     /locus_tag="WHR07_001941"
     CDS             complement(2251..2784)
                     /locus_tag="WHR07_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEZ2131105.1"
                     /translation="MFPPDKTLFLCLSALLLASCGTTSGKHRQPKPKQTVRQIQAVRI
                     SHIDRTQGSQELMLHSLGLIGTPYKWGGSSTATGFDCSGMIQFVYKNALNVKLPRTAR
                     DMAAASRKIPDSRLKAGDLVFFNTGGTHRYSHVGLYIGNGEFIHAPSSGKTIKTEKLS
                     TPFYAKNYLGAHTFFTE"
BASE COUNT          591 a          776 c          772 g          683 t
ORIGIN      
        1 cctgcgtgtg tcgggtgtat cgaaatcaag ccgaatcaaa tatatcggac ttcgataatg
       61 tcgtattcgc gcacgccgcc cggggcttgg acttccgccg tatcgccctc ttccttgccg
      121 attaaggcgc gggcaatcgg tgagccgaca tagattttgc cctgtttgat gtcggcttcg
      181 tcttcgccga caatttgata ggtaacgtgt tcttccgttt ccaaatcttc cagcgtaacc
      241 gtcgtaccga acacgatttt gccttcggcg tggatttcgg tcggattgat gatgtgggca
      301 acggaaagtt tgtgttccag ctcggaaatg cggccctcga taaagccttg gcgttctttg
      361 gcggcttcgt attcggcgtt ttcggacaaa tcgccgtgcg aacgggcttc ggcaatcgct
      421 tcgatcactt cgggacgcgc cacgcttttg agctgctgca attcctgttt cagcaattcc
      481 gcaccgcgta cggtcagggg gattttttgc atcggtcttt tttctccata ttccggcaca
      541 ccgttttgcg gcagcaagca taccgcgtac cgtcttgttt tgtgcgtccg gatattaaaa
      601 taaaaataca agccgcccgg aaaatcggcg gcttgtctgt cgttgaacag cggctattct
      661 accaaattct atgaaattgg caatcgtgcc gtgccgccga caaacgcgcc atgtccgcaa
      721 caaaagctga aaatatgccg tcaaagaaat tttagaaaca aaaaatttaa aaataatcaa
      781 ttttcggcat aaaaaaccac atttacggac tttaaaaccg aaaatgccaa gcctgagatt
      841 tttcatacag catttgcacc agtataatgc aggctgtttt tatctttata atattgacgt
      901 tttgccatga ccgaatccgt ccgcctcccc gtcgcccgtc tcaaaccttc caccgtcgcc
      961 ctgcccggct ccaaaagcat cagcaaccgc accctgctgc ttgccgcctt gtccgacaat
     1021 gcttgcgaaa tccattccct gctcaaatcc gacgataccg accgtatgct cgaagcactc
     1081 gataaactcg gcgttcaaat cgaatatctt gccgaagacc gtctgaaagt gcacggcaca
     1141 ggcggacgct tccccaaccg cactgccgat ttgtttttgg gcaacgcggg cacggcgttc
     1201 cgtccgctga ctgccgcact tgccgttttg ggcggcgatt atcatctgca cggcgtgcct
     1261 cgtatgcacg aacgccccat cggcgatttg gccgatgcgc tgcggattgc cggcgccgat
     1321 gtcgaatatc tcggcaagga acactatccg ccgcttcata tcggcaaacg tcaagacaac
     1381 ggcgaacgcg tgattccgat taaaggcaat gtgtccagcc agtttctgac cgccctttta
     1441 atggcgttgc cgctgaccgg gcaggcgttt gaaatccgta tggtcggcga attgatttcc
     1501 aagccctata tcgacattac tttaaaactg atggcgcaat tcggcgtaca ggttgccaat
     1561 gaaaactacc gcgtcttcaa aattcccgcc gatgcgcact accacgcgcc cgaacacttg
     1621 cacgtcgaag gcgatgcctc cagcgcgtcc tacttcctcg cagccggttt gattgctgcc
     1681 acgcccgtgc gcgtgaccgg catcggcgca aacagcatac agggcgatgt cgcctttgcc
     1741 cgcgagctgg aaaaaatcgg ggcggacgtg gtttggggcg aaaacttcgt cgaagtttca
     1801 cgcccgaagg aacgtgccgt ccaatccttt gatttggatg cgaaccatat ccccgatgcc
     1861 gccatgaccc tcgccatcgt cgcgcttgct acagggcaaa cctgcacgct gcgcaacatc
     1921 ggttcgtggc gcgtcaaaga aaccgaccgc atcgccgcga tggcaaacga gttgcgcaaa
     1981 ctcggggcaa aagtcgtcga agaagccgaa gcaattcaca tcaccccgcc caaaacgctg
     2041 acacccgacg ccgtcatcga cacgtacgac gaccaccgca tggcgatgtg tttctcgctg
     2101 gtttcgctgt tgggcgtacc cgtcgtcatc aacgatccga aatgcaccca taaaaccttc
     2161 ccgacttatt tcgacgtgtt ctcttcactg accgaaacaa cggaataagg cggcattttg
     2221 ccgcgattcc ggcgcggcgc ggcgggcggc tcattctgta aagaaagtat gtgcgccgag
     2281 gtagtttttg gcgtaaaacg gtgtggagag tttttcggtt ttgatggttt tgccgctgct
     2341 gggggcatgg atgaattcgc cgttgccgat atagagtccg acgtgtgagt agcggtgtgt
     2401 gccgccggtg ttgaagaata cgaggtcgcc ggccttaagg cggctgtcgg ggattttgcg
     2461 gcttgccgcc gccatgtcgc gggcggtgcg cggcagcttg acgttgaggg cgtttttgta
     2521 aacgaattga atcatgccgc tgcaatcgaa gccggttgcg gtgctgctgc cgccccattt
     2581 gtagggcgtg ccgatgagtc cgaggctgtg gagcatgagt tcctgcgagc cttgtgtgcg
     2641 gtcgatgtgg ctgatgcgga cggcttggat ttgccggact gtctgtttgg gtttcggttg
     2701 gcggtgtttg ccggaggtcg tgccgcatga ggcgaggagc agtgcgctga gacagaggaa
     2761 aagggttttg tcggggggaa acatggtttt tcctttgcgg gttcggatat ccgtctgaag
     2821 gt
//
LOCUS       DAWGKF010000199         2578 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.199, whole genome shotgun sequence.
ACCESSION   DAWGKF010000199 DAWGKF010000000
VERSION     DAWGKF010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2578)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2578)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2578
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.199"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            74..703
                     /locus_tag="WHR07_001942"
     CDS             74..703
                     /locus_tag="WHR07_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CadD family cadmium resistance transporter"
                     /protein_id="HEZ2131106.1"
                     /translation="MIQNVVTSIILYSGTAVDLLIILMLFFAKRKSRKDIINIYLGQF
                     LGSVSLILLSLLFAFVLDYIPSKEILGLLGLIPIFLGIKVLLLGDSDGEAIAKEGLRK
                     DNKNLIFLVAMITFASCGADNIGVFVPYFTTLNLANLIVALLTFLVMIYLLVFSAQKL
                     AQVPSVGETLEKYSRWFVAVVYLGLGVYILIENNSFDMLWTVSGQEKIL"
     gene            849..2510
                     /locus_tag="WHR07_001943"
     CDS             849..2510
                     /locus_tag="WHR07_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEZ2131107.1"
                     /translation="MLTYTPPDARPPAKTHEKPWLLLLMAFAWLWPGVFSHDLWNPAE
                     PAVYTAVEALAGSPTPLVAHLFGQTDFGIPPVYLWVAAAFKHLLSPWAADPYDAARFA
                     GVFFAVVGLTSCGFAGFNFLGRHHGRSVVLILIGCIGLIPVAHFLNPTAAAFAAAGLV
                     LHGYSLARRRVIAASFLLGTGWTLMSLAAAYPAAFALMLPLPVLMFFRPWQSRRLMLT
                     AVASLAFALPLMTVYPLLLAKTQPALFAQWLDDHVFGTFGGVRHVQTAFSLFYYLKNL
                     LWFALPALPLAVWTVCRTRLFSTDWGILGVVWMLAVLVLLAVNPQRFQDNLVWLLPPL
                     ALFGAAQLDSLRRGAAAFVNWFGIMAFGLFAVFLWTGFFAMNYGWPAKLAERAAYFSP
                     YYVPDIDPIPMAVAVLFTPLWLWAITRKNIRGRQAVTNWAAGVTLTWALLMTLFLPWL
                     DAAKSHAPVVRSMEASLSPELKRELSDGIECIDIGGGDLHTRIVWTQYGTLPHRVGDV
                     QCRYRIVRLPQNADASQGWQTVWQGARPRNKDSKFALIRKIGENI"
BASE COUNT          506 a          659 c          670 g          743 t
ORIGIN      
        1 cggggttgaa gttgacatct acaaagttta atgtttgaat acattaaaaa aatatatttg
       61 aatgagatgt tttatgattc aaaatgttgt tacttcaata atcctgtatt ctgggacagc
      121 cgtagactta cttattatcc taatgttatt ttttgccaaa agaaaaagca gaaaagacat
      181 cattaacatc tatttaggac aatttctagg ctctgttagc ctgatattgc taagtttgct
      241 ttttgcattt gtcttagatt atattcctag taaagagatt ttaggtttgc tcggcttgat
      301 tccaattttc ctaggcatca aagttttgct gttaggagat tctgatggag aggctattgc
      361 caaagagggt ttgcgcaaag ataataaaaa cctgattttt ctagtcgcta tgattacttt
      421 tgcaagttgt ggtgctgaca atattggtgt ctttgtccca tattttacta ccttaaattt
      481 agcgaatttg atagtggctt tacttacctt tctagtcatg atttatctct tggttttttc
      541 tgcccaaaaa ttagcacaag tcccttctgt tggagaaact ttggaaaaat atagcagatg
      601 gtttgttgct gttgtttatt taggattggg ggtatatatc ctgattgaaa acaacagttt
      661 tgatatgcta tggactgtgt cgggccagga aaaaatatta tgaaaaagat agtatctgca
      721 aagactgcca tgtgcagtct tttttgttgc cggtcttttt gtgtctgatg ccgtctgaag
      781 cagtctctgc acgacctttg tgcgaatatt tgctacactt ggcaatccgt ccatttcttc
      841 tcacgcttat gctgacctac actccgcccg atgcccgccc gcccgccaaa acccacgaaa
      901 agccgtggct gctgctgttg atggcgtttg cctggttgtg gcccggcgtg ttttcccacg
      961 atttgtggaa tcctgccgaa cctgccgtct ataccgccgt cgaagcactg gcaggcagcc
     1021 ccaccccttt ggttgcccat ctgttcggtc aaaccgattt cggcataccg cccgtgtatc
     1081 tttgggttgc cgccgcgttc aaacatttgc tgtcgccgtg ggcagccgac ccgtatgatg
     1141 ccgcacgctt tgccggcgtg tttttcgccg ttgtcggact gacttcctgc ggctttgccg
     1201 gtttcaactt tttgggcaga caccacgggc gcagcgtcgt cctgattctc atcggctgta
     1261 tcgggctgat tccagttgcc catttcctca accccactgc cgccgccttt gccgccgccg
     1321 gactggtgct gcacggttat tctttggctc gccggcgcgt gattgccgcc tcttttctgc
     1381 tcggtacggg ctggacgctg atgtcgttgg cagcagctta tccggcagca tttgccctga
     1441 tgctgccctt gcccgtactg atgtttttcc gtccgtggca aagcaggcgt ttgatgttga
     1501 cggcagtcgc ctcacttgcc tttgccctgc cgcttatgac cgtttacccg ctgctcttgg
     1561 caaaaacgca gcccgcgctg ttcgcgcaat ggctcgacga tcacgttttc ggtacgttcg
     1621 gcggcgtgcg gcacgttcag acggcattca gtttgtttta ctatctgaaa aacctgcttt
     1681 ggtttgcact gcccgcgctg ccgctggcgg tttggacggt ttgccgcacg cgcctgtttt
     1741 cgaccgactg ggggattttg ggcgtcgtct ggatgcttgc cgttttggtg ctgcttgccg
     1801 tcaatccgca gcgttttcag gataacctcg tctggctgct tccgccgctt gccctgttcg
     1861 gcgcggcgca actggacagc ctgaggcgcg gcgcggcggc gtttgtcaac tggttcggca
     1921 ttatggcgtt cggactgttt gccgtgttcc tgtggacggg ctttttcgcc atgaattacg
     1981 gctggcccgc caagcttgcc gaacgcgccg cctacttcag cccgtattac gttcccgaca
     2041 tcgatcccat tccgatggcg gttgccgtac tgttcacacc cttgtggctg tgggcgatta
     2101 cccgcaaaaa catacgcggc aggcaggcgg ttaccaactg ggcggcaggc gttaccctga
     2161 cctgggcttt gctgatgacg ctgttcctgc cgtggctgga cgcggcgaaa agccacgcgc
     2221 cggtcgtccg gagtatggag gcatcgcttt ccccggaatt aaaacgggag ctttcagacg
     2281 gcatcgagtg tatcgacata ggcggcggcg acctgcacac gcggattgtt tggacgcagt
     2341 acggcacatt gccgcaccgc gtcggcgatg tacaatgccg ctaccgtatc gtccgcttgc
     2401 cccaaaatgc ggatgcgtcg caaggctggc agacggtttg gcagggtgcg cgcccgcgca
     2461 acaaagacag taagttcgca ctgatacgga aaatcgggga aaatatataa aaaacaacag
     2521 attgagccga atttctggat taagtgccgg aaatcgcgta taattgcgcg attaaacc
//
LOCUS       DAWGKF010000200         2557 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.200, whole genome shotgun sequence.
ACCESSION   DAWGKF010000200 DAWGKF010000000
VERSION     DAWGKF010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2557)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2557)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2557
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.200"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            67..846
                     /locus_tag="WHR07_001944"
     CDS             67..846
                     /locus_tag="WHR07_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HEZ2131108.1"
                     /translation="MAASPEAKFTEEKILWVKHHTPKLITFAISRPESYRFKAGQFSR
                     LGFYEGEGFIWRAYSIVSAEYADTLEYFAVLIQDGPMSARFAKMQQGDTILLDKNATG
                     FLLPERFPDGKDLVMLCTGSGIAPFLSILEQPEIRQRFDTVNLIHSVSFPEELIFNDR
                     LAALTEHPLVGEYGHSFRFLPVTTRAANPSGLSGKRIPELLKNNSIEQALHTKFTPES
                     TRFMICGNPDMVKDTFQTLLDMGYAMHRNRIPGQIMMENGF"
     gene            complement(1056..2468)
                     /locus_tag="WHR07_001945"
     CDS             complement(1056..2468)
                     /locus_tag="WHR07_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEZ2131109.1"
                     /translation="MLFEFKENKMIVASRWPLLEKVFLRFGMPVAVVDLESTGGNLYE
                     DRVTEVALVKFEQGRVVRHEWLVNPQKPIPQFVVGLTGISDGMVADAPVFAEIAGELF
                     SVLKGCVLVAHNSRFDYTFLKHEFHRVGIGFSSPVLCSVQLSRCLYPQFYKHSLDSII
                     ERLGIVVEDRHRAMADVSALCDYLEYSLSEHGVEAWIRQCFRLMNPKPLPAALPERLR
                     EQLYGLPDGMGVLACFDGGGKVNYIGTFERVYSEVSALLDSGKAPFDWCNTEEVRFFP
                     ALGSLHAYKIKAELVGRYHSGCYVSAKNLLKTFTTVRFEKGSDGMLNAKTAALKNGVT
                     DNPPTGLFANKKAARRALSSWAETYGLCPAAAGILSDGYTEDEPCPVYVSDRCDKACV
                     RSDEQVLAFAHKLPVLDWGKMHEVEITETDPLTGEKVVLHGMGGALEMDDGLWYFDKD
                     LPDAFKAKFKTDRKNIKEIG"
BASE COUNT          711 a          784 c          475 g          587 t
ORIGIN      
        1 accgtcaatg cggaaaaaac acccaaattg gctataatcc cgacaaacac actcaaggac
       61 aacaacatgg cagcctcgcc cgaagcaaaa ttcactgaag aaaagatttt gtgggtcaaa
      121 caccacacgc cgaaactcat cactttcgcc atcagccgtc ccgaatccta ccgttttaaa
      181 gcgggacagt tctcccgact cggtttctac gaaggggaag gctttatttg gcgtgcctac
      241 tccatcgttt ccgcagaata tgccgacacg ctcgaatatt ttgccgtact catccaagac
      301 ggccccatgt ctgcccgttt cgccaaaatg caacagggcg acaccatcct gctcgataaa
      361 aatgccaccg gcttcctgct tcccgaacgc ttccccgacg gcaaggattt ggtgatgctc
      421 tgcaccggct ccggcatcgc ccccttcctt tccattctcg aacaacctga aatccggcag
      481 cgtttcgata ccgtcaacct gatacattcc gtatcttttc ccgaagaatt gattttcaac
      541 gaccggctcg ccgcattgac cgaacatccc ctggtaggcg aatacggaca ctcgttccgt
      601 ttcctccctg ttaccacccg tgccgccaac ccctcgggct taagcggaaa acgcattccg
      661 gaactcttaa aaaacaacag catcgaacag gcgctgcata ccaagttcac cccggaatcc
      721 acacggttta tgatttgcgg taacccggac atggtcaaag acactttcca aacgctgctt
      781 gacatgggtt acgccatgca ccgcaaccgc attcccggtc aaatcatgat ggaaaacggc
      841 ttctaaaaac caccctgctt gtccgatgcc ttcggatgga cggtcaaacc gacacggcac
      901 gaaaaccgcg tcggcaaaaa tgccgtctga aaagttcaga cggcatcttc ggacacatta
      961 cctgcaaacg gtaacacatt ccaacccaaa ccgattaggc aatcagtacg aacgactgtt
     1021 tacatacttg ccggctttca ccaaccggta tcgatttaac cgatttcctt aatatttttc
     1081 ctgtccgttt taaacttcgc cttaaacgca tccggtaaat ctttatcgaa ataccaaagc
     1141 ccgtcatcca tttctaatgc gccgcccatt ccatgcagaa caactttttc ccccgttaaa
     1201 ggatcggttt cggtaatttc cacctcatgc atttttcccc aatccaagac aggcagcttg
     1261 tgtgcaaacg ccaaaacctg ttcgtcagag cggacgcacg ccttatcaca tcggtctgaa
     1321 acatatacgg gacaaggctc atcctctgta taaccgtccg acaggatacc ggctgcggca
     1381 ggacacaatc cgtatgtttc cgcccacgac gacaaagccc gtctcgctgc ctttttattg
     1441 gcaaataatc cggtaggcgg attatccgtc acaccgtttt tcaaagccgc tgttttcgca
     1501 ttcaacatgc cgtctgaacc tttttcaaac ctgacggtcg taaatgtttt aagcagattt
     1561 ttggcagata cataacaacc cgaatgataa cgtccgacca attccgcttt aatcttatat
     1621 gcatgcaggc tgcccaatgc aggaaaaaaa cggacttcct ccgtattgca ccaatcaaac
     1681 ggggcttttc cggaatccaa taaagccgaa acctcgctat atacccgttc aaacgtaccg
     1741 atgtaattta cttttcctcc gccgtcgaaa caggccagca cccccatacc gtcaggcaaa
     1801 ccgtacaact gttccctcaa ccgttcgggc agcgcggcag gcaacggttt cggattcatc
     1861 aaacggaaac actgcctgat ccatgcctcg accccgtgtt ccgacagact gtattccaaa
     1921 taatcgcaca atgccgatac atccgccatc gcacgatgcc tgtcttccac aacaatcccc
     1981 aacctttcga tgatactgtc caggctgtgc ttgtaaaatt gcggatacag acaccgggac
     2041 agctgcacac tgcacaaaac aggcgatgaa aatccgatac ccacacgatg aaactcatgc
     2101 tttaaaaacg tatagtcgaa acggctgtta tgtgcaacca gcacacaacc cttcaatacc
     2161 gaaaacaact cgccggcaat ctctgcaaaa acaggcgcat cggcaaccat gccgtctgaa
     2221 atccccgtca gccccaccac aaactgcgga atcggttttt gaggattaac caaccactca
     2281 tgcctcacca cccttccctg ctcaaacttg accaaagcca cttcggttac cctgtcttca
     2341 tacagattgc cgcccgtcga ttccaaatca accacggcaa caggcattcc aaaccgtaaa
     2401 aatacctttt ccagcaaggg ccagcgagaa gcaacaatca ttttattctc tttaaattca
     2461 aacaacaaac caatatttta cacttttaag gcatttcatc caacaaaaca attgacagaa
     2521 tccgatgatt accctaaaat tcgaatcttt cttgcag
//
LOCUS       DAWGKF010000201         2547 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.201, whole genome shotgun sequence.
ACCESSION   DAWGKF010000201 DAWGKF010000000
VERSION     DAWGKF010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2547)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2547)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2547
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.201"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(84..890)
                     /locus_tag="WHR07_001946"
     CDS             complement(84..890)
                     /locus_tag="WHR07_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HEZ2131110.1"
                     /translation="MPTVFIFLTAVYAGLGAFAWHCQQQGRGRDYPWKTELPVLGAAL
                     TVHGAALLMPVIQDKIIIMGFGYSGSLIVWMMLFIYFAGSFFYPLRGVQLLLYPCAAL
                     MLLSGLVFPGKFSGYEITDLPFMLHIGTSLLAYGLFGIATLLSVLTLLLNRSLHRRSF
                     SKLAGFLPSLLSLEKLMFQAMWAGFILLTYSVVSGTFFAEAVFGKPMTFTHKTVFGIL
                     SWLIYGGLLLKHSMTAWRGKKAAVWTIIGFVSLMIAYMGSKFVLEIILKR"
     gene            1110..2480
                     /gene="ffh"
                     /locus_tag="WHR07_001947"
     CDS             1110..2480
                     /gene="ffh"
                     /locus_tag="WHR07_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEZ2131111.1"
                     /translation="MLDNLTGRFSNVFKNIRGQAKLTEDNIKEALREVRLALLEADVA
                     LPVVKEFVNNVKEKALGQEVAGSLTPDQAFIGVVNKALTELMGRENKTLDLSVAPPAV
                     VLMAGLQGAGKTTTAGKLARLLKNDQKKKVLVVSADVYRPAAIEQLRLLAEQVGVDFF
                     PSDTNQKPVEIATAAVDYAKKHFYDVLMVDTAGRLAIDEEMMNEIKALHAAVNPVETL
                     FVIDAMLGQDAVNTAQAFNEALPLTGVVLTKMDGDSRGGAALSVRHVTGKPIKFIGVG
                     EKINGLEPFHPDRLASRILGMGDVLTLIEDVQKGIDEEAAAKMAKKLQKGKGFDLNDF
                     KEQIQQMRNMGGLENLMSKMPGELGQISKQIPEGTAEKAMGKVEAIINSMTPKERANP
                     ALLKASRKRRIAMGAGTTVQEVNKLLKQFEQMQQMMKMFSGNGLGKLMRMAKGMKGMK
                     GMFPGL"
BASE COUNT          692 a          650 c          661 g          544 t
ORIGIN      
        1 ttcctccccc tcctctgact ggtgcgcctt tgtgaatatg ccgtctgaaa ctcggggact
       61 cagacggcat ctgttggctc ttcttatctt ttcagaatga tttccaatac gaacttgctg
      121 cccatatagg caatcataag gctgacaaat ccgatgatgg tccacacggc ggctttttta
      181 ccgcgccatg cggtcatgct gtgcttgagc agcagtccgc cgtaaatcag ccatgacaat
      241 atgccgaata cggttttatg ggtaaaggtc atgggtttgc cgaatacggc ttcggcgaag
      301 aatgtgccgc tgacgacgga ataggtcagc aggatgaaac ctgcccacat ggcctggaac
      361 atgagttttt ccaaactgag cagcgacggc aggaatcctg cgagcttgga gaagctcctg
      421 cggtgcaggc tccgattcag cagcagggtc aaaacggaca ataatgttgc gatgccgaac
      481 agcccgtatg caagcagcga agttccgata tgcagcataa agggaaggtc ggtaatttca
      541 tatcccgaga attttccagg aaaaaccaaa cctgacagca gcatcagtgc ggcgcaagga
      601 tacagcagca actgcactcc gcgcagcgga taaaagaagc tgccggcaaa ataaataaac
      661 agcatcatcc aaacaatcag gctgccggaa tacccgaagc ccataatgat gattttgtct
      721 tgaatgaccg gcataagcag tgccgcgccg tggacggtca atgccgcgcc caaaaccggc
      781 aattccgtct tccacgggta atcccggccg cgcccctgct gttggcagtg ccatgcaaat
      841 gcacccaatc ctgcgtaaac cgccgtcaaa aagatgaaaa ctgtcggcat ggtggacttt
      901 ctctatctat actgttgcgc cgtctgcggc cgcttatgaa atattggaac ttttaacgtt
      961 ggaattgtaa aatccccgtt tcgggcaagc cttgacggat ttgccgatat gctgtccggc
     1021 acacaagccg catcaaatta ttttgatttt attttaacaa agaatgcccc tgatggggca
     1081 agctattctt attcagacca aggaccagta tgttagacaa tttaaccggc cgcttcagca
     1141 atgtcttcaa aaacatccgg gggcaggcca aactgaccga agacaatatt aaagaggcct
     1201 tgcgcgaagt ccgcctcgcc ctgcttgagg cggatgtcgc cctgcctgtc gtcaaagagt
     1261 tcgtcaacaa cgtcaaagaa aaggccctcg gtcaggaagt ggctggcagc ctgacgccgg
     1321 atcaggcatt tatcggcgtg gtcaacaaag ccctgaccga actgatgggc agggaaaaca
     1381 aaacgctgga tttgtcggtt gcgccgcccg ccgtcgtgtt gatggcaggt ttgcagggcg
     1441 cgggcaagac gacgaccgcc ggcaaactcg cccgcctgct gaaaaacgat cagaagaaaa
     1501 aggttttggt cgtatctgcc gacgtttacc gccctgccgc gattgaacaa ctgcgcctgt
     1561 tggccgaaca ggtcggcgtg gactttttcc catccgatac caaccaaaaa ccggttgaaa
     1621 ttgcaactgc cgccgtcgat tacgccaaaa aacattttta cgatgttttg atggtcgata
     1681 ccgccggccg tctggcaatc gatgaagaga tgatgaacga aatcaaagcc cttcacgcgg
     1741 cggttaaccc ggtggaaact ttgttcgtca tcgatgcgat gctgggtcag gatgcggtga
     1801 acactgctca ggcatttaat gaagccctgc cgctgaccgg agtcgtattg accaagatgg
     1861 acggcgactc gcgcggcggt gcggcattgt ccgtacgcca tgtaaccggc aaaccgatta
     1921 aatttatcgg tgtcggcgaa aaaatcaacg gcctcgaacc tttccacccc gaccgtcttg
     1981 ccagccgtat cctcggcatg ggcgacgtat tgaccctgat tgaagacgtt caaaaaggta
     2041 ttgatgaaga agccgccgcc aaaatggcga aaaagctgca aaaaggcaaa ggcttcgacc
     2101 tcaacgactt taaagaacaa atccagcaaa tgcgcaatat gggcggtttg gaaaacctga
     2161 tgtcgaaaat gccgggcgaa ctgggtcaaa tatcgaaaca aatccccgaa ggtacggctg
     2221 aaaaagcgat gggtaaagta gaagccatca tcaactcgat gacccctaaa gaacgcgcca
     2281 accctgccct gctcaaagcc agccgcaaac gccgtattgc aatgggtgcg ggcacgaccg
     2341 tacaggaagt gaacaaattg ctcaaacagt ttgaacaaat gcaacaaatg atgaagatgt
     2401 tcagcggcaa cggcttgggc aaactgatgc gtatggcgaa aggaatgaag ggaatgaaag
     2461 gaatgttccc gggtttgtaa gccgatttga ccgaaaacgc cgtctaaaat ttcagacggc
     2521 gtttttgttt tatattctga tttatag
//
LOCUS       DAWGKF010000202         2497 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.202, whole genome shotgun sequence.
ACCESSION   DAWGKF010000202 DAWGKF010000000
VERSION     DAWGKF010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2497)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2497)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2497
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.202"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            168..791
                     /gene="lolA"
                     /locus_tag="WHR07_001948"
     CDS             168..791
                     /gene="lolA"
                     /locus_tag="WHR07_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HEZ2131112.1"
                     /translation="MMKPHNLFQFLAVCSLTVSVASAQAGAVDALKQFNNDADGISGS
                     FTQTVQSKKKTQTAHGTFKILRPGLFKWEYTSPYKQTIVGDGQTVWLYDVDLAQVTKS
                     SQDQAIGGSPAAILSNKTALESSYTLKEDGSSNGIDYVLATPKRNNAGYQYIRIGFKG
                     GNLAAMQLKDSFGNQTSISFGGLNTNPQLSRGAFKFTPPKGVDVLSN"
     gene            1064..2203
                     /locus_tag="WHR07_001949"
     CDS             1064..2203
                     /locus_tag="WHR07_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ2131113.1"
                     /translation="MKKTLVAAAILSLALTACGGGSDTAAQAPSAKPEAEQSGKLNIY
                     NWSDYVDPETVAAFEKETGIKTRSDYYDSNETLEAKVLTGKSGYDLTAPSIANVGRQI
                     KAGAYQKIDKAQIPHYSNIDKDLLKMMEAVDPGNEYAVPYFWGINTLAINTRQVQKAL
                     GTDKLPENEWDLVFKPEYTAKLKSCGISYFDSAIEQIPLALHYLGKDPNSENPEDIKA
                     AVDMMKAVRGDVKRFSSSGYIDDMAAGNLCAAIGYGGDLNIAKTRAEEAANGVEIKVL
                     TPKTGVGVWVDSFMIPRDAQNVANAHRYIDYTLRPEVAAKNGSFVTYAPASRPARELM
                     DEKYTSDASIFPNKELMEKSFIVSPKSAESAKLGVKLWQGLKAGK"
     gene            2336..>2497
                     /locus_tag="WHR07_001950"
     CDS             2336..>2497
                     /locus_tag="WHR07_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ2131114.1"
                     /translation="MDLSIVVPIYNVESYLEACLSSIEPILSNENVELILVNDGSKDG
                     SEDICYKYID"
BASE COUNT          675 a          733 c          620 g          469 t
ORIGIN      
        1 gcggcacaca attaaagggc agcgtggcgc gccgcctttt ccggtgggca aaaaatcagc
       61 cctcggaaaa cgcggtttgc aaaatgcaaa ccgaccgtaa cgccacccgt atgattgttt
      121 tgctgcgccg atactttacg ccacacccat cccgacaagg aaaaataatg atgaaaccgc
      181 acaacctgtt ccaattcctc gccgtttgct ccctgaccgt ctccgtcgct tccgcacagg
      241 cgggcgcggt ggatgcgctc aagcaattca acaacgatgc cgacggtatc agcggcagct
      301 tcacccaaac cgtccaaagc aaaaagaaaa cccaaaccgc gcacggcacg ttcaaaatcc
      361 tgcgcccggg cctcttcaaa tgggaataca cttcgcccta caaacagact attgtcggcg
      421 acggtcaaac cgtttggctc tacgatgtcg atttggcaca agtgaccaag tcgtcccaag
      481 accaggccat aggcggcagc cccgccgcca tcctgtcgaa caaaaccgcc ctcgaaagca
      541 gctacacgct gaaagaggac ggttcgtcca acggcatcga ttatgtgctg gcaacgccca
      601 aacgcaacaa cgccggctac caatacatcc gcatcggctt caaaggcggc aacctcgccg
      661 ccatgcagct taaagacagc ttcggcaacc aaacctccat cagtttcggc ggtttgaata
      721 ccaatcccca actctcgcgc ggcgcgttca agtttacccc gcccaaaggc gtggacgtgt
      781 tgagcaactg atgccgtccg ccccgatgcc gtctgaaagc cgccgaggct tcagacggca
      841 ttttcacgca ggcggaacaa tgtcccacat taccgcccga tcgggcatcg gaacggcaaa
      901 cccgtgaaaa ttaacggttg cgccccggct gtttttgccg tttaatgcaa accttgctgc
      961 accaagggcc aagaaagccg accggccgcc cccacagctt ccgatgcagg cggcccggcc
     1021 gtccctgcaa tgttttttat ttttgaacga aaggtcgaaa accatgaaaa aaacactggt
     1081 ggcggcggca atcctgagcc tcgccttgac tgcgtgcggc ggcggaagcg ataccgccgc
     1141 ccaagccccc tccgccaagc ctgaagccga acaatcgggc aaactcaata tctacaactg
     1201 gtcggattat gtcgatcccg aaaccgtcgc cgcctttgaa aaagaaaccg gcatcaagac
     1261 gcgttccgat tattacgaca gcaacgaaac actggaggca aaagtcctga ccggcaaatc
     1321 cggctacgac ctgaccgcgc cgtccatcgc caacgtcggc cggcaaatca aagcgggcgc
     1381 gtatcagaaa atcgacaagg cgcaaatccc ccattacagc aacatcgata aagatttgct
     1441 gaaaatgatg gaagccgtcg atccgggcaa cgaatacgcc gtcccctatt tctggggcat
     1501 caacaccttg gcaatcaaca cgcggcaggt gcaaaaggca ttgggtacgg acaagctgcc
     1561 cgaaaacgaa tgggatttgg tgttcaaacc cgaatacacc gccaaactca aatcctgcgg
     1621 catcagctat ttcgacagcg caatcgaaca gattcccttg gcgttgcact atttgggcaa
     1681 agatcccaac agtgagaatc ccgaagacat caaagccgcc gtcgatatga tgaaagccgt
     1741 ccggggcgac gtgaaacgct tcagctcttc cggctacatc gacgatatgg cggcgggcaa
     1801 cctgtgtgcc gccatcggtt acggcggcga tttgaacatt gccaaaaccc gtgccgaaga
     1861 agccgcaaac ggcgtggaaa tcaaagtatt gaccccgaaa accggcgtgg gcgtgtgggt
     1921 ggattccttt atgattccgc gcgacgcgca aaacgtcgcc aacgcccacc gctatatcga
     1981 ctacacgctc cggcccgagg tggcggcgaa aaacggcagc ttcgttacct acgcgcccgc
     2041 cagccgtccc gcgcgcgagc tgatggatga aaaatacacc tccgacgcat cgattttccc
     2101 gaacaaagaa ctgatggaaa aaagtttcat cgtatcgccc aaatccgcag aatccgccaa
     2161 actgggcgtg aagctgtggc aagggctcaa agcgggcaaa taaccgcaac ccctgccgtc
     2221 tgaaaccttt cgggcggcag gaaacggcgc gtccgttatc aaacaggggg gcgtttcccc
     2281 tcctgccggt tatgattggg ttaagattaa aatgatttag taaaatgaga aagatatgga
     2341 tttaagtatc gtagttccca tttataatgt cgaaagttat ttggaagcgt gtttaagttc
     2401 catagaacct atattaagta atgaaaatgt cgaacttatc cttgtgaatg acgggtcaaa
     2461 agacggaagt gaagatatat gttataaata tatagat
//
LOCUS       DAWGKF010000203         2445 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.203, whole genome shotgun sequence.
ACCESSION   DAWGKF010000203 DAWGKF010000000
VERSION     DAWGKF010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2445
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.203"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(119..1570)
                     /locus_tag="WHR07_001951"
     CDS             complement(119..1570)
                     /locus_tag="WHR07_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HEZ2131115.1"
                     /translation="MLSFLSGLLSLGIEVLWVRMFSFAAQSVPQAFSFTLACFLTGIA
                     VGAYFGKRICRSRFVDIPFIGQCFLWAGIADFLILGAAWLLTGFSGFVHHAGIFITLS
                     AVVRGLIFPLVHHVGTDGNKSGRQVSNVYFANVAGSALGPVLIGFVILDFLSTQQIYL
                     LICLISAAVPLFCTLFQKSLRLNAVSVAVSLMFGILMFLLPDSVFQNIADRPDRLIEN
                     KHGIVAVYHRDGDKVVYGANVYDGAYNTDVFNSVNGIERAYLLPSLKSGIRRIFVVGL
                     STGSWARVLSAIPEMQSMIVAEINPAYRSLIADEPQIAPLLQDKRVEIVLDDGRKWLR
                     RHPDEKFDLILMNTTWYWRAYSTNLLSAEFLKQVQSHLTPDGIVMFNTTHSPHAFATA
                     VHSIPYAYRYGHMVVGSATPVVFPNKELLKQRLSRLIWPESGRHVFDSSTVDAAAQKV
                     VSRMLIQMTEPSAGAEVITDDNMIVEYKYGRGI"
     gene            complement(1593..2213)
                     /locus_tag="WHR07_001952"
     CDS             complement(1593..2213)
                     /locus_tag="WHR07_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HEZ2131116.1"
                     /translation="MNSTASKTLKGLSLVFFASGFCALIYQVSWQRLLFSHIGIDLSS
                     ITVIISVFMVGLGVGAYFGGRIADRFPSSIIPLFCIAEVSIGLFGLVSRGLISGLGHL
                     LVEADLPIIAAANFLLLLLPTFMMGATLPLLTCFFNRKIHNVGESIGTLYFFNTLGAA
                     LGSLAAAEFFYVFFTLSQTIALTACFNLLIAASVWLRYRKDGYSEH"
BASE COUNT          765 a          580 c          570 g          530 t
ORIGIN      
        1 ggaataagaa ttcgggacaa aatgtttaaa ccattttgtc ccgactgctg tgatgcggtt
       61 tttttgaact agcaggacgt tacctaaaac ctgcgttgcc tgaaaccctt taagacggtt
      121 aaatccctct gccgtatttg tattctacaa tcatattatc gtcggtaatg acttccgccc
      181 cagccgaagg ttccgtcatc tgaatcagca tacgagagac aaccttttgt gctgcagcat
      241 ccacggtgct gctgtcaaat acgtgcctgc cgctttccgg ccaaatcaac cgggagagac
      301 gttgcttgag cagttcttta ttagggaaaa ctaccggggt tgccgagccg actaccatat
      361 gcccatagcg gtatgcatag ggaatactgt gtacggcggt agcaaaagca tgcgggctgt
      421 gcgtggtatt aaacattaca ataccatccg gggtaaggtg gctttgcacc tgttttaaaa
      481 attccgcact caacaggttg gtggaatagg cacgccagta ccaagtcgta ttcatcaaaa
      541 tcaggtcgaa tttttcatca ggatggcgac gcagccattt cctaccgtca tccaatacaa
      601 tttcaacacg tttgtcctgc aaaagcgggg cgatttgcgg ctcgtccgcg ataaggctac
      661 ggtatgccgg attgatttcc gcaacaatca tcgactgcat ttccggaatg gcagacaaga
      721 cgcgcgccca cgaacctgta ctcaatccaa cgacgaaaat gcggcgtatg ccagacttca
      781 gggagggtag cagataggca cgttcgatgc cgttgacact attgaataca tcggtattgt
      841 atgcgccgtc gtatacattc gccccataaa caaccttatc accatctcta tggtaaaccg
      901 caacaatgcc gtgtttgttt tcaatcagcc tatccggacg gtcagcaata ttttgaaaga
      961 cagaatccgg cagtaggaac atgaggatgc cgaacattag ggaaactgct accgacactg
     1021 cattcagtcg gagacttttt tggaacagtg tacaaaacaa agggacagca gcagaaatca
     1081 aacagatgag caggtaaatc tgttgggtgg acaagaaatc aagtatcaca aagccgataa
     1141 ggaccggacc caatgcactg ccggcaacgt tggcgaaata aacattggaa acctgtcgtc
     1201 cggatttgtt gccatccgta cccacatggt gtacgagcgg gaaaatcaac cctctgacga
     1261 cggcagacag ggtaatgaag ataccggcgt ggtggacgaa gccggaaaaa cccgtcaaca
     1321 accacgcagc acccaaaatc aaaaagtcgg caatacccgc ccacaagaag cactgcccga
     1381 taaagggaat atcaacaaag cggctgcggc aaatccgttt gccaaaatac gcgccgacgg
     1441 cgataccggt cagaaaacag gcaagagtaa atgaaaatgc ctgaggcacg gactgtgctg
     1501 cgaacgaaaa catccttacc cacaagactt ctatacccaa gctcaataag ccgctaagga
     1561 aagaaagcat ataaatcaaa ctagtattcg gtttagtgtt cactatatcc atcctttctg
     1621 taacgcagcc atactgaagc agcaatcaga aggttaaagc aggctgtcag cgcaatggtt
     1681 tgggagaggg taaaaaagac gtagaaaaat tcggcggcgg caagcgatcc gagtgccgca
     1741 cccaaagtgt tgaaaaaata taaggtaccg atagactcgc caacattatg tattttccgg
     1801 ttaaaaaaac aggtcagcaa gggcaaggtc gcgcccatca taaaggtagg aagcagcaat
     1861 aagaggaaat tggcagcagc gatgatgggc aaatcagcct caactaaaag atgccccaag
     1921 ccggaaatca gacccctgct taccaaaccg aacagaccga tggatacttc agcgatgcaa
     1981 aacaggggga tgatacttga aggaaaacgg tcagcaatgc gtccaccgaa atacgcacct
     2041 acacccaagc cgaccataaa tacagaaata atgacagtaa tcgaactcaa atcgatacct
     2101 atgtgactga atagaagcct ctgccagctg acctggtaaa tcagggcgca gaatccagag
     2161 gcgaaaaaca ccagcgacaa tcctttcagg gttttacttg cggtcgaatt catattttct
     2221 attttcaaat aggcggaact ataaatgaaa tgtatcaatg tgtaaacatt tgtattaacc
     2281 gtaggaaatc accgtattgc tcaaactgca ggccgggaaa ataaactcgt aagcccgcaa
     2341 acggcgtatc actgttcaaa ctgctgtgcg gcttcacggt gttataaaaa taatggggct
     2401 gtcctggaca actaagataa actcgatttt actaattgtt ttaaa
//
LOCUS       DAWGKF010000204         2440 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.204, whole genome shotgun sequence.
ACCESSION   DAWGKF010000204 DAWGKF010000000
VERSION     DAWGKF010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2440)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2440)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2440
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.204"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(425..2305)
                     /locus_tag="WHR07_001953"
     CDS             complement(425..2305)
                     /locus_tag="WHR07_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNB domain-containing ribonuclease"
                     /protein_id="HEZ2131117.1"
                     /translation="MNIFYEESGQFKIAAIIQKNDATYQVDTQHGKRTKVKANNVFAE
                     FDGDMAAFLENAQAQAADIDTDLLWEVCGEEEFSAEAIAEEYFGHAPTKTELAATLIA
                     LYAAPMYFYKKAKGVFKAAPEETLKQALAAIERKKQQDAQIDAWAEALKRGEMPSEIA
                     ADLKTILHAPDKQSLTYKAFTKAADALKISAYELAKKTGGITSIPQYLQDGFEIKYFP
                     KGTGFPDLALPEMPDLPKADVTAFSIDDESTTEVDDALSLTDLDNGTKRVGIHIAAPS
                     LAVKPGDKMEKNIMERLSTVYFPGGKITMLPENWIAAFSLDAGAHRPAVSIYFDVDSE
                     FNTGEPTCKIEAVNISENLRIQAIEPHFNAEAGLDEAGEMMFAHHQDLIWFYQFAIAL
                     QKARGKYEPDRAPQYDYSIELDEEGNVSIVRRERGSPIDTLVSEMMILANSTWAQMLD
                     ENDLPGLFRVQPAGKVRMSTKSEPHIGMGVQHYGWFTSPLRRAADYINQKQLISLIDD
                     TAEPLFQQSDAELFAALRDFDAAYTAYADFQRQMEAYWSLVYLQQQGTSELTATILKE
                     DLVRIEGLPLVTRATGIPFDALPKSQALFKITELDAEKQFVSLNYIKAVAPAGTTAGN
                     AV"
BASE COUNT          496 a          590 c          722 g          632 t
ORIGIN      
        1 atttccacct gcgcgggaat gacgattcag aagttgcccg aaacctaaaa aactgaaacc
       61 gaacgagccg gatttccgct ttcgcgggaa tgacggcgta taagttcccg tgcggacaga
      121 cctatattcc cacctgcgcg ggaatgacga ttcagaagtt acacgaaact caaaaaaaac
      181 gaaaccgaac gaaccggatt cccgctttta cgggaatgac ggcgcataag ttcccgtgcg
      241 gacagaccta gattcccacc tgcgtgggaa tgacgggatt ttagattgcg ggtatttatc
      301 gggaacggcg gcttggaagt tcattgaaac ggaaaaacaa cggaaaccca aaaaaccgga
      361 ttcccgactg tgggaatgat gagattcagg tttctgtttt tgccggagtt tgccgtatcg
      421 ggcttcagac ggcattgcct gccgttgtac ccgcgggtgc gactgccttg atgtagttga
      481 gcgagacaaa ctgcttctcg gcatccaatt cggtgatttt gaacaatgcc tgtgatttgg
      541 gcagcgcgtc aaacggaata ccggtcgcgc gcgttaccag cggcaggcct tcaatgcgga
      601 cgaggtcttc tttgaggatg gtggccgtca gctcgctcgt gccttgctgt tgcagataga
      661 cgaggctcca gtaggcttcc atttggcgtt ggaagtcggc gtaggctgta taggcggcat
      721 caaagtcgcg cagcgcggcg aagagttcgg catcgctttg ttggaaaagc ggctcggcgg
      781 tgtcgtctat caggctgatc agttgctttt ggttgatgta gtcggcggcg cggcgcagcg
      841 gcgaggtaaa ccagccgtaa tgctgcacgc ccattccgat gtgcggctcg gatttggtgc
      901 tcatacgcac tttgcctgcc ggttgcacgc ggaaaaggcc gggcaggtcg ttttcatcca
      961 acatttgcgc ccaagtgctg ttggcaagaa tcatcatctc gctgaccagc gtatcgatgg
     1021 gcgaaccgcg ttcgcggcgg acgatggata cgttgccttc ctcatccaat tcgatgctgt
     1081 aatcgtattg cggcgcacgg tcgggctcgt atttgccgcg tgctttttgc agggcgatgg
     1141 cgaattgata gaaccaaatc aggtcttgat ggtgggcgaa catcatttcg cccgcttcgt
     1201 ccaagcccgc ttcggcgttg aaatgcggtt cgatggcttg gatacgcagg ttttcggaga
     1261 tgttgaccgc ttcgattttg caggtcggtt cgccggtgtt gaactcgctg tccacatcga
     1321 aataaatgct gacggcaggg cggtgtgcgc ctgcatcaag gctgaacgcg gcaatccagt
     1381 tttcgggcag catcgtgatt ttgccgccgg ggaaataaac cgtgctcaag cgttccatga
     1441 tgtttttttc cattttgtcg cccggtttaa cggcaagtga cggcgcggcg atgtggatgc
     1501 cgacacgctt cgtgccgttg tccaagtcgg tcaggcttaa agcgtcgtcc acttcggtgg
     1561 tcgattcgtc gtcaatggaa aaggcggtaa cgtcggcctt gggcaggtcg ggcatttcgg
     1621 gaagggcaag gtcggggaag cctgtgcctt taggaaagta tttgatttca aacccgtctt
     1681 gcaggtattg cggaatggac gtaatgccac ccgttttttt cgccaattcg taggcggaga
     1741 ttttcagtgc gtcggcggct ttggtaaagg ctttgtaggt cagcgactgt ttgtcgggcg
     1801 cgtgcaggat ggttttcaaa tccgccgcga tttcagacgg catctcgccc cgttttaagg
     1861 cttccgccca agcgtcgatt tgcgcgtctt gctgtttttt gcgttcgatg gcggcaagcg
     1921 cttgtttcaa agtttcttcg ggcgcggctt tgaacacgcc tttggctttt ttgtagaaat
     1981 acatcggcgc ggcgtaaagc gcaatcaagg tcgccgccag ctcggttttg gtcggcgcat
     2041 gaccgaaata ttcttcggcg atggcttcgg cggaaaattc ttcttcgccg catacttccc
     2101 acaataaatc ggtgtcgatg tccgccgcct gtgcctgcgc gttttccaaa aacgccgcca
     2161 tatcgccgtc aaactcggca aagacattgt ttgccttcac tttggtgcgc ttgccgtgtt
     2221 gggtatcgac ttggtaggta gcgtcgtttt tttggatgat ggcggcgatt ttgaattggc
     2281 cggactcttc gtaaaaaata ttcatttttc ggatttttct gtggaaactc aagcgggcga
     2341 ttttagcaga ttaccgaaaa tgccgtctga aaaaaggttg ggagagggtt ggcgcgtctt
     2401 tgcggtgctt gcgttatagt ggattaacaa aaaccagtac
//
LOCUS       DAWGKF010000205         2432 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.205, whole genome shotgun sequence.
ACCESSION   DAWGKF010000205 DAWGKF010000000
VERSION     DAWGKF010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2432)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2432)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2432
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.205"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(227..1861)
                     /gene="groL"
                     /locus_tag="WHR07_001954"
     CDS             complement(227..1861)
                     /gene="groL"
                     /locus_tag="WHR07_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271863.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEZ2131118.1"
                     /translation="MAAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAF
                     GGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAE
                     GMKYVTAGMNPTDLKRGIDKAVAALVDELKNIAKPCDTSKEIAQVGSISANSDEQVGA
                     IIAEAMEKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINDAEKQIAGLDNP
                     FVLLFDKKISNIRDLLPVLEQVAKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAV
                     KAPGFGDRRKAMLQDIAILTGGQVISEEVGLSLEKATLEDLGQAKRIEIGKENTTIID
                     GFGDAAQIEGRVAEIRQQIEVATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHTGNADQDAGVQIVLRAVESP
                     LRQIVANAGGEPSVVVNKVLEGKGNYGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAA
                     SIAGLMLTTDCMIAEIPEDKPAMPDMGGMGGMGGMM"
     gene            complement(1954..2244)
                     /locus_tag="WHR07_001955"
     CDS             complement(1954..2244)
                     /locus_tag="WHR07_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEZ2131119.1"
                     /translation="MTIRPLHDRVVVKRLEAEEKTASGIVLPGAAAEKPDMGEVIAVG
                     AGKIGKDGARRPLDVKVGDKIIFGKYSGQTVKADGEELLVMREEDIFGIVEK"
BASE COUNT          491 a          656 c          629 g          656 t
ORIGIN      
        1 ttcgcgggaa tgacggcgga aaggttgctg tttttccgat aaattcctgc cgctcttcgt
       61 ttttgggatg gcgggaaata aaacaaaagc gcgcgtatca aaaaataaca atgcaaagaa
      121 cggtgttggc aattttaagg tttgcgcctt agccgcactt attcgcaaaa aaaccgcacg
      181 gcgttgaccg tgcggcttgt tgtctgaagg cttcagacgg cattgcttac atcatgccgc
      241 ccataccacc catgccgccc atatcaggca tagccggttt gtcttcaggg atttcagcaa
      301 tcatgcagtc tgtggtcagc atcaggccgg cgatagacgc ggcgtgttgc agcgcggaac
      361 gggttacttt ggcggggtcg agtacgccca tttcgatcat gtcgccgtat tcgccgctgc
      421 cagcgttgta accatagttg cctttgcctt ccaacacttt gttcacaacc acgctgggtt
      481 cgccgcctgc gttggcaacg atttggcgca gcggagactc aacggcgcgc aagacgattt
      541 gtacgcctgc gtcttggtct gcattgccgg tgtgcaggtt ttccagagcg gcacgggcgc
      601 gcaacagggc tacgccgccg cctgcgacca cgccttcttc aacggcggca cgggtcgcgt
      661 gcagcgcgtc ttctacgcgg tctttcttct ctttcatttc cacttcggtt gcggcaccga
      721 ctttaatcac cgccacaccg ccggccaatt tggccacgcg ctcttgcagt ttttcacgat
      781 cgtagtcgct ggtggccact tcgatttgct gacggatttc cgccacacgg ccttcgattt
      841 gggcggcatc accgaagcca tcaataatgg tggtgttttc tttgccgatt tcaatgcgtt
      901 tggcttgacc caaatcttcc aaagtggctt tttccaaaga caagcccact tcttccgaaa
      961 tcacttggcc accggtcaaa atggcgatgt cttgcaacat ggctttgcga cggtcgccaa
     1021 agcccggtgc tttcacggcc acggttttca ggatgccgcg gatgttgttc accaccaaag
     1081 tcgccaaggc ttcgccttcc acgtcttcag cgataatcaa gagcggacgg ctggctttgg
     1141 ccacttgttc caaaacaggc agcaggtcgc ggatattgct gatttttttg tcgaacagca
     1201 atacaaacgg attgtccaag ccggcgattt gtttttccgc atcgttgatg aagtaaggag
     1261 acaggtagcc gcggtcgaat tgcatacctt caaccacgtc cagctcgttt tccaaagatt
     1321 tgccgtcttc aacggtaatc acgccttctt tgccgacttt ttccatcgct tcggcgataa
     1381 tcgcgccgac ttgttcgtcg gagttggcgg aaatagagcc gacttgggcg atttctttag
     1441 aagtatcgca aggtttggcg atgtttttca gctcgtcaac caaagcggca acggctttgt
     1501 cgataccgcg tttcaggtcg gtcggattca taccggcggt aacgtatttc ataccttcgg
     1561 caacgatgga ttgtgccaat acggtggcgg tagtcgtacc gtcgcccgcc acgtcgttgg
     1621 ttttggacgc gacttctttc accatttgcg cgcccatatt ttcaaacttg tctttcagtt
     1681 cgatttcttt ggcgacggtt acgccgtctt tggtgatgtg cgggccgccg aaagcgcggt
     1741 caacgactac gttgcggcct ttggggccca aggttacgcg cacggcgttt gccaaaatgt
     1801 tcacgccgtt taccattttt tggcggactt cattgccgaa ctgtacgtct tttgctgcca
     1861 tttcaattct ccaaaaatca ttaaaactgt ctgataaaac cgtttatgcc gtctgaaggc
     1921 ggtttgccgt ttcagacggc atcgtgtccg tatttatttt tcaacgatgc cgaaaatatc
     1981 ttcttcacgc attaccaaca gctcttcgcc gtcggctttg acggtttggc cgctgtattt
     2041 gccgaaaatg attttgtcgc cgactttgac atccagcgga cggcgcgcgc cgtctttgcc
     2101 gattttgccc gcgcccacgg cgatgacttc gcccatatcg ggtttttcgg cggccgcacc
     2161 cggcaaaacg atgcccgatg cggttttctc ttcagcttcc aagcgtttga cgacaacgcg
     2221 gtcgtgtaaa ggacggatgg tcatatttat gctccgataa aatgatttga aaacaatcat
     2281 ctgcccgaac ggttcggaca gattgaagtg gaaaccgggc tgccgcctgc cggcccgccc
     2341 gtataagtcg gcaaaattag ggtgtgtgcg ggtaaattca agtgaggcgg aaaaaaattt
     2401 atttccgccg ttttttatag tggactaaat tt
//
LOCUS       DAWGKF010000206         2406 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.206, whole genome shotgun sequence.
ACCESSION   DAWGKF010000206 DAWGKF010000000
VERSION     DAWGKF010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2406)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2406)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2406
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.206"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(4..624)
                     /locus_tag="WHR07_001956"
     CDS             complement(4..624)
                     /locus_tag="WHR07_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ2131120.1"
                     /translation="MTTHHVELRNVTKRFGAQKAVNQVDLVLKAGESVGLAGYNGAGK
                     STIMKLILGLITPTEGEVMLLGERTGSKAGARLRSQIGYLPETVALHPSLTGIETLDF
                     YAKLKKQPLTQNRGLLERVGISQAAHRRVGTYSKGMRQRLALAQALLGEPKVLLFDEP
                     TTGLDPASRQMFYEVVRELNGRGATVLLSTHALAELDGHADRIIVD"
     gene            complement(682..1914)
                     /locus_tag="WHR07_001957"
                     /pseudo
     CDS             complement(682..1914)
                     /locus_tag="WHR07_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712464.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase family maturation
                     protein NosD"
     gene            complement(1917..2342)
                     /locus_tag="WHR07_001958"
                     /pseudo
     CDS             complement(1917..2342)
                     /locus_tag="WHR07_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701621.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NosR"
BASE COUNT          518 a          626 c          660 g          602 t
ORIGIN      
        1 aatttaatcc acgataatgc ggtcggcgtg tccgtccaac tcggcaaggg cgtgggtgct
       61 gagcaatacg gtcgcgccgc gcccgttgag ttcgcgcacg acttcgtaaa acatttgtcg
      121 tgatgcaggg tcgaggccgg ttgtcggttc gtcaaacagc aggactttgg gctcgcccag
      181 cagggcttgt gccaaggcaa ggcgttggcg catcccttta gaataagtgc cgacgcggcg
      241 gtgtgccgcc tgtgaaatgc cgacgcgctc aagcagcccc cggttctgcg tgagcggctg
      301 ttttttaagt ttggcataaa aatccagcgt ttcgatgccg gtcagcgaag ggtgcagcgc
      361 aacggtttcg ggcaggtagc cgatttggct gcgaagccgc gcccccgctt tgctgccggt
      421 acgttcgccc aaaagcatca cttcgccttc ggtcggggta atcagcccga gtatcagctt
      481 cataatggtg gacttgcccg cgccgttgta tccggcaagc ccgacgcttt ctcctgcctt
      541 caaaaccaaa tcgacttggt tgacggcttt ttgcgccccg aaccgtttgg tgacattcct
      601 caattcgaca tgatgtgtgg tcatggttgt tccttttgtg ttttcagacg gcatttggat
      661 ccggatgccg tctgaagcag actagttcaa agaaccgttt tccgccctgc cccattccga
      721 ctgccgtgtt tcggcttctt tgagcaactc gtccttcatt gcctgatagc gggtttgaat
      781 tttggggaca taaggcttca tcagcggttt gctgtccacc acgccgccgg gcagaacggc
      841 gggaaactgc gcctgcgccc atttgacgat gctgattgcg agactgttca tcaagaggcg
      901 caatacgggc gcgcgccaga tgatttggtc gatgatgccg ttgggccggt acgcgctgtc
      961 gccgaagccg tcgccgttca aatcgaacgc actgttgtcg ctccaatagt tgccgtgtcc
     1021 gccctcgctc cagtcgagaa agcgcgtgct gacgtatttg acctggcttt cgttgttgat
     1081 aaaggaattg tcgtgcaggg acgtgccttc gatggcggcg gtaaagtgta tgccgatttg
     1141 gcagttttca aaatgattgg cggacagttt atcgtagttg gcattgtagg caaaaacgca
     1201 cttgcccgct ttgttgataa tgttgtcgtg aatatcggaa tagttgacat agttgagcat
     1261 gatgccttgg tcgcggctgc cgacggcgat attgtcaaac actttgagcc gctcggaaaa
     1321 catcagcaca tagcccatat tgttgcccac ggaaatattg ccgctgattt cgctgtcgtt
     1381 ggtgtacata tagtggacgg cgaaacgcaa atcgctgaag cggttgtttt tataggtgtt
     1441 gtgcgtgctg gtattggaaa aaatgccgtc gcggcctttg gaaatatcgt tgccgacgac
     1501 ctgcgcgccg ggcgcgttcc aaacggtaac gccgttgcct cgctcgttca cgcgcaaagt
     1561 cgcatcgcca acaattttgt tctcgcgcac catcgcatcg gcagaaccat gcagatatac
     1621 gccgaccgaa ttatccaaaa tattgttgtg ttcaatcagg gcgcgcgggg cggtttcttc
     1681 gagataaata ccggcatcca ttgcaggcag gctcataccg gaacgggtaa cggtcaggtt
     1741 gcggagcgtt acgtccggcg catgcacagc tatcgtacgt ccgctcctgt ctccttcgat
     1801 ggttgcagaa cggtcagcag gcccttcaat cgtaatcggt ttgtcgatat aaagtttggt
     1861 ttgatatacg ccggaagcca gtttgagcgt atcgcccgca tgggcgcggg caaatgcggg
     1921 ataccgatca gcataatcgg ttcgtgatga tcgaccagtt tcgctccggc tatcgtgccg
     1981 tcatttgcca aagccatcag cgtatcgatc ggtttgttcg aataaccgcg cgtattgacc
     2041 gcatcggtcg tgatatagac caagcccaac tgctcatcgc ctttgtaaac gcgggcaacc
     2101 ataggcttgc cttccggctt gccgtaacgg tccgcacccg gaaaaatttc cgaaggctgt
     2161 attttcgcca gaaaatcagg cagacgctcc gcataagcgg gcagtgccgc cgtcaaaaag
     2221 acaaaggcgg taaaaaacac tgttatccgc gcccgaaacg cggacatacg tttgattgaa
     2281 aaacaggaca tgactatccc cgatataccg atactcttta atattgatat tatatgaatc
     2341 atctatcggc gattttttga tgcaaattaa atttacaaat cttaaaacca atccgcatac
     2401 gggata
//
LOCUS       DAWGKF010000207         2338 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.207, whole genome shotgun sequence.
ACCESSION   DAWGKF010000207 DAWGKF010000000
VERSION     DAWGKF010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2338
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.207"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            43..2256
                     /locus_tag="WHR07_001959"
     CDS             43..2256
                     /locus_tag="WHR07_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEZ2131121.1"
                     /translation="MTAISPIQDTQSATLQELREWFDSYCAALPDNDKKLVLAARSLA
                     EAHYPADAVTPYGEPLSDHFLGAAQMVDELDLLPDAVAATLLADIGRYVPDWNLLVSE
                     RCNSTVAELVKGVDEVQKLTHFARVDSLATPEERAQQAETMRKMLLAMVTDIRVVLIK
                     LAMRTRTLQFLSNVPDNPEKRAVAKETLDIFAPLANRLGVWQLKWQLEDLGFRHQEPE
                     KYREIALLLDEKRTERLEYIENFLNILRTELKKYNIHFEVAGRPKHIYSIYKKMVKKK
                     LSFDGLFDIRAVRILVDTVPECYTTLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTV
                     IVGPEDKGVEVQIRTFDMHQFNEFGVAAHWRYKEGGKGDSAYEQKIAWLRQLLDWREN
                     MAESGKEDLAAAFKTELFNDTIYVLTPHGKVLSLPTGATPIDFAYALHSSIGDRCRGA
                     KVEGQIVPLSTPLENGQRVEIITAKEGHPSVNWLYEGWVKSNKAIGKIRAYIRQQNAD
                     TVREEGRVQLDKQLAKLTPKPNLQELAENLGYKKPEDLYTAVGQGEISNRAIQKACGT
                     LNEPPPVPVSETTIVKQSKIKKGGKNGVLIDGEDGLMTTLAKCCKPAPPDDIVGFVTR
                     DRGISVHRKTCPSFRHLAEHAPEKVLDASWAALQEGQVFAVDIEIRAQDRSGLLRDVS
                     DALARHKLNVTAVQTQSRDLEASMRFTLEVKQVNDLPRVLASLGDVKGVLSVTRL"
BASE COUNT          598 a          755 c          566 g          419 t
ORIGIN      
        1 ctgttacaat aaactcgttt ttatcggaac gaaagaccca tcatgaccgc catcagcccg
       61 attcaagaca cgcaaagcgc gactctgcaa gaattgcgcg aatggttcga cagctactgc
      121 gccgcgctgc cggacaacga taaaaaactt gtcttagccg cccgttcgct ggcggaagca
      181 cattaccccg ccgatgccgt cacgccgtat ggcgagccgt tgtccgacca cttcctcggc
      241 gcggcacaaa tggtcgacga actcgacctg ctgcccgatg ccgtcgccgc caccctgctt
      301 gccgacatcg gacgctacgt ccccgattgg aatctattgg tttccgaacg ctgcaacagc
      361 accgtcgccg agctggtcaa aggtgtggac gaagtgcaga aactcaccca cttcgcccgg
      421 gtggacagcc tcgccacgcc agaagaacgc gcccagcagg cagaaactat gcggaaaatg
      481 ctgctggcga tggttaccga catccgcgtc gtgttaatca aactggcgat gcgtacgcgc
      541 accctgcaat tcttaagcaa cgttcccgac aatcctgaaa agcgcgccgt tgctaaagaa
      601 accctcgaca tttttgcccc actcgccaac cgcttgggcg tgtggcaact caaatggcag
      661 ctcgaagatt tgggcttccg tcatcaagag ccggaaaaat accgcgaaat cgccctgctt
      721 ttggacgaaa aacgcaccga gcgcctcgaa tacatcgaaa acttcctcaa tatcctgcgt
      781 acggaactca aaaaatacaa tatccacttt gaagtcgccg gccgcccgaa acacatctac
      841 tccatttaca aaaaaatggt gaagaaaaaa ctcagcttcg acggcctctt tgacatccgc
      901 gccgtgcgga ttctggttga taccgtcccc gagtgttaca ccacgctggg cattgtccac
      961 agcctttggc agcctatccc cggcgagttc gacgactaca tcgccaaccc gaaaggcaac
     1021 ggctataaaa gtttgcacac cgtcatcgtc ggtcccgaag acaaaggtgt ggaagtgcaa
     1081 atccgcacct tcgatatgca ccaattcaac gaattcggtg tcgccgccca ctggcgttac
     1141 aaagaaggcg gcaaaggcga ttccgcctac gagcaaaaaa tcgcctggtt gcgccaactt
     1201 ttggactggc gcgaaaatat ggcggaaagc ggcaaggaag acctcgccgc cgccttcaaa
     1261 accgagcttt tcaacgacac gatttatgtc ctgaccccgc acggcaaagt cctctccctg
     1321 cccacgggcg cgacccccat cgacttcgcc tacgccctgc acagcagcat cggcgaccgt
     1381 tgccgcggtg cgaaagtcga agggcagatt gtgccgctgt ccaccccgct cgaaaacgga
     1441 cagcgcgtcg aaatcattac cgccaaagaa gggcatcctt ccgtcaactg gctttacgaa
     1501 ggctgggtca aatccaacaa ggcaatcggc aaaatccgcg cctacatccg ccagcaaaac
     1561 gccgacaccg tgcgcgaaga aggccgcgtc caactcgaca aacagcttgc caaactcacg
     1621 cccaaaccca acctgcaaga gcttgccgaa aatctcggct acaaaaagcc agaagacctc
     1681 tacaccgccg tcggacaagg cgaaatttcc aaccgcgcca tccaaaaagc ctgcggcacg
     1741 ctgaacgaac cgccgcccgt acccgtcagc gaaaccacca tcgtcaaaca gtccaaaatc
     1801 aaaaaaggcg gcaaaaacgg cgtgctcatc gacggcgaag acggtctgat gaccacgctt
     1861 gccaaatgct gcaaacccgc gccgcccgac gacattgtcg gcttcgttac ccgcgatcgc
     1921 ggcatttcgg tacaccgcaa aacctgcccc tctttccgac acctcgccga acacgcgccc
     1981 gaaaaagtac tggacgcaag ttgggcggcg ttgcaggaag gacaagtgtt cgccgtcgat
     2041 atcgaaatcc gcgcccaaga ccgctccggg cttttgcgcg acgtatccga cgcgctcgcc
     2101 cgccacaaac tcaacgttac cgccgtgcaa acccagtccc gcgacttgga agccagtatg
     2161 cggttcacgc tcgaagtcaa acaggtcaac gacctcccgc gcgtcctcgc cagcctcggc
     2221 gacgtcaaag gcgtattgag cgttacccgg ctttaaatac aaaaatgccg tctgaaagcc
     2281 gtataacgct tcagacggca ttttgattga cggggtttgc tattttttgt tgcatagt
//
LOCUS       DAWGKF010000208         2334 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.208, whole genome shotgun sequence.
ACCESSION   DAWGKF010000208 DAWGKF010000000
VERSION     DAWGKF010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2334)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2334)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2334
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.208"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(80..1489)
                     /gene="dacB"
                     /locus_tag="WHR07_001960"
     CDS             complement(80..1489)
                     /gene="dacB"
                     /locus_tag="WHR07_001960"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HEZ2131122.1"
                     /translation="MNFPKTAASLLLLLASLAAHALDTGRIPQNEIAVYVQELDSGKV
                     IIDHRSDVPVNPASTMKLVTAFAAFKTFGSNYRWATEFKSNGTVNDGTLDGNLYWAGS
                     GDPVFNQENLLAVQRQLREQGIRNITGHLMLDHSLWGEVGSPDDFEADSGSPFMTPPN
                     PTMLSAGMVMVRAERNAADSTDILTDPPLPHIFAQNNLKITASQAACPSIKKLMRASF
                     SDNTLKLRGNIPESCLGKPVGVRMFALDELIRQSFTNHWLLGGGRISDGIGISDTPEG
                     AQTLAVAHSKPMKEILTDMNKRSDNLIARSVFLKLGGDGKLPAVSEQAASAVRRELAV
                     SGIDIADLVLENGSGLSRKERVTARMMAQMLETAYFSPFAQDFIDTLPIAGTDGTLRN
                     RFKQSGGLLRLKTGTLNNVRALAGYWLGDKPMAVVVIINSGRAVSLLPDLDNFVAKNI
                     ISGGDGWLDAKLMCKERRA"
     gene            1654..2220
                     /locus_tag="WHR07_001961"
     CDS             1654..2220
                     /locus_tag="WHR07_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEZ2131123.1"
                     /translation="MAKKISILVGSLRRASFARKVALNAAEMFPEGWQAEIVEIGHLP
                     LYNFDYDDPAVEDVPLPESYTVFRETIKASDGILFVTSENNRTIPACLKNAVDIGSKP
                     NADVAWKNKPAGIISHSVGKMGGYSSQKNLRLALSYFDMPVTGQPEVFLGNSPTLFDE
                     NGKLIDSARDFVQSYINQFVGLIERNAK"
BASE COUNT          538 a          566 c          668 g          562 t
ORIGIN      
        1 ttaaaacaat tagtaaaacc gagtttatcc tagttatcta ggacagcccc ttaaatttaa
       61 tccactatat tttcctgttt caggctcggc gttctttgca catcagtttc gcatccagcc
      121 agccgtcgcc gccggagatg atgtttttgg caacgaagtt gtccaagtcg ggcagcaggg
      181 aaacggcgcg gccgctgttg atgatgacga ccaccgccat cggtttgtcg cccagccaat
      241 aacctgcaag ggcgcggaca ttgttgagcg tgccggtttt taagcgcaac agcccgccgc
      301 tttgtttgaa gcggttgcgt aaagttccgt ctgtgccggc gatgggcagc gtgtcgatga
      361 aatcttgtgc aaacgggctg aaataagccg tttccaacat ttgcgccatc attctcgccg
      421 ttaccctttc ttttctggac agacctgaac cgttttccaa aaccaaatcc gcaatatcga
      481 tgcccgacac ggcaagttcg cgccggacgg cagacgccgc ctgttcggaa acggcgggca
      541 gtttgccgtc gccgccgagt ttgaggaaga cggaacgcgc aattagattg tccgaacgct
      601 tgttcatgtc cgtcaaaatt tccttcatcg gctttgagtg tgcaacggca agcgtctgcg
      661 cgccttccgg cgtgtcggat atgccgatgc cgtctgaaat ccgtccgccg ccgagcagcc
      721 agtggttggt aaaactttgc cggatcagtt cgtcaagcgc gaacatccgg acaccgacag
      781 gcttgcccaa acagctctcg ggaatattgc cgcgcaattt cagcgtattg tccgaaaaag
      841 atgcacgcat cagttttttg atcgaagggc aggcagcttg ggaggcggta attttcaagt
      901 tgttttgggc gaaaatatgc ggcaaaggcg gatcggtgag gatgtcggta ctgtcggcgg
      961 cattgcgttc ggcgcgcacc ataaccatac cggcagacag catagttgga ttggggggcg
     1021 tcataaacgg cgaaccgctg tcggcttcga aatcgtcggg gctgccgact tcgccccaca
     1081 ggctgtggtc gagcatcagg tgtcccgtga tattgcgtat gccttgttcg cgcaactggc
     1141 gttggacggc aagcaggttt tcctgattga aaacggggtc gccgctgccc gcccaataca
     1201 ggtttccgtc aagcgtgccg tcgtttaccg taccgttgct tttaaactcg gtcgcccagc
     1261 ggtaattgct gccgaaggtt ttgaaggcgg caaacgcggt aacgagtttc attgtggagg
     1321 cggggttgac ggggacatcc gagcggtggt caatgatgac ttttccgctg tcaagctctt
     1381 ggacatatac ggcgatttcg ttttgcggaa tgcgacctgt atcgagcgcg tgtgcggcga
     1441 gggaggcgag aagcagcagc agggaggccg ctgttttggg gaaattcata ggtaaatctg
     1501 ttacataaaa aaagcaatta taaggcaaag ccggataagt gggaacgctg tggcggcggg
     1561 ccggcttgtt tgcaggggaa atcacatata taataatcgc tatcattatg aaatgattga
     1621 gacgcacaaa cttaatattc aggaggaatg attatggcta agaaaatcag tattttggtg
     1681 ggcagcctgc gccgtgcttc ttttgcgcgc aaagtggcat tgaatgcggc ggagatgttc
     1741 cccgaaggct ggcaggcgga aatcgtcgaa atcggacatc tgccgcttta caatttcgat
     1801 tatgacgacc ctgcggtgga agatgtgccg ctgcccgaaa gctacacggt tttccgcgaa
     1861 acgattaagg cttcggacgg cattttgttc gttacgtccg aaaataaccg caccattccc
     1921 gcctgtttga aaaatgcggt ggacatcggc tcgaaaccga atgccgacgt ggcgtggaaa
     1981 aacaaaccgg ccggcatcat cagccattcc gtcggcaaga tgggcggtta cagttcgcaa
     2041 aaaaacctgc gccttgcgct gtcttatttc gatatgcccg taaccggaca gccggaagtg
     2101 tttttgggca attcgccgac actgtttgat gaaaacggca aattgatcga ctcggcaagg
     2161 gattttgttc agtcatatat taatcagttt gtcggtttga ttgaaagaaa tgccaaataa
     2221 acaaacaagt cgaaaggccg caaaaccggt tcgggttttg cggctttttt atatgggctg
     2281 ggcagcgtca aggtttgccg tttgccggat aatgcgcggc aaatgaccgg cgtg
//
LOCUS       DAWGKF010000209         2327 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.209, whole genome shotgun sequence.
ACCESSION   DAWGKF010000209 DAWGKF010000000
VERSION     DAWGKF010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2327)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2327)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2327
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.209"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(211..324)
                     /locus_tag="WHR07_001962"
                     /pseudo
     CDS             complement(211..324)
                     /locus_tag="WHR07_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705522.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            464..539
                     /locus_tag="WHR07_001963"
     tRNA            464..539
                     /locus_tag="WHR07_001963"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:498..500,aa:Glu,seq:ttc)
     gene            924..1089
                     /locus_tag="WHR07_001964"
                     /pseudo
     CDS             924..1089
                     /locus_tag="WHR07_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216748.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance methyltransferase TehB"
     gene            complement(1139..1945)
                     /gene="thiD"
                     /locus_tag="WHR07_001965"
     CDS             complement(1139..1945)
                     /gene="thiD"
                     /locus_tag="WHR07_001965"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEZ2131124.1"
                     /translation="MKSSFVQTLTIAGSDSGGGAGIQADLKTFQMRGVFGTCVITAVT
                     AQNTLGVSAVHLVPTETITAQIQAIREDFDIRAYKIGMLGTAEIIECVADKLKHCDFG
                     RRVLDPVMIAKGGAPLLQDSAVAALTRLLLPDTDVLTPNLPEAEALTGVHIENRKDAE
                     RAAKILLDYGVKNVVIKGGHLNGSTSGRCTDWLFTQNETLELDSPRFPTAHTHGTGCT
                     FSACITAELAKGSDVCKAVRTAKSYITAAISNPLEIGAGHGPVNHWAYRD"
BASE COUNT          552 a          591 c          603 g          581 t
ORIGIN      
        1 aagttgcact tcaaatgcga atccgccatt atctgaaagt ttgaggttct agattcccgc
       61 tttcgcggga atgacgaaaa gtggcgggaa tgacgaagtt tcagacggca tcgcccgcct
      121 gttttgatat ggcggcaccc cccccgacaa aaaaaaacaa tccggaacgc atctgaccgt
      181 tccggcttgt tttcaggcga atccgccgca tcagaacata ctgcgcacgc ccatattgac
      241 ctgccaagtc tggcgcatcg tgtgcatcga agacctttgc gcctcaaaat aaagctgcct
      301 tccgttgtcg gcattaccac gcaaaaaaat gaattgcttg atattccaat gttttttata
      361 tgtttttata ttgtgatgcg atcagacaaa cgcccccctg acatttgttt agacggcatc
      421 gtattgctaa atttctataa gtatgtataa tgtccgtttc cacgcgccca tcgtctagag
      481 gcctaggaca ctgccctttc acggcggcaa ccggggttcg aatccccgtg ggcgtgccaa
      541 ttcaaaaacc tgcttgtttc aagcaggttt ttttattatg aatcgtcatt cccgcaccct
      601 tcgtcattcc cgcgaaagcg ggaatctgga gcgcaggatt aaagaaaccg ttttatccga
      661 taagcttccg tgccgacagg tctggattcc cgcctgcgcg ggaaggacgg cagagggtgg
      721 acgatgccgt ctaaagcctg acaaggcatt tgatgccgtc tgaaacttcg tcattcccgc
      781 acccttcgtc attcccgcaa aagcgggaat ctagagcgta gggttgaaga aaccgtttta
      841 tccaataagt ttccgtgccg acaggtctgg attcccactt tcgtgggaat gacgagtctt
      901 ttataacctg agacctttgc aaaatgcctt tcccttttaa atttaaagag gggggagctg
      961 aaggattatt atcgggattg ggagctggtc gaatataaag aagaattggg cgcgatgcac
     1021 gccaaagacg aaaacggcaa tccgatacgg tttaaatttg taaccatgct ggcgaaaaag
     1081 cctgaataat cctcaaaaat gccgtctgaa cattttgttt cagacggcat ttttacgtct
     1141 agtcccgata cgcccaatga ttgaccgggc cgtgtcccgc gccgatttcc aaagggtttg
     1201 agattgccgc cgtaatgtag gacttggcag tccgtacggc tttgcaaacg tccgagcctt
     1261 ttgccaactc ggcggtgatg caggcggaaa acgtgcagcc cgtgccgtgc gtgtgggcgg
     1321 ttggaaagcg cgggctgtcc aattccagcg tttcattttg cgtaaacagc caatccgtgc
     1381 agcgtccgct tgtgctgccg ttcaaatgtc cgcctttgat aacgacattt ttgacaccgt
     1441 aatcaagcag gatttttgcc gcacgttccg catctttacg gttttcgata tgcacgccgg
     1501 tcagggcttc cgcctcgggc aggttggggg tcaatacatc cgtatcggga agcagcaggc
     1561 gcgtcagtgc cgcaacggcg gaatcctgca acagcggcgc accgcctttg gcaatcatca
     1621 cagggtcgag tacgcgcctg ccgaagtcgc agtgtttcag cttgtcggca acgcattcga
     1681 tgatttccgc cgtgccgagc attcctattt tgtaggcgcg gatgtcaaag tcttccctga
     1741 ttgcttggat ttgtgcggtg atggtttcgg tcgggacgag atgaaccgcc gacacgccca
     1801 aggtattttg cgcggtaacg gcggtgatga cgcacgttcc gaacacgccg cgcatctgaa
     1861 acgttttcaa atccgcctga atgcccgcac cgccgcccga atccgaaccg gcgatggtaa
     1921 gcgtttgcac aaaagagctt ttcatttgtt cctccttaat attgtgtccg ataaaaaggg
     1981 ctaatgcctg taaaaaagca cggcgatgcc gtctgaaaac cgcagcgcgg ggtttgtggt
     2041 gcattatatg ccgtattgca ggacaaggca cagggcaggg cggcggggtg catcgtagca
     2101 actgtatttt tgcccgacgg ggtgaaaaat acagttgcta cacccactga taatgaaaaa
     2161 agagagcaat gccgtctgaa ccgcgtgttg cggcgagcat aaaccggcac gctttattcg
     2221 tcattcccac aaaaacagaa acctaaaatt ccgtcattcc tacgaaagcg ggaatccagt
     2281 gtgttcggtt tcagttgttt ttgggtttcg ggtgatttcc aaatcga
//
LOCUS       DAWGKF010000210         2314 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.210, whole genome shotgun sequence.
ACCESSION   DAWGKF010000210 DAWGKF010000000
VERSION     DAWGKF010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2314
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.210"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..332
                     /locus_tag="WHR07_001966"
     CDS             <1..332
                     /locus_tag="WHR07_001966"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131125.1"
                     /translation="NPHHRHSRAGGNPKTQRNRNLSEKTETPPTVIPAKAGIQQHNAA
                     GIYRKKQKPPPTVIPAKAGIQQPKNHRNLSAKTETPTAVIPAKAGIQTRRHGNLPNKT
                     VSLDSTS"
     gene            477..2246
                     /locus_tag="WHR07_001967"
     CDS             477..2246
                     /locus_tag="WHR07_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA family autotransporter adhesin"
                     /protein_id="HEZ2131126.1"
                     /translation="MNKIYRIIWNSALNAWVVVSELTRNHTKRASATVATAVLATLLS
                     ATVQANATDTDEDEELESVVRSALVLQFMIDKEGNGEIESTGDIGWSIYYDDHNTLHG
                     ATVTLKAGDNLKIKQSGKDFTYSLKKELKDLTSVETEKLSFGANGNKVNITSDTKGLN
                     FAKETAGTNGDPTVHLNGIGSTLTDTLAGSSASHVDAGNQSTHYTRAASIKDVLNAGW
                     NIKGVKTGSTTGQSENVDFVRTYDTVEFLSADTKTTTVNVESKDNGKRTEVKIGAKTS
                     VIKEKDGKLVTGKGKGENGSSTDEGEGLVTAKEVIDAVNKAGWRMKTTTANGQTGQAD
                     KFETVTSGTKVTFASGNGTTATVSKDDQGNITVKYDVNVGDALNVNQLQNSGWNLDSK
                     AVAGSSGKVISGNVSPSKGKMDETVNINAGNNIEITRNGKNIDIATSMTPQFSSVSLG
                     AGADAPTLSVDDEGALNVGSKDANKPVRITNVARGVKEGDVTNVAQLKGVAQNLNNRI
                     DNVDGNARAGIAQAIATAGLAQAYLPGKSMMAIGGGTYRGEAGYAIGYSSISDTGNWV
                     IKGTASGNSRGHFGTSASVGYQW"
BASE COUNT          709 a          574 c          576 g          455 t
ORIGIN      
        1 gaaaccctca ccaccgtcat tcccgcgcag gcgggaatcc aaaaacgcaa cgcaacagga
       61 atttatcaga aaaaacagaa accccaccga ccgtcattcc cgcaaaagcg ggaatccagc
      121 aacacaacgc agcaggaatt tatcggaaaa aacagaaacc cccaccgacc gtcattcccg
      181 caaaagcggg aatccagcaa ccgaaaaacc acaggaatct atcagcaaaa acagaaaccc
      241 ccaccgccgt cattcccgca aaagcgggaa tccagacccg tcggcacgga aacttaccga
      301 ataaaacagt ttccttagat tccacgtcct agattcccgc cttcgcggga atgacgagat
      361 tttaagttgg gggaatttat cagaaaaccc ccaaccccca aaaaccgggc ggatgccgca
      421 ccatccgccc ccaaaccccg atttaaccat tcaaacaaac caaaagaaaa aacaaaatga
      481 acaaaatata ccgcatcatt tggaatagtg ccctcaatgc ctgggtagtc gtatccgagc
      541 tcacacgcaa ccacaccaaa cgcgcctccg caaccgtggc gaccgccgta ttggcgacac
      601 tgctgtccgc aacggttcag gcgaatgcta ccgataccga tgaagatgaa gagttagaat
      661 ccgtagtacg ctctgctctg gtgttgcaat tcatgatcga taaagaaggc aatggagaaa
      721 tcgaatctac aggagatata ggttggagta tatattacga cgatcacaac actctacacg
      781 gcgcaaccgt taccctcaaa gccggcgaca acctgaaaat caaacaaagc ggcaaagact
      841 tcacctactc gctgaaaaaa gagctgaaag acctgaccag tgttgaaact gaaaaattat
      901 cgtttggcgc aaacggtaat aaagtcaaca tcacaagcga caccaaaggc ttgaattttg
      961 cgaaagaaac ggctgggacg aacggcgacc ccacggttca tctgaacggt atcggttcga
     1021 ctttgaccga tacgcttgcg ggttcttctg cttctcacgt tgatgcgggt aaccaaagta
     1081 cacattacac tcgtgcagca agtattaagg atgtgttgaa tgcgggttgg aatattaagg
     1141 gtgttaaaac tggctcaaca actggtcaat cagaaaatgt cgatttcgtc cgcacttacg
     1201 acacagtcga gttcttgagc gcagatacga aaacaacgac tgttaatgtg gaaagcaaag
     1261 acaacggcaa gagaaccgaa gttaaaatcg gtgcgaagac ttctgttatt aaagaaaaag
     1321 acggtaagtt ggttactggt aaaggcaaag gcgagaatgg ttcttctaca gacgaaggcg
     1381 aaggcttagt gactgcaaaa gaagtgattg atgcagtaaa caaggctggt tggagaatga
     1441 aaacaacaac cgctaatggt caaacaggtc aagctgacaa gtttgaaacc gttacatcag
     1501 gcacaaaagt aacctttgct agtggtaatg gtacaactgc gactgtaagt aaagatgatc
     1561 aaggcaacat cactgttaag tatgatgtaa atgtcggcga tgccctaaac gtcaatcagc
     1621 tgcaaaacag cggttggaat ttggattcca aagcggttgc aggttcttcg ggcaaagtca
     1681 tcagcggcaa tgtttcgccg agcaagggaa agatggatga aaccgtcaac attaatgccg
     1741 gcaacaacat cgagattacc cgcaacggca aaaatatcga catcgccact tcgatgaccc
     1801 cgcaattttc cagcgtttcg ctcggcgcgg gggcggatgc gcccacttta agcgtggatg
     1861 acgagggcgc gttgaatgtc ggcagcaagg atgccaacaa acccgtccgc attaccaatg
     1921 tcgcccgggg cgttaaagag ggggatgtta caaacgtcgc acaacttaaa ggtgtggcgc
     1981 aaaacttgaa caaccgcatc gacaatgtgg acggcaacgc gcgcgcgggt atcgcccaag
     2041 cgattgcaac cgcaggtttg gctcaggcct atttgcccgg caagagtatg atggcgatcg
     2101 gcggcggtac ttatcgcggc gaagccggtt acgccatcgg ctactcgagc atttctgaca
     2161 ctgggaattg ggttatcaag ggcacggctt ccggcaattc gcgcggtcat ttcggtactt
     2221 ccgcatctgt cggttatcag tggtaagggc tttttcgcct gtctgctgtt ggggcaggcg
     2281 gaaggtttga agggaagggt ggcgatttgc cgcc
//
LOCUS       DAWGKF010000211         2309 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.211, whole genome shotgun sequence.
ACCESSION   DAWGKF010000211 DAWGKF010000000
VERSION     DAWGKF010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2309)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2309)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2309
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.211"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..569)
                     /locus_tag="WHR07_001968"
     CDS             complement(<1..569)
                     /locus_tag="WHR07_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEZ2131127.1"
                     /translation="MEHKLPQLPYELDALSPHLSKETLEFHYGKHHQTYITNLNNQIK
                     GTEFENLPLEEIVKKSSGGVFNNAAQTWNHTFYWLGFTSKGQGKPAGELAAAIDAKWG
                     SFEKFQEAFNACAAGTFGSGWAWLVKTPAGGLDLVSTSNAATPLTTENTPLLTCDVWE
                     HAYYIDYRNSRPNYLKGFWEIVNWDEVAKR"
     gene            731..2137
                     /gene="dnaB"
                     /locus_tag="WHR07_001969"
     CDS             731..2137
                     /gene="dnaB"
                     /locus_tag="WHR07_001969"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEZ2131128.1"
                     /translation="MNDYTAMPSEDREIGALSLPPHSMEAEQSVLGGLMLENPAWDRI
                     ADVVSGEDFYRHEHRLIFRSIAKLINESRPADVITVQEDLQRNEELEAAGGFEYLITL
                     AQNTPSAANIRRYAEIVRERSIMRQLAEVGTEIARSAYNPQGRDAGQLLDEAENKVFQ
                     IAESTAKSKQGFLEMPDLLKEVVQRIDMLYSRDNPDEVTGVPTGFIDLDKKTSGLQPG
                     DLIIVAGRPSMGKTAFSINIAEHVAVEGKLPVAVFSMEMGGAQLVMRMLGSVGRLDQS
                     VLKTGRLEDEHWGRLNEAVVKLSDAPVYIDETPGLTALELRARARRLARQFNNKLGLI
                     VIDYLQLMAGSGRSDNRASELGEISRSLKALAKELQVPIIALSQLSRTVESRTDKRPM
                     MSDLRESGAIEQDADLIMFMYRDEYYNQDSPMKGLAECIIGKHRNGPVGKIFLTWTGQ
                     FTKFDNAAYIPEEAKIED"
BASE COUNT          564 a          596 c          621 g          528 t
ORIGIN      
        1 cgtttggcga cttcgtccca gttgacgatt tcccaaaaac ctttcaggta gttggggcgg
       61 ctgttgcggt agtcgatgta gtaggcgtgt tcccacacgt cgcaggtcag cagcggcgtg
      121 ttttcagtgg tcagcggcgt agcggcgttg gaagtagaaa ccaaatccaa tccgccggca
      181 ggggttttta ccagccacgc ccaaccggag ccgaaagtac cggccgcgca ggcattgaac
      241 gcttcttgga atttctcgaa gctgccccat ttcgcgtcga tggcggcggc cagttcgccg
      301 gcaggtttgc cttgaccttt ggacgtgaaa cccagccagt agaaggtgtg gttccaagtt
      361 tgtgccgcgt tgttgaacac gccgcccgaa gattttttca caatctcttc caaaggcagg
      421 ttttcaaatt cggtgccttt gatttgattg ttcaggttgg tgatgtaggt ttgatggtgt
      481 ttgccgtagt ggaattccaa agtctctttg ctcagatgcg gggacaatgc gtccagttca
      541 taaggcagtt gcggcagctt atgttccatt ttgtgctcct aatattgttt taaatgttgt
      601 attttggcag tgtgctgcaa atagctcagc agcgcacata ttttacctgt tttgagggat
      661 ggaaaccaat taaacctgct ttacgctata atagaagatt gcaatttcgg cacgacagat
      721 aggatgtacc atgaacgatt acacagccat gccgtctgaa gaccgtgaga tcggcgcatt
      781 gtcgctgcct ccacattcga tggaggcgga acaatccgtt ttgggcgggt tgatgctgga
      841 aaatccggca tgggacagga ttgccgatgt ggtttcggga gaggatttct accggcatga
      901 acaccgcctg attttccgat ccattgccaa attgattaat gagagccgtc ccgccgatgt
      961 gattacggtt caggaagatt tgcagcggaa cgaagaattg gaagcggcag gcggattcga
     1021 atatctgatt acgctggcgc aaaacacccc gtctgccgcc aacatccgcc gctacgccga
     1081 aatcgtgcgc gagcgttcca tcatgcgcca actcgccgaa gtggggacgg aaatcgcccg
     1141 cagcgcatac aatccgcaag gcagggacgc ggggcagctt ttggacgagg cggaaaacaa
     1201 agtattccaa atcgccgaaa gcacggccaa atccaagcag ggctttttgg agatgcccga
     1261 tttgctgaaa gaagtcgtac agcgcatcga tatgctctac tcgcgcgaca atcccgatga
     1321 agttaccggc gtgccgacgg ggttcatcga cctcgacaaa aaaacctcgg gtctgcaacc
     1381 cggcgacctg attatcgtcg ccggtcgtcc ttctatgggt aagaccgcct tttccatcaa
     1441 tattgccgaa cacgttgccg tagaaggcaa gctgcccgtt gccgtctttt cgatggagat
     1501 gggcggtgcg caactggtca tgcgtatgct cggctcggtc ggacggctgg atcaaagcgt
     1561 tttgaaaacc ggcaggctcg aagacgaaca ctggggtcgc ctgaacgaag cagtcgtcaa
     1621 actctccgac gcgcccgtgt acatcgacga gaccccgggt ttgactgcgc tcgaactgcg
     1681 cgcccgcgcc cgccgtctcg cccgtcaatt taacaataag ctgggattga tcgtcatcga
     1741 ctacctgcaa ctgatggcgg gatccggccg ttccgacaac cgagcttcag agctgggcga
     1801 aatttcacgt tcgctcaaag cgttggcgaa agaattgcaa gtccccatca tcgccctgtc
     1861 gcaactgagc cgcacggtcg aatcgcgtac cgacaaacgc cccatgatgt ccgaccttcg
     1921 cgagtccggc gcaatcgagc aggatgccga cctgattatg ttcatgtacc gcgacgaata
     1981 ctacaaccag gactcaccca tgaaaggcct tgccgaatgt atcatcggca aacaccgcaa
     2041 cggtcccgtc ggtaaaatct tcctcacatg gacgggacaa ttcaccaaat tcgacaatgc
     2101 tgcctatatt cccgaggagg caaagataga ggattaaatg gctatataaa aatttattag
     2161 gcgaaatcag gcaaaatcgt ttaaaatcat gctgagagat tgccctaaaa aataaaacgc
     2221 ggtcttgagg catttttgca ttcagcccgc atataattga aaatatagtg gattaacaaa
     2281 aatcaggaca aggcaacgaa gccgcagac
//
LOCUS       DAWGKF010000212         2203 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.212, whole genome shotgun sequence.
ACCESSION   DAWGKF010000212 DAWGKF010000000
VERSION     DAWGKF010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2203
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.212"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            27..572
                     /locus_tag="WHR07_001970"
     CDS             27..572
                     /locus_tag="WHR07_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEZ2131129.1"
                     /translation="MGKTVTLTSGHSNTDPGAVNGSDREADLAQDMCNIVAAILRDDY
                     GLTVKTDGTGKGNMPLREAVKLIRGSDVAIEFHTNAAVSKAATGIEALSTVKNKRWCQ
                     VLSKAVAKKTGWKLRGEDGFKPDNAGQHSRLAYAQAGGIVFEPFFISNDTDLALFKTT
                     KWGICRAIADAIAMELGAARV"
     gene            569..775
                     /locus_tag="WHR07_001971"
     CDS             569..775
                     /locus_tag="WHR07_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131130.1"
                     /translation="MNIIGKLKEAASYFLTKLIGENPSNEQVNRALIQMPNVRPIHTY
                     PRPNLRNSGVAAAKRAARKRKNRR"
     gene            778..942
                     /locus_tag="WHR07_001972"
     CDS             778..942
                     /locus_tag="WHR07_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131131.1"
                     /translation="MGQVAFYEKMIGLWSAKSREASEQADLAAFEFAEGELANYQEML
                     KRHLQTKSVE"
     gene            977..1267
                     /locus_tag="WHR07_001973"
                     /pseudo
     CDS             977..1267
                     /locus_tag="WHR07_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215784.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            1164..1469
                     /locus_tag="WHR07_001974"
     CDS             1164..1469
                     /locus_tag="WHR07_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131132.1"
                     /translation="MSLLKTVKMQATVVLTALAITACSSTSAPSATEIKVVEKAVMPT
                     PPAALMVAPVRPNPPKDGKTATLLEHAAEFGGYVAELENQNQAWRDWAGNHSRKVGN"
     gene            complement(1514..1684)
                     /locus_tag="WHR07_001975"
     CDS             complement(1514..1684)
                     /locus_tag="WHR07_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YegP family protein"
                     /protein_id="HEZ2131133.1"
                     /translation="MYFEIYKDAKGEYRWRLKAANHEIIAQGEGYTSKQNCQHAVDLL
                     KSTTAATPVKEV"
     gene            1697..1915
                     /locus_tag="WHR07_001976"
     CDS             1697..1915
                     /locus_tag="WHR07_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131134.1"
                     /translation="MNEYTFSYRFNGKSWSLSIWADNPEEARAKFRAARENAHYDGEV
                     VAKVYTFVNISWVKKLYKRTKYLMGIKE"
     gene            1912..2154
                     /locus_tag="WHR07_001977"
     CDS             1912..2154
                     /locus_tag="WHR07_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131135.1"
                     /translation="MTYRELVERQLAVRHADLELGLSRAREQEPFVIHVSDLLDKAGI
                     EYAVRMDKDFQTTFCVAFSATAPADVIGILRKYYSV"
BASE COUNT          591 a          504 c          611 g          497 t
ORIGIN      
        1 caatcaatat tttttggaga tgatgaatgg gcaaaaccgt aaccttaacc tctggacaca
       61 gcaacaccga cccgggtgcg gtcaacggca gcgaccgtga ggcggacttg gcgcaggata
      121 tgtgcaatat cgtggctgct attttgcgcg atgactacgg tttgactgtt aaaaccgacg
      181 gcacgggcaa aggcaatatg ccgctgcgtg aagcggtcaa gctgattcgc ggctcggatg
      241 tggcgattga gtttcacacc aacgctgccg tcagcaaagc ggcgacaggc atcgaagcct
      301 tgagtaccgt taaaaacaaa cgctggtgtc aggtgttgag caaagccgtt gccaagaaaa
      361 ccggctggaa actgcgcggc gaagacggct ttaaacccga caatgcgggc cagcattcgc
      421 gcctggctta tgcacaagcc ggcggcattg tgtttgagcc ttttttcatc agcaacgaca
      481 ctgatttggc cttgtttaag acgactaaat ggggcatctg ccgcgcgatt gcggacgcga
      541 ttgcgatgga attgggggcg gcaagagtat gaatattatt ggtaaattga aagaagctgc
      601 ttcctatttt cttacaaaat tgattggaga aaatcctagt aatgagcagg taaaccgcgc
      661 acttatacag atgccaaatg ttcgtccgat acacacctat ccacgcccaa atttaagaaa
      721 ctcaggcgtg gcagccgcaa aacgggcggc gcgtaaacgc aagaatcgtc gttaatcatg
      781 ggacaggttg cgttttacga aaagatgatt gggctgtggt cggccaaaag ccgtgaggca
      841 agcgaacagg cagacttggc ggcgtttgaa tttgcggagg gcgaactggc caattatcag
      901 gaaatgctga aacggcacct gcaaaccaaa agtgtggaat agcaatgcgt attttggata
      961 tttttaaaaa cccagcgaca ggcaggaaaa agacaaagcg caagccctgc tgttgtcggc
     1021 tcaaaactac gcccgcgaac tggaacaggc gcgcgcggaa gcgaaaaaat atgaagtcaa
     1081 ggcgcacgcc gtcggcatgg ctttggcgaa aaaacaggcg gaagtcagcc gtctgaaaac
     1141 ggaaaataaa aaggaaatcg aaaatgtcct tactcaagac cgtaaaaatg caggcgacgg
     1201 ttgtattgac ggctttggcc atcacggctt gcagctctac aagcgcgccc tcggctacgg
     1261 aaattaaggt tgtcgaaaag gcggtcatgc cgacaccgcc tgccgcattg atggtcgcgc
     1321 cggtacgccc aaatccgccg aaagacggca agacggccac gctgttggaa cacgccgccg
     1381 agtttggcgg ctatgtggcg gagttggaaa atcaaaatca ggcttggcgc gactgggcgg
     1441 gcaatcactc ccgcaaagtc ggaaactgac aaaaaagccc gcgtagggcg cgggctgagg
     1501 gtgaaagcgg attttatacc tcttttacag gggtagcggc ggtagtgctt ttcagcaaat
     1561 cgactgcgtg ctgacagttt tgcttgctgg tgtagccttc gccctgagcg atgatttcat
     1621 ggttggctgc tttcaaacgc caacggtatt cgccttttgc gtctttatag atttcaaaat
     1681 acataaggtt tctcctatga atgagtacac gttttcttac cgctttaacg gcaagtcctg
     1741 gtcattgagc atttgggcgg acaaccctga agaagccagg gcgaaatttc gggctgcacg
     1801 agaaaatgcg cactatgacg gcgaagttgt agcaaaggtt tatacatttg taaatatttc
     1861 gtgggttaag aaattgtaca agcggacaaa atatttaatg ggtatcaaag aatgacctac
     1921 cgtgaattag ttgaacgtca gttggctgtg cgccatgccg atttggaatt gggcttaagc
     1981 cgcgcacgcg agcaagagcc gtttgtcatt catgtttccg atctgttgga taaggcaggc
     2041 attgagtacg cggtacgcat ggataaggat tttcagacga ccttttgtgt ggcgttttct
     2101 gcgaccgccc ctgctgatgt gattggtatt ttacggaaat attactcagt ctgagacctt
     2161 tgcaaaattc ctttccctcc cgacagccga aacccaaaca cag
//
LOCUS       DAWGKF010000213         2108 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.213, whole genome shotgun sequence.
ACCESSION   DAWGKF010000213 DAWGKF010000000
VERSION     DAWGKF010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2108)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2108)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2108
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.213"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(42..365)
                     /locus_tag="WHR07_001978"
     CDS             complement(42..365)
                     /locus_tag="WHR07_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEZ2131136.1"
                     /translation="MDMVVRGGIYLVSLDPTVGSEIKKTRPCVVVSPPEIHNYLKTVL
                     IVPMTSGSRPAPFRVNVRFQDKDGLLLPEQIRAVDKARLVKHLGNLDNSTAEKLFAVL
                     QEMFA"
     gene            complement(353..592)
                     /locus_tag="WHR07_001979"
     CDS             complement(353..592)
                     /locus_tag="WHR07_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="growth regulator"
                     /protein_id="HEZ2131137.1"
                     /translation="MILNIRKMGNSQGVILPKSLLGQIGAVDSLAVTVEKGNIILSCP
                     TVRRGWAEAAAMLVETEQEHFFSEIENEADKEWIW"
     gene            complement(715..1512)
                     /gene="truA"
                     /locus_tag="WHR07_001980"
     CDS             complement(715..1512)
                     /gene="truA"
                     /locus_tag="WHR07_001980"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEZ2131138.1"
                     /translation="MDTAQKQRWAITLSYDGSRFYGWQKQADGVPTVQAALETALAQI
                     AGEAVSTTVAGRTDTGVHATAQVVHFDTTAARPQQAWVRGVNAHLPEGIAVLHARQVA
                     PEFHARFDAYGRHYRYLLESAPVRSPLLKNRAGWTHLKLDIEPMRRAAAYLIGEQDFS
                     SFRAAECQAKSPVKTIYRADLTQSSGLVRLDLHGNAFLHHMVRNIMGALVYVGSGRLS
                     VEGFAALIQERSRLKAPPTFMPDGLYLTGVDYPEAYGIIRPQIPEWL"
BASE COUNT          485 a          495 c          589 g          539 t
ORIGIN      
        1 ttaatccact ataatgaaca caatcaattc agactattca atcaggcaaa catctcctgc
       61 aatactgcaa acagtttttc agccgtactg ttgtctaaat ttccaagatg cttgaccaat
      121 ctggctttat ccacagccct aatctgttcg ggcaaaagca aaccgtcttt atcctgaaag
      181 cggacattga cgcggaacgg ggcaggacgg cttccgctcg tcataggaac gatcagcaca
      241 gtcttgagat agttgtgtat ttcaggagga gatactacga cacaaggacg tgtctttttg
      301 atttcgcttc ctacggtcgg gtctaaggag accagataga ttccgccgcg tactaccata
      361 tccattcttt atccgcttcg ttttcaattt cggaaaaaaa atgctcctgc tcggtttcga
      421 caagcattgc ggcagcttct gcccatcccc tgcgaacggt aggacagctt aaaatgatat
      481 tgcccttttc aactgtaaca gccaagctgt ctactgcccc tatttgaccc aataatgatt
      541 tgggcagaat cacgccttgc gagtttccca ttttgcgtat gttgagaatc atatacgtac
      601 catattcacc agtttatgta ataacaatgt tagtaccttg atgaggtagt gtcaacattg
      661 aaaaagattg cctgacagtt tgtccgattt caaaatctcc gcgacaagaa tgttttaaag
      721 ccattcgggg atttgggggc ggatgatgcc gtatgcctcg ggatagtcga cgccggtcag
      781 gtaaagcccg tcgggcataa aggtcggtgg ggctttgagg cggctgcgtt cttgaatcag
      841 tgcggcgaag ccttcgacgc tgagtctgcc gctgccgaca taaacgagcg cgcccatgat
      901 gttgcgtacc atgtggtgca aaaaggcgtt gccgtgcaaa tcgaggcgga cgagtcctga
      961 gctttgggta aggtcggcgc ggtagatggt tttgacgggg gattttgctt ggcattcggc
     1021 ggcgcggaag ctggagaagt cttgttcgcc gatcaaatag gcggcagccc gacgcatcgg
     1081 ttcgatgtcg agtttgaggt gtgtccagcc tgccctgttt ttgagcaggg gggaacggac
     1141 gggtgcggat tcgagcaggt agcggtagtg ccgtccgtat gcgtcaaatc gtgcatgaaa
     1201 ttcgggggcg acctgtcggg cgtgcaaaac ggcaatgcct tcgggcaggt gggcatttac
     1261 gccgcgcacc catgcctgtt ggggacgggc ggcagttgtg tcgaagtgga cgacttgggc
     1321 ggtggcatgc acgccggtgt cggtcctgcc ggcaacggtg gtggaaaccg cttcccctgc
     1381 tatttgggcg agcgcggttt ccaatgccgc ctgaacggtc ggtacgccgt cagcctgttt
     1441 ctgccagccg taaaagcggc tgccatcata ggatagggtt attgcccagc gttgtttttg
     1501 tgcggtatcc atcggatttg ggattcggat aaatgttcag actgcattgt atcgcagatt
     1561 ttgcagggaa acggcaaatg cccggggcgc gcggcgttgt ttggggagtt ggggggggga
     1621 tgcagttgct acgaatcgct atcctgtgaa ttcaccctgt caggagtgcc cgaatcgtca
     1681 ttcccgcgca gtcgggaatc taggacgtaa aatctaaaga aaccatttta tagtggatta
     1741 acaaaaacca gtacggcgtt gcctcgcctt agctcaaaga gaatgattct ctaaggtgct
     1801 gaagcacgag tgaatcggtt ccgtattatt tgtactgtct gcggcttcgt cgccttgtcc
     1861 tgatttttgt taatccacta tatccgataa gtttccgcac cgacaaaact agattcccac
     1921 tttcgtggga atgacgggat gcaggttcgt gggaatgacg cgaacagaaa cctcaaatcc
     1981 cgtcattccc gcgcaggcgg gaatctagac cttagaacaa cagcaatatt caaagattat
     2041 ctgaaagtct gggattctgg attcccactt tcgtgggaat gacggaatgc aggttcgtag
     2101 gcatgacg
//
LOCUS       DAWGKF010000214         2056 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.214, whole genome shotgun sequence.
ACCESSION   DAWGKF010000214 DAWGKF010000000
VERSION     DAWGKF010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2056)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2056)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2056
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.214"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(83..1162)
                     /gene="aroB"
                     /locus_tag="WHR07_001981"
     CDS             complement(83..1162)
                     /gene="aroB"
                     /locus_tag="WHR07_001981"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEZ2131139.1"
                     /translation="MKTLTVHTPSHSYPIFIGNGLLPQAGSLLKPHLGKRAAIITNET
                     VAPLYLHTLQTALDAAGVSHFSIILPDGEAYKNWQTLNLIFDGLMQHRAERKTTLIAL
                     GGGVIGDMVGFAAATYQRGAPFIQIPTTLLSQVDSSVGGKTAINHPLGKNMIGAFYQP
                     QAVLADLDTLHTLPARELSAGMAEVIKYGTLGDISFFEWLEQHMPELMALERAPLIQA
                     VYRCCQMKADIVAQDETEQGIRAWLNLGHTFGHAIETEMGYGTWLHGEAIAAGCVLAA
                     RLSEQLGKTSAADTARLAALLEAAGLPSAPPVFAFEKWLEHMSHDKKVSGGIMRFIGL
                     NRLGEANITEITDTDILRRTLQPYL"
     gene            complement(1242..1754)
                     /locus_tag="WHR07_001982"
     CDS             complement(1242..1754)
                     /locus_tag="WHR07_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEZ2131140.1"
                     /translation="MKNFNGKLILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA
                     GVPIPTIFEMEGEQGFRSRETAILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVV
                     YLHAPPEILLERTRCDNSRPLLQVADPLEKLRELYAARDPVYRQTADFTVESANCRET
                     VQTLLKRLSR"
BASE COUNT          404 a          493 c          657 g          502 t
ORIGIN      
        1 ggattcccgc ttttacggag aaagatgatg gaaaatcatc atcgtgcgtc aaacccgcgc
       61 ggcagcacat cggcagagga aatcagagat acggttgcag ggtgcggcgg aggatgtccg
      121 tgtcggtaat ttcggtgatg ttggcttcgc ccagccggtt cagaccgata aagcgcatga
      181 tgccgccgct gactttttta tcgtggctca tatgttcgag ccatttttca aaggcaaaca
      241 cgggcggtgc ggacggcagt ccggcggctt cgagcagggc ggcgagccgc gcggtatctg
      301 cggcggaggt tttgcccagt tgttcggaca aacgcgccgc caacacgcag ccggcggcga
      361 tggcttctcc atgcagccaa gtgccgtaac ccatctcggt ttcaatggcg tgtccgaagg
      421 tgtgtccgag gttgagccat gcgcgtatgc cctgttcggt ttcgtcttgg gcgacgatgt
      481 ctgccttcat ttggcaacag cggtacacgg cttggatgag gggcgcgcgt tcgagtgcca
      541 tcagttcggg catatgctgt tccagccatt caaaaaaact aatgtcgccg agcgtgccgt
      601 atttgatgac ttccgccata ccggcggaca gttcgcgggc gggcagggtg tgcagcgtgt
      661 ccaagtcggc aagcaccgcc tgcggctggt agaacgcgcc gatcatattt ttgccgagcg
      721 ggtggttgat ggcggttttg ccgccgacgg aggaatcgac ctgactcaac agtgtggtcg
      781 gtatttggat gaacggagcc ccacgctggt aggtggcagc ggcaaagccg accatgtcgc
      841 cgataacgcc gccgcccagc gcgattaatg tggttttgcg ttcggcgcgg tgttgcatca
      901 gaccgtcaaa gatgaggttg agcgtctgcc agtttttgta cgcctcgccg tcgggcagga
      961 tgatgctgaa atgggacacg cctgccgcgt ccaatgccgt ctgaagcgtg tggagataaa
     1021 gcggggcgac ggtttcgtta gtgatgatgg cggcgcgttt gcccaaatgc ggtttgagca
     1081 ggctgcctgc ctgcggcagc agcccgttgc cgataaagat ggggtagctg tgggacgggg
     1141 tgtgtacggt cagtgttttc attgttgttc cttaaagttt gaaccgccgg cccgccgggc
     1201 ggggcgcggt ttggtttttt gggcggggcg catatgccgg tttatcggga taagcgctta
     1261 agcagggttt gcacggtttc ccggcagttt gccgattcta cggtaaagtc ggcagtttgg
     1321 cggtaaacgg ggtcgcgtgc ggcgtagagt tcgcgcaatt tctccaaagg atcggcaact
     1381 tgtaaaaggg ggcggctgtt gtcgcagcgc gtgcgttcga gcaggatttc gggcggggcg
     1441 tgcagataga cgaccgtgcc gcttttgcgg ataagggcgc ggttttcttc ttttaacacc
     1501 gcgccgccgc cggtggacag gacgatatgg ggcaggataa ccagcttttt gagtatggcg
     1561 gtttcgcgcg aacggaatcc ctgttcgcct tccatttcaa atatggtggg gatgggaacg
     1621 ccggcggctg cggcgatttc gtgatcgctg tcgtaaaaac ggtaatccag ccgctgcgcc
     1681 atttgccggc ccagcgtggt tttgcccgcg cccatcagtc cgatgaggat gagtttgccg
     1741 ttaaagtttt tcatcacaat tccttaatgt ttgacacccc gcctttcggg gcgacagggt
     1801 tcgggcttgt cgggttacgg cggaatttta tacgaaatcg gcagggcggc ggtacgtttg
     1861 gaaaaataac ccgaccatcc cgaacctttc tgattttaag gaaaaataaa agaaatcagg
     1921 gaggtttttt atttcaggct gtgttttgac aatccgttga tttcacttat ttgtcaggaa
     1981 aaggcaatta tctttgctta ggtaaacaat tatccaattg aatatattga agataatatg
     2041 tttatcaata ctatag
//
LOCUS       DAWGKF010000215         2038 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.215, whole genome shotgun sequence.
ACCESSION   DAWGKF010000215 DAWGKF010000000
VERSION     DAWGKF010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2038)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2038)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2038
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.215"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            305..1762
                     /locus_tag="WHR07_001983"
     CDS             305..1762
                     /locus_tag="WHR07_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ2131141.1"
                     /translation="MSRHPAPTGEKTFFGHPFQLSTLFHIELWERFSFYGMQGILLIY
                     LYYTADKGGLGIDKTLAGGIVGAYSGSVYLSTILGAWFADRVWGAEKTLFLSGIVVML
                     GHIVLAAAPGLYGLLIGLIFIALGSGGVKSTASSMVGALYEQDEMRPLRDAGFSIFYI
                     AINIGGFLGPLLTGLLQENIGFHYGFGAAAVGMAFGLWRYSLGRKNLPHPTVPHPLSK
                     GQGKTAAAVGITLIAALATAIKTGLVNLDNFSGILLSTVILAVIAYFARLLTNPRVSS
                     DNKRHIIAYIPLFLTICMFWAVWFQIYTVATVYFDETVNRTIGSFTVPVAWKDSMQSL
                     WVILFSGLMAAMWTKMGRKQPKTPLKFAMAVFVTGASFLGFIPFISAGTPMPIAVFAL
                     IVLAITIGELMISPIALSISTKIAPPLFKTQMVALNFLAFSLGFTLGGVLFEKCYQAG
                     DEIGFYRLLFYIGAATGFLLLLLVPKLNKMLEGTD"
BASE COUNT          470 a          599 c          464 g          505 t
ORIGIN      
        1 ctataatgcg cccttcggcg tggcggatat ataaggaagt gattttccat ctaagtaaaa
       61 accgccctat cggataagcc cttaacagaa aaggctttac ccgcgccgta tcggaacaca
      121 tcctctaaaa tacaatccgt tgaattgaaa aaaatataaa aacatccgcc cgcgaaaaac
      181 ggcagcgcgt cgtttgacaa agaatgaaaa tatcggttaa aaaccgattt tcatacaaaa
      241 aacaccgctg ccgtccgcat ccgtttcaga cggtattgag agaaaatctt ttaggagaac
      301 ctttatgtcc cggcatcccg cccccaccgg agaaaaaaca ttcttcggcc accccttcca
      361 gctttccacc ctcttccata tcgaattgtg ggaacgtttt tcattttacg gaatgcaggg
      421 catcctgctg atttacctct actacaccgc cgacaaaggc ggcttgggca tagacaaaac
      481 cctcgccggc ggcattgtcg gcgcatacag cggcagcgtg tacctgtcca ccattttggg
      541 ggcgtggttt gccgaccgag tatggggtgc ggaaaaaacc ctcttcctct cgggcatcgt
      601 cgtgatgctc ggacacatcg tccttgccgc cgccccgggc ctgtacggtc ttttaatcgg
      661 gctgatattc atcgcattgg gcagcggcgg tgtgaaatct acggccagtt ctatggtggg
      721 cgcattatac gaacaggacg aaatgcgccc gctgcgcgat gcgggatttt ccattttcta
      781 catcgccatc aacatcggcg gcttcctggg cccgctgctg accggcctgc tgcaggaaaa
      841 catcggtttc cattatggtt tcggcgcggc ggcggtcggt atggcattcg gcttgtggcg
      901 ttattccttg ggacgtaaaa acctgcccca ccccaccgtc ccccatccgc tttcaaaagg
      961 acagggcaaa actgcggccg ccgtcggcat caccctcatc gccgcacttg caaccgccat
     1021 caaaaccggg cttgtcaacc tcgacaattt ctccggcatc ctcttatcta ccgtcatcct
     1081 tgccgtcatt gcctatttcg cccgcctgct gaccaacccc cgcgtcagtt ccgacaacaa
     1141 acggcacatc atcgcctaca tcccgctttt cctgaccatc tgtatgtttt gggccgtttg
     1201 gtttcagatt tacaccgtag caaccgtcta tttcgacgaa accgtcaacc gcaccatcgg
     1261 ttcgtttacc gtgcccgtcg cctggaaaga ttctatgcaa agcctgtggg tcatcctgtt
     1321 ttccggactt atggcggcaa tgtggacaaa aatggggcgc aaacagccca aaaccccgct
     1381 gaaattcgct atggcggtat ttgttaccgg cgcgtcgttt ttgggattca tcccctttat
     1441 ttccgccggc acgccgatgc ctattgcggt tttcgcactg attgtccttg ccatcacgat
     1501 aggcgaactg atgatttccc cgattgcgct gtccatctcc accaaaatcg caccgccttt
     1561 attcaaaacc caaatggtcg cccttaattt ccttgccttt tcattaggct tcactttggg
     1621 cggcgtattg tttgaaaaat gctatcaggc gggcgacgaa atcggcttct atcggctgct
     1681 gttctacatc ggcgcagcca caggcttcct gctgctcctg ctcgtcccca aattgaacaa
     1741 aatgctcgaa ggcacagact aagtcccgcc ccgatgccgt ctgaaccctt cagacggcat
     1801 ttttccgcat aatgaaacca aaccgtttcc acccgacagg acaggctccc cccaaccgga
     1861 aggcagcctg ccgattgtca tttaaatatc tgactgattc cgtctgtttg caagggaaat
     1921 agccgtttat ttccgcttgg gcggaaaccg gttctattga gtaaaaggca ttttatccga
     1981 ctaaattagt gctgcatcaa cggaatatat agtggattaa caaaaatcag gacaaggc
//
LOCUS       DAWGKF010000216         1995 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.216, whole genome shotgun sequence.
ACCESSION   DAWGKF010000216 DAWGKF010000000
VERSION     DAWGKF010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1995)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1995)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1995
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.216"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..96)
                     /locus_tag="WHR07_001984"
     CDS             complement(<1..96)
                     /locus_tag="WHR07_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ2131142.1"
                     /translation="MRKSRLSRYKQNKLIELFVAGVTARTAAELVG"
     gene            357..1829
                     /gene="pyk"
                     /locus_tag="WHR07_001985"
     CDS             357..1829
                     /gene="pyk"
                     /locus_tag="WHR07_001985"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEZ2131143.1"
                     /translation="MNQTSRDLTRISHNTKIVATLGPGSNNVELLEDMIRVGGLNVVR
                     FNFSHGTPEFHQENARIVREAAKRAGQEIAIIADLQGPKIRVGKIAGGGIELNKGETL
                     LLDAALEGEGTREAVGLDYRDLPDDVAAGDVLWLDDGLLTLTVESVEGSRIITRVENS
                     HVLKSNKGINKRGGGLSAGALTEKDFRDLKTAIAIGCDYLAISFVKSAEDLHIARAKV
                     EEEMKGSTAVRPGLVSKIERVEAIENLDEIILAGDGIMVARGDLAVEVGHAAVPALQK
                     RMIRRARELRRFSITATQMMESMITNPVPTRAEVSDVANAVLDGTDAVMCSAETAVGA
                     YPFETVSQMAIICAAAEKEQDSLNGVAEQVEYPEAVSTNLAVAGGAVSVARAVHAKAI
                     VALTESGSTAFEISRHNITLPIFALTPSVSAQRRMAMYRGVRPLILATSTDHDTALNE
                     VETMLVEHNILHSGDQYIITSGSQMRESGSTNTLEVLRVK"
BASE COUNT          520 a          567 c          514 g          394 t
ORIGIN      
        1 gcctactaac tctgctgctg ttcttgcagt tacacctgcg acaaacagtt caatgagttt
       61 attttgttta taccggctta gacgactttt tctcataggg ataattctaa cttaatttga
      121 atttccctag ttatctagga cagtcccaaa aataaattta gcctaagtca taaaaccgtg
      181 taattttgca ccaaaaaagg cggtttgcag gtaaaatatc aaactattaa tttaaatcat
      241 atttttacag aatattccgc cgcgttcatc aaatggacat caaaccggtt ccaaatttct
      301 gtaattttgt aacaaaatac cgcaaaacac ccgattgaga ccaaaaggac tttcatatga
      361 accagacaag ccgcgatctg acccgcatca gccacaacac caaaatcgtc gccacccttg
      421 ggccgggcag caacaacgtc gaactgttgg aagatatgat ccgcgtcggc ggcctgaacg
      481 tcgtccgctt caacttcagc cacggcacgc ccgaattcca tcaggaaaac gcccgcatcg
      541 tgcgcgaagc ggcaaaacgc gccggacagg aaatcgccat cattgccgac ctgcaagggc
      601 cgaaaatccg cgtgggcaaa atcgccggcg gcggcatcga attgaacaaa ggcgaaacgc
      661 tgctactgga tgccgcgctt gaaggcgaag gcacgcgcga ggcggtcggt ttggactacc
      721 gcgacctgcc cgatgacgtt gccgcaggcg atgtcttgtg gctggacgac ggcctgctga
      781 ccctgaccgt ggaatccgtc gaaggcagca ggattatcac aagggtggaa aacagccacg
      841 tcctgaaaag caacaagggc atcaacaaac gcggcggcgg tctgtccgca ggcgcgttga
      901 ccgaaaaaga cttccgcgac ctgaaaaccg cgattgccat cggttgcgac tacctcgcca
      961 tcagctttgt gaaatccgcc gaagatttgc atatcgcgcg cgccaaagtc gaagaagaaa
     1021 tgaaaggcag cacggccgtg cgccccggtt tggtttccaa aatcgaacgc gtagaagcga
     1081 ttgaaaactt ggacgaaatc atcctcgccg gcgacggcat tatggttgcg cgcggcgact
     1141 tggcggtcga agtcggacac gccgccgtcc ccgccctgca aaaacggatg atccgccgcg
     1201 cccgcgagtt gcgccgcttc agcattacgg cgacgcaaat gatggaatcg atgattacca
     1261 accccgtacc gacccgcgcg gaagttagcg atgtggcaaa cgcggtattg gacggtaccg
     1321 atgcggtgat gtgttccgcc gaaaccgccg tcggcgcgta tccgtttgaa accgtcagcc
     1381 aaatggcgat tatctgcgcg gctgcggaaa aagagcagga ttcgctcaac ggcgttgccg
     1441 aacaggtcga gtatcccgaa gcggtcagca ccaacctggc ggttgccggc ggtgcggtca
     1501 gcgtggcgcg cgcggttcac gccaaagcca tcgtcgccct gaccgaaagc ggttcgaccg
     1561 cctttgaaat cagccgccac aacatcaccc tgccgatttt cgcgctgacc ccgagcgttt
     1621 ccgcccaacg ccgtatggcg atgtaccggg gcgtgcgccc gctgattttg gcaaccagca
     1681 ccgaccacga cacggcgtta aacgaagtcg aaaccatgct ggtggaacac aacatcctgc
     1741 attccggcga ccaatacatc attaccagcg gctcgcaaat gcgcgaatcc ggttcgacca
     1801 acacactgga agtgctgcgc gtcaaataat ccgccctgag tggaaaatgc cgtctgaagt
     1861 cgatgcccga ggcttcagac ggcattttat ttgcattccg tcaggtaaaa ccgaaaaaat
     1921 tgtgcaaatc cggcaacatc agataaaatt gagtacctat actaaagcga aacaaggcat
     1981 ttccgactgc ctttt
//
LOCUS       DAWGKF010000217         1951 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.217, whole genome shotgun sequence.
ACCESSION   DAWGKF010000217 DAWGKF010000000
VERSION     DAWGKF010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1951)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1951)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1951
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.217"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(498..1580)
                     /locus_tag="WHR07_001986"
     CDS             complement(498..1580)
                     /locus_tag="WHR07_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEZ2131144.1"
                     /translation="MKKSLIALTLAALPVAAMADVTLYGTIKAGVEVSRVKDAGTYKA
                     QGGKSKTATQIADFGSKIGFKGQEDLGNGMKAIWQLEQKASIAGTNSGWGNRQSFIGL
                     KGGFGTVRAGNLNTVLKDSGDNVNAWESGSNTEDVLGLGTIGRVESREISVRYDSPVF
                     AGFSGSVQYVPRDNANDVDKYKHTKSSRESYHAGLKYENAGFFGQYAGSFAKYADLNT
                     DAERVAVNTANAHPVKDYQVHRVVAGYDANDLYVSVAGQYEAAKNNEVGSTKGKKHEQ
                     TQVAATAAYRFGNVTPRVSYAHGFKAKVNGVKDANYQYDQVIVGADYDFSKRTSALVS
                     AGWLKQGKGAGKVEQTASMVGLRHKF"
BASE COUNT          464 a          431 c          498 g          558 t
ORIGIN      
        1 ttagcttgtg ggtatttacc ggaaaaaaca gaaaccgctc cgccgtcatt cccgcgcagg
       61 cgggaatcta ggtctgtcgg cacggaaact tatcaggtaa aacggtttct tgagattttg
      121 cgtcctggat tcccactttc gtgggaatga cgggatgcag gttcgtggga atgacggaat
      181 gtaggttcat gggaatgacg cggtgcaggt ttccgtacgg atgaatttgt cattcccgcg
      241 caggcgggaa tctaggtctg tcggtgcgga aacttatcgg gtaaaacggt ttcttgagat
      301 tttgcgttct agattcccac tttcgtggga atgacggaat gtaggttcgt gggaatgacg
      361 gcggagaagt ttctgctttc ccgataaatg cccactctcg tgggaatgaa ggctgccgca
      421 ttaaatagca aacgaatcat ttcaaataaa aaagcctgtc tgacgacagg ctttttgttg
      481 ataccaatct tttcagatta gaatttgtga cgcagaccaa ccatgctggc agtttgttcg
      541 acttttcccg cgcctttacc ttgtttcaac caaccggcag aaaccagagc ggaagtgcgt
      601 ttggagaagt cgtagtcggc accaacgata acttggtcgt attggtaatt tgcgtctttc
      661 acgccattca ctttagcttt gaagccgtgg gcgtaagaaa cgcgaggcgt tacgttgcca
      721 aaacggtaag cggcagtagc ggcaacttga gtttgctcgt gttttttacc cttggtagaa
      781 ccaacctcgt tgtttttagc agcttcatac tgaccggcaa cagaaacgta caggtcattg
      841 gcatcgtaac cggcaactac gcggtgtact tggtaatcct taacaggatg ggcatttgca
      901 gtatttactg caacacgttc tgcatcagtg ttcaaatcag catatttggc aaaagaacct
      961 gcgtattgac cgaagaaacc ggcattttcg tatttcagac cggcgtggta agactcacgg
     1021 ctggacttcg tatgtttgta tttatccaca tcattcgcat tatcgcgcgg aacgtattgt
     1081 acgctgccgc tgaagcctgc aaatacggga gagtcgtagc gtacggagat ttcacggctt
     1141 tctacacgac cgatagtacc cagtcccagt acatcttcgg tgttagaacc agattcccat
     1201 gcattgacgt tgtcgccgct gtctttcaat acggtgttca gattaccggc gcggacggta
     1261 ccgaagccgc ctttcaagcc gatgaaggac tggcggttac cccagccgct gttagtgccg
     1321 gcgatggagg ctttttgttc caactgccaa atggctttca tgccgttgcc gaggtcttct
     1381 tgacctttga aaccgatttt agaaccgaag tcggcaattt gggttgcagt tttagatttt
     1441 ccgccttgag ctttatatgt accagcatct tttacgcgag aaacttctac gcctgcttta
     1501 attgtaccgt acaaggtaac gtcagccatt gctgcaacag gcagggcagc cagtgtcagg
     1561 gcaatcaggg attttttcat tgctgtattc cttttcatag ttaagaaatt taagccagcc
     1621 gggctttcca agccgcttag ctttgcattt accgccgacg ttttcggcga ttccatgtct
     1681 gaaactatag atgttcctgt ctgaaaaaac aaacttctgc ctgtttttgt gtggaattcg
     1741 atgtgtattt tgaagggcgg atagagatat tgtgggtatt ttttgtttta taacatatgg
     1801 ttatttaaat tttttaagat ttgcattttt acaacactta ctcgggaggg tattggaggg
     1861 cattgcaaac cgggggttat aaagacggca aaaaacgcgc acgtggtttc tttcggaacg
     1921 ggcggatgca aaacccgacc ctgcggcagg a
//
LOCUS       DAWGKF010000218         1851 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.218, whole genome shotgun sequence.
ACCESSION   DAWGKF010000218 DAWGKF010000000
VERSION     DAWGKF010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1851)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1851)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.218"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..107)
                     /locus_tag="WHR07_001987"
     CDS             complement(<1..107)
                     /locus_tag="WHR07_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEZ2131145.1"
                     /translation="MSTFFRQTAQAMIAKHIDCFPLLKLDQVIDWQPIE"
     gene            148..576
                     /locus_tag="WHR07_001988"
     CDS             148..576
                     /locus_tag="WHR07_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ2131146.1"
                     /translation="MGNFAKVSGYTYNKSRYRNAAEVNAERLAKNSSADPYNFSNFTP
                     VHIFRFGTSFHIPNTGLTVGGGVSAQSGTSSLYNIRQGGYGLIDGFVRYELGKHAKLS
                     LIGTNLNGRTYFENNYNRTRGANNFYGEPRTVSMKLDWQF"
     gene            720..1778
                     /gene="dinB"
                     /locus_tag="WHR07_001989"
     CDS             720..1778
                     /gene="dinB"
                     /locus_tag="WHR07_001989"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEZ2131147.1"
                     /translation="MSSRKIIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICA
                     ASYEARQFGLHSAMSVATAKRLCPQAVYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLS
                     LDEAYLDVTRNFKNIPYASEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPN
                     GQFVLPPHKVMAFLETLPLGKIPGVGKVTLKKMQSLGMRTAGDLRRFERGELLNHFGR
                     YGYRLYDLVRGTDERPVKAERERLQISTEITLPEDLPLEQAAGHLPHLAEDLWRQITR
                     KNVEAQSVTLKLKTYDFRIITRTLTYSSVLPDCAALLQAAQMLIARVPPQTEDAFRLI
                     GIGVGHLVPKNQQQDLWA"
BASE COUNT          439 a          496 c          508 g          408 t
ORIGIN      
        1 tgttcgattg gttgccaatc aatcacctgg tccaacttca atagtgggaa gcagtcgatg
       61 tgcttggcaa tcatggcttg ggcggtttgc cggaagaagg tgctcatgag aaatccccta
      121 aatgtcttgg tgggaattta ggggattttg gggaattttg caaaggtctc agggtatacc
      181 tacaataaga gcaggtatag gaatgcagcc gaagtcaacg ccgaacgcct tgccaaaaat
      241 tccagtgcag acccgtacaa cttcagcaat ttcacacccg tgcacatatt ccgtttcgga
      301 acgagcttcc atataccgaa tacggggctg accgtcggcg gcggcgtgtc cgcacaaagc
      361 ggcacaagca gcctgtacaa catccgtcag ggcggctacg ggctgataga cggtttcgtc
      421 cgttacgaat tgggcaaaca cgccaaattg agcctcatcg gtacgaactt aaacggacgc
      481 acttattttg agaacaacta caaccgtacg cgcggcgcaa acaacttcta tggagagccg
      541 cgcactgtca gcatgaaact ggattggcag ttttaattga aaaccgtagt tttgcggatg
      601 ccgtctgaaa cagggtatgt ttcagacggc atttttatgg aggcaggcct atcggggcgt
      661 atatttggaa tttgcccgat gccggcagta gaatatccct tttatcctca gaagagccga
      721 tgtcttcacg caaaattatc cacatcgaca tggacgcatt ctacgcatcg gtagagctgc
      781 gcgaacagcc gcatttgaaa gggcggccgg tggtcgtcgc gtgggagggc gcgcgttcgg
      841 tgatttgcgc cgcatcgtat gaggcacggc agttcgggct gcattccgcg atgtcggtgg
      901 caacggcgaa aaggctgtgt ccgcaagcgg tgtatgtgcc gccgcatttc gatttgtacc
      961 gtcaggtttc cgcgcagatt cacgccgtat tcaggcgtta taccgattta atcgaaccct
     1021 tgtcgctgga cgaagcctat cttgacgtta cccgtaattt caaaaacatc ccttacgcca
     1081 gcgaagttgc caaagaaatc cgtgccgcca tttttgcgga aacaggtttg actgcatccg
     1141 caggcatcgc gccgaacaaa tttctggcga aaatcgcgtc ggactggcgc aagccgaacg
     1201 ggcagtttgt gttgccgccg cacaaagtca tggcattttt ggaaaccctg cctttgggca
     1261 aaatccccgg cgtgggcaag gtaacgctga aaaaaatgca gtcgctgggt atgcggacgg
     1321 cgggcgactt gcgccgtttc gagcgcggcg aactcttaaa ccatttcgga cgctacggat
     1381 accgcctcta tgatttggtg cgcggtacgg atgaacgccc cgtcaaagcc gaacgcgaac
     1441 gcctccaaat ctccacagaa atcaccctgc ctgaagacct gccgctcgag caggctgccg
     1501 gacacctgcc ccatcttgct gaagacctgt ggcggcaaat cacgcgcaaa aacgtcgaag
     1561 cccaaagcgt aacgctcaag ctgaagacct acgatttccg catcatcacg cgcacactga
     1621 cttattcctc cgtattgccc gactgcgcag ctctgctgca ggctgcgcaa atgttgatag
     1681 cgcgcgtccc gccgcagacg gaagacgcgt tccgccttat cggtatcggc gtggggcatc
     1741 ttgtgccgaa aaaccagcag caggatttgt gggcgtaaac cgctttacgc gcgccgtcca
     1801 aaaaacatgc cgtctgaacg gttttcagac ggcatggctg ctttatagtg g
//
LOCUS       DAWGKF010000219         1827 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.219, whole genome shotgun sequence.
ACCESSION   DAWGKF010000219 DAWGKF010000000
VERSION     DAWGKF010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1827)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1827)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.219"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            50..1219
                     /gene="metZ"
                     /locus_tag="WHR07_001990"
     CDS             50..1219
                     /gene="metZ"
                     /locus_tag="WHR07_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-succinylhomoserine sulfhydrylase"
                     /protein_id="HEZ2131148.1"
                     /translation="MSKKLHPQTLAIRGGKEQTEYREHNQALFLTSSFMWDNAQHAAD
                     LFSKKIKGFTYTRTANPTTAAFEKRIAALEGAERAVATSTGMSAIQAAFFTFLQAGDH
                     VVSSRSLFGTTVGFINNIVTKFGIEVSHVSPTDINEWKAAVKANTKLLFLETLSNPLG
                     EVANLEALAELAHGIGAILVVDNSLLSPIGSQPLKHGADISVSSATKAIDGHGRVMGG
                     VLAGSEELMAQAAVYCNSCGLAMSPFNAWQLLSGVETLSLRMEKQFDNALKIAQWLQA
                     QPQVQAVYYTGLPDHPQAALIRKQQNGGGIVIGFEVADQAAAWKVVDGVELFSRTANL
                     GDVRSTITHPWTTTHGRMQPEEKLAANIRPGLVRLSVGLEYVGDLIDDLKQALAR"
     gene            1305..1511
                     /locus_tag="WHR07_001991"
     CDS             1305..1511
                     /locus_tag="WHR07_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2788 domain-containing protein"
                     /protein_id="HEZ2131149.1"
                     /translation="MDEAVFADWALKICLTGLIIFLGFIVWNLGKESKAGKFGIAILF
                     LVLGLGVFGFVFKELLIKFLVLPK"
BASE COUNT          437 a          487 c          474 g          429 t
ORIGIN      
        1 caacgggcgc acgctccgtt gccgaacgga taaaaccgag gaattaccga tgagcaaaaa
       61 actccatccg caaacgctcg ccatacgcgg cggcaaagaa caaaccgaat accgcgaaca
      121 caatcaggcc ttgttcctga ccagcagctt catgtgggac aacgcccaac acgccgccga
      181 tttgttttca aaaaaaatca aaggcttcac ttatacccgt accgccaacc cgaccacagc
      241 cgcctttgaa aaacgcatcg ccgctttgga aggtgcggaa cgcgcggttg ccacttcgac
      301 cggcatgtcc gcgattcagg cggcgttttt cacctttttg caggcgggcg accatgtggt
      361 ttccagccgc agcctgttcg gcacgaccgt cggctttatc aataacatcg ttaccaaatt
      421 cggcatcgaa gtgagccacg tgtcgccgac tgatataaac gaatggaaag ccgccgtcaa
      481 agccaatacc aaactgctgt ttttggaaac gctgtccaac cccttgggcg aagtggccaa
      541 cttggaggca ttggcggaat tggcgcacgg catcggcgcg attttggtgg tggacaacag
      601 cctgctgtcg cccatcggct ctcagccttt gaagcacggc gcagatattt ccgtttcttc
      661 cgcaaccaaa gccatagacg gacacggacg cgtgatgggc ggcgtgttgg cgggttcgga
      721 agaactgatg gcgcaggccg ccgtttactg caactcttgc gggctggcga tgtcgccgtt
      781 taacgcgtgg cagttgttga gcggcgtgga aaccctgtcg ctgcgtatgg aaaaacagtt
      841 cgacaacgcc ctgaaaatcg cacaatggct gcaagcgcag ccgcaggttc aagccgtgta
      901 ctacaccgga ttgcccgacc atccgcaggc ggcgcttatc cgcaaacagc aaaacggcgg
      961 cggcatcgtc atcggctttg aagtcgccga ccaagcagcc gcgtggaaag tcgtggacgg
     1021 cgtggaactc ttttcccgta ccgccaacct cggcgacgtg cgctcgacca tcacccatcc
     1081 gtggacaacc acgcacggca ggatgcagcc cgaagaaaaa ctcgccgcca acatccgccc
     1141 cggattggtg cgcctgtcgg tcggtttgga atatgttggc gatttgattg acgatttgaa
     1201 acaggcactc gcacgctgat tgcgtgtttc agacggcatt ggacagcaga tgccgtctga
     1261 aacccttatc gcgtatggca tacacatcaa caataggaaa aaatatggat gaagcggttt
     1321 ttgccgattg ggcgttgaaa atctgcctga ccggtttgat tatttttttg ggttttatcg
     1381 tttggaattt gggcaaggag tccaaagcgg gcaaattcgg catcgccatt ttgtttttgg
     1441 ttttgggctt gggcgtgttc ggttttgtat ttaaagaact gctaatcaag tttttggtat
     1501 tgcccaaata ggctgccgcc tgtcaaaatg ctgtctgaaa tcataaaaag taatctgcac
     1561 cctaaaagtt tgatttaacc gccaactgat taaggtgcgg atttttatga caaaataaaa
     1621 atcatctttc cgcagtcatt cccacggacg cgaaagtctg tctttttgaa tcccggataa
     1681 ttttacatcg tcattcccgc gcaggcggga atctagtctg ttcggtttcg gtcatttacg
     1741 ataaattcct attgcttttc atttcctgat tcccacttcc gtgggaatga cggcggagcg
     1801 gataaattct cgcaatctaa aacctcg
//
LOCUS       DAWGKF010000220         1793 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.220, whole genome shotgun sequence.
ACCESSION   DAWGKF010000220 DAWGKF010000000
VERSION     DAWGKF010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1793)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1793)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1793
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.220"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            52..1560
                     /gene="nadB"
                     /locus_tag="WHR07_001992"
     CDS             52..1560
                     /gene="nadB"
                     /locus_tag="WHR07_001992"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HEZ2131150.1"
                     /translation="MQTDCDVLIAGNGLAALTLALSLPESFRIVILCKNRLDDTASHH
                     AQGGIAAAWSREDDIEKHVADTLEAGAGLCNEAAVRTILSQGKPAIEWLLAQGVAFDR
                     NYDGLHLTREGGHTCRRIAHVADYTGEAVMQSLIAQIRRRPNIRVCERQMALDIQTES
                     GAACGLTVLDCRTQETHRIRARHTVLAGGGLGQIYAATTTPPECTGDAIAMAIRAGCA
                     VENLEFIQFHPTGLARPSENGRTFLISEAVRGEGGILTNQAGERFMPHYDRRAELAPR
                     DIVARAIAAETAKQTQDFVSLDISHQPAAFVRQHFPSIHRHCLSQCGLDITRQAIPVR
                     PVQHYTCGGIQTDPSGRTSLPQLYALGETACTGLHGANRLASNSLLECVVTARLAAQT
                     IADGQAFQTVPSKRSSENTSAEADIFSDGIQNTFSRPALQAFNQRHLGILRNDTGLRR
                     AIAQLRLWKQNQTEPHTVSEYENRNLLECSLAVAQAAYRRRQNIGAHFNSDC"
BASE COUNT          432 a          603 c          445 g          313 t
ORIGIN      
        1 aatttaatcc actataccgt ttcagacgac ctctcaaaca aggacaacac catgcaaacc
       61 gattgcgacg tattgattgc cggaaacggg ctggcggcac tgacgctcgc cctgtcgctg
      121 cctgaatcgt tccgcatcgt cattttgtgc aaaaaccggc tggacgacac cgccagccat
      181 catgcgcaag gcgggattgc ggcggcgtgg tcgagagagg acgacatcga aaaacacgtt
      241 gccgatactt tggaagcggg cgcaggtttg tgcaacgaag ccgccgtccg caccatcctg
      301 tcgcagggca aaccggcaat cgaatggctg ctggcgcagg gcgtggcgtt cgaccgaaat
      361 tatgacggtc tgcacctgac acgcgaaggc gggcacacct gccgccgaat cgcccacgtc
      421 gccgactaca cgggcgaagc cgtcatgcag agcctgattg cccaaatacg ccgccgcccg
      481 aacatccgcg tttgcgagcg gcagatggcg ttggacattc aaaccgaatc aggcgcggcg
      541 tgcggactga ccgtcctcga ctgccgaacg caagaaaccc accgcatccg cgcccgccat
      601 accgtactcg caggcggcgg cttggggcag atttacgccg ccaccaccac gccgcccgaa
      661 tgcacgggcg acgccatcgc tatggcgata cgcgcaggct gcgcagtcga aaacctcgaa
      721 tttatccaat tccaccctac aggcttggca aggccgtctg aaaacggccg caccttcctg
      781 atttccgaag ccgtgcgcgg cgaaggcggc atcctgacca accaagcggg cgaacggttt
      841 atgccgcatt acgaccgccg cgccgaactc gcaccgcgcg acatcgttgc ccgcgccatt
      901 gccgccgaaa ccgccaaaca aacgcaagac ttcgtctcgc tcgacatcag ccatcaaccc
      961 gcagcgttcg tccgccagca ttttccgtcc atccatcgac actgtttatc ccaatgcggc
     1021 ttggacatca cgcgccaagc catccccgtc cgccccgtgc aacactacac ctgcggcggc
     1081 atccaaaccg accccagcgg cagaacttcc ctgccgcagc tctacgcctt aggcgaaacc
     1141 gcctgcacag ggttgcacgg agccaaccgc ctcgccagca actccctact cgaatgcgtc
     1201 gttaccgcca ggcttgccgc ccaaaccatc gcggatggac aagcgttcca aaccgtaccg
     1261 tccaaaaggt cgtctgaaaa cacctccgcc gaagcagaca tcttttcaga cggcatccaa
     1321 aacacattca gccgccccgc cctgcaagcg ttcaaccaac gccatctcgg catcctccgc
     1381 aacgataccg gcctgcgccg cgccatcgcc caactgcggc tttggaagca aaaccaaacc
     1441 gaaccgcaca ccgtgtccga atacgaaaac cgcaacctgc tcgaatgcag cctcgccgtc
     1501 gcccaagccg catacaggcg gagacagaac atcggcgcgc attttaatag tgattgttaa
     1561 ggttggctgg ttagaaaaaa tcgttcaaat gaattttaat agcatggtta agagattggc
     1621 attcagtttt tagggttgcg taagttgggt tatcaatctg ttctaaaagc agaaaggccg
     1681 agacctttgc aaaattcccc aaaatcccct aaattcccac caagccattt aggggatttt
     1741 ccatgagcac cttcttccgg caaaccgcac aagccatgat tgccaaacac atc
//
LOCUS       DAWGKF010000221         1747 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.221, whole genome shotgun sequence.
ACCESSION   DAWGKF010000221 DAWGKF010000000
VERSION     DAWGKF010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1747)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1747)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1747
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.221"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            35..922
                     /gene="prmA"
                     /locus_tag="WHR07_001993"
     CDS             35..922
                     /gene="prmA"
                     /locus_tag="WHR07_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEZ2131151.1"
                     /translation="MPYQQITINVNDAVAERLADALMEHGALSAAIEDAYAGTQNEQA
                     IFGEPGMPAEQIWQQSKVIALFGEHDEAAAIIQIAAQECGLKDLAYTGETIEDQDWVR
                     LTQSQFDPIRISDRLWITPSWHEAPEGTAVNLRLDPGLAFGTGSHPTTRLCLKWLDTQ
                     LKNGESVLDYGCGSGILTIAALKLGAGSAVGVDIDEQAVRAGKDNAEQNNVDAQFFLP
                     DGLPQGQFDVVVANILANPLRMLGEMLAARTKQGGRIVLSGLLDEQAEELGGIYSQWF
                     DLDPAETEEGWARLSGTKR"
     gene            940..1503
                     /gene="orn"
                     /locus_tag="WHR07_001994"
     CDS             940..1503
                     /gene="orn"
                     /locus_tag="WHR07_001994"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HEZ2131152.1"
                     /translation="MQDKNNLCWLDMEMTGLNPETDRIIEVAMIITDSDLNVLAQSEV
                     YAVHQSDELLDNMDEWNTATHGRTGLTQRVRESLHTEAEVEQKLLDFMSEWVPGRATP
                     MCGNSIHQDRRFMVKYMPKLENYFHYRNLDVSTLKELAKRWNPSVAKSVVKRGSHKAL
                     DDILESIEEMRHYREHFLISAPRAEAQ"
BASE COUNT          468 a          538 c          433 g          308 t
ORIGIN      
        1 aattcaatcc actatatttc caagaaagcc cgttatgccc taccaacaaa tcaccatcaa
       61 cgtcaacgat gccgtcgccg aacgcctcgc cgacgcgctg atggaacacg gcgcactctc
      121 cgccgccatc gaagatgcct acgccggcac gcaaaacgaa caggcgattt tcggcgaacc
      181 cggtatgccc gccgaacaaa tctggcagca gagcaaagtc atcgccctgt tcggcgaaca
      241 cgacgaagcc gccgccatca tccaaatcgc cgcacaagaa tgcgggttaa aagacttggc
      301 atacaccggc gaaaccatcg aagaccaaga ctgggtgcgt ctcacgcaat cgcaattcga
      361 ccccatccga atttccgacc gcctgtggat taccccctct tggcacgaag cccccgaagg
      421 cactgccgtc aacctacgcc tcgatcccgg cctcgccttc ggcactggca gccacccaac
      481 cacgcgcctc tgcctcaaat ggctggatac gcaactcaaa aacggcgaaa gcgtcctcga
      541 ctacggctgc ggttcgggca tcctgaccat cgctgccctc aaactcggcg caggttctgc
      601 cgtcggcgtc gatattgacg aacaagccgt ccgcgccggc aaggacaacg ccgaacaaaa
      661 caacgtcgat gcacaattct tcctgcccga cggcctgcct caagggcaat tcgacgtagt
      721 tgtcgccaac atcctcgcca accctttacg tatgctcggc gaaatgctcg ccgcccgcac
      781 caaacaaggc ggccgcatcg tgttatccgg tttgttggac gaacaagccg aagaactcgg
      841 cggcatttac agccaatggt tcgatctcga cccggcggaa accgaagaag gctgggcgcg
      901 cttgagcggg acaaaacgct gaaacggaaa ggaaacaccg tgcaggacaa aaacaacctc
      961 tgctggctcg atatggaaat gacggggctt aatcccgaaa ccgaccgcat tatcgaagtc
     1021 gcgatgatta ttaccgactc ggatttgaat gtattggcgc aatccgaagt ttacgccgtc
     1081 caccaaagcg acgagctgct cgacaatatg gacgaatgga acaccgccac acacggtagg
     1141 acggggctga cacagcgcgt gcgcgaatcg ttgcataccg aagccgaagt cgaacagaaa
     1201 ctgctggact ttatgtcgga atgggtaccc ggacgcgcca cgccgatgtg cggcaactcc
     1261 atccaccaag accggcgttt tatggtcaaa tatatgccga aactggaaaa ctacttccac
     1321 taccgcaacc tcgacgtttc cacgctcaaa gagcttgcca aacgctggaa tccgtccgtt
     1381 gccaaaagcg tcgtcaaacg cggttcgcac aaggcattgg acgacatttt ggagagcatc
     1441 gaagaaatgc gccactaccg cgaacacttt ctgatttccg ccccgagagc cgaagcgcaa
     1501 taagaaacaa aaaatgccgt ctgaagcgca aatcctgcat ttcagacggc atttttacag
     1561 cagattgaaa tcaaaaatat acacgcccgt cattcccgcg caggcgggaa tccggaaggt
     1621 cgggcctgcc gttattttca atcattacag aaactgaaag gtctggattc ccgcctgcgc
     1681 gggaatgacg ggcgtgtgca ttcttatagt ggattaacaa aaatcaggac aaggcgacga
     1741 agccgca
//
LOCUS       DAWGKF010000222         1743 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.222, whole genome shotgun sequence.
ACCESSION   DAWGKF010000222 DAWGKF010000000
VERSION     DAWGKF010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1743)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1743)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1743
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.222"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            96..179
                     /locus_tag="WHR07_001995"
                     /pseudo
     CDS             96..179
                     /locus_tag="WHR07_001995"
                     /inference="COORDINATES: protein motif:HMM:NF026862.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            176..418
                     /locus_tag="WHR07_001996"
     CDS             176..418
                     /locus_tag="WHR07_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity protein 31"
                     /protein_id="HEZ2131153.1"
                     /translation="MTNLKLDFYSEVIIKDSCPNDLLENGETIKGKKGVVLGISEEDG
                     IIYGYTILLFDIKYCIYIDKKYIIPTGKKFSRDDFY"
     gene            496..741
                     /locus_tag="WHR07_001997"
     CDS             496..741
                     /locus_tag="WHR07_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEZ2131154.1"
                     /translation="MKDSTGQMRLATKDLAEAIKRGEVRSSAFTTKQLKAIEKGESKI
                     PDYTWHHHQDTGRMQLINEDLHHDTGHIGWRAMSKGK"
     gene            744..1133
                     /locus_tag="WHR07_001998"
     CDS             744..1133
                     /locus_tag="WHR07_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131155.1"
                     /translation="MWKIIKEDSDDLGFAIKCLFSQSIDLNEFKLWIEQVIRDMPIED
                     IPFYIFDLADFDGGIADIDNIVGFVSSYSLSKSKKNALTGIAFLRGIDVYDPPISKEK
                     ALKALKKHPEIYQKFQHFFPFVELPPL"
     gene            1351..1623
                     /locus_tag="WHR07_001999"
     CDS             1351..1623
                     /locus_tag="WHR07_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131156.1"
                     /translation="MPIDNIPFYIFDLIDLKEGVGDIYNILDFVPNSDLSKDQDDALT
                     GIAFLRGIDVYDPPVSKEKALKALKKHPEIYQRFQHFFPFVELPPL"
BASE COUNT          606 a          268 c          341 g          528 t
ORIGIN      
        1 actgtgattg aggaataagc ataattagct taatgaatag aatcagcgat atagattgga
       61 ctgcaaatcc acgcttatac gctgtgccat gattaacagg aagagagcaa cttggatggg
      121 ctagtaggga tggtaagcat ttaaatatat caattgatgg aaagattaca cacaaatgac
      181 taatttaaaa ttagatttct actctgaagt tattataaaa gattcttgcc ctaatgattt
      241 gttagaaaat ggtgagacta ttaaaggaaa aaaaggagtg gtattaggta taagcgaaga
      301 agatggtata atctatggct atactatttt actttttgat ataaaatatt gtatatatat
      361 agataagaaa tatattatac cgactggaaa aaaattctct cgcgatgatt tttattagct
      421 aatttaagta atttaagcaa gttttttaga tactgaaact ggtaattatg tttatgtaag
      481 cataaggagt tcagattgaa ggattctaca gggcaaatga ggctggcaac caaggatttg
      541 gcggaagcca ttaaacgagg agaagtacgt agttctgctt ttacaacaaa gcaactaaag
      601 gcaatcgaaa aaggagaatc taaaataccg gattacactt ggcatcatca tcaagacact
      661 ggaaggatgc aattgattaa tgaagacttg catcatgata ccggccatat cggttggaga
      721 gcgatgagta aaggaaagta actatgtgga aaatcataaa agaggatagt gatgatttag
      781 gatttgcaat taaatgctta ttctctcagt ctattgattt aaatgaattc aagttatgga
      841 ttgaacaagt aatacgcgat atgcccatcg aggacatccc tttttatatt tttgacttgg
      901 cggattttga tgggggaatt gccgatattg acaatattgt aggttttgtt tcgagttaca
      961 gcctatcaaa atcgaaaaaa aatgccttga caggcattgc cttcttaagg gggatagatg
     1021 tctatgatcc gcctatttca aaagaaaaag cattaaaagc cttaaagaaa catcctgaaa
     1081 tttatcagaa gtttcagcat ttctttccgt ttgtagaact gcccccgctt taaacagtca
     1141 aaatgccgtc tgaaatgata ttcggctttc agacggcatt tttgacacaa agcaggtaac
     1201 caaaagagcg tttgacggca aaggaagata attatgtgaa aaattacgaa agagcaaggt
     1261 caagatttaa gttttgcaac atattgctta ttatcggcag caattaattt gcaagaattt
     1321 aaattatggt tggagaaggt tgtcttagat atgcctattg ataatatacc tttttatatt
     1381 tttgatttaa ttgatcttaa agaaggagta ggagatattt ataatatttt ggattttgtt
     1441 ccgaattcag acttatctaa agaccaagat gacgcattaa caggcattgc cttcttaagg
     1501 gggatagatg tctatgaccc tcccgtttca aaagaaaaag cattaaaagc cttaaagaaa
     1561 catcctgaaa tttatcagag gtttcagcat ttctttccgt ttgtagaact gcccccgctt
     1621 taaacagtca aaataccgtc tgaaagccat ttccgccgct cagacggcat tttcgcccct
     1681 tttgtttaca aacccttaaa atccatttac actcaaactc gttcaaaaca aaacaaaccc
     1741 tgc
//
LOCUS       DAWGKF010000223         1732 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.223, whole genome shotgun sequence.
ACCESSION   DAWGKF010000223 DAWGKF010000000
VERSION     DAWGKF010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1732)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1732)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1732
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.223"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            356..1660
                     /locus_tag="WHR07_002000"
     CDS             356..1660
                     /locus_tag="WHR07_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HEZ2131157.1"
                     /translation="MKKHIWAASLLPASLSAEPLNWWKPYSAVNSGDTAWVMTAAALV
                     LLMTLPGLALFYGGMVRKKNLLSTMMHSFSIATLVGILWVAVGYSLAFTPGNAFIGGL
                     GRVFLSGMQIDATAQMLTVSPNAPTVPEPVFMFFQMTFAIISTAIITGAFAERMKYSA
                     MMLFSGIWFLLVYVPGAHWVWGGGFMSKGGVLDYAGGTVVHINAGIAGLVAALVLGRR
                     IGYGREAMPPHNMAMTLIGAAMLWFGWFGFNAGSALAADAAAGMAMAVTQVSAVFGAA
                     GWLACEKIAGHKPSALGLASGAVSGLVGITPAAGFTGPSGAAAIGILTAAACFVSVTV
                     VKHKLRYDDSLDAFGIHGFGGLVGGILTGIFFDNRIFGGDAAVWQQLWIQVKDGFVMA
                     AYSGLMSWAILKVVGKICGGLRVGKDVEREGLDLNIHGERVE"
BASE COUNT          355 a          431 c          510 g          436 t
ORIGIN      
        1 aattaaaaat ttttaatata ttaatcaata aattaatttt ataaaataaa aatattgtca
       61 acaatatttt gccttatcgc ccaaacctct gtatattttc ctacagtaaa ttgttgacaa
      121 tccatacgcc cacatatgcg ccgcctaagg ataaatcctc ccgccggaca acgggtgcaa
      181 gggattggat gcgatatttc catattcaaa caagggattt gtttcacgca cagggcggca
      241 catcggcaaa atccccgcgc cgccccggtc cagcagggct tgcgtccctc ccggacaagc
      301 cccgaccccg cctttccgaa agacgggctc aaccattaag gaaactttaa tcaaaatgaa
      361 aaaacacata tgggcggcat ctttgctgcc ggcatcccta tcggcagaac ctttaaactg
      421 gtggaagcct tattccgccg tcaattcggg cgataccgcc tgggtgatga ctgcggctgc
      481 cttggtactg ttgatgacgc ttcccgggct ggctttattc tacggcggta tggtgcggaa
      541 aaaaaacctg ctctcgacga tgatgcacag cttttccatc gcgacattgg tgggcattct
      601 ttgggtcgcc gtcggctatt ctttagcgtt cacgccggga aatgccttta tcggcggttt
      661 ggggcgtgta tttttaagcg ggatgcagat agacgctacc gcacagatgc tgaccgtgtc
      721 gcccaatgcg ccgactgttc ccgaaccggt atttatgttt tttcagatga cgtttgccat
      781 tatttcgacc gccattatta ccggcgcgtt tgccgaacgg atgaaatatt cggcaatgat
      841 gctgttttcg ggcatatggt ttttattggt ttatgtgccg ggcgcgcatt gggtgtgggg
      901 cggcggcttt atgagcaagg gcggcgtatt ggattatgcc ggcggtacgg tggtgcacat
      961 caatgccggt atcgcgggac tcgtcgccgc cttggttttg ggcaggcgca taggctacgg
     1021 gcgcgaggcg atgcctccgc acaatatggc gatgacactg atcggcgcgg caatgttgtg
     1081 gttcggctgg ttcggcttta acgccggatc ggcgcttgcg gcagacgcgg cggcgggtat
     1141 ggcgatggcg gtaacgcagg tgtcggccgt attcggcgcg gcaggctggc ttgcctgcga
     1201 aaaaatagcg ggacacaaac cttccgcttt ggggctggct tccggcgcgg tttccggtct
     1261 ggtcggcatc acccctgccg ccggctttac cggcccgtcg ggcgcggccg ccatcggtat
     1321 attgactgcc gccgcgtgct ttgtgtccgt caccgtcgtc aaacacaaat tgcgttacga
     1381 tgattctttg gacgctttcg gcatacacgg attcggcggg ctggtgggcg gaatattgac
     1441 cggcatcttt ttcgacaacc gcattttcgg cggggatgcg gcagtttggc agcagttgtg
     1501 gatacaggta aaagacgggt tcgttatggc ggcatacagc gggctgatga gttgggcgat
     1561 tttgaaggtc gtggggaaaa tctgcggcgg cctgcgcgtc ggcaaggatg tcgaacgcga
     1621 aggtttggat ctgaatatcc acggcgaacg cgtggaataa gggcggttat gccgtctgaa
     1681 gcctgaaaat cgggtttcag acggcatttt tcacgtttgc cgccgatgga ta
//
LOCUS       DAWGKF010000224         1718 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.224, whole genome shotgun sequence.
ACCESSION   DAWGKF010000224 DAWGKF010000000
VERSION     DAWGKF010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1718)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1718)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.224"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(121..324)
                     /locus_tag="WHR07_002001"
     CDS             complement(121..324)
                     /locus_tag="WHR07_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partitioning protein ParB"
                     /protein_id="HEZ2131158.1"
                     /translation="MNGLKADRPSANKANLSIDDVIKQEEIKRISFDMSESLHRELKK
                     YAAENGVTIRVVLNKLVSDLLNK"
     gene            complement(367..774)
                     /locus_tag="WHR07_002002"
     CDS             complement(367..774)
                     /locus_tag="WHR07_002002"
                     /inference="COORDINATES: protein motif:HMM:NF025001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partitioning protein ParA"
                     /protein_id="HEZ2131159.1"
                     /translation="MIDGAPQTADLAISAIKASDLVLIPVQPSPYDIWATADLVNLIK
                     QRIKLIDGNLKAAFLINRTIKGTKIGGEIRAALEEYELPVLSTVIVQRIIYPTSAITG
                     STVLDKEPNGEAAKEIQSLANEIINLINIDNHI"
     gene            complement(787..1011)
                     /locus_tag="WHR07_002003"
     CDS             complement(787..1011)
                     /locus_tag="WHR07_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEZ2131160.1"
                     /translation="MKVISVLNQKGGSGKTTVATHLARALQLAGNSILLVDSDPQGSS
                     RDWAAVHEEQPVPVIGIDSPTIDRDLKSVV"
     gene            complement(1358..>1718)
                     /locus_tag="WHR07_002004"
     CDS             complement(1358..>1718)
                     /locus_tag="WHR07_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ2131161.1"
                     /translation="CKHLPPLLEGIAEGTTIYADKGYDSAENRQHLKEHQLLDGIMRK
                     ACRNRPLSEAQTKRNRYLSKPRYVVEQSFGTLHRKFRYARAAYFGLLKVSAQSHLKAM
                     CLNLLKAANRLSAPAAA"
BASE COUNT          471 a          362 c          314 g          571 t
ORIGIN      
        1 ttatatgtca agttttgcaa tgaaaagacg ttctgttttt ggaagaaggt attttgttat
       61 ttttagataa agttggatat tgctttgaca ttatggtcaa atacattctg ccgtgtgtta
      121 ttatttattc aataaatctg aaacgagttt attgagcacg acgcgaatag ttacaccatt
      181 ctcagccgcg tatttcttca attctctatg cagagattca gacatatcaa aactgattct
      241 cttgatttct tcttgcttga tcacatcatc aatagataag tttgctttgt ttgcactagg
      301 acgatctgct tttaatccgt tcataattat ttcctacaat atttaaaaat ttaaaataat
      361 atttcattaa atatgattat ctatatttat caaatttatt atctcattcg caagtgattg
      421 aatttcctta gctgcttctc catttggttc tttatccagt acagtgctac ctgtgatagc
      481 agatgttgga taaataatac gttgcacaat cacggttgat aaaacaggta actcatattc
      541 ttctaacgct gctctaattt ctccgccaat ctttgttcct ttaatagttc ggttaattaa
      601 aaaagcagcc tttaaatttc catctatgag ttttatccgc tgcttgatta aattaaccaa
      661 atcagcggtt gcccaaatat cgtatggcga cggttgaaca gggattaaaa ctaaatcaga
      721 ggctttaatc gctgatatgg ctaaatcggc tgtttgtggt gcgccatcaa taataacaaa
      781 atctttttaa acaacgcttt ttaaatcacg atcaattgtc gggctgtcaa taccaatcac
      841 aggaacaggt tgctcttcgt gaacagcagc ccagtcccta ctgcttcctt gtggatcgct
      901 atcaaccaat aagatgctat ttcctgctaa ttgcaaggcg cgtgccaagt gagttgcgac
      961 tgtggtttta ccacttccac ccttttgatt taatacggaa ataactttca tgttagctcc
     1021 tttgaatatc tacgctcatt atgcttttaa ttaaataata ttttaatcta ttatttaaat
     1081 aaataaaaga atatttacat tttgttttaa attttagcaa gaaaagctgt taaagagatt
     1141 actgtatcaa actagacttt tttgagatat gtggcagaaa atgagttgat attgcgttaa
     1201 agtttaaatt gagacctttg caaaaaagcc cttcccccaa cagccgaaac cccaacacag
     1261 gttttcggct gttttcgccc caaatacctc ctaattctac ccaaataccc ccttaatctt
     1321 ccctggatac ccgataatca ggcatccggg ctgcctttta ggcggcagcg ggcgcactta
     1381 gcctgttggc cgctttcaac aggttcaaac acatcgcttt caggtggctt tgcgcactca
     1441 ctttgagcag cccgaaatag gctgcccgcg catagcggaa tttacggtgc agcgtaccga
     1501 agctttgttc gaccacataa cggggcttcg acaaatatcg gttgcgtttg gtttgcgctt
     1561 ccgacagcgg acggttgcgg caggctttgc gcataatgcc gtccagcaac tgatgttctt
     1621 tcagatgttg ccggttttcc gcactgtcat agcctttatc ggcatagatg gtcgtacctt
     1681 cggctatccc ttccagcaaa ggcggcaggt gtttgcac
//
LOCUS       DAWGKF010000225         1657 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.225, whole genome shotgun sequence.
ACCESSION   DAWGKF010000225 DAWGKF010000000
VERSION     DAWGKF010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1657)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1657)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1657
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.225"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            294..1463
                     /locus_tag="WHR07_002005"
     CDS             294..1463
                     /locus_tag="WHR07_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEZ2131162.1"
                     /translation="MRKKLTALVLSALPLAAVADVSLYGEIKAGVEGRNIQLQLTEPL
                     QNIQQPQVTKRKSRIRTKISDFGSFIGFKGSEDLGEGLKAVWQLEQDVSVAGGGASQW
                     GNRESFIGLAGEFGTLRAGRVANQFDDASQAIDPWDSNNDVASQLGIFKRHDDMSVSV
                     RYDSPEFSGFSGSVQFVPAQNSKSAYTPAHFVQNKQNQQNQPPTLVPAVVGKPGSDVY
                     YAGLNYKNGGFAGNYAFKYAKHANVGRDAFELFLLGSGSDEAKGTDPLKNHQVHRLTG
                     GYEEGGLNLALAAQLDLSENADKTKNSTTEIAATASYRFGNAVPRISYAHGFDFIERG
                     KKGENTSYDQIIAGVDYDFSKRTSAIVSGAWLKRNTGIGNYTQINAASVGLRHKF"
BASE COUNT          420 a          394 c          422 g          421 t
ORIGIN      
        1 tgccgcgtgt gtttttttat ggcgttttaa aaagccgaga ctgcatccgg gcagcagcgc
       61 atcggctcgc acgaggtctg cgcttgaatt gtgttgtaga aacacaacgt ttttgaaaaa
      121 ataagctatt gttttatatc aaaatataat catttttaaa ataaaggttg cggcatttat
      181 cagatatttg ttctgaaaaa tggttttttg cggggggggg gtataattga agacgtatcg
      241 ggtgtttgcc cgatgttttt aggtttttat caaatttaca aaaggaagcc gatatgcgaa
      301 aaaaacttac cgcgctcgta ttgtccgcac tgccgcttgc ggccgttgcc gatgtcagcc
      361 tgtacggcga aatcaaagcc ggcgtggaag gcaggaacat ccagctgcag ttgaccgaac
      421 cgctccaaaa tattcaacaa cctcaggtta ctaagcgcaa aagccgcatc aggacgaaaa
      481 tcagcgattt cggctcgttt atcggcttta aggggagcga ggatttgggc gaagggctga
      541 aggctgtttg gcagcttgag caagacgtat ccgttgccgg cggcggcgcg tcccagtggg
      601 gcaacaggga atcctttatc ggcttggcag gcgaattcgg cacgctgcgc gccggtcgcg
      661 ttgcaaatca gtttgacgat gccagccaag ccattgatcc ttgggacagc aataatgatg
      721 tggcttcgca attgggtatt ttcaaacgcc acgacgatat gtcggtttcc gtacgctacg
      781 attcccccga attttccggt tttagcggca gcgtccaatt cgttccggcc caaaacagca
      841 agtccgccta tacgccggct cattttgttc agaataagca aaatcagcaa aatcagccgc
      901 ctactctcgt tccggctgtt gtcggcaagc cggggtcgga tgtgtattat gccggtctga
      961 attacaaaaa tggcggtttt gccgggaact atgcctttaa atacgcgaaa cacgccaatg
     1021 tgggccgtga tgcttttgag ttgttcttgc tcggcagcgg gagtgatgaa gccaaaggta
     1081 ccgatccctt gaaaaaccat caggtacacc gcctgacggg cggctatgag gaaggcggct
     1141 tgaatctcgc cttggcggct cagttggatt tgtctgaaaa tgccgacaaa accaaaaaca
     1201 gtacgaccga aattgccgcg actgcttcct accgcttcgg taatgcagtt ccacgcatca
     1261 gctatgccca tggtttcgac tttatcgaac gcggtaaaaa aggcgaaaat accagctacg
     1321 atcaaatcat cgccggcgtt gattatgatt tttccaaacg cacttccgcc atcgtgtctg
     1381 gcgcttggct gaaacgcaat accggcatcg gcaactacac tcaaattaat gccgcctccg
     1441 tcggtttgcg ccacaaattc taaatatcgg ggcggtgaag cggatagctt tgtttttgac
     1501 ggctcgcctt cattctttga ttgcaatctg actgccaatc tgcttcagcc ccaaacaaaa
     1561 atccggatac ggaagaaaaa cggcaataaa gacagcaaat accgtctgaa agattttcag
     1621 acggtatttc gcattttcgg cttggtttgc acatata
//
LOCUS       DAWGKF010000226         1624 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.226, whole genome shotgun sequence.
ACCESSION   DAWGKF010000226 DAWGKF010000000
VERSION     DAWGKF010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1624)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.226"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(20..682)
                     /locus_tag="WHR07_002006"
     CDS             complement(20..682)
                     /locus_tag="WHR07_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ2131163.1"
                     /translation="MIHAVLFDLDGTLADTALDLGGALNTLLARHGLPAKSMDEIRTQ
                     ASHGAAGLIKLGAGITPDHPDYARWRTEYLEEYDRRYAQDTELFDGVNELIAELNQRG
                     IKWGIITNKPMRFTDKLVPKLGFIIPPAVVVSGDTCGEPKPSIKPMLYACGQIHADPQ
                     HTLYVGDAERDIQAGRNAGMKTVLAEWGYIAPEDDTGSWQADFHIRTPLDLLECLDKI
                     QP"
     gene            complement(695..1522)
                     /locus_tag="WHR07_002007"
     CDS             complement(695..1522)
                     /locus_tag="WHR07_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEZ2131164.1"
                     /translation="MKLDIYALLERALLSGDPDEKGRLTDEAFAAVQNADGAEANAPP
                     ADFPRAGRPDKPVLVAPSQLTPRKMNTTEGYAAMLHAIAHIEFNAVNLALDAAYRFRT
                     LPFQFVRDWVKVAKEEVYHFRLMRDRLRAFGFDYGSFEAHNHLWDMAYKTAYDPLLRM
                     ALVPRVLEARGLDVTPGIRAKVAQRGDSETCGVLDIIYRDEVGHVAIGNHWYQHLCRE
                     RGLEPITLFRSLIARYDMFIFRGYVNIEAREKAGFSRFELDMLEDFEQGLKQNKNTV"
BASE COUNT          306 a          433 c          500 g          385 t
ORIGIN      
        1 tttgtggggc ggatattttt cagggctgta ttttgtccag acattcgagc agatcgagtg
       61 gcgtgcggat gtggaaatcc gcctgccatg agccggtatc gtcttcggga gcgatgtagc
      121 cccattcggc gaggacggtt ttcatgccgg cgttgcggcc tgcttggatg tcgcgttcgg
      181 catcaccgac gtagagtgtg tgttgcgggt cggcgtggat ttgtccgcac gcatacagca
      241 tgggtttgat gctgggcttg ggttcgccgc aggtgtcgcc gctgacgacg acggcgggtg
      301 ggatgatgaa gccgagtttg gggacgagtt tgtcggtgaa gcgcatgggt ttgttggtga
      361 tgatgcccca tttgatgccg cgttggttga gttcggcaat gagttcgttc acgccgtcaa
      421 agagctcggt gtcttgggcg tagcggcggt cgtattcctc cagatattcg gtgcgccatc
      481 gggcatagtc ggggtggtcg ggggtgatgc ctgcgccgag tttgatcagt cctgccgcgc
      541 cgtggctggc ttgggtgcgg atctcgtcca tgctttttgc aggtagtccg tggcgagcga
      601 gcagggtgtt gagtgcgcct ccgaggtcga gggcggtgtc ggcaagtgtg ccgtcgaggt
      661 cgaagagtac ggcgtgtatc atgtgtgttc cttttcagac ggtatttttg ttctgtttca
      721 aaccctgctc gaaatcttcc agcatatcca attcaaagcg gctgaagccc gctttttcgc
      781 gcgcttcgat gttcacatag ccgcggaaga taaacatatc gtaacgggca atcagactgc
      841 ggaacagggt aatcggttcc aaaccgcgtt cgcggcagag gtgttgatac caatggttgc
      901 cgatggcgac atgacccact tcgtcgcggt aaatgatgtc caatacgccg caggtttccg
      961 aatcgccgcg ctgcgccacc ttcgcgcgta tccccggcgt aacgtccagc ccgcgcgctt
     1021 ccaacacgcg cggtaccaac gccatacgca acagcgggtc gtaggcggtt ttgtacgcca
     1081 tatcccacaa atggttgtgc gcctcgaaac tgccgtaatc gaagccgaaa gcgcgcaatc
     1141 tgtcgcgcat caggcggaaa tggtacacct cttccttcgc cactttcacc cagtcgcgga
     1201 caaactgaaa cggcagcgtg cggaaacggt atgccgcgtc caaagctaga ttgacggcgt
     1261 tgaattcgat atgcgcaatc gcgtgcagca tcgccgcata accttcggtt gtgttcattt
     1321 tgcgcggggt cagttgcgac ggcgcgacca aaacaggctt gtccggccgt cccgctcggg
     1381 ggaagtccgc cggcggcgcg tttgcttccg ccccgtccgc attttgaacg gcggcaaacg
     1441 cctcatccgt cagccgtcct ttttcatctg ggtcgcccga aagcagggcg cgttccagca
     1501 aagcataaat atcgagtttc atctcaagtc cgccgtgttc ggaaaacaaa tattatagcg
     1561 ttttaaaaaa acaagatgag gcatataatc tccgcgattc ggcattccgc gcccaaaccg
     1621 tcaa
//
LOCUS       DAWGKF010000227         1609 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.227, whole genome shotgun sequence.
ACCESSION   DAWGKF010000227 DAWGKF010000000
VERSION     DAWGKF010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1609)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1609)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.227"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(79..771)
                     /locus_tag="WHR07_002008"
     CDS             complement(79..771)
                     /locus_tag="WHR07_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEZ2131165.1"
                     /translation="MFHAFILRIYTMIKNISKLINHAVLIGFIPNIVFAYPIFAENPA
                     SYQNIHVRSWKARRDSGIVKQDLDFSCGAASIATLLNNFYGRHYSEAEILDKMDKTQM
                     RASFDDMQRIMPELGFEAQGYALPFEQLVQLKIPVIVYLKYRKNNHFSVLNGINGETV
                     LLADPSLGHVSMSKSQFLSAWKTRDGEMEGKILAIVPKNTDFVRNQMFFNKNPVRQTR
                     FTVEQIQMRQKR"
     gene            complement(1077..>1609)
                     /locus_tag="WHR07_002009"
     CDS             complement(1077..>1609)
                     /locus_tag="WHR07_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131166.1"
                     /translation="DFILTVASQIAYADLPLSLEELLTDKGKFKLESSISYINTERNQ
                     SEFANPIYVQTSATKIATVMAMMITPVMAQNLDSQVFDSQNVKAIQLSQAEMKETQGE
                     FVPIIAAAAFGGALGAWEYHGANLYNHGKLGTAQGAATAAGIGAATGVAAKQGWLLLP
                     EADWLEIWHGDRVFMH"
BASE COUNT          502 a          319 c          280 g          508 t
ORIGIN      
        1 gtactgtctg cggcttcgtc gccttgtcct gatttttgtt aatccactat ataaaataaa
       61 tgggcaaaaa tcggtttatt atcgtttttg ccgcatttgg atttgttcta ccgtaaaacg
      121 tgtttgacga acgggattct tattaaaaaa catctgattt ctaacaaaat cagtattttt
      181 tggcacgatg gctaaaattt ttccttccat ttcgccatca cgtgttttcc atgcgctcaa
      241 gaattgtgat ttgctcattg agacgtgccc cagcgatgga tcagccagca aaacagtttc
      301 tccgttaata ccgttcaata ccgaaaaatg gttgttttta cggtatttta aatacacaat
      361 tacaggaatt tttagttgta ccaactgttc aaatggcaaa gcataacctt gtgcttcaaa
      421 acccagttcg ggcattatgc gttgcatatc atcaaaagaa gcacgcattt gggttttatc
      481 cattttgtcc aagatttccg cttcagaata atgtctgcca taaaaattat tcagtaacgt
      541 ggcaatcgaa gccgcgccgc aagaaaaatc caaatcttgt tttactatgc cggaatctcg
      601 ccgtgctttc caactccgta catggatgtt ttggtaagaa gcggggtttt cagcaaatat
      661 agggtaagca aaaacaatat ttgggataaa gccaattaaa accgcatggt ttattaattt
      721 agaaatattt tttatcatag tatatatgcg tagaataaac gcatgaaaca taaaaaaata
      781 aaatcatatg caattttatt gcatgaataa atatgaataa aatagataat gatgggagta
      841 aatacgccat gtattttgga agtttaaatt tattaataat aaaataattt atcgtagcgc
      901 aaataaatcc caaaattgga acgattagaa aaaaaattaa tacacccatc atcatgcaaa
      961 ctctatatta ataaatagct aactaattct attgtggaaa ttagttagct aactaaaagt
     1021 tattaatgat tatttccgag aattgactgc attgttggca gcattggccc caaaacctag
     1081 tgcatgaata cccggtctcc atgccaaatt tccagccaat ccgcctccgg cagcagcagc
     1141 cagccctgtt ttgccgctac tcctgttgcc gcaccgattc ctgccgcagt agccgcgcct
     1201 tgcgcagttc ctaatttacc atgattatac aaattagcac catgatactc ccatgcacct
     1261 aatgcaccgc caaaagcagc ggctgcaata atgggaacaa attcaccttg tgtttctttc
     1321 atttcagcct gtgataattg aattgctttc acattttggc tgtcaaaaac ttggctgtct
     1381 aaattttgcg ccattacagg tgtaatcatc atagccatta cagttgcaat tttcgttgcg
     1441 ctggtttgca cataaatagg attagcaaat tcgctttgat tgcgttcagt gttgatgtag
     1501 ctaatactgc tttctagttt gaatttaccc ttgtcagtca ataattcttc caaacttaaa
     1561 ggtaagtcag cataagcaat ttggctggca acagtcaaaa taaaatcta
//
LOCUS       DAWGKF010000228         1574 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.228, whole genome shotgun sequence.
ACCESSION   DAWGKF010000228 DAWGKF010000000
VERSION     DAWGKF010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1574
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.228"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            41..139
                     /locus_tag="WHR07_002010"
     CDS             41..139
                     /locus_tag="WHR07_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="eamA-like transporter family protein"
                     /protein_id="HEZ2131167.1"
                     /translation="MAVVFLDERPNTQEWIGLGLVTAGVLTLALKR"
     gene            complement(210..1529)
                     /locus_tag="WHR07_002011"
                     /pseudo
     CDS             complement(210..1529)
                     /locus_tag="WHR07_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239425.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
BASE COUNT          288 a          430 c          507 g          349 t
ORIGIN      
        1 tcttgccgga tgctgcaaac aacgccggtt tgcattcctg atggcggtgg ttttcttaga
       61 cgaacgcccg aacacgcagg aatggatagg cttggggctg gttacggcgg gcgtgttgac
      121 gctggcactg aaacggtaaa gccgcaagaa ataaatgaaa tgccgtctaa aaaactgttt
      181 tcagacggca ttttcgtttc tgtccatcct cagcactcga ccacgcgcac ggatacgggg
      241 acggcttttt tccggagcgt ggcggcgagt ccggcaagcg aggtttcttt gtaggtcgcc
      301 ttcatatccc ggccggtttg cagcatggtt cggatgactt cgtcgagcga gacttttttg
      361 tccgtgccgt cttccaaaag cgcgagcgtg ccgagtttga gggctttttc ggcggcgatg
      421 ccgttgcgct cgatgcaggg gatttgcacc agtccgccga cggggtcgca agtcagcccc
      481 aaatggtgtt ccatcgccat ttcggcggcg ttttccactt gtttgggcgt gccgccgatg
      541 acttcggcgt atgcgcccgc cgccatcgaa cacgctacgc cgacttcgcc ctgacagccg
      601 acatccgcac cggaaatgga ggcgttggtc ttgtagagga tgccgattgc gcctgcggtg
      661 agcaggaagt tttcgacgcg ttcctgtgtg gcgtgcggat tgaacttgcg gaaatagtgc
      721 aatacggcgg gaatgatgcc tgccgcgccg ttggtcggtg cggtaacgac gcgtccgccg
      781 gcggcgtttt cttcgttgac cgccatggcg tacaccatcg gccagagctg ggtgttgacg
      841 atttcggttt cgcgcaggac tttgagcttg gcggcaagct gcggggcgcg gcggcggacg
      901 ttcaatcagc cgggcagttc gccgtccgca cccaagccgc gtttgatgca gccttccata
      961 acctcggcaa cggcagcggc gcggcggcgg atttcggctt cgccgcatcc ggcaagcgcg
     1021 gcttcgtttg ccaacacgac ttcggagatg tcgagccggt tcagacggca tcgggcaagc
     1081 agttcggcgc aactggtata gggataggga acggcttttt ccgtttccgc ctgccggtca
     1141 aaatcttctt cggtaacgac aaagccgccg ccgaccgaat aataaacctg ttcattcaat
     1201 accgtgccgt ctgaagcata ggcggtaaaa cgcaggctgt tggggtgttt gggcagcact
     1261 tgattgccga gtatgttcag gtcgcggtcg gggatgaagc ggatttcttg cccgttgagc
     1321 cggaggatgt gctgcgtgcg gatgcgttcg aggcgttcgg gaatgccggc aagcgggatg
     1381 tcgtgcggca ggctgccttc caaaccgagc atcagcgcgt caaatgtacc gtgtccgtat
     1441 ccggtcagtg cgagcgagcc gtaaatgtcg atgacgatgc gaacagcctg tgcatccaaa
     1501 cctgccgcaa aggcggcggc tgccttcatc gggccgaccg tatgcgaact ggaaggcccg
     1561 ataccgattt tgaa
//
LOCUS       DAWGKF010000229         1568 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.229, whole genome shotgun sequence.
ACCESSION   DAWGKF010000229 DAWGKF010000000
VERSION     DAWGKF010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1568)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1568)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1568
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.229"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            59..1432
                     /locus_tag="WHR07_002012"
     CDS             59..1432
                     /locus_tag="WHR07_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEZ2131168.1"
                     /translation="MSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLL
                     AAAQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQGY
                     IKNLPLRHTVLFGGVNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLD
                     EADRMLDMGFIDDIRKIMQMLPKQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQN
                     TTNANVEQHIIAVDTIQKRNLLERLIVDLHMNQVIVFCKTKQSVDRVTRELVRRNLSA
                     QAIHGDRSQQSRLETLNAFKDGSLRVLVATDIAARGLDIAELPFVINYEMPTQPEDYV
                     HRIGRTGRAGADGVAISLMDESEQKMFEAIKELTGNKLLIERIEGFEPRWWEQEGSKP
                     EKTETSEPRQRNRYESARAQREKNTRPETTANDAGAACGKIAGRSRRSRREHQPCALL
                     QPRYGVK"
BASE COUNT          412 a          511 c          371 g          274 t
ORIGIN      
        1 cccatcctat cggtttcccg cttcagacag cataatgtct gaaagaaaga ctacaatcat
       61 gagtaatcca ttttcctctt taggtttggg tacggaactc gtttccgcac tgaccgcgca
      121 aggttacgaa aacccgacgc ccatccaagc cgccgccatt cccaaagcac tcgccggtca
      181 tgatttacta gccgccgccc aaaccggcac aggcaaaacc gccgccttta tgctgccctc
      241 gctcgaacgc ctcaaacgtt acgccaccgc cagcacctcg cccgcgatgc accccgtgcg
      301 tatgctcgtg ttgaccccga cgcgcgaact cgccgaccaa atcgaccaaa acgtgcaggg
      361 ctacattaaa aacctgccgc tgcggcatac cgtcctcttc ggcggtgtca acatggacaa
      421 acaaaccgcc gacctgcgcg ccggctgcga aattgtcgtc gccaccgtcg gacggctgct
      481 cgaccatgtg aaacagaaaa acatcagttt aaacaaagtc gaaatcgtcg ttctggacga
      541 agcagaccgc atgttggata tggggttcat cgacgacatc cgcaaaatca tgcagatgct
      601 gcctaaacaa cgccaaaccc tgctcttttc cgccactttc tccgcaccga tacgcaaact
      661 ggcgcaagac ttcatgaatg cgcccgaaac cgtcgaggtt gccgcccaaa acaccaccaa
      721 cgcaaatgtc gagcagcaca tcatcgcggt cgataccatt cagaagcgca acctgctcga
      781 acgcctgatt gtcgatctgc atatgaacca ggttatcgtc ttttgcaaaa ccaaacaaag
      841 cgttgaccgc gtaacgcgcg aactggtgcg ccgcaacctg tccgcacagg cgatacacgg
      901 cgaccgttct caacaaagtc ggctcgaaac actcaacgcc ttcaaagacg gcagcctgcg
      961 cgtcctcgtc gccaccgaca tcgccgcacg cggtctggat attgccgaac tgcccttcgt
     1021 catcaattac gaaatgccca cccagcccga agactacgtc caccgcatcg ggcgcacggg
     1081 gcgcgccggt gcggacggcg tggcgatttc cctgatggac gaatccgaac agaaaatgtt
     1141 cgaggccatc aaagaattga ccggcaacaa gctgctcatc gaacgcatcg aaggcttcga
     1201 gccccgatgg tgggaacagg aaggctcaaa accggaaaaa accgaaacaa gcgaaccgag
     1261 acaacgcaac cgctacgaat ctgccagggc tcagcgcgaa aaaaataccc gaccggaaac
     1321 cacggcaaac gatgcgggtg ccgcatgcgg aaaaatcgcc ggtcgcagcc gccgcagccg
     1381 tcgggaacac cagccgtgcg ccctgctcca accgcgttac ggcgtaaaat agccctgaaa
     1441 atcaaatgcc gtctgaacat ttccgtttca gacggcattt ttcaaaccgg actgacgcat
     1501 tgggcgcaac cgcccatacc ggataaattt cttccacaaa cagtttcaga cggcatttgc
     1561 tgcctgta
//
LOCUS       DAWGKF010000230         1544 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.230, whole genome shotgun sequence.
ACCESSION   DAWGKF010000230 DAWGKF010000000
VERSION     DAWGKF010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1544)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1544)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1544
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.230"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            210..581
                     /locus_tag="WHR07_002013"
     CDS             210..581
                     /locus_tag="WHR07_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131169.1"
                     /translation="MNITLGRNHQINCDEKDLYKFIGYLANHPNDVNLVFEKNSVQGA
                     WGDEGRIQFFSSKAQNIFVPLGFKFTAGVGNIAYRLNCNELFEMLSQLDFVSGGKQNL
                     STIKANIPSQFHAEFDAGANM"
     gene            complement(645..1535)
                     /locus_tag="WHR07_002014"
     CDS             complement(645..1535)
                     /locus_tag="WHR07_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HEZ2131170.1"
                     /translation="MLSYCGVLSEEKFSRYYRYGVQNNKILQYIANRERNALNFIQAF
                     SEKLLKDSGIYPKFADFFAQPNKNTFESMKTAFTDLVIQNTPKNTEVEVRRIFTKIIN
                     PLAYKHNTFGTRKGSISNTPITLDELYYNRLNWRDKGKEKSLTRKEAQTLFADSANAA
                     NLNYLVNKATKFVKTLHKTSEVQRFDPTEANQAHHIFMASEFPDLASLPENLICLTPN
                     QHFNLAHPSNKTTVIDKHYQRICLMAKLDSIEQDNRANTGNYDYHEFIHVLNTGFNTD
                     QFDVSMSYETLKHRILMFDF"
BASE COUNT          475 a          231 c          302 g          536 t
ORIGIN      
        1 gggtttcggc tgtcagcgaa aaggtgaaga gaggtacttt gcaaaggtct caacctgaat
       61 atgtcaacca aatcagcgac aagctcggag aattttttgg ccggacgttg aaataggagt
      121 ttcaattctt ttaattcagc aatagatact gataaaatga aaatcttgag gaatatatca
      181 ttaaaattaa tttgttaagg agataattaa tgaatattac attaggtcga aatcatcaaa
      241 tcaattgtga tgaaaaggac ctttacaagt ttatcggcta tttggcaaat catcctaatg
      301 atgtaaattt agtctttgag aaaaatagtg tgcaaggtgc ttggggtgat gagggacgta
      361 tacagttttt ctcaagtaaa gcacaaaata tttttgtgcc actaggattt aaatttacgg
      421 caggcgtagg taatattgca tataggctaa attgtaatga gctttttgaa atgctatctc
      481 agttagattt tgtttctggt ggaaaacaaa atctttcaac aataaaagca aatattccgt
      541 ctcaatttca tgcagaattt gatgctggtg cgaatatgta aattctaatt taaaacacga
      601 atccgcttca tgagattcgt gttttttatt tttaaaatat ttatttaaaa atcaaacatt
      661 aaaatacgat gcttcaatgt ttcgtaactc atagaaacat caaactgatc tgtattaaat
      721 cctgtattga gtacatgaat aaattcatgg taatcgtaat ttcctgtatt agcacggtta
      781 tcttgctcaa tactgtccaa tttcgccatc aggcaaatac gctggtaatg tttgtcaata
      841 acggtggttt tattgcttgg gtgtgctaaa ttgaaatgct ggtttggtgt caggcaaatc
      901 agattttcag gcagcgatgc taaatcagga aattcgcttg ccataaaaat atgatgtgcc
      961 tgattggctt ctgtgggatc aaaacgttga acttcgctgg ttttgtgtag cgttttgaca
     1021 aattttgtgg ctttattaac taaataattc aaatttgcgg catttgcact atcggcaaat
     1081 agagtttgag cttctttgcg agtgagcgat ttttctttgc ctttatctcg ccagtttagg
     1141 cgattgtaat aaagctcgtc taatgtaatg ggggtattgg aaatactccc ttttcttgta
     1201 ccaaaagtat tatgtttata agccaatgga ttaatgattt tggtaaaaat acggcgaact
     1261 tctacttcgg tatttttggg tgtgttttgg ataacaagat cggtaaacgc cgttttcata
     1321 ctttcaaacg tatttttatt aggctgggca aaaaaatcgg caaattttgg ataaatacca
     1381 ctgtctttta ataatttttc actaaatgct tggatgaaat ttagggcatt tctttcacga
     1441 ttggcaatat attgcaggat tttattattc tgtacgccgt accgatagta tctagaaaac
     1501 ttttcttcgc ttaatacgcc acaatagctc agcattttaa tcgg
//
LOCUS       DAWGKF010000231         1528 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.231, whole genome shotgun sequence.
ACCESSION   DAWGKF010000231 DAWGKF010000000
VERSION     DAWGKF010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1528)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1528)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1528
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.231"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            180..509
                     /locus_tag="WHR07_002015"
     CDS             180..509
                     /locus_tag="WHR07_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ2131171.1"
                     /translation="MGSLIIEDLQESFGKEAVKGKEITVHYTGWLEDGTKFDSSLDRR
                     QPLTITLGVGQVIKGWDEGFGGMKEGGKRKLTIPSEMGYGAHGAGGVIPPHATLIFEV
                     ELLKVYE"
     gene            538..900
                     /locus_tag="WHR07_002016"
     CDS             538..900
                     /locus_tag="WHR07_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HEZ2131172.1"
                     /translation="MASSNVNKEIKDKKLSLWAKRQDGSVKWFCGQPVTRNDTAKDDT
                     VAADTDTAKKIDTKHLPSTCRDDSSTGCIETPRADFKHFQKISRYRVLPESRHMAEKL
                     RHSRAGGNLGLSARKLIG"
     gene            947..1234
                     /locus_tag="WHR07_002017"
     CDS             947..1234
                     /locus_tag="WHR07_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HEZ2131173.1"
                     /translation="MTGFNDAAGVASASDIKGKYVEKVEVKNGVVTAEMKSSGVNKEI
                     QGKKLSLWAKRQDGSVKWFCGQPVARNDKADTDKIDTKHLPSTCRDAASAD"
BASE COUNT          444 a          410 c          372 g          302 t
ORIGIN      
        1 aaatttaatc cactatattt ccatgaaaaa gcatggaacc tttacgaaaa aaataaaaca
       61 gtcaaacaaa cacagccgtt tcagctgcac cggagcagct gacgtttgag cggcatttga
      121 cttcgccgga cggtatgtta cccttgccgt tttaaccaac aagcaacgaa aggacaaata
      181 tgggcagcct gattattgaa gatttgcagg aaagcttcgg aaaagaagca gttaaaggca
      241 aagagattac cgtgcattac acaggttggc tggaagacgg caccaaattc gactccagcc
      301 tcgaccgccg ccagccgctg accatcacgc tcggcgtcgg acaagtcatc aaaggctggg
      361 acgaaggctt cggcggaatg aaggagggcg gcaaacgcaa gctgaccatc ccttcggaaa
      421 tgggctacgg cgcacacggc gccggcggcg tgattccccc gcacgccact ttgatatttg
      481 aagtcgagct gctgaaagtg tacgaataaa gctgcctggg caataccgtc tgacataatg
      541 gcttcaagca acgtaaacaa agaaatcaaa gacaaaaaac tctccctgtg ggccaagcgt
      601 caagacggtt cggtaaaatg gttctgcgga cagccggtta cgcgcaacga caccgccaaa
      661 gacgacaccg tcgccgccga caccgacacc gccaagaaga tcgacaccaa gcacctgccg
      721 tcaacctgcc gcgatgattc atctaccggt tgcatagaaa caccacgcgc cgacttcaaa
      781 cacttccaaa aaatcagccg ttaccgagta ttgcccgaat cacggcacat ggccgaaaaa
      841 cttcgtcatt cccgcgcagg cgggaatcta ggtctgtcgg cacggaaact tatcgggtaa
      901 aacggtttct tgagattttg cgttctagat tcccactttc gtgggaatga cgggatttaa
      961 tgatgccgcc ggcgtggcat ccgcctccga catcaaaggc aaatatgttg agaaagttga
     1021 agtcaaaaac ggcgtcgtta ccgccgaaat gaaatcaagc ggcgtaaaca aagaaatcca
     1081 aggcaaaaaa ctctccctgt gggccaagcg tcaagacggt tcggtaaaat ggttctgcgg
     1141 acagccggtt gcgcgcaacg acaaagccga caccgacaaa atcgacacca agcacctgcc
     1201 gtcaacctgc cgcgacgcag catctgccga ttaaggcaaa ttataccata aattttaaat
     1261 aaatcaagcg gtaaatgatt ttccacggcc actcggatta atccgggtga cttccttttt
     1321 aaaggtttgc aaggcaagcg gggtcgtccg ttttggtgga aataatatat cgattgcgct
     1381 tcaaggctct gcgcgtacct cattgccgcc cgtttaaaca cggggtttat ctgacaggcg
     1441 cgtaatccgc cctctcattt accgaacaag cgaactggat tcccgcctac tcgggaatga
     1501 cgaagctatc cgtacggaaa cctgcacc
//
LOCUS       DAWGKF010000232         1507 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.232, whole genome shotgun sequence.
ACCESSION   DAWGKF010000232 DAWGKF010000000
VERSION     DAWGKF010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.232"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            34..1434
                     /locus_tag="WHR07_002018"
     CDS             34..1434
                     /locus_tag="WHR07_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HEZ2131174.1"
                     /translation="MTPSALKKTVLLLGTAFAAASVHASGYHFGTQSVNAQSTANAAA
                     AEAADASTIFYNPAGLSKIDSSQISVNANIVLPSIHYEADSATDFTGLPVQGSKSGKI
                     TKTTVAPHIYGAYKVNDNLTVGLGVYVPFGSATEYEKDSVLRHNINKLGLTSIAVEPV
                     AAWKLNDRHSFGAGIIAQHTSAELRKYADWGIKSKAEILTAKPPKPNGVAEAAKIQAD
                     GHADVKGSDWGFGYQLAWMWDINDRARVGVNYRSKVSHTLKGDAEWAADGAAAKAMWS
                     TMLAANGYTANEKARVKIVTPESLSVHGMYKVSDKADLFGDVTWTRHSRFDKAELVFE
                     KEKTVVKGKSDRTTITPNWRNTYKVGFGGSYQISEPLQLRAGIAFDKSPVRNADYRMN
                     SLPDGNRIWFSAGMKYHIGKNHVVDAAYTHIHINDTSYRTAKASGNDVDSKGASSARF
                     KNHADIIGLQYTYKFK"
BASE COUNT          395 a          482 c          361 g          269 t
ORIGIN      
        1 ttatccaccg tccgcctttt tacggaaacc gaaatgaccc cttccgcact gaaaaaaacc
       61 gtcctgctgc tcggcactgc ctttgccgcc gcatccgtcc acgcatccgg ctaccacttc
      121 ggcacacagt cggtcaacgc gcaaagtacg gcaaatgccg ccgccgccga agccgccgat
      181 gcctcaacca ttttctacaa tccggccggt ttgagcaaaa tcgacagcag ccaaatttcc
      241 gtcaacgcca acatcgtgct gcccagcatt cattatgagg cggattccgc caccgacttt
      301 accgggcttc ccgtccaagg ttcgaaaagc ggcaaaatca ccaaaaccac ggtcgcgccc
      361 cacatctacg gcgcatacaa agtcaacgac aatctgaccg tgggcttggg cgtgtacgtc
      421 cccttcggct ctgccaccga atacgaaaaa gattccgtgt tgcgccacaa catcaacaaa
      481 ctcggtctga ccagcatcgc cgtcgaacct gtcgccgcat ggaaactcaa cgaccgccat
      541 tccttcggcg caggcatcat cgcccaacat acttccgccg aactgcgcaa atatgccgac
      601 tgggggatta agagtaaagc agagatattg acggcaaaac cgcccaaacc taacggtgta
      661 gccgaagctg caaaaattca ggccgacgga cacgccgatg tcaaaggcag cgattggggc
      721 ttcggctacc aactggcgtg gatgtgggac atcaacgacc gcgcgcgcgt gggcgtgaac
      781 taccgttcca aagtctcgca cacgctcaaa ggcgatgccg aatgggcggc agacggcgcg
      841 gcggcgaaag caatgtggag tacgatgctt gcagcaaacg gctacacggc gaatgaaaaa
      901 gcccgcgtta aaatcgttac gcctgagtct ttgtccgtac acggtatgta caaagtgtcc
      961 gataaagccg acctgttcgg cgacgtaact tggacgcgcc acagccgctt cgataaggcg
     1021 gaactggttt ttgaaaaaga aaaaaccgtc gtcaaaggca aatccgaccg caccaccatc
     1081 acccccaact ggcgcaacac ctacaaagtc ggcttcggcg gttcttatca aatcagcgaa
     1141 ccgctgcaac tgcgcgccgg catcgctttt gacaaatcgc ccgtccgcaa cgccgactac
     1201 cgcatgaaca gcctgcccga cggcaaccgc atctggttct ccgccggtat gaaataccat
     1261 atcggcaaaa accacgtcgt cgatgccgcc tacacccaca tccacatcaa cgacaccagc
     1321 taccgcacgg cgaaggcaag cggcaacgat gtggacagca aaggcgcgtc ttccgcacgt
     1381 ttcaaaaacc acgccgacat catcggcctg caatacacct acaaattcaa ataaacggcc
     1441 cgccgtttga ttgtagaaat gccgtctgaa acagatttcc gtttcagacg gcattgtttt
     1501 aggctcg
//
LOCUS       DAWGKF010000233         1472 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.233, whole genome shotgun sequence.
ACCESSION   DAWGKF010000233 DAWGKF010000000
VERSION     DAWGKF010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1472)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1472)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1472
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.233"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            115..915
                     /locus_tag="WHR07_002019"
     CDS             115..915
                     /locus_tag="WHR07_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HEZ2131175.1"
                     /translation="MDLSALKGRKAALYVSVMGDQGSGNISGGRYSIDALIRGGYQNN
                     PESATQYSYPAYDTTATTKSDALSSVTTSTSLLNAPAAALTRNSGRKGERSAGLSVNG
                     TGDYRNETLLANPRDVSFLTNLIQTVFYLRGIEVVPPEYADTDVFVTVDVFGTVRSRT
                     ELHLYNAETLKAQTKLEYFAVDRDSRKLLIAPKTAAYESQYQEQYALWMGPYSVGKTV
                     KASDRLMVDFSDITPYGDTTAQNRPDFKQNNGKNPDVGNEVIRRRKGG"
     gene            919..>1472
                     /gene="mafB"
                     /locus_tag="WHR07_002020"
     CDS             919..>1472
                     /gene="mafB"
                     /locus_tag="WHR07_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HEZ2131176.1"
                     /translation="MKPLRRLTNLLAACAVAAAAFGQPALAADLAQDPFITDNAQRQH
                     YEPGGKYHLFGDPRGSVSDRTGQINVIQDYTHQMGNLLIQQAAIQGNLGYTVRFSGHG
                     HEEHAPFDNHAADSASKEQGNVDEGFTVYRLNWEGHEHHPADAYDGPKGGNYPKPTGA
                     RDEYTYHVNGTARSIKLNPTDTRS"
BASE COUNT          380 a          553 c          327 g          212 t
ORIGIN      
        1 ctcgtcctaa ccgcctgcgg cacactgacc ggcatacccg cccacggcgg cggcaaacgc
       61 tttgccgtcg aacaagaact cgtcgccgca tcgtcccgcg ccgccgtcaa agaaatggat
      121 ttgtccgccc tgaaaggacg caaagccgcc ctttacgtct ccgttatggg cgaccaaggt
      181 tcgggcaaca taagcggcgg acgctactct atcgacgcac tgatacgcgg cggctaccaa
      241 aacaatcccg aaagtgccac ccaatacagc taccccgcct acgacactac cgccaccacc
      301 aaatccgacg cgctctccag cgtaaccact tccacatcgc tcttaaacgc ccccgccgcc
      361 gccctgacta gaaacagcgg acgcaaaggc gaacgctccg ccggactgtc cgtcaacggc
      421 acgggcgact accgcaacga aaccctgctc gccaaccccc gcgacgtttc tttcctgacc
      481 aacctcatcc aaaccgtctt ctacctgcgc ggcatcgaag tcgtaccgcc cgaatacgcc
      541 gacaccgacg tattcgtaac cgtcgacgta ttcggcaccg tccgcagccg caccgaactg
      601 cacctctaca acgccgaaac ccttaaagcc caaaccaagc tcgaatattt cgccgttgac
      661 cgcgacagcc ggaaactgct gattgcccct aaaaccgccg cctacgaatc ccaataccaa
      721 gaacaatacg ccctctggat gggaccttac agcgtcggca aaaccgtcaa agcctcagac
      781 cgcctgatgg tcgatttctc cgacattacc ccctacggcg acacaaccgc ccaaaaccgt
      841 cccgacttca aacaaaacaa cggtaaaaac cccgatgtcg gcaacgaagt catccgccgc
      901 cgcaaaggag gataaaccgt gaaaccgctg cgcagactga caaacctcct tgccgcctgc
      961 gccgtagcgg ccgccgcctt cggacagccc gccctcgcag cggacttggc gcaagacccg
     1021 ttcattaccg ataacgccca acggcagcac tacgaacccg gcggcaaata ccacctcttc
     1081 ggcgacccgc gcggcagcgt ctccgaccgc accggtcaaa tcaacgtcat ccaagactat
     1141 acccaccaga tgggcaacct gctcatccaa caggcggcaa tccaaggcaa tcttggttac
     1201 accgtccgct tttccggaca cggacacgaa gaacacgccc ccttcgacaa ccacgccgcc
     1261 gacagcgcaa gcaaagaaca aggcaacgtt gacgaaggct ttaccgtgta ccggctcaac
     1321 tgggaaggac acgaacatca tcccgccgat gcctacgacg gcccgaaggg cggcaattac
     1381 cccaaaccta cgggcgcacg agacgaatac acctatcacg tcaacggcac agcccgcagt
     1441 atcaaactca atccgaccga cacccgcagc at
//
LOCUS       DAWGKF010000234         1445 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.234, whole genome shotgun sequence.
ACCESSION   DAWGKF010000234 DAWGKF010000000
VERSION     DAWGKF010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1445
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.234"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            114..1241
                     /locus_tag="WHR07_002021"
     CDS             114..1241
                     /locus_tag="WHR07_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEZ2131177.1"
                     /translation="MKIVFITTVASSIYGFRAPVIKKLIGKNHQVYAFVSEFSDNELD
                     IIREMGVTPVTYRSNRSGLNPFSDIKSTFLIFKELKKISPDLVFPYFAKPVIFGTFAA
                     KLAGVPRIVGMLEGLGFAFTPQPEGIPLKTKIIKGILIALYRIALPMLESLIVLNPDD
                     KDELTDKYGIKIKNIHILGGIGLDSRQYPYSEADIPDEKEPVKFLFIGRFLKEKGIDD
                     FIRAAEQVKDKYPDTVFTALGAIDKSRGGGDLERLAARDIIRFPGFVNNVSEVIKEHH
                     IFVLPSYYREGVPRSTQEAMAVGRAVITTDVPGCRETVADKVNGFLIEPWNPRILAEK
                     MIYFIENREAVRLMGNASYAIAKDKFDAEKVDLKLLDILKA"
BASE COUNT          386 a          346 c          339 g          374 t
ORIGIN      
        1 ggtttttgtt aatccactat aatacgcagg caaacccaag ccttgctggg ttacaggatg
       61 aaaccctgcc gtagcagacc gcatttccaa tccatattca aggtgtccgc cttatgaaaa
      121 tcgtttttat cacaacagtc gcatccagca tttacggttt ccgcgccccc gtcattaaaa
      181 aattaatcgg caaaaaccat caggtgtatg cctttgtatc ggagttttcc gataatgaat
      241 tggatattat cagggaaatg ggggttacac ccgttaccta ccgttcaaac cgcagcgggc
      301 tgaacccgtt ttccgatata aaatccacct tcctcatctt taaagaactc aaaaaaatat
      361 cgccggattt ggttttccct tatttcgcaa aacccgtgat tttcggcact tttgccgcaa
      421 aactggcagg cgtgcccaga atcgtcggga tgctggaagg tttgggattc gcatttaccc
      481 cgcagccgga aggcataccg ttaaaaacaa aaatcataaa ggggatcttg attgccttat
      541 accgcattgc cctgccgatg ttggaaagcc tgattgtatt aaaccccgac gacaaagacg
      601 aactgacgga caaatacggc atcaaaataa aaaacatcca tattttgggc ggaatcggtc
      661 tggattcgcg gcaatatcct tattccgagg cggatattcc cgatgaaaaa gaacccgtaa
      721 aattcctctt tatcggcaga tttctgaaag aaaaggggat tgatgatttt attcgggcgg
      781 cggaacaggt taaggacaaa taccccgata cggtttttac cgctttgggc gcaatcgaca
      841 aatcacgcgg ggggggcgat ttggaacggc ttgccgcccg cgatattatc cgtttccccg
      901 gttttgtgaa caatgtttcc gaagtgataa aagaacatca tatattcgta ttgccgtctt
      961 attataggga aggcgttccc cgaagcactc aggaggcaat ggccgtcggc agggcagtga
     1021 ttacgacgga tgtccccgga tgcagggaaa cggtcgccga caaggtcaac ggcttcctga
     1081 tcgagccttg gaatccccgc atcttggccg aaaaaatgat ttattttatc gaaaacaggg
     1141 aagccgtccg cctgatgggg aatgcaagtt atgcgattgc caaagataaa ttcgatgccg
     1201 aaaaagtcga tttgaaattg ctcgatattt tgaaggcgta aacaaggctg cccgcttttg
     1261 agtttcggtc atttctgata aacccccgtc attcccgcca cacccccgtc attcccgcga
     1321 aagcgggaat ccaggttcgt tgagtttcgg tcatttccga taaattcttg caactttgag
     1381 tttctagatt cccactttcg tgggaatgac ggcggagggt tgctgttttc ccgacaaatt
     1441 cccgc
//
LOCUS       DAWGKF010000235         1445 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.235, whole genome shotgun sequence.
ACCESSION   DAWGKF010000235 DAWGKF010000000
VERSION     DAWGKF010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1445
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.235"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            27..1364
                     /locus_tag="WHR07_002022"
     CDS             27..1364
                     /locus_tag="WHR07_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEZ2131178.1"
                     /translation="MSNHTSWSSKIGFVLAAAGSAIGLGAIWKFPYTAGTNGGAVFFL
                     LFLIFTVLVALPVQLAEFYIGRTGGQNAVDSFRALRPSTQWLWVGRMGVSACFILLSF
                     YSVVGGWVLNYVVHSFTGAVHTGADFEALFGATISNPAGSLSYQALFMLITVWVVKGG
                     ISDGIEKANRYLMPGLFILFIALAIRSLTLPGAMEGVSFLLKPNWSYFKADTMITALG
                     QAFFALSIGVSAMITYASYLGKDQDMFRSGHTIMWMNLLVSLLAGLVIFPAVFAFGFE
                     PSQGPGLIFIVLPAVFMKMPFGTVLFAVFMLLVVFATLTSAFSMLETVIASTIRQDER
                     KRKKHTWLIGTAIFIVGIPSALSFGIWGEFKVFGKTIFDLWDYVISAVIMPVGALGVA
                     VFTAWIQDKQSVLKDAGAGSTVPRAVLLLWLNTLRYLAPIAIIIVFVNSLDIL"
BASE COUNT          259 a          347 c          391 g          448 t
ORIGIN      
        1 tatcttcaca tttcttaata aattttatga gtaaccatac ttcttggtcg tccaaaatcg
       61 gtttcgtgct tgctgcggca ggttcggcca tcggtttggg cgcgatttgg aaatttcctt
      121 atacggcagg caccaacggc ggcgcggtgt ttttcctgct gtttttgata tttaccgtct
      181 tggtcgccct gcccgtccag cttgccgagt tttatatcgg gcgcacaggc ggtcaaaacg
      241 ccgtcgattc cttcagggct ctgcgtccga gtacgcaatg gctttgggtc gggcgcatgg
      301 gcgtttccgc ctgctttatt ttgctgtcgt tttacagcgt ggtcggcgga tgggtattaa
      361 attatgtcgt ccacagtttc acgggggcgg ttcataccgg cgcggacttt gaagccttgt
      421 tcggcgcgac gatttccaat ccggcaggtt cgctgtccta tcaggcactg tttatgctga
      481 ttacggtctg ggtggtcaaa ggcggcattt cagacggcat tgaaaaggca aaccgttatc
      541 tgatgccggg gctgtttatc ctctttattg cgctggcaat ccgttcgctg acgctgccgg
      601 gtgcaatgga gggcgtgtct ttcctgctca aaccgaattg gtcgtacttt aaagccgata
      661 cgatgattac ggctttaggc caggcgtttt ttgccttgag catcggcgtt tccgctatga
      721 ttacctatgc ttcgtatttg ggaaaagatc aggatatgtt ccgctcgggg catacgatta
      781 tgtggatgaa cctcttggtt tcgctgttgg caggtttggt gatttttccg gcggtgttcg
      841 ccttcggttt tgaaccgagc caggggccgg gattgatttt tatcgtattg ccggcagtgt
      901 ttatgaagat gccgttcggt acggttttgt ttgcggtatt tatgctgctg gtcgttttcg
      961 ccacgctgac ttcggcgttt tcgatgttgg aaacggtcat tgcctcaacc atccgccaag
     1021 acgagcgcaa acgcaaaaaa cacacttggc ttatcggcac ggctattttc attgtcggca
     1081 tcccgtccgc gctgtctttc ggcatctggg gtgagtttaa ggttttcggc aaaaccattt
     1141 ttgatttgtg ggactatgtt atttccgccg tcattatgcc tgtcggcgcg ttgggcgttg
     1201 ccgtatttac cgcctggatt caggacaagc agtctgtgtt aaaagatgcc ggcgcgggca
     1261 gcaccgtacc acgggcagtg ctgctgctgt ggctgaatac cttgcgctac ctcgccccga
     1321 ttgccattat tattgttttc gtcaattctt tggacatcct ttaaaagcca tccaaacagc
     1381 aaaaatgccg tctgaaagcc tttcagacgg catttttgct tcaggttcag cctatttcgt
     1441 tcaaa
//
LOCUS       DAWGKF010000236         1427 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.236, whole genome shotgun sequence.
ACCESSION   DAWGKF010000236 DAWGKF010000000
VERSION     DAWGKF010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1427)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1427)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1427
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.236"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..372
                     /locus_tag="WHR07_002023"
     CDS             <1..372
                     /locus_tag="WHR07_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HEZ2131179.1"
                     /translation="RLRRLVLIFVNPLYIIATTVPAQQAFLDAAELMQWSIETEGLGL
                     NVISHKILGKDHAQVEFEAYFRDGQHRSAHHELSGFVNIGGQWYFIDPTVPHPAMKQP
                     CICGSGKKFKACCGKYLKPVA"
     gene            complement(590..1384)
                     /locus_tag="WHR07_002024"
     CDS             complement(590..1384)
                     /locus_tag="WHR07_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEZ2131180.1"
                     /translation="MLHRLQKVVRHIAQTEIMPRFLNTPSHRKEDGSMLSEADIAAQT
                     AFAAALPLLIDCPMLGEEMSRQEQSALWAEYSGEKGLWIVDPIDGTNNFVNGLPHFAV
                     SVAFVRNGRAELGVIYNPVSGECFYAERGQGAFLNGTRLPLRLVDKKLNEAIAGVEIK
                     YLRSGKLSSRMSTLAPFGTVRSMGSSTLDWCYLACGRYDVYVHGGQKLWDYAAGALIF
                     EEAGGRLTTLEGDGFWSGEHVFKRSVVAALEPKLFERWVGWIRENQ"
BASE COUNT          365 a          432 c          326 g          304 t
ORIGIN      
        1 cggcttcgtc gccttgtcct gatttttgtt aatccactat acatcatcgc tactaccgtt
       61 ccggcgcaac aggcattcct cgatgccgcc gaactgatgc aatggagtat agaaaccgaa
      121 gggctgggct tgaacgtcat ctcgcacaag atactcggca aagaccacgc ccaagtcgaa
      181 tttgaagcct acttccgaga cggacaacac cgatccgcgc atcacgaact gtccggcttc
      241 gtcaacatcg gcggacaatg gtattttatc gatccgaccg ttccgcatcc tgcgatgaaa
      301 caaccctgca tttgcggatc gggcaaaaaa tttaaagcct gctgcggcaa atatctgaaa
      361 cctgtcgcat aaaaatgccg tctgaacgtt cagacggcat ttttaacgcg caaaaaaaaa
      421 ccattcatac caagggtaag tatgaatggt caatacattg cgggaaaacg tcttacttgc
      481 tgcactgccg aaaagggaga aacggcagcg gtaatcagcg gaaaggattg cacccgaatt
      541 aatgttaaga aacgttaatt gtgaaaatat attaacaaac ctgttgaacc tattggtttt
      601 cccgtatcca cccgacccag cgttcaaaca gcttcggttc gagcgcggca acgaccgagc
      661 gtttgaacac gtgttcacca ctccaaaacc cgtcgccttc caaagtcgtc agcctgccgc
      721 ccgcctcctc gaaaatcaac gcacccgcag catagtccca cagcttctgc ccgccgtgga
      781 cataaacatc ataacgcccg cacgccagat aacaccagtc cagcgtgctg ctgcccatac
      841 tccgcaccgt accgaaaggt gcgagcgtac tcatgcggct ggaaagtttg cccgaacgca
      901 gatatttgat ttccacgccc gcgattgcct cattgagttt tttatccacg aggcgcaggg
      961 gcaggcgcgt cccgtttaaa aacgccccct gcccgcgttc ggcgtaaaaa cattcgccgc
     1021 tgaccgggtt gtagattacg cccaattcgg cgcgcccgtt gcggacaaac gccaccgaca
     1081 cggcaaaatg cggcagcccg ttgacaaaat tgttcgtccc gtctatcgga tcgacaatcc
     1141 acagcccctt ttctcccgaa tattccgccc acaaagccga ctgctcctgc cgcgacattt
     1201 cctcgcccaa catcgggcaa tcgatcagaa gcggcaacgc ggcggcaaaa gccgtctgcg
     1261 cggcaatgtc cgcctcgctc aacatcgaac cgtcttcctt gcggtgagac ggcgtattca
     1321 aaaaacgcgg cataatttcg gtttgcgcga tatggcgcac gactttctgc aaacggtgta
     1381 acacttccta ctgtcctcat attttgaact tgcggcacgc gaacgta
//
LOCUS       DAWGKF010000237         1376 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.237, whole genome shotgun sequence.
ACCESSION   DAWGKF010000237 DAWGKF010000000
VERSION     DAWGKF010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1376
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.237"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..>1376
                     /locus_tag="WHR07_002025"
     CDS             <1..>1376
                     /locus_tag="WHR07_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HEZ2131181.1"
                     /translation="PKGNLKTEIEKLSKQPEYAYLKQLQTAKNVDWKQVQLAYDKWDY
                     KQEGLTGAGAAIVVIIVTALTYGYGAAAAGSVTAAGSSTAAAATTTAAATTTVSTAAA
                     MQTAALASLYSQAAVAIINNKGDVGKALKDLGTSDTVKQIVTSALTAGALNQMGADIA
                     QLNSKVRTELFSSTGNQTIANLGGRLATNLSNAGISAGINTAVNGGSLKDNLGNAALG
                     ALVNSFQGEAASKIKTTFSDDYVAKQFAHALAGCVSGLVQGKCKDGAIGAAVGEIVAE
                     SILGGRNPATLSDAEKHKVISYSKIIAGSVAALNGGDVNTAANAAEVAVVNNALNFDS
                     TPTNAKKHQPQKPDKTALEKIIQSIMPAHAAGAMTNPQDKDAAIWISNIRNGITGPIV
                     ITSYGVYAAGWTAPLIGTAGKAAISTCMANPSGCTVMVTQAAEAGAGIATGAVTVGNA
                     WEAPVGALS"
BASE COUNT          394 a          331 c          374 g          277 t
ORIGIN      
        1 cccaaaggca atctgaaaac cgaaatcgaa aagctgtcca aacagcccga atacgcctac
       61 ctgaaacagc ttcagacggc caagaacgtc gattggaaac aggtgcagct ggcctacgac
      121 aaatgggact ataaacagga aggcttgacc ggagccggtg cagcgattgt ggtgattatt
      181 gtaaccgctc taacttatgg atacggagcg gctgcagcgg gtagcgtaac tgccgcagga
      241 agtagtacag ccgcagctgc aacaacgaca gcggcagcaa ctaccactgt ttctactgca
      301 gctgccatgc aaaccgcagc tttagcctcc ttgtatagcc aagcagctgt agccatcatc
      361 aataataaag gcgatgtagg caaagcatta aaagatctcg gcaccagtga tacggtcaag
      421 cagattgtta cttccgcact gacggcgggt gcattaaacc agatgggagc agatattgcc
      481 caattgaaca gcaaggtaag aaccgaactg ttcagcagta cgggcaatca aaccattgcc
      541 aaccttggag gcagattggc caccaacctc agcaatgcag gtatctcagc tggtatcaat
      601 accgccgtta acggcggcag cttgaaagac aacttaggca atgccgcatt gggagcattg
      661 gttaatagct tccaagggga agccgccagc aaaatcaaaa caaccttcag cgacgattat
      721 gttgccaaac agttcgccca cgctttggcg ggttgtgtta gcggactggt acagggaaaa
      781 tgtaaagatg gggcaattgg cgcagcagtt ggggaaatcg tagctgaatc catacttggc
      841 ggcagaaacc ctgctacact cagcgatgca gaaaagcata aagttatcag ttactcgaag
      901 attattgcgg gcagcgtggc ggcactcaac ggcggcgatg tgaatactgc ggcgaatgcg
      961 gctgaggtag ctgtggtgaa taatgctttg aattttgaca gcacccctac caatgcgaaa
     1021 aagcatcaac cgcagaagcc cgacaaaacc gcactggaaa aaatcatcca aagtattatg
     1081 cctgcacatg cggcaggtgc gatgactaat ccgcaggata aggatgctgc catttggata
     1141 agcaatatcc gtaatggcat cacaggcccg attgtgatta ccagctatgg agtttatgca
     1201 gcaggttgga cagctccgct gatcggtaca gctggtaaag cagctatcag cacctgtatg
     1261 gctaatcctt ctggttgtac tgtcatggtt acgcaggctg ctgaagcggg cgcgggaatc
     1321 gccacgggtg cggtaacggt aggcaacgct tgggaagctc cagtaggagc gttgtc
//
LOCUS       DAWGKF010000238         1331 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.238, whole genome shotgun sequence.
ACCESSION   DAWGKF010000238 DAWGKF010000000
VERSION     DAWGKF010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1331)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1331)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1331
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.238"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..>1331
                     /locus_tag="WHR07_002026"
     CDS             <1..>1331
                     /locus_tag="WHR07_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEZ2131182.1"
                     /translation="WVSADDGLLVRDLNGNGIIDNGAELFGDNTKLADGSFAKHGYAA
                     LAELDSNGDNIINAADAAFQSLRVWQDLNQDGISQANELRTLEELGIQSLDLAYKDVN
                     KNLGNGNTLAQQGSYTKTNGTTAKMGDLLLAADNLHSRFKDKVELTAEQAKAANLAGI
                     GRLRDLREAAALSGDLANMLKAYSAAETKEAQLALLDNLIHKWAETDSNWGKKSPMRL
                     STDWTQTANGGVALTPSQVTRLKQNALVSLSDKAKAAIDAARDRIAVLDAYTGQDSST
                     LYYMSEEDALNIVKVTNDTYDHLAKNIYQNLLFQTRLQPYLNQISFKMENDTFTLDFS
                     GLVQAFNHVKETNPQKAFVDLAEMLAYGELRSWYEGRRLMADYVEEAKKAGKFEDYQK
                     VLGQETVALLAKTSGTQADDILQNVGFGHNKNVSLYGNDGNDTLIGGAGND"
BASE COUNT          393 a          319 c          310 g          309 t
ORIGIN      
        1 tgggtttctg ccgatgacgg tttactcgtc cgcgatttga acggcaacgg catcatcgac
       61 aacggcgcgg aactcttcgg cgacaatacc aaactggcag acggttcttt tgccaaacac
      121 ggctacgcag ctttggccga attggattca aacggcgaca acatcatcaa cgcggcagac
      181 gccgcattcc aatccctgcg tgtatggcag gatctcaacc aggacggcat ttcccaagct
      241 aatgaattgc gtacccttga agaattgggt atccaatctt tggatctcgc ctataaagat
      301 gtaaataaaa atctcggcaa cggtaacact ttggctcagc aaggcagcta caccaaaaca
      361 aacggtacaa ccgcaaaaat gggggattta cttttagcag ccgacaacct gcacagccgc
      421 ttcaaagaca aagtggaact cactgccgaa caggcaaaag ccgccaatct tgcgggcatc
      481 ggccgtctgc gcgatttgcg cgaagctgcc gcattgtccg gcgatttggc caatatgctg
      541 aaagcttatt ctgccgccga aactaaagaa gcacagttgg cattgttaga taatttgatt
      601 cacaaatggg cggaaaccga ttcgaactgg ggcaaaaaat cgccaatgcg actttcaacc
      661 gattggacgc aaacggctaa cgggggtgtg gctcttaccc cgtctcaagt aacgcgacta
      721 aaacagaacg ctttagtttc tctttccgac aaagccaaag cagctatcga tgccgcccgc
      781 gaccgcattg ccgtgcttga tgcctacacg gggcaggatt ccagcacact ctattacatg
      841 agcgaagaag acgcgcttaa tatcgtcaaa gtaaccaacg atacatacga ccatctcgcc
      901 aaaaacatct accaaaacct gttgttccaa acccgtttgc agccatattt gaatcaaatc
      961 agtttcaaaa tggaaaatga tacgttcact ttggatttta gtggtcttgt tcaagcattt
     1021 aaccatgtca aagaaactaa tccgcaaaaa gcttttgtgg atttggccga gatgcttgca
     1081 tatggcgaac ttcgttcttg gtatgaaggt cgaagactaa tggccgatta tgtggaggag
     1141 gcaaaaaaag caggtaaatt tgaagattac cagaaagtgt tgggtcagga gaccgttgca
     1201 ttattagcta aaacatcggg tacgcaagca gatgatatcc tgcaaaatgt aggctttggt
     1261 cataataaaa atgtttcttt atatggtaat gacggcaacg acactctaat cggcggcgcc
     1321 ggtaatgact a
//
LOCUS       DAWGKF010000239         1310 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.239, whole genome shotgun sequence.
ACCESSION   DAWGKF010000239 DAWGKF010000000
VERSION     DAWGKF010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1310)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1310)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1310
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.239"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(3..926)
                     /locus_tag="WHR07_002027"
     CDS             complement(3..926)
                     /locus_tag="WHR07_002027"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HEZ2131183.1"
                     /translation="MLQRTLAKSISVTGVGLHSGERVALTLHPAPENSGISFRRTDLD
                     GEMGEQIKLTPYLINDTRLSSTIVTDKGVRVGTIEHIMSALSAYGIDNALIELNAPEI
                     PIMDGSSLPFIYLLQDAGVVDQKAQKRFLKILKPVEIKEAGKWVRFTPYDGFKVTLTI
                     EFDHPAFNRSSPTFEIDFAGKSYIDEIARARTFGFMHEVEMMRAHNLGLGGNLNNAIV
                     IDDTDVLNPEGLRYPDEFVRHKILDAIGDLYIVGHPIVGAFEGYKSGHAINNALLRAV
                     LADETAYDRVEFADSDDLPDAFHELNIRNCG"
BASE COUNT          346 a          324 c          326 g          314 t
ORIGIN      
        1 cgttatccac aatttctgat gttcagctcg tgaaatgcgt cgggcaaatc atcgctgtcg
       61 gcaaattcca cccggtcgta agccgtttcg tctgccaaaa ccgcgcgcaa gagtgcgttg
      121 ttgatggcgt gtcccgattt gtagccttca aacgcgccga caatcggatg tccgacgata
      181 tacaaatcac cgatggcatc aaggattttg tggcgcacaa actcatcggg atagcgcaag
      241 ccttcaggat tcaggacatc cgtgtcgtca atcacgatgg cgttgttcaa attgccgccc
      301 aaacccagat tgtgggcgcg catcatttcc acttcgtgca taaagccgaa ggtgcgcgcg
      361 cgcgcgattt cgtcgatgta ggatttgccg gcgaaatcga tttcaaaagt gggcgagctg
      421 cggttgaaag ccggatggtc gaattcgatg gtcagcgtta ccttaaagcc gtcatacggc
      481 gtaaagcgca cccatttgcc cgcttctttg atttcgacag gcttgaggat tttcaaaaaa
      541 cgcttttgcg ccttttgatc gaccacgccc gcatcttgca aaaggtaaat aaacggcagg
      601 ctggagccgt ccataatcgg gatttcgggt gcgttcagct caatcagcgc gttgtcgata
      661 ccgtaggcgg acagcgcgga cataatgtgt tcgatcgtgc cgacgcgcac gcctttgtcg
      721 gtaacgatgg tggaggaaag gcgggtatcg ttgatcaaat aaggggtcag cttgatttgt
      781 tcgcccatct cgccgtccaa atcggtacgg cggaaggaaa tcccgctgtt ttcaggcgcg
      841 gggtgcaggg tcagtgcgac ccgttcgccg gaatgcaggc cgactccggt aacgctgatg
      901 gatttcgcca aagttctttg cagcataaac cgcttcctta tcaatggggt aagttgggga
      961 atgatacgat aaaaccggaa aaacaagcta tgtttttcca tagtatttgc caatgtatcc
     1021 gttttcaata cgtaagctgc ataaaaatgt atagtggatt aacaaaaatc aagacaaggc
     1081 gacgaacccg cctccctcct gaaaaacgca aaaaatgccg tccgaaaacc tttcggacgg
     1141 cattttcgcg tgaaccgtca ttcccacaag gacataaaac caaaacagaa aaccaaaaac
     1201 agaaacctaa aattcgtcat tcccacgaaa gtgggaatct agttcgttga gtttcagtta
     1261 tttagaataa attttgaaac ttaaatcccg tcattcccac gaacctacat
//
LOCUS       DAWGKF010000240         1290 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.240, whole genome shotgun sequence.
ACCESSION   DAWGKF010000240 DAWGKF010000000
VERSION     DAWGKF010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1290)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1290)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.240"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            166..1278
                     /gene="nadA"
                     /locus_tag="WHR07_002028"
     CDS             166..1278
                     /gene="nadA"
                     /locus_tag="WHR07_002028"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HEZ2131184.1"
                     /translation="MQTAARRSFDYDMPLIQTPTSACQIRQAWAKVADTPDRETAGRL
                     KDEIKALLKEKNAVLVAHYYVDPLIQDLALETGGCVGDSLEMARFGAEHEADTLVVAG
                     VRFMGESAKILCPEKTVLMPDLEAECSLDLGCPEEAFSAFCDQHPDRTVVVYANTSAA
                     VKARADWVVTSSVALEIVSYLKSRGEKLIWGPDRHLGDYICRETGADMLLWQGSCIVH
                     NEFKGQELAALKAEHPDAVVLVHPESPQSVIELGDVVGSTSKLLKAAVSRPEKKFIVA
                     TDLGILHEMQKQAPDKEFIAAPTAGNGGSCKSCAFCPWMAMNSLGGIKYALTSGRNEI
                     LLDRKLGEAAKLPLQRMLDFAAGLKRGDVFNGMGPA"
BASE COUNT          299 a          333 c          387 g          271 t
ORIGIN      
        1 accaaagcgg tttgtcggaa cgaagcgggt cggttttacg gtatcgcaaa cctgttttca
       61 gacgaccttg cttattatac tcaatttgag cataatataa aaatatttca aaatataaac
      121 ggcaaatctt tatgccgtct gaaaaaccag ccataaggaa gtctcatgca aaccgccgcc
      181 cgccgctcgt tcgattacga tatgcccctc attcaaacgc cgacttccgc ctgccaaatc
      241 cgtcaggcgt gggcgaaggt tgccgacacg cccgaccgcg aaacggcagg ccgtctgaaa
      301 gacgaaatca aggctttgct gaaggagaaa aacgcggtct tggtggcgca ttattatgtt
      361 gatccgctga ttcaggattt ggctttggaa acgggcggat gcgtgggcga ttcgctggaa
      421 atggcgcgct ttggtgcgga acacgaagcc gatacattag tggtggcggg cgtgcgtttc
      481 atgggcgaga gcgcgaaaat cctctgccct gaaaaaacag tgctgatgcc tgatttggag
      541 gcggaatgtt ctttggattt gggttgcccg gaagaggcgt tttcggcgtt ttgcgaccaa
      601 caccccgacc gcacggtggt ggtgtacgcc aacacttccg ccgccgtgaa agcgcgtgcc
      661 gactgggtgg taacgtcttc agtggcgttg gaaatcgtgt cgtatctgaa atcgcgcggc
      721 gagaagctga tttggggacc cgaccgccac ctcggcgact acatctgccg cgaaacgggc
      781 gcggatatgc tgttgtggca gggttcgtgc atcgtccaca acgaatttaa agggcaggag
      841 ctggcggcgt tgaaagcgga acatcccgac gcggtggtgc tggttcatcc tgaatcgccg
      901 caaagcgtca tcgaactggg cgacgtggtc ggctcgacca gcaaactgct caaggccgcc
      961 gtatcgcgtc ctgaaaaaaa attcatcgtg gcgaccgatt tgggcatcct gcacgaaatg
     1021 caaaagcagg cgcccgacaa agaatttatc gccgcgccga cggcgggcaa cggtggaagc
     1081 tgtaaaagct gcgcgttctg cccgtggatg gcgatgaatt cgctgggcgg catcaaatac
     1141 gccctgacaa gcggacgtaa cgaaatcctg ttggacagga agctgggcga agccgccaaa
     1201 ctgcctttgc agcgtatgct cgacttcgcg gcaggactca aacgcgggga tgtgttcaac
     1261 ggcatgggtc ccgcctgatt tgccgtccat
//
LOCUS       DAWGKF010000241         1278 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.241, whole genome shotgun sequence.
ACCESSION   DAWGKF010000241 DAWGKF010000000
VERSION     DAWGKF010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1278)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1278)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1278
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.241"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            57..782
                     /locus_tag="WHR07_002029"
     CDS             57..782
                     /locus_tag="WHR07_002029"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEZ2131185.1"
                     /translation="MPRFYLPENLSVGQTVALPDNIVRHLNVLRVRPNENITLFDGKG
                     KAHAAQLTVLEKRRAEAEILHEDTTDNESPLNITLIQSISSGDRMDFTLQKSVELGVT
                     AIQPVISERCIVRLDGERAAKRLARWQEIVISACEQSGRNTVPPVLPIIGYREALDKM
                     PSESTKLIMSINRARKLADIRQPSGAIVFMVGPEGGWTEQEEQQAFEAGFQAVTLGKR
                     ILRTETAPLAALAAMQTLWGDFA"
BASE COUNT          353 a          393 c          287 g          245 t
ORIGIN      
        1 gtccgtttcc atcacgccgc tgcgacagat tataaccgtc cgaaccgcca aaaactatgc
       61 cccgattcta cctgcccgaa aacctttccg tcggacaaac cgtcgccctg cccgacaaca
      121 tcgtccgcca cctcaacgtc ctacgcgtcc gccccaacga aaacatcacc ctcttcgacg
      181 gcaaaggcaa ggcacacgcc gcacagctga ccgttttgga aaaacgccgc gccgaagccg
      241 aaatcctgca cgaagacaca accgacaacg agtccccgct caacatcaca ctgatacaat
      301 ccatctcctc cggcgatcgc atggatttca ccctgcaaaa aagcgtcgaa ctcggcgtaa
      361 ccgccataca gcccgtcatc agcgaacgct gcatcgtccg cctcgacgga gaacgcgccg
      421 ccaaacgcct cgcacgctgg caggaaatcg tcatctccgc gtgcgaacaa agcggcagga
      481 acaccgttcc ccccgtactg cccatcatcg gctaccgtga agcactcgac aaaatgccgt
      541 ctgaaagcac caagctgatt atgagcatca accgcgcccg caaacttgcc gacatacgcc
      601 aaccgtccgg cgcaatcgtc tttatggtcg ggccagaagg cggctggaca gaacaggaag
      661 aacaacaggc atttgaagct ggctttcagg cggttacact cggcaaacgg attttacgca
      721 cagaaaccgc cccactcgcc gccctcgccg ccatgcagac gctttggggc gatttcgcat
      781 aaacagaaat gccgtctgaa acccgttcag acggcatttt gcagccgatt aagatagtag
      841 gttcaaataa gatttccctc gccgtcattc ccgcgaaagc gggaatctgg aaatttaatg
      901 ttgcggtgat ttatcggaaa tgactgaaac tcaacagact ggattcccgc ctgcgtggga
      961 atgacgagat tttaggtttc tgtttttggt tttctgttct cgcggaaata acgaaatttt
     1021 aagttttagg aatttgtcgg aaaaacagaa atcccccccc gccgtcattc ccgcaaaagc
     1081 gggaatctag aaacgaaaaa ctacagggat ttatccgaaa caacaaaccc tctccgccgt
     1141 cattcccgcg caggcgggaa tctagaaatt taacgttgcg gtgatttatc ggaaatgact
     1201 gaaactcaac gaaccggatt cccactttcg cggaaatgac aaagtggaag ttgcccgaaa
     1261 cttaaaacaa gcgaaacc
//
LOCUS       DAWGKF010000242         1247 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.242, whole genome shotgun sequence.
ACCESSION   DAWGKF010000242 DAWGKF010000000
VERSION     DAWGKF010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1247)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1247)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1247
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.242"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..570)
                     /gene="rfbA"
                     /locus_tag="WHR07_002030"
     CDS             complement(<1..570)
                     /gene="rfbA"
                     /locus_tag="WHR07_002030"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HEZ2131186.1"
                     /translation="MKGIILAGGSGTRLYPITRGVSKQLLPVYDKPMIYYPLSVLMLA
                     GIRDILVITAPEDNASFKRLLGDGSDFGISISYAVQPSPDGLAQAFIIGEEFIGNDNV
                     CLVLGDNIFYGQSFTQTLKQAAAQTHGATVFAYQVKNPERFGVVEFNENFRAVSIEEK
                     PQRPKSDWAVTGLYFYDNRAVEFAKQIKPS"
     gene            complement(633..>1247)
                     /locus_tag="WHR07_002031"
     CDS             complement(633..>1247)
                     /locus_tag="WHR07_002031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEZ2131187.1"
                     /translation="TPYAPSSPYSASKASSDHLVRAWQRTYGLPTIVTNCSNNYGPYH
                     FPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEGVVGETYNIGG
                     HNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDVRYAVDAAKIRRD
                     LGWLPLETFESGLRKTVQWYLDNKTWWQNVLNGSYRLERLGTGK"
BASE COUNT          273 a          308 c          356 g          310 t
ORIGIN      
        1 ggacggtttg atttgtttgg cgaactcgac ggcacggttg tcgtagaagt acaagccggt
       61 taccgcccaa tcggatttgg gccgttgcgg tttttcttcg atggaaacgg cgcggaagtt
      121 ttcgttaaat tcaaccacgc cgaaacgttc ggggtttttg acctgataag caaacacggt
      181 tgcgccgtgc gtttgcgctg ccgcctgttt caatgtttgc gtaaacgact gaccgtaaaa
      241 aatattgtcg cccaaaacca agcaaacatt gtcgttgccg ataaattctt cgccgatgat
      301 aaatgcctgt gccaagccgt ccggactggg ttgcacggca taactgatgg aaatgccgaa
      361 atcgctgccg tcgccaagca ggcgtttgaa agaggcgttg tcttcaggcg cggtaatcac
      421 caaaatatcg cggattcccg ccagcatcaa aaccgacaag gggtaataaa tcatcggttt
      481 gtcgtacacg ggcaggagct gtttggatac gccgcgcgtg atggggtaga ggcgcgtgcc
      541 gctgccgcct gccagtatga tgcctttcat ctttgttttc ttcctttgcg atgggttttc
      601 agacggcatt gcgtcgggat gccgtctgaa aactattttc cagtacctaa acgttccaaa
      661 cgatagctgc cgttcaatac attttgccac caggttttgt tgtccagata ccattgcacg
      721 gttttgcgga ggccggactc gaaggtttcc aaaggcagcc agcccaaatc ccgcctgatt
      781 ttggctgcgt cgacggcgta gcgtacgtca tggccggggc ggtcttgtac gaaagtaatc
      841 aaatcttcat aacgcgccac accggccggt ttttcgggag cgagttcttc cagcagggcg
      901 cagatggttt tgacgacttc aatattggct ttttcattgt ggccgccgat attgtaggtt
      961 tcgccgacaa caccttcggt aacaacctga tacagtgcgc gcgcgtggtc ttcgacaaac
     1021 agccagtcgc ggatttgcat accgtcgccg tacacaggca gcggtttgcc gtcaagcgcg
     1081 ttcagaatca tcaaaggaat gagtttttcc ggaaaatggt aaggaccgta gttgttggag
     1141 cagttggtta caatggtcgg caaaccgtaa gtccgctgcc acgcgcggac gaggtggtcg
     1201 ctggacgctt tagaggcaga gtaggggctg gacggcgcgt agggcgt
//
LOCUS       DAWGKF010000243         1191 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.243, whole genome shotgun sequence.
ACCESSION   DAWGKF010000243 DAWGKF010000000
VERSION     DAWGKF010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1191)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1191)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.243"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            388..543
                     /locus_tag="WHR07_002032"
     CDS             388..543
                     /locus_tag="WHR07_002032"
                     /inference="COORDINATES: protein motif:HMM:NF017953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase"
                     /protein_id="HEZ2131188.1"
                     /translation="MSERKTKPSPKKGVVFPFIKKLLSINEINPNDPTIGFILLSRNN
                     PDTDYES"
     gene            complement(633..1082)
                     /locus_tag="WHR07_002033"
     CDS             complement(633..1082)
                     /locus_tag="WHR07_002033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HEZ2131189.1"
                     /translation="MTDNRGFTLVELISVVLILSVLALIVYPSYRNYIEKAKINAVRA
                     ALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEGFCIRLNGIARGALDSKFMLKAV
                     AIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK"
BASE COUNT          400 a          259 c          173 g          359 t
ORIGIN      
        1 ttatgtctaa aggtgcaaac atgccttaaa ttaccatagt ggattaaatt taaatcagga
       61 caaggcgagg caacgctgta ctggtttaaa tttaatccac tatatattgc ataggcaaaa
      121 tacaagccta taacgaattg gaaacaaaat gccgtctgaa aacatcttca gacggcatta
      181 taaaatctgt tcaccttttc agatgagtaa tgtacaccct tatacaattt ttgctactat
      241 gccccataaa tccacggcta aagatatcct tattatgtcc tatgatttat cgaaacgact
      301 tgtaatcggc ttagcatcaa gtgccctatt cgacttatcc gaatcggata atatatttag
      361 aatggaaggg gcagaaacct ataggcaata tcagagagaa aaacaaaacc atcccctaaa
      421 aaaggcgttg tctttccatt tattaaaaaa cttctgtcaa tcaatgaaat aaacccaaac
      481 gacccaacga ttgggtttat tcttttatcc agaaacaatc cagatacaga ttacgagtca
      541 taactatagg cttaatatta cacgattttc attccatcaa ggcggaaaac cgcacaaata
      601 ctgaaacact atcgatcgat ttgtaaacaa gcctacttaa gtaacttgca gtccttatca
      661 tttcctttaa aataatccag cccgtcacta cacgaactgg cggacttctt gcaaataaag
      721 gttactagat tttcattcat cttaataata aaaggatttt tatctttatc tatggctacc
      781 gccttcaaca tgaatttact gtctaaggcc ccgcgcgcga ttccattcaa acggatacaa
      841 aagccttctg cctctttaat cggcaaactt ggccatttgg tagatgtttg tttaaatctc
      901 ccattctgca gataaaactt ttccataaaa tgtgcatttt ctaacaaggc tgcccgcact
      961 gcatttatct ttgctttctc aatataattg cgatagctcg gataaacaat taaagcaagt
     1021 acagacaata tcaagaccac tgatattaat tcaaccagcg taaacccccg attatcagtc
     1081 attactttac ttccaataag aacagattat tcaacatatt tctttgaaca gacttactat
     1141 cccattcaac agtatgcata tttcccactc tattttttag cggccggtat a
//
LOCUS       DAWGKF010000244         1189 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.244, whole genome shotgun sequence.
ACCESSION   DAWGKF010000244 DAWGKF010000000
VERSION     DAWGKF010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1189)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1189)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1189
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.244"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..429
                     /locus_tag="WHR07_002034"
     CDS             <1..429
                     /locus_tag="WHR07_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HEZ2131190.1"
                     /translation="AIPTQTVKELDGLLQESKNIGAVNTRINIANSTTRYTPMRQTGQ
                     PVSAGFEHVLEGHFHRPIANNRSVFTISPNELKVILQSNKVVSSPVSMTPDGQYMRTV
                     DVGKVIGTTSIKEGGQPTTTIKVFTDKSGNLITTYPVKGN"
     gene            436..945
                     /locus_tag="WHR07_002035"
     CDS             436..945
                     /locus_tag="WHR07_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131191.1"
                     /translation="MSNFEKKYILELNDALSHLNHNSTSFDLLKVLISWLSNDIVIDK
                     FKILGYDFSKYIEMNPDDYPVEKSILNREEIIYLKNNIYRKISSGNFKFQYFVQYIRD
                     ILEYLFIEHIERVCPYCEWGEMQKLEEQNTHETVYLCTQCGCAFYNDNSQFLLKTPLT
                     IPMKRDEFK"
BASE COUNT          405 a          216 c          205 g          363 t
ORIGIN      
        1 gctataccaa cccagacagt taaagaactt gatggcttac tacaagaatc aaaaaatata
       61 ggtgctgtaa atacacgaat taatatagcg aatagtacta ctcgatatac accaatgaga
      121 caaacgggac aaccggtatc tgctggcttt gagcatgttc ttgaggggca cttccatagg
      181 cctattgcga ataaccgttc agtttttacc atctccccaa atgaattgaa ggttatactt
      241 caaagtaata aagtagtttc ttctcccgta tcgatgactc ctgatggcca atatatgcgg
      301 actgtcgatg taggaaaagt tattggtact acttctatta aagaaggtgg acaacccaca
      361 actacaatta aagtatttac agataagtca ggaaatttga ttactacata cccagtaaaa
      421 ggaaactaac taaatatgag taactttgaa aaaaaatata ttttagaatt aaatgatgct
      481 ttaagccatt taaatcataa ctctacctca tttgatttat tgaaagtttt gatttcatgg
      541 ttatcaaacg atattgtcat tgataaattt aaaattttag gttatgactt tagtaaatat
      601 atcgaaatga atcccgatga ctatccggtt gaaaaatcta tattgaatag agaggaaatt
      661 atttatctca aaaacaatat ttatcgtaaa atatcatcag gaaattttaa atttcaatac
      721 tttgtacaat atattagaga tattttagaa tatttattta ttgaacatat tgaaagagtc
      781 tgtccttact gcgaatgggg tgaaatgcaa aaattagaag aacaaaatac gcatgaaacg
      841 gtgtatctct gtactcaatg tggatgtgct ttttataacg ataattcaca atttttatta
      901 aaaacccctt taaccattcc aatgaaacgt gatgaattta aataaacaag ccgtagcctg
      961 catgaaccct aaaatccacg tgtagcgtgt gtgcgccagc acgcatgcgt tccatgattt
     1021 acggctcaat gccgtctgaa aagctcacaa tttttcagac ggcatttgtt atgcaagtaa
     1081 atattcagat tccctgtatg ctgtacagac gcgggagtgt taagcccccc ttgtttgaag
     1141 ctccgcggct cctgccgagc ttcaccgacc ccgttgtgcc caagctctc
//
LOCUS       DAWGKF010000245         1158 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.245, whole genome shotgun sequence.
ACCESSION   DAWGKF010000245 DAWGKF010000000
VERSION     DAWGKF010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1158)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1158)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.245"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(239..1093)
                     /locus_tag="WHR07_002036"
     CDS             complement(239..1093)
                     /locus_tag="WHR07_002036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEZ2131192.1"
                     /translation="MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALP
                     ACRRHVGKIPREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFV
                     GHFFFNDKARAYHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMR
                     PTQRLIARIGAPAFTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGVGCGW
                     YAYWLWNKGMSRVPANVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV
                     AGRLSHQK"
BASE COUNT          326 a          345 c          301 g          186 t
ORIGIN      
        1 ctataaaatc ccgtcattcc cgcgcaggcg ggaatccgga catccaacgc tgcagcaatt
       61 tgtcggaaat aaccgaaact caaaaaaccg gatgcccgcc tgcgcgggaa tgacgatgca
      121 aagatggtcg ttatttcgga taaatatccg tcttttcgtt ccggataccc gctttcgcag
      181 gaatggagat ggaaagattt cagcctattc ggcaatcatc aaataccgct tcccaacttt
      241 atttttgatg cgacagccgg ccggcaacca aggtggcggc gatgacgaca aacacgccca
      301 aggcggacac gggcgacagg tgttcgccca aaatcaaaac cgccagcagc acgccgacga
      361 cgggttcgag cgaaatcaac agtcccgaca cgttggcagg aacacggctc atccccttgt
      421 tccacagcca ataggcgtac cagccgcacc ccacgcccaa atacagcagc gacaatacca
      481 ttccgacgct ccagtccacg gtataacttt gcgccaaagc aagcgaaaac ggcaggcaca
      541 tcaacgatgc ggcggcaatg gaaacagatg tgaatgccgg tgcgccgatg cgtgcaatca
      601 gcctttgcgt cggacgcata gcggcacaaa agcccgcgcc cgccaacaac accagcaggc
      661 agccgaacca gccgacttcg ccgccctctt ccgcaccgcc cgccatcagc agcgcgacac
      721 cggcaaatgc cgccgcgccg catatccagt ggtaggcacg cgctttgtcg ttgaagaaaa
      781 agtgtccgac aaacaccatc agcagcggct cgagtccgac aatgaccgat gcgctggcgg
      841 cggaagtgta tttcaacccg acaaactgaa gcagcagggt cagcacatag ttgacgaacg
      901 acacaatcag caacggcttc cattcctcac gcggaatctt gccgacatga cggcggcagg
      961 cgggcagtgc aggcagcgca gcaatcagca ggcgcacgcc gaccatcaat gcgggatcga
     1021 tgccgccata gacatatttg gcggcaataa acgagctgct ccagataatc agggcaagga
     1081 tttggtaaaa catagtgagt gataaagtca gatggtcata caaaagtata gcggattaac
     1141 aaaaatcagg acaaggcg
//
LOCUS       DAWGKF010000246         1144 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.246, whole genome shotgun sequence.
ACCESSION   DAWGKF010000246 DAWGKF010000000
VERSION     DAWGKF010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1144)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.246"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            32..>1144
                     /gene="tuf"
                     /locus_tag="WHR07_002037"
     CDS             32..>1144
                     /gene="tuf"
                     /locus_tag="WHR07_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEZ2131193.1"
                     /translation="MGHVDHGKTTLTAALTTILAKKFGGAAKAYDQIDNAPEEKARGI
                     TINTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREH
                     ILLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLSSYDFPGDDCPIVQGSALK
                     ALEGDAAYEEKIFELAAALDSYIPTPERAVDKPFLLPIEDVFSISGRGTVVTGRVERG
                     IIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVL
                     AKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVTLEEGVEMV
                     MPGENVTITVELIAPIAMEEGLRFAIREGGRTVGAGV"
BASE COUNT          296 a          328 c          300 g          220 t
ORIGIN      
        1 acgtagcaaa ccgcacgtaa acgttggcac catcggtcac gttgaccatg gtaaaaccac
       61 cctgactgcc gctttgacta ctattttggc taaaaaattc ggcggtgctg caaaagctta
      121 cgaccaaatc gacaacgcac ccgaagaaaa agcacgcggt attaccatta acacctcgca
      181 cgtggaatac gaaaccgaaa cccgccacta cgcacacgta gactgcccgg ggcacgccga
      241 ctacgttaaa aacatgatta ccggcgccgc acaaatggac ggtgcaatcc tggtatgttc
      301 cgcagccgac ggccctatgc cgcaaacccg cgaacacatc ctgctggccc gccaagtagg
      361 cgtaccttac atcatcgtgt tcatgaacaa atgcgacatg gtcgacgatg ccgagctgtt
      421 ggaactggtt gaaatggaaa tccgcgacct gctgtccagc tacgacttcc ccggcgacga
      481 ctgcccgatt gtacaaggtt ccgcactgaa agccttggaa ggcgatgccg cttacgaaga
      541 aaaaatcttc gaactggctg ccgcattgga cagctacatc ccgactcccg agcgtgccgt
      601 ggacaaaccg ttcctgctgc ctatcgaaga cgtgttctcc atttccggcc gcggtacagt
      661 agtaaccggc cgtgtagagc gcggtatcat ccacgttggt gacgagatcg aaatcgtcgg
      721 tctgaaagaa acccaaaaaa ccacctgtac cggcgttgaa atgttccgca aactgctgga
      781 cgaaggtcag gcgggcgaca acgtaggcgt attgctgcgc ggtaccaaac gtgaagacgt
      841 agagcgtggt caggtattgg ccaaaccggg tactatcact cctcacacca agttcaaagc
      901 agaagtgtac gtactgagca aagaagaggg cggccgccat accccgttct tcgccaacta
      961 ccgtccccaa ttctacttcc gtaccaccga cgtaaccggc gcggttactt tggaagaagg
     1021 tgtggaaatg gtaatgccgg gtgagaacgt aaccattacc gtagaactga ttgcgcctat
     1081 cgctatggaa gaaggcctgc gctttgcgat tcgcgaaggc ggccgtaccg tgggtgccgg
     1141 cgtg
//
LOCUS       DAWGKF010000247         1108 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.247, whole genome shotgun sequence.
ACCESSION   DAWGKF010000247 DAWGKF010000000
VERSION     DAWGKF010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1108)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1108)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1108
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.247"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(172..609)
                     /gene="rnhA"
                     /locus_tag="WHR07_002038"
     CDS             complement(172..609)
                     /gene="rnhA"
                     /locus_tag="WHR07_002038"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HEZ2131194.1"
                     /translation="MDTPVYLYTDGACKGNPGAGGWGVLMRYGSHEKELFGGEAQTTN
                     NRMELTAVIEGLKSLKRRCTVIICTDSQYVKNGMENWIHGWKRNGWKTAAKQPVKNDD
                     LWKELDTLVGQHQVSWTWVKGHAGHAENERADDLANRGAAQFS"
     gene            722..>1108
                     /locus_tag="WHR07_002039"
     CDS             722..>1108
                     /locus_tag="WHR07_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1971 domain-containing protein"
                     /protein_id="HEZ2131195.1"
                     /translation="MKERIVGQSGELFCFGQMPVWKAENLPEVLLSGYSSEEGEWVCL
                     NVLQGDVEVRTQDGAAEVWSAESGDCVFAPQQVFSVKLKTDDAEIRLSLYCAAADYFH
                     KKYGMSATHSAVAAARDTVPAGRALDM"
BASE COUNT          199 a          258 c          357 g          294 t
ORIGIN      
        1 ctggattccc gcctgcgcgg gaatgacggt ggagcggttt cagttgtttc taaataaatt
       61 tttgcagcgt tgggttttta gattcccgcc tgcgcgggaa tgacggtgga ggacgatgcc
      121 gtctgaatcc cattagcggt ttcagacggc attttcttgt cggtgcgaca gtcaggaaaa
      181 ctgcgctgcg ccacggtttg ccaaatcgtc ggcgcgttcg ttttccgcgt gtcccgcgtg
      241 tcctttaacc caagtccaac tgacttggtg ctgcccgacc agagtgtcga gttctttcca
      301 taaatcgtcg tttttgacgg gctgtttggc ggcggttttc cagccgttgc gcttccaacc
      361 gtgtatccag ttttccatgc cgtttttgac gtattgcgag tcggtgcaga tgatgacggt
      421 gcagcggcgt ttgagcgatt tcagtccttc gatgacggcg gtcagctcca tgcggttgtt
      481 ggtggtttgc gcttcgccgc cgaaaagttc tttttcgtgg ctgccgtagc gcatcaacac
      541 gccccagccg cccgcgccgg gattgccttt gcacgcgccg tcggtgtaaa ggtaaacggg
      601 tgtgtccata ttgtgccttt gtgtggtgtc cggcgtgatt ataagcggtt tgcgcgccgt
      661 gccgtctgaa agattgcggc ggattgaaat aggcatataa tgtgcaactt tatttttgaa
      721 tatgaaagag cggatagtgg gtcaaagcgg cgagttgttt tgtttcgggc aaatgcccgt
      781 atggaaggcg gaaaacctgc cggaagtttt gttgtcgggc tattcgtccg aggaagggga
      841 atgggtctgc ctgaatgtgt tgcagggcga tgtcgaagtc cgcacgcagg acggggcggc
      901 ggaggtttgg tcggcagaaa gcggcgattg cgtgtttgcg ccgcagcagg tgttttcggt
      961 caaactgaaa acggacgatg ccgaaatccg tttgtcgctg tattgcgcgg cggcagacta
     1021 ttttcacaaa aaatacggga tgagtgccac gcattctgcg gtcgcggcgg cacgggatac
     1081 cgtaccggcg ggcagggcgt tggatatg
//
LOCUS       DAWGKF010000248         1100 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.248, whole genome shotgun sequence.
ACCESSION   DAWGKF010000248 DAWGKF010000000
VERSION     DAWGKF010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1100)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1100)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.248"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            430..>1100
                     /locus_tag="WHR07_002040"
     CDS             430..>1100
                     /locus_tag="WHR07_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ2131196.1"
                     /translation="MSNWKPDIPYNDLPPLPPKQDIESKTILKRCITARASLARLKQA
                     AELIPNQAMLINTLPVMEARASSEIENIVTTTDKLFQSLQMDTERQDPATKEALQYRT
                     ALFAGYESLTSRPLCTQTAIMVCNAIKHPYEMAIRKTGGTALKGGNSGNVVYTPPEGE
                     ETIRGKLANWERFIHESGDLDPLIIMAAAHYQFEAIHPFTDGNGRTGRILNSLLLIEK
                     GLLDLP"
BASE COUNT          329 a          263 c          235 g          273 t
ORIGIN      
        1 tttctgtttt tgattttctg ttttcgtagg aatgacggtt taaaagttac ccgaaacctc
       61 aaaaaaaagg ctgtgtttta atatagtgtt gatagacgta cttggcttcc atgtattcaa
      121 tcgtggaaat ctatatcttc gtcctcgccg aaatagtcta tgcccgatat acaattttga
      181 tacacaaact tggaaatatg ggtatcgtcg ccggagcgat agaatgcgga cagttatata
      241 tatacggttt ttttagggaa gcgggcagat gaagggcgga ttttgaatta accccatgca
      301 aattgacttt tgcaggcggt tttacctccc atatatttac aaaagccaaa tttttaaaca
      361 tatatccttg atatatacac ggcgtaaaca tatactggaa acatctttaa attttccgaa
      421 attttaaata tgagcaactg gaaacccgat attccctata acgatttacc acccctgccg
      481 ccaaaacagg atattgaaag caaaaccatc ctgaaacgtt gtataaccgc ccgtgcatcc
      541 cttgcccgtt taaagcaggc ggcagaactg ataccgaatc aagccatgct gattaacacc
      601 cttcctgtta tggaagcccg tgcaagttcg gaaattgaaa acatcgtaac cacaacggat
      661 aagctgtttc aatccctgca aatggatacg gaacggcaag accctgccac gaaagaagcc
      721 ctgcaatacc gcaccgccct gtttgcaggc tatgaatcac tgacgagccg ccctttatgc
      781 acacaaaccg ccatcatggt ctgcaacgcc atcaagcacc cctacgaaat ggccatccgc
      841 aaaacaggcg gcacagccct aaaaggaggc aacagcggaa atgttgtcta taccccgccc
      901 gaaggagaag aaaccatacg cggcaagctg gcaaattggg agcggtttat tcacgaaagc
      961 ggcgatttag acccgcttat catcatggcg gcggcacatt accaatttga agccatccat
     1021 ccgtttacgg acggcaacgg gcggacgggg cgcatattga acagcctgct attgattgaa
     1081 aaagggcttt tggatttgcc
//
LOCUS       DAWGKF010000249         1070 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.249, whole genome shotgun sequence.
ACCESSION   DAWGKF010000249 DAWGKF010000000
VERSION     DAWGKF010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1070)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1070)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.249"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(122..550)
                     /locus_tag="WHR07_002041"
     CDS             complement(122..550)
                     /locus_tag="WHR07_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mor transcription activator family protein"
                     /protein_id="HEZ2131197.1"
                     /translation="MGFEKVEHLLPDTVLDIVDVIGLAATEQLVKAIGGARFKFGKGK
                     VDTERLAILVEAIGEVKTHELLQVYGGEELYVPRCGKALIQLRNHRFYQEFVKLRDID
                     KESGLMAMTKLCPKYGISSRTGYTIINEMSRPAAQQAALF"
     gene            complement(531..965)
                     /locus_tag="WHR07_002042"
     CDS             complement(531..965)
                     /locus_tag="WHR07_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gp16 family protein"
                     /protein_id="HEZ2131198.1"
                     /translation="MRRALIAKIKIAQKELGLDDGTYRAVLERVTDKRSCADMDVSEL
                     ESVVADMRSHGFKPKAKGNPHGKPHLRRTSSAAMLDKVEALLTVGGKHWNYAHAMARR
                     MFGKDKVEYLDDTQLHKLVAALQIAENRKTEKAGGDDGVRKS"
BASE COUNT          278 a          318 c          191 g          283 t
ORIGIN      
        1 tttgaaaacc ccattaaacc gtctttaacc catcgtcccg aacggtagat gtttcacccc
       61 tgcaaaccaa aaaaaagacc gtctgaatac agacggccaa agcctggtca cacatcactg
      121 cctaaaataa agctgcctgc tgtgccgcag gtcggctcat ttcattgata atcgtatatc
      181 ccgttcgtga agagatgccg tatttagggc atagcttcgt catcgccata agcccgctct
      241 ccttatcaat atcgcgcaat ttgacaaact cctgataaaa cctatggttt ctcaactgta
      301 ttaacgcctt gccgcaccgt gggacataca attcctcgcc accatatacc tgcaacagct
      361 catgtgtttt cacttcgccg atggcttcga ccaaaattgc caaacgctcg gtgtccacct
      421 tgcccttacc aaatttaaac cgcgccccgc caatcgcctt gaccagctgt tccgtcgctg
      481 ccagtccgat gacatccaca atgtccaaca cggtatccgg caataaatgt tcaacttttt
      541 cgaaccccat catccccacc cgctttttcc gttttcctgt tttccgcaat ctgcaacgca
      601 gcaaccagtt tatgtagctg cgtatcgtct aaatattcga ccttatcctt accaaacatc
      661 cgccgcgcca ttgcgtgtgc atagttccaa tgtttgccgc cgacggtcag cagggcttcg
      721 actttgtcca gcattgccgc tgatgatgtc cgacgcagat gcggtttgcc gtgtgggtta
      781 ccttttgctt taggcttaaa tccgtgcgac cgcatatcag cgacaacaga ctcaagttca
      841 gaaacatcca tatccgcaca cgaccgctta tccgtcacac gctccaacac cgcgcgatag
      901 gtaccgtcat ccaagcccag ctccttttga gcaatcttaa ttttcgcaat caacgcccgg
      961 cgcattatct ctctaataca acatatagta taaattagcg cattttatac aataaaatac
     1021 aatatatatt attaagccga tgtttttttg cgaaacggac agacataaaa
//
LOCUS       DAWGKF010000250         1032 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.250, whole genome shotgun sequence.
ACCESSION   DAWGKF010000250 DAWGKF010000000
VERSION     DAWGKF010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1032)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.250"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(299..685)
                     /locus_tag="WHR07_002043"
     CDS             complement(299..685)
                     /locus_tag="WHR07_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEZ2131199.1"
                     /translation="MRKILLDTHALLWWLLDDKKLGTSARKLIENPRNAIFVSAASIW
                     EISIKQNKGLLKLPEEFFDVLQEEDFEMLPIGLFHAKQAGSLPEIHKDPFDRMLIAQT
                     QAEGFELMTVDEYIPQYGIRVVNASS"
     gene            complement(682..927)
                     /locus_tag="WHR07_002044"
     CDS             complement(682..927)
                     /locus_tag="WHR07_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HEZ2131200.1"
                     /translation="MFQANIHQAKTNLSQLIQRAEAGEIVIIAKAGKPCVQLTGIEKP
                     ARNAGRLKKFSHMGNTDISRILEDDNETAALFEESAL"
BASE COUNT          278 a          243 c          185 g          326 t
ORIGIN      
        1 cagccatata tattaagtac ctgctcttta tgcgcttttt taggaaagga agatcaaacg
       61 gttcaatagc gaagtcttgc ccaaatttga tggacaggat atagaataca tgcgtgcata
      121 ccacaccctg ccaaagttgg gagatgcact taaggttgca cttgtggtcg ccaactatgc
      181 ctatacacgc ggatttcccg cgtttatagg ccgcgacgga agtctggctt ttaagcgaag
      241 acaataaccg aaaagaccgc ctcggcggtc tttcttgtgt acacagtttt tgtatttgtc
      301 agcttgatgc attgacaact ctaattccat attgcggaat atattcatcg acagtcatca
      361 gttcaaagcc ttccgcttgg gtttgtgcaa tcaacatcct atcgaaaggg tctttgtgta
      421 tttccggaag gcttccagcc tgttttgcat gaaacagacc tataggcagc atttcaaaat
      481 cctcttcttg aagcacatca aaaaactctt ccggtaattt caacaacccc ttgttctgct
      541 tgatggaaat ttcccaaata cttgctgcac tgacaaagat cgcatttctc ggattttcta
      601 tcagtttgcg tgcagatgtc cccagtttct tgtcatccaa caaccaccac agcaaagcat
      661 gggtatcaag cagaatcttt ctcacagagc cgactcctca aataaagctg ccgtttcatt
      721 gtcatcctca agaatacgtg aaatatccgt atttcccata tgactgaatt ttttcaacct
      781 tcctgcattt cgtgccggtt tttcaatacc ggttagttgg acgcaaggct tacctgcttt
      841 cgcaataata acgatttccc ctgcttctgc tctttgaatc aattgactca aattggtttt
      901 tgcctgatga atatttgctt gaaacataac acttctcatg attagctaac ttaactaata
      961 tacatcatta ccaagatttt gggaatctca ttacatatat ttgattatat ccgccgtttt
     1021 attcacacct tg
//
LOCUS       DAWGKF010000251         1019 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.251, whole genome shotgun sequence.
ACCESSION   DAWGKF010000251 DAWGKF010000000
VERSION     DAWGKF010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1019)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.251"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..100
                     /locus_tag="WHR07_002045"
     CDS             <1..100
                     /locus_tag="WHR07_002045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ2131201.1"
                     /translation="IGRDKLFIHPRLMELLRGEGNSFTSFQSLVKA"
     gene            130..1008
                     /locus_tag="WHR07_002046"
     CDS             130..1008
                     /locus_tag="WHR07_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ2131202.1"
                     /translation="MARRSKTFEEAAAEVEERFGHRGIKLVEFEGTAKPCVINCPKHG
                     NQTCSRYSNMFIGSSWGCPSCGNEQAAKAGIATLRKNHIALEMLKQAVTGMTKQERIT
                     TQAYNEMTKSVAGSNSIVLNDVQGDTTINNHHTHTHNHSDADGKALSMRLTPRPLLSD
                     RQAAAFARTGKLTGSFDLFASVVAPSQYTFAVAMPDTSMSPVIEKGDLLVVEPRMRPA
                     DEDIVLIELSDKRLVVAHLVIDIAGRMLIYQTGRPSEALDLPEGSVILGVVLEVKKRF
                     MSAAQARRRVDSDYRP"
BASE COUNT          264 a          260 c          276 g          219 t
ORIGIN      
        1 catcggcagg gacaaactat tcattcatcc gcgcctaatg gaactattgc ggggagaggg
       61 caacagcttt acctcattcc aatccctcgt taaagcatag ccaaaataat caataatccg
      121 gaggtcaata tggcaagaag gtcaaaaaca tttgaagaag ctgctgctga ggttgaggaa
      181 cgtttcggtc atcgtggcat taagttggtc gagtttgagg gtacagccaa gccgtgtgta
      241 atcaactgcc ctaaacatgg aaaccaaacc tgttcgaggt actccaatat gttcatagga
      301 agtagctggg gttgcccctc ttgtggtaat gagcaagctg caaaagccgg tatagcgacc
      361 cttaggaaga atcacatagc gttagaaatg ctgaaacagg ctgtaacagg tatgaccaag
      421 caagagcgca tcacgacgca agcctacaat gagatgacca aatccgtggc aggttcaaac
      481 agcatagtcc ttaacgatgt ccaaggcgat acgaccatca acaaccatca tacgcatacg
      541 cacaaccaca gcgatgccga cggcaaagca ctgtcgatga ggctcacacc acgccccctg
      601 ttgtcagacc gtcaggcggc ggctttcgcc cgtacaggca aactcacagg cagtttcgac
      661 ttgtttgctt cggtggtcgc cccctcgcag tacacgtttg ccgttgccat gcccgacacg
      721 tccatgtcgc cggttatcga aaagggggat ttgctggtgg tcgagccgcg tatgcgccct
      781 gcggacgaag acatcgtact gattgaactg tccgacaagc ggctggtcgt cgcgcacctt
      841 gttatcgata ttgcgggcag gatgctgatt tatcagacgg gcaggccgtc tgaagccctc
      901 gacctgcccg aaggcagcgt gattttaggt gtggtgctgg aggtcaaaaa acggtttatg
      961 tccgccgcac aggcaagaag gcgtgttgat tcggattacc gcccctgatg tgtggacgg
//
LOCUS       DAWGKF010000252         1012 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.252, whole genome shotgun sequence.
ACCESSION   DAWGKF010000252 DAWGKF010000000
VERSION     DAWGKF010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.252"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(137..769)
                     /gene="mtrR"
                     /locus_tag="WHR07_002047"
                     /pseudo
     CDS             complement(137..769)
                     /gene="mtrR"
                     /locus_tag="WHR07_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503796.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     repressor MtrR"
BASE COUNT          245 a          218 c          259 g          290 t
ORIGIN      
        1 agattgagca taaaatttta gtaacctatg ttattgcaaa ggtctcaata tgtattttta
       61 gaagaaggct ttgtgtcatt ttgatgccgt ctgaaagggt ttgttcgttt cagacggcat
      121 tgttaccaag gcttgattat ttccggcgca ggtcgggatg gttttccaag ttgtccatca
      181 ttatcccgat gatgcgcggg gcggttttgc ccaaatcgaa acgttcgcag gaagagaacc
      241 accgccaaat cagcccgtcc aaggttgatt tgatgaagat gaccgccgtt tccttgtcca
      301 aatcgtcagc caaatcctga ttttccaccg cttcggtcaa aacggcggta attttctcgc
      361 gccagattgc ctgatgcttg cgggcaatgg cgataacggc ggcgttttgc tccgtgtgtt
      421 cgcattttaa aaacaggatg ttgtggaatt tgtagtagat gtcgttgctt tacagccgct
      481 cgaaaaagtg cagcagcgtg tggcggaata ccgcccaaga ccctccttcg gcatcttcgg
      541 tatcttgcgc gatgcagttt tcgatgtcgt cgcagatacg ttggaacagc gcgtcgaaca
      601 agtcttcctt atttttgaaa tgccaataga gcgcgccgcg cgttacgccg gcggcttggg
      661 cgatttcgtt gagcgaggtg cgcgcaatcc ctttgcggta aaaggtttcc aaggcggcaa
      721 gcatcaggtg ttctttggtt ttcaaggctt cggttttggt ttttctcata atggtgtttt
      781 cgtttcgggt cggtttgatg agggcggatt ataaaaaaga ctctgtaacc atgcaatcgt
      841 gtatgtataa tgaaacccat gaaattgaga ctacatctca actttgaaaa caggcataac
      901 ctgctttgca acccgttcga acattcgggt atcaaagcag gcggttttta tatcctgaaa
      961 tatagtggat taacaaaaat caggacaagg cgacgaagcc gcagacagta ca
//
LOCUS       DAWGKF010000253         1006 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.253, whole genome shotgun sequence.
ACCESSION   DAWGKF010000253 DAWGKF010000000
VERSION     DAWGKF010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1006)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.253"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..>1006
                     /locus_tag="WHR07_002048"
     CDS             <1..>1006
                     /locus_tag="WHR07_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="iron-regulated protein frpC"
                     /protein_id="HEZ2131203.1"
                     /translation="IERSYYKAVTDNGVSSSAAIDLVINRSLPDMADGYWALGLGIEA
                     ERIHNEQAVNNPNGSERDNRKQLISALDKGFDGSFKEKHFTFLQSVMMDLTKLGVEYT
                     IDGWQKIGGWGNGIINDLYKSVVKREWTGIFEIVNNNIKQGNEAFKNEINSLVHDMKA
                     AGKEFGDDLNTQWNNLTQAAEIIYNDIVDNTSQGIEKGVKAIKELSEKMKNAASDLAD
                     GSAEKAKQVVEDLAQAAKEAYENAKSTAEKAAQAAREFFKGLPSFKDLAEKFRDLFPN
                     PEGWIDDGHQCLAPWVKETKKRNGKYHVYDPLALDLDGDGIETIATKGFAGALFDHRN
                     "
BASE COUNT          350 a          161 c          232 g          263 t
ORIGIN      
        1 aaattgagag aagttactat aaagccgtta ccgataatgg cgtttcttcc agtgcagcta
       61 ttgatttagt tattaatcgt tcacttccgg atatggcgga tggttattgg gcattaggtt
      121 tggggataga agccgaacgt atccacaatg agcaagcagt aaataatccg aacggtagcg
      181 aaagggataa tagaaagcag ttaatatctg ctttagataa aggatttgat ggatctttta
      241 aagagaagca ttttactttt ttacaatctg tgatgatgga tctaacaaag ttaggtgttg
      301 aatatacaat agatggttgg caaaaaattg gaggttgggg taatgggata atcaatgatt
      361 tatataaaag tgttgtaaaa agagagtgga ctggaatatt tgagatcgtt aataataaca
      421 tcaagcaagg aaatgaagct tttaaaaatg aaatcaatag cttggttcat gatatgaaag
      481 ctgctggcaa ggaatttgga gatgacttaa atacacagtg gaataatctc actcaggctg
      541 ccgaaataat ctataatgac atagtagaca atactagtca aggaatagaa aaaggtgtca
      601 aagccattaa agaattgtct gaaaaaatga aaaatgctgc ttccgatttg gctgacggtt
      661 cagcagagaa agctaaacaa gtagtggaag atttggctca agccgccaaa gaagcatacg
      721 aaaatgccaa atccacagcc gagaaggctg ctcaagcagc tcgagaattt tttaagggct
      781 tgcccagttt taaagatctg gccgaaaaat ttagagatct gttcccaaat ccggaaggct
      841 ggatcgatga tggtcaccaa tgtttagctc cttgggttaa agaaactaaa aaacgcaatg
      901 gcaaatatca tgtctacgac ccccttgccc tagacctaga tggcgacggt atagaaacca
      961 ttgccaccaa aggctttgca ggtgcattgt tcgaccaccg caatca
//
LOCUS       DAWGKF010000254          905 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.254, whole genome shotgun sequence.
ACCESSION   DAWGKF010000254 DAWGKF010000000
VERSION     DAWGKF010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 905)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 905)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.254"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..215
                     /locus_tag="WHR07_002049"
     CDS             <1..215
                     /locus_tag="WHR07_002049"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131204.1"
                     /translation="DAGDVYCVYNIRLKQYTACQVTRVEEHGGKKTHATLLALDWQGN
                     KPLGAEELADLKPLYKDLKNNIGNIV"
     gene            546..>905
                     /locus_tag="WHR07_002050"
     CDS             546..>905
                     /locus_tag="WHR07_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131205.1"
                     /translation="MYWERGLHMYKASAVVPTGYVRVGNTAPLVGEDTQRYASFWGDG
                     YDVYRQLRWQQIPEKQRKAFKKAAKSKKTVMFAGREYGISKQNLSDVWDDFEDAMELK
                     AFPCLSSLFLTKWHKNLY"
BASE COUNT          282 a          147 c          211 g          265 t
ORIGIN      
        1 ctgatgccgg agacgtatat tgcgtctata acatcagact gaagcagtac actgcctgcc
       61 aggttacccg agttgaagaa cacggtggca aaaaaacaca tgcgaccctg ctggctttgg
      121 actggcaggg caacaaaccg cttggggcgg aggagctggc ggatttgaaa ccactttaca
      181 aagacttaaa gaataatatt ggaaatattg tatgaacaaa aaattaaact atatttttat
      241 gttggactgt ttagggttgg tgatattgtt tacttgtata atagctactt ttgaaagaga
      301 ttatggattt aaaattttta ctaattctaa gaggcctgaa ttttattatt ggattggaat
      361 gttttattat ggaattattt cttgctggtt tgattatcaa ttaatttcaa caaaggcgaa
      421 ttcgtataaa agaaaagtta aacaatataa aattttttca gtaatatttt cagttttgat
      481 atttatttct actatagtaa aactttaaat tttggagcaa aaatttatga gcgattcaat
      541 tgaatatgta ttgggaacgc ggtctgcaca tgtataaggc aagtgctgtc gtgccaacgg
      601 gatatgtacg ggttgggaat accgcgccgc tggtcggcga agacacgcaa cggtatgcct
      661 ctttttgggg cgacggctac gacgtgtacc gtcagttgag atggcagcag atacccgaaa
      721 aacagagaaa ggcattcaaa aaagccgcca aaagcaaaaa gaccgtgatg tttgccggac
      781 gggaatacgg catatccaaa cagaatttga gcgatgtttg ggatgatttt gaagacgcga
      841 tggaactgaa ggcgtttccc tgcctgtctt cgctgtttct gaccaagtgg cataaaaatc
      901 tatat
//
LOCUS       DAWGKF010000255          888 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.255, whole genome shotgun sequence.
ACCESSION   DAWGKF010000255 DAWGKF010000000
VERSION     DAWGKF010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 888)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 888)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.255"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(93..644)
                     /locus_tag="WHR07_002051"
     CDS             complement(93..644)
                     /locus_tag="WHR07_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131206.1"
                     /translation="MKVLNGWSDRKMWRVLNALPIGVVFFDLIYGFVLNVLQGLDLQR
                     AVPDLEGVLAVTPDIAFNSLQIVANGGMAAVVCFGLAVVFLLNRSVRRRQVLEIGVFQ
                     MLGLVAVLAFSAPSVWEWANALPLLLKGADVVNTGNARYVLTALCMPFPAVSCVIGLV
                     GRFRLQTASGRAAKSGGAGKADG"
     gene            complement(698..888)
                     /locus_tag="WHR07_002052"
                     /pseudo
     CDS             complement(698..888)
                     /locus_tag="WHR07_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_060537127.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          249 a          307 c          164 g          168 t
ORIGIN      
        1 agcaaagaaa ccgccattag cactacaccc ccccaagctg cggctgccaa acacatcggc
       61 tgcttctcga cgcacccgct gaaaaatgcg tcctatccgt ccgccttgcc cgcaccccct
      121 gactttgccg ccctgcccga tgccgtctga agcctgaacc gccccaccag cccgatgacg
      181 cacgacaccg ccggaaaggg catacacaaa gccgtcagca cataacgcgc attccccgta
      241 ttgaccacgt ccgcgccctt cagcagcagc ggtagcgcgt tcgcccactc ccacaccgac
      301 ggcgcgctga acgccaatac cgccaccagc cccaacatct ggaacacccc gatttccaac
      361 acctgccgcc gccgcaccga acggttgagc aaaaacacaa ccgccaaccc gaaacagacc
      421 accgccgcca taccgccgtt ggcgacaatc tgcaaactgt tgaatgcaat atcgggcgta
      481 accgccaaca cgccttccaa atccggcacg gcacgctgca aatccaaacc ctgcaacaca
      541 ttcaacacaa aaccgtagat caaatcaaaa aacaccacgc ctatcggcaa agcattcaaa
      601 acccgccaca tcttcctgtc cgaccaaccg ttcaaaactt tcattttacc cgaccacgca
      661 agccgccgaa caaaaaataa ggggctgtcc tagataacta ggacaaactt gattttacta
      721 attgttttaa aatggaacaa gaacttttat ctcactgttg ttaaaacgtc gttcgcactc
      781 ctttaaatac agctcaaaat gcgctttggg aatgccgtta aacttgcgta aatgacgttt
      841 tgcctggttc caaaagttct caattccatt aatatggttt tgtcgttc
//
LOCUS       DAWGKF010000256          867 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.256, whole genome shotgun sequence.
ACCESSION   DAWGKF010000256 DAWGKF010000000
VERSION     DAWGKF010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 867)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 867)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.256"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(48..827)
                     /locus_tag="WHR07_002053"
     CDS             complement(48..827)
                     /locus_tag="WHR07_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HEZ2131207.1"
                     /translation="MKLVRPQKISDQVLSVLEGRIVEGVYAEGGKIPPERVLAEEFGV
                     SRPSVRSALNVLVARQVLEARQGDGYYVSVKPQQDFLQSWQELLGKHSNWEQDVFDFS
                     CHIEGCMAALAAERRTDADLKRIGFWLEKFEEACESGNLEHQSEADVSFHQTIADAAH
                     NLLFSHLSGGLLKMLYRQTRSSLIYLNQEEDPRPKLMAQHRVLYEAISNRRPGEASEA
                     AKAHLNYVASSIMKDREYQSRNRHADTLAQNDLKRVQDWEV"
BASE COUNT          200 a          288 c          173 g          206 t
ORIGIN      
        1 ttcactatac cgatacatcc gaatatgcca gaccgtctaa acggtattca tacctcccaa
       61 tcctgcacgc gcttcaaatc gttttgcgcc aaagtatccg cgtggcggtt acggctctga
      121 tattccctgt ctttcatgat gctgcttgcc acataattca aatgtgcctt tgccgcctcc
      181 gaagcctcgc ccggccgacg gttcgatatc gcctcataca gcacgcggtg ctgcgccatc
      241 agtttcggac gcggatcttc ttcctgattc agataaataa ggctgctgcg cgtctgccgg
      301 tacagcattt tcaacaaacc gcccgacaaa tggctgaaca acaaattgtg cgccgcatcc
      361 gcaatcgtct gatggaagct gacatcggct tcgctctgat gttccagatt gccgctttcg
      421 cacgcctcct caaacttttc aagccaaaac ccaatccgct tcaaatcggc atccgtccgg
      481 cgttctgccg ccaatgccgc catacagccc tcgatgtggc agctgaaatc aaaaacatcc
      541 tgttcccaat tggaatgctt gcccaaaagc tcctgccaac tttgcaaaaa atcctgctgc
      601 ggcttgaccg aaacataata accgtctccc tgcctcgctt ccaaaacctg acgggcgacc
      661 aaaacattca atgccgacct gaccgacggg cgggacacgc cgaactcttc cgccaaaacg
      721 cgttcgggcg gaatcttgcc cccttccgcg taaacccctt ccacgatgcg gccttccaat
      781 accgacaata cctgatcgct gattttctga ggccttacca gtttcatcac tcctccttta
      841 taaagattcc ctgccgaacc cttccga
//
LOCUS       DAWGKF010000257          805 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.257, whole genome shotgun sequence.
ACCESSION   DAWGKF010000257 DAWGKF010000000
VERSION     DAWGKF010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 805)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 805)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..805
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.257"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..743)
                     /locus_tag="WHR07_002054"
     CDS             complement(join(<1..524,524..743))
                     /locus_tag="WHR07_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242698.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEZ2131208.1"
                     /translation="MARTAITDNIWEQLQTTMKAHGCHQWKNDRTVMEAILWKLRTGA
                     PWRDIPIELGSWKTAYNRFNRWSKKGLWQKFFFDLRKEIDKEWVFIDGSYVRCHQHAS
                     GARRGFDRAIGQSRGGNTTKIHLCVDSHGNPLDFKVTGGNVHDGQVANDLIEVIQEAQ
                     YFIADKGYDSQEIRDKAIEHGMKAIIPKRKNAKKPNPDFDSYLYKLRHLVENAFARLK
                     QFRSIATRYEKLARNFKSMLYLACSIIHAK"
BASE COUNT          193 a          175 c          160 g          277 t
ORIGIN      
        1 cttagcatga ataatagagc aagccaagta aagcatcgat ttaaaattac gagctaattt
       61 ctcatagcga gtagcaatac tacgaaactg ctttaatcgt gcaaatgcat tctcgactaa
      121 gtggcgtaat ttataaaggt agctatcaaa atcagggtta ggtttcttgg catttttacg
      181 ctttggtata atagctttca taccgtgttc tatcgcttta tctctgattt cttgcgagtc
      241 ataccctttg tcagcgataa aatactgggc ttcttgtatg acttctatca agtcgtttgc
      301 aacttgaccg tcgtgcacgt tacccccagt gactttaaaa tcgagcggat ttccatgcga
      361 gtccacacat aggtgtattt ttgtcgtgtt tccgccacgg ctttgtccaa ttgctctatc
      421 gaaaccacgc cgagctccac ttgcatgttg atgacaccgt acataacttc cgtcgatgaa
      481 tacccattct ttgtcaattt cttttcgtag atcaaaaaaa aattctgcca caagcctttt
      541 ttagaccatc ggttaaagcg gttataagcg gttttccatg accctagctc aataggtatg
      601 tctcgccatg gtgcacctgt tcttagcttc catagtatgg cttccatcac ggtacggtcg
      661 ttcttccatt gatgacagcc gtgcgctttc atggttgttt gtaattgttc ccatatgttg
      721 tcagttattg cggttctcgc cattgtttgt gtttgcctat atttcgttgg aatatagggt
      781 taaaataggg ctcttttggg cttat
//
LOCUS       DAWGKF010000258          771 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.258, whole genome shotgun sequence.
ACCESSION   DAWGKF010000258 DAWGKF010000000
VERSION     DAWGKF010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 771)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 771)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.258"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            87..605
                     /locus_tag="WHR07_002055"
     CDS             87..605
                     /locus_tag="WHR07_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131209.1"
                     /translation="MKQMLLAVGVVAVLAGCGKDAGGYEGYWREKSDKKEGVIAVKKE
                     KGNYFLNKINVFTGKEESLLLSEKDGALSINTGIGEIPIKLSDDGKELYVERRQYVKT
                     DAAMKDKIIAHQKKCGQTAQAYLDARKALPSNQTYQQRQAAIEQLKRRFEAEFDELEK
                     EIKCNGKPTLLL"
BASE COUNT          226 a          157 c          221 g          167 t
ORIGIN      
        1 caactatagt ttttgcaaat caatattgac aagctgaaaa aaaaaacaat atactcgctc
       61 ggtcttaatg ttaacggagt atggaaatga aacaaatgct tttagccgtc ggcgtggtgg
      121 cggtgttggc gggctgcggc aaggatgccg gcggttacga gggttattgg cgcgaaaagt
      181 cggacaaaaa agagggcgtg attgccgtca aaaaagaaaa aggcaattac ttccttaata
      241 aaatcaacgt atttacaggc aaggaggagt ctttgctttt gtctgaaaaa gacggcgcgc
      301 tttcgataaa cacggggata ggggaaatcc cgatcaaact ttccgacgac gggaaagagc
      361 tgtatgtcga acgcaggcag tatgtcaaaa ccgatgcggc gatgaaggac aaaatcatcg
      421 cccatcagaa aaagtgcgga caaacggcac aggcatacct cgacgcgcga aaggcgttgc
      481 cgtcaaacca aacgtatcag cagcgtcagg cggcgatcga gcagttgaaa cggcggtttg
      541 aagccgagtt tgacgaattg gaaaaagaaa tcaaatgcaa cggcaaaccg acattgttgc
      601 tttagcagag gacaaccggg aggatgccgc cgtccgaatc ggacgtgcgg ttttcgtacc
      661 ggtacgggcg ggcaggaatg tccgcttttt ttgttcggac gcgtttgaat acccgtttga
      721 ttccgtccgt ttgcaagggg tatttccgtt cgggcggaaa ttatagtgga t
//
LOCUS       DAWGKF010000259          754 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.259, whole genome shotgun sequence.
ACCESSION   DAWGKF010000259 DAWGKF010000000
VERSION     DAWGKF010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 754)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 754)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.259"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
BASE COUNT          190 a          188 c          200 g          176 t
ORIGIN      
        1 ccctgccgct ccctgtgcta cgcaacggtt gtgtgccttg ggtgggcgcg ggtggcggcc
       61 gggcggtttg ttgctatgat acgggagttc cgatatacaa gggtgggctt cagcccacca
      121 atcaacgacc gaaaaagaaa aaacgttggg ctgaagccca ctctacgcaa ttacgcaact
      181 gttatcgtgg ggatgacggg attttaggtt tttgtttttc tgtttttgcg ggaaggatgg
      241 gttttaggtt gcggtcattt atcggaaaag cagaaatcgc tccgccgtca ttcccgcgaa
      301 agcgggaatc tgaacacgtc cgtagggaaa cctatatccc gtcattccca cgaaagtggg
      361 aatctgaaca cgtccgtagg gaaacctata tcccgtcatt cccacgaaag tgggaatcta
      421 gaacctctga attttcagac aacctttgaa tattgccgcc gtcccgcgtt ctagattccc
      481 gcctgcgcgg gaatgacgat tcatcagttt cccgaaacgc ccgaaaaacc gaaaccgagc
      541 aaaccggatt cccgcctgcg cgggaatgac gatttataag tttcccgaaa cgcccaaaaa
      601 aaccgaaatc cgacaggcgg gatttttgct ttcgtgggga tgacgggatt ttaagttacg
      661 gtcatttatc ggaaaagtag aaatcgctcc gccgtcattc cagcgaaggc gggaatctga
      721 acacgtccgc acggaaacct atagtggatt aaca
//
LOCUS       DAWGKF010000260          683 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.260, whole genome shotgun sequence.
ACCESSION   DAWGKF010000260 DAWGKF010000000
VERSION     DAWGKF010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 683)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 683)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.260"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..>683
                     /gene="mafB"
                     /locus_tag="WHR07_002056"
     CDS             <1..>683
                     /gene="mafB"
                     /locus_tag="WHR07_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HEZ2131210.1"
                     /translation="TGFEGVIGYETHFSGHGHEVHSPFDHHDSKSTSDFSGGVDGGFT
                     VYQLHRTGSEIHPEDGYDGPQGSDYPPPGGARDIYSYHIKGTSTKTKINTVPQAPFSD
                     RWLKENAGAASGFLSRADEAGKLIWENDPNQNWWGNRMDDVRGIIQGAANPFLTGFQG
                     LGVGAITDSAVNPVTYAAARKTLQGIHNLGNLSPEAQLAAATALQDSAFAVKDGINSA
                     KQWADAHPN"
BASE COUNT          199 a          156 c          175 g          153 t
ORIGIN      
        1 ggacagggtt tgaaggtgtt atcggttatg aaacccattt ttcagggcac ggacatgaag
       61 tacacagtcc gttcgatcat catgattcaa aaagcacttc tgatttcagc ggcggtgtag
      121 acggcggttt tactgtttac caacttcatc gaacagggtc ggaaattcat ccggaggatg
      181 gatatgacgg accgcaaggc agcgattatc cgccccccgg aggagcaagg gatatataca
      241 gttaccatat caaaggaact tcaacaaaaa caaagataaa cactgttccg caagccccgt
      301 tttcagaccg ctggctaaaa gaaaatgccg gtgccgcttc cggttttctc agccgtgcgg
      361 atgaagcagg aaaactgata tgggaaaacg accccaatca aaattggtgg ggtaaccgta
      421 tggatgatgt tcgcggcatc atccaaggtg cagccaatcc ttttctaacg ggttttcagg
      481 gattgggagt tggggcaatt acagacagtg cggtaaaccc ggtaacctat gcggcagcac
      541 ggaaaacttt acagggtatt cacaatttag gaaatttaag tccggaagca caacttgcgg
      601 ccgcaaccgc attacaagac agtgcttttg cggtaaaaga cggtatcaac tctgccaaac
      661 aatgggctga tgcccatccg aac
//
LOCUS       DAWGKF010000261          668 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.261, whole genome shotgun sequence.
ACCESSION   DAWGKF010000261 DAWGKF010000000
VERSION     DAWGKF010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 668)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 668)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.261"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(127..>668)
                     /locus_tag="WHR07_002057"
     CDS             complement(127..>668)
                     /locus_tag="WHR07_002057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEZ2131211.1"
                     /translation="SAVESRPAVPAAVQTPVKPAAQPPVQSAPQPAAPAAENKAVPAP
                     APQSPAASPSGTRSVGGIVWQRPTQGKVVADFGGNNKGVDIAGNAGQPVLAAADGKVV
                     YAGSGLRGYGNLVIIQHNSSFLTAYGHNQKLLVGEGQQVKRGQQVALMGNTDASRTQL
                     HFEVRQNGKPVNPNSYIAF"
BASE COUNT          151 a          191 c          186 g          140 t
ORIGIN      
        1 aaacacagtc aaacaaattt atatgcccca tcccttccga ataatttgaa aacacagccg
       61 ccaaaaacaa aaatgccgtc tgaaaacctt tcagacggca tttccaattt gatttcaggc
      121 agaaagtcag aacgcgatat agctgttcgg gttaaccggt ttgccgtttt gccgcacctc
      181 gaaatgaagc tgcgttctgg aagcgtcggt attgcccatc aaagcgacct gctgcccgcg
      241 tttgacctgc tggccttcgc cgaccagcaa tttttggttg tgcccgtatg cggtcaggaa
      301 ggaagaatta tgctggatga tgaccagatt gccgtatccc ctcaaaccgg aacctgcata
      361 aaccactttg ccgtcagccg ccgccaaaac gggctgtccc gcattaccgg caatatcgac
      421 acccttgttg ttgccgccga aatcggcaac cactttacct tgcgtcggac gctgccaaac
      481 aatgccgccg accgaacgcg tgccggaagg cgaagcggca ggagattgcg gggcgggcgc
      541 gggaaccgct ttattttccg cagcgggcgc ggcaggttgc ggcgcggact gcacaggcgg
      601 ttgcgcggcg ggtttcacag gggtttgcac ggcagccggt acggcgggcc tgctttctac
      661 ggctgagg
//
LOCUS       DAWGKF010000262          652 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.262, whole genome shotgun sequence.
ACCESSION   DAWGKF010000262 DAWGKF010000000
VERSION     DAWGKF010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 652)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 652)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.262"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(51..536)
                     /gene="fxsA"
                     /locus_tag="WHR07_002058"
     CDS             complement(51..536)
                     /gene="fxsA"
                     /locus_tag="WHR07_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009349087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein FxsA"
                     /protein_id="HEZ2131212.1"
                     /translation="MRFFGIGFLVLLFLEIMSIVWVADWLGGGWTLFLMAATFAAGVL
                     MLRHTGLSGLLLAGAAMRSGGRVSVYQMLWPIRYTVAAVCLMSPGFVSSVLAVLLLLP
                     FKGGAVLQAGGAENFFNMNQSGRKEGFSRDDDIIEGEYTVEEPYGGNRSRNAIEHKKD
                     E"
BASE COUNT          193 a          211 c          119 g          129 t
ORIGIN      
        1 tcaaaccgga aaaatgccgt ctgaaccttc agacggcatt ccattcacat ttattcgtct
       61 tttttgtgtt cgatggcgtt tcgggaacga ttgccgccgt aaggctcttc aaccgtatat
      121 tccccctcga taatatcgtc atcgcgggaa aagccctctt ttctgcccga ttggttcatg
      181 ttgaaaaaat tttccgcacc tcctgcctgc aacactgcac ctcccttaaa cggcagcagc
      241 agcaataccg ccaacaccga ggatacgaat cccggactca tcagacacac cgccgccacc
      301 gtataacgga taggccacaa catctgataa acggataccc tcccgccgct tctcattgcc
      361 gcacccgcca ataaaagacc ggacagcccc gtatgcctga gcatcagcac accggcggca
      421 aaggttgccg ccatcagaaa cagcgtccaa ccgccgccca gccaatcggc aacccacaca
      481 atcgacataa tctccaaaaa cagcagcacc aaaaaaccga taccgaaaaa tctcattgac
      541 cgtcatcctt atatttaagt aaacagcaaa ccgcccgaac aagactccaa gcgacctgcc
      601 tgtaaatgat tacaaaacca tgtgcttcaa gccgaaacaa tgtgaaatca cg
//
LOCUS       DAWGKF010000263          642 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.263, whole genome shotgun sequence.
ACCESSION   DAWGKF010000263 DAWGKF010000000
VERSION     DAWGKF010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 642)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.263"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..637
                     /locus_tag="WHR07_002059"
     CDS             <1..637
                     /locus_tag="WHR07_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS30-like element IS1655 family transposase"
                     /protein_id="HEZ2131213.1"
                     /translation="IYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVPNRVG
                     IENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICKLDSLKAEDTARA
                     AVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETYFCRPYHSWEKGLNENTNGLI
                     RQYFPKQTDFRNISDREIRRVQDELNHRPRKTLGYETPSVLFLNLFQPLIH"
BASE COUNT          206 a          175 c          139 g          122 t
ORIGIN      
        1 catttaccgc taccttcgcc aagacaaaag caacggcagc acgttgtggc aacatctcag
       61 aatatgcagc aaaccctacc gcaaacgcta cggcagcaca tggaccagag gcaaagtccc
      121 caaccgtgtc ggcatagaaa accgacccgc tatcgtcgac cagaaatccc gtatcggcga
      181 ttgggaagcc gacaccattg tcggcaaagg acagaaaagc gcattattga ccttggtcga
      241 acgcgttacc cgctacacca tcatctgcaa attggatagc ctcaaagccg aagacactgc
      301 ccgggcagct gttagggcat taaaggcaca taaagacagg gtgcacacca ttaccatgga
      361 taacggcaaa gagttctacc aacacaccaa aataaccaaa gcattgaaag cggagactta
      421 tttttgtcgc ccttaccatt cttgggagaa agggctgaat gagaacacca acggactcat
      481 ccggcaatac ttccccaaac aaaccgattt ccgtaacatc agtgatcggg agatacgcag
      541 ggttcaagat gagttgaacc accgaccaag aaaaacactt ggctacgaaa cgccaagtgt
      601 tttattcttg aatctgttcc aaccactaat acactagtgt tg
//
LOCUS       DAWGKF010000264          554 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.264, whole genome shotgun sequence.
ACCESSION   DAWGKF010000264 DAWGKF010000000
VERSION     DAWGKF010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.264"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..106)
                     /locus_tag="WHR07_002060"
     CDS             complement(<1..106)
                     /locus_tag="WHR07_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEZ2131214.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIE"
     gene            complement(227..538)
                     /gene="rpsJ"
                     /locus_tag="WHR07_002061"
     CDS             complement(227..538)
                     /gene="rpsJ"
                     /locus_tag="WHR07_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HEZ2131215.1"
                     /translation="MANQKIRIRLKAYDYALIDRSAQEIVETAKRTGAVVKGPIPLPT
                     KIERFNILRSPHVNKTSREQLEIRTHLRLMDIVDWTDKTTDALMKLDLSAGVDVEIKV
                     Q"
BASE COUNT          141 a          114 c          136 g          163 t
ORIGIN      
        1 gctcgatcgg ctgccaatca atcacttgat ccaacttcaa tagcgggaaa cggtcgatgt
       61 gtttggcaat catggcttgt gcggtttgtt gaaagaaggt gctcatgaga aatcccctaa
      121 atgtcttggt gggaatttag gagattttgg ggaattttgc aaaggtctcg gcataacata
      181 aaaaatcccc aagcattgat tgcttgggga ttttcaatag tccgaattat tggactttga
      241 tttctacatc aacaccggcc gacaaatcca gcttcatcag cgcatcggta gttttatcgg
      301 tccaatccac gatgtccatc aggcgcaagt gggtgcggat ttccaattgt tcacgggaag
      361 ttttgttcac gtgcggagaa cgcaaaatgt tgaaacgctc gattttggtc ggcaaaggaa
      421 tcgggccttt tacaacggca ccggtacgtt ttgcagtttc aacgatttct tgtgcagaac
      481 ggtcaatcag ggcgtaatca taagctttca ggcggatacg gattttttgg tttgccattt
      541 atcaatatcc ttca
//
LOCUS       DAWGKF010000265          545 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.265, whole genome shotgun sequence.
ACCESSION   DAWGKF010000265 DAWGKF010000000
VERSION     DAWGKF010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 545)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 545)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.265"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(464..>545)
                     /locus_tag="WHR07_002062"
     CDS             complement(464..>545)
                     /locus_tag="WHR07_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ2131216.1"
                     /translation="IGRDKLFIHPRLMELLRGEGNSFTSF"
BASE COUNT          149 a           99 c          122 g          175 t
ORIGIN      
        1 taggtttcca tgcggacgcg ttcggattca cgactgcgcg gaaatgacgg gattttggtg
       61 tattccctaa aaaaataaaa aaacatttgc aactttgtta aaaataaagg ctgtgtttta
      121 acgatgtgtt gatatttaat tttagaaagg tagctattta atagttacct tttcttattt
      181 aaaaatagct ttctcaaatt ccatgaacgc ctcaatacga tatgcagatg ctctatcgaa
      241 attaagtttc aacattttgt ttattaaaca ttttatttta gccatttttc aatatacccc
      301 caaatatacc cccaatttgc acaagtcaaa attttaggca ggggttttgt tgctcccatg
      361 atacgcgggc ggatgccggc ttttcgcggg ggaaatacaa ggggtctcgg ttcgggtgtc
      421 aaaatccctg tttcgtgtta gtcatgtggg gggggagagg gggttagaat gaagtaaagc
      481 tgttgccctc tccccgcaat agttccatta ggcgcggatg aatgaatagt ttgtccctgc
      541 cgatg
//
LOCUS       DAWGKF010000266          540 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.266, whole genome shotgun sequence.
ACCESSION   DAWGKF010000266 DAWGKF010000000
VERSION     DAWGKF010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 540)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.266"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..248
                     /locus_tag="WHR07_002063"
     CDS             <1..248
                     /locus_tag="WHR07_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ2131217.1"
                     /translation="DGIMRKACRNRPLTEAQTKRNRYLSKTRYVVEQSFGTLHRKFRY
                     ARAAYFGLIKVSAQSHLKAMCLNLLKAANRLSAPAAA"
     gene            431..>540
                     /locus_tag="WHR07_002064"
     CDS             431..>540
                     /locus_tag="WHR07_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131218.1"
                     /translation="MHLRHILPPTAEALMRSRYSAYVLHLIDYSGLTKTST"
BASE COUNT          138 a          137 c          149 g          116 t
ORIGIN      
        1 tggacggcat tatgcgcaaa gcctgccgca accgtccgct gacggaggca caaaccaaac
       61 gcaaccgata tttgtcgaag acccgttatg tggtcgaaca aagcttcggt acgctgcacc
      121 gtaagttccg ctatgctcgg gcagcctatt tcggactgat taaagtgagt gcgcaaagtc
      181 atctgaaagc gatgtgtttg aacctgttga aagccgccaa caggctaagt gcgcccgctg
      241 ccgcctaaaa agcgaccgga tgcctgatta tcgggtatcc agggaagatt aagggggtat
      301 ttgggtaaaa tcaggaggta tttggggcga aaacagccga aaacagccga aaacctgtgt
      361 ttgggtttcg gctgtcggga gggaaaggaa tgttgcaaag gtctcaagct atgtcggctg
      421 ctgccgccca ttgcaccttc gccatatcct accgcccacc gctgaagccc tcatgcgttc
      481 gcggtacagc gcgtatgtgc tgcaccttat cgactatagt ggattaacaa aaaccagtac
//
LOCUS       DAWGKF010000267          529 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.267, whole genome shotgun sequence.
ACCESSION   DAWGKF010000267 DAWGKF010000000
VERSION     DAWGKF010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 529)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 529)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.267"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..444)
                     /locus_tag="WHR07_002065"
     CDS             complement(<1..444)
                     /locus_tag="WHR07_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEZ2131219.1"
                     /translation="MLKQTTLLAACASFAALLGGCATQQPAPVIAGNSGMQDAPSSAV
                     YNNPYGATPYSPAPVGDAPYVPPVQSAPVYTPPAYVPPSAPAVSGTYVPSYAPVDINA
                     ATHTIVRGDTVYNISKRYHISQDDFRAWNGMTDNTLSIGQIVKVKP"
BASE COUNT          132 a          132 c          154 g          111 t
ORIGIN      
        1 cggtttgact ttaacaatct gaccgatgct caacgtattg tcggtcatgc cgttccacgc
       61 acggaaatcg tcttgagaga tatggtagcg tttggaaatg ttgtacaccg tgtcgccgcg
      121 cacaatagta tgcgtcgccg cgttgatgtc gacgggtgcg taagaaggaa cgtatgtacc
      181 cgaaacggca ggtgcagacg gcggaacata agcaggaggc gtataaaccg gcgcgctttg
      241 caccggcggc acataaggcg catcgccgac aggagccggg ctgtacggcg ttgctccata
      301 ggggttgttg taaactgccg aagacggcgc gtcctgcata cctgaattgc ctgcaatgac
      361 gggggcaggc tgctgggtag cacaaccgcc caacagtgcg gcaaaggagg cgcaagccgc
      421 caaaagtgtc gtttgtttca acataagata accttcatgt tccgatatat agcctgaatg
      481 cggtatatca taataaaaat gcgcgttctt ctcaagcgca aagcccgac
//
LOCUS       DAWGKF010000268          529 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.268, whole genome shotgun sequence.
ACCESSION   DAWGKF010000268 DAWGKF010000000
VERSION     DAWGKF010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 529)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 529)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.268"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..476)
                     /locus_tag="WHR07_002066"
     CDS             complement(<1..476)
                     /locus_tag="WHR07_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEZ2131220.1"
                     /translation="MIASRLSGNISSAIQEHKDGKVNINRFQNILADLYSLGGLGSTL
                     IEKNGNMQSWGIPLAIAGDIIAATAIATGDTGTISTEEFYNFDNWKGFGYELFEDWSR
                     WVYDWLPDGWNLWKELDRNRSGQYHIYDPLALDLDGDGIETVAAKGFSGSLFDHNG"
BASE COUNT          137 a          128 c          104 g          160 t
ORIGIN      
        1 ttgccgttat ggtcgaagag gctgcctgaa aagcctttgg cggcgactgt ttctatgccg
       61 tcgccgtcta ggtctagggc gagggggtcg tagatgtggt attggcctga acggtttctg
      121 tccaattctt tccacagatt ccagccgtcg ggcagccagt cgtataccca acgagaccag
      181 tcttcaaata gctcataccc aaaacctttc cagttgtcaa aattataaaa ttcctctgta
      241 gatatcgtac cagtatctcc tgtggcaata gccgttgctg caattatatc tccagcaatt
      301 gctaatggaa tcccccaact ctgcatattt ccattcttct ctattaatgt acttcctaac
      361 cctcccaatg aatataaatc cgctaaaata ttttgaaaac ggttgatatt aactttacca
      421 tctttatgct cctgaatagc tgaagatata tttccagaga gacggcttgc aatcacagag
      481 gcatttgttc cgtttacaat atgcgatgac gtactacctg gtgcaatat
//
LOCUS       DAWGKF010000269          515 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.269, whole genome shotgun sequence.
ACCESSION   DAWGKF010000269 DAWGKF010000000
VERSION     DAWGKF010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 515)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 515)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.269"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(1..146)
                     /locus_tag="WHR07_002067"
                     /pseudo
     CDS             complement(1..146)
                     /locus_tag="WHR07_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744762.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
     gene            complement(169..354)
                     /locus_tag="WHR07_002068"
     CDS             complement(169..354)
                     /locus_tag="WHR07_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2131221.1"
                     /translation="MGVCLDACCSAAGIARQIGKGGEIHGTLAFSLLFLSLGHIGMVA
                     YHHIKGESVLPRMLGKS"
BASE COUNT          122 a          137 c          132 g          124 t
ORIGIN      
        1 tccactatat tttgatgcag acgtgtaccg atgtagcccg gctgggtttt caggaaatcg
       61 cgtgatttct gccaagcagc caaagtttcg gcttctttgc cctgcggcac ttcaaaggtg
      121 ttgatgagta cagcactgtt ctgcatgatt taaatttaat ccactatatt aagattttcc
      181 gagcattcga ggcagcacgg attcgccttt gatgtggtgg taggcaacca ttccaatgtg
      241 tcccaacgac aaaaacagca atgaaaatgc cagcgtgccg tgaatttctc cgcccttgcc
      301 gatttgacgg gcaatgcctg cggcggaaca gcaagcatca aggcatacgc ccaatgctca
      361 atttggtgac ggcggtgttg gcggggcggt ttttacgttg gcggattccc cacccttgta
      421 tatcggaact cctgtatcat agcaacaaac cgcccgaccg ccacccgcgc ccaccaaaag
      481 cagacaaccg ttgcgtagct cagggagcgg caggg
//
LOCUS       DAWGKF010000270          504 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27804
            SAMN09011441-rid17420283.denovo.270, whole genome shotgun sequence.
ACCESSION   DAWGKF010000270 DAWGKF010000000
VERSION     DAWGKF010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011441
            Sequence Read Archive: SRR7106890
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 504)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 504)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001660142.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001660142.1
            Genome Coverage       :: 152x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:45:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,069
            CDSs (total)                      :: 2,017
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 31 of 77
            Pseudo Genes (incomplete)         :: 42 of 77
            Pseudo Genes (internal stop)      :: 12 of 77
            Pseudo Genes (multiple problems)  :: 8 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011441-rid17420283.denovo.270"
                     /isolate="M27804"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..378)
                     /locus_tag="WHR07_002069"
     CDS             complement(<1..378)
                     /locus_tag="WHR07_002069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ2131222.1"
                     /translation="MKYRRFYRNGGTYFFTVVTNKRQKILTDDAVRLALRQAVMAVRE
                     RYPFEILAWVLMPDHLHTIWRLPDNDSAYSERWRQIKRHSQYLIGGNLRLWQKRFWEY
                     TIRDEADFAWHFDYLHFNPVKHGY"
BASE COUNT          138 a          117 c          116 g          133 t
ORIGIN      
        1 atagccatgt ttgaccggat tgaaatgcag ataatcaaaa tgccaggcaa aatcggcctc
       61 atcgcggata gtatattccc aaaagcgttt ttgccaaagc ctgagattgc cgccgattaa
      121 atattggctg tgccgcttga tttgccgcca gcgttccgaa taagcagaat cattgtccgg
      181 cagccgccat atggtatgca gatggtcggg catcaacacc catgccaaaa tttcaaacgg
      241 ataccgttcg cgcaccgcca ttaccgcctg ccgtaaagcc aaacgcaccg catcatcggt
      301 caaaatcttc tgccgtttat tggttacaac cgtaaaaaag taagtgccgc cattgcggta
      361 aaaacgacgg tatttcatag tattatgctc ggaatgattt tgtaggtcgg attcttgaat
      421 tcgacatttt gggcattgct gcaatggatt gcaatgatgg gaatgttaaa ggttttgtcg
      481 gatacaagta tccgacctac gctt
//
